Corvus hawaiiensis isolate SB33 mitochondrion, complete genome.
type: Entry
definition: Corvus hawaiiensis isolate SB33 mitochondrion, complete genome.
sequence version: NC_026783.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_026783.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Corvus hawaiiensis (hawaiian crow)
organism: Corvus hawaiiensis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to KP161620.\n\n##Assembly-Data-START##\nAssembly Method :: DNAstar Lasergene v. v11\nCoverage :: 400X\nSequencing Technology :: IonTorrent\n##Assembly-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16898
topology: circular
so has quality: SO_0000988
location: 1..16898
location: region:1-16898:1
RO_0002162: 134902

NC_026783
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Effects of inbreeding and parental incubation on captive breeding success in Hawaiian crows
author: Hoeck, P.E.
author: Wolak, M.E.
author: Switzer, R.A.
author: Kuehler, C.M.
author: Lieberman, A.A.
journal: Biol. Conserv. 184, 357-364 (2015)

2
title: Direct Submission
journal: Submitted (03-APR-2015) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Hoeck, P.E.
author: Wolak, M.E.
author: Switzer, R.A.
author: Kuehler, C.M.
author: Lieberman, A.A.
journal: Submitted (17-NOV-2014) San Diego Zoo Institute for Conservation Research, San Diego Zoo Global, 15600 San Pasqual Valley Road, Escondido, CA 92027-7000, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16898:1
position: 16898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16898:1:source
so part of: sequence
organism: Corvus hawaiiensis
organelle: mitochondrion
mol type: genomic DNA
isolate: SB33

134902
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Phe
so part of: sequence
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:region

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 134902
product: 12S ribosomal RNA
so part of: sequence
location: 70..1046
location: region:70-1046:1
so has part: feature:70-1046:1:region

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046:1
position: 1046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-1046:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Val
so part of: sequence
location: 1047..1116
location: region:1047-1116:1
so has part: feature:1047-1116:1:region

position:1047:1
position: 1047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116:1
position: 1116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047-1116:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 134902
product: 16S ribosomal RNA
so part of: sequence
location: 1117..2715
location: region:1117-2715:1
so has part: feature:1117-2715:1:region

position:1117:1
position: 1117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2715:1
position: 2715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117-2715:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Leu
so part of: sequence
location: 2716..2790
location: region:2716-2790:1
so has part: feature:2716-2790:1:region

position:2716:1
position: 2716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2790:1
position: 2790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2716-2790:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ND1
so part of: sequence
location: 2800..3777
location: region:2800-3777:1
so has part: feature:2800-3777:1:exon
subclass of: SO_0000010

24069952
type: Gene
SIO_000068: ncbigene

position:2800:1
position: 2800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3777:1
position: 3777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2800-3777:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MANYPILVNLIMALSYAIPILIAVAFLTLVERKILSYMQGRKGPNVVGPFGLLQPVADGVKLFIKEPIRPSTSSPILFITTPMLALLLAITIWTPLPIPFPLADMNLGLLFMLAMSSLAVYSILWSGWASNSKYALIGSLRAVAQTISYEVTLAIILLSIILLSGNYTLSTLAVVQEPLFLIFSCWPLAMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTVILFFNPSLYNPPQELFPVILATKVLLLSMGFLWIRASYPRFRYDQLMHLLWKNFLPLALALCLWHISMPISYAGLPPYL
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2800..3777
location: region:2800-3777:1
so has part: feature:2800-3777:1:exon

YP_009129970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2800-3777:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Ile
so part of: sequence
location: 3786..3859
location: region:3786-3859:1
so has part: feature:3786-3859:1:region

position:3786:1
position: 3786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3859:1
position: 3859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3786-3859:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Gln
so part of: sequence
location: complement(3865..3935)
location: region:3865-3935:-1
so has part: feature:3865-3935:-1:region

position:3865:-1
position: 3865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3935:-1
position: 3935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3865-3935:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Met
so part of: sequence
location: 3935..4003
location: region:3935-4003:1
so has part: feature:3935-4003:1:region

position:3935:1
position: 3935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4003:1
position: 4003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3935-4003:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ND2
so part of: sequence
location: 4004..5044
location: region:4004-5044:1
so has part: feature:4004-5044:1:exon
subclass of: SO_0000010

24069940
type: Gene
SIO_000068: ncbigene

position:4004:1
position: 4004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5044:1
position: 5044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4004-5044:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ND2
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPQAKLIFVTSLLLGTTITISSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQATASTLVLFSSMTNAWYTGQWDITQMTHPTSSLILTAAISMKLGLVPFHFWFPEVLQGSPLITGLLLSTVMKFPPITLLYMTSLSLNPALLTTLAILSVALGGWMGLNQTQTRKIMAFSSISHLGWMAIILIYYPKLTLLNFYLYAMMTAAVFLTLNSMKVLNLSTLMTAWTKAPSLSTILLLTLLSLAGLPPLTGFLPKWLIIQELTKQDMAPTAIIISLLSLLSLFFYLRLAYCATITLPPHTTNHMKQWHTNKPINSSIAVLTTLSIMLLPASPMLITII
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4004..5044
location: region:4004-5044:1
so has part: feature:4004-5044:1:exon

