Vallitalea pronyensis strain FatNI3 chromosome, complete genome.
Bacteria; Bacillota; Clostridia; Eubacteriales; Vallitaleaceae; Vallitalea.
Submitted (01-JUL-2020) Microbiologie Environnementale et Biotechnologie (MEB), Mediterranean Institute of Oceanography (MIO), UMR 7294, 163 avenue de Luminy, Marseille 13288, France
REFSEQ INFORMATION: The reference sequence is identical to\nCP058649.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. JUNE-2020\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: Illumina HiSeq; Oxford Nanopore GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/07/2023 04:57:00\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,297\nCDSs (total) :: 5,219\nGenes (coding) :: 5,193\nCDSs (with protein) :: 5,193\nGenes (RNA) :: 78\nrRNAs :: 6, 6, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 5 (5S, 16S, 23S)\ntRNAs :: 57\nncRNAs :: 4\nPseudo Genes (total) :: 26\nCDSs (without protein) :: 26\nPseudo Genes (ambiguous residues) :: 0 of 26\nPseudo Genes (frameshifted) :: 8 of 26\nPseudo Genes (incomplete) :: 19 of 26\nPseudo Genes (internal stop) :: 2 of 26\nPseudo Genes (multiple problems) :: 3 of 26\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_009587896.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025330.2
fibronectin type III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020814890.1
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF019844.2
GO:0070064 - proline-rich region binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_012059351.1
GO:0016791 - phosphatase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_009289676.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_019679101.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003356423.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008402564.1
COORDINATES: protein motif:HMM:NF015783.2
GO:0009847 - spore germination [Evidence IEA]
COORDINATES: protein motif:HMM:NF015292.2
COORDINATES: protein motif:HMM:TIGR02887.1
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0009847 - spore germination [Evidence IEA]
Ger(x)C family spore germination protein
COORDINATES: similar to AA sequence:RefSeq:WP_010077175.1
COORDINATES: similar to AA sequence:RefSeq:WP_003366795.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003450106.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018431.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006877182.1
COORDINATES: similar to AA sequence:RefSeq:WP_010167037.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004221063.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02865.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: protein motif:HMM:NF021118.2
COORDINATES: similar to AA sequence:RefSeq:WP_008116598.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015529980.1
RNA-binding S4 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008707945.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010246292.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014253700.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF025002.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_006567639.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013656130.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process [Evidence IEA]; GO:0009165 - nucleotide biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003450670.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_013656128.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008720661.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
glucose-1-phosphate adenylyltransferase subunit GlgD
COORDINATES: similar to AA sequence:RefSeq:WP_005609001.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656125.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0045982 - negative regulation of purine nucleobase metabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008977601.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018914.2
COORDINATES: protein motif:HMM:NF005304.0
COORDINATES: protein motif:HMM:NF024880.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF024258.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003530616.1
GO:0003872 - 6-phosphofructokinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008908383.1
COORDINATES: protein motif:HMM:NF039826.1
COORDINATES: protein motif:HMM:NF019322.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014021.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
bifunctional GNAT family N-acetyltransferase/class I SAM-dependent methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012200902.1
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: similar to AA sequence:RefSeq:WP_003371128.1
COORDINATES: similar to AA sequence:RefSeq:WP_002597799.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008977610.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009246877.1
COORDINATES: similar to AA sequence:RefSeq:WP_004620294.1
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012198051.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013272410.1
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: protein motif:HMM:NF020264.2
COORDINATES: protein motif:HMM:NF012613.2
S-layer homology domain-containing protein
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019450.2
COORDINATES: similar to AA sequence:RefSeq:WP_010964886.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015393525.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625877.1
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF033516.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025805.2
COORDINATES: protein motif:HMM:NF024698.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012307.2
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF012632.2
COORDINATES: protein motif:HMM:NF013775.2
GO:0016310 - phosphorylation [Evidence IEA]
aminoglycoside phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016280556.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006860434.1
COORDINATES: similar to AA sequence:RefSeq:WP_005540863.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292873.1
COORDINATES: protein motif:HMM:NF012439.2
COORDINATES: protein motif:HMM:TIGR01144.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013658583.1
COORDINATES: similar to AA sequence:RefSeq:WP_010166755.1
COORDINATES: similar to AA sequence:RefSeq:WP_010166753.1
COORDINATES: protein motif:HMM:NF015834.2
COORDINATES: similar to AA sequence:RefSeq:WP_010166751.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907733.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF025210.2
COORDINATES: similar to AA sequence:RefSeq:WP_010166684.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011971478.1
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008977163.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:NF013607.2
COORDINATES: similar to AA sequence:RefSeq:WP_004221108.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
type II CAAX endopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004058182.1
COORDINATES: protein motif:HMM:NF012907.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF036410.2
COORDINATES: protein motif:HMM:NF014069.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018884.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF039422.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517046.1
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013121277.1
COORDINATES: protein motif:HMM:NF013632.2
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019085.2
pro-sigmaK processing inhibitor BofA family protein
COORDINATES: protein motif:HMM:NF022165.2
COORDINATES: similar to AA sequence:RefSeq:WP_006771188.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008977114.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006856633.1
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: protein motif:HMM:NF024057.2
GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015552975.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037668.1
COORDINATES: similar to AA sequence:RefSeq:WP_007706121.1
COORDINATES: similar to AA sequence:RefSeq:WP_015521786.1
COORDINATES: protein motif:HMM:NF013088.2
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF014704.2
COORDINATES: protein motif:HMM:NF039834.1
COORDINATES: protein motif:HMM:TIGR02095.1
GO:0004373 - glycogen (starch) synthase activity [Evidence IEA]; GO:0009011 - starch synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009891827.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000003398.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358360.1
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]
GO:0019301 - rhamnose catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02627.1
GO:0008993 - rhamnulokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007059280.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014376.2
COORDINATES: protein motif:HMM:NF014851.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012198083.1
COORDINATES: similar to AA sequence:RefSeq:WP_008517252.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_003402828.1
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF013239.2
COORDINATES: protein motif:HMM:NF024808.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012738.2
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009256015.1
COORDINATES: similar to AA sequence:RefSeq:WP_012993490.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0000976 - transcription cis-regulatory region binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF015588.2
COORDINATES: similar to AA sequence:RefSeq:WP_014792542.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: protein motif:HMM:NF017390.2
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: similar to AA sequence:RefSeq:WP_008423690.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014237.2
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909024.1
COORDINATES: similar to AA sequence:RefSeq:WP_010166172.1
COORDINATES: protein motif:HMM:NF015387.2
chitobiase/beta-hexosaminidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010246013.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: protein motif:HMM:TIGR02937.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024743.2
DUF4097 family beta strand repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005950116.1
COORDINATES: protein motif:HMM:NF014844.2
COORDINATES: similar to AA sequence:RefSeq:WP_011879199.1
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF022641.2
COORDINATES: similar to AA sequence:RefSeq:WP_020817132.1
COORDINATES: similar to AA sequence:RefSeq:WP_013486007.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010075041.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013658232.1
COORDINATES: protein motif:HMM:NF024102.2
COORDINATES: similar to AA sequence:RefSeq:WP_004623247.1
COORDINATES: similar to AA sequence:RefSeq:WP_015617708.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: similar to AA sequence:RefSeq:WP_015394464.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008908889.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase carboxyltransferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010298207.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008908887.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003359347.1
COORDINATES: protein motif:HMM:TIGR00531.1
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_008726614.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010966837.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013626075.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007059823.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
enoyl-[acyl-carrier-protein] reductase FabK
COORDINATES: similar to AA sequence:RefSeq:WP_004620396.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010966841.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0033818 - beta-ketoacyl-acyl-carrier-protein synthase III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006776601.1
COORDINATES: protein motif:HMM:NF019618.2
COORDINATES: protein motif:HMM:TIGR00560.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF040001.1
COORDINATES: similar to AA sequence:RefSeq:WP_008397789.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_008402414.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003360620.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: similar to AA sequence:RefSeq:WP_002599862.1
COORDINATES: similar to AA sequence:RefSeq:WP_009256541.1
COORDINATES: protein motif:HMM:NF018305.2
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: protein motif:HMM:NF014893.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: protein motif:HMM:NF014149.2
COORDINATES: similar to AA sequence:RefSeq:WP_003379659.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014900.2
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004627695.1
D-lyxose/D-mannose family sugar isomerase
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF036578.2
COORDINATES: protein motif:HMM:NF012906.2
COORDINATES: protein motif:HMM:NF017745.2
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:TIGR02228.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF036452.2
COORDINATES: protein motif:HMM:NF016119.2
COORDINATES: similar to AA sequence:RefSeq:WP_009253852.1
COORDINATES: similar to AA sequence:RefSeq:WP_009003687.1
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: similar to AA sequence:RefSeq:WP_003363896.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
[FeFe] hydrogenase H-cluster radical SAM maturase HydG
COORDINATES: similar to AA sequence:RefSeq:WP_013625808.1
COORDINATES: similar to AA sequence:RefSeq:WP_007287111.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009291031.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002605672.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658654.1
COORDINATES: similar to AA sequence:RefSeq:WP_012201902.1
nucleoside recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003429584.1
COORDINATES: similar to AA sequence:RefSeq:WP_003370474.1
GO:0003941 - L-serine ammonia-lyase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006565 - L-serine catabolic process [Evidence IEA]
L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009445309.1
L-serine ammonia-lyase, iron-sulfur-dependent subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_006565797.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008707974.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002605447.1
GO:0008170 - N-methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016430 - tRNA (adenine-N6-)-methyltransferase activity [Evidence IEA]
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002594182.1
COORDINATES: protein motif:HMM:TIGR00678.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012744029.1
COORDINATES: similar to AA sequence:RefSeq:WP_020813755.1
COORDINATES: similar to AA sequence:RefSeq:WP_004852590.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:NF013444.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013272366.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018592035.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517334.1
COORDINATES: protein motif:HMM:NF014647.2
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011967542.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016293276.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_006857736.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016293117.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_009247052.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007705119.1
COORDINATES: similar to AA sequence:RefSeq:WP_013655065.1
COORDINATES: similar to AA sequence:RefSeq:WP_002569306.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_011641943.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013976905.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014263194.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:TIGR03592.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: similar to AA sequence:RefSeq:WP_006857741.1
GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051510 - regulation of unidimensional cell growth [Evidence IEA]
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: similar to AA sequence:RefSeq:WP_006857742.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_013274842.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_008371371.1
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_013659205.1
GO:0032466 - negative regulation of cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:TIGR00912.1
COORDINATES: similar to AA sequence:RefSeq:WP_003513369.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00551.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015360337.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF017221.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012201930.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035274.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016439422.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004613273.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF025935.2
COORDINATES: protein motif:HMM:NF015643.2
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658821.1
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005344001.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004455219.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_003363535.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: protein motif:HMM:NF024399.2
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: similar to AA sequence:RefSeq:WP_002579729.1
