Corvus hawaiiensis isolate bCorHaw1 chromosome 24, bCorHaw1.pri.cur, whole genome shotgun sequence.
type: Entry
definition: Corvus hawaiiensis isolate bCorHaw1 chromosome 24, bCorHaw1.pri.cur, whole genome shotgun sequence.
sequence version: NC_063236.1
sequence date: 2022-05-19
sequence: sequence
division: CON
label: NC_063236.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA838000
dblink: SAMN22550278
keyword: WGS
keyword: RefSeq
source: Corvus hawaiiensis (hawaiian crow)
organism: Corvus hawaiiensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM036369.1.\nAssembly name: bCorHaw1.pri.cur\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/04. The original whole-genome shotgun project has the\naccession JAJGSY000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-SEP-2021\nAssembly Method :: HiFiasm v. 0.15.4+galaxy; purge_dups v.\n 1.2.5+galaxy3; Bionano Solve v.\n 3.6.1+galaxy2; Salsa v. 2.3+galaxy0;\n gEVAL manual curation v. 2021-09-20; VGP\n pipeline v. 2.0\nAssembly Name :: bCorHaw1.pri.cur\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 29.61x\nSequencing Technology :: PacBio Sequel II HiFi; Illumina NovaSeq;\n Bionano Genomics Saphyr DLS; Arima\n Genomics Hi-C v2\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus hawaiiensis Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 11344391
topology: linear
so has quality: SO_0000987
location: 1..11344391
location: region:1-11344391:1
RO_0002162: 134902

NC_063236
type: RefSeq
SIO_000068: refseq

PRJNA838000
type: BioProject
SIO_000068: bioproject

SAMN22550278
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11344391:1
position: 11344391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11344391:1:source
so part of: sequence
organism: Corvus hawaiiensis
mol type: genomic DNA
isolate: bCorHaw1
chromosome: 24
sex: female
tissue type: blood
dev stage: adult
country: USA: University of Hawaii at Manoa
lat lon: 21.297467 N 157.818261 W
collection date: 2020-08-08
collected by: Bryce Masuda

134902
type: Taxonomy
SIO_000068: taxonomy

LOC125338027
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125338027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16834..18165)
location: region:16834-18165:-1
so has part: feature:16834-18165:-1:exon
subclass of: SO_0000011

125338027
type: Gene
SIO_000068: ncbigene

position:16834:-1
position: 16834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18165:-1
position: 18165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16834-18165:-1:exon

LOC125338027
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125338027
product: uncharacterized LOC125338027
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007208167.1
SIO_010081: LOC125338027
subclass of: SO_0000673
so part of: LOC125338027
location: complement(join(16834..16875,16926..16985,17184..17193,18075..18165))
location: region:16834-18165:-1
so has part: feature:18075-18165:-1:exon
so has part: feature:17184-17193:-1:exon
so has part: feature:16926-16985:-1:exon
so has part: feature:16834-16875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18075-18165:-1:exon

position:18075:-1
position: 18075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17184-17193:-1:exon

position:17184:-1
position: 17184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17193:-1
position: 17193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16926-16985:-1:exon

position:16926:-1
position: 16926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16985:-1
position: 16985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16834-16875:-1:exon

position:16875:-1
position: 16875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125337938
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(25944..30361)
location: region:25944-30361:-1
so has part: feature:25944-30361:-1:exon
subclass of: SO_0000010

125337938
type: Gene
SIO_000068: ncbigene

position:25944:-1
position: 25944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30361:-1
position: 30361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25944-30361:-1:exon

LOC125337938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125337938
product: zinc finger protein 629-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328209.1
SIO_010081: LOC125337938
subclass of: SO_0000673
so part of: LOC125337938
location: complement(join(25944..28008,28352..28444,28968..29025,30107..30361))
location: region:25944-30361:-1
so has part: feature:30107-30361:-1:exon
so has part: feature:28968-29025:-1:exon
so has part: feature:28352-28444:-1:exon
so has part: feature:25944-28008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30107-30361:-1:exon

position:30107:-1
position: 30107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28968-29025:-1:exon

position:28968:-1
position: 28968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29025:-1
position: 29025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28352-28444:-1:exon

position:28352:-1
position: 28352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28444:-1
position: 28444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25944-28008:-1:exon

position:28008:-1
position: 28008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125337938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125337938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 629-like
translation: MGRRERGPPLRKLGDPPPNLGYPRSWIWDGGGDDGDGLGGRRRLWGGRGEERAGTPPQKIWEAPPPQFGIPPGLDLILGAESGAAARPPEIPPRAVPLEAPMEQEEPDVVELQDSDEGDVVRRVFIADDGIVSDGEAEVLPHEIIRTVIPHSPLRPPPPRSTPGPAPGGSEEGGGAAGWGAASAPSSATSAARASATGPSCCWHQRTHTGERPSTCGECGKSFSQNSHLVQHRRTHTGEKPYRCGHCGKSFSWSSNLIQHQRIHTGERPYGCAECGKSFTQSKNLIKHQRTHAGPGAARAAALCPPHGRPEGAEGAAGRGRGARRGRGPRTGASDLRGVRGRASRGVPRSGDTAGGHRPLFVP
SIO_010081: LOC125337938
subclass of: SO_0000673
so part of: LOC125337938
location: complement(join(27296..28008,28352..28444,28968..29025,30107..30334))
location: region:27296-30334:-1
so has part: feature:30107-30334:-1:exon
so has part: feature:28968-29025:-1:exon
so has part: feature:28352-28444:-1:exon
so has part: feature:27296-28008:-1:exon

XP_048184166.1
type: Protein
SIO_000068: ncbiprotein

position:27296:-1
position: 27296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30334:-1
position: 30334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30107-30334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28968-29025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28352-28444:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27296-28008:-1:exon

RNF212B
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: RNF212B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 30827..35645
location: region:30827-35645:1
so has part: feature:30827-35645:1:exon
subclass of: SO_0000010

125337939
type: Gene
SIO_000068: ncbigene

position:30827:1
position: 30827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35645:1
position: 35645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30827-35645:1:exon

RNF212B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: RNF212B
product: ring finger protein 212B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048328210.1
SIO_010081: RNF212B
subclass of: SO_0000673
so part of: RNF212B
location: join(30827..31488,32659..32802,33185..33237,33352..33426,33523..33638,33937..33985,34070..34133,34243..34285,34373..34424,34502..34550,34964..34995,35508..35645)
location: region:30827-35645:1
so has part: feature:30827-31488:1:exon
so has part: feature:32659-32802:1:exon
so has part: feature:33185-33237:1:exon
so has part: feature:33352-33426:1:exon
so has part: feature:33523-33638:1:exon
so has part: feature:33937-33985:1:exon
so has part: feature:34070-34133:1:exon
so has part: feature:34243-34285:1:exon
so has part: feature:34373-34424:1:exon
so has part: feature:34502-34550:1:exon
so has part: feature:34964-34995:1:exon
so has part: feature:35508-35645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30827-31488:1:exon

position:31488:1
position: 31488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32659-32802:1:exon

position:32659:1
position: 32659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32802:1
position: 32802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:33185-33237:1:exon

position:33185:1
position: 33185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33237:1
position: 33237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:33352-33426:1:exon

position:33352:1
position: 33352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33426:1
position: 33426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33523-33638:1:exon

position:33523:1
position: 33523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33638:1
position: 33638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:33937-33985:1:exon

position:33937:1
position: 33937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33985:1
position: 33985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:34070-34133:1:exon

position:34070:1
position: 34070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34133:1
position: 34133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:34243-34285:1:exon

position:34243:1
position: 34243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34285:1
position: 34285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:34373-34424:1:exon

position:34373:1
position: 34373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34424:1
position: 34424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:34502-34550:1:exon

position:34502:1
position: 34502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34550:1
position: 34550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:34964-34995:1:exon

position:34964:1
position: 34964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34995:1
position: 34995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:35508-35645:1:exon

position:35508:1
position: 35508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF212B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: RNF212B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 212B
translation: MDWFHCSRCFRQDGARFAITNCGHILCEGCGGTGPCPVCATACRYLPLSQQMRPQEKVFFKSPVAIALKHLAHVTQVWRFQLAQAQLLLDLQRDRARWAQAELEKAREELGERRRELESLRRENAELRRIQLSPGWRWSSHSSTARPSPTQSVTPQPRQQLSSQVVSRSAPLEPPRSRSTPRWQVGVAYRDAGTPLASSVVPPLAGRREGQGSALRPARGERSQWDPNPQP
SIO_010081: RNF212B
subclass of: SO_0000673
so part of: RNF212B
location: join(32703..32802,33185..33237,33352..33426,33523..33638,33937..33985,34070..34133,34243..34285,34373..34424,34502..34550,34964..34995,35508..35570)
location: region:32703-35570:1
so has part: feature:32703-32802:1:exon
so has part: feature:33185-33237:1:exon
so has part: feature:33352-33426:1:exon
so has part: feature:33523-33638:1:exon
so has part: feature:33937-33985:1:exon
so has part: feature:34070-34133:1:exon
so has part: feature:34243-34285:1:exon
so has part: feature:34373-34424:1:exon
so has part: feature:34502-34550:1:exon
so has part: feature:34964-34995:1:exon
so has part: feature:35508-35570:1:exon

XP_048184167.1
type: Protein
SIO_000068: ncbiprotein

position:32703:1
position: 32703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35570:1
position: 35570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32703-32802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33185-33237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33352-33426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33523-33638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33937-33985:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34070-34133:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34243-34285:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34373-34424:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34502-34550:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34964-34995:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:35508-35570:1:exon

ASB8
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ASB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 36073..38657
location: region:36073-38657:1
so has part: feature:36073-38657:1:exon
subclass of: SO_0000010

125337816
type: Gene
SIO_000068: ncbigene

position:36073:1
position: 36073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38657:1
position: 38657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36073-38657:1:exon

ASB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ASB8
product: ankyrin repeat and SOCS box containing 8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327975.1
SIO_010081: ASB8
subclass of: SO_0000673
so part of: ASB8
location: join(36073..36435,36972..37076,37672..38657)
location: region:36073-38657:1
so has part: feature:36073-36435:1:exon
so has part: feature:36972-37076:1:exon
so has part: feature:37672-38657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36073-36435:1:exon

position:36435:1
position: 36435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36972-37076:1:exon

position:36972:1
position: 36972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37076:1
position: 37076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37672-38657:1:exon

position:37672:1
position: 37672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ASB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 8
translation: MWYIMQSIQSKYSLSERLIRTIAAIRSFPRDNVEDLIGRGADVNCLHGTLKPLHCACMVADADCVELLLQKGAEVNALDGYNRTALHYAAEKDETCVEILLEYGANPNALDGNKDTPLHWAAFKNNAECVRALLANGALVNALDYNNDTPLSWAAMKGNLESVSVLLDFGAEVRVVNLKGQSPISRLVALLVRGLGTEREDSCLDLLHRATGHFELRKNGSLPWEVARDPQLCQRLTRLCSAPGTLQALSRYAVRRSLGLRFLPQAVQQLPLPACLKEYLLLLT
SIO_010081: ASB8
subclass of: SO_0000673
so part of: ASB8
location: join(36319..36435,36972..37076,37672..38304)
location: region:36319-38304:1
so has part: feature:36319-36435:1:exon
so has part: feature:36972-37076:1:exon
so has part: feature:37672-38304:1:exon

XP_048183932.1
type: Protein
SIO_000068: ncbiprotein

position:36319:1
position: 36319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38304:1
position: 38304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36319-36435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36972-37076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37672-38304:1:exon

PFKM
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: PFKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(39261..47564)
location: region:39261-47564:-1
so has part: feature:39261-47564:-1:exon
subclass of: SO_0000010

125337814
type: Gene
SIO_000068: ncbigene

position:39261:-1
position: 39261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47564:-1
position: 47564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39261-47564:-1:exon

PFKM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: PFKM
product: phosphofructokinase, muscle
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327972.1
SIO_010081: PFKM
subclass of: SO_0000673
so part of: PFKM
location: complement(join(39261..39600,39721..39826,40093..40192,40359..40470,40832..40893,41072..41236,41649..41801,41888..41975,42053..42123,42852..42998,43432..43495,43577..43641,43849..43974,44058..44150,44254..44349,44464..44572,44658..44702,44982..45147,45672..45861,46212..46289,46381..46454,47356..47564))
location: region:39261-47564:-1
so has part: feature:47356-47564:-1:exon
so has part: feature:46381-46454:-1:exon
so has part: feature:46212-46289:-1:exon
so has part: feature:45672-45861:-1:exon
so has part: feature:44982-45147:-1:exon
so has part: feature:44658-44702:-1:exon
so has part: feature:44464-44572:-1:exon
so has part: feature:44254-44349:-1:exon
so has part: feature:44058-44150:-1:exon
so has part: feature:43849-43974:-1:exon
so has part: feature:43577-43641:-1:exon
so has part: feature:43432-43495:-1:exon
so has part: feature:42852-42998:-1:exon
so has part: feature:42053-42123:-1:exon
so has part: feature:41888-41975:-1:exon
so has part: feature:41649-41801:-1:exon
so has part: feature:41072-41236:-1:exon
so has part: feature:40832-40893:-1:exon
so has part: feature:40359-40470:-1:exon
so has part: feature:40093-40192:-1:exon
so has part: feature:39721-39826:-1:exon
so has part: feature:39261-39600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47356-47564:-1:exon

position:47356:-1
position: 47356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46381-46454:-1:exon

position:46381:-1
position: 46381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46454:-1
position: 46454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46212-46289:-1:exon

position:46212:-1
position: 46212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46289:-1
position: 46289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45672-45861:-1:exon

position:45672:-1
position: 45672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45861:-1
position: 45861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44982-45147:-1:exon

position:44982:-1
position: 44982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45147:-1
position: 45147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:44658-44702:-1:exon

position:44658:-1
position: 44658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44702:-1
position: 44702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44464-44572:-1:exon

position:44464:-1
position: 44464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44572:-1
position: 44572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:44254-44349:-1:exon

position:44254:-1
position: 44254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44349:-1
position: 44349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44058-44150:-1:exon

position:44058:-1
position: 44058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44150:-1
position: 44150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:43849-43974:-1:exon

position:43849:-1
position: 43849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43974:-1
position: 43974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:43577-43641:-1:exon

position:43577:-1
position: 43577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43641:-1
position: 43641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:43432-43495:-1:exon

position:43432:-1
position: 43432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43495:-1
position: 43495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:42852-42998:-1:exon

position:42852:-1
position: 42852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42998:-1
position: 42998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:42053-42123:-1:exon

position:42053:-1
position: 42053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42123:-1
position: 42123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:41888-41975:-1:exon

position:41888:-1
position: 41888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41975:-1
position: 41975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:41649-41801:-1:exon

position:41649:-1
position: 41649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41801:-1
position: 41801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:41072-41236:-1:exon

position:41072:-1
position: 41072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41236:-1
position: 41236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:40832-40893:-1:exon

position:40832:-1
position: 40832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40893:-1
position: 40893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:40359-40470:-1:exon

position:40359:-1
position: 40359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40470:-1
position: 40470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:40093-40192:-1:exon

position:40093:-1
position: 40093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40192:-1
position: 40192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:39721-39826:-1:exon

position:39721:-1
position: 39721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39826:-1
position: 39826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:39261-39600:-1:exon

position:39600:-1
position: 39600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PFKM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: PFKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent 6-phosphofructokinase, muscle type
translation: MPQSPAGPRHPETLGVGKAIAVLTSGGDAQGMNAAVRAVVRVGIYTGAKVFFVYEGYQGLVDGGDHIKEATWESVSMMLQLGGTVIGSARCQDFRTREGRLRAARNLAKHGITNLCVIGGDGSLTGADTFRAEWSGLVAELVKTGGITAEEAQRSSHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIMEIVDAITTTAQSHQRTFVLEVMGRHCGYLALITALASGADWVFIPESPPEDDWEEHLCRRLAETRDGGSRLNIIIVAEGAIDKHGKAITSDNIKDLVVKRLGYDTRVTILGHVQRGGTPSAFDRILGSRMGVEAVMALLEGTPDTPACVVSLSGNQAVRLPLMECVQVTKDVTTAMNEGRFEDALKLRGRSFQNNWDVYKLLAHIRPPTTKSGYTLAVLNVGAPAAGMNAAVRATVRIGLIHGHRVLAVHDGFEGLAFGMVEEISWNAVGSWTGLGGSKLGTKRTLPKKYFEEISANISKFGIHALIIIGGFEAFTGGLELVEGRARFEELCIPLCIIPATVSNNVPGSDFSIGADTALNTITTTCDLIKQSAAGTKRRVFIIETMGGFCGYLATMAGLAAGADAAYIYEEPFSSRDLQANVDHLIEKMKTTVKRGLVLRNERCNENYTTDFIYNLYSEEGKGVFDCRKNILGHMQQGGSPTPFDRNFGTKMGAKAVAWITGKIKECSRHGRIFANTADSACLLGMRKRSLVFQPITELRQQTDFEHRIPKEQWWLRLRPILKILAKYNIELDTSETAHLEHLTRKVLVPEATL
SIO_010081: PFKM
subclass of: SO_0000673
so part of: PFKM
location: complement(join(39453..39600,39721..39826,40093..40192,40359..40470,40832..40893,41072..41236,41649..41801,41888..41975,42053..42123,42852..42998,43432..43495,43577..43641,43849..43974,44058..44150,44254..44349,44464..44572,44658..44702,44982..45147,45672..45861,46212..46289,46381..46454,47356..47446))
location: region:39453-47446:-1
so has part: feature:47356-47446:-1:exon
so has part: feature:46381-46454:-1:exon
so has part: feature:46212-46289:-1:exon
so has part: feature:45672-45861:-1:exon
so has part: feature:44982-45147:-1:exon
so has part: feature:44658-44702:-1:exon
so has part: feature:44464-44572:-1:exon
so has part: feature:44254-44349:-1:exon
so has part: feature:44058-44150:-1:exon
so has part: feature:43849-43974:-1:exon
so has part: feature:43577-43641:-1:exon
so has part: feature:43432-43495:-1:exon
so has part: feature:42852-42998:-1:exon
so has part: feature:42053-42123:-1:exon
so has part: feature:41888-41975:-1:exon
so has part: feature:41649-41801:-1:exon
so has part: feature:41072-41236:-1:exon
so has part: feature:40832-40893:-1:exon
so has part: feature:40359-40470:-1:exon
so has part: feature:40093-40192:-1:exon
so has part: feature:39721-39826:-1:exon
so has part: feature:39453-39600:-1:exon

XP_048183929.1
type: Protein
SIO_000068: ncbiprotein

position:39453:-1
position: 39453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47446:-1
position: 47446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47356-47446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46381-46454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46212-46289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45672-45861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44982-45147:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44658-44702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44464-44572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44254-44349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44058-44150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43849-43974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:43577-43641:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:43432-43495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:42852-42998:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:42053-42123:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:41888-41975:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:41649-41801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:41072-41236:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:40832-40893:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:40359-40470:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:40093-40192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:39721-39826:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:39453-39600:-1:exon

SENP1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SENP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 49492..60290
location: region:49492-60290:1
so has part: feature:49492-60290:1:exon
subclass of: SO_0000010

125337815
type: Gene
SIO_000068: ncbigene

position:49492:1
position: 49492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60290:1
position: 60290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49492-60290:1:exon

SENP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SENP1
product: SUMO specific peptidase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327973.1
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: join(49492..50054,50824..50896,51006..51105,51496..51631,52080..52183,52560..52795,53038..53092,53261..53299,53411..53495,54071..54223,55784..55915,56377..56580,57309..57388,57788..57872,58451..58546,59025..60290)
location: region:49492-60290:1
so has part: feature:49492-50054:1:exon
so has part: feature:50824-50896:1:exon
so has part: feature:51006-51105:1:exon
so has part: feature:51496-51631:1:exon
so has part: feature:52080-52183:1:exon
so has part: feature:52560-52795:1:exon
so has part: feature:53038-53092:1:exon
so has part: feature:53261-53299:1:exon
so has part: feature:53411-53495:1:exon
so has part: feature:54071-54223:1:exon
so has part: feature:55784-55915:1:exon
so has part: feature:56377-56580:1:exon
so has part: feature:57309-57388:1:exon
so has part: feature:57788-57872:1:exon
so has part: feature:58451-58546:1:exon
so has part: feature:59025-60290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49492-50054:1:exon

position:50054:1
position: 50054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50824-50896:1:exon

position:50824:1
position: 50824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50896:1
position: 50896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:51006-51105:1:exon

position:51006:1
position: 51006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51105:1
position: 51105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51496-51631:1:exon

position:51496:1
position: 51496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51631:1
position: 51631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:52080-52183:1:exon

position:52080:1
position: 52080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52183:1
position: 52183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:52560-52795:1:exon

position:52560:1
position: 52560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52795:1
position: 52795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:53038-53092:1:exon

position:53038:1
position: 53038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53092:1
position: 53092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:53261-53299:1:exon

position:53261:1
position: 53261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53299:1
position: 53299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:53411-53495:1:exon

position:53411:1
position: 53411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53495:1
position: 53495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:54071-54223:1:exon

position:54071:1
position: 54071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54223:1
position: 54223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:55784-55915:1:exon

position:55784:1
position: 55784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55915:1
position: 55915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:56377-56580:1:exon

position:56377:1
position: 56377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56580:1
position: 56580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:57309-57388:1:exon

position:57309:1
position: 57309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57388:1
position: 57388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:57788-57872:1:exon

position:57788:1
position: 57788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57872:1
position: 57872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:58451-58546:1:exon

position:58451:1
position: 58451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58546:1
position: 58546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:59025-60290:1:exon

position:59025:1
position: 59025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SENP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SENP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 1
translation: MRMEAREAVRARPGPAFPSKFFPPKLSSFSCPAGNSSCSLSYAPETPGERFPGANGQWRSSKPRGSRASFLETRKTSSGNSGTFVGKSALHGASFPLKPAPSPSWSRRSPKKAPRRFLSAAEETVREEEREIYRQLLQMVTGKRFSSSKPSPLLPFHLSRCPRSGPSLPQEAPRDDPEALEIPKISGPLPRPPEPPRNSQNPPLGPSPGYPGGFQPQNSTVQEQQEEQAASSAHTEGSDSVILLKVKDSRTPAPSLPFFQAELWIKELTSVYDSRARERWRQIEEQKALALQLQSQRLQERQRSGQELVELQLRVPLEKEIPVTAAPQGPERGREPEGDEEFPEITEEMEKEIKSLFRGGNQDEVLSEAFRLTITRKDIQTLNNLNWLNDEIINFYMNLLMERSKEKDLPAVHAFNTFFFTKLKTAGYQAVKRWTKKVDIFSVDLLLVPIHLGVHWCLAVVDFRKKTITYYDSMGGINSEACRILLQYLKQESLDKKRKEFDTNGWALLSKKSQEIPQQMNGSDCGMFACRYAECISKDKPINFTQQHMPYFRKRMAWEILHRKLL
SIO_010081: SENP1
subclass of: SO_0000673
so part of: SENP1
location: join(49995..50054,50824..50896,51006..51105,51496..51631,52080..52183,52560..52795,53038..53092,53261..53299,53411..53495,54071..54223,55784..55915,56377..56580,57309..57388,57788..57872,58451..58546,59025..59087)
location: region:49995-59087:1
so has part: feature:49995-50054:1:exon
so has part: feature:50824-50896:1:exon
so has part: feature:51006-51105:1:exon
so has part: feature:51496-51631:1:exon
so has part: feature:52080-52183:1:exon
so has part: feature:52560-52795:1:exon
so has part: feature:53038-53092:1:exon
so has part: feature:53261-53299:1:exon
so has part: feature:53411-53495:1:exon
so has part: feature:54071-54223:1:exon
so has part: feature:55784-55915:1:exon
so has part: feature:56377-56580:1:exon
so has part: feature:57309-57388:1:exon
so has part: feature:57788-57872:1:exon
so has part: feature:58451-58546:1:exon
so has part: feature:59025-59087:1:exon

XP_048183930.1
type: Protein
SIO_000068: ncbiprotein

position:49995:1
position: 49995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59087:1
position: 59087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49995-50054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50824-50896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51006-51105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51496-51631:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52080-52183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52560-52795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:53038-53092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:53261-53299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:53411-53495:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:54071-54223:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55784-55915:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:56377-56580:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:57309-57388:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:57788-57872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:58451-58546:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:59025-59087:1:exon

LOC125337951
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 68425..87608
location: region:68425-87608:1
so has part: feature:68425-87608:1:exon
subclass of: SO_0000010

125337951
type: Gene
SIO_000068: ncbigene

position:68425:1
position: 68425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87608:1
position: 87608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68425-87608:1:exon

LOC125337951
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125337951
product: collagen alpha-1(II) chain-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
transcript id: XM_048328234.1
SIO_010081: LOC125337951
subclass of: SO_0000673
so part of: LOC125337951
location: join(68425..68601,70329..70529,71356..71372,71646..71678,71793..71824,71945..71998,72206..72308,72735..72812,73066..73111,73195..73249,73339..73395,73510..73564,73657..73709,73798..73851,74029..74073,74174..74227,74335..74379,74498..74551,74630..74729,74858..74903,75449..75546,76034..76087,76678..76785,77015..77068,77175..77273,77811..77864,77949..78047,78138..78191,78340..78393,78686..78739,78875..78928,79020..79064,79248..79346,79433..79540,79629..79682,79873..79926,80031..80084,80200..80253,80343..80450,80569..80622,80714..80767,81243..81404,81485..81592,82501..82608,82788..82841,82981..83088,83429..83482,83589..83697,83886..83939,84215..84322,84872..85161,85420..85607,86343..86585,86917..87608)
location: region:68425-87608:1
so has part: feature:68425-68601:1:exon
so has part: feature:70329-70529:1:exon
so has part: feature:71356-71372:1:exon
so has part: feature:71646-71678:1:exon
so has part: feature:71793-71824:1:exon
so has part: feature:71945-71998:1:exon
so has part: feature:72206-72308:1:exon
so has part: feature:72735-72812:1:exon
so has part: feature:73066-73111:1:exon
so has part: feature:73195-73249:1:exon
so has part: feature:73339-73395:1:exon
so has part: feature:73510-73564:1:exon
so has part: feature:73657-73709:1:exon
so has part: feature:73798-73851:1:exon
so has part: feature:74029-74073:1:exon
so has part: feature:74174-74227:1:exon
so has part: feature:74335-74379:1:exon
so has part: feature:74498-74551:1:exon
so has part: feature:74630-74729:1:exon
so has part: feature:74858-74903:1:exon
so has part: feature:75449-75546:1:exon
so has part: feature:76034-76087:1:exon
so has part: feature:76678-76785:1:exon
so has part: feature:77015-77068:1:exon
so has part: feature:77175-77273:1:exon
so has part: feature:77811-77864:1:exon
so has part: feature:77949-78047:1:exon
so has part: feature:78138-78191:1:exon
so has part: feature:78340-78393:1:exon
so has part: feature:78686-78739:1:exon
so has part: feature:78875-78928:1:exon
so has part: feature:79020-79064:1:exon
so has part: feature:79248-79346:1:exon
so has part: feature:79433-79540:1:exon
so has part: feature:79629-79682:1:exon
so has part: feature:79873-79926:1:exon
so has part: feature:80031-80084:1:exon
so has part: feature:80200-80253:1:exon
so has part: feature:80343-80450:1:exon
so has part: feature:80569-80622:1:exon
so has part: feature:80714-80767:1:exon
so has part: feature:81243-81404:1:exon
so has part: feature:81485-81592:1:exon
so has part: feature:82501-82608:1:exon
so has part: feature:82788-82841:1:exon
so has part: feature:82981-83088:1:exon
so has part: feature:83429-83482:1:exon
so has part: feature:83589-83697:1:exon
so has part: feature:83886-83939:1:exon
so has part: feature:84215-84322:1:exon
so has part: feature:84872-85161:1:exon
so has part: feature:85420-85607:1:exon
so has part: feature:86343-86585:1:exon
so has part: feature:86917-87608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68425-68601:1:exon

position:68601:1
position: 68601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70329-70529:1:exon

position:70329:1
position: 70329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70529:1
position: 70529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71356-71372:1:exon

position:71356:1
position: 71356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71372:1
position: 71372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:71646-71678:1:exon

position:71646:1
position: 71646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71678:1
position: 71678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:71793-71824:1:exon

position:71793:1
position: 71793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71824:1
position: 71824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:71945-71998:1:exon

position:71945:1
position: 71945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71998:1
position: 71998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:72206-72308:1:exon

position:72206:1
position: 72206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72308:1
position: 72308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:72735-72812:1:exon

position:72735:1
position: 72735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72812:1
position: 72812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:73066-73111:1:exon

position:73066:1
position: 73066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73111:1
position: 73111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:73195-73249:1:exon

position:73195:1
position: 73195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73249:1
position: 73249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:73339-73395:1:exon

position:73339:1
position: 73339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73395:1
position: 73395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:73510-73564:1:exon

position:73510:1
position: 73510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73564:1
position: 73564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:73657-73709:1:exon

position:73657:1
position: 73657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73709:1
position: 73709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:73798-73851:1:exon

position:73798:1
position: 73798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73851:1
position: 73851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:74029-74073:1:exon

position:74029:1
position: 74029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74073:1
position: 74073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:74174-74227:1:exon

position:74174:1
position: 74174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74227:1
position: 74227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:74335-74379:1:exon

position:74335:1
position: 74335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74379:1
position: 74379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:74498-74551:1:exon

position:74498:1
position: 74498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74551:1
position: 74551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:74630-74729:1:exon

position:74630:1
position: 74630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74729:1
position: 74729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:74858-74903:1:exon

position:74858:1
position: 74858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74903:1
position: 74903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:75449-75546:1:exon

position:75449:1
position: 75449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75546:1
position: 75546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:76034-76087:1:exon

position:76034:1
position: 76034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76087:1
position: 76087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:76678-76785:1:exon

position:76678:1
position: 76678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76785:1
position: 76785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:77015-77068:1:exon

position:77015:1
position: 77015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77068:1
position: 77068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:77175-77273:1:exon

position:77175:1
position: 77175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77273:1
position: 77273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:77811-77864:1:exon

position:77811:1
position: 77811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77864:1
position: 77864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:77949-78047:1:exon

position:77949:1
position: 77949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78047:1
position: 78047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:78138-78191:1:exon

position:78138:1
position: 78138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78191:1
position: 78191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:78340-78393:1:exon

position:78340:1
position: 78340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78393:1
position: 78393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:78686-78739:1:exon

position:78686:1
position: 78686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78739:1
position: 78739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:78875-78928:1:exon

position:78875:1
position: 78875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78928:1
position: 78928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:79020-79064:1:exon

position:79020:1
position: 79020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79064:1
position: 79064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:79248-79346:1:exon

position:79248:1
position: 79248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79346:1
position: 79346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:79433-79540:1:exon

position:79433:1
position: 79433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79540:1
position: 79540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:79629-79682:1:exon

position:79629:1
position: 79629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79682:1
position: 79682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:79873-79926:1:exon

position:79873:1
position: 79873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79926:1
position: 79926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:80031-80084:1:exon

position:80031:1
position: 80031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80084:1
position: 80084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:80200-80253:1:exon

position:80200:1
position: 80200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80253:1
position: 80253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:80343-80450:1:exon