YP_009129971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4004-5044:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Trp
so part of: sequence
location: 5047..5116
location: region:5047-5116:1
so has part: feature:5047-5116:1:region

position:5047:1
position: 5047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5116:1
position: 5116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5047-5116:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Ala
so part of: sequence
location: complement(5118..5186)
location: region:5118-5186:-1
so has part: feature:5118-5186:-1:region

position:5118:-1
position: 5118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5186:-1
position: 5186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5118-5186:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Asn
so part of: sequence
location: complement(5193..5266)
location: region:5193-5266:-1
so has part: feature:5193-5266:-1:region

position:5193:-1
position: 5193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5266:-1
position: 5266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5193-5266:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Cys
so part of: sequence
location: complement(5269..5335)
location: region:5269-5335:-1
so has part: feature:5269-5335:-1:region

position:5269:-1
position: 5269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5335:-1
position: 5335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5269-5335:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Tyr
so part of: sequence
location: complement(5335..5405)
location: region:5335-5405:-1
so has part: feature:5335-5405:-1:region

position:5405:-1
position: 5405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5335-5405:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
alternative label: COI
gene: COX1
gene synonym: COI
so part of: sequence
location: 5407..6957
location: region:5407-6957:1
so has part: feature:5407-6957:1:exon
subclass of: SO_0000010

24069941
type: Gene
SIO_000068: ncbigene

position:5407:1
position: 5407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6957:1
position: 6957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5407-6957:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
alternative label: COI
gene: COX1
gene synonym: COI
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MTFTNRWLFSTNHKDIGTLYLIFGAWAGMVGTALSLLIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVESGVGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPALSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNFNTTFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMLSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGTIKWDPPMLWALGFIFLFTIGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLHSTWAKIHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTISSVGSLISLTAVIMLMFIIWEAFASKRKALQPELINTNVEWIHGCPPPFHTFEEPAFVQTQE
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5407..6957
location: region:5407-6957:1
so has part: feature:5407-6957:1:exon

YP_009129972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5407-6957:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Ser
so part of: sequence
location: complement(6949..7022)
location: region:6949-7022:-1
so has part: feature:6949-7022:-1:region

position:6949:-1
position: 6949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7022:-1
position: 7022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6949-7022:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Asp
so part of: sequence
location: 7028..7096
location: region:7028-7096:1
so has part: feature:7028-7096:1:region

position:7028:1
position: 7028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7096:1
position: 7096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7028-7096:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
alternative label: COII
gene: COX2
gene synonym: COII
so part of: sequence
location: 7105..7788
location: region:7105-7788:1
so has part: feature:7105-7788:1:exon
subclass of: SO_0000010

24069942
type: Gene
SIO_000068: ncbigene

position:7105:1
position: 7105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7788:1
position: 7788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7105-7788:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
alternative label: COII
gene: COX2
gene synonym: COII
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MANHMQFGFQDASSPIMEELVEFHDHALMTALAICSLVLYLLTTMLTEKLSSSTVDAQEIELVWTILPAAVLIMLALPSLRILYMMDEINEPDLTLKAIGHQWYWTYEYTDFKDLTFDSYMTPTADLPLGHFRLLEVDHRAVVPMESLVRVIVTADDVLHSWAVPSLGVKTDAIPGRLNQTSFTATRPGVFYGQCSEICGANHSFMPIVVESAPLADFENWSSLLSS
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7105..7788
location: region:7105-7788:1
so has part: feature:7105-7788:1:exon

YP_009129973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7105-7788:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Lys
so part of: sequence
location: 7790..7859
location: region:7790-7859:1
so has part: feature:7790-7859:1:region

position:7790:1
position: 7790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7859:1
position: 7859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7790-7859:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ATP8
so part of: sequence
location: 7861..8028
location: region:7861-8028:1
so has part: feature:7861-8028:1:exon
subclass of: SO_0000010

24069943
type: Gene
SIO_000068: ncbigene

position:7861:1
position: 7861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8028:1
position: 8028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7861-8028:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPNPWFFIMLTSWLTYSMIIQPKLLSFISMNPPLSKTQTTLTTSPWTWPWT
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7861..8028
location: region:7861-8028:1
so has part: feature:7861-8028:1:exon

YP_009129974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7861-8028:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ATP6
so part of: sequence
location: 8019..8702
location: region:8019-8702:1
so has part: feature:8019-8702:1:exon
subclass of: SO_0000010