GO:0004518 - nuclease activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0009650 - UV protection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003468901.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016830 - carbon-carbon lyase activity [Evidence IEA]
GO:0006290 - pyrimidine dimer repair [Evidence IEA]; GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020044.2
SNF2 helicase associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015926589.1
GO:0008801 - beta-phosphoglucomutase activity [Evidence IEA]
GO:0046352 - disaccharide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013624128.1
COORDINATES: similar to AA sequence:RefSeq:WP_014828829.1
CAP-associated domain-containing protein
COORDINATES: protein motif:HMM:NF012955.2
GO:0046983 - protein dimerization activity [Evidence IEA]
alkyl sulfatase dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013240463.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018211759.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF024157.2
COORDINATES: protein motif:HMM:NF012449.2
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: similar to AA sequence:RefSeq:WP_018086225.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: similar to AA sequence:RefSeq:WP_006352888.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018086227.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_006567595.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_013655746.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013740.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013069.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010167048.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008394397.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003444535.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: similar to AA sequence:RefSeq:WP_011099120.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008718310.1
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003250911.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013296.2
COORDINATES: similar to AA sequence:RefSeq:WP_008908918.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015615001.1
COORDINATES: similar to AA sequence:RefSeq:WP_012425289.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009290213.1
COORDINATES: similar to AA sequence:RefSeq:WP_018595111.1
COORDINATES: protein motif:HMM:NF003300.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014826416.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461101.1
COORDINATES: similar to AA sequence:RefSeq:WP_006570993.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004765 - shikimate kinase activity [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033594.2
COORDINATES: similar to AA sequence:RefSeq:WP_008981659.1
COORDINATES: similar to AA sequence:RefSeq:WP_020072396.1
COORDINATES: protein motif:HMM:NF025015.2
COORDINATES: protein motif:HMM:NF012742.2
COORDINATES: similar to AA sequence:RefSeq:WP_012200321.1
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: similar to AA sequence:RefSeq:WP_013279711.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358812.1
COORDINATES: protein motif:HMM:NF028479.2
COORDINATES: protein motif:HMM:NF016764.2
GO:0031267 - small GTPase binding [Evidence IEA]
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF039504.1
COORDINATES: similar to AA sequence:RefSeq:WP_013496855.1
COORDINATES: protein motif:HMM:NF013429.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013270797.1
GO:0008150 - biological_process [Evidence IEA]
TIGR03905 family TSCPD domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013656088.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]; GO:0009164 - nucleoside catabolic process [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
5'-methylthioadenosine/adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_018595119.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018595120.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013209.2
COORDINATES: similar to AA sequence:RefSeq:WP_009255848.1
COORDINATES: protein motif:HMM:NF000355.3
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015360187.1
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:TIGR03915.1
TIGR03915 family putative DNA repair protein
COORDINATES: similar to AA sequence:RefSeq:WP_015617213.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064483.1
GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]
GO:0072488 - ammonium transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017415469.1
COORDINATES: protein motif:HMM:NF013560.2
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008241 - peptidyl-dipeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01831
THF riboswitches regulate genes encoding folate transporters and folate metabolism; They are most commonly found in Clostridiales and Lactobacillales; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_015616847.1
COORDINATES: protein motif:HMM:NF024201.2
anti-sigma factor domain-containing protein
COORDINATES: protein motif:HMM:NF012308.2
COORDINATES: protein motif:HMM:NF024593.2
COORDINATES: similar to AA sequence:RefSeq:WP_010168054.1
COORDINATES: protein motif:HMM:NF021619.2
signal recognition particle sRNA large type
COORDINATES: nucleotide motif:Rfam:14.4:RF01854
COORDINATES: similar to AA sequence:RefSeq:WP_004613011.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009254785.1
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: protein motif:HMM:NF024716.2
COORDINATES: similar to AA sequence:RefSeq:WP_013976870.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909175.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012741253.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_008977554.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF016163.2
COORDINATES: similar to AA sequence:RefSeq:WP_008720690.1
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF025390.2
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014354671.1
COORDINATES: similar to AA sequence:RefSeq:WP_014903284.1
COORDINATES: similar to AA sequence:RefSeq:WP_007287223.1
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: similar to AA sequence:RefSeq:WP_012344306.1
COORDINATES: similar to AA sequence:RefSeq:WP_006855869.1
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007064620.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF040034.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356849.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF014604.2
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_004619190.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656109.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_008676336.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015925839.1
COORDINATES: similar to AA sequence:RefSeq:WP_016280599.1
COORDINATES: similar to AA sequence:RefSeq:WP_003366805.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656115.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012298.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: similar to AA sequence:RefSeq:WP_010246609.1
COORDINATES: similar to AA sequence:RefSeq:WP_003513281.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516452.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246602.1
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF014132.2
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005337494.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009461818.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011099122.1
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016209108.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004335 - galactokinase activity [Evidence IEA]
GO:0046835 - carbohydrate phosphorylation [Evidence IEA]; GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011590121.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005210893.1
GO:0017103 - UTP:galactose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0019388 - galactose catabolic process [Evidence IEA]
UDP-glucose--hexose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:NF020730.2
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_010167742.1
COORDINATES: similar to AA sequence:RefSeq:WP_016360102.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0019277 - UDP-N-acetylgalactosamine biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010966801.1
GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_007785850.1
COORDINATES: protein motif:HMM:NF016430.2
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF019886.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: protein motif:HMM:NF024087.2
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF015531.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: similar to AA sequence:RefSeq:WP_002579374.1
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160575.1
COORDINATES: protein motif:HMM:NF025879.2
effector binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00976.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015544568.1
COORDINATES: protein motif:HMM:NF015679.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064774.1
COORDINATES: protein motif:HMM:NF024950.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF015338.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: protein motif:HMM:NF016296.2
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006716459.1
COORDINATES: similar to AA sequence:RefSeq:WP_006716460.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024569.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014312743.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]; GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009243052.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_017209073.1
GO:0080135 - regulation of cellular response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: similar to AA sequence:RefSeq:WP_012159653.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360251.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360252.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
glycine betaine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007591839.1
COORDINATES: protein motif:HMM:NF025025.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: protein motif:HMM:NF039639.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198093.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013134.2
COORDINATES: similar to AA sequence:RefSeq:WP_014519566.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005210341.1
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: similar to AA sequence:RefSeq:WP_010074202.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158519.1
COORDINATES: protein motif:HMM:NF020571.2
COORDINATES: similar to AA sequence:RefSeq:WP_013360755.1
COORDINATES: similar to AA sequence:RefSeq:WP_010294905.1
COORDINATES: similar to AA sequence:RefSeq:WP_016297487.1
COORDINATES: protein motif:HMM:TIGR00218.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020814840.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02906.1
COORDINATES: protein motif:HMM:NF024220.2
COORDINATES: protein motif:HMM:NF013661.2
COORDINATES: protein motif:HMM:NF024299.2
COORDINATES: similar to AA sequence:RefSeq:WP_002584563.1
COORDINATES: similar to AA sequence:RefSeq:WP_002584562.1
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: similar to AA sequence:RefSeq:WP_004629162.1
COORDINATES: protein motif:HMM:NF013491.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008514816.1
COORDINATES: similar to AA sequence:RefSeq:WP_006566001.1
COORDINATES: similar to AA sequence:RefSeq:WP_003422792.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: similar to AA sequence:RefSeq:WP_004613033.1
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]
COORDINATES: protein motif:HMM:NF025701.2
protease complex subunit PrcB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012634475.1
COORDINATES: protein motif:HMM:NF024085.2
COORDINATES: similar to AA sequence:RefSeq:WP_015513636.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_012738434.1
COORDINATES: similar to AA sequence:RefSeq:WP_014792441.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513638.1
COORDINATES: protein motif:HMM:TIGR02837.1
COORDINATES: similar to AA sequence:RefSeq:WP_012201786.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
D-alanine--D-alanine ligase family protein
COORDINATES: protein motif:HMM:NF020711.2
COORDINATES: similar to AA sequence:RefSeq:WP_016288198.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: protein motif:HMM:NF025854.2
COORDINATES: protein motif:HMM:NF016526.2
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656082.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025160.2
COORDINATES: similar to AA sequence:RefSeq:WP_015525354.1
COORDINATES: protein motif:HMM:TIGR00530.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004607857.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF025559.2
L-2-amino-thiazoline-4-carboxylic acid hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_008977079.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013237634.1
COORDINATES: similar to AA sequence:RefSeq:WP_003495023.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_014254343.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF017368.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013273516.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: protein motif:HMM:NF017496.2
COORDINATES: protein motif:HMM:TIGR02870.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014519662.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013379789.1
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: similar to AA sequence:RefSeq:WP_008976841.1
GO:0140110 - transcription regulator activity [Evidence IEA]
sporulation transcriptional regulator SpoIIID
COORDINATES: similar to AA sequence:RefSeq:WP_012198272.1
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: similar to AA sequence:RefSeq:WP_003512930.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: protein motif:HMM:NF018410.2
COORDINATES: similar to AA sequence:RefSeq:WP_012634541.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005947146.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039185.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292078.1
COORDINATES: protein motif:HMM:TIGR03824.1
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:NF016985.2
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
COORDINATES: protein motif:HMM:NF014660.2
COORDINATES: similar to AA sequence:RefSeq:WP_006857370.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013237628.1
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: protein motif:HMM:NF018852.2
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003513620.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062009.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013271142.1
COORDINATES: similar to AA sequence:RefSeq:WP_004842372.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008401095.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_003502679.1
COORDINATES: similar to AA sequence:RefSeq:WP_003515020.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00557
ribosomal protein L10 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009249516.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003502689.1
COORDINATES: similar to AA sequence:RefSeq:WP_005947825.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_003022223.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_017417212.1
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018596937.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274355.1
COORDINATES: similar to AA sequence:RefSeq:WP_004037243.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006568224.1
COORDINATES: similar to AA sequence:RefSeq:WP_009532646.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034787.1
COORDINATES: similar to AA sequence:RefSeq:WP_012741328.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009267282.1
COORDINATES: similar to AA sequence:RefSeq:WP_015544470.1
COORDINATES: similar to AA sequence:RefSeq:WP_009461327.1
COORDINATES: similar to AA sequence:RefSeq:WP_009267279.1
COORDINATES: similar to AA sequence:RefSeq:WP_018597899.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019162497.1
COORDINATES: similar to AA sequence:RefSeq:WP_019162496.1
COORDINATES: similar to AA sequence:RefSeq:WP_009243086.1
COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1
COORDINATES: similar to AA sequence:RefSeq:WP_004611893.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274328.1
COORDINATES: similar to AA sequence:RefSeq:WP_008752089.1
COORDINATES: similar to AA sequence:RefSeq:WP_015553834.1
COORDINATES: similar to AA sequence:RefSeq:WP_008372550.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002604688.1
COORDINATES: similar to AA sequence:RefSeq:WP_004607282.1
COORDINATES: similar to AA sequence:RefSeq:WP_018597911.1
COORDINATES: similar to AA sequence:RefSeq:WP_004074878.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357193.1
COORDINATES: similar to AA sequence:RefSeq:WP_005332354.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008396306.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003514668.1
KOW domain-containing RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012201639.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_016285758.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012201636.1
COORDINATES: similar to AA sequence:RefSeq:WP_015924326.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016285760.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006568513.1