position:80343:1
position: 80343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80450:1
position: 80450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:80569-80622:1:exon

position:80569:1
position: 80569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80622:1
position: 80622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:80714-80767:1:exon

position:80714:1
position: 80714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80767:1
position: 80767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:81243-81404:1:exon

position:81243:1
position: 81243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81404:1
position: 81404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:81485-81592:1:exon

position:81485:1
position: 81485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81592:1
position: 81592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:82501-82608:1:exon

position:82501:1
position: 82501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82608:1
position: 82608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:82788-82841:1:exon

position:82788:1
position: 82788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82841:1
position: 82841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:82981-83088:1:exon

position:82981:1
position: 82981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83088:1
position: 83088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:83429-83482:1:exon

position:83429:1
position: 83429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83482:1
position: 83482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:83589-83697:1:exon

position:83589:1
position: 83589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83697:1
position: 83697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:83886-83939:1:exon

position:83886:1
position: 83886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83939:1
position: 83939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:84215-84322:1:exon

position:84215:1
position: 84215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84322:1
position: 84322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:84872-85161:1:exon

position:84872:1
position: 84872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85161:1
position: 85161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:85420-85607:1:exon

position:85420:1
position: 85420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85607:1
position: 85607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:86343-86585:1:exon

position:86343:1
position: 86343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86585:1
position: 86585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:86917-87608:1:exon

position:86917:1
position: 86917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125337951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125337951
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: collagen alpha-1(II) chain-like
translation: MPGHRPAPGGRRSEPVATGRVPAATGAAPRPPLLLLLLLCLAAAAAAQDRDLPEAGSCLQDGHRYSDKDVWKPEPCRICVCDTGTVLCDEITCEELRDCPSPEIPFGECCPICPSEQPSGQPGPKGQKGEPGDIKDVVGPRGPPAHRAPQVSRDSEETAARRGRRVPPVPGAGMGNPELQEIPAPPAPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPLRLPWSPRIPRQPRRTRRAWRCWSDGSPGTSRTSWKTRGVTTVRPANPGNPASAAPPGPQGARGFPGTPACLESKATGATRAWTVPKERRERPEPRASPAPRVRTAPPAPWVPVGCLESEDAPAPRALRALVATTASLAQPDPPVPSAQQEPPASPVPLAPRVKQVPQERGDPRVPRGPAENPGPPARPAPAGAPGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPAGEPGREGSPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPGRYMRADEAAPGLRPHDAEVDATLKALNNQIESIRSPEGSRKNPARTCRDIKLCHPDWKSGDYWIDPNQGCTLDAIKVFCNMATGETCVYPSPGSIPRKNWWSSKAKEKKHVWFADTINGGFHFSYGAEDLAPNTANIQMTFLRLLSTEGSQNVTYHCRNSVAYLDEESGSLRKALLIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGKTVIEYRSQKTSRLPIVDIAPMDIGGPEQEFGVDLGPVCFL
SIO_010081: LOC125337951
subclass of: SO_0000673
so part of: LOC125337951
location: join(68445..68601,70329..70529,71356..71372,71646..71678,71793..71824,71945..71998,72206..72308,72735..72812,73066..73111,73195..73249,73339..73395,73510..73564,73657..73709,73798..73851,74029..74073,74174..74227,74335..74379,74498..74551,74630..74729,74858..74903,75449..75546,76034..76087,76678..76785,77015..77068,77175..77273,77811..77864,77949..78047,78138..78191,78340..78393,78686..78739,78875..78928,79020..79064,79248..79346,79433..79540,79629..79682,79873..79926,80031..80084,80200..80253,80343..80450,80569..80622,80714..80767,81243..81404,81485..81592,82501..82608,82788..82841,82981..83088,83429..83482,83589..83697,83886..83939,84215..84322,84872..85161,85420..85607,86343..86585,86917..87063)
location: region:68445-87063:1
so has part: feature:68445-68601:1:exon
so has part: feature:70329-70529:1:exon
so has part: feature:71356-71372:1:exon
so has part: feature:71646-71678:1:exon
so has part: feature:71793-71824:1:exon
so has part: feature:71945-71998:1:exon
so has part: feature:72206-72308:1:exon
so has part: feature:72735-72812:1:exon
so has part: feature:73066-73111:1:exon
so has part: feature:73195-73249:1:exon
so has part: feature:73339-73395:1:exon
so has part: feature:73510-73564:1:exon
so has part: feature:73657-73709:1:exon
so has part: feature:73798-73851:1:exon
so has part: feature:74029-74073:1:exon
so has part: feature:74174-74227:1:exon
so has part: feature:74335-74379:1:exon
so has part: feature:74498-74551:1:exon
so has part: feature:74630-74729:1:exon
so has part: feature:74858-74903:1:exon
so has part: feature:75449-75546:1:exon
so has part: feature:76034-76087:1:exon
so has part: feature:76678-76785:1:exon
so has part: feature:77015-77068:1:exon
so has part: feature:77175-77273:1:exon
so has part: feature:77811-77864:1:exon
so has part: feature:77949-78047:1:exon
so has part: feature:78138-78191:1:exon
so has part: feature:78340-78393:1:exon
so has part: feature:78686-78739:1:exon
so has part: feature:78875-78928:1:exon
so has part: feature:79020-79064:1:exon
so has part: feature:79248-79346:1:exon
so has part: feature:79433-79540:1:exon
so has part: feature:79629-79682:1:exon
so has part: feature:79873-79926:1:exon
so has part: feature:80031-80084:1:exon
so has part: feature:80200-80253:1:exon
so has part: feature:80343-80450:1:exon
so has part: feature:80569-80622:1:exon
so has part: feature:80714-80767:1:exon
so has part: feature:81243-81404:1:exon
so has part: feature:81485-81592:1:exon
so has part: feature:82501-82608:1:exon
so has part: feature:82788-82841:1:exon
so has part: feature:82981-83088:1:exon
so has part: feature:83429-83482:1:exon
so has part: feature:83589-83697:1:exon
so has part: feature:83886-83939:1:exon
so has part: feature:84215-84322:1:exon
so has part: feature:84872-85161:1:exon
so has part: feature:85420-85607:1:exon
so has part: feature:86343-86585:1:exon
so has part: feature:86917-87063:1:exon

XP_048184191.1
type: Protein
SIO_000068: ncbiprotein

position:68445:1
position: 68445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87063:1
position: 87063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68445-68601:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:70329-70529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71356-71372:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71646-71678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:71793-71824:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71945-71998:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72206-72308:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72735-72812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:73066-73111:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:73195-73249:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:73339-73395:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:73510-73564:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:73657-73709:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73798-73851:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:74029-74073:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74174-74227:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:74335-74379:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:74498-74551:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:74630-74729:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74858-74903:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:75449-75546:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:76034-76087:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:76678-76785:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:77015-77068:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:77175-77273:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:77811-77864:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:77949-78047:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:78138-78191:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:78340-78393:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:78686-78739:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:78875-78928:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:79020-79064:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:79248-79346:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:79433-79540:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:79629-79682:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:79873-79926:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:80031-80084:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:80200-80253:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:80343-80450:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:80569-80622:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:80714-80767:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:81243-81404:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:81485-81592:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:82501-82608:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:82788-82841:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:82981-83088:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:83429-83482:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:83589-83697:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:83886-83939:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:84215-84322:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:84872-85161:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:85420-85607:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:86343-86585:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:86917-87063:1:exon

TMEM106C
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(89327..92870)
location: region:89327-92870:-1
so has part: feature:89327-92870:-1:exon
subclass of: SO_0000010

125338101
type: Gene
SIO_000068: ncbigene

position:89327:-1
position: 89327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92870:-1
position: 92870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89327-92870:-1:exon

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328451.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: complement(join(89327..90328,90667..90720,90970..91019,91166..91306,91387..91546,91913..91976,92074..92296,92772..92870))
location: region:89327-92870:-1
so has part: feature:92772-92870:-1:exon
so has part: feature:92074-92296:-1:exon
so has part: feature:91913-91976:-1:exon
so has part: feature:91387-91546:-1:exon
so has part: feature:91166-91306:-1:exon
so has part: feature:90970-91019:-1:exon
so has part: feature:90667-90720:-1:exon
so has part: feature:89327-90328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92772-92870:-1:exon

position:92772:-1
position: 92772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92074-92296:-1:exon

position:92074:-1
position: 92074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92296:-1
position: 92296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91913-91976:-1:exon

position:91913:-1
position: 91913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91976:-1
position: 91976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91387-91546:-1:exon

position:91387:-1
position: 91387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91546:-1
position: 91546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:91166-91306:-1:exon

position:91166:-1
position: 91166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91306:-1
position: 91306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:90970-91019:-1:exon

position:90970:-1
position: 90970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91019:-1
position: 91019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:90667-90720:-1:exon

position:90667:-1
position: 90667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90720:-1
position: 90720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89327-90328:-1:exon

position:90328:-1
position: 90328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM106C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TMEM106C
product: transmembrane protein 106C, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328452.1
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: complement(join(89327..90328,90667..90720,90970..91019,91166..91306,91387..91546,91913..91976,92074..92296,92738..92870))
location: region:89327-92870:-1
so has part: feature:92738-92870:-1:exon
so has part: feature:92074-92296:-1:exon
so has part: feature:91913-91976:-1:exon
so has part: feature:91387-91546:-1:exon
so has part: feature:91166-91306:-1:exon
so has part: feature:90970-91019:-1:exon
so has part: feature:90667-90720:-1:exon
so has part: feature:89327-90328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92738-92870:-1:exon

position:92738:-1
position: 92738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92074-92296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91913-91976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91387-91546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91166-91306:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90970-91019:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90667-90720:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89327-90328:-1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C
translation: MGSVLSLSAASAASSQRKAEDEEDEDLSDSQEPVEDVAKIPYMEFTGQDSVTCPTCQGTGRIPTEQVNELVALIPYSDQRLRPQRTKLYVLLSVLLCLLLSGLGVFFLFPHSVLVDDDGIKVVQVWFDRKNSAVLLAITATLRIRNSNFYSVAVSSLSSQVQYMNTVVGSQQLTNVSSIQPLRDKLVNFTVKAELGGSLSYVYFFCTLPKVKVHNIVILMRTSVKLSYIGHSAQSSLETFHYLDCSSNSTAPLLPLARGAP
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: complement(join(90205..90328,90667..90720,90970..91019,91166..91306,91387..91546,91913..91976,92074..92266))
location: region:90205-92266:-1
so has part: feature:92074-92266:-1:exon
so has part: feature:91913-91976:-1:exon
so has part: feature:91387-91546:-1:exon
so has part: feature:91166-91306:-1:exon
so has part: feature:90970-91019:-1:exon
so has part: feature:90667-90720:-1:exon
so has part: feature:90205-90328:-1:exon

XP_048184408.1
type: Protein
SIO_000068: ncbiprotein

position:90205:-1
position: 90205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92266:-1
position: 92266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92074-92266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91913-91976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91387-91546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91166-91306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90970-91019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90667-90720:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90205-90328:-1:exon

TMEM106C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TMEM106C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 106C
translation: MGSVLSLSAASAASSQRKAEDEEDEDLSDSQEPVEDVAKIPYMEFTGQDSVTCPTCQGTGRIPTEQVNELVALIPYSDQRLRPQRTKLYVLLSVLLCLLLSGLGVFFLFPHSVLVDDDGIKVVQVWFDRKNSAVLLAITATLRIRNSNFYSVAVSSLSSQVQYMNTVVGSQQLTNVSSIQPLRDKLVNFTVKAELGGSLSYVYFFCTLPKVKVHNIVILMRTSVKLSYIGHSAQSSLETFHYLDCSSNSTAPLLPLARGAP
SIO_010081: TMEM106C
subclass of: SO_0000673
so part of: TMEM106C
location: complement(join(90205..90328,90667..90720,90970..91019,91166..91306,91387..91546,91913..91976,92074..92266))
location: region:90205-92266:-1
so has part: feature:92074-92266:-1:exon
so has part: feature:91913-91976:-1:exon
so has part: feature:91387-91546:-1:exon
so has part: feature:91166-91306:-1:exon
so has part: feature:90970-91019:-1:exon
so has part: feature:90667-90720:-1:exon
so has part: feature:90205-90328:-1:exon

XP_048184409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92074-92266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91913-91976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91387-91546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91166-91306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90970-91019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90667-90720:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90205-90328:-1:exon

VDR
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 96240..110219
location: region:96240-110219:1
so has part: feature:96240-110219:1:exon
subclass of: SO_0000010

125338097
type: Gene
SIO_000068: ncbigene

position:96240:1
position: 96240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110219:1
position: 110219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96240-110219:1:exon

VDR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: VDR
product: vitamin D receptor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328446.1
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(96240..96319,97189..97243,102652..102802,104584..104714,106962..107146,107251..107374,107774..107945,108384..108535,108812..108928,109146..110219)
location: region:96240-110219:1
so has part: feature:96240-96319:1:exon
so has part: feature:97189-97243:1:exon
so has part: feature:102652-102802:1:exon
so has part: feature:104584-104714:1:exon
so has part: feature:106962-107146:1:exon
so has part: feature:107251-107374:1:exon
so has part: feature:107774-107945:1:exon
so has part: feature:108384-108535:1:exon
so has part: feature:108812-108928:1:exon
so has part: feature:109146-110219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96240-96319:1:exon

position:96319:1
position: 96319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97189-97243:1:exon

position:97189:1
position: 97189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97243:1
position: 97243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:102652-102802:1:exon

position:102652:1
position: 102652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102802:1
position: 102802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104584-104714:1:exon

position:104584:1
position: 104584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104714:1
position: 104714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:106962-107146:1:exon

position:106962:1
position: 106962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107146:1
position: 107146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107251-107374:1:exon

position:107251:1
position: 107251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107374:1
position: 107374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:107774-107945:1:exon

position:107774:1
position: 107774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107945:1
position: 107945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:108384-108535:1:exon

position:108384:1
position: 108384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108535:1
position: 108535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:108812-108928:1:exon

position:108812:1
position: 108812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108928:1
position: 108928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:109146-110219:1:exon

position:109146:1
position: 109146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VDR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: VDR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin D3 receptor
translation: MDPGTSSTSLPDPAGDSERNIPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKAMFTCPFSGDCHITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALRESLKPKLSEEQQKVIDVLLEAHRKTYDPTYADFTKFRPPVRSQPSSRGAAKSSSLLTQDLSSEDSSDLFSSEAFSTFPDSVEPPPFSSLVLSEEQDESSSMNLEFSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLSAEDQIILLKCSAIEVIMLRSNQSFTLEDMSWTCGSSDFKYRVSDVTQAGHSMELLEPLVKFQVGLKKLNLHEEEHVLLMAICILSPDRPGVREPARVEALQERLSEVLQSYIRARHAAPGSRLLYAKMIQKLADLRSLNEEHSRQYRCLSFQPEHSMQLTPLVLEVFGNEIS
SIO_010081: VDR
subclass of: SO_0000673
so part of: VDR
location: join(102654..102802,104584..104714,106962..107146,107251..107374,107774..107945,108384..108535,108812..108928,109146..109405)
location: region:102654-109405:1
so has part: feature:102654-102802:1:exon
so has part: feature:104584-104714:1:exon
so has part: feature:106962-107146:1:exon
so has part: feature:107251-107374:1:exon
so has part: feature:107774-107945:1:exon
so has part: feature:108384-108535:1:exon
so has part: feature:108812-108928:1:exon
so has part: feature:109146-109405:1:exon

XP_048184403.1
type: Protein
SIO_000068: ncbiprotein

position:102654:1
position: 102654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109405:1
position: 109405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102654-102802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104584-104714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106962-107146:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107251-107374:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107774-107945:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108384-108535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108812-108928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109146-109405:1:exon

MYG1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: MYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 111247..119510
location: region:111247-119510:1
so has part: feature:111247-119510:1:exon
subclass of: SO_0000010

125337881
type: Gene
SIO_000068: ncbigene

position:111247:1
position: 111247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119510:1
position: 119510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111247-119510:1:exon

MYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: MYG1
product: MYG1 exonuclease, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328102.1
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: join(111247..111461,111799..111911,112002..112161,112315..112464,112540..112671,112893..113074,116996..119510)
location: region:111247-119510:1
so has part: feature:111247-111461:1:exon
so has part: feature:111799-111911:1:exon
so has part: feature:112002-112161:1:exon
so has part: feature:112315-112464:1:exon
so has part: feature:112540-112671:1:exon
so has part: feature:112893-113074:1:exon
so has part: feature:116996-119510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111247-111461:1:exon

position:111461:1
position: 111461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111799-111911:1:exon

position:111799:1
position: 111799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111911:1
position: 111911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:112002-112161:1:exon

position:112002:1
position: 112002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112161:1
position: 112161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:112315-112464:1:exon

position:112315:1
position: 112315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112464:1
position: 112464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:112540-112671:1:exon

position:112540:1
position: 112540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112671:1
position: 112671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:112893-113074:1:exon

position:112893:1
position: 112893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113074:1
position: 113074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:116996-119510:1:exon

position:116996:1
position: 116996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYG1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 134902
gene: MYG1
product: MYG1 exonuclease, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007208149.1
SIO_010081: MYG1
so part of: MYG1
location: join(111247..111461,111799..111911,112002..112161,112315..112464,112540..112671,112893..113074,116996..117549,117966..119510)
location: region:111247-119510:1
so has part: feature:111247-111461:1:exon
so has part: feature:111799-111911:1:exon
so has part: feature:112002-112161:1:exon
so has part: feature:112315-112464:1:exon
so has part: feature:112540-112671:1:exon
so has part: feature:112893-113074:1:exon
so has part: feature:116996-117549:1:exon
so has part: feature:117966-119510:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111247-111461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111799-111911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112002-112161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112315-112464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112540-112671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112893-113074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116996-117549:1:exon

position:117549:1
position: 117549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:117966-119510:1:exon

position:117966:1
position: 117966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: MYG1
product: MYG1 exonuclease, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328099.1
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: join(111247..111461,111799..111911,112002..112161,112315..112464,112540..112671,112893..113074,113152..113625)
location: region:111247-113625:1
so has part: feature:111247-111461:1:exon
so has part: feature:111799-111911:1:exon
so has part: feature:112002-112161:1:exon
so has part: feature:112315-112464:1:exon
so has part: feature:112540-112671:1:exon
so has part: feature:112893-113074:1:exon
so has part: feature:113152-113625:1:exon

position:113625:1
position: 113625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111247-111461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111799-111911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112002-112161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112315-112464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112540-112671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112893-113074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113152-113625:1:exon

position:113152:1
position: 113152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: MYG1
product: MYG1 exonuclease, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328101.1
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: join(111247..111461,111799..111911,112002..112161,112315..112464,112549..112671,112893..113074,113152..113625)
location: region:111247-113625:1
so has part: feature:111247-111461:1:exon
so has part: feature:111799-111911:1:exon
so has part: feature:112002-112161:1:exon
so has part: feature:112315-112464:1:exon
so has part: feature:112549-112671:1:exon
so has part: feature:112893-113074:1:exon
so has part: feature:113152-113625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111247-111461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111799-111911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112002-112161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112315-112464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112549-112671:1:exon

position:112549:1
position: 112549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:112893-113074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113152-113625:1:exon

MYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: MYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MYG1 exonuclease isoform X3
translation: MRSAARAARLVGMAATGTGTGTGTGTGHKRPHPEPAARIGTHDGTFHCDEALACFLLRLLPRYRDAEIVRTRDPQLLARCDVVVDVGGEYDPGRHRYDHHQRSFTESMRSLRPDKPWSTKLSSAGLVYCHFGSQILAGLLGQPEDGPVVTALYDKLYENFVEEIDAIDNGIAPAAGEPRYALSTTLSVRVGHLNPRWNDPDQDTECPQAGFRRAMELVGSEFLERLDFYHRAWLPARALVEEAICRRFEVDASGQILELSQGGCPWKEHLFQLERELALPRPLQLVLFLDRGGQWRVQSVPTAPHSFQSRAAVLVSQEWLGWRTRDSKHRDPQAGPGPRGVSLKSLQDPTTVTESEEQHEE
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: join(111270..111461,111799..111911,112002..112161,112315..112464,112540..112671,112893..113074,116996..117152)
location: region:111270-117152:1
so has part: feature:111270-111461:1:exon
so has part: feature:111799-111911:1:exon
so has part: feature:112002-112161:1:exon
so has part: feature:112315-112464:1:exon
so has part: feature:112540-112671:1:exon
so has part: feature:112893-113074:1:exon
so has part: feature:116996-117152:1:exon

XP_048184059.1
type: Protein
SIO_000068: ncbiprotein

position:111270:1
position: 111270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117152:1
position: 117152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111270-111461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111799-111911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112002-112161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112315-112464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112540-112671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112893-113074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116996-117152:1:exon

MYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: MYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MYG1 exonuclease isoform X1
translation: MRSAARAARLVGMAATGTGTGTGTGTGHKRPHPEPAARIGTHDGTFHCDEALACFLLRLLPRYRDAEIVRTRDPQLLARCDVVVDVGGEYDPGRHRYDHHQRSFTESMRSLRPDKPWSTKLSSAGLVYCHFGSQILAGLLGQPEDGPVVTALYDKLYENFVEEIDAIDNGIAPAAGEPRYALSTTLSVRVGHLNPRWNDPDQDTECPQAGFRRAMELVGSEFLERLDFYHRAWLPARALVEEAICRRFEVDASGQILELSQGGCPWKEHLFQLERELALPRPLQLVLFLDRGGQWRVQSVPTAPHSFQSRLPLPEAWRGLRDEVLSELAGIPGCVFVHASGFIGGNCTREGALEMARRALELGGGTEST
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: join(111270..111461,111799..111911,112002..112161,112315..112464,112540..112671,112893..113074,113152..113332)
location: region:111270-113332:1
so has part: feature:111270-111461:1:exon
so has part: feature:111799-111911:1:exon
so has part: feature:112002-112161:1:exon
so has part: feature:112315-112464:1:exon
so has part: feature:112540-112671:1:exon
so has part: feature:112893-113074:1:exon
so has part: feature:113152-113332:1:exon

XP_048184056.1
type: Protein
SIO_000068: ncbiprotein

position:113332:1
position: 113332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111270-111461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111799-111911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112002-112161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112315-112464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112540-112671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112893-113074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113152-113332:1:exon

MYG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: MYG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MYG1 exonuclease isoform X2
translation: MRSAARAARLVGMAATGTGTGTGTGTGHKRPHPEPAARIGTHDGTFHCDEALACFLLRLLPRYRDAEIVRTRDPQLLARCDVVVDVGGEYDPGRHRYDHHQRSFTESMRSLRPDKPWSTKLSSAGLVYCHFGSQILAGLLGQPEDGPVVTALYDKLYENFVEEIDAIDNGIAPAAGEPRYALSTTLSVRVGHLNPRWNDPDQDTEAGFRRAMELVGSEFLERLDFYHRAWLPARALVEEAICRRFEVDASGQILELSQGGCPWKEHLFQLERELALPRPLQLVLFLDRGGQWRVQSVPTAPHSFQSRLPLPEAWRGLRDEVLSELAGIPGCVFVHASGFIGGNCTREGALEMARRALELGGGTEST
SIO_010081: MYG1
subclass of: SO_0000673
so part of: MYG1
location: join(111270..111461,111799..111911,112002..112161,112315..112464,112549..112671,112893..113074,113152..113332)
location: region:111270-113332:1
so has part: feature:111270-111461:1:exon
so has part: feature:111799-111911:1:exon
so has part: feature:112002-112161:1:exon
so has part: feature:112315-112464:1:exon
so has part: feature:112549-112671:1:exon
so has part: feature:112893-113074:1:exon
so has part: feature:113152-113332:1:exon

XP_048184058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111270-111461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111799-111911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112002-112161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112315-112464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112549-112671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112893-113074:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113152-113332:1:exon

AAAS
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: AAAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(114977..121430)
location: region:114977-121430:-1
so has part: feature:114977-121430:-1:exon
subclass of: SO_0000010

125337880
type: Gene
SIO_000068: ncbigene

position:114977:-1
position: 114977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121430:-1
position: 121430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114977-121430:-1:exon

AAAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: AAAS
product: aladin WD repeat nucleoporin
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
transcript id: XM_048328098.1
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: complement(join(114977..115228,115973..116057,116449..116530,116635..116702,116828..116921,117309..117399,117783..117843,118033..118157,118311..118431,118549..118692,119306..119405,119807..119853,120143..120234,120357..120412,120487..120615,120926..121061,121363..121430))
location: region:114977-121430:-1
so has part: feature:121363-121430:-1:exon
so has part: feature:120926-121061:-1:exon
so has part: feature:120487-120615:-1:exon
so has part: feature:120357-120412:-1:exon
so has part: feature:120143-120234:-1:exon
so has part: feature:119807-119853:-1:exon
so has part: feature:119306-119405:-1:exon
so has part: feature:118549-118692:-1:exon
so has part: feature:118311-118431:-1:exon
so has part: feature:118033-118157:-1:exon
so has part: feature:117783-117843:-1:exon
so has part: feature:117309-117399:-1:exon
so has part: feature:116828-116921:-1:exon
so has part: feature:116635-116702:-1:exon
so has part: feature:116449-116530:-1:exon
so has part: feature:115973-116057:-1:exon
so has part: feature:114977-115228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121363-121430:-1:exon

position:121363:-1
position: 121363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120926-121061:-1:exon

position:120926:-1
position: 120926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121061:-1
position: 121061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120487-120615:-1:exon

position:120487:-1
position: 120487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120615:-1
position: 120615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:120357-120412:-1:exon

position:120357:-1
position: 120357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120412:-1
position: 120412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:120143-120234:-1:exon

position:120143:-1
position: 120143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120234:-1
position: 120234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:119807-119853:-1:exon

position:119807:-1
position: 119807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119853:-1
position: 119853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:119306-119405:-1:exon

position:119306:-1
position: 119306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119405:-1
position: 119405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:118549-118692:-1:exon

position:118549:-1
position: 118549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118692:-1
position: 118692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:118311-118431:-1:exon

position:118311:-1
position: 118311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118431:-1
position: 118431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:118033-118157:-1:exon

position:118033:-1
position: 118033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118157:-1
position: 118157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:117783-117843:-1:exon

position:117783:-1
position: 117783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117843:-1
position: 117843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:117309-117399:-1:exon

position:117309:-1
position: 117309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117399:-1
position: 117399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:116828-116921:-1:exon

position:116828:-1
position: 116828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116921:-1
position: 116921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:116635-116702:-1:exon

position:116635:-1
position: 116635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116702:-1
position: 116702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:116449-116530:-1:exon

position:116449:-1
position: 116449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116530:-1
position: 116530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:115973-116057:-1:exon

position:115973:-1
position: 115973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116057:-1
position: 116057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:114977-115228:-1:exon

position:115228:-1
position: 115228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AAAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: AAAS
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: aladin
translation: MCSLGLFPPPPPPGDVTLYEFNNALVCGRLSEQLPLAFQSQVPDLPVLSLPKEPLKAHGRLEPSARPPFIHHRESLWKRCLSAWRDAGLCGLLRELASAEEEGLQWLRTGSSHALAVCRWLSSLHGSLFPHLSLTSEDMIAAFSQAVDWAGCTVRAFAWHPHTNKFAVALLDDSIRVYNSNSATVPSLKHRLQRNVAAMAWKPLCASILAVACQSCVLVWHLDPTSLSTRPSSGCAQVLSYPGHSPVTSLAWAPSGERLLSASPVDTAMLVWDVSTESCVQLQWFGGGGVTYLAWSPDGSKVLAATPSAVFRVWEAQKWTCERWPTIRGRCQTGCWSPDGSRLLFTVLGESVIYSLSFSEYRGEMQGQVGGSKTASIVADLSETTFETLYGEERIGGEVHSMVWDPTGERLAVIIRGHPEGPGSQTAIAVFRTRNSPVFELLPCGFVRGERGARPQLISFHPCFPRGALLTVCWSSGRISHIPFFFVSALEPRASPRRSPVPVVGSVREQPLFSEL
SIO_010081: AAAS
subclass of: SO_0000673
so part of: AAAS
location: complement(join(115094..115228,115973..116057,116449..116530,116635..116702,116828..116921,117309..117399,117783..117843,118033..118157,118311..118431,118549..118692,119306..119405,119807..119853,120143..120234,120357..120412,120487..120615,120926..121048))
location: region:115094-121048:-1
so has part: feature:120926-121048:-1:exon
so has part: feature:120487-120615:-1:exon
so has part: feature:120357-120412:-1:exon
so has part: feature:120143-120234:-1:exon
so has part: feature:119807-119853:-1:exon
so has part: feature:119306-119405:-1:exon
so has part: feature:118549-118692:-1:exon
so has part: feature:118311-118431:-1:exon
so has part: feature:118033-118157:-1:exon
so has part: feature:117783-117843:-1:exon
so has part: feature:117309-117399:-1:exon
so has part: feature:116828-116921:-1:exon
so has part: feature:116635-116702:-1:exon
so has part: feature:116449-116530:-1:exon
so has part: feature:115973-116057:-1:exon
so has part: feature:115094-115228:-1:exon

XP_048184055.1
type: Protein
SIO_000068: ncbiprotein

position:115094:-1
position: 115094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121048:-1
position: 121048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120926-121048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120487-120615:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120357-120412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120143-120234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119807-119853:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119306-119405:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118549-118692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118311-118431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118033-118157:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:117783-117843:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:117309-117399:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:116828-116921:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116635-116702:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:116449-116530:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:115973-116057:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:115094-115228:-1:exon

SP7
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(123652..126892)
location: region:123652-126892:-1
so has part: feature:123652-126892:-1:exon
subclass of: SO_0000010

125337902
type: Gene
SIO_000068: ncbigene

position:123652:-1
position: 123652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126892:-1
position: 126892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123652-126892:-1:exon

SP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SP7
product: Sp7 transcription factor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328140.1
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: complement(join(123652..125089,126796..126892))
location: region:123652-126892:-1
so has part: feature:126796-126892:-1:exon
so has part: feature:123652-125089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126796-126892:-1:exon

position:126796:-1
position: 126796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123652-125089:-1:exon

position:125089:-1
position: 125089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp7
translation: MGDSYAAAFPSAPGLLSPSASPQASPGPYGPDYGPFGHPFPAPSGAQEVLGAPVVVAAKGHPPSECLPGVYPSLEMPHPYGSWYKGGIGGGLPGGSGPAAPSWWDVHPNGGWLGGPAGAEGLQGSLQGQPTLSPPLPTYGSDFGALNPPPYTNTPAAPPTPKPTPGETPKGPRGGSLGGRPACDCPNCQELERLGGPGGSRRKPVHSCHIPGCGKVYGKASHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELERHVRTHTREKKFTCLLCSKRFTRSDHLSKHQKTHADPGPPKPTPGSEQPPASPRPPPASPGKDGGSPEAGSLLEI
SIO_010081: SP7
subclass of: SO_0000673
so part of: SP7
location: complement(124024..125013)
location: region:124024-125013:-1
so has part: feature:124024-125013:-1:exon

XP_048184097.1
type: Protein
SIO_000068: ncbiprotein

position:124024:-1
position: 124024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125013:-1
position: 125013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124024-125013:-1:exon

SP1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133724..145629
location: region:133724-145629:1
so has part: feature:133724-145629:1:exon
subclass of: SO_0000010