24069944
type: Gene
SIO_000068: ncbigene

position:8019:1
position: 8019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8702:1
position: 8702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8019-8702:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNLSFFNQFSSPSLLGIPLILIAMTFPALLLPTQGNRWITDRLSTLQTWFINLVTKQLMMPLSNKGHKWALILTSLMMFLLLTNLLGLLPYTFTPTTQLSMNLALAVPLWLATLLVGLRNQPSISLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGHLLIQLISTATVALASTMPTISLLTLLILLLLTILEVAVAMIQAYVFVLLLSLYLQENI
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8019..8702
location: region:8019-8702:1
so has part: feature:8019-8702:1:exon

YP_009129975.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8019-8702:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
alternative label: COIII
gene: COX3
gene synonym: COIII
so part of: sequence
location: 8709..9492
location: region:8709-9492:1
so has part: feature:8709-9492:1:exon
subclass of: SO_0000010

24069945
type: Gene
SIO_000068: ncbigene

position:8709:1
position: 8709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9492:1
position: 9492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8709-9492:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
alternative label: COIII
gene: COX3
gene synonym: COIII
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9492,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MTHQAHSYHMVDPSPWPILGATAALLTTSGLTMWFHHNSPYLLITGLTSTALVMFQWWRDIIRESTFQGHHTPTVQKGLRYGMVLFITSEAFFFLGFFWAFFHSSLAPTPELGGQWPPVGIKPLNPMDVPLLNTAILLASGVTVTWAHHSIMEANRKQAIHALALTVLLGFYFTGLQAMEYYEAPFSIADGVYGSTFFVATGFHGLHVIIGSTFLLVCLLRLIKYHFTPKHHFGFEAAAWYWHFVDVVWLFLYMTIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8709..9492
location: region:8709-9492:1
so has part: feature:8709-9492:1:exon

YP_009129976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8709-9492:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Gly
so part of: sequence
location: 9493..9561
location: region:9493-9561:1
so has part: feature:9493-9561:1:region

position:9493:1
position: 9493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9561:1
position: 9561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9493-9561:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ND3
so part of: sequence
location: 9562..9912
location: region:9562-9912:1
so has part: feature:9562-9912:1:exon
subclass of: SO_0000010

24069946
type: Gene
SIO_000068: ncbigene

position:9562:1
position: 9562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9912:1
position: 9912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9562-9912:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ND3
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNMILFMMASSLILSVILTALNFWLAQMNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAMQLQTPTTTLTWSSILILLLTLGLIYEWNQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9562..9912
location: region:9562-9912:1
so has part: feature:9562-9912:1:exon

YP_009129977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9562-9912:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Arg
so part of: sequence
location: 9914..9983
location: region:9914-9983:1
so has part: feature:9914-9983:1:region

position:9914:1
position: 9914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9983:1
position: 9983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9914-9983:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ND4L
so part of: sequence
location: 9985..10281
location: region:9985-10281:1
so has part: feature:9985-10281:1:exon
subclass of: SO_0000010

24069947
type: Gene
SIO_000068: ncbigene

position:9985:1
position: 9985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10281:1
position: 10281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9985-10281:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MSALQLSFFSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALSMWPIQTQTTSATLLPLLMLAFSACEAATGLALLVASTRTHGSDHLHNFNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 9985..10281
location: region:9985-10281:1
so has part: feature:9985-10281:1:exon

YP_009129978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9985-10281:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ND4
so part of: sequence
location: 10275..11652
location: region:10275-11652:1
so has part: feature:10275-11652:1:exon
subclass of: SO_0000010

24069948
type: Gene
SIO_000068: ncbigene

position:10275:1
position: 10275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11652:1
position: 11652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10275-11652:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11652,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKIIIPTIMLLPLTFLSPCKHLWTNVTTHSLLIATVSLQWLVPTYYPSKGLTHWTSIDQISSPLLVLSCWLLPLMLMASQNHLEQEPIIRKRVFITTVITVQPFILLAFSASELMLFYIAFEATLIPTLVLITRWGNQPERLNAGIYLLFYTLASSLPLLITILHLHNQIGTLYFPMLKLSHPTMNNSWTGLLASLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITILVDPSVNNLHYPFITLALWGAVMTSAICLRQIDLKSLIAYSSVSHMGLVIAATMIQTQWAFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIVVTLFNWSPLTIILTGTTIVLTASYTLYMLMMTQRGMLPSHITSIQNSSTREHLLMALHMIPMILLIFKPELISGVPM
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10275..11652
location: region:10275-11652:1
so has part: feature:10275-11652:1:exon