COORDINATES: similar to AA sequence:RefSeq:WP_005335990.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_016205873.1
COORDINATES: similar to AA sequence:RefSeq:WP_004614875.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_005362164.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019522.2
COORDINATES: similar to AA sequence:RefSeq:WP_012201623.1
COORDINATES: similar to AA sequence:RefSeq:WP_012743748.1
COORDINATES: protein motif:HMM:NF025628.2
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019278423.1
COORDINATES: protein motif:HMM:NF025644.2
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_016441362.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006855573.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966063.1
COORDINATES: similar to AA sequence:RefSeq:WP_010236875.1
COORDINATES: similar to AA sequence:RefSeq:WP_002588174.1
GO:0016853 - isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010236871.1
COORDINATES: similar to AA sequence:RefSeq:WP_004849959.1
COORDINATES: similar to AA sequence:RefSeq:WP_003447820.1
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_003465637.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908023.1
COORDINATES: similar to AA sequence:RefSeq:WP_013725168.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012797.2
GO:0008173 - RNA methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0001510 - RNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: similar to AA sequence:RefSeq:WP_009461498.1
COORDINATES: similar to AA sequence:RefSeq:WP_006443305.1
GO:0045121 - membrane raft [Evidence IEA]
GO:0034982 - mitochondrial protein processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF018613.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00374.1
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016359806.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF028272.2
putative ABC exporter domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015360163.1
COORDINATES: similar to AA sequence:RefSeq:WP_015567896.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008976889.1
COORDINATES: protein motif:HMM:NF019491.2
COORDINATES: protein motif:HMM:NF024231.2
COORDINATES: similar to AA sequence:RefSeq:WP_012198454.1
COORDINATES: similar to AA sequence:RefSeq:WP_004035640.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006779928.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002600588.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013704.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011148688.1
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: similar to AA sequence:RefSeq:WP_015357857.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024598.2
COORDINATES: similar to AA sequence:RefSeq:WP_008394155.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: similar to AA sequence:RefSeq:WP_005604006.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_035111559.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_002570051.1
COORDINATES: similar to AA sequence:RefSeq:WP_004612104.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013256.2
COORDINATES: protein motif:HMM:NF037393.2
COORDINATES: similar to AA sequence:RefSeq:WP_004845869.1
COORDINATES: protein motif:HMM:NF014126.2
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015586.2
COORDINATES: similar to AA sequence:RefSeq:WP_009254223.1
COORDINATES: similar to AA sequence:RefSeq:WP_006855775.1
COORDINATES: protein motif:HMM:NF023435.2
COORDINATES: similar to AA sequence:RefSeq:WP_015357965.1
COORDINATES: protein motif:HMM:NF013381.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
uroporphyrinogen decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003358190.1
COORDINATES: similar to AA sequence:RefSeq:WP_009253419.1
COORDINATES: similar to AA sequence:RefSeq:WP_008721431.1
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: similar to AA sequence:RefSeq:WP_008908039.1
GO:0020037 - heme binding [Evidence IEA]
heme NO-binding domain-containing protein
COORDINATES: protein motif:HMM:NF019323.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491356.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413785.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014253542.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003517480.1
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009255615.1
ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_011948038.1
COORDINATES: similar to AA sequence:RefSeq:WP_017753032.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005355409.1
GO:0008736 - L-fucose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019317 - fucose catabolic process [Evidence IEA]; GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003518072.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010963415.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF013100.2
GO:0008800 - beta-lactamase activity [Evidence IEA]
GO:0030655 - beta-lactam antibiotic catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_012159031.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009255930.1
COORDINATES: protein motif:HMM:NF015971.2
COORDINATES: protein motif:HMM:NF037701.2
COORDINATES: protein motif:HMM:NF016338.2
COORDINATES: protein motif:HMM:NF017686.2
GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]
GO:0008218 - bioluminescence [Evidence IEA]
COORDINATES: protein motif:HMM:NF025115.2
DUF3298 and DUF4163 domain-containing protein
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:NF015461.2
GO:0005576 - extracellular region [Evidence IEA]
COORDINATES: protein motif:HMM:NF026935.2
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014256627.1
copper amine oxidase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015529313.1
COORDINATES: protein motif:HMM:NF020916.2
polyphosphate polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003432163.1
COORDINATES: protein motif:HMM:NF020337.2
COORDINATES: protein motif:HMM:NF033457.1
COORDINATES: protein motif:HMM:NF016615.2
COORDINATES: protein motif:HMM:NF017000.2
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:NF002956.0
COORDINATES: protein motif:HMM:NF015927.2
COORDINATES: protein motif:HMM:NF025158.2
COORDINATES: protein motif:HMM:NF022182.2
COORDINATES: protein motif:HMM:NF015945.2
COORDINATES: protein motif:HMM:NF026229.2
COORDINATES: protein motif:HMM:NF018449.2
COORDINATES: similar to AA sequence:RefSeq:WP_004841541.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011641180.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011099284.1
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020815358.1
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020815771.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007429757.1
saccharopine dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014314459.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0008216 - spermidine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: similar to AA sequence:RefSeq:WP_015043876.1
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF008277.0
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IEA]
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_013726234.1
COORDINATES: similar to AA sequence:RefSeq:WP_017416088.1
COORDINATES: protein motif:HMM:NF018406.2
COORDINATES: similar to AA sequence:RefSeq:WP_009268146.1
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF012340.2
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_011987493.1
COORDINATES: protein motif:HMM:NF024772.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF018685.2
COORDINATES: similar to AA sequence:RefSeq:WP_003367165.1
COORDINATES: similar to AA sequence:RefSeq:WP_013822648.1
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013274808.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014314844.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: protein motif:HMM:NF028512.2
COORDINATES: protein motif:HMM:NF013736.2
N-acetylmuramoyl-L-alanine amidase family protein
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: similar to AA sequence:RefSeq:WP_003512267.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008976673.1
COORDINATES: protein motif:HMM:TIGR00040.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008976540.1
COORDINATES: protein motif:HMM:NF024438.2
COORDINATES: protein motif:HMM:NF012706.2
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_009533493.1
COORDINATES: similar to AA sequence:RefSeq:WP_005932252.1
COORDINATES: similar to AA sequence:RefSeq:WP_008120267.1
alpha/beta-type small acid-soluble spore protein
COORDINATES: similar to AA sequence:RefSeq:WP_002595547.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006426214.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_008400600.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_006864161.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019160792.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:NF025635.2
COORDINATES: similar to AA sequence:RefSeq:WP_018594203.1
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002581355.1
autorepressor SdpR family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_013656079.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013809434.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025059.2
COORDINATES: similar to AA sequence:RefSeq:WP_003447686.1
GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019315.2
COORDINATES: similar to AA sequence:RefSeq:WP_012104170.1
COORDINATES: protein motif:HMM:NF012551.2
COORDINATES: similar to AA sequence:RefSeq:WP_014311909.1
COORDINATES: similar to AA sequence:RefSeq:WP_006778176.1
COORDINATES: similar to AA sequence:RefSeq:WP_015925086.1
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]; GO:0046417 - chorismate metabolic process [Evidence IEA]
bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_019161066.1
GO:0016852 - sirohydrochlorin cobaltochelatase activity [Evidence IEA]
GO:0019251 - anaerobic cobalamin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: similar to AA sequence:RefSeq:WP_013823281.1
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_012158197.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158198.1
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017352761.1
COORDINATES: protein motif:HMM:TIGR01467.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: protein motif:HMM:TIGR00312.2
cobalt-precorrin-5B (C(1))-methyltransferase CbiD
COORDINATES: protein motif:HMM:TIGR02467.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: protein motif:HMM:NF013315.2
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: similar to AA sequence:RefSeq:WP_011948631.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: similar to AA sequence:RefSeq:WP_002846187.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00715.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019225686.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360985.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253545.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250938.1
COORDINATES: similar to AA sequence:RefSeq:WP_009246261.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158209.1
COORDINATES: similar to AA sequence:RefSeq:WP_014119449.1
COORDINATES: similar to AA sequence:RefSeq:WP_009081575.1
COORDINATES: similar to AA sequence:RefSeq:WP_015926059.1
COORDINATES: similar to AA sequence:RefSeq:WP_016297518.1
COORDINATES: similar to AA sequence:RefSeq:WP_009890797.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:NF022188.2
Rossmann-like and DUF2520 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013174340.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014255298.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011928302.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00035.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012200769.1
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF033641.1
COORDINATES: similar to AA sequence:RefSeq:WP_008908663.1
COORDINATES: protein motif:HMM:TIGR01194.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:1904680 - peptide transmembrane transporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020814290.1
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:TIGR01733.1
amino acid adenylation domain-containing protein
COORDINATES: protein motif:HMM:NF014589.2
carbamoyltransferase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:NF013228.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: protein motif:HMM:NF025757.2
BtrH N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01426.1
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003374178.1
COORDINATES: protein motif:HMM:NF012337.2
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
beta-ketoacyl synthase N-terminal-like domain-containing protein
2-hydroxyacyl-CoA dehydratase family protein
COORDINATES: protein motif:HMM:NF017828.2
COORDINATES: protein motif:HMM:TIGR00241.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012596.2
enoyl-CoA hydratase/isomerase family protein
COORDINATES: protein motif:HMM:NF009466.0
COORDINATES: protein motif:HMM:NF023568.2
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF024135.2
COORDINATES: protein motif:HMM:TIGR01930.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0006635 - fatty acid beta-oxidation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019589.2
3-hydroxyacyl-ACP dehydratase FabZ family protein
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF015400.2
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: protein motif:HMM:NF019959.2
COORDINATES: similar to AA sequence:RefSeq:WP_013779324.1
COORDINATES: similar to AA sequence:RefSeq:WP_014184997.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413788.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360873.1
GO:0003924 - GTPase activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014903994.1
COORDINATES: similar to AA sequence:RefSeq:WP_010965557.1
COORDINATES: similar to AA sequence:RefSeq:WP_018214137.1
methyltransferase MtaB domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010075610.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF013200.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: protein motif:HMM:NF028171.2
COORDINATES: similar to AA sequence:RefSeq:WP_004619563.1
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010073958.1
COORDINATES: similar to AA sequence:RefSeq:WP_013484226.1
COORDINATES: protein motif:HMM:NF012901.2
acyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF013166.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF012796.2
COORDINATES: similar to AA sequence:RefSeq:WP_003519073.1
COORDINATES: similar to AA sequence:RefSeq:WP_011948231.1
COORDINATES: similar to AA sequence:RefSeq:WP_008518647.1
GO:0005504 - fatty acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013760.2
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019279453.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018212045.1
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_005351895.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005603946.1
COORDINATES: similar to AA sequence:RefSeq:WP_008400610.1
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006565623.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012753.2
GO:0030234 - enzyme regulator activity [Evidence IEA]
GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065241.1
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065240.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009903827.1
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
carbamoyl phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012065238.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013362610.1
COORDINATES: similar to AA sequence:RefSeq:WP_009264466.1
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012200301.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010963356.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_008412892.1
flotillin-like protein involved in membrane lipid rafts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014254614.1
COORDINATES: similar to AA sequence:RefSeq:WP_009461037.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003022661.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011879339.1
COORDINATES: similar to AA sequence:RefSeq:WP_013174376.1
GO:0016740 - transferase activity [Evidence IEA]
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF009402.0
COORDINATES: protein motif:HMM:NF014732.2
Wzz/FepE/Etk N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009621914.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004715 - non-membrane spanning protein tyrosine kinase activity [Evidence IEA]; GO:0004713 - protein tyrosine kinase activity [Evidence IEA]
CpsD/CapB family tyrosine-protein kinase
COORDINATES: similar to AA sequence:RefSeq:WP_010681355.1
COORDINATES: similar to AA sequence:RefSeq:WP_013381000.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003506376.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF012360.2
GO:0016746 - acyltransferase activity [Evidence IEA]; GO:0120225 - coenzyme A binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF026018.2
polysaccharide biosynthesis C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002596825.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_003504275.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01499.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008841 - dihydrofolate synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007886736.1