125337883
type: Gene
SIO_000068: ncbigene

position:133724:1
position: 133724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145629:1
position: 145629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133724-145629:1:exon

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SP1
product: Sp1 transcription factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328104.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(133724..133758,134828..134922,135522..137019,144032..144200,144617..144816,145193..145629)
location: region:133724-145629:1
so has part: feature:133724-133758:1:exon
so has part: feature:134828-134922:1:exon
so has part: feature:135522-137019:1:exon
so has part: feature:144032-144200:1:exon
so has part: feature:144617-144816:1:exon
so has part: feature:145193-145629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133724-133758:1:exon

position:133758:1
position: 133758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134828-134922:1:exon

position:134828:1
position: 134828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134922:1
position: 134922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135522-137019:1:exon

position:135522:1
position: 135522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137019:1
position: 137019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:144032-144200:1:exon

position:144032:1
position: 144032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144200:1
position: 144200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:144617-144816:1:exon

position:144617:1
position: 144617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144816:1
position: 144816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:145193-145629:1:exon

position:145193:1
position: 145193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X1
translation: MSDQESPEEMSAVKPDKGEGDASSTSSAGGGEAQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLNAAAAQLTQSANGWQIISAGSSTPTGSKEPGSNGSNGGDASKSRPVSAGPYVVTSASGLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTPAQVNVQQDASGQLQIIPGSNQQIITSRAGGSNLIAMPNLLQQAVPIQGVGLANNSLSGQTQYVANVPVALNGNITLLPVNSVAASLAPTSQTGTLSSSGSPDSSSQPATSGAASSSGSTATSQASSGAFFTNANSYSTTTTTTSNVGVMNFSTSATVGTNVQAQTPQRASSVPSSDSLQTPVSGVALQPGQQKEGDQSQQSQQQQQILIQPQLVQGGQTIQALQTTPLSGQTFATQAISQDTLQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSVPGLQTINLSALGASGIQVHQLQGLPLAIANAPGDHGAQLGLHSGSGDGLGDESAAVEEGETSPDPQPQQGRKTRREACTCPYCKEGEGRSSGDPGKKKQHICHVPGCGKVYGKTSHLRAHLRWHTGERPFICTWVLCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGATNVAMNVSAVPMDTAAAAEGNGGATPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(133752..133758,134828..134922,135522..137019,144032..144200,144617..144816,145193..145509)
location: region:133752-145509:1
so has part: feature:133752-133758:1:exon
so has part: feature:134828-134922:1:exon
so has part: feature:135522-137019:1:exon
so has part: feature:144032-144200:1:exon
so has part: feature:144617-144816:1:exon
so has part: feature:145193-145509:1:exon

XP_048184061.1
type: Protein
SIO_000068: ncbiprotein

position:133752:1
position: 133752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145509:1
position: 145509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133752-133758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134828-134922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135522-137019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144032-144200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144617-144816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:145193-145509:1:exon

SP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SP1
product: Sp1 transcription factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328105.1
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(134203..134391,134828..134922,135522..137019,144032..144200,144617..144816,145193..145629)
location: region:134203-145629:1
so has part: feature:134203-134391:1:exon
so has part: feature:134828-134922:1:exon
so has part: feature:135522-137019:1:exon
so has part: feature:144032-144200:1:exon
so has part: feature:144617-144816:1:exon
so has part: feature:145193-145629:1:exon

position:134203:1
position: 134203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134203-134391:1:exon

position:134391:1
position: 134391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134828-134922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135522-137019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144032-144200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144617-144816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:145193-145629:1:exon

SP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp1 isoform X2
translation: MSAVKPDKGEGDASSTSSAGGGEAQESQPSPLALLAATCSRIESPNENSNSSQGQQGGSGELDLNAAAAQLTQSANGWQIISAGSSTPTGSKEPGSNGSNGGDASKSRPVSAGPYVVTSASGLQNQQVLTGLPGVIPNIQYQVIPQFQTIDGQQLQFATTPAQVNVQQDASGQLQIIPGSNQQIITSRAGGSNLIAMPNLLQQAVPIQGVGLANNSLSGQTQYVANVPVALNGNITLLPVNSVAASLAPTSQTGTLSSSGSPDSSSQPATSGAASSSGSTATSQASSGAFFTNANSYSTTTTTTSNVGVMNFSTSATVGTNVQAQTPQRASSVPSSDSLQTPVSGVALQPGQQKEGDQSQQSQQQQQILIQPQLVQGGQTIQALQTTPLSGQTFATQAISQDTLQNLQLQAVPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQGVSLGQTGSTSTTLTPIASLPSGTVTVNAAQLSSVPGLQTINLSALGASGIQVHQLQGLPLAIANAPGDHGAQLGLHSGSGDGLGDESAAVEEGETSPDPQPQQGRKTRREACTCPYCKEGEGRSSGDPGKKKQHICHVPGCGKVYGKTSHLRAHLRWHTGERPFICTWVLCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGATNVAMNVSAVPMDTAAAAEGNGGATPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
SIO_010081: SP1
subclass of: SO_0000673
so part of: SP1
location: join(134848..134922,135522..137019,144032..144200,144617..144816,145193..145509)
location: region:134848-145509:1
so has part: feature:134848-134922:1:exon
so has part: feature:135522-137019:1:exon
so has part: feature:144032-144200:1:exon
so has part: feature:144617-144816:1:exon
so has part: feature:145193-145509:1:exon

XP_048184062.1
type: Protein
SIO_000068: ncbiprotein

position:134848:1
position: 134848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134848-134922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135522-137019:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144032-144200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144617-144816:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145193-145509:1:exon

AMHR2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: AMHR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 148585..153845
location: region:148585-153845:1
so has part: feature:148585-153845:1:exon
subclass of: SO_0000010

125337763
type: Gene
SIO_000068: ncbigene

position:148585:1
position: 148585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153845:1
position: 153845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148585-153845:1:exon

AMHR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: AMHR2
product: anti-Mullerian hormone receptor type 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048327865.1
SIO_010081: AMHR2
subclass of: SO_0000673
so part of: AMHR2
location: join(148585..148893,148984..149150,149566..149754,150051..150130,150521..150629,150895..151124,151504..151619,151752..151912,152247..152393,152462..152597,153072..153231,153722..153845)
location: region:148585-153845:1
so has part: feature:148585-148893:1:exon
so has part: feature:148984-149150:1:exon
so has part: feature:149566-149754:1:exon
so has part: feature:150051-150130:1:exon
so has part: feature:150521-150629:1:exon
so has part: feature:150895-151124:1:exon
so has part: feature:151504-151619:1:exon
so has part: feature:151752-151912:1:exon
so has part: feature:152247-152393:1:exon
so has part: feature:152462-152597:1:exon
so has part: feature:153072-153231:1:exon
so has part: feature:153722-153845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148585-148893:1:exon

position:148893:1
position: 148893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148984-149150:1:exon

position:148984:1
position: 148984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149150:1
position: 149150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:149566-149754:1:exon

position:149566:1
position: 149566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149754:1
position: 149754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150051-150130:1:exon

position:150051:1
position: 150051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150130:1
position: 150130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:150521-150629:1:exon

position:150521:1
position: 150521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150629:1
position: 150629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:150895-151124:1:exon

position:150895:1
position: 150895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151124:1
position: 151124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:151504-151619:1:exon

position:151504:1
position: 151504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151619:1
position: 151619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:151752-151912:1:exon

position:151752:1
position: 151752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151912:1
position: 151912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:152247-152393:1:exon

position:152247:1
position: 152247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152393:1
position: 152393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:152462-152597:1:exon

position:152462:1
position: 152462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152597:1
position: 152597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:153072-153231:1:exon

position:153072:1
position: 153072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153231:1
position: 153231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:153722-153845:1:exon

position:153722:1
position: 153722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMHR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: AMHR2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 4 bases in 4 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:149141..149143,aa:OTHER)
product: LOW QUALITY PROTEIN: anti-Muellerian hormone type-2 receptor
translation: MGRPGPHNLTCVSNKHPSVRGELGDAGGAAAGAVRCPPGQCCIGIWNRSHALVAGXDPGCWGGEGDACPSATCSPSPAGIPGGSVLLCLCHGHLCNGNATGTATATGTGTAVGLGGARQGPVPGRAGTLWLWXAGPLLLILLTCLGILGLRRTRAHTGQPLRGGRRIGXPPEPPSPDLPVLRFLQVLQSGRFSAVWRGTLRQRPVAIKAFAAGAGRRFAAERAVHALPLMEHENVARLLDTRAAGPRARGGLLVLQLYPPWGSLRHFLGQHVGTWAGSVRLALSLARGLAFLHQELWRDGLYKPSVVHRDLSSQNVLVREDGTCAIGDFGLALALPPRAQDSTGARHAVTIRKAGTQRYLAPEILDESLDXRAWGRALRQADVYALALLLWEILSRCQALSPGAPVPPFRLAYEAELGSSPTGAQLRRLAADERRRPLXPPAWHCVPQPGGALPELLEDCWDPDPEARLSAERALQRLQRLAAGPAPTPGDPGPGPPPARCVLEPPTMWNPGAGTGGHPRLGGLP
SIO_010081: AMHR2
subclass of: SO_0000673
so part of: AMHR2
location: join(148886..148893,148984..149150,149566..149754,150051..150130,150521..150629,150895..151124,151504..151619,151752..151912,152247..152393,152462..152597,153072..153231,153722..153796)
location: region:148886-153796:1
so has part: feature:148886-148893:1:exon
so has part: feature:148984-149150:1:exon
so has part: feature:149566-149754:1:exon
so has part: feature:150051-150130:1:exon
so has part: feature:150521-150629:1:exon
so has part: feature:150895-151124:1:exon
so has part: feature:151504-151619:1:exon
so has part: feature:151752-151912:1:exon
so has part: feature:152247-152393:1:exon
so has part: feature:152462-152597:1:exon
so has part: feature:153072-153231:1:exon
so has part: feature:153722-153796:1:exon

XP_048183822.1
type: Protein
SIO_000068: ncbiprotein

position:148886:1
position: 148886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153796:1
position: 153796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148886-148893:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148984-149150:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149566-149754:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150051-150130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150521-150629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150895-151124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151504-151619:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151752-151912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152247-152393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152462-152597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153072-153231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153722-153796:1:exon

LOC125337765
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337765
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 154007..154528
location: region:154007-154528:1
so has part: feature:154007-154528:1:exon
subclass of: SO_0000011

125337765
type: Gene
SIO_000068: ncbigene

position:154007:1
position: 154007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154528:1
position: 154528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154007-154528:1:exon

LOC125337765
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125337765
product: uncharacterized LOC125337765
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007208131.1
SIO_010081: LOC125337765
subclass of: SO_0000673
so part of: LOC125337765
location: join(154007..154192,154276..154528)
location: region:154007-154528:1
so has part: feature:154007-154192:1:exon
so has part: feature:154276-154528:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154007-154192:1:exon

position:154192:1
position: 154192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:154276-154528:1:exon

position:154276:1
position: 154276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 155162..169555
location: region:155162-169555:1
so has part: feature:155162-169555:1:exon
subclass of: SO_0000010

125337764
type: Gene
SIO_000068: ncbigene

position:155162:1
position: 155162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169555:1
position: 169555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155162-169555:1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: PCBP2
product: poly(rC) binding protein 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons
transcript id: XM_048327866.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(155162..155243,157398..157515,157839..157862,157971..158003,158293..158410,159635..159767,160352..160480,160887..160961,162381..162467,162642..162707,163552..163593,164570..164642,165089..165127,166029..166081,166611..166780,168991..169555)
location: region:155162-169555:1
so has part: feature:155162-155243:1:exon
so has part: feature:157398-157515:1:exon
so has part: feature:157839-157862:1:exon
so has part: feature:157971-158003:1:exon
so has part: feature:158293-158410:1:exon
so has part: feature:159635-159767:1:exon
so has part: feature:160352-160480:1:exon
so has part: feature:160887-160961:1:exon
so has part: feature:162381-162467:1:exon
so has part: feature:162642-162707:1:exon
so has part: feature:163552-163593:1:exon
so has part: feature:164570-164642:1:exon
so has part: feature:165089-165127:1:exon
so has part: feature:166029-166081:1:exon
so has part: feature:166611-166780:1:exon
so has part: feature:168991-169555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155162-155243:1:exon

position:155243:1
position: 155243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157398-157515:1:exon

position:157398:1
position: 157398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157515:1
position: 157515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157839-157862:1:exon

position:157839:1
position: 157839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157862:1
position: 157862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:157971-158003:1:exon

position:157971:1
position: 157971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158003:1
position: 158003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158293-158410:1:exon

position:158293:1
position: 158293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158410:1
position: 158410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:159635-159767:1:exon

position:159635:1
position: 159635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159767:1
position: 159767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:160352-160480:1:exon

position:160352:1
position: 160352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160480:1
position: 160480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:160887-160961:1:exon

position:160887:1
position: 160887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160961:1
position: 160961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:162381-162467:1:exon

position:162381:1
position: 162381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162467:1
position: 162467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:162642-162707:1:exon

position:162642:1
position: 162642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162707:1
position: 162707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:163552-163593:1:exon

position:163552:1
position: 163552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163593:1
position: 163593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:164570-164642:1:exon

position:164570:1
position: 164570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164642:1
position: 164642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:165089-165127:1:exon

position:165089:1
position: 165089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165127:1
position: 165127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:166029-166081:1:exon

position:166029:1
position: 166029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166081:1
position: 166081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:166611-166780:1:exon

position:166611:1
position: 166611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166780:1
position: 166780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:168991-169555:1:exon

position:168991:1
position: 168991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: PCBP2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: poly(rC)-binding protein 2
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEATRQPLHGNELGPIPAWAAVLPAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: join(157447..157515,157839..157862,157971..158003,158293..158410,159635..159767,160352..160480,160887..160961,162381..162467,162642..162707,163552..163593,164570..164642,165089..165127,166029..166081,166611..166780,168991..169027)
location: region:157447-169027:1
so has part: feature:157447-157515:1:exon
so has part: feature:157839-157862:1:exon
so has part: feature:157971-158003:1:exon
so has part: feature:158293-158410:1:exon
so has part: feature:159635-159767:1:exon
so has part: feature:160352-160480:1:exon
so has part: feature:160887-160961:1:exon
so has part: feature:162381-162467:1:exon
so has part: feature:162642-162707:1:exon
so has part: feature:163552-163593:1:exon
so has part: feature:164570-164642:1:exon
so has part: feature:165089-165127:1:exon
so has part: feature:166029-166081:1:exon
so has part: feature:166611-166780:1:exon
so has part: feature:168991-169027:1:exon

XP_048183823.1
type: Protein
SIO_000068: ncbiprotein

position:157447:1
position: 157447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169027:1
position: 169027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157447-157515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157839-157862:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157971-158003:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158293-158410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159635-159767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160352-160480:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160887-160961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:162381-162467:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:162642-162707:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:163552-163593:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:164570-164642:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:165089-165127:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:166029-166081:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:166611-166780:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:168991-169027:1:exon

MAP3K12
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: MAP3K12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(170115..177249)
location: region:170115-177249:-1
so has part: feature:170115-177249:-1:exon
subclass of: SO_0000010

125338043
type: Gene
SIO_000068: ncbigene

position:170115:-1
position: 170115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177249:-1
position: 177249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170115-177249:-1:exon

MAP3K12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: MAP3K12
product: mitogen-activated protein kinase kinase kinase 12
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 1 base in 1 codon
transcript id: XM_048328356.1
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: complement(join(170115..170287,170498..170750,170855..170925,171125..171563,171952..172089,172329..172445,172643..172752,172934..173042,173351..173509,173765..173922,174490..174681,175081..175264,175520..175856,177180..177249))
location: region:170115-177249:-1
so has part: feature:177180-177249:-1:exon
so has part: feature:175520-175856:-1:exon
so has part: feature:175081-175264:-1:exon
so has part: feature:174490-174681:-1:exon
so has part: feature:173765-173922:-1:exon
so has part: feature:173351-173509:-1:exon
so has part: feature:172934-173042:-1:exon
so has part: feature:172643-172752:-1:exon
so has part: feature:172329-172445:-1:exon
so has part: feature:171952-172089:-1:exon
so has part: feature:171125-171563:-1:exon
so has part: feature:170855-170925:-1:exon
so has part: feature:170498-170750:-1:exon
so has part: feature:170115-170287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177180-177249:-1:exon

position:177180:-1
position: 177180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175520-175856:-1:exon

position:175520:-1
position: 175520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175856:-1
position: 175856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175081-175264:-1:exon

position:175081:-1
position: 175081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175264:-1
position: 175264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:174490-174681:-1:exon

position:174490:-1
position: 174490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174681:-1
position: 174681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173765-173922:-1:exon

position:173765:-1
position: 173765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173922:-1
position: 173922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173351-173509:-1:exon

position:173351:-1
position: 173351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173509:-1
position: 173509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:172934-173042:-1:exon

position:172934:-1
position: 172934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173042:-1
position: 173042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:172643-172752:-1:exon

position:172643:-1
position: 172643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172752:-1
position: 172752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:172329-172445:-1:exon

position:172329:-1
position: 172329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172445:-1
position: 172445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:171952-172089:-1:exon

position:171952:-1
position: 171952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172089:-1
position: 172089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:171125-171563:-1:exon

position:171125:-1
position: 171125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171563:-1
position: 171563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:170855-170925:-1:exon

position:170855:-1
position: 170855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170925:-1
position: 170925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:170498-170750:-1:exon

position:170498:-1
position: 170498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170750:-1
position: 170750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:170115-170287:-1:exon

position:170287:-1
position: 170287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAP3K12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: MAP3K12
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 12
translation: MACLHETRTPSPSLALPSDGTPEQELTPTQCVLRDVLPAPSAPPEAWPRRGGARPPELGPEAAGPLAADAAHLRCQAGGGFLEGLFXCLKPVWTMIGKAYAAEHKHPPEDPWEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKETDIKHLRKLKHPNIITFKGVCTQAPCYCIIMEFCAQGQLYEVLRAGRKVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTXKELIDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPDKDVDSSAIIWGVGSNSLHLPXPSSCPDGFKVLLRQCWNSKPRNRPSFRQILLHLDIASADVLSTPQETYFKSQAEWREEVKLHFEKIKSEGTCLHRLEEELINRRREELRHALDIREHYERKLERANNLYMELSALMLQLELKEKELLRREQALEKRYPGLFKPRVPRGLLHGNAVETLIKKRNVPQKLSPHGKRPDILKPEVLLPKLDAAMAQVALPGCPKGPPSPGRSRRAKGRHRKAGPRGGCGEPGPEAGTPRGPPATAASPDILGGTLEAAGAPPATVPDAGPEGATGTQGSPPPQPPTPGEPERESGAGRGGKGGAGQHLTPAALLYRAAVTRGQKRGVSSEEEEGEVDSEVELPLRQRWPPGMSKRQSLSTFSSENFSDGDGDEGHTSEPSHSATPDVGSTNTDERPDDRSEDLLSQGSEIPLDAAPPEGPGRRHGGLSPTKVSEDSDCDSAELDHSGSGEGPPRPTAPPGL
SIO_010081: MAP3K12
subclass of: SO_0000673
so part of: MAP3K12
location: complement(join(170195..170287,170498..170750,170855..170925,171125..171563,171952..172089,172329..172445,172643..172752,172934..173042,173351..173509,173765..173922,174490..174681,175081..175264,175520..175846))
location: region:170195-175846:-1
so has part: feature:175520-175846:-1:exon
so has part: feature:175081-175264:-1:exon
so has part: feature:174490-174681:-1:exon
so has part: feature:173765-173922:-1:exon
so has part: feature:173351-173509:-1:exon
so has part: feature:172934-173042:-1:exon
so has part: feature:172643-172752:-1:exon
so has part: feature:172329-172445:-1:exon
so has part: feature:171952-172089:-1:exon
so has part: feature:171125-171563:-1:exon
so has part: feature:170855-170925:-1:exon
so has part: feature:170498-170750:-1:exon
so has part: feature:170195-170287:-1:exon

XP_048184313.1
type: Protein
SIO_000068: ncbiprotein

position:170195:-1
position: 170195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175846:-1
position: 175846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175520-175846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175081-175264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174490-174681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:173765-173922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173351-173509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:172934-173042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172643-172752:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:172329-172445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:171952-172089:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:171125-171563:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:170855-170925:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:170498-170750:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:170195-170287:-1:exon

TARBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 178713..182356
location: region:178713-182356:1
so has part: feature:178713-182356:1:exon
subclass of: SO_0000010

125337802
type: Gene
SIO_000068: ncbigene

position:178713:1
position: 178713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182356:1
position: 182356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178713-182356:1:exon

TARBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TARBP2
product: TARBP2 subunit of RISC loading complex
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327946.1
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: join(178713..178765,179439..179608,179920..180019,180381..180464,180551..180623,181130..181247,181327..181454,181696..181885,181990..182356)
location: region:178713-182356:1
so has part: feature:178713-178765:1:exon
so has part: feature:179439-179608:1:exon
so has part: feature:179920-180019:1:exon
so has part: feature:180381-180464:1:exon
so has part: feature:180551-180623:1:exon
so has part: feature:181130-181247:1:exon
so has part: feature:181327-181454:1:exon
so has part: feature:181696-181885:1:exon
so has part: feature:181990-182356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178713-178765:1:exon

position:178765:1
position: 178765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179439-179608:1:exon

position:179439:1
position: 179439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179608:1
position: 179608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:179920-180019:1:exon

position:179920:1
position: 179920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180019:1
position: 180019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:180381-180464:1:exon

position:180381:1
position: 180381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180464:1
position: 180464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180551-180623:1:exon

position:180551:1
position: 180551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180623:1
position: 180623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:181130-181247:1:exon

position:181130:1
position: 181130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181247:1
position: 181247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181327-181454:1:exon

position:181327:1
position: 181327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181454:1
position: 181454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:181696-181885:1:exon

position:181696:1
position: 181696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181885:1
position: 181885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:181990-182356:1:exon

position:181990:1
position: 181990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TARBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TARBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RISC-loading complex subunit TARBP2
translation: MSEEGAGGARRSGGAFPSLEQMVAASPGKTPISLLQEYGTRLGRTPGYDLLKAEGQAHQPNFTFRVTLGDISCTGQGPSKKAAKHKAAEVALRLLRGGGAMLEPLEHSSPFPPEPPAEPGPAAPPPAPAAPPPSPRGPPLEMKTPVSPPQSECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAAAKMLVRIHNVPMEPRDGSEAEGEEDQFNMTCPRLEGLRGRAPGCTWDSLRNSAGEKLGQLRSRGGPPAPGGACALLQELSEEQSFAISYLDIDALSLSGLHQCLVELSTQPTTVCHGAAPSRDGARAQAARNALQYLRIMAGGK
SIO_010081: TARBP2
subclass of: SO_0000673
so part of: TARBP2
location: join(178713..178765,179439..179608,179920..180019,180381..180464,180551..180623,181130..181247,181327..181454,181696..181885,181990..182147)
location: region:178713-182147:1
so has part: feature:178713-178765:1:exon
so has part: feature:179439-179608:1:exon
so has part: feature:179920-180019:1:exon
so has part: feature:180381-180464:1:exon
so has part: feature:180551-180623:1:exon
so has part: feature:181130-181247:1:exon
so has part: feature:181327-181454:1:exon
so has part: feature:181696-181885:1:exon
so has part: feature:181990-182147:1:exon

XP_048183903.1
type: Protein
SIO_000068: ncbiprotein

position:182147:1
position: 182147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178713-178765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179439-179608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179920-180019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180381-180464:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180551-180623:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181130-181247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181327-181454:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181696-181885:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:181990-182147:1:exon

NPFF
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: NPFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(182450..183279)
location: region:182450-183279:-1
so has part: feature:182450-183279:-1:exon
subclass of: SO_0000010

125337992
type: Gene
SIO_000068: ncbigene

position:182450:-1
position: 182450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183279:-1
position: 183279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182450-183279:-1:exon

NPFF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: NPFF
product: neuropeptide FF-amide peptide precursor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328306.1
SIO_010081: NPFF
subclass of: SO_0000673
so part of: NPFF
location: complement(join(182450..182655,182945..183031,183188..183279))
location: region:182450-183279:-1
so has part: feature:183188-183279:-1:exon
so has part: feature:182945-183031:-1:exon
so has part: feature:182450-182655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183188-183279:-1:exon

position:183188:-1
position: 183188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182945-183031:-1:exon

position:182945:-1
position: 182945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183031:-1
position: 183031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182450-182655:-1:exon

position:182655:-1
position: 182655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPFF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: NPFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-FMRFamide-related neuropeptide FF
translation: MAGRPVLLLLLLLAGTPRSARACPGPPARPRAAAAAALGALLRSLQRSGRAPGPPLQPQRSGWGPQGGAQARLSARSWDPPVAPFWTMATPQRFGRRR
SIO_010081: NPFF
subclass of: SO_0000673
so part of: NPFF
location: complement(join(182538..182655,182945..183031,183188..183279))
location: region:182538-183279:-1
so has part: feature:183188-183279:-1:exon
so has part: feature:182945-183031:-1:exon
so has part: feature:182538-182655:-1:exon

XP_048184263.1
type: Protein
SIO_000068: ncbiprotein

position:182538:-1
position: 182538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183188-183279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182945-183031:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182538-182655:-1:exon

LOC125337801
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(184099..231715)
location: region:184099-231715:-1
so has part: feature:184099-231715:-1:exon
subclass of: SO_0000010

125337801
type: Gene
SIO_000068: ncbigene

position:184099:-1
position: 184099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231715:-1
position: 231715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184099-231715:-1:exon

LOC125337801
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125337801
product: cyclic AMP-dependent transcription factor ATF-7-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_048327945.1
SIO_010081: LOC125337801
subclass of: SO_0000673
so part of: LOC125337801
location: complement(join(184099..187712,190014..190122,191058..191255,192044..192190,193165..193278,194560..194660,195401..195558,196235..196369,198987..199105,201456..201552,219059..219119,231630..231715))
location: region:184099-231715:-1
so has part: feature:231630-231715:-1:exon
so has part: feature:219059-219119:-1:exon
so has part: feature:201456-201552:-1:exon
so has part: feature:198987-199105:-1:exon
so has part: feature:196235-196369:-1:exon
so has part: feature:195401-195558:-1:exon
so has part: feature:194560-194660:-1:exon
so has part: feature:193165-193278:-1:exon
so has part: feature:192044-192190:-1:exon
so has part: feature:191058-191255:-1:exon
so has part: feature:190014-190122:-1:exon
so has part: feature:184099-187712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231630-231715:-1:exon

position:231630:-1
position: 231630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219059-219119:-1:exon

position:219059:-1
position: 219059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219119:-1
position: 219119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:201456-201552:-1:exon

position:201456:-1
position: 201456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201552:-1
position: 201552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:198987-199105:-1:exon

position:198987:-1
position: 198987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199105:-1
position: 199105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196235-196369:-1:exon

position:196235:-1
position: 196235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196369:-1
position: 196369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:195401-195558:-1:exon

position:195401:-1
position: 195401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195558:-1
position: 195558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:194560-194660:-1:exon

position:194560:-1
position: 194560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194660:-1
position: 194660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:193165-193278:-1:exon

position:193165:-1
position: 193165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193278:-1
position: 193278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:192044-192190:-1:exon

position:192044:-1
position: 192044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192190:-1
position: 192190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:191058-191255:-1:exon

position:191058:-1
position: 191058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191255:-1
position: 191255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:190014-190122:-1:exon

position:190014:-1
position: 190014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190122:-1
position: 190122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:184099-187712:-1:exon

position:187712:-1
position: 187712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125337801
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125337801
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cyclic AMP-dependent transcription factor ATF-7-like
translation: MGDDRPFVCGAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKAAEDDEKKSSGALDMSLPSTPDIKIKEEEPVEVDSSPPDSPASRPRSPQHKDKEGPSKPVILSTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQLGSPTGSLPLVVQLANGQTMPVLPGPPVQMPSVISLARPMSMVPNIPGIPGPPINSSGSISPSGLPVHSEAKMRLKASLTASSSLNGGSLVVGSASTMVTARPEQSQILVQHPDAPSPAQPQVSPAQPTPSTGGRRKRAVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLESPEGELGAHGLARAGPSSTAPPRPRPNGLSARSAAEAVATSVLAQMAGQRTELAVPVASHVIMAPQSQSAGR
SIO_010081: LOC125337801
subclass of: SO_0000673
so part of: LOC125337801
location: complement(join(187492..187712,190014..190122,191058..191255,192044..192190,193165..193278,194560..194660,195401..195558,196235..196369,198987..199105,201456..201552,219059..219106))
location: region:187492-219106:-1
so has part: feature:219059-219106:-1:exon
so has part: feature:201456-201552:-1:exon
so has part: feature:198987-199105:-1:exon
so has part: feature:196235-196369:-1:exon
so has part: feature:195401-195558:-1:exon
so has part: feature:194560-194660:-1:exon
so has part: feature:193165-193278:-1:exon
so has part: feature:192044-192190:-1:exon
so has part: feature:191058-191255:-1:exon
so has part: feature:190014-190122:-1:exon
so has part: feature:187492-187712:-1:exon

XP_048183902.1
type: Protein
SIO_000068: ncbiprotein

position:187492:-1
position: 187492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219106:-1
position: 219106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219059-219106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201456-201552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:198987-199105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196235-196369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195401-195558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194560-194660:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193165-193278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:192044-192190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191058-191255:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190014-190122:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187492-187712:-1:exon

LOC125337803
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337803
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 194776..200101
location: region:194776-200101:1
so has part: feature:194776-200101:1:exon
subclass of: SO_0000011

125337803
type: Gene
SIO_000068: ncbigene

position:194776:1
position: 194776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200101:1
position: 200101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194776-200101:1:exon

LOC125337803
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125337803
product: uncharacterized LOC125337803
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007208133.1
SIO_010081: LOC125337803
subclass of: SO_0000673
so part of: LOC125337803
location: join(194776..195177,198812..200101)
location: region:194776-200101:1
so has part: feature:194776-195177:1:exon
so has part: feature:198812-200101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194776-195177:1:exon

position:195177:1
position: 195177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198812-200101:1:exon

position:198812:1
position: 198812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP5MC2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ATP5MC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(232867..248710)
location: region:232867-248710:-1
so has part: feature:232867-248710:-1:exon
subclass of: SO_0000010

125337993
type: Gene
SIO_000068: ncbigene

position:232867:-1
position: 232867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248710:-1
position: 248710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232867-248710:-1:exon