YP_009129979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10275-11652:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-His
so part of: sequence
location: 11653..11721
location: region:11653-11721:1
so has part: feature:11653-11721:1:region

position:11653:1
position: 11653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11721:1
position: 11721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11653-11721:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Ser
so part of: sequence
location: 11723..11786
location: region:11723-11786:1
so has part: feature:11723-11786:1:region

position:11723:1
position: 11723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11786:1
position: 11786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11723-11786:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Leu
so part of: sequence
location: 11787..11857
location: region:11787-11857:1
so has part: feature:11787-11857:1:region

position:11787:1
position: 11787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11857:1
position: 11857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11787-11857:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ND5
so part of: sequence
location: 11858..13675
location: region:11858-13675:1
so has part: feature:11858-13675:1:exon
subclass of: SO_0000010

24069949
type: Gene
SIO_000068: ncbigene

position:11858:1
position: 11858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13675:1
position: 13675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11858-13675:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MDQMLILNTFMLLTLAVLCTPIIFPMLSDSLKNTPTIITNTVKTSFLISLIPMTMYIHSGMESLTSFWEWKFIMNFKIPISLTMDFYSLTFFPIALFVSWSILQFATWYMASDPHITKFFTFLLLFLIAMLILIISNNLFLLFIGWEGVGIMSFLLISWWHGRAEANTAALQAVLYNRVGDVGLIMCMAWLASTMNTWEIQQISSQDQTPTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLFHNNPTALSLCLCLGALSTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFKAMLFLCSGTIIHSLNGEQDIRKMGGLQKMLPTTTSCMTIGNLALMGTPFLAGFYSKDQIIESLSTSYLNAWALVLTLLATSFTAVYTIRMTLLVQTGYVRIPPLTPMNENNPAVLSSITRLALGSIVAGFLITSYIPPAKTPPMTMPLSIKITALVVTLLGVVLALELSKMTQALILPKQNRFSNFSTTLGYFNPLVHRFISTKLLSGGQNIASHLIDLSWYKLLGPEGLANLQMMASKTATTFHTGLIKAYLGSFALSIFIILLSTY
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11858..13675
location: region:11858-13675:1
so has part: feature:11858-13675:1:exon

YP_009129980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11858-13675:1:exon

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: CYTB
so part of: sequence
location: 13686..14828
location: region:13686-14828:1
so has part: feature:13686-14828:1:exon
subclass of: SO_0000010

24069950
type: Gene
SIO_000068: ncbigene

position:13686:1
position: 13686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14828:1
position: 14828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13686-14828:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MALNLRKNHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLTVQIITGLLLAMHYTADTSLAFTSVAHTCRDVQFGWLIRNLHANGASFFFICIYLHIGRGIYYGSYLNKKTWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWLWGGFSVDNPTLTRFFAFHFILPFVIAGLTLVHLTFLHETGSNNPLGIPSDCDKIPFHPYYSIKDLLGFALMIIPLITLALFSPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLIPFLHVSKQRSMTFRPLSQILFWTLVADLLILTWVGSQPVEHPFIIIGQLASFTYFAIILILFPIVSALENKMLKL
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 13686..14828
location: region:13686-14828:1
so has part: feature:13686-14828:1:exon

YP_009129981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13686-14828:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Thr
so part of: sequence
location: 14832..14900
location: region:14832-14900:1
so has part: feature:14832-14900:1:region

position:14832:1
position: 14832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14900:1
position: 14900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14832-14900:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Pro
so part of: sequence
location: complement(14911..14980)
location: region:14911-14980:-1
so has part: feature:14911-14980:-1:region

position:14911:-1
position: 14911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14980:-1
position: 14980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14911-14980:-1:region

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 134902
gene: ND6
so part of: sequence
location: complement(14990..15511)
location: region:14990-15511:-1
so has part: feature:14990-15511:-1:exon
subclass of: SO_0000010

24069951
type: Gene
SIO_000068: ncbigene

position:14990:-1
position: 14990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15511:-1
position: 15511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14990-15511:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 134902
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MMNFVLFMSLCFVLGGLAVASNPSPYYGVVGLVVASIAGCGWLVSMGVSFISLVLVMVYLGGMLVVFVYSVSLAADPYPESWGDWRVVGYGVGMGLVVVIVGVVTGAFSEVVMGGDTVNNGGLSWIRTDFSGVAMFYSSGSGLLLIAGWGLLLTLFVVLELVRGLSRGAIRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(14990..15511)
location: region:14990-15511:-1
so has part: feature:14990-15511:-1:exon

YP_009129982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14990-15511:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 134902
product: tRNA-Glu
so part of: sequence
location: complement(15513..15584)
location: region:15513-15584:-1
so has part: feature:15513-15584:-1:region

position:15513:-1
position: 15513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15584:-1
position: 15584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15513-15584:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 134902
so part of: sequence
location: 15585..16898
location: region:15585-16898:1
so has part: feature:15585-16898:1:region

position:15585:1
position: 15585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15585-16898:1:region