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_012159648.1
GO:0045152 - antisigma factor binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159647.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198509.1
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
RNA polymerase sporulation sigma factor SigF
COORDINATES: protein motif:HMM:NF023586.2
COORDINATES: similar to AA sequence:RefSeq:WP_007864051.1
COORDINATES: similar to AA sequence:RefSeq:WP_018592099.1
COORDINATES: similar to AA sequence:RefSeq:WP_011100387.1
COORDINATES: similar to AA sequence:RefSeq:WP_003451074.1
COORDINATES: protein motif:HMM:TIGR02074.1
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015613678.1
COORDINATES: protein motif:HMM:TIGR02832.1
COORDINATES: similar to AA sequence:RefSeq:WP_004621325.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020074306.1
COORDINATES: protein motif:HMM:NF025925.2
COORDINATES: similar to AA sequence:RefSeq:WP_009002848.1
COORDINATES: similar to AA sequence:RefSeq:WP_010166399.1
COORDINATES: similar to AA sequence:RefSeq:WP_009002850.1
PocR ligand-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009003684.1
COORDINATES: similar to AA sequence:RefSeq:WP_009001714.1
COORDINATES: similar to AA sequence:RefSeq:WP_013821663.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394491.1
COORDINATES: protein motif:HMM:NF039477.1
COORDINATES: protein motif:HMM:TIGR00545.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034200.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244191.1
COORDINATES: similar to AA sequence:RefSeq:WP_013626085.1
GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0019430 - removal of superoxide radicals [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003358705.1
COORDINATES: protein motif:HMM:NF013799.2
ectonucleotide pyrophosphatase/phosphodiesterase
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF014669.2
GO:0015225 - biotin transmembrane transporter activity [Evidence IEA]
GO:0015878 - biotin transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013524.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009254535.1
COORDINATES: similar to AA sequence:RefSeq:WP_009891918.1
COORDINATES: similar to AA sequence:RefSeq:WP_004614050.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_015617970.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024214.2
GO:0005525 - GTP binding [Evidence IEA]; GO:0061603 - molybdenum cofactor guanylyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00129.1
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_012159904.1
COORDINATES: similar to AA sequence:RefSeq:WP_003443578.1
COORDINATES: similar to AA sequence:RefSeq:WP_003520743.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006353431.1
GO:0046914 - transition metal ion binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010251904.1
GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0046914 - transition metal ion binding [Evidence IEA]
iron dependent repressor, metal binding and dimerization domain protein
COORDINATES: similar to AA sequence:RefSeq:WP_012739814.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013657932.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003446839.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF040162.1
COORDINATES: similar to AA sequence:RefSeq:WP_008980323.1
COORDINATES: protein motif:HMM:NF002759.0
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017414297.1
COORDINATES: similar to AA sequence:RefSeq:WP_015512894.1
COORDINATES: similar to AA sequence:RefSeq:WP_008117821.1
spermidine/putrescine ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012464.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015530770.1
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010245066.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021981.2
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008975254.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015889.2
GO:0015661 - L-lysine efflux transmembrane transporter activity [Evidence IEA]
GO:1903401 - L-lysine transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003543271.1
COORDINATES: similar to AA sequence:RefSeq:WP_005613100.1
COORDINATES: similar to AA sequence:RefSeq:WP_007790013.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014471.2
COORDINATES: similar to AA sequence:RefSeq:WP_009757293.1
COORDINATES: similar to AA sequence:RefSeq:WP_004607703.1
COORDINATES: similar to AA sequence:RefSeq:WP_009757292.1
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: similar to AA sequence:RefSeq:WP_009262757.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009299164.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: protein motif:HMM:NF033517.1
COORDINATES: similar to AA sequence:RefSeq:WP_003513861.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR01643.1
COORDINATES: similar to AA sequence:RefSeq:WP_019162159.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: protein motif:HMM:NF024706.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024361.2
COORDINATES: protein motif:HMM:TIGR02840.1
COORDINATES: protein motif:HMM:TIGR00367.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009526758.1
COORDINATES: protein motif:HMM:NF025687.2
COORDINATES: similar to AA sequence:RefSeq:WP_020493021.1
COORDINATES: protein motif:HMM:NF013126.2
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006856796.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015559136.1
COORDINATES: similar to AA sequence:RefSeq:WP_010166786.1
GO:0004559 - alpha-mannosidase activity [Evidence IEA]
GO:0006013 - mannose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014375.2
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog.; Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016726.2
COORDINATES: similar to AA sequence:RefSeq:WP_007048098.1
COORDINATES: protein motif:HMM:NF023134.2
CGNR zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF040334.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF012257.2
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016441114.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004079871.1
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: protein motif:HMM:NF015567.2
COORDINATES: similar to AA sequence:RefSeq:WP_007718503.1
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
PTS lactose/cellobiose transporter subunit IIA
COORDINATES: protein motif:HMM:NF014437.2
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014368.2
COORDINATES: similar to AA sequence:RefSeq:WP_010964061.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008410405.1
COORDINATES: similar to AA sequence:RefSeq:WP_016207327.1
COORDINATES: similar to AA sequence:RefSeq:WP_003447092.1
COORDINATES: protein motif:HMM:NF033679.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation:proton antiporter-2 (CPA2) family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010168784.1
COORDINATES: similar to AA sequence:RefSeq:WP_009255670.1
COORDINATES: protein motif:HMM:NF024120.2
COORDINATES: protein motif:HMM:NF037653.2
COORDINATES: protein motif:HMM:NF012516.2
GO:0004650 - polygalacturonase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027232.2
COORDINATES: similar to AA sequence:RefSeq:WP_009002574.1
COORDINATES: similar to AA sequence:RefSeq:WP_016360125.1
COORDINATES: similar to AA sequence:RefSeq:WP_009250616.1
COORDINATES: protein motif:HMM:NF019556.2
COORDINATES: similar to AA sequence:RefSeq:WP_009003700.1
COORDINATES: similar to AA sequence:RefSeq:WP_009251028.1
COORDINATES: similar to AA sequence:RefSeq:WP_015924534.1
COORDINATES: protein motif:HMM:NF014850.2
COORDINATES: similar to AA sequence:RefSeq:WP_015390406.1
GO:0004560 - alpha-L-fucosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005364273.1
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015358984.1
COORDINATES: protein motif:HMM:NF018877.2
COORDINATES: similar to AA sequence:RefSeq:WP_009257161.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_013485552.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002843866.1
COORDINATES: similar to AA sequence:RefSeq:WP_004444627.1
COORDINATES: similar to AA sequence:RefSeq:WP_009246484.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246702.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246701.1
COORDINATES: protein motif:HMM:NF021788.2
COORDINATES: similar to AA sequence:RefSeq:WP_004608030.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:TIGR01350.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004625740.1
COORDINATES: similar to AA sequence:RefSeq:WP_012705767.1
COORDINATES: similar to AA sequence:RefSeq:WP_012344573.1
COORDINATES: protein motif:HMM:NF013077.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016657 - oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008719061.1
GO:0008927 - mannonate dehydratase activity [Evidence IEA]
GO:0006064 - glucuronate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_002568190.1
COORDINATES: similar to AA sequence:RefSeq:WP_002565055.1
COORDINATES: protein motif:HMM:NF019413.2
COORDINATES: similar to AA sequence:RefSeq:WP_009003022.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059109.1
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: similar to AA sequence:RefSeq:WP_015617179.1
COORDINATES: similar to AA sequence:RefSeq:WP_008116808.1
COORDINATES: similar to AA sequence:RefSeq:WP_004454983.1
COORDINATES: protein motif:HMM:TIGR03729.1
COORDINATES: similar to AA sequence:RefSeq:WP_009163827.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007705624.1
COORDINATES: similar to AA sequence:RefSeq:WP_002576034.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016360196.1
COORDINATES: similar to AA sequence:RefSeq:WP_015360330.1
COORDINATES: similar to AA sequence:RefSeq:WP_008722782.1
COORDINATES: similar to AA sequence:RefSeq:WP_009003725.1
COORDINATES: similar to AA sequence:RefSeq:WP_009003726.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_009250617.1
COORDINATES: similar to AA sequence:RefSeq:WP_009251027.1
COORDINATES: similar to AA sequence:RefSeq:WP_009170269.1
COORDINATES: protein motif:HMM:NF014502.2
COORDINATES: protein motif:HMM:NF024771.2
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: similar to AA sequence:RefSeq:WP_016324369.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_015552960.1
COORDINATES: protein motif:HMM:NF012925.2
COORDINATES: protein motif:HMM:NF027900.2
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF016497.2
COORDINATES: similar to AA sequence:RefSeq:WP_015358896.1
COORDINATES: similar to AA sequence:RefSeq:WP_002601167.1
COORDINATES: protein motif:HMM:NF014348.2
chondroitinase family polysaccharide lyase
COORDINATES: similar to AA sequence:RefSeq:WP_010168442.1
COORDINATES: similar to AA sequence:RefSeq:WP_002603839.1
COORDINATES: similar to AA sequence:RefSeq:WP_009169677.1
COORDINATES: similar to AA sequence:RefSeq:WP_010168465.1
COORDINATES: similar to AA sequence:RefSeq:WP_009253356.1
COORDINATES: similar to AA sequence:RefSeq:WP_010167137.1
COORDINATES: protein motif:HMM:NF024627.2
COORDINATES: similar to AA sequence:RefSeq:WP_003366692.1
COORDINATES: protein motif:HMM:NF015366.2
GO:0042597 - periplasmic space [Evidence IEA]
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: protein motif:HMM:NF018979.2
tripartite tricarboxylate transporter TctB family protein
COORDINATES: protein motif:HMM:NF014073.2
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_003461512.1
GO:0035460 - L-ascorbate 6-phosphate lactonase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019854 - L-ascorbic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006782150.1
COORDINATES: similar to AA sequence:RefSeq:WP_012992716.1
COORDINATES: similar to AA sequence:RefSeq:WP_006567410.1
transketolase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013030.2
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015944134.1
triose-phosphate isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002566081.1
GO:0050043 - lactate racemase activity [Evidence IEA]
lactate racemase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019849976.1
energy-coupling factor ABC transporter permease
COORDINATES: protein motif:HMM:NF014420.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003542220.1
COORDINATES: similar to AA sequence:RefSeq:WP_009169296.1
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: similar to AA sequence:RefSeq:WP_010964093.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: similar to AA sequence:RefSeq:WP_017212519.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:NF015729.2
COORDINATES: protein motif:HMM:NF016088.2
COORDINATES: similar to AA sequence:RefSeq:WP_003366741.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0008888 - glycerol dehydrogenase [NAD+] activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000720710.1
GO:0004371 - glycerone kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF041464.1
COORDINATES: similar to AA sequence:RefSeq:WP_019679677.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_013360324.1
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: protein motif:HMM:NF025589.2
COORDINATES: similar to AA sequence:RefSeq:WP_015358811.1
COORDINATES: similar to AA sequence:RefSeq:WP_010167831.1
COORDINATES: protein motif:HMM:NF013595.2
COORDINATES: similar to AA sequence:RefSeq:WP_006775177.1
COORDINATES: similar to AA sequence:RefSeq:WP_016359859.1
COORDINATES: similar to AA sequence:RefSeq:WP_009250611.1
COORDINATES: protein motif:HMM:NF013300.2
COORDINATES: protein motif:HMM:NF018190.2
COORDINATES: protein motif:HMM:NF014156.2
COORDINATES: similar to AA sequence:RefSeq:WP_012199142.1
COORDINATES: similar to AA sequence:RefSeq:WP_009324880.1
COORDINATES: similar to AA sequence:RefSeq:WP_012199144.1
COORDINATES: similar to AA sequence:RefSeq:WP_012199145.1
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009254 - peptidoglycan turnover [Evidence IEA]
N-acetylmuramic acid 6-phosphate etherase
COORDINATES: similar to AA sequence:RefSeq:WP_012199148.1
COORDINATES: protein motif:HMM:NF013986.2
BadF/BadG/BcrA/BcrD ATPase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012199151.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_013657661.1
COORDINATES: similar to AA sequence:RefSeq:WP_019226275.1
COORDINATES: protein motif:HMM:NF038196.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013656368.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656369.1
COORDINATES: similar to AA sequence:RefSeq:WP_010244126.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012401.2
COORDINATES: similar to AA sequence:RefSeq:WP_013380655.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein MobB
COORDINATES: similar to AA sequence:RefSeq:WP_014254868.1
COORDINATES: protein motif:HMM:NF024952.2
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF022431.2
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_014253448.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246548.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246552.1
COORDINATES: similar to AA sequence:RefSeq:WP_010246555.1
COORDINATES: protein motif:HMM:NF024973.2
COORDINATES: similar to AA sequence:RefSeq:WP_013659012.1
COORDINATES: similar to AA sequence:RefSeq:WP_003435784.1
COORDINATES: protein motif:HMM:NF028476.2
COORDINATES: similar to AA sequence:RefSeq:WP_020813762.1
COORDINATES: similar to AA sequence:RefSeq:WP_014311854.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255262.1
COORDINATES: similar to AA sequence:RefSeq:WP_005214429.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012062692.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065628.1
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: similar to AA sequence:RefSeq:WP_015392091.1
COORDINATES: similar to AA sequence:RefSeq:WP_020493006.1
COORDINATES: similar to AA sequence:RefSeq:WP_020492935.1
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064497.1
COORDINATES: similar to AA sequence:RefSeq:WP_005809913.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF012772.2
ABC transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007890552.1
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: protein motif:HMM:NF013070.2
COORDINATES: similar to AA sequence:RefSeq:WP_003357949.1
GO:0015572 - N-acetylglucosamine transmembrane transporter activity [Evidence IEA]
N-acetylglucosamine-specific PTS transporter subunit IIBC
COORDINATES: similar to AA sequence:RefSeq:WP_008907494.1
COORDINATES: protein motif:HMM:TIGR01003.1
COORDINATES: similar to AA sequence:RefSeq:WP_017210998.1
COORDINATES: similar to AA sequence:RefSeq:WP_010245089.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013655088.1
COORDINATES: similar to AA sequence:RefSeq:WP_012047979.1
COORDINATES: protein motif:HMM:NF015368.2
COORDINATES: protein motif:HMM:NF039776.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461835.1
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: similar to AA sequence:RefSeq:WP_012704747.1
COORDINATES: similar to AA sequence:RefSeq:WP_010963748.1
COORDINATES: similar to AA sequence:RefSeq:WP_005812153.1
COORDINATES: similar to AA sequence:RefSeq:WP_009325780.1
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF024055.2
COORDINATES: similar to AA sequence:RefSeq:WP_003423620.1
COORDINATES: similar to AA sequence:RefSeq:WP_005805860.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158190.1
COORDINATES: protein motif:HMM:NF012375.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064884.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062368.1
GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: similar to AA sequence:RefSeq:WP_018305134.1