ATP5MC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ATP5MC2
product: ATP synthase membrane subunit c locus 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328307.1
SIO_010081: ATP5MC2
subclass of: SO_0000673
so part of: ATP5MC2
location: complement(join(232867..233107,233222..233382,233505..233582,233962..234057,234621..234777,248457..248710))
location: region:232867-248710:-1
so has part: feature:248457-248710:-1:exon
so has part: feature:234621-234777:-1:exon
so has part: feature:233962-234057:-1:exon
so has part: feature:233505-233582:-1:exon
so has part: feature:233222-233382:-1:exon
so has part: feature:232867-233107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248457-248710:-1:exon

position:248457:-1
position: 248457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234621-234777:-1:exon

position:234621:-1
position: 234621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234777:-1
position: 234777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233962-234057:-1:exon

position:233962:-1
position: 233962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234057:-1
position: 234057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:233505-233582:-1:exon

position:233505:-1
position: 233505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233582:-1
position: 233582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:233222-233382:-1:exon

position:233222:-1
position: 233222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233382:-1
position: 233382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:232867-233107:-1:exon

position:233107:-1
position: 233107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5MC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATP5MC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C2, mitochondrial
translation: MKSIGLEPLQGLDRASSDKARWAPAKRRGPEPRGDTAASGPEGSRGTGALGNPSPATGFGFRRPPGAGLVATSGGGGTVATTGWSPPEGARGSAPPPRFSESSRPTGGAARSPAASPAALPAAPAHTERPRPARRSPPCPTCVPPAVSRTCPSVLAMFTCAKFVSAPALVRRSSRVLGHPLSAAALSSPEARPEQVWPGAPRALRTSAAHRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC2
subclass of: SO_0000673
so part of: ATP5MC2
location: complement(join(232993..233107,233222..233382,233505..233582,233962..234057,234621..234777,248457..248710))
location: region:232993-248710:-1
so has part: feature:248457-248710:-1:exon
so has part: feature:234621-234777:-1:exon
so has part: feature:233962-234057:-1:exon
so has part: feature:233505-233582:-1:exon
so has part: feature:233222-233382:-1:exon
so has part: feature:232993-233107:-1:exon

XP_048184264.1
type: Protein
SIO_000068: ncbiprotein

position:232993:-1
position: 232993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248457-248710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234621-234777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233962-234057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233505-233582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233222-233382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232993-233107:-1:exon

HOXC13
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: HOXC13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 272202..276290
location: region:272202-276290:1
so has part: feature:272202-276290:1:exon
subclass of: SO_0000010

125337907
type: Gene
SIO_000068: ncbigene

position:272202:1
position: 272202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276290:1
position: 276290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272202-276290:1:exon

HOXC13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HOXC13
product: homeobox C13
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_048328154.1
SIO_010081: HOXC13
subclass of: SO_0000673
so part of: HOXC13
location: join(272202..272839,275186..276290)
location: region:272202-276290:1
so has part: feature:272202-272839:1:exon
so has part: feature:275186-276290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272202-272839:1:exon

position:272839:1
position: 272839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275186-276290:1:exon

position:275186:1
position: 275186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HOXC13
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-C13
translation: MTAPLGLPPRWPDALGCRCEDAPREKSRMESLGHCREMMPHAGLAAPPPPPPPPPPAAAQGAAYAELAAAEPPRQCPSGAASGAALGYGYPFGAGYYGCRLSHGVNLQQKPCAYHPPEKYPEAGGPLAGEELPARAKEFAFYPGFPGSYQAVPGYLDVSVVPALGAHPEPRHEALLPMEGYQHWALSNGWDGQVYCSKEQSQSAHLWKSPFPDVVPLQPEVSSYRRGRKKRVPYTKIQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEKKVVSKSKPGHLHAT
SIO_010081: HOXC13
subclass of: SO_0000673
so part of: HOXC13
location: join(272202..272839,275186..275442)
location: region:272202-275442:1
so has part: feature:272202-272839:1:exon
so has part: feature:275186-275442:1:exon

XP_048184111.1
type: Protein
SIO_000068: ncbiprotein

position:275442:1
position: 275442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272202-272839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275186-275442:1:exon

HOXC12
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: HOXC12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 286161..288744
location: region:286161-288744:1
so has part: feature:286161-288744:1:exon
subclass of: SO_0000010

125338147
type: Gene
SIO_000068: ncbigene

position:286161:1
position: 286161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288744:1
position: 288744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286161-288744:1:exon

HOXC12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HOXC12
product: homeobox C12
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
transcript id: XM_048328524.1
SIO_010081: HOXC12
subclass of: SO_0000673
so part of: HOXC12
location: join(286161..286690,288506..288744)
location: region:286161-288744:1
so has part: feature:286161-286690:1:exon
so has part: feature:288506-288744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286161-286690:1:exon

position:286690:1
position: 286690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288506-288744:1:exon

position:288506:1
position: 288506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HOXC12
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-C12
translation: MGEHNLLNPGFVGPLVNIHTGDAFYFPNFRASGGQIPGLPSLSYPRRDNFGSLPAWASSEPCNGYPQPYLGTPVALNPGFGRACELARGDEGKCYYREGDKRDDRGRDSALLPLEPLPAAGMGGNFGKFEYPAAEGMAQDPPSCQSLESDSGSSLLNEGNKGDAAGLVSPLNAGSAGAPWYPMHTRSRKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLLLREQALSFF
SIO_010081: HOXC12
subclass of: SO_0000673
so part of: HOXC12
location: join(286161..286690,288506..288744)
location: region:286161-288744:1
so has part: feature:286161-286690:1:exon
so has part: feature:288506-288744:1:exon

XP_048184481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286161-286690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288506-288744:1:exon

HOXC11
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: HOXC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 307015..309304
location: region:307015-309304:1
so has part: feature:307015-309304:1:exon
subclass of: SO_0000010

125337926
type: Gene
SIO_000068: ncbigene

position:307015:1
position: 307015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309304:1
position: 309304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307015-309304:1:exon

HOXC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HOXC11
product: homeobox C11
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_048328186.1
SIO_010081: HOXC11
subclass of: SO_0000673
so part of: HOXC11
location: join(307015..307743,309008..309304)
location: region:307015-309304:1
so has part: feature:307015-307743:1:exon
so has part: feature:309008-309304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307015-307743:1:exon

position:307743:1
position: 307743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309008-309304:1:exon

position:309008:1
position: 309008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HOXC11
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein Hox-C11
translation: MFNSVNLGNFCSQSRKERSGDFGDRAGCASNLYLPSCTYYVPEFSTVSSFLPQAPSRQISYPYSANLAQVPAVPREVPYALEPSSKWHPRGNYASCYSAEELMHRECIPPAGMSEMLMKNESAYSHHHHHHHHHPPASSAPAPSGFYSGMSKNSVLPQGFDRFFENSSFCGAENAPESCAQKGDEGKAAAEALENAEEEEENTNPGSSSASSSSGAKESSKSGAASAPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQYFSGNPLL
SIO_010081: HOXC11
subclass of: SO_0000673
so part of: HOXC11
location: join(307067..307743,309008..309240)
location: region:307067-309240:1
so has part: feature:307067-307743:1:exon
so has part: feature:309008-309240:1:exon

XP_048184143.1
type: Protein
SIO_000068: ncbiprotein

position:307067:1
position: 307067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309240:1
position: 309240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307067-307743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309008-309240:1:exon

HOXC10
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 321197..325475
location: region:321197-325475:1
so has part: feature:321197-325475:1:exon
subclass of: SO_0000010

125337861
type: Gene
SIO_000068: ncbigene

position:321197:1
position: 321197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325475:1
position: 325475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321197-325475:1:exon

HOXC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HOXC10
product: homeobox C10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328060.1
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: join(321197..322029,324966..325475)
location: region:321197-325475:1
so has part: feature:321197-322029:1:exon
so has part: feature:324966-325475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321197-322029:1:exon

position:322029:1
position: 322029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324966-325475:1:exon

position:324966:1
position: 324966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HOXC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C10
translation: MSCPNNVTPNSFLMDSLSRGENFASGQGMFGQPGGDFGCGVMRNCGILPSLPKRDEVSLGSYPSYLAQLDTWADPKSAFRIEQPVARQLPSCSFPASVKEENVCCMFTAEKRAKNAPEGALFPSPLPESCLGEHEVPVPSYYRAGQGYPSLEKAQNCGNSADFEATFEARASLSARNEHLEAAPPPPPPPPPVVERISPKFQGNFPENAAAEQPPSEIKTEKSGAAGKGGAAEAEKELNKSTDTTSTDNSDSEAKEDIKAENATGNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRENRIRELTSNFNFT
SIO_010081: HOXC10
subclass of: SO_0000673
so part of: HOXC10
location: join(321264..322029,324966..325243)
location: region:321264-325243:1
so has part: feature:321264-322029:1:exon
so has part: feature:324966-325243:1:exon

XP_048184017.1
type: Protein
SIO_000068: ncbiprotein

position:321264:1
position: 321264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325243:1
position: 325243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321264-322029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324966-325243:1:exon

HOXC9
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: HOXC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 336017..339181
location: region:336017-339181:1
so has part: feature:336017-339181:1:exon
subclass of: SO_0000010

125338112
type: Gene
SIO_000068: ncbigene

position:336017:1
position: 336017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339181:1
position: 339181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336017-339181:1:exon

HOXC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HOXC9
product: homeobox C9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048328458.1
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: join(336017..336673,338569..339181)
location: region:336017-339181:1
so has part: feature:336017-336673:1:exon
so has part: feature:338569-339181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336017-336673:1:exon

position:336673:1
position: 336673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338569-339181:1:exon

position:338569:1
position: 338569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HOXC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-C9
translation: MSASGPISNYYVDSLIGHDNEELLASRFGGPGAARPAGLVPDCGDFPSCSFAPKPAVFTTSWAPVPSQPSVGYPHPHPPPPYGPQAAEPRYVRTWLEPLAGAVSFPAFGARPYGLKADAFGGRRAECGPSDGRGYADFMYGAPGELRDRAAQTIPSSPESEAIASSKHKEEKHELDPNNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMNKEKSDKEQQ
SIO_010081: HOXC9
subclass of: SO_0000673
so part of: HOXC9
location: join(336142..336673,338569..338813)
location: region:336142-338813:1
so has part: feature:336142-336673:1:exon
so has part: feature:338569-338813:1:exon

XP_048184415.1
type: Protein
SIO_000068: ncbiprotein

position:336142:1
position: 336142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338813:1
position: 338813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336142-336673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338569-338813:1:exon

FIGNL2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: FIGNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 430859..448461
location: region:430859-448461:1
so has part: feature:430859-448461:1:exon
subclass of: SO_0000010

125338045
type: Gene
SIO_000068: ncbigene

position:430859:1
position: 430859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448461:1
position: 448461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430859-448461:1:exon

FIGNL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: FIGNL2
product: fidgetin like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_048328359.1
SIO_010081: FIGNL2
subclass of: SO_0000673
so part of: FIGNL2
location: join(430859..430942,444439..448461)
location: region:430859-448461:1
so has part: feature:430859-430942:1:exon
so has part: feature:444439-448461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430859-430942:1:exon

position:430942:1
position: 430942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444439-448461:1:exon

position:444439:1
position: 444439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FIGNL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: FIGNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fidgetin-like protein 2
translation: MHWSPEHAQSLNQWPEQHLDVSSTTSSPAHKSDLYPSARQRFNYAWANDDISALTASNLLKRYAEKYSGVLDAPYERSTLSGYGDGAFGPVNGQKGDGEPWPGAHGSDGTYPLTPIHDGLPGAKGVVPPAVPAGSGAIGLGGSPVVSANLADPVYPGNSCGAAAAGSGGLGASQEYPSGYGGTYLPSSYCTQPAAALPPPHPPALHSSGLLQPPHPSPALVPGYGSSGPMYNYAASSYPPQPGYGGIHPPHPSASYLPSGIAAPTPIPAPPPTARPPGVPGYGYQGAGLGPLAVPPLGTEAAGTLKRKAFDIGGEDDGEGRYRKYSYEQPKSPYPMSDNGECRGNGFSGSGESPQVAFKPGKRPAGAGNSEEHGGKYGGQQMKGMVSPSYGARDAPLRPAEPFEKFSPPLANGERPAEPGAPFPLRLPSKALVFGGAPLEEQPKNVDPLVLELVNTKVVERGPPVQWSDIAGQVSVKAAIEEELVWPILRPGTYSGTSHPLRTLLLFGPRGTGKTLLSRCISTQLGSTLLRLSGTTLLSTWKAEAEKILQTVFFVANCRQPAVVLITEAESLLAARAGEDGSQVSNLKSQLLSYLDNVATSSEQNVVVIGTTARPGSIDEASHRRFGTRLYIPPPDGAARRHILRQALAQQSCCLSERELAALAQRTESFSGAELLRLCQHAGAARRALTGPPTCYQDLEKAFCKVRPAASQKELDLFLEWDKMYGTRH
SIO_010081: FIGNL2
subclass of: SO_0000673
so part of: FIGNL2
location: 444450..446639
location: region:444450-446639:1
so has part: feature:444450-446639:1:exon

XP_048184316.1
type: Protein
SIO_000068: ncbiprotein

position:444450:1
position: 444450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446639:1
position: 446639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444450-446639:1:exon

TMDD1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TMDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 449742..450398
location: region:449742-450398:1
so has part: feature:449742-450398:1:exon
subclass of: SO_0000010

125337994
type: Gene
SIO_000068: ncbigene

position:449742:1
position: 449742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450398:1
position: 450398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449742-450398:1:exon

TMDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TMDD1
product: transmembrane and death domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048328308.1
SIO_010081: TMDD1
subclass of: SO_0000673
so part of: TMDD1
location: 449742..450398
location: region:449742-450398:1
so has part: feature:449742-450398:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:449742-450398:1:exon

TMDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TMDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and death domain protein 1
translation: MLLHLGLVLLVLAVGSRCEDTVAATVGRHTMGRIAELLADSECHQLQVELNSPDEELGIPEPEHFSEENRPIRRRRGSRSPGGCSEALRHWLVTAGEVTTWDRLVRGLHQIGRSDVARELGKNLNQDRSLQLRRNVEGYSRSVQHLSSVQLQPGGARARRAPRNGHLLFERHRPPQYGRGLLGWVRPVVLGVLGAFLSSTLLTATAMYFCHWRRLLGA
SIO_010081: TMDD1
subclass of: SO_0000673
so part of: TMDD1
location: 449742..450398
location: region:449742-450398:1
so has part: feature:449742-450398:1:exon

XP_048184265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449742-450398:1:exon

LOC125337690
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 452936..453326
location: region:452936-453326:1
so has part: feature:452936-453326:1:exon
subclass of: SO_0000011

125337690
type: Gene
SIO_000068: ncbigene

position:452936:1
position: 452936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453326:1
position: 453326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452936-453326:1:exon

LOC125337690
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125337690
product: uncharacterized LOC125337690
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_007208119.1
SIO_010081: LOC125337690
subclass of: SO_0000673
so part of: LOC125337690
location: join(452936..453010,453127..453184,453272..453326)
location: region:452936-453326:1
so has part: feature:452936-453010:1:exon
so has part: feature:453127-453184:1:exon
so has part: feature:453272-453326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452936-453010:1:exon

position:453010:1
position: 453010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453127-453184:1:exon

position:453127:1
position: 453127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453184:1
position: 453184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:453272-453326:1:exon

position:453272:1
position: 453272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCN8A
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(455121..510395)
location: region:455121-510395:-1
so has part: feature:455121-510395:-1:exon
subclass of: SO_0000010

125337689
type: Gene
SIO_000068: ncbigene

position:455121:-1
position: 455121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510395:-1
position: 510395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455121-510395:-1:exon

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_048327666.1
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(455121..459142,460344..460614,461585..461689,462327..462464,463142..463195,463595..463879,467267..467389,471605..471778,472141..472295,473136..473253,473728..474198,475276..475632,476324..476497,476660..476898,478729..478864,480524..480883,481548..481835,482104..482310,482996..483137,483671..483734,484104..484325,487582..487673,490462..490590,490793..490882,492501..492619,501042..501371,510286..510395))
location: region:455121-510395:-1
so has part: feature:510286-510395:-1:exon
so has part: feature:501042-501371:-1:exon
so has part: feature:492501-492619:-1:exon
so has part: feature:490793-490882:-1:exon
so has part: feature:490462-490590:-1:exon
so has part: feature:487582-487673:-1:exon
so has part: feature:484104-484325:-1:exon
so has part: feature:483671-483734:-1:exon
so has part: feature:482996-483137:-1:exon
so has part: feature:482104-482310:-1:exon
so has part: feature:481548-481835:-1:exon
so has part: feature:480524-480883:-1:exon
so has part: feature:478729-478864:-1:exon
so has part: feature:476660-476898:-1:exon
so has part: feature:476324-476497:-1:exon
so has part: feature:475276-475632:-1:exon
so has part: feature:473728-474198:-1:exon
so has part: feature:473136-473253:-1:exon
so has part: feature:472141-472295:-1:exon
so has part: feature:471605-471778:-1:exon
so has part: feature:467267-467389:-1:exon
so has part: feature:463595-463879:-1:exon
so has part: feature:463142-463195:-1:exon
so has part: feature:462327-462464:-1:exon
so has part: feature:461585-461689:-1:exon
so has part: feature:460344-460614:-1:exon
so has part: feature:455121-459142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510286-510395:-1:exon

position:510286:-1
position: 510286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:501042-501371:-1:exon

position:501042:-1
position: 501042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501371:-1
position: 501371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:492501-492619:-1:exon

position:492501:-1
position: 492501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492619:-1
position: 492619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:490793-490882:-1:exon

position:490793:-1
position: 490793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490882:-1
position: 490882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:490462-490590:-1:exon

position:490462:-1
position: 490462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490590:-1
position: 490590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:487582-487673:-1:exon

position:487582:-1
position: 487582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487673:-1
position: 487673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:484104-484325:-1:exon

position:484104:-1
position: 484104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484325:-1
position: 484325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:483671-483734:-1:exon

position:483671:-1
position: 483671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483734:-1
position: 483734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:482996-483137:-1:exon

position:482996:-1
position: 482996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483137:-1
position: 483137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:482104-482310:-1:exon

position:482104:-1
position: 482104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482310:-1
position: 482310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:481548-481835:-1:exon

position:481548:-1
position: 481548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481835:-1
position: 481835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:480524-480883:-1:exon

position:480524:-1
position: 480524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480883:-1
position: 480883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:478729-478864:-1:exon

position:478729:-1
position: 478729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478864:-1
position: 478864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:476660-476898:-1:exon

position:476660:-1
position: 476660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476898:-1
position: 476898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:476324-476497:-1:exon

position:476324:-1
position: 476324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476497:-1
position: 476497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:475276-475632:-1:exon

position:475276:-1
position: 475276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475632:-1
position: 475632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:473728-474198:-1:exon

position:473728:-1
position: 473728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474198:-1
position: 474198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:473136-473253:-1:exon

position:473136:-1
position: 473136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473253:-1
position: 473253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:472141-472295:-1:exon

position:472141:-1
position: 472141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472295:-1
position: 472295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:471605-471778:-1:exon

position:471605:-1
position: 471605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471778:-1
position: 471778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:467267-467389:-1:exon

position:467267:-1
position: 467267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467389:-1
position: 467389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:463595-463879:-1:exon

position:463595:-1
position: 463595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463879:-1
position: 463879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:463142-463195:-1:exon

position:463142:-1
position: 463142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463195:-1
position: 463195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:462327-462464:-1:exon

position:462327:-1
position: 462327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462464:-1
position: 462464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:461585-461689:-1:exon

position:461585:-1
position: 461585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461689:-1
position: 461689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:460344-460614:-1:exon

position:460344:-1
position: 460344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460614:-1
position: 460614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:455121-459142:-1:exon

position:459142:-1
position: 459142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SCN8A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sodium channel protein type 8 subunit alpha
translation: MAARLLAPPGPESFKPFTPESLANIEKHIAELKKKQRSKQDSSHRDDDEDSKPKPNSDLEAGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGFDWEEYTNNMSNFYIIPGSTDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGDEKCDNEKVFKSESEDGMRRKVFRLPDNRLGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRSVKRNSTVDCNGVVSLIGGPPSSMPGGRILPEGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANMFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKINAECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADINRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDETSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEHRFEIDVVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVIQRAYRARLARRGFISRRPATTKLENGGANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQKDTRESKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(457994..459142,460344..460614,461585..461689,462327..462464,463142..463195,463595..463879,467267..467389,471605..471778,472141..472295,473136..473253,473728..474198,475276..475632,476324..476497,476660..476898,478729..478864,480524..480883,481548..481835,482104..482310,482996..483137,483671..483734,484104..484325,487582..487673,490462..490590,490793..490882,492501..492619,501042..501317))
location: region:457994-501317:-1
so has part: feature:501042-501317:-1:exon
so has part: feature:492501-492619:-1:exon
so has part: feature:490793-490882:-1:exon
so has part: feature:490462-490590:-1:exon
so has part: feature:487582-487673:-1:exon
so has part: feature:484104-484325:-1:exon
so has part: feature:483671-483734:-1:exon
so has part: feature:482996-483137:-1:exon
so has part: feature:482104-482310:-1:exon
so has part: feature:481548-481835:-1:exon
so has part: feature:480524-480883:-1:exon
so has part: feature:478729-478864:-1:exon
so has part: feature:476660-476898:-1:exon
so has part: feature:476324-476497:-1:exon
so has part: feature:475276-475632:-1:exon
so has part: feature:473728-474198:-1:exon
so has part: feature:473136-473253:-1:exon
so has part: feature:472141-472295:-1:exon
so has part: feature:471605-471778:-1:exon
so has part: feature:467267-467389:-1:exon
so has part: feature:463595-463879:-1:exon
so has part: feature:463142-463195:-1:exon
so has part: feature:462327-462464:-1:exon
so has part: feature:461585-461689:-1:exon
so has part: feature:460344-460614:-1:exon
so has part: feature:457994-459142:-1:exon

XP_048183623.1
type: Protein
SIO_000068: ncbiprotein

position:457994:-1
position: 457994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501317:-1
position: 501317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501042-501317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492501-492619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490793-490882:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:490462-490590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487582-487673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484104-484325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:483671-483734:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482996-483137:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:482104-482310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481548-481835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:480524-480883:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:478729-478864:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:476660-476898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:476324-476497:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:475276-475632:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473728-474198:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:473136-473253:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:472141-472295:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:471605-471778:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:467267-467389:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463595-463879:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:463142-463195:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:462327-462464:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:461585-461689:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:460344-460614:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:457994-459142:-1:exon

METTL7A
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: METTL7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 514362..517043
location: region:514362-517043:1
so has part: feature:514362-517043:1:exon
subclass of: SO_0000010

125338051
type: Gene
SIO_000068: ncbigene

position:514362:1
position: 514362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517043:1
position: 517043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514362-517043:1:exon

METTL7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: METTL7A
product: methyltransferase like 7A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328366.1
SIO_010081: METTL7A
subclass of: SO_0000673
so part of: METTL7A
location: join(514362..515188,516249..517043)
location: region:514362-517043:1
so has part: feature:514362-515188:1:exon
so has part: feature:516249-517043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514362-515188:1:exon

position:515188:1
position: 515188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516249-517043:1:exon

position:516249:1
position: 516249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METTL7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: METTL7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative methyltransferase-like protein 7A
translation: MPEAGASVLLLRACLALLASPIYLLSFLGMWEPFCRKVFFPFILDKIGVVHERKSKKHKQELFRNLPDFRGPSGELRLLEIGTGSGTNFQFYPPGCKITCTDINPHFQESLSRNMKKNEHLHYERFLVAAGEDLHQVPSGSVDAVVCTLVLCSVHSVSSTLKEVLRVLRPGGAFYFLEHVAAEHSSWKYFWQQVCYPTWKLIFAGCCLTRELWKNLEEAKFSELKIQHISVALPWMPIEPHIVGYGVK
SIO_010081: METTL7A
subclass of: SO_0000673
so part of: METTL7A
location: join(514679..515188,516249..516485)
location: region:514679-516485:1
so has part: feature:514679-515188:1:exon
so has part: feature:516249-516485:1:exon

XP_048184323.1
type: Protein
SIO_000068: ncbiprotein

position:514679:1
position: 514679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516485:1
position: 516485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514679-515188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516249-516485:1:exon

TMPRSS12
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: TMPRSS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 517571..523929
location: region:517571-523929:1
so has part: feature:517571-523929:1:exon
subclass of: SO_0000010

125337995
type: Gene
SIO_000068: ncbigene

position:517571:1
position: 517571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523929:1
position: 523929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517571-523929:1:exon

TMPRSS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: TMPRSS12
product: transmembrane serine protease 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_048328309.1
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: join(517571..517761,518626..518844,520834..521105,522139..522281,523536..523929)
location: region:517571-523929:1
so has part: feature:517571-517761:1:exon
so has part: feature:518626-518844:1:exon
so has part: feature:520834-521105:1:exon
so has part: feature:522139-522281:1:exon
so has part: feature:523536-523929:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517571-517761:1:exon

position:517761:1
position: 517761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518626-518844:1:exon

position:518626:1
position: 518626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518844:1
position: 518844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520834-521105:1:exon

position:520834:1
position: 520834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521105:1
position: 521105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:522139-522281:1:exon

position:522139:1
position: 522139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522281:1
position: 522281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:523536-523929:1:exon

position:523536:1
position: 523536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMPRSS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: TMPRSS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 12
translation: MQRARPAVPLLLLLLLLAGPLPGGTAPRDLGDGTGTQRDPAGPSGAGSGKGDASGEEPEQSGPWGPLYFAECQQQLPLARSVASWIVGGHEAPEGAWPWVVSLQVLRGGVRFVHLCGGVLLSRRAVLTAGHCVDGRTDPCSWRAVLGVHNLQKHSPHTAKRRIRRIIVHSEFKRETFENDVAVFELKSAVRHSLYVQPMCLPPAALILPLENSSDCYISGWGRTAEKGKISSVLKEAQVEILPPSLCNSSEGYAGLMDNRVLCAGAWAGGTDACQGDSGGPLVCYHPDTDKYYLIGIASFGVGCGRPKYPGIYVRLSQYRKWIKAKLRLTNTSRNPVSTTLTILLTVAHTVLAQTL
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: join(517571..517761,518626..518844,520834..521105,522139..522281,523536..523781)
location: region:517571-523781:1
so has part: feature:517571-517761:1:exon
so has part: feature:518626-518844:1:exon
so has part: feature:520834-521105:1:exon
so has part: feature:522139-522281:1:exon
so has part: feature:523536-523781:1:exon

XP_048184266.1
type: Protein
SIO_000068: ncbiprotein

position:523781:1
position: 523781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517571-517761:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518626-518844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520834-521105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:522139-522281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523536-523781:1:exon

ATF1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(524428..537114)
location: region:524428-537114:-1
so has part: feature:524428-537114:-1:exon
subclass of: SO_0000010

125337865
type: Gene
SIO_000068: ncbigene

position:524428:-1
position: 524428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537114:-1
position: 537114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524428-537114:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ATF1
product: activating transcription factor 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328066.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(524428..527351,528269..528428,528511..528690,529353..529483,529785..529885,531204..531332,532545..532658,536963..537114))
location: region:524428-537114:-1
so has part: feature:536963-537114:-1:exon
so has part: feature:532545-532658:-1:exon
so has part: feature:531204-531332:-1:exon
so has part: feature:529785-529885:-1:exon
so has part: feature:529353-529483:-1:exon
so has part: feature:528511-528690:-1:exon
so has part: feature:528269-528428:-1:exon
so has part: feature:524428-527351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536963-537114:-1:exon

position:536963:-1
position: 536963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:532545-532658:-1:exon

position:532545:-1
position: 532545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532658:-1
position: 532658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531204-531332:-1:exon

position:531204:-1
position: 531204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531332:-1
position: 531332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:529785-529885:-1:exon

position:529785:-1
position: 529785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529885:-1
position: 529885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:529353-529483:-1:exon

position:529353:-1
position: 529353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529483:-1
position: 529483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:528511-528690:-1:exon

position:528511:-1
position: 528511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528690:-1
position: 528690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:528269-528428:-1:exon

position:528269:-1
position: 528269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528428:-1
position: 528428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:524428-527351:-1:exon

position:527351:-1
position: 527351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ATF1
product: activating transcription factor 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328068.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(524428..527351,528269..528428,528511..528690,529353..529483,529785..529885,531204..531332,536963..537113))
location: region:524428-537113:-1
so has part: feature:536963-537113:-1:exon
so has part: feature:531204-531332:-1:exon
so has part: feature:529785-529885:-1:exon
so has part: feature:529353-529483:-1:exon
so has part: feature:528511-528690:-1:exon
so has part: feature:528269-528428:-1:exon
so has part: feature:524428-527351:-1:exon

position:537113:-1
position: 537113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536963-537113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531204-531332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529785-529885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529353-529483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528511-528690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528269-528428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524428-527351:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ATF1
product: activating transcription factor 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328067.1
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(524428..527351,528269..528428,528511..528690,529353..529483,529785..529885,531204..531332,532589..532658))
location: region:524428-532658:-1
so has part: feature:532589-532658:-1:exon
so has part: feature:531204-531332:-1:exon
so has part: feature:529785-529885:-1:exon
so has part: feature:529353-529483:-1:exon
so has part: feature:528511-528690:-1:exon
so has part: feature:528269-528428:-1:exon
so has part: feature:524428-527351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532589-532658:-1:exon

position:532589:-1
position: 532589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:531204-531332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529785-529885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529353-529483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528511-528690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528269-528428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524428-527351:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X1
translation: MMEEVHKGSSSSSVTSQPSAVQGTTLQAAQLSHIAQQMSLRGSAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSSQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLAGPGPDGVQGLQTLTMANASSSQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTSSLPQTVVMTSPVTLTSQTSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(527207..527351,528269..528428,528511..528690,529353..529483,529785..529885,531204..531332,532545..532655))
location: region:527207-532655:-1
so has part: feature:532545-532655:-1:exon
so has part: feature:531204-531332:-1:exon
so has part: feature:529785-529885:-1:exon
so has part: feature:529353-529483:-1:exon
so has part: feature:528511-528690:-1:exon
so has part: feature:528269-528428:-1:exon
so has part: feature:527207-527351:-1:exon

XP_048184023.1
type: Protein
SIO_000068: ncbiprotein

position:527207:-1
position: 527207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532655:-1
position: 532655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532545-532655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531204-531332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529785-529885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529353-529483:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528511-528690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528269-528428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:527207-527351:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X2
translation: MSLRGSAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSSQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLAGPGPDGVQGLQTLTMANASSSQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTSSLPQTVVMTSPVTLTSQTSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(527207..527351,528269..528428,528511..528690,529353..529483,529785..529885,531204..531332))
location: region:527207-531332:-1
so has part: feature:531204-531332:-1:exon
so has part: feature:529785-529885:-1:exon
so has part: feature:529353-529483:-1:exon
so has part: feature:528511-528690:-1:exon
so has part: feature:528269-528428:-1:exon
so has part: feature:527207-527351:-1:exon

XP_048184024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531204-531332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529785-529885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529353-529483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528511-528690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528269-528428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527207-527351:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X2
translation: MSLRGSAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSSQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLAGPGPDGVQGLQTLTMANASSSQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTSSLPQTVVMTSPVTLTSQTSKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(527207..527351,528269..528428,528511..528690,529353..529483,529785..529885,531204..531332))
location: region:527207-531332:-1
so has part: feature:531204-531332:-1:exon
so has part: feature:529785-529885:-1:exon
so has part: feature:529353-529483:-1:exon
so has part: feature:528511-528690:-1:exon
so has part: feature:528269-528428:-1:exon
so has part: feature:527207-527351:-1:exon

XP_048184025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531204-531332:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529785-529885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529353-529483:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528511-528690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528269-528428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:527207-527351:-1:exon

DIP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(538448..601027)
location: region:538448-601027:-1
so has part: feature:538448-601027:-1:exon
subclass of: SO_0000010