COORDINATES: similar to AA sequence:RefSeq:WP_018305135.1
COORDINATES: protein motif:HMM:NF014762.2
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_018305713.1
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020073676.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018211918.1
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011458884.1
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009005747.1
COORDINATES: similar to AA sequence:RefSeq:WP_015526626.1
COORDINATES: similar to AA sequence:RefSeq:WP_010165683.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158555.1
COORDINATES: protein motif:HMM:NF016211.2
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007594654.1
COORDINATES: similar to AA sequence:RefSeq:WP_002579278.1
COORDINATES: similar to AA sequence:RefSeq:WP_003477173.1
COORDINATES: protein motif:HMM:NF025049.2
COORDINATES: similar to AA sequence:RefSeq:WP_006524121.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064021.1
COORDINATES: similar to AA sequence:RefSeq:WP_002579222.1
COORDINATES: protein motif:HMM:TIGR00392.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062903.1
glycoside hydrolase family 38 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: similar to AA sequence:RefSeq:WP_008721233.1
COORDINATES: similar to AA sequence:RefSeq:WP_014254217.1
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: similar to AA sequence:RefSeq:WP_002568768.1
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: similar to AA sequence:RefSeq:WP_009529092.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_006442500.1
COORDINATES: similar to AA sequence:RefSeq:WP_002580489.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025681.2
GxGYxYP family putative glycoside hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_002599083.1
COORDINATES: protein motif:HMM:NF014116.2
carbohydrate binding domain-containing protein
COORDINATES: protein motif:HMM:NF014425.2
COORDINATES: similar to AA sequence:RefSeq:WP_003400049.1
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002600178.1
COORDINATES: protein motif:HMM:NF019350.2
COORDINATES: similar to AA sequence:RefSeq:WP_003443239.1
COORDINATES: similar to AA sequence:RefSeq:WP_011987485.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076452.1
COORDINATES: similar to AA sequence:RefSeq:WP_008678173.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413769.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413768.1
iron export ABC transporter permease subunit FetB
COORDINATES: similar to AA sequence:RefSeq:WP_015614544.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024094.2
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_003485221.1
COORDINATES: protein motif:HMM:NF014626.2
GO:0008233 - peptidase activity [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF021615.2
COORDINATES: similar to AA sequence:RefSeq:WP_010244223.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF040063.1
COORDINATES: protein motif:HMM:NF040016.1
COORDINATES: similar to AA sequence:RefSeq:WP_013822607.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_018591747.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013657227.1
GO:0008720 - D-lactate dehydrogenase activity [Evidence IEA]; GO:0070404 - NADH binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009616971.1
COORDINATES: similar to AA sequence:RefSeq:WP_017413348.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250654.1
COORDINATES: similar to AA sequence:RefSeq:WP_010681244.1
COORDINATES: similar to AA sequence:RefSeq:WP_010297221.1
COORDINATES: protein motif:HMM:NF016114.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008392655.1
COORDINATES: similar to AA sequence:RefSeq:WP_016729071.1
GO:0008742 - L-ribulose-phosphate 4-epimerase activity [Evidence IEA]
GO:0019568 - arabinose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010076980.1
COORDINATES: similar to AA sequence:RefSeq:WP_008721308.1
COORDINATES: protein motif:HMM:NF015568.2
phosphoenolpyruvate-dependent sugar phosphotransferase system; functions with enzymes IIC (sgaT; ulaA) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012579.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010244002.1
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: similar to AA sequence:RefSeq:WP_020814896.1
COORDINATES: protein motif:HMM:NF017946.2
COORDINATES: similar to AA sequence:RefSeq:WP_009251212.1
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF025175.2
COORDINATES: similar to AA sequence:RefSeq:WP_018590603.1
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064942.1
COORDINATES: similar to AA sequence:RefSeq:WP_015516994.1
YiiX/YebB-like N1pC/P60 family cysteine hydrolase
COORDINATES: protein motif:HMM:NF015563.2
GO:0015297 - antiporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013703.2
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010296086.1
COORDINATES: protein motif:HMM:NF020543.2
COORDINATES: similar to AA sequence:RefSeq:WP_007062128.1
COORDINATES: similar to AA sequence:RefSeq:WP_002592316.1
COORDINATES: similar to AA sequence:RefSeq:WP_005338033.1
GO:0043687 - post-translational protein modification [Evidence IEA]
glycyl-radical enzyme activating protein
COORDINATES: protein motif:HMM:NF012589.2
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002592313.1
COORDINATES: similar to AA sequence:RefSeq:WP_002586881.1
COORDINATES: similar to AA sequence:RefSeq:WP_005338026.1
COORDINATES: similar to AA sequence:RefSeq:WP_002566882.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625121.1
COORDINATES: protein motif:HMM:NF006628.0
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00181.1
COORDINATES: similar to AA sequence:RefSeq:WP_013361244.1
COORDINATES: similar to AA sequence:RefSeq:WP_007858977.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0018209 - peptidyl-serine modification [Evidence IEA]; GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009295591.1
COORDINATES: similar to AA sequence:RefSeq:WP_003379271.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359791.1
GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011948863.1
COORDINATES: similar to AA sequence:RefSeq:WP_007287777.1
COORDINATES: protein motif:HMM:NF022460.2
COORDINATES: similar to AA sequence:RefSeq:WP_003365227.1
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: similar to AA sequence:RefSeq:WP_014520141.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076456.1
COORDINATES: protein motif:HMM:NF015818.2
COORDINATES: similar to AA sequence:RefSeq:WP_014187462.1
GO:0050097 - methylaspartate mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003541391.1
methylaspartate mutase accessory protein GlmL
COORDINATES: similar to AA sequence:RefSeq:WP_013809728.1
GO:0019670 - anaerobic glutamate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008909155.1
GO:0050096 - methylaspartate ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013842008.1
acyclic terpene utilization AtuA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012032660.1
COORDINATES: similar to AA sequence:RefSeq:WP_017825626.1
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: similar to AA sequence:RefSeq:WP_014904966.1
alanine-tRNA synthetase second additional domain-containing protein
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: protein motif:HMM:NF008750.0
COORDINATES: similar to AA sequence:RefSeq:WP_012064468.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073429.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0008753 - NADPH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016360219.1
COORDINATES: similar to AA sequence:RefSeq:WP_011100600.1
COORDINATES: protein motif:HMM:NF014758.2
COORDINATES: similar to AA sequence:RefSeq:WP_009888340.1
COORDINATES: similar to AA sequence:RefSeq:WP_003406611.1
COORDINATES: similar to AA sequence:RefSeq:WP_009250980.1
COORDINATES: similar to AA sequence:RefSeq:WP_006439362.1
COORDINATES: similar to AA sequence:RefSeq:WP_006782127.1
S1-like domain-containing RNA-binding protein
COORDINATES: protein motif:HMM:NF016906.2
COORDINATES: protein motif:HMM:NF014853.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013483413.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003359054.1
COORDINATES: protein motif:HMM:NF014904.2
[Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012720853.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011877874.1
Fe(3+) ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011590194.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590608.1
COORDINATES: similar to AA sequence:RefSeq:WP_013273331.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007063872.1
COORDINATES: similar to AA sequence:RefSeq:WP_003490141.1
COORDINATES: similar to AA sequence:RefSeq:WP_009902862.1
reductive dehalogenase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005923226.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_017826311.1
COORDINATES: similar to AA sequence:RefSeq:WP_003358212.1
COORDINATES: similar to AA sequence:RefSeq:WP_003496408.1
COORDINATES: similar to AA sequence:RefSeq:WP_002583096.1
COORDINATES: protein motif:HMM:NF024060.2
COORDINATES: similar to AA sequence:RefSeq:WP_018086175.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517241.1
COORDINATES: similar to AA sequence:RefSeq:WP_017353616.1
COORDINATES: similar to AA sequence:RefSeq:WP_013485572.1
COORDINATES: similar to AA sequence:RefSeq:WP_010239140.1
COORDINATES: similar to AA sequence:RefSeq:WP_013659175.1
COORDINATES: similar to AA sequence:RefSeq:WP_009219524.1
GO:0008697 - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity [Evidence IEA]
GO:0045490 - pectin catabolic process [Evidence IEA]
5-dehydro-4-deoxy-D-glucuronate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_008118927.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: protein motif:HMM:NF013156.2
COORDINATES: similar to AA sequence:RefSeq:WP_009895591.1
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012062715.1
COORDINATES: similar to AA sequence:RefSeq:WP_006771206.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021443.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF019128.2
COORDINATES: protein motif:HMM:NF016154.2
COORDINATES: similar to AA sequence:RefSeq:WP_012062401.1
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009250246.1
COORDINATES: protein motif:HMM:NF015970.2
COORDINATES: protein motif:HMM:NF024641.2
COORDINATES: protein motif:HMM:TIGR01300.1
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: protein motif:HMM:NF015993.2
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: similar to AA sequence:RefSeq:WP_011971697.1
glycerol-3-phosphate responsive antiterminator
COORDINATES: similar to AA sequence:RefSeq:WP_016147453.1
COORDINATES: similar to AA sequence:RefSeq:WP_015561536.1
COORDINATES: similar to AA sequence:RefSeq:WP_006426126.1
COORDINATES: similar to AA sequence:RefSeq:WP_003447306.1
COORDINATES: similar to AA sequence:RefSeq:WP_003457926.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013240382.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013724877.1
COORDINATES: protein motif:HMM:NF024938.2
GO:0009341 - beta-galactosidase complex [Evidence IEA]
GO:0004565 - beta-galactosidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010681027.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006427965.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004222775.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
ribonuclease III domain-containing protein
COORDINATES: protein motif:HMM:NF015013.2
COORDINATES: similar to AA sequence:RefSeq:WP_004845841.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_004035135.1
COORDINATES: similar to AA sequence:RefSeq:WP_014315365.1
RNA polymerase sporulation sigma factor SigH
COORDINATES: protein motif:HMM:NF025092.2
COORDINATES: similar to AA sequence:RefSeq:WP_003357639.1
COORDINATES: protein motif:HMM:NF036772.2
COORDINATES: protein motif:HMM:NF021501.2
COORDINATES: protein motif:HMM:NF039337.1
COORDINATES: protein motif:HMM:NF012933.2
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014080015.1
COORDINATES: similar to AA sequence:RefSeq:WP_012738769.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF040325.1
COORDINATES: similar to AA sequence:RefSeq:WP_003499896.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024257.2
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005213544.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_013381026.1
COORDINATES: similar to AA sequence:RefSeq:WP_015526284.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_004622105.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_013362100.1
COORDINATES: similar to AA sequence:RefSeq:WP_015616968.1
COORDINATES: similar to AA sequence:RefSeq:WP_014518875.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721084.1
COORDINATES: similar to AA sequence:RefSeq:WP_011967681.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004611806.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012058441.1
COORDINATES: similar to AA sequence:RefSeq:WP_016225774.1
COORDINATES: protein motif:HMM:NF017116.2
COORDINATES: protein motif:HMM:NF039645.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611172.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:NF013400.2
COORDINATES: similar to AA sequence:RefSeq:WP_009251031.1
COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011988931.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004052359.1
GO:0016052 - carbohydrate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015476.2
GO:0009044 - xylan 1,4-beta-xylosidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015585.2
COORDINATES: similar to AA sequence:RefSeq:WP_012201213.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625919.1
beta-galactosidase trimerization domain-containing protein
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: similar to AA sequence:RefSeq:WP_015521583.1
COORDINATES: similar to AA sequence:RefSeq:WP_004629658.1
COORDINATES: similar to AA sequence:RefSeq:WP_017212894.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014256458.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01750
ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT)
COORDINATES: similar to AA sequence:RefSeq:WP_009002031.1
COORDINATES: similar to AA sequence:RefSeq:WP_014256141.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004630647.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418483.1
COORDINATES: similar to AA sequence:RefSeq:WP_002569991.1
COORDINATES: similar to AA sequence:RefSeq:WP_012200041.1
GO:0070191 - methionine-R-sulfoxide reductase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006775463.1
COORDINATES: similar to AA sequence:RefSeq:WP_006776865.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721750.1
COORDINATES: similar to AA sequence:RefSeq:WP_008393276.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015393426.1
COORDINATES: similar to AA sequence:RefSeq:WP_004624373.1
GO:0008880 - glucuronate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014826192.1
COORDINATES: similar to AA sequence:RefSeq:WP_009527494.1
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF013117.2
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF039198.1
COORDINATES: similar to AA sequence:RefSeq:WP_011641343.1
energy-coupling factor ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013341.2
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_003023148.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017413252.1
COORDINATES: similar to AA sequence:RefSeq:WP_008418209.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274639.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274640.1
COORDINATES: similar to AA sequence:RefSeq:WP_002604885.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358561.1
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_012739580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002581931.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF016196.2
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: similar to AA sequence:RefSeq:WP_018592960.1
COORDINATES: similar to AA sequence:RefSeq:WP_002564705.1
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_009266329.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009246158.1
COORDINATES: protein motif:HMM:NF016689.2
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_007036431.1
COORDINATES: similar to AA sequence:RefSeq:WP_015044809.1
COORDINATES: protein motif:HMM:NF039841.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: similar to AA sequence:RefSeq:WP_013823948.1
COORDINATES: similar to AA sequence:RefSeq:WP_002590804.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002575948.1
COORDINATES: protein motif:HMM:NF015898.2
COORDINATES: similar to AA sequence:RefSeq:WP_004463781.1
COORDINATES: similar to AA sequence:RefSeq:WP_008424607.1
COORDINATES: protein motif:HMM:NF038403.1
permease prefix domain 1-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013626330.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198922.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005215515.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015516587.1
COORDINATES: similar to AA sequence:RefSeq:WP_005349008.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013705.2
DnaJ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009259293.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004627409.1
COORDINATES: similar to AA sequence:RefSeq:WP_005363181.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: protein motif:HMM:NF012863.2