125337719
type: Gene
SIO_000068: ncbigene

position:538448:-1
position: 538448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601027:-1
position: 601027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538448-601027:-1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327753.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(538448..541898,542335..542458,543164..543341,543906..543980,544501..544558,544681..544742,545224..545394,546338..546506,547037..547167,547922..548031,548481..548592,549245..549366,549741..549864,550071..550166,550386..550466,550588..550697,551061..551262,553308..553422,554142..554269,554388..554468,554768..554904,555108..555247,555833..555947,556514..556633,557377..557470,557975..558039,559020..559122,559833..559942,560449..560572,561758..561868,562293..562384,562614..562811,563411..563530,563813..563956,568099..568224,568735..568872,573736..573807,600895..601027))
location: region:538448-601027:-1
so has part: feature:600895-601027:-1:exon
so has part: feature:573736-573807:-1:exon
so has part: feature:568735-568872:-1:exon
so has part: feature:568099-568224:-1:exon
so has part: feature:563813-563956:-1:exon
so has part: feature:563411-563530:-1:exon
so has part: feature:562614-562811:-1:exon
so has part: feature:562293-562384:-1:exon
so has part: feature:561758-561868:-1:exon
so has part: feature:560449-560572:-1:exon
so has part: feature:559833-559942:-1:exon
so has part: feature:559020-559122:-1:exon
so has part: feature:557975-558039:-1:exon
so has part: feature:557377-557470:-1:exon
so has part: feature:556514-556633:-1:exon
so has part: feature:555833-555947:-1:exon
so has part: feature:555108-555247:-1:exon
so has part: feature:554768-554904:-1:exon
so has part: feature:554388-554468:-1:exon
so has part: feature:554142-554269:-1:exon
so has part: feature:553308-553422:-1:exon
so has part: feature:551061-551262:-1:exon
so has part: feature:550588-550697:-1:exon
so has part: feature:550386-550466:-1:exon
so has part: feature:550071-550166:-1:exon
so has part: feature:549741-549864:-1:exon
so has part: feature:549245-549366:-1:exon
so has part: feature:548481-548592:-1:exon
so has part: feature:547922-548031:-1:exon
so has part: feature:547037-547167:-1:exon
so has part: feature:546338-546506:-1:exon
so has part: feature:545224-545394:-1:exon
so has part: feature:544681-544742:-1:exon
so has part: feature:544501-544558:-1:exon
so has part: feature:543906-543980:-1:exon
so has part: feature:543164-543341:-1:exon
so has part: feature:542335-542458:-1:exon
so has part: feature:538448-541898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:600895-601027:-1:exon

position:600895:-1
position: 600895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:573736-573807:-1:exon

position:573736:-1
position: 573736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573807:-1
position: 573807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:568735-568872:-1:exon

position:568735:-1
position: 568735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568872:-1
position: 568872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:568099-568224:-1:exon

position:568099:-1
position: 568099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568224:-1
position: 568224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:563813-563956:-1:exon

position:563813:-1
position: 563813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563956:-1
position: 563956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:563411-563530:-1:exon

position:563411:-1
position: 563411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563530:-1
position: 563530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:562614-562811:-1:exon

position:562614:-1
position: 562614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562811:-1
position: 562811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:562293-562384:-1:exon

position:562293:-1
position: 562293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562384:-1
position: 562384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:561758-561868:-1:exon

position:561758:-1
position: 561758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561868:-1
position: 561868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:560449-560572:-1:exon

position:560449:-1
position: 560449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560572:-1
position: 560572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:559833-559942:-1:exon

position:559833:-1
position: 559833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559942:-1
position: 559942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:559020-559122:-1:exon

position:559020:-1
position: 559020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559122:-1
position: 559122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:557975-558039:-1:exon

position:557975:-1
position: 557975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558039:-1
position: 558039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:557377-557470:-1:exon

position:557377:-1
position: 557377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557470:-1
position: 557470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:556514-556633:-1:exon

position:556514:-1
position: 556514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556633:-1
position: 556633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:555833-555947:-1:exon

position:555833:-1
position: 555833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555947:-1
position: 555947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:555108-555247:-1:exon

position:555108:-1
position: 555108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555247:-1
position: 555247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:554768-554904:-1:exon

position:554768:-1
position: 554768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554904:-1
position: 554904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:554388-554468:-1:exon

position:554388:-1
position: 554388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554468:-1
position: 554468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:554142-554269:-1:exon

position:554142:-1
position: 554142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554269:-1
position: 554269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:553308-553422:-1:exon

position:553308:-1
position: 553308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553422:-1
position: 553422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:551061-551262:-1:exon

position:551061:-1
position: 551061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551262:-1
position: 551262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:550588-550697:-1:exon

position:550588:-1
position: 550588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550697:-1
position: 550697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:550386-550466:-1:exon

position:550386:-1
position: 550386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550466:-1
position: 550466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:550071-550166:-1:exon

position:550071:-1
position: 550071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550166:-1
position: 550166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:549741-549864:-1:exon

position:549741:-1
position: 549741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549864:-1
position: 549864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:549245-549366:-1:exon

position:549245:-1
position: 549245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549366:-1
position: 549366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:548481-548592:-1:exon

position:548481:-1
position: 548481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548592:-1
position: 548592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:547922-548031:-1:exon

position:547922:-1
position: 547922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548031:-1
position: 548031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:547037-547167:-1:exon

position:547037:-1
position: 547037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547167:-1
position: 547167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:546338-546506:-1:exon

position:546338:-1
position: 546338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546506:-1
position: 546506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:545224-545394:-1:exon

position:545224:-1
position: 545224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545394:-1
position: 545394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:544681-544742:-1:exon

position:544681:-1
position: 544681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544742:-1
position: 544742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:544501-544558:-1:exon

position:544501:-1
position: 544501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544558:-1
position: 544558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:543906-543980:-1:exon

position:543906:-1
position: 543906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543980:-1
position: 543980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:543164-543341:-1:exon

position:543164:-1
position: 543164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543341:-1
position: 543341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:542335-542458:-1:exon

position:542335:-1
position: 542335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542458:-1
position: 542458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:538448-541898:-1:exon

position:541898:-1
position: 541898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327750.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(538448..541898,542335..542458,543164..543341,543906..543980,544501..544558,544681..544742,545224..545394,546338..546506,547037..547167,547922..548031,548481..548592,549245..549366,549741..549864,550071..550166,550386..550466,550588..550697,551061..551262,553308..553422,554142..554269,554388..554468,554768..554904,555108..555247,555833..555947,556514..556633,557377..557470,557975..558039,559020..559122,559833..559942,560449..560572,561776..561868,562293..562384,562614..562811,563411..563530,563813..563956,566211..566423,568099..568224,568735..568872,573736..573807,600895..601027))
location: region:538448-601027:-1
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urn:…
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:568099-568224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566211-566423:-1:exon

position:566211:-1
position: 566211
reference: sequence
type: ReverseStrandPosition
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position:566423:-1
position: 566423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:563813-563956:-1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
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urn:…
SIO_000300: 10
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position:561776:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:560449-560572:-1:exon

urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:559020-559122:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:557975-558039:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:557377-557470:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:556514-556633:-1:exon

urn:…
SIO_000300: 17
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urn:…
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SIO_000300: 20
SIO_000628: feature:554388-554468:-1:exon

urn:…
SIO_000300: 21
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:550386-550466:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:550071-550166:-1:exon

urn:…
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urn:…
SIO_000300: 28
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SIO_000300: 29
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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
SIO_000628: feature:547037-547167:-1:exon

urn:…
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urn:…
SIO_000300: 33
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urn:…
SIO_000300: 34
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urn:…
SIO_000300: 35
SIO_000628: feature:544501-544558:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:543906-543980:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:543164-543341:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:542335-542458:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:538448-541898:-1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327749.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(538448..541898,542335..542458,543164..543341,543906..543980,544501..544558,544681..544742,545224..545394,546338..546506,547037..547167,547922..548031,548481..548592,549245..549366,549741..549864,550071..550166,550386..550466,550588..550697,551061..551262,553308..553422,554142..554269,554388..554468,554768..554904,555108..555247,555833..555947,556514..556633,557377..557470,557975..558039,559020..559122,559833..559942,560449..560572,561758..561868,562293..562384,562614..562811,563411..563530,563813..563956,566211..566423,568099..568224,568735..568872,573736..573807,600895..601027))
location: region:538448-601027:-1
so has part: feature:600895-601027:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:600895-601027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573736-573807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568735-568872:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
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urn:…
SIO_000300: 7
SIO_000628: feature:563411-563530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562614-562811:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:562293-562384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561758-561868:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:557975-558039:-1:exon

urn:…
SIO_000300: 15
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urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:555833-555947:-1:exon

urn:…
SIO_000300: 18
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urn:…
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urn:…
SIO_000300: 20
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
SIO_000628: feature:547037-547167:-1:exon

urn:…
SIO_000300: 32
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urn:…
SIO_000300: 33
SIO_000628: feature:545224-545394:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544681-544742:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:544501-544558:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:543906-543980:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:543164-543341:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:542335-542458:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:538448-541898:-1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327752.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(538448..541898,542335..542458,543164..543341,543906..543980,544501..544558,544681..544742,545224..545394,546338..546506,547037..547167,547922..548031,548481..548592,549245..549366,549741..549864,550386..550466,550588..550697,551061..551262,553308..553422,554142..554269,554388..554468,554768..554904,555108..555247,555833..555947,556514..556633,557377..557470,557975..558039,559020..559122,559833..559942,560449..560572,561758..561868,562293..562384,562614..562811,563411..563530,563813..563956,566211..566423,568099..568224,568735..568872,573736..573807,600895..601026))
location: region:538448-601026:-1
so has part: feature:600895-601026:-1:exon
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so has part: feature:543164-543341:-1:exon
so has part: feature:542335-542458:-1:exon
so has part: feature:538448-541898:-1:exon

position:601026:-1
position: 601026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600895-601026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573736-573807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568735-568872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568099-568224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566211-566423:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:562614-562811:-1:exon

urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:561758-561868:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:560449-560572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559833-559942:-1:exon

urn:…
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urn:…
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urn:…
SIO_000300: 15
SIO_000628: feature:557377-557470:-1:exon

urn:…
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urn:…
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
SIO_000628: feature:554388-554468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:554142-554269:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553308-553422:-1:exon

urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
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urn:…
SIO_000300: 27
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urn:…
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urn:…
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urn:…
SIO_000300: 30
SIO_000628: feature:547037-547167:-1:exon

urn:…
SIO_000300: 31
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urn:…
SIO_000300: 32
SIO_000628: feature:545224-545394:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544681-544742:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544501-544558:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:543906-543980:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:543164-543341:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:542335-542458:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:538448-541898:-1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327751.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(538448..541898,542335..542458,543164..543341,543906..543980,544501..544558,544681..544742,545224..545394,546338..546506,547037..547167,547922..548031,548481..548592,549245..549366,549741..549864,550071..550166,550386..550466,550588..550697,551061..551262,553308..553422,554142..554269,554388..554468,554768..554904,555108..555247,555833..555947,556514..556633,557377..557470,557975..558039,559020..559122,559833..559942,560449..560572,561758..561868,562293..562384,562614..562811,563411..563530,563813..563956,566211..566423,568099..568224,568735..568872,573736..573807,584780..584801))
location: region:538448-584801:-1
so has part: feature:584780-584801:-1:exon
so has part: feature:573736-573807:-1:exon
so has part: feature:568735-568872:-1:exon
so has part: feature:568099-568224:-1:exon
so has part: feature:566211-566423:-1:exon
so has part: feature:563813-563956:-1:exon
so has part: feature:563411-563530:-1:exon
so has part: feature:562614-562811:-1:exon
so has part: feature:562293-562384:-1:exon
so has part: feature:561758-561868:-1:exon
so has part: feature:560449-560572:-1:exon
so has part: feature:559833-559942:-1:exon
so has part: feature:559020-559122:-1:exon
so has part: feature:557975-558039:-1:exon
so has part: feature:557377-557470:-1:exon
so has part: feature:556514-556633:-1:exon
so has part: feature:555833-555947:-1:exon
so has part: feature:555108-555247:-1:exon
so has part: feature:554768-554904:-1:exon
so has part: feature:554388-554468:-1:exon
so has part: feature:554142-554269:-1:exon
so has part: feature:553308-553422:-1:exon
so has part: feature:551061-551262:-1:exon
so has part: feature:550588-550697:-1:exon
so has part: feature:550386-550466:-1:exon
so has part: feature:550071-550166:-1:exon
so has part: feature:549741-549864:-1:exon
so has part: feature:549245-549366:-1:exon
so has part: feature:548481-548592:-1:exon
so has part: feature:547922-548031:-1:exon
so has part: feature:547037-547167:-1:exon
so has part: feature:546338-546506:-1:exon
so has part: feature:545224-545394:-1:exon
so has part: feature:544681-544742:-1:exon
so has part: feature:544501-544558:-1:exon
so has part: feature:543906-543980:-1:exon
so has part: feature:543164-543341:-1:exon
so has part: feature:542335-542458:-1:exon
so has part: feature:538448-541898:-1:exon

position:584801:-1
position: 584801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584780-584801:-1:exon

position:584780:-1
position: 584780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:573736-573807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568735-568872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568099-568224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566211-566423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563813-563956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563411-563530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562614-562811:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:562293-562384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561758-561868:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:560449-560572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559833-559942:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559020-559122:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:557975-558039:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:557377-557470:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:556514-556633:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:555833-555947:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:555108-555247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:554768-554904:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:554388-554468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:554142-554269:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553308-553422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:551061-551262:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:550588-550697:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:550386-550466:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:550071-550166:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:549741-549864:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:549245-549366:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:548481-548592:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:547922-548031:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:547037-547167:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:546338-546506:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:545224-545394:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544681-544742:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:544501-544558:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:543906-543980:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:543164-543341:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:542335-542458:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:538448-541898:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X5
translation: MAEPAAVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRPQMPVPSATPASASSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPESFSVPPDVTATTSTPSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRVAMLAHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTVAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMIYYGLAGVTKNTFEVIPVNSSGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKVPLVPVSVNAVSLLSIFWQGSGARRPELTPWKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYSGCVPVTVRPPHAQSLVATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAGAVDVKTWPTIIDTDDLPRKRPAQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(541646..541898,542335..542458,543164..543341,543906..543980,544501..544558,544681..544742,545224..545394,546338..546506,547037..547167,547922..548031,548481..548592,549245..549366,549741..549864,550071..550166,550386..550466,550588..550697,551061..551262,553308..553422,554142..554269,554388..554468,554768..554904,555108..555247,555833..555947,556514..556633,557377..557470,557975..558039,559020..559122,559833..559942,560449..560572,561758..561868,562293..562384,562614..562811,563411..563530,563813..563956,568099..568224,568735..568872,573736..573807,600895..600976))
location: region:541646-600976:-1
so has part: feature:600895-600976:-1:exon
so has part: feature:573736-573807:-1:exon
so has part: feature:568735-568872:-1:exon
so has part: feature:568099-568224:-1:exon
so has part: feature:563813-563956:-1:exon
so has part: feature:563411-563530:-1:exon
so has part: feature:562614-562811:-1:exon
so has part: feature:562293-562384:-1:exon
so has part: feature:561758-561868:-1:exon
so has part: feature:560449-560572:-1:exon
so has part: feature:559833-559942:-1:exon
so has part: feature:559020-559122:-1:exon
so has part: feature:557975-558039:-1:exon
so has part: feature:557377-557470:-1:exon
so has part: feature:556514-556633:-1:exon
so has part: feature:555833-555947:-1:exon
so has part: feature:555108-555247:-1:exon
so has part: feature:554768-554904:-1:exon
so has part: feature:554388-554468:-1:exon
so has part: feature:554142-554269:-1:exon
so has part: feature:553308-553422:-1:exon
so has part: feature:551061-551262:-1:exon
so has part: feature:550588-550697:-1:exon
so has part: feature:550386-550466:-1:exon
so has part: feature:550071-550166:-1:exon
so has part: feature:549741-549864:-1:exon
so has part: feature:549245-549366:-1:exon
so has part: feature:548481-548592:-1:exon
so has part: feature:547922-548031:-1:exon
so has part: feature:547037-547167:-1:exon
so has part: feature:546338-546506:-1:exon
so has part: feature:545224-545394:-1:exon
so has part: feature:544681-544742:-1:exon
so has part: feature:544501-544558:-1:exon
so has part: feature:543906-543980:-1:exon
so has part: feature:543164-543341:-1:exon
so has part: feature:542335-542458:-1:exon
so has part: feature:541646-541898:-1:exon

XP_048183710.1
type: Protein
SIO_000068: ncbiprotein

position:541646:-1
position: 541646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600976:-1
position: 600976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600895-600976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573736-573807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568735-568872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568099-568224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563813-563956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563411-563530:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562614-562811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562293-562384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:561758-561868:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:560449-560572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:559833-559942:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559020-559122:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:557975-558039:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:557377-557470:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:556514-556633:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555833-555947:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:555108-555247:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:554768-554904:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:554388-554468:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:554142-554269:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:553308-553422:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:551061-551262:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:550588-550697:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:550386-550466:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:550071-550166:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:549741-549864:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:549245-549366:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:548481-548592:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:547922-548031:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:547037-547167:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:546338-546506:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:545224-545394:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544681-544742:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544501-544558:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:543906-543980:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:543164-543341:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:542335-542458:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:541646-541898:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X2
translation: MAEPAAVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRPQMPVPSATPASASSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSVQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIESFSVPPDVTATTSTPSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRVAMLAHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTVAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMIYYGLAGVTKNTFEVIPVNSSGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKVPLVPVSVNAVSLLSIFWQGSGARRPELTPWKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYSGCVPVTVRPPHAQSLVATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAGAVDVKTWPTIIDTDDLPRKRPAQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(541646..541898,542335..542458,543164..543341,543906..543980,544501..544558,544681..544742,545224..545394,546338..546506,547037..547167,547922..548031,548481..548592,549245..549366,549741..549864,550071..550166,550386..550466,550588..550697,551061..551262,553308..553422,554142..554269,554388..554468,554768..554904,555108..555247,555833..555947,556514..556633,557377..557470,557975..558039,559020..559122,559833..559942,560449..560572,561776..561868,562293..562384,562614..562811,563411..563530,563813..563956,566211..566423,568099..568224,568735..568872,573736..573807,600895..600976))
location: region:541646-600976:-1
so has part: feature:600895-600976:-1:exon
so has part: feature:573736-573807:-1:exon
so has part: feature:568735-568872:-1:exon
so has part: feature:568099-568224:-1:exon
so has part: feature:566211-566423:-1:exon
so has part: feature:563813-563956:-1:exon
so has part: feature:563411-563530:-1:exon
so has part: feature:562614-562811:-1:exon
so has part: feature:562293-562384:-1:exon
so has part: feature:561776-561868:-1:exon
so has part: feature:560449-560572:-1:exon
so has part: feature:559833-559942:-1:exon
so has part: feature:559020-559122:-1:exon
so has part: feature:557975-558039:-1:exon
so has part: feature:557377-557470:-1:exon
so has part: feature:556514-556633:-1:exon
so has part: feature:555833-555947:-1:exon
so has part: feature:555108-555247:-1:exon
so has part: feature:554768-554904:-1:exon
so has part: feature:554388-554468:-1:exon
so has part: feature:554142-554269:-1:exon
so has part: feature:553308-553422:-1:exon
so has part: feature:551061-551262:-1:exon
so has part: feature:550588-550697:-1:exon
so has part: feature:550386-550466:-1:exon
so has part: feature:550071-550166:-1:exon
so has part: feature:549741-549864:-1:exon
so has part: feature:549245-549366:-1:exon
so has part: feature:548481-548592:-1:exon
so has part: feature:547922-548031:-1:exon
so has part: feature:547037-547167:-1:exon
so has part: feature:546338-546506:-1:exon
so has part: feature:545224-545394:-1:exon
so has part: feature:544681-544742:-1:exon
so has part: feature:544501-544558:-1:exon
so has part: feature:543906-543980:-1:exon
so has part: feature:543164-543341:-1:exon
so has part: feature:542335-542458:-1:exon
so has part: feature:541646-541898:-1:exon

XP_048183707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600895-600976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573736-573807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568735-568872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568099-568224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566211-566423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563813-563956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563411-563530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562614-562811:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:562293-562384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561776-561868:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:560449-560572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559833-559942:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559020-559122:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:557975-558039:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:557377-557470:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:556514-556633:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:555833-555947:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:555108-555247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:554768-554904:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:554388-554468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:554142-554269:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553308-553422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:551061-551262:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:550588-550697:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:550386-550466:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:550071-550166:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:549741-549864:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:549245-549366:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:548481-548592:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:547922-548031:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:547037-547167:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:546338-546506:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:545224-545394:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544681-544742:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:544501-544558:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:543906-543980:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:543164-543341:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:542335-542458:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:541646-541898:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X4
translation: MAEPAAVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRPQMPVPSATPASASSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSVQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIESFSVPPDVTATTSTPSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRVAMLAHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTVAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMIYYGLAGVTKNTFEVIPVNSSGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYSGCVPVTVRPPHAQSLVATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAGAVDVKTWPTIIDTDDLPRKRPAQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(541646..541898,542335..542458,543164..543341,543906..543980,544501..544558,544681..544742,545224..545394,546338..546506,547037..547167,547922..548031,548481..548592,549245..549366,549741..549864,550386..550466,550588..550697,551061..551262,553308..553422,554142..554269,554388..554468,554768..554904,555108..555247,555833..555947,556514..556633,557377..557470,557975..558039,559020..559122,559833..559942,560449..560572,561758..561868,562293..562384,562614..562811,563411..563530,563813..563956,566211..566423,568099..568224,568735..568872,573736..573807,600895..600976))
location: region:541646-600976:-1
so has part: feature:600895-600976:-1:exon
so has part: feature:573736-573807:-1:exon
so has part: feature:568735-568872:-1:exon
so has part: feature:568099-568224:-1:exon
so has part: feature:566211-566423:-1:exon
so has part: feature:563813-563956:-1:exon
so has part: feature:563411-563530:-1:exon
so has part: feature:562614-562811:-1:exon
so has part: feature:562293-562384:-1:exon
so has part: feature:561758-561868:-1:exon
so has part: feature:560449-560572:-1:exon
so has part: feature:559833-559942:-1:exon
so has part: feature:559020-559122:-1:exon
so has part: feature:557975-558039:-1:exon
so has part: feature:557377-557470:-1:exon
so has part: feature:556514-556633:-1:exon
so has part: feature:555833-555947:-1:exon
so has part: feature:555108-555247:-1:exon
so has part: feature:554768-554904:-1:exon
so has part: feature:554388-554468:-1:exon
so has part: feature:554142-554269:-1:exon
so has part: feature:553308-553422:-1:exon
so has part: feature:551061-551262:-1:exon
so has part: feature:550588-550697:-1:exon
so has part: feature:550386-550466:-1:exon
so has part: feature:549741-549864:-1:exon
so has part: feature:549245-549366:-1:exon
so has part: feature:548481-548592:-1:exon
so has part: feature:547922-548031:-1:exon
so has part: feature:547037-547167:-1:exon
so has part: feature:546338-546506:-1:exon
so has part: feature:545224-545394:-1:exon
so has part: feature:544681-544742:-1:exon
so has part: feature:544501-544558:-1:exon
so has part: feature:543906-543980:-1:exon
so has part: feature:543164-543341:-1:exon
so has part: feature:542335-542458:-1:exon
so has part: feature:541646-541898:-1:exon

XP_048183709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600895-600976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573736-573807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568735-568872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568099-568224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566211-566423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563813-563956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563411-563530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562614-562811:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:562293-562384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561758-561868:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:560449-560572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559833-559942:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559020-559122:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:557975-558039:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:557377-557470:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:556514-556633:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:555833-555947:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:555108-555247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:554768-554904:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:554388-554468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:554142-554269:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553308-553422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:551061-551262:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:550588-550697:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:550386-550466:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:549741-549864:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:549245-549366:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:548481-548592:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:547922-548031:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:547037-547167:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:546338-546506:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:545224-545394:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:544681-544742:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544501-544558:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:543906-543980:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:543164-543341:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:542335-542458:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:541646-541898:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X1
translation: MAEPAAVSSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRPQMPVPSATPASASSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSVQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIESFSVPPDVTATTSTPSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRVAMLAHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTVAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMIYYGLAGVTKNTFEVIPVNSSGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKVPLVPVSVNAVSLLSIFWQGSGARRPELTPWKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYSGCVPVTVRPPHAQSLVATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAGAVDVKTWPTIIDTDDLPRKRPAQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(541646..541898,542335..542458,543164..543341,543906..543980,544501..544558,544681..544742,545224..545394,546338..546506,547037..547167,547922..548031,548481..548592,549245..549366,549741..549864,550071..550166,550386..550466,550588..550697,551061..551262,553308..553422,554142..554269,554388..554468,554768..554904,555108..555247,555833..555947,556514..556633,557377..557470,557975..558039,559020..559122,559833..559942,560449..560572,561758..561868,562293..562384,562614..562811,563411..563530,563813..563956,566211..566423,568099..568224,568735..568872,573736..573807,600895..600976))
location: region:541646-600976:-1
so has part: feature:600895-600976:-1:exon
so has part: feature:573736-573807:-1:exon
so has part: feature:568735-568872:-1:exon
so has part: feature:568099-568224:-1:exon
so has part: feature:566211-566423:-1:exon
so has part: feature:563813-563956:-1:exon
so has part: feature:563411-563530:-1:exon
so has part: feature:562614-562811:-1:exon
so has part: feature:562293-562384:-1:exon
so has part: feature:561758-561868:-1:exon
so has part: feature:560449-560572:-1:exon
so has part: feature:559833-559942:-1:exon
so has part: feature:559020-559122:-1:exon
so has part: feature:557975-558039:-1:exon
so has part: feature:557377-557470:-1:exon
so has part: feature:556514-556633:-1:exon
so has part: feature:555833-555947:-1:exon
so has part: feature:555108-555247:-1:exon
so has part: feature:554768-554904:-1:exon
so has part: feature:554388-554468:-1:exon
so has part: feature:554142-554269:-1:exon
so has part: feature:553308-553422:-1:exon
so has part: feature:551061-551262:-1:exon
so has part: feature:550588-550697:-1:exon
so has part: feature:550386-550466:-1:exon
so has part: feature:550071-550166:-1:exon
so has part: feature:549741-549864:-1:exon
so has part: feature:549245-549366:-1:exon
so has part: feature:548481-548592:-1:exon
so has part: feature:547922-548031:-1:exon
so has part: feature:547037-547167:-1:exon
so has part: feature:546338-546506:-1:exon
so has part: feature:545224-545394:-1:exon
so has part: feature:544681-544742:-1:exon
so has part: feature:544501-544558:-1:exon
so has part: feature:543906-543980:-1:exon
so has part: feature:543164-543341:-1:exon
so has part: feature:542335-542458:-1:exon
so has part: feature:541646-541898:-1:exon

XP_048183706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:600895-600976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573736-573807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568735-568872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568099-568224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566211-566423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563813-563956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563411-563530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562614-562811:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:562293-562384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561758-561868:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:560449-560572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559833-559942:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559020-559122:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:557975-558039:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:557377-557470:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:556514-556633:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:555833-555947:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:555108-555247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:554768-554904:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:554388-554468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:554142-554269:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553308-553422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:551061-551262:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:550588-550697:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:550386-550466:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:550071-550166:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:549741-549864:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:549245-549366:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:548481-548592:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:547922-548031:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:547037-547167:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:546338-546506:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:545224-545394:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544681-544742:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:544501-544558:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:543906-543980:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:543164-543341:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:542335-542458:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:541646-541898:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X3
translation: MAGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKESRPQMPVPSATPASASSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSVQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIESFSVPPDVTATTSTPSARPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISAAGTEPAYIEYKTSKEGSVMGVTVSRVAMLAHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHAHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTVAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGMMCIVKPDGPPQLCKTDEIGEICVSSRAGGMIYYGLAGVTKNTFEVIPVNSSGSPVGEVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAQATPDHPLFLLLNAKVPLVPVSVNAVSLLSIFWQGSGARRPELTPWKGTTVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYSGCVPVTVRPPHAQSLVATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAGAVDVKTWPTIIDTDDLPRKRPAQIYKPPTPEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLFLWLSTVSQYKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(541646..541898,542335..542458,543164..543341,543906..543980,544501..544558,544681..544742,545224..545394,546338..546506,547037..547167,547922..548031,548481..548592,549245..549366,549741..549864,550071..550166,550386..550466,550588..550697,551061..551262,553308..553422,554142..554269,554388..554468,554768..554904,555108..555247,555833..555947,556514..556633,557377..557470,557975..558039,559020..559122,559833..559942,560449..560572,561758..561868,562293..562384,562614..562811,563411..563530,563813..563956,566211..566423,568099..568224,568735..568872,573736..573807,584780..584786))
location: region:541646-584786:-1
so has part: feature:584780-584786:-1:exon
so has part: feature:573736-573807:-1:exon
so has part: feature:568735-568872:-1:exon
so has part: feature:568099-568224:-1:exon
so has part: feature:566211-566423:-1:exon
so has part: feature:563813-563956:-1:exon
so has part: feature:563411-563530:-1:exon
so has part: feature:562614-562811:-1:exon
so has part: feature:562293-562384:-1:exon
so has part: feature:561758-561868:-1:exon
so has part: feature:560449-560572:-1:exon
so has part: feature:559833-559942:-1:exon
so has part: feature:559020-559122:-1:exon
so has part: feature:557975-558039:-1:exon
so has part: feature:557377-557470:-1:exon
so has part: feature:556514-556633:-1:exon
so has part: feature:555833-555947:-1:exon
so has part: feature:555108-555247:-1:exon
so has part: feature:554768-554904:-1:exon
so has part: feature:554388-554468:-1:exon
so has part: feature:554142-554269:-1:exon
so has part: feature:553308-553422:-1:exon
so has part: feature:551061-551262:-1:exon
so has part: feature:550588-550697:-1:exon
so has part: feature:550386-550466:-1:exon
so has part: feature:550071-550166:-1:exon
so has part: feature:549741-549864:-1:exon
so has part: feature:549245-549366:-1:exon
so has part: feature:548481-548592:-1:exon
so has part: feature:547922-548031:-1:exon
so has part: feature:547037-547167:-1:exon
so has part: feature:546338-546506:-1:exon
so has part: feature:545224-545394:-1:exon
so has part: feature:544681-544742:-1:exon
so has part: feature:544501-544558:-1:exon
so has part: feature:543906-543980:-1:exon
so has part: feature:543164-543341:-1:exon
so has part: feature:542335-542458:-1:exon
so has part: feature:541646-541898:-1:exon

XP_048183708.1
type: Protein
SIO_000068: ncbiprotein

position:584786:-1
position: 584786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584780-584786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573736-573807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568735-568872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568099-568224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566211-566423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563813-563956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563411-563530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562614-562811:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:562293-562384:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561758-561868:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:560449-560572:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559833-559942:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559020-559122:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:557975-558039:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:557377-557470:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:556514-556633:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:555833-555947:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:555108-555247:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:554768-554904:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:554388-554468:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:554142-554269:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553308-553422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:551061-551262:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:550588-550697:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:550386-550466:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:550071-550166:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:549741-549864:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:549245-549366:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:548481-548592:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:547922-548031:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:547037-547167:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:546338-546506:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:545224-545394:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:544681-544742:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:544501-544558:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:543906-543980:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:543164-543341:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:542335-542458:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:541646-541898:-1:exon

LARP4
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(602827..624813)
location: region:602827-624813:-1
so has part: feature:602827-624813:-1:exon
subclass of: SO_0000010

125337596
type: Gene
SIO_000068: ncbigene

position:602827:-1
position: 602827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624813:-1
position: 624813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602827-624813:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327493.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(602827..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619546,624707..624813))
location: region:602827-624813:-1
so has part: feature:624707-624813:-1:exon
so has part: feature:619402-619546:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:602827-607916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624707-624813:-1:exon

position:624707:-1
position: 624707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619402-619546:-1:exon

position:619402:-1
position: 619402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619546:-1
position: 619546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:618139-618297:-1:exon

position:618139:-1
position: 618139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618297:-1
position: 618297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617728-617803:-1:exon

position:617728:-1
position: 617728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617803:-1
position: 617803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:617093-617229:-1:exon

position:617093:-1
position: 617093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617229:-1
position: 617229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:616750-616853:-1:exon

position:616750:-1
position: 616750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616853:-1
position: 616853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:615653-615763:-1:exon

position:615653:-1
position: 615653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615763:-1
position: 615763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:615226-615279:-1:exon

position:615226:-1
position: 615226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615279:-1
position: 615279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:614416-614625:-1:exon

position:614416:-1
position: 614416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614625:-1
position: 614625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:613830-613933:-1:exon

position:613830:-1
position: 613830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613933:-1
position: 613933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:610860-611084:-1:exon

position:610860:-1
position: 610860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611084:-1
position: 611084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:610122-610170:-1:exon

position:610122:-1
position: 610122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610170:-1
position: 610170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:609763-609921:-1:exon

position:609763:-1
position: 609763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609921:-1
position: 609921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:609092-609213:-1:exon

position:609092:-1
position: 609092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609213:-1
position: 609213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:608102-608270:-1:exon

position:608102:-1
position: 608102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608270:-1
position: 608270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:602827-607916:-1:exon

position:607916:-1
position: 607916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327492.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(602827..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619549,624707..624813))
location: region:602827-624813:-1
so has part: feature:624707-624813:-1:exon
so has part: feature:619402-619549:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:602827-607916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624707-624813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619402-619549:-1:exon

position:619549:-1
position: 619549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:602827-607916:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327490.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(602827..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619549,619750..619924,624707..624794))
location: region:602827-624794:-1
so has part: feature:624707-624794:-1:exon
so has part: feature:619750-619924:-1:exon
so has part: feature:619402-619549:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:602827-607916:-1:exon

position:624794:-1
position: 624794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624707-624794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619750-619924:-1:exon

position:619750:-1
position: 619750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619924:-1
position: 619924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:619402-619549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:602827-607916:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327494.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(602827..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619549,622733..622802))
location: region:602827-622802:-1
so has part: feature:622733-622802:-1:exon
so has part: feature:619402-619549:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:602827-607916:-1:exon

position:622802:-1
position: 622802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622733-622802:-1:exon

position:622733:-1
position: 622733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619402-619549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:602827-607916:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327491.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(602827..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619546,619750..619924,622733..622802))
location: region:602827-622802:-1
so has part: feature:622733-622802:-1:exon
so has part: feature:619750-619924:-1:exon
so has part: feature:619402-619546:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:602827-607916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622733-622802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619750-619924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619402-619546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:602827-607916:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327489.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(602827..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619549,619750..619924,622733..622802))
location: region:602827-622802:-1
so has part: feature:622733-622802:-1:exon
so has part: feature:619750-619924:-1:exon
so has part: feature:619402-619549:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:602827-607916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622733-622802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619750-619924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619402-619549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:602827-607916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X4
translation: MLLFVEVTSKGAGLNPNAKVWQEVPPGSGEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLSRTNSRNFVMERHNSSLTGHQDQGYSQKDSPTAQLEQNGDYGVGRGRRNVFRGRRRREDDRISRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLSPCPAPAPDEQTPSAAQPPVPSVSSPSQTEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCAVSAAKPPRTNASSPSAQASAAPALSAQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEENGTSEKAPEKAPHERAEGRMKDYSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRGGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(607578..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619546,624707..624724))
location: region:607578-624724:-1
so has part: feature:624707-624724:-1:exon
so has part: feature:619402-619546:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:607578-607916:-1:exon

XP_048183450.1
type: Protein
SIO_000068: ncbiprotein

position:607578:-1
position: 607578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624724:-1
position: 624724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624707-624724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619402-619546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:607578-607916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X3
translation: MLLFVEQVTSKGAGLNPNAKVWQEVPPGSGEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLSRTNSRNFVMERHNSSLTGHQDQGYSQKDSPTAQLEQNGDYGVGRGRRNVFRGRRRREDDRISRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLSPCPAPAPDEQTPSAAQPPVPSVSSPSQTEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCAVSAAKPPRTNASSPSAQASAAPALSAQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEENGTSEKAPEKAPHERAEGRMKDYSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRGGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(607578..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619549,624707..624724))
location: region:607578-624724:-1
so has part: feature:624707-624724:-1:exon
so has part: feature:619402-619549:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:607578-607916:-1:exon

XP_048183449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:624707-624724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619402-619549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:607578-607916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X2
translation: MLSDVNKERLKATLLMEVTSKGAGLNPNAKVWQEVPPGSGEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLSRTNSRNFVMERHNSSLTGHQDQGYSQKDSPTAQLEQNGDYGVGRGRRNVFRGRRRREDDRISRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLSPCPAPAPDEQTPSAAQPPVPSVSSPSQTEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCAVSAAKPPRTNASSPSAQASAAPALSAQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEENGTSEKAPEKAPHERAEGRMKDYSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRGGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(607578..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619546,619750..619800))
location: region:607578-619800:-1
so has part: feature:619750-619800:-1:exon
so has part: feature:619402-619546:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:607578-607916:-1:exon

XP_048183448.1
type: Protein
SIO_000068: ncbiprotein

position:619800:-1
position: 619800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619750-619800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619402-619546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:607578-607916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X1
translation: MLSDVNKERLKATLLMEQVTSKGAGLNPNAKVWQEVPPGSGEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLSRTNSRNFVMERHNSSLTGHQDQGYSQKDSPTAQLEQNGDYGVGRGRRNVFRGRRRREDDRISRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLSPCPAPAPDEQTPSAAQPPVPSVSSPSQTEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCAVSAAKPPRTNASSPSAQASAAPALSAQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEENGTSEKAPEKAPHERAEGRMKDYSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRGGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(607578..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619549,619750..619800))
location: region:607578-619800:-1
so has part: feature:619750-619800:-1:exon
so has part: feature:619402-619549:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:607578-607916:-1:exon

XP_048183446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619750-619800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619402-619549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:607578-607916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X1
translation: MLSDVNKERLKATLLMEQVTSKGAGLNPNAKVWQEVPPGSGEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLSRTNSRNFVMERHNSSLTGHQDQGYSQKDSPTAQLEQNGDYGVGRGRRNVFRGRRRREDDRISRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLSPCPAPAPDEQTPSAAQPPVPSVSSPSQTEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCAVSAAKPPRTNASSPSAQASAAPALSAQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEENGTSEKAPEKAPHERAEGRMKDYSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRGGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(607578..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619549,619750..619800))
location: region:607578-619800:-1
so has part: feature:619750-619800:-1:exon
so has part: feature:619402-619549:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:607578-607916:-1:exon

XP_048183447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:619750-619800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619402-619549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:607578-607916:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X5
translation: MYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNRVKPHFRSSSSSEHPEGPPGAGALPMGDLSRTNSRNFVMERHNSSLTGHQDQGYSQKDSPTAQLEQNGDYGVGRGRRNVFRGRRRREDDRISRPQPSAETKTQTPKFDLLASNFPPLPGSTAKILGEPVLESRMSDIVKGVCKEKESKDSLSPCPAPAPDEQTPSAAQPPVPSVSSPSQTEPVLLSTVQPESKPEEVSAPKDVASPASPPASVCAVSAAKPPRTNASSPSAQASAAPALSAQEPRKLSYAEVCQKPPKEPPPVPVQPLREHRTNIVPPAKNEENGTSEKAPEKAPHERAEGRMKDYSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRGGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(607578..607916,608102..608270,609092..609213,609763..609921,610122..610170,610860..611084,613830..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618253))
location: region:607578-618253:-1
so has part: feature:618139-618253:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613830-613933:-1:exon
so has part: feature:610860-611084:-1:exon
so has part: feature:610122-610170:-1:exon
so has part: feature:609763-609921:-1:exon
so has part: feature:609092-609213:-1:exon
so has part: feature:608102-608270:-1:exon
so has part: feature:607578-607916:-1:exon

XP_048183451.1
type: Protein
SIO_000068: ncbiprotein

position:618253:-1
position: 618253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618139-618253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:613830-613933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:610860-611084:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:610122-610170:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:609763-609921:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:609092-609213:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:608102-608270:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:607578-607916:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_048327495.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(613826..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619549,624707..624813))
location: region:613826-624813:-1
so has part: feature:624707-624813:-1:exon
so has part: feature:619402-619549:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613826-613933:-1:exon

position:613826:-1
position: 613826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624707-624813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619402-619549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613826-613933:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X6
translation: MLLFVEQVTSKGAGLNPNAKVWQEVPPGSGEAVPPTNGTEHTWQETAAAQGTPAEGNIEISEDSCKQYEVMYSPSCEATRNGTGVDEASANGIVLATEDLGYQIYEVSGDGSSTVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRSSPMVQVDERGEKVRPNHKRCIIILREIPETTPIEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPVMARIKAINTFFAKNGYRVVDSSVYPQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTNAASLSIGRPFHRNR
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(613826..613933,614416..614625,615226..615279,615653..615763,616750..616853,617093..617229,617728..617803,618139..618297,619402..619549,624707..624724))
location: region:613826-624724:-1
so has part: feature:624707-624724:-1:exon
so has part: feature:619402-619549:-1:exon
so has part: feature:618139-618297:-1:exon
so has part: feature:617728-617803:-1:exon
so has part: feature:617093-617229:-1:exon
so has part: feature:616750-616853:-1:exon
so has part: feature:615653-615763:-1:exon
so has part: feature:615226-615279:-1:exon
so has part: feature:614416-614625:-1:exon
so has part: feature:613826-613933:-1:exon

XP_048183452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:624707-624724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619402-619549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618139-618297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617728-617803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617093-617229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616750-616853:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615653-615763:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615226-615279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614416-614625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613826-613933:-1:exon

LIMA1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 633393..657245
location: region:633393-657245:1
so has part: feature:633393-657245:1:exon
subclass of: SO_0000010

125337595
type: Gene
SIO_000068: ncbigene

position:633393:1
position: 633393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657245:1
position: 657245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633393-657245:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327487.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(633393..633510,636865..636999,638964..639009,640985..641383,645582..645720,646751..646911,649197..649301,651227..651284,651563..651675,654555..654688,655065..657245)
location: region:633393-657245:1
so has part: feature:633393-633510:1:exon
so has part: feature:636865-636999:1:exon
so has part: feature:638964-639009:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645582-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:649197-649301:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-657245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633393-633510:1:exon

position:633510:1
position: 633510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:636865-636999:1:exon

position:636865:1
position: 636865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636999:1
position: 636999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638964-639009:1:exon

position:638964:1
position: 638964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639009:1
position: 639009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:640985-641383:1:exon

position:640985:1
position: 640985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641383:1
position: 641383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:645582-645720:1:exon

position:645582:1
position: 645582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645720:1
position: 645720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:646751-646911:1:exon

position:646751:1
position: 646751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646911:1
position: 646911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:649197-649301:1:exon

position:649197:1
position: 649197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649301:1
position: 649301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:651227-651284:1:exon

position:651227:1
position: 651227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651284:1
position: 651284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:651563-651675:1:exon

position:651563:1
position: 651563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651675:1
position: 651675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:654555-654688:1:exon

position:654555:1
position: 654555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654688:1
position: 654688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:655065-657245:1:exon

position:655065:1
position: 655065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327485.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(633393..633509,636862..636999,638964..639009,640985..641383,645582..645720,646751..646911,649197..649301,651227..651284,651563..651675,654555..654688,655065..657245)
location: region:633393-657245:1
so has part: feature:633393-633509:1:exon
so has part: feature:636862-636999:1:exon
so has part: feature:638964-639009:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645582-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:649197-649301:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-657245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633393-633509:1:exon

position:633509:1
position: 633509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:636862-636999:1:exon

position:636862:1
position: 636862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638964-639009:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:645582-645720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649197-649301:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655065-657245:1:exon

LOC125337673
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(635143..648632)
location: region:635143-648632:-1
so has part: feature:635143-648632:-1:exon
subclass of: SO_0000011

125337673
type: Gene
SIO_000068: ncbigene

position:635143:-1
position: 635143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648632:-1
position: 648632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635143-648632:-1:exon

LOC125337673
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125337673
product: uncharacterized LOC125337673
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007208111.1
SIO_010081: LOC125337673
subclass of: SO_0000673
so part of: LOC125337673
location: complement(join(635143..635392,637972..638112,648499..648632))
location: region:635143-648632:-1
so has part: feature:648499-648632:-1:exon
so has part: feature:637972-638112:-1:exon
so has part: feature:635143-635392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648499-648632:-1:exon

position:648499:-1
position: 648499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637972-638112:-1:exon

position:637972:-1
position: 637972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638112:-1
position: 638112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:635143-635392:-1:exon

position:635392:-1
position: 635392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327484.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(636865..636999,638964..639009,640985..641383,645582..645720,646751..646911,651227..651284,651563..651675,654555..654688,655065..657245)
location: region:636865-657245:1
so has part: feature:636865-636999:1:exon
so has part: feature:638964-639009:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645582-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-657245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636865-636999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638964-639009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645582-645720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655065-657245:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327482.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(636865..636999,638964..639009,640985..641383,645609..645720,646751..646911,649197..649301,651227..651284,651563..651675,654555..654688,655065..657245)
location: region:636865-657245:1
so has part: feature:636865-636999:1:exon
so has part: feature:638964-639009:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645609-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:649197-649301:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-657245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636865-636999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638964-639009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645609-645720:1:exon

position:645609:1
position: 645609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649197-649301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655065-657245:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327483.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(636865..636999,638964..639009,640985..641383,645612..645720,646751..646911,649197..649301,651227..651284,651563..651675,654555..654688,655065..657245)
location: region:636865-657245:1
so has part: feature:636865-636999:1:exon
so has part: feature:638964-639009:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645612-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:649197-649301:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-657245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636865-636999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638964-639009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645612-645720:1:exon

position:645612:1
position: 645612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649197-649301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655065-657245:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X4
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSKYQKAAEEAAAEKKRSNTENLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTSRTPSPPPGAGAASGQAQCPAADSTEPHIHSRESGSMENCVREPREMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQAKAADGRVCPQQGPREPRRAALGRRISENSLSSEDCDAAQGERSHSTAGYLVETSPGVSPDKAEARRNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGIIPMSEIQASESELKNYKSGQKENLAPIEDSNSCQDGEKVSVGENSLSLHSGLLEDGHVGQSESEAEAQKHVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKAECEESPEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTISVKGHKTENSLSPSKAERDTLKRSEELESEVVIEKKQKEKKVEHRNIQDAGEKNVEEERELSGVKTVEHNVVENGQVNADTDEEEHATEEPEIPKEELLEPNSPKHSSLANVVTAKESCPNQNRKSQDVGFWEGEDVEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(636881..636999,638964..639009,640985..641383,645582..645720,646751..646911,649197..649301,651227..651284,651563..651675,654555..654688,655065..656067)
location: region:636881-656067:1
so has part: feature:636881-636999:1:exon
so has part: feature:638964-639009:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645582-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:649197-649301:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-656067:1:exon

XP_048183442.1
type: Protein
SIO_000068: ncbiprotein

position:636881:1
position: 636881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656067:1
position: 656067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636881-636999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638964-639009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645582-645720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649197-649301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655065-656067:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X4
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSKYQKAAEEAAAEKKRSNTENLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTSRTPSPPPGAGAASGQAQCPAADSTEPHIHSRESGSMENCVREPREMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQAKAADGRVCPQQGPREPRRAALGRRISENSLSSEDCDAAQGERSHSTAGYLVETSPGVSPDKAEARRNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGIIPMSEIQASESELKNYKSGQKENLAPIEDSNSCQDGEKVSVGENSLSLHSGLLEDGHVGQSESEAEAQKHVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKAECEESPEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTISVKGHKTENSLSPSKAERDTLKRSEELESEVVIEKKQKEKKVEHRNIQDAGEKNVEEERELSGVKTVEHNVVENGQVNADTDEEEHATEEPEIPKEELLEPNSPKHSSLANVVTAKESCPNQNRKSQDVGFWEGEDVEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(636881..636999,638964..639009,640985..641383,645582..645720,646751..646911,649197..649301,651227..651284,651563..651675,654555..654688,655065..656067)
location: region:636881-656067:1
so has part: feature:636881-636999:1:exon
so has part: feature:638964-639009:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645582-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:649197-649301:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-656067:1:exon

XP_048183444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636881-636999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638964-639009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645582-645720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649197-649301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655065-656067:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X3
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSKYQKAAEEAAAEKKRSNTENLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTSRTPSPPPGAGAASGQAQCPAADSTEPHIHSRESGSMENCVREPREMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQAKAADGRVCPQQGPREPRRAALGRRISENSLSSEDCDAAQGERSHSTAGYLVETSPGVSPDKAEARRNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGIIPMVSVGENSLSLHSGLLEDGHVGQSESEAEAQKHVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKAECEESPEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTISVKGHKTENSLSPSKAERDTLKRSEELESEVVIEKKQKEKKVEHRNIQDAGEKNVEEERELSGVKTVEHNVVENGQVNADTDEEEHATEEPEIPKEELLEPNSPKHSSLANVVTAKESCPNQNRKSQDVGFWEGEDVEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(636881..636999,638964..639009,640985..641383,645582..645720,646751..646911,651227..651284,651563..651675,654555..654688,655065..656067)
location: region:636881-656067:1
so has part: feature:636881-636999:1:exon
so has part: feature:638964-639009:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645582-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-656067:1:exon

XP_048183441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636881-636999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638964-639009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645582-645720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655065-656067:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSKYQKAAEEAAAEKKRSNTENLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTSRTPSPPPGAGAASGQAQCPAADSTEPHIHSRESGSMENCVREPREMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQAKQGPREPRRAALGRRISENSLSSEDCDAAQGERSHSTAGYLVETSPGVSPDKAEARRNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGIIPMSEIQASESELKNYKSGQKENLAPIEDSNSCQDGEKVSVGENSLSLHSGLLEDGHVGQSESEAEAQKHVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKAECEESPEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTISVKGHKTENSLSPSKAERDTLKRSEELESEVVIEKKQKEKKVEHRNIQDAGEKNVEEERELSGVKTVEHNVVENGQVNADTDEEEHATEEPEIPKEELLEPNSPKHSSLANVVTAKESCPNQNRKSQDVGFWEGEDVEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(636881..636999,638964..639009,640985..641383,645609..645720,646751..646911,649197..649301,651227..651284,651563..651675,654555..654688,655065..656067)
location: region:636881-656067:1
so has part: feature:636881-636999:1:exon
so has part: feature:638964-639009:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645609-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:649197-649301:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-656067:1:exon

XP_048183439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636881-636999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638964-639009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645609-645720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649197-649301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655065-656067:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X2
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALAERFSKYQKAAEEAAAEKKRSNTENLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTSRTPSPPPGAGAASGQAQCPAADSTEPHIHSRESGSMENCVREPREMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQAKGPREPRRAALGRRISENSLSSEDCDAAQGERSHSTAGYLVETSPGVSPDKAEARRNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGIIPMSEIQASESELKNYKSGQKENLAPIEDSNSCQDGEKVSVGENSLSLHSGLLEDGHVGQSESEAEAQKHVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKAECEESPEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTISVKGHKTENSLSPSKAERDTLKRSEELESEVVIEKKQKEKKVEHRNIQDAGEKNVEEERELSGVKTVEHNVVENGQVNADTDEEEHATEEPEIPKEELLEPNSPKHSSLANVVTAKESCPNQNRKSQDVGFWEGEDVEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(636881..636999,638964..639009,640985..641383,645612..645720,646751..646911,649197..649301,651227..651284,651563..651675,654555..654688,655065..656067)
location: region:636881-656067:1
so has part: feature:636881-636999:1:exon
so has part: feature:638964-639009:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645612-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:649197-649301:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-656067:1:exon

XP_048183440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:636881-636999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638964-639009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645612-645720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649197-649301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655065-656067:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327488.1
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(640111..640184,640985..641383,645582..645720,646751..646911,649197..649301,651227..651284,651563..651675,654555..654688,655065..657245)
location: region:640111-657245:1
so has part: feature:640111-640184:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645582-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:649197-649301:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-657245:1:exon

position:640111:1
position: 640111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640111-640184:1:exon

position:640184:1
position: 640184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645582-645720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649197-649301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655065-657245:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X5
translation: MQWWQNTENLPAHFTRGNLSVLKKKWENPVLGAESGKETVRSSCAEVRHKVGTSRTPSPPPGAGAASGQAQCPAADSTEPHIHSRESGSMENCVREPREMEKPEASERSESPGRIEKYNVPLTKLKMMFEKGEAPQAKAADGRVCPQQGPREPRRAALGRRISENSLSSEDCDAAQGERSHSTAGYLVETSPGVSPDKAEARRNLDMPRLSETSIKDRLAKYQAAVSKQGSSSGIIPMSEIQASESELKNYKSGQKENLAPIEDSNSCQDGEKVSVGENSLSLHSGLLEDGHVGQSESEAEAQKHVSSKQQNLGAKAAGQTEASPPKAVKKFQLPMKETCVGCQKTVYPMERLFANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKSKGNYDEGFGHKQHKELWAGKAECEESPEKTVHGVNAPETPQSPGVEDAPIAKVGVLAASMEAKASAVPEREERPAETKKLRIAWPPPSDQSIQGSALDEGIKVLKPKWPPEEEISKPDVQEDVDLDLKKLRRSSSLKERSRPFTVAASFRTISVKGHKTENSLSPSKAERDTLKRSEELESEVVIEKKQKEKKVEHRNIQDAGEKNVEEERELSGVKTVEHNVVENGQVNADTDEEEHATEEPEIPKEELLEPNSPKHSSLANVVTAKESCPNQNRKSQDVGFWEGEDVEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(640170..640184,640985..641383,645582..645720,646751..646911,649197..649301,651227..651284,651563..651675,654555..654688,655065..656067)
location: region:640170-656067:1
so has part: feature:640170-640184:1:exon
so has part: feature:640985-641383:1:exon
so has part: feature:645582-645720:1:exon
so has part: feature:646751-646911:1:exon
so has part: feature:649197-649301:1:exon
so has part: feature:651227-651284:1:exon
so has part: feature:651563-651675:1:exon
so has part: feature:654555-654688:1:exon
so has part: feature:655065-656067:1:exon

XP_048183445.1
type: Protein
SIO_000068: ncbiprotein

position:640170:1
position: 640170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640170-640184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:640985-641383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645582-645720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:646751-646911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649197-649301:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651227-651284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651563-651675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:654555-654688:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655065-656067:1:exon

CERS5
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 659848..680197
location: region:659848-680197:1
so has part: feature:659848-680197:1:exon
subclass of: SO_0000010

125337632
type: Gene
SIO_000068: ncbigene

position:659848:1
position: 659848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680197:1
position: 680197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659848-680197:1:exon

CERS5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 134902
gene: CERS5
product: ceramide synthase 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XR_007208107.1
SIO_010081: CERS5
so part of: CERS5
location: join(659848..660091,666057..666162,668154..668284,670513..670570,671108..671158,671716..671808,673081..673209,673806..673912,676165..676321,677251..677348,678976..679044)
location: region:659848-679044:1
so has part: feature:659848-660091:1:exon
so has part: feature:666057-666162:1:exon
so has part: feature:668154-668284:1:exon
so has part: feature:670513-670570:1:exon
so has part: feature:671108-671158:1:exon
so has part: feature:671716-671808:1:exon
so has part: feature:673081-673209:1:exon
so has part: feature:673806-673912:1:exon
so has part: feature:676165-676321:1:exon
so has part: feature:677251-677348:1:exon
so has part: feature:678976-679044:1:exon

position:679044:1
position: 679044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659848-660091:1:exon

position:660091:1
position: 660091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666057-666162:1:exon

position:666057:1
position: 666057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666162:1
position: 666162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668154-668284:1:exon

position:668154:1
position: 668154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668284:1
position: 668284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:670513-670570:1:exon

position:670513:1
position: 670513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670570:1
position: 670570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:671108-671158:1:exon

position:671108:1
position: 671108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671158:1
position: 671158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:671716-671808:1:exon

position:671716:1
position: 671716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671808:1
position: 671808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:673081-673209:1:exon

position:673081:1
position: 673081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673209:1
position: 673209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:673806-673912:1:exon

position:673806:1
position: 673806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673912:1
position: 673912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:676165-676321:1:exon

position:676165:1
position: 676165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676321:1
position: 676321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:677251-677348:1:exon

position:677251:1
position: 677251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677348:1
position: 677348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:678976-679044:1:exon

position:678976:1
position: 678976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: CERS5
product: ceramide synthase 5, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327554.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(659849..660091,666057..666162,668154..668284,670513..670570,671108..671158,671716..671808,673081..673209,673806..673912,676165..676321,677319..677348,678976..680197)
location: region:659849-680197:1
so has part: feature:659849-660091:1:exon
so has part: feature:666057-666162:1:exon
so has part: feature:668154-668284:1:exon
so has part: feature:670513-670570:1:exon
so has part: feature:671108-671158:1:exon
so has part: feature:671716-671808:1:exon
so has part: feature:673081-673209:1:exon
so has part: feature:673806-673912:1:exon
so has part: feature:676165-676321:1:exon
so has part: feature:677319-677348:1:exon
so has part: feature:678976-680197:1:exon

position:659849:1
position: 659849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659849-660091:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666057-666162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668154-668284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670513-670570:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671108-671158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671716-671808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673081-673209:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673806-673912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676165-676321:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:677319-677348:1:exon

position:677319:1
position: 677319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:678976-680197:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: CERS5
product: ceramide synthase 5, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327556.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(659850..660091,666057..666162,668154..668284,670513..670570,671108..671158,671716..671808,673081..673209,673806..673912,676165..676321,678976..680197)
location: region:659850-680197:1
so has part: feature:659850-660091:1:exon
so has part: feature:666057-666162:1:exon
so has part: feature:668154-668284:1:exon
so has part: feature:670513-670570:1:exon
so has part: feature:671108-671158:1:exon
so has part: feature:671716-671808:1:exon
so has part: feature:673081-673209:1:exon
so has part: feature:673806-673912:1:exon
so has part: feature:676165-676321:1:exon
so has part: feature:678976-680197:1:exon

position:659850:1
position: 659850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659850-660091:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666057-666162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668154-668284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670513-670570:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671108-671158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671716-671808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673081-673209:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673806-673912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676165-676321:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678976-680197:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X1
translation: MAAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGSGLQYPRAAHVLSAFPLALGIFAVRLLFERFIAKPCAINLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYLSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVILQVLHIIWSYLIIRTASKALVRGKIGAGQFHPVHVSKDDRSDVESSSEEEDVTSNSTKGIFSTSSNGSNRLNGHVAGGQWTGEE
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(659892..660091,666057..666162,668154..668284,670513..670570,671108..671158,671716..671808,673081..673209,673806..673912,676165..676321,677319..677348,678976..679128)
location: region:659892-679128:1
so has part: feature:659892-660091:1:exon
so has part: feature:666057-666162:1:exon
so has part: feature:668154-668284:1:exon
so has part: feature:670513-670570:1:exon
so has part: feature:671108-671158:1:exon
so has part: feature:671716-671808:1:exon
so has part: feature:673081-673209:1:exon
so has part: feature:673806-673912:1:exon
so has part: feature:676165-676321:1:exon
so has part: feature:677319-677348:1:exon
so has part: feature:678976-679128:1:exon

XP_048183511.1
type: Protein
SIO_000068: ncbiprotein

position:659892:1
position: 659892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679128:1
position: 679128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659892-660091:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666057-666162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668154-668284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670513-670570:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671108-671158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671716-671808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673081-673209:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673806-673912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676165-676321:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:677319-677348:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:678976-679128:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X2
translation: MAAAAAAALRAWFWNERFWLPHNVTWADLAGEPGPPGSGLQYPRAAHVLSAFPLALGIFAVRLLFERFIAKPCAINLGIQDSGPHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTLTKFCESMWRFTFYLSIFFYGIRFLWTAPWFWDTRQCWYNYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVILQVLHIIWSYLIIRTASKALVRGKVSKDDRSDVESSSEEEDVTSNSTKGIFSTSSNGSNRLNGHVAGGQWTGEE
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(659892..660091,666057..666162,668154..668284,670513..670570,671108..671158,671716..671808,673081..673209,673806..673912,676165..676321,678976..679128)
location: region:659892-679128:1
so has part: feature:659892-660091:1:exon
so has part: feature:666057-666162:1:exon
so has part: feature:668154-668284:1:exon
so has part: feature:670513-670570:1:exon
so has part: feature:671108-671158:1:exon
so has part: feature:671716-671808:1:exon
so has part: feature:673081-673209:1:exon
so has part: feature:673806-673912:1:exon
so has part: feature:676165-676321:1:exon
so has part: feature:678976-679128:1:exon

XP_048183513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:659892-660091:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666057-666162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668154-668284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670513-670570:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671108-671158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671716-671808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673081-673209:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673806-673912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676165-676321:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678976-679128:1:exon

LOC125337670
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(680430..682542)
location: region:680430-682542:-1
so has part: feature:680430-682542:-1:exon
subclass of: SO_0000010

125337670
type: Gene
SIO_000068: ncbigene

position:680430:-1
position: 680430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682542:-1
position: 682542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680430-682542:-1:exon

LOC125337670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125337670
product: cytochrome c oxidase assembly protein COX14 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327616.1
SIO_010081: LOC125337670
subclass of: SO_0000673
so part of: LOC125337670
location: complement(join(680430..680738,682458..682542))
location: region:680430-682542:-1
so has part: feature:682458-682542:-1:exon
so has part: feature:680430-680738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:682458-682542:-1:exon

position:682458:-1
position: 682458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680430-680738:-1:exon

position:680738:-1
position: 680738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125337670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125337670
product: cytochrome c oxidase assembly protein COX14 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327617.1
SIO_010081: LOC125337670
subclass of: SO_0000673
so part of: LOC125337670
location: complement(join(680430..680738,681634..681784))
location: region:680430-681784:-1
so has part: feature:681634-681784:-1:exon
so has part: feature:680430-680738:-1:exon

position:681784:-1
position: 681784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681634-681784:-1:exon

position:681634:-1
position: 681634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680430-680738:-1:exon

LOC125337670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125337670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly protein COX14 homolog
translation: MVSRKQLADFGYKAFSGSMMLLTVYAGYLCSVRVQRILQRRRERENAPGPES
SIO_010081: LOC125337670
subclass of: SO_0000673
so part of: LOC125337670
location: complement(680572..680730)
location: region:680572-680730:-1
so has part: feature:680572-680730:-1:exon