COORDINATES: similar to AA sequence:RefSeq:WP_006568772.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF014234.2
COORDINATES: similar to AA sequence:RefSeq:WP_015544686.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006862590.1
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: similar to AA sequence:RefSeq:WP_009262243.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002566534.1
COORDINATES: similar to AA sequence:RefSeq:WP_012705156.1
COORDINATES: similar to AA sequence:RefSeq:WP_009325413.1
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013280497.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358356.1
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004628758.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002589381.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01856.1
GO:0004401 - histidinol-phosphatase activity [Evidence IEA]
histidinol-phosphatase HisJ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007037604.1
COORDINATES: similar to AA sequence:RefSeq:WP_007037605.1
COORDINATES: similar to AA sequence:RefSeq:WP_002568416.1
COORDINATES: similar to AA sequence:RefSeq:WP_002570338.1
COORDINATES: similar to AA sequence:RefSeq:WP_013274236.1
COORDINATES: similar to AA sequence:RefSeq:WP_019161621.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012198931.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0051775 - response to redox state [Evidence IEA]
redox-sensing transcriptional repressor Rex
COORDINATES: similar to AA sequence:RefSeq:WP_019162369.1
COORDINATES: similar to AA sequence:RefSeq:WP_012282614.1
COORDINATES: similar to AA sequence:RefSeq:WP_017416505.1
COORDINATES: similar to AA sequence:RefSeq:WP_009261951.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008392882.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006859360.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013272278.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_002601297.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003515618.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_003515616.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_008413178.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF014571.2
GO:0046353 - aminoglycoside 3-N-acetyltransferase activity [Evidence IEA]
GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:NF026863.2
COORDINATES: similar to AA sequence:RefSeq:WP_009204302.1
NFACT RNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013121441.1
COORDINATES: similar to AA sequence:RefSeq:WP_011723135.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017212430.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013124.2
COORDINATES: similar to AA sequence:RefSeq:WP_016440729.1
COORDINATES: similar to AA sequence:RefSeq:WP_002579574.1
COORDINATES: similar to AA sequence:RefSeq:WP_008975127.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016282041.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_009203930.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005334354.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004614474.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005360735.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_012200502.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF033484.1
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: protein motif:HMM:NF033483.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]
Stk1 family PASTA domain-containing Ser/Thr kinase
COORDINATES: similar to AA sequence:RefSeq:WP_004845891.1
COORDINATES: similar to AA sequence:RefSeq:WP_006440019.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019678047.1
COORDINATES: similar to AA sequence:RefSeq:WP_002567525.1
Asp23/Gls24 family envelope stress response protein
COORDINATES: similar to AA sequence:RefSeq:WP_009242679.1
COORDINATES: protein motif:HMM:NF008168.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004606748.1
COORDINATES: similar to AA sequence:RefSeq:WP_004080715.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_009757094.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:NF010191.0
COORDINATES: similar to AA sequence:RefSeq:WP_002583273.1
GO:0008959 - phosphate acetyltransferase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005336518.1
GO:0008776 - acetate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006085 - acetyl-CoA biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011721401.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003363848.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_013657315.1
COORDINATES: similar to AA sequence:RefSeq:WP_016278874.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014080117.1
COORDINATES: similar to AA sequence:RefSeq:WP_007718463.1
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015574128.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_000558589.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013658661.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658660.1
COORDINATES: similar to AA sequence:RefSeq:WP_003412015.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073913.1
COORDINATES: similar to AA sequence:RefSeq:WP_004624548.1
N-acetylmannosamine-6-phosphate 2-epimerase
COORDINATES: protein motif:HMM:NF024941.2
COORDINATES: protein motif:HMM:NF024240.2
COORDINATES: similar to AA sequence:RefSeq:WP_016440658.1
COORDINATES: similar to AA sequence:RefSeq:WP_012159319.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008424801.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516315.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657305.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005600577.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_003449446.1
COORDINATES: similar to AA sequence:RefSeq:WP_004845390.1
COORDINATES: similar to AA sequence:RefSeq:WP_018597529.1
COORDINATES: similar to AA sequence:RefSeq:WP_003374874.1
COORDINATES: similar to AA sequence:RefSeq:WP_008370588.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: similar to AA sequence:RefSeq:WP_016290920.1
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: similar to AA sequence:RefSeq:WP_006441560.1
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013854.2
non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:NF012678.2
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: similar to AA sequence:RefSeq:WP_008976117.1
COORDINATES: similar to AA sequence:RefSeq:WP_006861164.1
COORDINATES: similar to AA sequence:RefSeq:WP_015514067.1
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_016440226.1
GO:0009331 - glycerol-3-phosphate dehydrogenase complex [Evidence IEA]
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0046168 - glycerol-3-phosphate catabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_003515596.1
COORDINATES: similar to AA sequence:RefSeq:WP_008369315.1
GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009461000.1
COORDINATES: similar to AA sequence:RefSeq:WP_008392780.1
COORDINATES: similar to AA sequence:RefSeq:WP_008392779.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034273.1
COORDINATES: similar to AA sequence:RefSeq:WP_012742782.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0008441 - 3'(2'),5'-bisphosphate nucleotidase activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_015520479.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004162.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_012101825.1
COORDINATES: similar to AA sequence:RefSeq:WP_008398711.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_013120267.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015391550.1
COORDINATES: similar to AA sequence:RefSeq:WP_011010721.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_017209293.1
COORDINATES: protein motif:HMM:NF013507.2
COORDINATES: protein motif:HMM:NF012493.2
COORDINATES: similar to AA sequence:RefSeq:WP_008419935.1
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00697.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF014305.2
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: similar to AA sequence:RefSeq:WP_003511548.1
COORDINATES: protein motif:HMM:NF007148.0
COORDINATES: similar to AA sequence:RefSeq:WP_011971611.1
COORDINATES: similar to AA sequence:RefSeq:WP_010963516.1
COORDINATES: protein motif:HMM:NF028234.2
COORDINATES: similar to AA sequence:RefSeq:WP_018211067.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060063.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010249688.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:NF025401.2
COORDINATES: protein motif:HMM:NF005381.0
COORDINATES: protein motif:HMM:NF012700.2
COORDINATES: similar to AA sequence:RefSeq:WP_015560527.1
COORDINATES: similar to AA sequence:RefSeq:WP_018594000.1
COORDINATES: similar to AA sequence:RefSeq:WP_009756978.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015534883.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_008392952.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: similar to AA sequence:RefSeq:WP_008400762.1
COORDINATES: similar to AA sequence:RefSeq:WP_008392949.1
COORDINATES: similar to AA sequence:RefSeq:WP_018596494.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006782978.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003866776.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036359.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011010562.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006782938.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: similar to AA sequence:RefSeq:WP_003516665.1
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022308.2
COORDINATES: similar to AA sequence:RefSeq:WP_014118318.1
undecaprenyl diphosphate synthase family protein
COORDINATES: protein motif:HMM:NF013980.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_005211474.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014902923.1
COORDINATES: protein motif:HMM:NF016334.2
COORDINATES: similar to AA sequence:RefSeq:WP_013840449.1
COORDINATES: similar to AA sequence:RefSeq:WP_003375503.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009892935.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005602399.1
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012199684.1
COORDINATES: similar to AA sequence:RefSeq:WP_012160252.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002568636.1
COORDINATES: protein motif:HMM:TIGR04085.1
COORDINATES: protein motif:HMM:TIGR03975.1
RiPP maturation radical SAM C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005945859.1
COORDINATES: similar to AA sequence:RefSeq:WP_012200597.1
COORDINATES: protein motif:HMM:NF012970.2
COORDINATES: similar to AA sequence:RefSeq:WP_017825276.1
COORDINATES: protein motif:HMM:NF013125.2
COORDINATES: similar to AA sequence:RefSeq:WP_006427328.1
GO:0016874 - ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01195.1
GO:0008948 - oxaloacetate decarboxylase activity [Evidence IEA]; GO:0015081 - sodium ion transmembrane transporter activity [Evidence IEA]
GO:0036376 - sodium ion export across plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008118297.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290408.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008118301.1
oxaloacetate decarboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009757140.1
COORDINATES: similar to AA sequence:RefSeq:WP_009004321.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657267.1
GO:0004106 - chorismate mutase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012742478.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006781095.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013281423.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250161.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008983 - protein-glutamate O-methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
protein-glutamate O-methyltransferase CheR
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015514106.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_012200396.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015520759.1
COORDINATES: similar to AA sequence:RefSeq:WP_019161667.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_013657244.1
COORDINATES: similar to AA sequence:RefSeq:WP_008725896.1
COORDINATES: similar to AA sequence:RefSeq:WP_011641114.1
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: similar to AA sequence:RefSeq:WP_005214138.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_018592526.1
COORDINATES: similar to AA sequence:RefSeq:WP_018213255.1
COORDINATES: similar to AA sequence:RefSeq:WP_013239264.1
COORDINATES: similar to AA sequence:RefSeq:WP_015552827.1
COORDINATES: similar to AA sequence:RefSeq:WP_003462430.1
COORDINATES: similar to AA sequence:RefSeq:WP_003467311.1
COORDINATES: similar to AA sequence:RefSeq:WP_013239260.1
adenine deaminase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011010353.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003492924.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: similar to AA sequence:RefSeq:WP_015358673.1
COORDINATES: similar to AA sequence:RefSeq:WP_011948419.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_003356547.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: similar to AA sequence:RefSeq:WP_003355874.1
COORDINATES: similar to AA sequence:RefSeq:WP_011989228.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011989229.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003453585.1
COORDINATES: similar to AA sequence:RefSeq:WP_009247840.1
CD1871A family CXXC motif-containing protein
COORDINATES: protein motif:HMM:NF024211.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF027787.2
COORDINATES: similar to AA sequence:RefSeq:WP_010238244.1
COORDINATES: similar to AA sequence:RefSeq:WP_004628278.1
COORDINATES: similar to AA sequence:RefSeq:WP_009172960.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019851501.1
COORDINATES: protein motif:HMM:NF019490.2
COORDINATES: similar to AA sequence:RefSeq:WP_009062929.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062305.1
COORDINATES: protein motif:HMM:TIGR01178.1
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003435911.1
COORDINATES: protein motif:HMM:TIGR01906.1
COORDINATES: protein motif:HMM:NF022615.2
COORDINATES: similar to AA sequence:RefSeq:WP_004222158.1
COORDINATES: similar to AA sequence:RefSeq:WP_003512371.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360351.1
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: similar to AA sequence:RefSeq:WP_003489427.1
COORDINATES: similar to AA sequence:RefSeq:WP_007287671.1
nucleobase:cation symporter-2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014904285.1
COORDINATES: protein motif:HMM:NF013978.2
bis-aminopropyl spermidine synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003461310.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012488.2
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF016894.2
GO:0008671 - 2-dehydro-3-deoxygalactonokinase activity [Evidence IEA]
GO:0034194 - D-galactonate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006354090.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541237.1
COORDINATES: similar to AA sequence:RefSeq:WP_002566138.1
COORDINATES: similar to AA sequence:RefSeq:WP_009987026.1
COORDINATES: similar to AA sequence:RefSeq:WP_009987028.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009533560.1
COORDINATES: similar to AA sequence:RefSeq:WP_015528367.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036445.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF020945.2
GO:0043937 - regulation of sporulation [Evidence IEA]
Spo0E family sporulation regulatory protein-aspartic acid phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_012064006.1
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_018598414.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_004036450.1
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017413838.1
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_008976465.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_004036454.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_012743083.1
putative peptidoglycan glycosyltransferase FtsW
COORDINATES: similar to AA sequence:RefSeq:WP_008516023.1
COORDINATES: protein motif:HMM:NF015739.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014521294.1
COORDINATES: protein motif:HMM:NF015384.2
COORDINATES: similar to AA sequence:RefSeq:WP_006442065.1
RNA polymerase sporulation sigma factor SigE
COORDINATES: similar to AA sequence:RefSeq:WP_002574207.1
RNA polymerase sporulation sigma factor SigG
COORDINATES: similar to AA sequence:RefSeq:WP_005603217.1
COORDINATES: similar to AA sequence:RefSeq:WP_014079183.1
COORDINATES: similar to AA sequence:RefSeq:WP_013823175.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_015391979.1
COORDINATES: protein motif:HMM:TIGR00492.1
COORDINATES: protein motif:HMM:NF014445.2
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009204281.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015514517.1
GTP-sensing pleiotropic transcriptional regulator CodY
COORDINATES: protein motif:HMM:TIGR01396.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015925501.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004463165.1
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:NF013664.2
flagellar M-ring protein FliF C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006857498.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF018358.2
COORDINATES: similar to AA sequence:RefSeq:WP_012159338.1