XP_048183573.1
type: Protein
SIO_000068: ncbiprotein

position:680572:-1
position: 680572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680730:-1
position: 680730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680572-680730:-1:exon

LOC125337670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125337670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly protein COX14 homolog
translation: MVSRKQLADFGYKAFSGSMMLLTVYAGYLCSVRVQRILQRRRERENAPGPES
SIO_010081: LOC125337670
subclass of: SO_0000673
so part of: LOC125337670
location: complement(680572..680730)
location: region:680572-680730:-1
so has part: feature:680572-680730:-1:exon

XP_048183574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:680572-680730:-1:exon

GPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(684275..689458)
location: region:684275-689458:-1
so has part: feature:684275-689458:-1:exon
subclass of: SO_0000010

125337642
type: Gene
SIO_000068: ncbigene

position:684275:-1
position: 684275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689458:-1
position: 689458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684275-689458:-1:exon

GPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: GPD1
product: glycerol-3-phosphate dehydrogenase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327569.1
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: complement(join(684275..685743,685977..686083,686470..686703,686894..687006,687915..688053,688459..688599,688991..689168,689349..689458))
location: region:684275-689458:-1
so has part: feature:689349-689458:-1:exon
so has part: feature:688991-689168:-1:exon
so has part: feature:688459-688599:-1:exon
so has part: feature:687915-688053:-1:exon
so has part: feature:686894-687006:-1:exon
so has part: feature:686470-686703:-1:exon
so has part: feature:685977-686083:-1:exon
so has part: feature:684275-685743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689349-689458:-1:exon

position:689349:-1
position: 689349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688991-689168:-1:exon

position:688991:-1
position: 688991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689168:-1
position: 689168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:688459-688599:-1:exon

position:688459:-1
position: 688459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688599:-1
position: 688599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687915-688053:-1:exon

position:687915:-1
position: 687915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688053:-1
position: 688053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:686894-687006:-1:exon

position:686894:-1
position: 686894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687006:-1
position: 687006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:686470-686703:-1:exon

position:686470:-1
position: 686470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686703:-1
position: 686703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:685977-686083:-1:exon

position:685977:-1
position: 685977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686083:-1
position: 686083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:684275-685743:-1:exon

position:685743:-1
position: 685743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic
translation: MGGKKVCIVGSGNWGSAIAKIAGSNAARLSSFESQVNMWVLEEEVGGRRLTDIINTEHENVKYLPGHKLPPNVVAEPDLLKACAGADVLLFVVPHQFIGQVCDQLKGHVKKEAVGVSLIKGVDEGPDGLRLISDIIHEKLGIEMNVLMGANIASEVAEEKFCETTIGCKNMKHGQMLKDLMQTPNFRVSVVQEADAVEICGALKNVVAVGAGFCDGLGYGDNTKAAVIRLGLMEMIGFAKLFCKGPVTPSTFLESCGVADLITTCYGGRNRKVAEAFAKTGKSIEQLEKEMLNGQKLQGPQTSAELHRILKSKNVVEKFPLLTAVYRICYEGKPVTDFITCLQNHPEHM
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: complement(join(685647..685743,685977..686083,686470..686703,686894..687006,687915..688053,688459..688599,688991..689168,689349..689389))
location: region:685647-689389:-1
so has part: feature:689349-689389:-1:exon
so has part: feature:688991-689168:-1:exon
so has part: feature:688459-688599:-1:exon
so has part: feature:687915-688053:-1:exon
so has part: feature:686894-687006:-1:exon
so has part: feature:686470-686703:-1:exon
so has part: feature:685977-686083:-1:exon
so has part: feature:685647-685743:-1:exon

XP_048183526.1
type: Protein
SIO_000068: ncbiprotein

position:685647:-1
position: 685647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689389:-1
position: 689389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689349-689389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688991-689168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:688459-688599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687915-688053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:686894-687006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686470-686703:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:685977-686083:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685647-685743:-1:exon

SMARCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(690575..697393)
location: region:690575-697393:-1
so has part: feature:690575-697393:-1:exon
subclass of: SO_0000010

125337608
type: Gene
SIO_000068: ncbigene

position:690575:-1
position: 690575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697393:-1
position: 697393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690575-697393:-1:exon

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327523.1
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(690575..692231,692424..692525,692758..692880,693204..693339,693762..693859,693972..694133,694427..694528,694849..694965,695450..695572,695856..695978,696073..696115,696967..697154,697229..697393))
location: region:690575-697393:-1
so has part: feature:697229-697393:-1:exon
so has part: feature:696967-697154:-1:exon
so has part: feature:696073-696115:-1:exon
so has part: feature:695856-695978:-1:exon
so has part: feature:695450-695572:-1:exon
so has part: feature:694849-694965:-1:exon
so has part: feature:694427-694528:-1:exon
so has part: feature:693972-694133:-1:exon
so has part: feature:693762-693859:-1:exon
so has part: feature:693204-693339:-1:exon
so has part: feature:692758-692880:-1:exon
so has part: feature:692424-692525:-1:exon
so has part: feature:690575-692231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697229-697393:-1:exon

position:697229:-1
position: 697229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696967-697154:-1:exon

position:696967:-1
position: 696967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697154:-1
position: 697154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:696073-696115:-1:exon

position:696073:-1
position: 696073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696115:-1
position: 696115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:695856-695978:-1:exon

position:695856:-1
position: 695856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695978:-1
position: 695978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:695450-695572:-1:exon

position:695450:-1
position: 695450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695572:-1
position: 695572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:694849-694965:-1:exon

position:694849:-1
position: 694849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694965:-1
position: 694965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:694427-694528:-1:exon

position:694427:-1
position: 694427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694528:-1
position: 694528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:693972-694133:-1:exon

position:693972:-1
position: 693972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694133:-1
position: 694133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:693762-693859:-1:exon

position:693762:-1
position: 693762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693859:-1
position: 693859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:693204-693339:-1:exon

position:693204:-1
position: 693204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693339:-1
position: 693339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:692758-692880:-1:exon

position:692758:-1
position: 692758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692880:-1
position: 692880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:692424-692525:-1:exon

position:692424:-1
position: 692424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692525:-1
position: 692525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:690575-692231:-1:exon

position:692231:-1
position: 692231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
translation: MAARAGFQSGPASGGGAGAAPGAALGPGAPGGAVRMGPAPGQGLYRSPLPGAAYPRPGMLPGGRLAPQGPAMGPPGYGGSPAVRPALAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(692178..692231,692424..692525,692758..692880,693204..693339,693762..693859,693972..694133,694427..694528,694849..694965,695450..695572,695856..695978,696073..696115,696967..697154,697229..697393))
location: region:692178-697393:-1
so has part: feature:697229-697393:-1:exon
so has part: feature:696967-697154:-1:exon
so has part: feature:696073-696115:-1:exon
so has part: feature:695856-695978:-1:exon
so has part: feature:695450-695572:-1:exon
so has part: feature:694849-694965:-1:exon
so has part: feature:694427-694528:-1:exon
so has part: feature:693972-694133:-1:exon
so has part: feature:693762-693859:-1:exon
so has part: feature:693204-693339:-1:exon
so has part: feature:692758-692880:-1:exon
so has part: feature:692424-692525:-1:exon
so has part: feature:692178-692231:-1:exon

XP_048183480.1
type: Protein
SIO_000068: ncbiprotein

position:692178:-1
position: 692178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697229-697393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696967-697154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:696073-696115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:695856-695978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:695450-695572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:694849-694965:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:694427-694528:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:693972-694133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:693762-693859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:693204-693339:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:692758-692880:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:692424-692525:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:692178-692231:-1:exon

ASIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(700008..719399)
location: region:700008-719399:-1
so has part: feature:700008-719399:-1:exon
subclass of: SO_0000010

125337604
type: Gene
SIO_000068: ncbigene

position:700008:-1
position: 700008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719399:-1
position: 719399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700008-719399:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327517.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(700008..701984,702176..702280,702374..702453,702713..702804,702890..703043,703124..703180,703261..703411,703611..703738,704205..704355,716834..717029,717917..718311,718737..718794,718947..719399))
location: region:700008-719399:-1
so has part: feature:718947-719399:-1:exon
so has part: feature:718737-718794:-1:exon
so has part: feature:717917-718311:-1:exon
so has part: feature:716834-717029:-1:exon
so has part: feature:704205-704355:-1:exon
so has part: feature:703611-703738:-1:exon
so has part: feature:703261-703411:-1:exon
so has part: feature:703124-703180:-1:exon
so has part: feature:702890-703043:-1:exon
so has part: feature:702713-702804:-1:exon
so has part: feature:702374-702453:-1:exon
so has part: feature:702176-702280:-1:exon
so has part: feature:700008-701984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718947-719399:-1:exon

position:718947:-1
position: 718947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:718737-718794:-1:exon

position:718737:-1
position: 718737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718794:-1
position: 718794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717917-718311:-1:exon

position:717917:-1
position: 717917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718311:-1
position: 718311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:716834-717029:-1:exon

position:716834:-1
position: 716834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717029:-1
position: 717029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:704205-704355:-1:exon

position:704205:-1
position: 704205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704355:-1
position: 704355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:703611-703738:-1:exon

position:703611:-1
position: 703611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703738:-1
position: 703738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:703261-703411:-1:exon

position:703261:-1
position: 703261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703411:-1
position: 703411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:703124-703180:-1:exon

position:703124:-1
position: 703124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703180:-1
position: 703180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:702890-703043:-1:exon

position:702890:-1
position: 702890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703043:-1
position: 703043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:702713-702804:-1:exon

position:702713:-1
position: 702713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702804:-1
position: 702804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:702374-702453:-1:exon

position:702374:-1
position: 702374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702453:-1
position: 702453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:702176-702280:-1:exon

position:702176:-1
position: 702176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702280:-1
position: 702280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:700008-701984:-1:exon

position:701984:-1
position: 701984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327516.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(700008..701984,702176..702280,702374..702453,702713..702804,702890..703043,703124..703180,703261..703411,703611..703738,704205..704355,716834..717029,717917..718311,718737..718831,718947..719399))
location: region:700008-719399:-1
so has part: feature:718947-719399:-1:exon
so has part: feature:718737-718831:-1:exon
so has part: feature:717917-718311:-1:exon
so has part: feature:716834-717029:-1:exon
so has part: feature:704205-704355:-1:exon
so has part: feature:703611-703738:-1:exon
so has part: feature:703261-703411:-1:exon
so has part: feature:703124-703180:-1:exon
so has part: feature:702890-703043:-1:exon
so has part: feature:702713-702804:-1:exon
so has part: feature:702374-702453:-1:exon
so has part: feature:702176-702280:-1:exon
so has part: feature:700008-701984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718947-719399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718737-718831:-1:exon

position:718831:-1
position: 718831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717917-718311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716834-717029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:704205-704355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703611-703738:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703261-703411:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703124-703180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702890-703043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702713-702804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:702374-702453:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:702176-702280:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:700008-701984:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327515.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(700008..701984,702176..702280,702374..702453,702713..702804,702890..703043,703124..703180,703261..703411,703611..703738,704205..704355,716834..717029,717917..718311,718737..719399))
location: region:700008-719399:-1
so has part: feature:718737-719399:-1:exon
so has part: feature:717917-718311:-1:exon
so has part: feature:716834-717029:-1:exon
so has part: feature:704205-704355:-1:exon
so has part: feature:703611-703738:-1:exon
so has part: feature:703261-703411:-1:exon
so has part: feature:703124-703180:-1:exon
so has part: feature:702890-703043:-1:exon
so has part: feature:702713-702804:-1:exon
so has part: feature:702374-702453:-1:exon
so has part: feature:702176-702280:-1:exon
so has part: feature:700008-701984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:718737-719399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717917-718311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:716834-717029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704205-704355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703611-703738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703261-703411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703124-703180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702890-703043:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702713-702804:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702374-702453:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:702176-702280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:700008-701984:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327513.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(700008..701984,702176..702280,702374..702453,702713..702804,702890..703043,703124..703180,703261..703411,703611..703738,704205..704355,705058..705888))
location: region:700008-705888:-1
so has part: feature:705058-705888:-1:exon
so has part: feature:704205-704355:-1:exon
so has part: feature:703611-703738:-1:exon
so has part: feature:703261-703411:-1:exon
so has part: feature:703124-703180:-1:exon
so has part: feature:702890-703043:-1:exon
so has part: feature:702713-702804:-1:exon
so has part: feature:702374-702453:-1:exon
so has part: feature:702176-702280:-1:exon
so has part: feature:700008-701984:-1:exon

position:705888:-1
position: 705888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705058-705888:-1:exon

position:705058:-1
position: 705058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:704205-704355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703611-703738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703261-703411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703124-703180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:702890-703043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702713-702804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702374-702453:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702176-702280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:700008-701984:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X2
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGLSHIFSYERLSLKRVVWALCFLGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCTPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRSNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(701880..701984,702176..702280,702374..702453,702713..702804,702890..703043,703124..703180,703261..703411,703611..703738,704205..704355,716834..717029,717917..718281))
location: region:701880-718281:-1
so has part: feature:717917-718281:-1:exon
so has part: feature:716834-717029:-1:exon
so has part: feature:704205-704355:-1:exon
so has part: feature:703611-703738:-1:exon
so has part: feature:703261-703411:-1:exon
so has part: feature:703124-703180:-1:exon
so has part: feature:702890-703043:-1:exon
so has part: feature:702713-702804:-1:exon
so has part: feature:702374-702453:-1:exon
so has part: feature:702176-702280:-1:exon
so has part: feature:701880-701984:-1:exon

XP_048183472.1
type: Protein
SIO_000068: ncbiprotein

position:701880:-1
position: 701880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718281:-1
position: 718281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717917-718281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:716834-717029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704205-704355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703611-703738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703261-703411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703124-703180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702890-703043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702713-702804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702374-702453:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702176-702280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:701880-701984:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X2
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGLSHIFSYERLSLKRVVWALCFLGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCTPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRSNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(701880..701984,702176..702280,702374..702453,702713..702804,702890..703043,703124..703180,703261..703411,703611..703738,704205..704355,716834..717029,717917..718281))
location: region:701880-718281:-1
so has part: feature:717917-718281:-1:exon
so has part: feature:716834-717029:-1:exon
so has part: feature:704205-704355:-1:exon
so has part: feature:703611-703738:-1:exon
so has part: feature:703261-703411:-1:exon
so has part: feature:703124-703180:-1:exon
so has part: feature:702890-703043:-1:exon
so has part: feature:702713-702804:-1:exon
so has part: feature:702374-702453:-1:exon
so has part: feature:702176-702280:-1:exon
so has part: feature:701880-701984:-1:exon

XP_048183473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717917-718281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:716834-717029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704205-704355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703611-703738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703261-703411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703124-703180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702890-703043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702713-702804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702374-702453:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702176-702280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:701880-701984:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X2
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGLSHIFSYERLSLKRVVWALCFLGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCTPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRSNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(701880..701984,702176..702280,702374..702453,702713..702804,702890..703043,703124..703180,703261..703411,703611..703738,704205..704355,716834..717029,717917..718281))
location: region:701880-718281:-1
so has part: feature:717917-718281:-1:exon
so has part: feature:716834-717029:-1:exon
so has part: feature:704205-704355:-1:exon
so has part: feature:703611-703738:-1:exon
so has part: feature:703261-703411:-1:exon
so has part: feature:703124-703180:-1:exon
so has part: feature:702890-703043:-1:exon
so has part: feature:702713-702804:-1:exon
so has part: feature:702374-702453:-1:exon
so has part: feature:702176-702280:-1:exon
so has part: feature:701880-701984:-1:exon

XP_048183474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717917-718281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:716834-717029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704205-704355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703611-703738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703261-703411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703124-703180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702890-703043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702713-702804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702374-702453:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:702176-702280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:701880-701984:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X1
translation: MPLQIFCTISFSSEEGPEDAAATGKGEDGADEFLYGQDEDEEDEEDTGATTDFVAFASSCTLHGLSHIFVEGSLGARQALWALAFLLSLSVFLYQVADRIAYYLEYHHVTLLSEEDSPEMTFPAVTFCNINRVRLSQLSHEDLLYLAPLVDYEPGMELGFTPAQPGPWEEDEPLNLYGFFNRTCHQLEDMLLSCSYRGQRCGPRDFAPVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKAVAGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCICEMPCNMTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRSNTDKGVALSMDDVKRHNPCESIRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(701880..701984,702176..702280,702374..702453,702713..702804,702890..703043,703124..703180,703261..703411,703611..703738,704205..704355,705058..705681))
location: region:701880-705681:-1
so has part: feature:705058-705681:-1:exon
so has part: feature:704205-704355:-1:exon
so has part: feature:703611-703738:-1:exon
so has part: feature:703261-703411:-1:exon
so has part: feature:703124-703180:-1:exon
so has part: feature:702890-703043:-1:exon
so has part: feature:702713-702804:-1:exon
so has part: feature:702374-702453:-1:exon
so has part: feature:702176-702280:-1:exon
so has part: feature:701880-701984:-1:exon

XP_048183470.1
type: Protein
SIO_000068: ncbiprotein

position:705681:-1
position: 705681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705058-705681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704205-704355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703611-703738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:703261-703411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703124-703180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:702890-703043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702713-702804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:702374-702453:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702176-702280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:701880-701984:-1:exon

LOC125337674
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 719282..723214
location: region:719282-723214:1
so has part: feature:719282-723214:1:exon
subclass of: SO_0000011

125337674
type: Gene
SIO_000068: ncbigene

position:719282:1
position: 719282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723214:1
position: 723214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719282-723214:1:exon

LOC125337674
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 134902
nc RNA class: lncRNA
gene: LOC125337674
product: uncharacterized LOC125337674
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007208112.1
SIO_010081: LOC125337674
subclass of: SO_0000673
so part of: LOC125337674
location: join(719282..719382,720688..723214)
location: region:719282-723214:1
so has part: feature:719282-719382:1:exon
so has part: feature:720688-723214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719282-719382:1:exon

position:719382:1
position: 719382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720688-723214:1:exon

position:720688:1
position: 720688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RACGAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 729593..740828
location: region:729593-740828:1
so has part: feature:729593-740828:1:exon
subclass of: SO_0000010

125337601
type: Gene
SIO_000068: ncbigene

position:729593:1
position: 729593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740828:1
position: 740828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729593-740828:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_048327504.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(729593..729733,733812..733900,734473..734675,735017..735153,735354..735423,735636..735689,736413..736490,736608..736725,736891..737021,737466..737630,738020..738115,738310..738508,738769..738874,739134..739266,739352..739487,739715..739823,740127..740828)
location: region:729593-740828:1
so has part: feature:729593-729733:1:exon
so has part: feature:733812-733900:1:exon
so has part: feature:734473-734675:1:exon
so has part: feature:735017-735153:1:exon
so has part: feature:735354-735423:1:exon
so has part: feature:735636-735689:1:exon
so has part: feature:736413-736490:1:exon
so has part: feature:736608-736725:1:exon
so has part: feature:736891-737021:1:exon
so has part: feature:737466-737630:1:exon
so has part: feature:738020-738115:1:exon
so has part: feature:738310-738508:1:exon
so has part: feature:738769-738874:1:exon
so has part: feature:739134-739266:1:exon
so has part: feature:739352-739487:1:exon
so has part: feature:739715-739823:1:exon
so has part: feature:740127-740828:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729593-729733:1:exon

position:729733:1
position: 729733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:733812-733900:1:exon

position:733812:1
position: 733812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733900:1
position: 733900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734473-734675:1:exon

position:734473:1
position: 734473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734675:1
position: 734675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:735017-735153:1:exon

position:735017:1
position: 735017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735153:1
position: 735153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:735354-735423:1:exon

position:735354:1
position: 735354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735423:1
position: 735423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:735636-735689:1:exon

position:735636:1
position: 735636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735689:1
position: 735689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:736413-736490:1:exon

position:736413:1
position: 736413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736490:1
position: 736490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:736608-736725:1:exon

position:736608:1
position: 736608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736725:1
position: 736725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:736891-737021:1:exon

position:736891:1
position: 736891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737021:1
position: 737021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:737466-737630:1:exon

position:737466:1
position: 737466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737630:1
position: 737630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:738020-738115:1:exon

position:738020:1
position: 738020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738115:1
position: 738115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:738310-738508:1:exon

position:738310:1
position: 738310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738508:1
position: 738508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:738769-738874:1:exon

position:738769:1
position: 738769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738874:1
position: 738874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:739134-739266:1:exon

position:739134:1
position: 739134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739266:1
position: 739266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:739352-739487:1:exon

position:739352:1
position: 739352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739487:1
position: 739487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:739715-739823:1:exon

position:739715:1
position: 739715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739823:1
position: 739823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:740127-740828:1:exon

position:740127:1
position: 740127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_048327502.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(732599..732644,733812..733900,734473..734675,735017..735153,735354..735423,735636..735689,736413..736490,736608..736725,736891..737021,737466..737630,738020..738115,738310..738508,738769..738874,739134..739266,739352..739487,739715..739823,740127..740828)
location: region:732599-740828:1
so has part: feature:732599-732644:1:exon
so has part: feature:733812-733900:1:exon
so has part: feature:734473-734675:1:exon
so has part: feature:735017-735153:1:exon
so has part: feature:735354-735423:1:exon
so has part: feature:735636-735689:1:exon
so has part: feature:736413-736490:1:exon
so has part: feature:736608-736725:1:exon
so has part: feature:736891-737021:1:exon
so has part: feature:737466-737630:1:exon
so has part: feature:738020-738115:1:exon
so has part: feature:738310-738508:1:exon
so has part: feature:738769-738874:1:exon
so has part: feature:739134-739266:1:exon
so has part: feature:739352-739487:1:exon
so has part: feature:739715-739823:1:exon
so has part: feature:740127-740828:1:exon

position:732599:1
position: 732599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:732599-732644:1:exon

position:732644:1
position: 732644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:733812-733900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:734473-734675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735017-735153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735354-735423:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735636-735689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736413-736490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736608-736725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:736891-737021:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737466-737630:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:738020-738115:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738310-738508:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738769-738874:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:739134-739266:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:739352-739487:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:739715-739823:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:740127-740828:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_048327503.1
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(732686..732745,733812..733900,734473..734675,735017..735153,735354..735423,735636..735689,736413..736490,736608..736725,736891..737021,737466..737630,738020..738115,738310..738508,738769..738874,739134..739266,739352..739487,739715..739823,740127..740828)
location: region:732686-740828:1
so has part: feature:732686-732745:1:exon
so has part: feature:733812-733900:1:exon
so has part: feature:734473-734675:1:exon
so has part: feature:735017-735153:1:exon
so has part: feature:735354-735423:1:exon
so has part: feature:735636-735689:1:exon
so has part: feature:736413-736490:1:exon
so has part: feature:736608-736725:1:exon
so has part: feature:736891-737021:1:exon
so has part: feature:737466-737630:1:exon
so has part: feature:738020-738115:1:exon
so has part: feature:738310-738508:1:exon
so has part: feature:738769-738874:1:exon
so has part: feature:739134-739266:1:exon
so has part: feature:739352-739487:1:exon
so has part: feature:739715-739823:1:exon
so has part: feature:740127-740828:1:exon

position:732686:1
position: 732686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:732686-732745:1:exon

position:732745:1
position: 732745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:733812-733900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:734473-734675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735017-735153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735354-735423:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735636-735689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736413-736490:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736608-736725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:736891-737021:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:737466-737630:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:738020-738115:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738310-738508:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:738769-738874:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:739134-739266:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:739352-739487:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:739715-739823:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:740127-740828:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1
translation: METAMVNLRGLYEQLTRQAELLSEGNECQFIQLAKNFEEYRRKWQKTEQELGRYKDLLMKTEAERSALDVKLKHARNQVDVEIKRRQKAEVDCEKLERQIQLIRELLMCDASGSIQLSEEQKSVLAFLNRPQASVGGSGNKRLSTIDESGSILSDISFDKTDDSLDWDSSVVKAVRLKRREKRRSSRQFAEGPPGPQKKSRSISNTADQANESIVAKTTLMVPNDGGPIEAISTIQTVPYPRRSRRKSGPLQPWNSESSIGSKQLESKMDSDGSSTPQHNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVTHPECRERCPLPCIPTLTGTPVRIGEGTLMDFVPSTPPMIPSIIVHCVNEIEQRGLHETGLYRISGCDKTVRELKEKFLRAKNVPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKTFMEAAEISDEDNSIAAMYQAVGELPQANRDTLAFLMVHLQRVAQSPDTKMDISNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVMERLLLLPMDYWSQLMMVEQENIDPAHVIENTNAYSTPRTPEVQVSILGPLTTPEQQLSKTPSSSSLSQRVRSTFSKTTPKFGSKSKSTTHLGHQGNFFASPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(733816..733900,734473..734675,735017..735153,735354..735423,735636..735689,736413..736490,736608..736725,736891..737021,737466..737630,738020..738115,738310..738508,738769..738874,739134..739266,739352..739487,739715..739823,740127..740202)
location: region:733816-740202:1
so has part: feature:733816-733900:1:exon
so has part: feature:734473-734675:1:exon
so has part: feature:735017-735153:1:exon
so has part: feature:735354-735423:1:exon
so has part: feature:735636-735689:1:exon
so has part: feature:736413-736490:1:exon
so has part: feature:736608-736725:1:exon
so has part: feature:736891-737021:1:exon
so has part: feature:737466-737630:1:exon
so has part: feature:738020-738115:1:exon
so has part: feature:738310-738508:1:exon
so has part: feature:738769-738874:1:exon
so has part: feature:739134-739266:1:exon
so has part: feature:739352-739487:1:exon
so has part: feature:739715-739823:1:exon
so has part: feature:740127-740202:1:exon

XP_048183459.1
type: Protein
SIO_000068: ncbiprotein

position:733816:1
position: 733816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740202:1
position: 740202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733816-733900:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:734473-734675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735017-735153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735354-735423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735636-735689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736413-736490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736608-736725:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736891-737021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737466-737630:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:738020-738115:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:738310-738508:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738769-738874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:739134-739266:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:739352-739487:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:739715-739823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:740127-740202:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1
translation: METAMVNLRGLYEQLTRQAELLSEGNECQFIQLAKNFEEYRRKWQKTEQELGRYKDLLMKTEAERSALDVKLKHARNQVDVEIKRRQKAEVDCEKLERQIQLIRELLMCDASGSIQLSEEQKSVLAFLNRPQASVGGSGNKRLSTIDESGSILSDISFDKTDDSLDWDSSVVKAVRLKRREKRRSSRQFAEGPPGPQKKSRSISNTADQANESIVAKTTLMVPNDGGPIEAISTIQTVPYPRRSRRKSGPLQPWNSESSIGSKQLESKMDSDGSSTPQHNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVTHPECRERCPLPCIPTLTGTPVRIGEGTLMDFVPSTPPMIPSIIVHCVNEIEQRGLHETGLYRISGCDKTVRELKEKFLRAKNVPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKTFMEAAEISDEDNSIAAMYQAVGELPQANRDTLAFLMVHLQRVAQSPDTKMDISNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVMERLLLLPMDYWSQLMMVEQENIDPAHVIENTNAYSTPRTPEVQVSILGPLTTPEQQLSKTPSSSSLSQRVRSTFSKTTPKFGSKSKSTTHLGHQGNFFASPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(733816..733900,734473..734675,735017..735153,735354..735423,735636..735689,736413..736490,736608..736725,736891..737021,737466..737630,738020..738115,738310..738508,738769..738874,739134..739266,739352..739487,739715..739823,740127..740202)
location: region:733816-740202:1
so has part: feature:733816-733900:1:exon
so has part: feature:734473-734675:1:exon
so has part: feature:735017-735153:1:exon
so has part: feature:735354-735423:1:exon
so has part: feature:735636-735689:1:exon
so has part: feature:736413-736490:1:exon
so has part: feature:736608-736725:1:exon
so has part: feature:736891-737021:1:exon
so has part: feature:737466-737630:1:exon
so has part: feature:738020-738115:1:exon
so has part: feature:738310-738508:1:exon
so has part: feature:738769-738874:1:exon
so has part: feature:739134-739266:1:exon
so has part: feature:739352-739487:1:exon
so has part: feature:739715-739823:1:exon
so has part: feature:740127-740202:1:exon

XP_048183460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:733816-733900:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:734473-734675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735017-735153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735354-735423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735636-735689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736413-736490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736608-736725:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736891-737021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737466-737630:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:738020-738115:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:738310-738508:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738769-738874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:739134-739266:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:739352-739487:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:739715-739823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:740127-740202:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1
translation: METAMVNLRGLYEQLTRQAELLSEGNECQFIQLAKNFEEYRRKWQKTEQELGRYKDLLMKTEAERSALDVKLKHARNQVDVEIKRRQKAEVDCEKLERQIQLIRELLMCDASGSIQLSEEQKSVLAFLNRPQASVGGSGNKRLSTIDESGSILSDISFDKTDDSLDWDSSVVKAVRLKRREKRRSSRQFAEGPPGPQKKSRSISNTADQANESIVAKTTLMVPNDGGPIEAISTIQTVPYPRRSRRKSGPLQPWNSESSIGSKQLESKMDSDGSSTPQHNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCRVVTHPECRERCPLPCIPTLTGTPVRIGEGTLMDFVPSTPPMIPSIIVHCVNEIEQRGLHETGLYRISGCDKTVRELKEKFLRAKNVPLLSKVDDIHAICGLLKDFLRSLKEPLLTFRLNKTFMEAAEISDEDNSIAAMYQAVGELPQANRDTLAFLMVHLQRVAQSPDTKMDISNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVMERLLLLPMDYWSQLMMVEQENIDPAHVIENTNAYSTPRTPEVQVSILGPLTTPEQQLSKTPSSSSLSQRVRSTFSKTTPKFGSKSKSTTHLGHQGNFFASPMLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(733816..733900,734473..734675,735017..735153,735354..735423,735636..735689,736413..736490,736608..736725,736891..737021,737466..737630,738020..738115,738310..738508,738769..738874,739134..739266,739352..739487,739715..739823,740127..740202)
location: region:733816-740202:1
so has part: feature:733816-733900:1:exon
so has part: feature:734473-734675:1:exon
so has part: feature:735017-735153:1:exon
so has part: feature:735354-735423:1:exon
so has part: feature:735636-735689:1:exon
so has part: feature:736413-736490:1:exon
so has part: feature:736608-736725:1:exon
so has part: feature:736891-737021:1:exon
so has part: feature:737466-737630:1:exon
so has part: feature:738020-738115:1:exon
so has part: feature:738310-738508:1:exon
so has part: feature:738769-738874:1:exon
so has part: feature:739134-739266:1:exon
so has part: feature:739352-739487:1:exon
so has part: feature:739715-739823:1:exon
so has part: feature:740127-740202:1:exon

XP_048183461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:733816-733900:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:734473-734675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735017-735153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735354-735423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735636-735689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736413-736490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736608-736725:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:736891-737021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737466-737630:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:738020-738115:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:738310-738508:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:738769-738874:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:739134-739266:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:739352-739487:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:739715-739823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:740127-740202:1:exon

LOC125337626
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(741870..745049)
location: region:741870-745049:-1
so has part: feature:741870-745049:-1:exon
subclass of: SO_0000010