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015896.2
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02530.1
TIGR02530 family flagellar biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_003517965.1
COORDINATES: similar to AA sequence:RefSeq:WP_016206582.1
COORDINATES: similar to AA sequence:RefSeq:WP_008118152.1
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_014079555.1
COORDINATES: similar to AA sequence:RefSeq:WP_016288815.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013361938.1
COORDINATES: protein motif:HMM:NF016250.2
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012063832.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: similar to AA sequence:RefSeq:WP_012742633.1
COORDINATES: protein motif:HMM:TIGR01400.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007883806.1
COORDINATES: similar to AA sequence:RefSeq:WP_016279136.1
COORDINATES: protein motif:HMM:TIGR03499.1
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015549888.1
COORDINATES: protein motif:HMM:NF024347.2
COORDINATES: similar to AA sequence:RefSeq:WP_014255125.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]; GO:0050568 - protein-glutamine glutaminase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0018277 - protein deamination [Evidence IEA]; GO:0006482 - protein demethylation [Evidence IEA]
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_012200703.1
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010249137.1
COORDINATES: similar to AA sequence:RefSeq:WP_012200701.1
COORDINATES: similar to AA sequence:RefSeq:WP_014079571.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290497.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF015894.2
COORDINATES: protein motif:HMM:NF039996.1
COORDINATES: similar to AA sequence:RefSeq:WP_009757197.1
COORDINATES: similar to AA sequence:RefSeq:WP_015530435.1
COORDINATES: similar to AA sequence:RefSeq:WP_008398407.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002604302.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006864016.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_016438995.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_007883844.1
COORDINATES: similar to AA sequence:RefSeq:WP_015524339.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_016440854.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015617938.1
COORDINATES: protein motif:HMM:NF033493.0
MetS family NSS transporter small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004846187.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012568.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008393655.1
GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018591895.1
COORDINATES: similar to AA sequence:RefSeq:WP_005600787.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005945699.1
COORDINATES: similar to AA sequence:RefSeq:WP_003372112.1
COORDINATES: similar to AA sequence:RefSeq:WP_008975320.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290788.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_015553615.1
COORDINATES: similar to AA sequence:RefSeq:WP_016207689.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002580439.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009530694.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
energy coupling factor transporter S component ThiW
COORDINATES: similar to AA sequence:RefSeq:WP_015390943.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF006830.0
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00693.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010074607.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009220856.1
COORDINATES: similar to AA sequence:RefSeq:WP_020491533.1
COORDINATES: similar to AA sequence:RefSeq:WP_014078729.1
COORDINATES: protein motif:HMM:TIGR00443.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]; GO:0030234 - enzyme regulator activity [Evidence IEA]
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012742528.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004845094.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003514577.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_004605642.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_012200794.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_010964259.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_010680937.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: protein motif:HMM:NF012503.2
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012059424.1
COORDINATES: similar to AA sequence:RefSeq:WP_013240802.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF
COORDINATES: similar to AA sequence:RefSeq:WP_016294232.1
COORDINATES: similar to AA sequence:RefSeq:WP_010296795.1
COORDINATES: similar to AA sequence:RefSeq:WP_010296797.1
COORDINATES: protein motif:HMM:NF024141.2
COORDINATES: similar to AA sequence:RefSeq:WP_013273982.1
COORDINATES: similar to AA sequence:RefSeq:WP_002568569.1
COORDINATES: similar to AA sequence:RefSeq:WP_010251919.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063409.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657092.1
COORDINATES: similar to AA sequence:RefSeq:WP_004853807.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003419041.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: similar to AA sequence:RefSeq:WP_003487446.1
GO:0022900 - electron transport chain [Evidence IEA]
RnfABCDGE type electron transport complex subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_003419045.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657097.1
COORDINATES: similar to AA sequence:RefSeq:WP_003507363.1
RnfABCDGE type electron transport complex subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_012200392.1
COORDINATES: similar to AA sequence:RefSeq:WP_003544885.1
COORDINATES: similar to AA sequence:RefSeq:WP_012200391.1
COORDINATES: protein motif:HMM:NF010539.0
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00219.1
COORDINATES: protein motif:HMM:TIGR03426.1
COORDINATES: protein motif:HMM:NF015716.2
GO:0000902 - cell morphogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004037550.1
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008119389.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0000918 - division septum site selection [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: protein motif:HMM:TIGR02210.1
COORDINATES: similar to AA sequence:RefSeq:WP_006774757.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0006007 - glucose catabolic process [Evidence IEA]; GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005603057.1
COORDINATES: similar to AA sequence:RefSeq:WP_015614253.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909406.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394015.1
COORDINATES: protein motif:HMM:NF024865.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160155.1
COORDINATES: similar to AA sequence:RefSeq:WP_004454919.1
COORDINATES: protein motif:HMM:NF019314.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
LytS/YhcK type 5TM receptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009757025.1
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein.; This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024112.2
COORDINATES: similar to AA sequence:RefSeq:WP_004845129.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF016363.2
GO:0090529 - cell septum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF014389.2
COORDINATES: protein motif:HMM:NF037631.2
COORDINATES: protein motif:HMM:NF016959.2
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018593922.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008753447.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062130.1
COORDINATES: similar to AA sequence:RefSeq:WP_014826195.1
COORDINATES: protein motif:HMM:NF017207.2
monomethylamine:corrinoid methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009244521.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514283.1
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: similar to AA sequence:RefSeq:WP_002599488.1
COORDINATES: similar to AA sequence:RefSeq:WP_011590899.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB
COORDINATES: similar to AA sequence:RefSeq:WP_014314898.1
COORDINATES: similar to AA sequence:RefSeq:WP_005358629.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: similar to AA sequence:RefSeq:WP_016288672.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004044.1
COORDINATES: similar to AA sequence:RefSeq:WP_014827340.1
GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012158500.1
COORDINATES: protein motif:HMM:NF017984.2
GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
GO:0036297 - interstrand cross-link repair [Evidence IEA]
crosslink repair DNA glycosylase YcaQ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012065265.1
COORDINATES: similar to AA sequence:RefSeq:WP_017212464.1
sulfur carrier protein ThiS adenylyltransferase ThiF
COORDINATES: similar to AA sequence:RefSeq:WP_017414891.1
GO:1990107 - thiazole synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012102031.1
GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008908670.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: similar to AA sequence:RefSeq:WP_010168762.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036223.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: protein motif:HMM:TIGR00857.1
COORDINATES: similar to AA sequence:RefSeq:WP_003376035.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015924291.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: similar to AA sequence:RefSeq:WP_003427354.1
COORDINATES: similar to AA sequence:RefSeq:WP_019226719.1
COORDINATES: similar to AA sequence:RefSeq:WP_010166743.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033788.1
COORDINATES: similar to AA sequence:RefSeq:WP_004629544.1
COORDINATES: protein motif:HMM:NF015081.2
COORDINATES: similar to AA sequence:RefSeq:WP_020813728.1
COORDINATES: similar to AA sequence:RefSeq:WP_010247771.1
GO:0019172 - glyoxalase III activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
type 1 glutamine amidotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014355868.1
COORDINATES: similar to AA sequence:RefSeq:WP_015617688.1
COORDINATES: similar to AA sequence:RefSeq:WP_005945595.1
tRNA 2-thiocytidine biosynthesis TtcA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008398224.1
COORDINATES: similar to AA sequence:RefSeq:WP_007889977.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006566707.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016287407.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: protein motif:HMM:NF000840.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012200561.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: similar to AA sequence:RefSeq:WP_015529220.1
COORDINATES: similar to AA sequence:RefSeq:WP_008370482.1
COORDINATES: similar to AA sequence:RefSeq:WP_009757005.1
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_005610036.1
COORDINATES: protein motif:HMM:TIGR00757.1
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_006864347.1
TIGR03960 family B12-binding radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_017895049.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_003491542.1
COORDINATES: similar to AA sequence:RefSeq:WP_014902326.1
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF022479.2
COORDINATES: similar to AA sequence:RefSeq:WP_011100113.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062539.1
COORDINATES: similar to AA sequence:RefSeq:WP_009445254.1
COORDINATES: similar to AA sequence:RefSeq:WP_005424624.1
COORDINATES: similar to AA sequence:RefSeq:WP_009268286.1
COORDINATES: similar to AA sequence:RefSeq:WP_002564335.1
COORDINATES: similar to AA sequence:RefSeq:WP_004846389.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF018435.2
cell division FtsA domain-containing protein
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009246128.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:NF019265.2
COORDINATES: protein motif:HMM:NF019113.2
COORDINATES: similar to AA sequence:RefSeq:WP_004627922.1
COORDINATES: protein motif:HMM:NF024742.2
COORDINATES: protein motif:HMM:NF014734.2
COORDINATES: protein motif:HMM:NF039416.1
COORDINATES: similar to AA sequence:RefSeq:WP_009251488.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002581304.1
COORDINATES: similar to AA sequence:RefSeq:WP_014902222.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158256.1
COORDINATES: similar to AA sequence:RefSeq:WP_014118670.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321257.1
COORDINATES: similar to AA sequence:RefSeq:WP_006772290.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
xanthine dehydrogenase FAD-binding subunit XdhB
COORDINATES: similar to AA sequence:RefSeq:WP_002590709.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
xanthine dehydrogenase molybdenum-binding subunit XdhA
COORDINATES: similar to AA sequence:RefSeq:WP_006571908.1
COORDINATES: similar to AA sequence:RefSeq:WP_012424422.1
COORDINATES: similar to AA sequence:RefSeq:WP_012451335.1
YgeY family selenium metabolism-linked hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014862379.1
COORDINATES: similar to AA sequence:RefSeq:WP_016295306.1
COORDINATES: similar to AA sequence:RefSeq:WP_006781282.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
putative selenate reductase subunit YgfK
COORDINATES: similar to AA sequence:RefSeq:WP_017752134.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0004854 - xanthine dehydrogenase activity [Evidence IEA]
GO:0046415 - urate metabolic process [Evidence IEA]
selenium-dependent xanthine dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_006782472.1
COORDINATES: similar to AA sequence:RefSeq:WP_002588192.1
COORDINATES: similar to AA sequence:RefSeq:WP_009250961.1
COORDINATES: protein motif:HMM:NF018749.2
COORDINATES: similar to AA sequence:RefSeq:WP_017751394.1
selenium-dependent molybdenum cofactor biosynthesis protein YqeB
COORDINATES: protein motif:HMM:TIGR03172.2
selenium cofactor biosynthesis protein YqeC
COORDINATES: protein motif:HMM:NF015239.2
GO:0017111 - ribonucleoside triphosphate phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: similar to AA sequence:RefSeq:WP_012199368.1
COORDINATES: protein motif:HMM:NF013279.2
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: protein motif:HMM:NF017016.2
GO:0000917 - division septum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF024212.2
winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_004845056.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_004606735.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: protein motif:HMM:NF039476.1
COORDINATES: protein motif:HMM:NF015380.2
COORDINATES: protein motif:HMM:NF013508.2
COORDINATES: protein motif:HMM:NF025608.2
GO:0009976 - tocopherol cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014095207.1
COORDINATES: similar to AA sequence:RefSeq:WP_007049934.1
COORDINATES: similar to AA sequence:RefSeq:WP_015549036.1
GO:0015573 - beta-glucoside transmembrane transporter activity [Evidence IEA]
GO:0015759 - beta-glucoside transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
beta-glucoside-specific PTS transporter subunit IIABC
COORDINATES: similar to AA sequence:RefSeq:WP_009168321.1
COORDINATES: similar to AA sequence:RefSeq:WP_009532508.1
COORDINATES: similar to AA sequence:RefSeq:WP_015524849.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007051012.1
COORDINATES: similar to AA sequence:RefSeq:WP_008391317.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014165.2
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007285481.1
COORDINATES: similar to AA sequence:RefSeq:WP_003540293.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964852.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: protein motif:HMM:NF022702.2
COORDINATES: protein motif:HMM:NF013391.2
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006780606.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019318.2
COORDINATES: similar to AA sequence:RefSeq:WP_008975763.1
COORDINATES: protein motif:HMM:TIGR02876.1
COORDINATES: protein motif:HMM:NF019488.2
COORDINATES: similar to AA sequence:RefSeq:WP_006440915.1
COORDINATES: similar to AA sequence:RefSeq:WP_005603101.1
COORDINATES: protein motif:HMM:NF021127.2
GO:0045227 - capsule polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009243326.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013421.2
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012721403.1
COORDINATES: protein motif:HMM:NF025634.2
COORDINATES: similar to AA sequence:RefSeq:WP_013726549.1
COORDINATES: similar to AA sequence:RefSeq:WP_015617080.1
COORDINATES: similar to AA sequence:RefSeq:WP_010241263.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: protein motif:HMM:NF024921.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006773279.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017212880.1
COORDINATES: protein motif:HMM:TIGR01581.1
COORDINATES: similar to AA sequence:RefSeq:WP_003425833.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_003412899.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359078.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015734.2
COORDINATES: similar to AA sequence:RefSeq:WP_016297405.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158329.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent
COORDINATES: protein motif:HMM:NF017902.2
COORDINATES: protein motif:HMM:TIGR00702.1
COORDINATES: protein motif:HMM:TIGR00456.1