125337626
type: Gene
SIO_000068: ncbigene

position:741870:-1
position: 741870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745049:-1
position: 745049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741870-745049:-1:exon

LOC125337626
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125337626
product: interferon-induced protein with tetratricopeptide repeats 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327548.1
SIO_010081: LOC125337626
subclass of: SO_0000673
so part of: LOC125337626
location: complement(join(741870..743888,744725..745049))
location: region:741870-745049:-1
so has part: feature:744725-745049:-1:exon
so has part: feature:741870-743888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:744725-745049:-1:exon

position:744725:-1
position: 744725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:741870-743888:-1:exon

position:743888:-1
position: 743888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125337626
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125337626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced protein with tetratricopeptide repeats 1-like
translation: MSKEQLKEKLDALQCHFTWKMGASSFNPLHILQKLDVEIKHTAHQNQVALLGLQAYLHQLNNQSTEALRSLRAAEEYNREEEQPASTAGSLIIYGNYAWIYYLQASYQEAESCLERIQQLCPTPWDVRLIPHIQAQKGWSLLAIRARNGERARECFNVALMLEPENRSFHTGLGMALYSSWIFFRQPDIASEAIIQLERIVHEQPNNYKAKIYLARLLEQLDRERSIGLIEECSENSSDPEVLKSSALFWMPQSTERAVEILQRALQQDPGYHLLYQALAKCYKQQWLEAKQEDKNNILDAAIKDLQQIIQKHPDLDLTLVKLQLAEFIGERDPAQEEEMYKELQEKIDTLSLRCRQALNLHWGKFFLYRKRSLDMAKAKFMDGYSITVQTNQRRECGCRLRKMAHLYQRAGDTAATEAILRFLKEANWHLPTEFAALGLDDGESLIPMRE
SIO_010081: LOC125337626
subclass of: SO_0000673
so part of: LOC125337626
location: complement(join(742538..743888,744725..744729))
location: region:742538-744729:-1
so has part: feature:744725-744729:-1:exon
so has part: feature:742538-743888:-1:exon

XP_048183505.1
type: Protein
SIO_000068: ncbiprotein

position:742538:-1
position: 742538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744729:-1
position: 744729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744725-744729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742538-743888:-1:exon

HDAC7
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 759968..816483
location: region:759968-816483:1
so has part: feature:759968-816483:1:exon
subclass of: SO_0000010

125337589
type: Gene
SIO_000068: ncbigene

position:759968:1
position: 759968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816483:1
position: 816483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759968-816483:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HDAC7
product: histone deacetylase 7, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327457.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(759968..760163,804500..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..816483)
location: region:759968-816483:1
so has part: feature:759968-760163:1:exon
so has part: feature:804500-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-816483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759968-760163:1:exon

position:760163:1
position: 760163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804500-804690:1:exon

position:804500:1
position: 804500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804690:1
position: 804690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:805841-805931:1:exon

position:805841:1
position: 805841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805931:1
position: 805931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:806735-806846:1:exon

position:806735:1
position: 806735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806846:1
position: 806846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:806936-807051:1:exon

position:806936:1
position: 806936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807051:1
position: 807051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:807160-807282:1:exon

position:807160:1
position: 807160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807282:1
position: 807282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:807665-807774:1:exon

position:807665:1
position: 807665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807774:1
position: 807774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:808061-808177:1:exon

position:808061:1
position: 808061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808177:1
position: 808177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:808337-808535:1:exon

position:808337:1
position: 808337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808535:1
position: 808535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:808621-808829:1:exon

position:808621:1
position: 808621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808829:1
position: 808829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:809055-809264:1:exon

position:809055:1
position: 809055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809264:1
position: 809264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:809643-809862:1:exon

position:809643:1
position: 809643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809862:1
position: 809862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:810275-810408:1:exon

position:810275:1
position: 810275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810408:1
position: 810408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:811123-811243:1:exon

position:811123:1
position: 811123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811243:1
position: 811243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:811392-811441:1:exon

position:811392:1
position: 811392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811441:1
position: 811441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:812360-812467:1:exon

position:812360:1
position: 812360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812467:1
position: 812467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:812576-812631:1:exon

position:812576:1
position: 812576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812631:1
position: 812631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:812793-812880:1:exon

position:812793:1
position: 812793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812880:1
position: 812880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:813114-813233:1:exon

position:813114:1
position: 813114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813233:1
position: 813233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:813583-813680:1:exon

position:813583:1
position: 813583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813680:1
position: 813680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:813764-813882:1:exon

position:813764:1
position: 813764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813882:1
position: 813882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:814019-814152:1:exon

position:814019:1
position: 814019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814152:1
position: 814152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:814239-814323:1:exon

position:814239:1
position: 814239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814323:1
position: 814323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:814822-814960:1:exon

position:814822:1
position: 814822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814960:1
position: 814960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:815263-816483:1:exon

position:815263:1
position: 815263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X2
translation: MQGQSRAAVTPCTSPRVPQAVPMDLRIGQRVVKPQDTALLALKQQQLQHQLFLASLHQQQVEQLAHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPPAALPYRSLEPLDPEGPSPPMLSTFLPPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTAPGVAHETPLAQRLMMQESSLAQFALQSAASLPAITLGLPATTSARGEAERRALPSLAHRVPVLNGPVLQGTHSPVFIPASLEQHEASSPLSPRLQPVIILEPSVTHAPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQSPKAIQQHLVFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAAAEGGDPTRTRVEPPRPSSSGKEPERTQKMGQPQEELVLQQAFLWDSFQRVQQQLLKRQTLADPPVVPPGHTGHRPLSRAQSSPATATVSLPAQDTKALSLPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(760145..760163,804500..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..815308)
location: region:760145-815308:1
so has part: feature:760145-760163:1:exon
so has part: feature:804500-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-815308:1:exon

XP_048183414.1
type: Protein
SIO_000068: ncbiprotein

position:760145:1
position: 760145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815308:1
position: 815308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760145-760163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804500-804690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:815263-815308:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HDAC7
product: histone deacetylase 7, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327459.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(776557..776648,804500..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..816483)
location: region:776557-816483:1
so has part: feature:776557-776648:1:exon
so has part: feature:804500-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-816483:1:exon

position:776557:1
position: 776557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776557-776648:1:exon

position:776648:1
position: 776648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804500-804690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:815263-816483:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HDAC7
product: histone deacetylase 7, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327456.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(783364..783822,804500..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..816483)
location: region:783364-816483:1
so has part: feature:783364-783822:1:exon
so has part: feature:804500-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-816483:1:exon

position:783364:1
position: 783364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783364-783822:1:exon

position:783822:1
position: 783822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804500-804690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:815263-816483:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X1
translation: MRSRGFPGAELAGCSQGAAPGLEISTTLVMFSPSSAVTPCTSPRVPQAVPMDLRIGQRVVKPQDTALLALKQQQLQHQLFLASLHQQQVEQLAHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPPAALPYRSLEPLDPEGPSPPMLSTFLPPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTAPGVAHETPLAQRLMMQESSLAQFALQSAASLPAITLGLPATTSARGEAERRALPSLAHRVPVLNGPVLQGTHSPVFIPASLEQHEASSPLSPRLQPVIILEPSVTHAPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQSPKAIQQHLVFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAAAEGGDPTRTRVEPPRPSSSGKEPERTQKMGQPQEELVLQQAFLWDSFQRVQQQLLKRQTLADPPVVPPGHTGHRPLSRAQSSPATATVSLPAQDTKALSLPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(783720..783822,804500..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..815308)
location: region:783720-815308:1
so has part: feature:783720-783822:1:exon
so has part: feature:804500-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-815308:1:exon

XP_048183413.1
type: Protein
SIO_000068: ncbiprotein

position:783720:1
position: 783720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783720-783822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804500-804690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:815263-815308:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HDAC7
product: histone deacetylase 7, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327458.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(795578..795659,804500..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..816483)
location: region:795578-816483:1
so has part: feature:795578-795659:1:exon
so has part: feature:804500-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-816483:1:exon

position:795578:1
position: 795578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795578-795659:1:exon

position:795659:1
position: 795659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804500-804690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:815263-816483:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X3
translation: MPSMAAVTPCTSPRVPQAVPMDLRIGQRVVKPQDTALLALKQQQLQHQLFLASLHQQQVEQLAHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPPAALPYRSLEPLDPEGPSPPMLSTFLPPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTAPGVAHETPLAQRLMMQESSLAQFALQSAASLPAITLGLPATTSARGEAERRALPSLAHRVPVLNGPVLQGTHSPVFIPASLEQHEASSPLSPRLQPVIILEPSVTHAPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQSPKAIQQHLVFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAAAEGGDPTRTRVEPPRPSSSGKEPERTQKMGQPQEELVLQQAFLWDSFQRVQQQLLKRQTLADPPVVPPGHTGHRPLSRAQSSPATATVSLPAQDTKALSLPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(795647..795659,804500..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..815308)
location: region:795647-815308:1
so has part: feature:795647-795659:1:exon
so has part: feature:804500-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-815308:1:exon

XP_048183415.1
type: Protein
SIO_000068: ncbiprotein

position:795647:1
position: 795647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795647-795659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804500-804690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:815263-815308:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HDAC7
product: histone deacetylase 7, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327462.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(797339..797554,804500..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..816483)
location: region:797339-816483:1
so has part: feature:797339-797554:1:exon
so has part: feature:804500-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-816483:1:exon

position:797339:1
position: 797339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797339-797554:1:exon

position:797554:1
position: 797554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804500-804690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:815263-816483:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: HDAC7
product: histone deacetylase 7, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048327460.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(799547..800005,804500..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..816483)
location: region:799547-816483:1
so has part: feature:799547-800005:1:exon
so has part: feature:804500-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-816483:1:exon

position:799547:1
position: 799547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799547-800005:1:exon

position:800005:1
position: 800005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804500-804690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:815263-816483:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X4
translation: MDLRIGQRVVKPQDTALLALKQQQLQHQLFLASLHQQQVEQLAHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPPAALPYRSLEPLDPEGPSPPMLSTFLPPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTAPGVAHETPLAQRLMMQESSLAQFALQSAASLPAITLGLPATTSARGEAERRALPSLAHRVPVLNGPVLQGTHSPVFIPASLEQHEASSPLSPRLQPVIILEPSVTHAPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQSPKAIQQHLVFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAAAEGGDPTRTRVEPPRPSSSGKEPERTQKMGQPQEELVLQQAFLWDSFQRVQQQLLKRQTLADPPVVPPGHTGHRPLSRAQSSPATATVSLPAQDTKALSLPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(804547..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..815308)
location: region:804547-815308:1
so has part: feature:804547-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-815308:1:exon

XP_048183416.1
type: Protein
SIO_000068: ncbiprotein

position:804547:1
position: 804547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804547-804690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:815263-815308:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X4
translation: MDLRIGQRVVKPQDTALLALKQQQLQHQLFLASLHQQQVEQLAHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPPAALPYRSLEPLDPEGPSPPMLSTFLPPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTAPGVAHETPLAQRLMMQESSLAQFALQSAASLPAITLGLPATTSARGEAERRALPSLAHRVPVLNGPVLQGTHSPVFIPASLEQHEASSPLSPRLQPVIILEPSVTHAPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQSPKAIQQHLVFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAAAEGGDPTRTRVEPPRPSSSGKEPERTQKMGQPQEELVLQQAFLWDSFQRVQQQLLKRQTLADPPVVPPGHTGHRPLSRAQSSPATATVSLPAQDTKALSLPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(804547..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..815308)
location: region:804547-815308:1
so has part: feature:804547-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-815308:1:exon

XP_048183417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:804547-804690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:815263-815308:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X4
translation: MDLRIGQRVVKPQDTALLALKQQQLQHQLFLASLHQQQVEQLAHQHVRVAMESPHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAALERTSNAPPAALPYRSLEPLDPEGPSPPMLSTFLPPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPEAIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTAPGVAHETPLAQRLMMQESSLAQFALQSAASLPAITLGLPATTSARGEAERRALPSLAHRVPVLNGPVLQGTHSPVFIPASLEQHEASSPLSPRLQPVIILEPSVTHAPLVAVPGLGTVPFSFTPSLISAERLSLPGHHKPLGRTRSEPLPQSPKAIQQHLVFQQHHAHFLERLKQQTHLGKRMAKSSEKPRLRQIPSSEDMEAEGTLPEAAAEGGDPTRTRVEPPRPSSSGKEPERTQKMGQPQEELVLQQAFLWDSFQRVQQQLLKRQTLADPPVVPPGHTGHRPLSRAQSSPATATVSLPAQDTKALSLPVQEQPPKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSRCECLRGRKATLEELQCVHSERHVLLYGTNPLNRLKLDNGKLAGILSQRTFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVATRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPEVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAHEFCPDVVLVSAGFDAAEGHPPPLGGYKVSAKCFGYMTKQLMSLAGGAVVLALEGGHDLTAICDASEACVSALLGHEPEPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEADEVETVTALASLSVAVMVEKRAQEEPMEQEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(804547..804690,805841..805931,806735..806846,806936..807051,807160..807282,807665..807774,808061..808177,808337..808535,808621..808829,809055..809264,809643..809862,810275..810408,811123..811243,811392..811441,812360..812467,812576..812631,812793..812880,813114..813233,813583..813680,813764..813882,814019..814152,814239..814323,814822..814960,815263..815308)
location: region:804547-815308:1
so has part: feature:804547-804690:1:exon
so has part: feature:805841-805931:1:exon
so has part: feature:806735-806846:1:exon
so has part: feature:806936-807051:1:exon
so has part: feature:807160-807282:1:exon
so has part: feature:807665-807774:1:exon
so has part: feature:808061-808177:1:exon
so has part: feature:808337-808535:1:exon
so has part: feature:808621-808829:1:exon
so has part: feature:809055-809264:1:exon
so has part: feature:809643-809862:1:exon
so has part: feature:810275-810408:1:exon
so has part: feature:811123-811243:1:exon
so has part: feature:811392-811441:1:exon
so has part: feature:812360-812467:1:exon
so has part: feature:812576-812631:1:exon
so has part: feature:812793-812880:1:exon
so has part: feature:813114-813233:1:exon
so has part: feature:813583-813680:1:exon
so has part: feature:813764-813882:1:exon
so has part: feature:814019-814152:1:exon
so has part: feature:814239-814323:1:exon
so has part: feature:814822-814960:1:exon
so has part: feature:815263-815308:1:exon

XP_048183419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:804547-804690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805841-805931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806735-806846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806936-807051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:807160-807282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807665-807774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:808061-808177:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:808337-808535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:808621-808829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:809055-809264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:809643-809862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:810275-810408:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:811123-811243:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:811392-811441:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:812360-812467:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:812576-812631:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812793-812880:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:813114-813233:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:813583-813680:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813764-813882:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:814019-814152:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:814239-814323:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:814822-814960:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:815263-815308:1:exon

LOC125337666
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337666
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(818010..823164)
location: region:818010-823164:-1
so has part: feature:818010-823164:-1:exon
subclass of: SO_0000010

125337666
type: Gene
SIO_000068: ncbigene

position:818010:-1
position: 818010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823164:-1
position: 823164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818010-823164:-1:exon

LOC125337666
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125337666
product: twist-related protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_048327610.1
SIO_010081: LOC125337666
subclass of: SO_0000673
so part of: LOC125337666
location: complement(join(818010..818097,822020..823164))
location: region:818010-823164:-1
so has part: feature:822020-823164:-1:exon
so has part: feature:818010-818097:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822020-823164:-1:exon

position:822020:-1
position: 822020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:818010-818097:-1:exon

position:818097:-1
position: 818097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125337666
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125337666
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: twist-related protein 2-like
translation: MKEENLSPESPEGSAATSEDEAERLPKKSGRKRGQGPGGAPSPQGKRSRRSPAPQPPEDAHAQRVIANVRERQRTQSLNDAFAELRKIIPTLPSDKLSKIQTLKLAARYIDFLCQVLQSDELDHKVATSCNFLAHERLSYAFSVWRMEGAWSMSASH
SIO_010081: LOC125337666
subclass of: SO_0000673
so part of: LOC125337666
location: complement(822025..822498)
location: region:822025-822498:-1
so has part: feature:822025-822498:-1:exon

XP_048183567.1
type: Protein
SIO_000068: ncbiprotein

position:822025:-1
position: 822025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822498:-1
position: 822498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822025-822498:-1:exon

LOC125337643
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(826059..828978)
location: region:826059-828978:-1
so has part: feature:826059-828978:-1:exon
subclass of: SO_0000010

125337643
type: Gene
SIO_000068: ncbigene

position:826059:-1
position: 826059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828978:-1
position: 828978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826059-828978:-1:exon

LOC125337643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125337643
product: uncharacterized LOC125337643
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_048327570.1
SIO_010081: LOC125337643
subclass of: SO_0000673
so part of: LOC125337643
location: complement(join(826059..828048,828826..828978))
location: region:826059-828978:-1
so has part: feature:828826-828978:-1:exon
so has part: feature:826059-828048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828826-828978:-1:exon

position:828826:-1
position: 828826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:826059-828048:-1:exon

position:828048:-1
position: 828048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125337643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125337643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125337643
translation: MDSSWFAPRGCRGRCHPRCHPVPPQIQRSLTSLAALEFPGIPGRGGSWEGRRSLLPGAGQCEESSGTEEPLLDFRGYLGSWRALVAPTVTSTSLGPTGGSRHLPRVRRWPRSPFCCPGRDSKAPEGKQQIFCIFPICSQDVARAEAAPQRLRMSLVGLGGPSRRLWGREVLGTPSSCAGTQIPAGCPQRGSGGVPQLRELQQRGPGASRGTQGCCWPWGQAELGDGPGGTCRRVTGPCSQGNPDGATAGPIFPLEVCAVPWEQGLEAGMCQAQPGTGSVPQAFQDTAMPPWCPCSLDPPGHSAGSAWICPLFPGWEKAENPPNSTSLTASRGSGREREDGTRETVRKSP
SIO_010081: LOC125337643
subclass of: SO_0000673
so part of: LOC125337643
location: complement(join(827152..828048,828826..828978))
location: region:827152-828978:-1
so has part: feature:828826-828978:-1:exon
so has part: feature:827152-828048:-1:exon

XP_048183527.1
type: Protein
SIO_000068: ncbiprotein

position:827152:-1
position: 827152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828826-828978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827152-828048:-1:exon

SLC48A1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(828885..835518)
location: region:828885-835518:-1
so has part: feature:828885-835518:-1:exon
subclass of: SO_0000010

125337667
type: Gene
SIO_000068: ncbigene

position:828885:-1
position: 828885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835518:-1
position: 835518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828885-835518:-1:exon

SLC48A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: SLC48A1
product: solute carrier family 48 member 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_048327611.1
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(828885..829910,831354..831521,835352..835518))
location: region:828885-835518:-1
so has part: feature:835352-835518:-1:exon
so has part: feature:831354-831521:-1:exon
so has part: feature:828885-829910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:835352-835518:-1:exon

position:835352:-1
position: 835352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:831354-831521:-1:exon

position:831354:-1
position: 831354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831521:-1
position: 831521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:828885-829910:-1:exon

position:829910:-1
position: 829910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC48A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: SLC48A1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: heme transporter HRG1
translation: MALRGALALRVAYASFGALSGLSAFCAWSAVPALRQPGTAAAGGLSGVLALWALITHVMYLQDYWRTWLKGLRFFLCVGILFSALSGLGFCAFLALAITQHQSLTDPKSYYLSCVWSFMALKWALLLSLYSHRYRAEFADISILSDF
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(829773..829910,831354..831521,835352..835490))
location: region:829773-835490:-1
so has part: feature:835352-835490:-1:exon
so has part: feature:831354-831521:-1:exon
so has part: feature:829773-829910:-1:exon

XP_048183568.1
type: Protein
SIO_000068: ncbiprotein

position:829773:-1
position: 829773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835490:-1
position: 835490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835352-835490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831354-831521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829773-829910:-1:exon

LOC125337996
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: LOC125337996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 835489..840367
location: region:835489-840367:1
so has part: feature:835489-840367:1:exon
subclass of: SO_0000010

125337996
type: Gene
SIO_000068: ncbigene

position:835489:1
position: 835489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840367:1
position: 840367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835489-840367:1:exon

LOC125337996
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: LOC125337996
product: putative per-hexamer repeat protein 5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328310.1
SIO_010081: LOC125337996
subclass of: SO_0000673
so part of: LOC125337996
location: join(835489..835516,835627..836786,837607..837751,838169..838249,840078..840367)
location: region:835489-840367:1
so has part: feature:835489-835516:1:exon
so has part: feature:835627-836786:1:exon
so has part: feature:837607-837751:1:exon
so has part: feature:838169-838249:1:exon
so has part: feature:840078-840367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:835489-835516:1:exon

position:835516:1
position: 835516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:835627-836786:1:exon

position:835627:1
position: 835627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836786:1
position: 836786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:837607-837751:1:exon

position:837607:1
position: 837607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837751:1
position: 837751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:838169-838249:1:exon

position:838169:1
position: 838169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838249:1
position: 838249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:840078-840367:1:exon

position:840078:1
position: 840078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125337996
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: LOC125337996
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative per-hexamer repeat protein 5
translation: MAASARPAPGTRPGNGTGTRPRDRDTPRERDRNLPTGQGHAHGTGTRPGNGTGTRPRHQDTPREGDRNPPTGQGHAPGPGHAPGTGQGPAHGTGTRPGNGTGTRPRDRDTPRDRDRDPPTAPGHAPGQGHAPGTGTRPGTGTGTRPGTGTGTRPGNGTGTRPRERDTPQDTPRDRDTPRDRDRDPPSAPGHAPGTGQGPAHGTGTPPGNGTGKGTRPRHRDKDTPSAPGRAHGTGTRPGNGTRPGTGTLPLSHRDTPPGTLPATGTRTPGPRHDTGTHPSIPGHAHRDRDTHTGTATRNRETAPGHAHRHRDTPTDTGTRPSIPGHAHRHRDTPTDTGTRPPTPGHAPGPAPPQRAPWRTGGLRRGHGGTGTQRGGHGGDTEGTRRARDPAGHRAQIPAVGWGRATNPGRTRRIPGFGGHAGTEPLGLRDEASAPPDREQLTGKGIRLPGHVPGAERAASAGSRQLRGAQTGRSRVGTERPGEQDTSRSPDDNEGMK
SIO_010081: LOC125337996
subclass of: SO_0000673
so part of: LOC125337996
location: join(835489..835516,835627..836786,837607..837751,838169..838249,840078..840157)
location: region:835489-840157:1
so has part: feature:835489-835516:1:exon
so has part: feature:835627-836786:1:exon
so has part: feature:837607-837751:1:exon
so has part: feature:838169-838249:1:exon
so has part: feature:840078-840157:1:exon

XP_048184267.1
type: Protein
SIO_000068: ncbiprotein

position:840157:1
position: 840157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835489-835516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835627-836786:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:837607-837751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838169-838249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:840078-840157:1:exon

RAPGEF3
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 841555..853939
location: region:841555-853939:1
so has part: feature:841555-853939:1:exon
subclass of: SO_0000010

125337998
type: Gene
SIO_000068: ncbigene

position:841555:1
position: 841555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853939:1
position: 853939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841555-853939:1:exon

RAPGEF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 134902
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048328311.1
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(841555..841744,843261..843481,846886..846939,847158..847264,847344..847465,847540..847714,847887..847971,848225..848285,848385..848461,848545..848691,848777..848886,849099..849187,849700..849778,849969..850119,850202..850284,850564..850603,850722..850803,850873..851019,851110..851207,851341..851466,851552..851733,851811..851901,852012..852062,852624..852711,852811..852875,853059..853113,853198..853269,853536..853939)
location: region:841555-853939:1
so has part: feature:841555-841744:1:exon
so has part: feature:843261-843481:1:exon
so has part: feature:846886-846939:1:exon
so has part: feature:847158-847264:1:exon
so has part: feature:847344-847465:1:exon
so has part: feature:847540-847714:1:exon
so has part: feature:847887-847971:1:exon
so has part: feature:848225-848285:1:exon
so has part: feature:848385-848461:1:exon
so has part: feature:848545-848691:1:exon
so has part: feature:848777-848886:1:exon
so has part: feature:849099-849187:1:exon
so has part: feature:849700-849778:1:exon
so has part: feature:849969-850119:1:exon
so has part: feature:850202-850284:1:exon
so has part: feature:850564-850603:1:exon
so has part: feature:850722-850803:1:exon
so has part: feature:850873-851019:1:exon
so has part: feature:851110-851207:1:exon
so has part: feature:851341-851466:1:exon
so has part: feature:851552-851733:1:exon
so has part: feature:851811-851901:1:exon
so has part: feature:852012-852062:1:exon
so has part: feature:852624-852711:1:exon
so has part: feature:852811-852875:1:exon
so has part: feature:853059-853113:1:exon
so has part: feature:853198-853269:1:exon
so has part: feature:853536-853939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:841555-841744:1:exon

position:841744:1
position: 841744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:843261-843481:1:exon

position:843261:1
position: 843261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843481:1
position: 843481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:846886-846939:1:exon

position:846886:1
position: 846886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846939:1
position: 846939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:847158-847264:1:exon

position:847158:1
position: 847158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847264:1
position: 847264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:847344-847465:1:exon

position:847344:1
position: 847344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847465:1
position: 847465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:847540-847714:1:exon

position:847540:1
position: 847540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847714:1
position: 847714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:847887-847971:1:exon

position:847887:1
position: 847887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847971:1
position: 847971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:848225-848285:1:exon

position:848225:1
position: 848225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848285:1
position: 848285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:848385-848461:1:exon

position:848385:1
position: 848385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848461:1
position: 848461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:848545-848691:1:exon

position:848545:1
position: 848545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848691:1
position: 848691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:848777-848886:1:exon

position:848777:1
position: 848777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848886:1
position: 848886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:849099-849187:1:exon

position:849099:1
position: 849099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849187:1
position: 849187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:849700-849778:1:exon

position:849700:1
position: 849700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849778:1
position: 849778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:849969-850119:1:exon

position:849969:1
position: 849969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850119:1
position: 850119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:850202-850284:1:exon

position:850202:1
position: 850202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850284:1
position: 850284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:850564-850603:1:exon

position:850564:1
position: 850564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850603:1
position: 850603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:850722-850803:1:exon

position:850722:1
position: 850722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850803:1
position: 850803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:850873-851019:1:exon

position:850873:1
position: 850873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851019:1
position: 851019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:851110-851207:1:exon

position:851110:1
position: 851110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851207:1
position: 851207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:851341-851466:1:exon

position:851341:1
position: 851341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851466:1
position: 851466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:851552-851733:1:exon

position:851552:1
position: 851552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851733:1
position: 851733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:851811-851901:1:exon

position:851811:1
position: 851811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851901:1
position: 851901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:852012-852062:1:exon

position:852012:1
position: 852012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852062:1
position: 852062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:852624-852711:1:exon

position:852624:1
position: 852624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852711:1
position: 852711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:852811-852875:1:exon

position:852811:1
position: 852811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852875:1
position: 852875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:853059-853113:1:exon

position:853059:1
position: 853059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853113:1
position: 853113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:853198-853269:1:exon

position:853198:1
position: 853198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853269:1
position: 853269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:853536-853939:1:exon

position:853536:1
position: 853536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAPGEF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rap guanine nucleotide exchange factor 3
translation: MLRLISRGIGIPTPPTAPRGSGVCDPRPSHTPFRVPELLQAIPHRLGKGSQLQRDWEPFPGMRAAGGARRGAGPGRAGLEPGSGASAAPSQPPGGPGADGARLSGLLRRMHLFRSSSYEVRLEGAGGSLPRIQGIRWTPLLDSESSLDYGHSITQASTEKIWRAGKLLFAHLSSSRPGLIRDHKHHLRHHRQCCSGKDLVDWLLSAGVAVQTRSQAVGIGQVLVDGGVLTHVRQEWHFQDKDTQFYRFAELELSPEPGAGPRDPEELLEALGFLAQLGPDALLSMALRKPPAQRTQDELELIFEELLHIKAVAHLSNSVKRELAAVLMFEGHQRAGTVLFSQGDKGTSWYIIWKGSVNVVTHGKGLVATLHEGDDFGQLALVNDAPRAATILLREDNCHFLRVDKQDFNRILKDVEANTVRLKEHGKVVLVLQKDLQGGSGQAASARSSRYLVMAGTPEKILEHLLEFMRLDATLYDPVDTLLGDFLLTYTVFMPTSQLCRALLHHFRAEPLEGSEQDKATYSLRKRRKILRLVSQWVLLYGRLLQGDRSTTALLQNLADLASRDPRLGGLGQEQGQERRRPRALENGDGSVSPQPKARSSGMWPGSPEEAILDSTCTLRAQDKVPYEIFRADHSCLVSVLPVNASVRDVLRALAPRLGQDREHVLVKVNSAGDRAVLPPDAVGVFTALGLNERLFVVSRDELGSLTPHPEQLGPHAGSSDTLDLISSKDLASHLTDYDWNLFKSIHQVEMIHYIVGPHKFHEVTTANLARVMRRFNELQFWVATELCLCPELGRRTQLLRKFIKLAAHLKEQKNLNSFFAVMFGVSNTAVTRLAKTWERLPHKIRKLHSALERMLDPSWNHRVYRLAVAKMSPPIIPFVPLLLKDMTFIHEGNRTLAENLINFEKMHMMAKTMRVLQRCRGHAHAPLSPLRNRSPHRPEDTKAVRISTCSEQSLSVRNPVSTWAYLQHLRAIDSQKELLRLSRDLEP
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(841555..841744,843261..843481,846886..846939,847158..847264,847344..847465,847540..847714,847887..847971,848225..848285,848385..848461,848545..848691,848777..848886,849099..849187,849700..849778,849969..850119,850202..850284,850564..850603,850722..850803,850873..851019,851110..851207,851341..851466,851552..851733,851811..851901,852012..852062,852624..852711,852811..852875,853059..853113,853198..853269,853536..853654)
location: region:841555-853654:1
so has part: feature:841555-841744:1:exon
so has part: feature:843261-843481:1:exon
so has part: feature:846886-846939:1:exon
so has part: feature:847158-847264:1:exon
so has part: feature:847344-847465:1:exon
so has part: feature:847540-847714:1:exon
so has part: feature:847887-847971:1:exon
so has part: feature:848225-848285:1:exon
so has part: feature:848385-848461:1:exon
so has part: feature:848545-848691:1:exon
so has part: feature:848777-848886:1:exon
so has part: feature:849099-849187:1:exon
so has part: feature:849700-849778:1:exon
so has part: feature:849969-850119:1:exon
so has part: feature:850202-850284:1:exon
so has part: feature:850564-850603:1:exon
so has part: feature:850722-850803:1:exon
so has part: feature:850873-851019:1:exon
so has part: feature:851110-851207:1:exon
so has part: feature:851341-851466:1:exon
so has part: feature:851552-851733:1:exon
so has part: feature:851811-851901:1:exon
so has part: feature:852012-852062:1:exon
so has part: feature:852624-852711:1:exon
so has part: feature:852811-852875:1:exon
so has part: feature:853059-853113:1:exon
so has part: feature:853198-853269:1:exon
so has part: feature:853536-853654:1:exon

XP_048184268.1
type: Protein
SIO_000068: ncbiprotein