COORDINATES: similar to AA sequence:RefSeq:WP_015617764.1
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010963596.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023401.2
COORDINATES: similar to AA sequence:RefSeq:WP_007059064.1
COORDINATES: similar to AA sequence:RefSeq:WP_011987720.1
COORDINATES: similar to AA sequence:RefSeq:WP_007869834.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013239846.1
COORDINATES: similar to AA sequence:RefSeq:WP_020492773.1
COORDINATES: similar to AA sequence:RefSeq:WP_019225628.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359276.1
GO:0045027 - DNA end binding [Evidence IEA]
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016286342.1
COORDINATES: protein motif:HMM:NF014066.2
COORDINATES: similar to AA sequence:RefSeq:WP_003515671.1
GO:0004372 - glycine hydroxymethyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0070905 - serine binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0019264 - glycine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF018448.2
threonine/serine exporter family protein
COORDINATES: protein motif:HMM:NF024230.2
COORDINATES: similar to AA sequence:RefSeq:WP_003515313.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00654.1
PhzF family phenazine biosynthesis protein
COORDINATES: protein motif:HMM:NF015534.2
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005806425.1
COORDINATES: similar to AA sequence:RefSeq:WP_002569098.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: similar to AA sequence:RefSeq:WP_002594343.1
TRAP transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012829.2
COORDINATES: similar to AA sequence:RefSeq:WP_015391913.1
COORDINATES: protein motif:HMM:NF006829.0
COORDINATES: similar to AA sequence:RefSeq:WP_003373750.1
acetyl-CoA hydrolase/transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016205970.1
COORDINATES: protein motif:HMM:NF013810.2
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: similar to AA sequence:RefSeq:WP_003544596.1
COORDINATES: similar to AA sequence:RefSeq:WP_009624165.1
GO:0015803 - branched-chain amino acid transport [Evidence IEA]
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_012157970.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003452347.1
COORDINATES: similar to AA sequence:RefSeq:WP_007783108.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02395.1
COORDINATES: similar to AA sequence:RefSeq:WP_005866270.1
COORDINATES: similar to AA sequence:RefSeq:WP_003409523.1
COORDINATES: similar to AA sequence:RefSeq:WP_012704395.1
COORDINATES: similar to AA sequence:RefSeq:WP_017212914.1
COORDINATES: protein motif:HMM:NF021561.2
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007129519.1
COORDINATES: similar to AA sequence:RefSeq:WP_014094681.1
COORDINATES: similar to AA sequence:RefSeq:WP_008680782.1
COORDINATES: protein motif:HMM:NF024626.2
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015614294.1
COORDINATES: similar to AA sequence:RefSeq:WP_008721606.1
COORDINATES: similar to AA sequence:RefSeq:WP_014314341.1
COORDINATES: similar to AA sequence:RefSeq:WP_020814923.1
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_014314344.1
COORDINATES: similar to AA sequence:RefSeq:WP_020072010.1
COORDINATES: similar to AA sequence:RefSeq:WP_015528247.1
GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - monoatomic anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: similar to AA sequence:RefSeq:WP_018306195.1
COORDINATES: similar to AA sequence:RefSeq:WP_005808159.1
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: similar to AA sequence:RefSeq:WP_008401762.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003422928.1
COORDINATES: similar to AA sequence:RefSeq:WP_004073018.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015616563.1
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: protein motif:HMM:NF001377.0
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_041721410.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012282976.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]; GO:0004049 - anthranilate synthase activity [Evidence IEA]
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:TIGR00564.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002602161.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517065.1
COORDINATES: similar to AA sequence:RefSeq:WP_004222985.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0015970 - guanosine tetraphosphate biosynthetic process [Evidence IEA]
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF024929.2
COORDINATES: protein motif:HMM:NF012885.2
in Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017752324.1
COORDINATES: protein motif:HMM:TIGR01290.1
GO:0009399 - nitrogen fixation [Evidence IEA]
nitrogenase cofactor biosynthesis protein NifB
COORDINATES: similar to AA sequence:RefSeq:WP_012064608.1
COORDINATES: similar to AA sequence:RefSeq:WP_002581630.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
COORDINATES: similar to AA sequence:RefSeq:WP_011879116.1
GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
GO:0016163 - nitrogenase activity [Evidence IEA]
nitrogenase molybdenum-iron protein subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_010074629.1
nitrogenase molybdenum-iron protein alpha chain
COORDINATES: similar to AA sequence:RefSeq:WP_015393157.1
COORDINATES: similar to AA sequence:RefSeq:WP_010963577.1
COORDINATES: similar to AA sequence:RefSeq:WP_010963576.1
GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010167381.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517069.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_009250042.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012741874.1
GO:0031179 - peptide modification [Evidence IEA]
thioether cross-link-forming SCIFF peptide maturase
COORDINATES: similar to AA sequence:RefSeq:WP_004621760.1
COORDINATES: protein motif:HMM:TIGR04086.1
COORDINATES: similar to AA sequence:RefSeq:WP_004222709.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012060058.1
COORDINATES: protein motif:HMM:TIGR00739.1
COORDINATES: similar to AA sequence:RefSeq:WP_009460892.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015529124.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013465.2
COORDINATES: similar to AA sequence:RefSeq:WP_007785887.1
COORDINATES: similar to AA sequence:RefSeq:WP_013725964.1
COORDINATES: similar to AA sequence:RefSeq:WP_010299529.1
COORDINATES: protein motif:HMM:NF024741.2
COORDINATES: protein motif:HMM:TIGR00077.1
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_007887159.1
COORDINATES: similar to AA sequence:RefSeq:WP_016360280.1
COORDINATES: similar to AA sequence:RefSeq:WP_009255617.1
COORDINATES: protein motif:HMM:NF024770.2
COORDINATES: similar to AA sequence:RefSeq:WP_020491134.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014313309.1
COORDINATES: similar to AA sequence:RefSeq:WP_014792256.1
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: protein motif:HMM:NF005300.0
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: similar to AA sequence:RefSeq:WP_003499240.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF025851.2
COORDINATES: similar to AA sequence:RefSeq:WP_009003686.1
COORDINATES: protein motif:HMM:NF025861.2
glycoside hydrolase family 30 beta sandwich domain-containing protein
COORDINATES: protein motif:HMM:NF014078.2
COORDINATES: similar to AA sequence:RefSeq:WP_003356112.1
COORDINATES: similar to AA sequence:RefSeq:WP_003487868.1
produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; Derived by automated computational analysis using gene prediction method: Protein Homology.
glycoside hydrolase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004618915.1
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF020367.2
COORDINATES: similar to AA sequence:RefSeq:WP_007048695.1
COORDINATES: similar to AA sequence:RefSeq:WP_018594717.1
COORDINATES: protein motif:HMM:NF017634.2
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: similar to AA sequence:RefSeq:WP_009171598.1
COORDINATES: similar to AA sequence:RefSeq:WP_014313854.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358007.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008887 - glycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011196612.1
COORDINATES: protein motif:HMM:NF017466.2
sugar diacid recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006857710.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
GO:0030436 - asexual sporulation [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0042173 - regulation of sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02860.1
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: similar to AA sequence:RefSeq:WP_012200522.1
GO:0006525 - arginine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: similar to AA sequence:RefSeq:WP_012739318.1
COORDINATES: protein motif:HMM:NF003933.0
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004034846.1
COORDINATES: similar to AA sequence:RefSeq:WP_005610151.1
COORDINATES: similar to AA sequence:RefSeq:WP_003019909.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019162329.1
COORDINATES: similar to AA sequence:RefSeq:WP_004605977.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_002569671.1
COORDINATES: protein motif:HMM:NF024097.2
COORDINATES: protein motif:HMM:NF021121.2
COORDINATES: protein motif:HMM:NF021088.2
COORDINATES: protein motif:HMM:TIGR02849.1
COORDINATES: similar to AA sequence:RefSeq:WP_004033670.1
COORDINATES: protein motif:HMM:NF021090.2
COORDINATES: similar to AA sequence:RefSeq:WP_003019895.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517139.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120594.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290277.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01668.1
GO:0008962 - phosphatidylglycerophosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: protein motif:HMM:NF003417.0
COORDINATES: protein motif:HMM:NF013698.2
COORDINATES: protein motif:HMM:NF014805.2
COORDINATES: protein motif:HMM:TIGR01048.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF026257.2
COORDINATES: similar to AA sequence:RefSeq:WP_003457575.1
COORDINATES: protein motif:HMM:NF012899.2
COORDINATES: protein motif:HMM:NF012383.2
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF013227.2
GO:0008483 - transaminase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF013168.2
COORDINATES: similar to AA sequence:RefSeq:WP_007061406.1
COORDINATES: protein motif:HMM:TIGR01855.1
COORDINATES: protein motif:HMM:NF037096.2
COORDINATES: similar to AA sequence:RefSeq:WP_004611975.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF027273.2
COORDINATES: similar to AA sequence:RefSeq:WP_012450242.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0042173 - regulation of sporulation resulting in formation of a cellular spore [Evidence IEA]
RNA polymerase sporulation sigma factor SigK
COORDINATES: similar to AA sequence:RefSeq:WP_004033941.1
COORDINATES: similar to AA sequence:RefSeq:WP_009204602.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009267894.1
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008976275.1
COORDINATES: protein motif:HMM:NF018633.2
COORDINATES: similar to AA sequence:RefSeq:WP_013657148.1
COORDINATES: similar to AA sequence:RefSeq:WP_013271606.1
COORDINATES: similar to AA sequence:RefSeq:WP_012742738.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_012200315.1
COORDINATES: similar to AA sequence:RefSeq:WP_009757236.1
GO:0140741 - tRNA U4 sulfurtransferase [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004843004.1
COORDINATES: similar to AA sequence:RefSeq:WP_015756347.1
COORDINATES: similar to AA sequence:RefSeq:WP_009262786.1
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: protein motif:HMM:NF018076.2
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009246434.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016439050.1
COORDINATES: similar to AA sequence:RefSeq:WP_006427034.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016292153.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_004840507.1
COORDINATES: similar to AA sequence:RefSeq:WP_009243914.1
COORDINATES: protein motif:HMM:NF019097.2
COORDINATES: similar to AA sequence:RefSeq:WP_003515630.1
GO:0004175 - endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005947124.1
COORDINATES: protein motif:HMM:NF019930.2
GO:0004568 - chitinase activity [Evidence IEA]
GO:0006032 - chitin catabolic process [Evidence IEA]
chitinase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: similar to AA sequence:RefSeq:WP_019160710.1
COORDINATES: protein motif:HMM:TIGR00426.1
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004623546.1
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004616305.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004618024.1
COORDINATES: similar to AA sequence:RefSeq:WP_018593754.1
COORDINATES: similar to AA sequence:RefSeq:WP_013726738.1
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010966455.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR03943.1
COORDINATES: protein motif:HMM:NF015786.2
COORDINATES: similar to AA sequence:RefSeq:WP_007783827.1
COORDINATES: protein motif:HMM:NF021033.2
COORDINATES: similar to AA sequence:RefSeq:WP_008677461.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008908075.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007782129.1
COORDINATES: similar to AA sequence:RefSeq:WP_007782125.1
COORDINATES: similar to AA sequence:RefSeq:WP_003518669.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008392479.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007064376.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008517590.1
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013656418.1
COORDINATES: similar to AA sequence:RefSeq:WP_009002983.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004845606.1
GO:0004042 - acetyl-CoA:L-glutamate N-acetyltransferase activity [Evidence IEA]; GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014355742.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013624841.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004630079.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014254499.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013384.2
COORDINATES: similar to AA sequence:RefSeq:WP_014903129.1
COORDINATES: similar to AA sequence:RefSeq:WP_003542421.1
COORDINATES: protein motif:HMM:NF016364.2
COORDINATES: protein motif:HMM:NF024681.2
COORDINATES: similar to AA sequence:RefSeq:WP_002596593.1
COORDINATES: protein motif:HMM:NF014582.2
GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010963552.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_020491138.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013657594.1
COORDINATES: protein motif:HMM:NF015336.2
GO:2001070 - starch binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:NF021452.2
COORDINATES: similar to AA sequence:RefSeq:WP_020813842.1
GO:0003844 - 1,4-alpha-glucan branching enzyme activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: protein motif:HMM:TIGR01933.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015945316.1
COORDINATES: similar to AA sequence:RefSeq:WP_020072598.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_009249341.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014312018.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012634582.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015390421.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_017825909.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_010076062.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064493.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657837.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010073339.1
COORDINATES: similar to AA sequence:RefSeq:WP_010249044.1
COORDINATES: similar to AA sequence:RefSeq:WP_009061775.1
COORDINATES: similar to AA sequence:RefSeq:WP_010292858.1
COORDINATES: similar to AA sequence:RefSeq:WP_005949028.1
COORDINATES: protein motif:HMM:NF027567.2
COORDINATES: similar to AA sequence:RefSeq:WP_011876923.1
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003513460.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
type I-B CRISPR-associated endonuclease Cas1b
COORDINATES: similar to AA sequence:RefSeq:WP_008909993.1
COORDINATES: protein motif:HMM:TIGR01587.1
COORDINATES: protein motif:HMM:NF021240.2
COORDINATES: similar to AA sequence:RefSeq:WP_003513455.1
type I-B CRISPR-associated protein Cas7/Cst2/DevR
COORDINATES: protein motif:HMM:TIGR01877.1
WYL domain-containing transcriptional regulator
COORDINATES: protein motif:HMM:NF015728.2
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: protein motif:HMM:TIGR01888.1
type III-B CRISPR module-associated protein Cmr3
COORDINATES: protein motif:HMM:NF023885.2
type III-B CRISPR-associated protein Cas10/Cmr2
type III-B CRISPR module RAMP protein Cmr6
COORDINATES: protein motif:HMM:NF021237.2
type III-B CRISPR module-associated protein Cmr5
COORDINATES: protein motif:HMM:TIGR02580.1
COORDINATES: similar to AA sequence:RefSeq:WP_014354979.1
COORDINATES: similar to AA sequence:RefSeq:WP_014354978.1
COORDINATES: similar to AA sequence:RefSeq:WP_018307038.1
COORDINATES: similar to AA sequence:RefSeq:WP_004617131.1
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:NF006396.0
bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase
COORDINATES: protein motif:HMM:NF023636.2
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: similar to AA sequence:RefSeq:WP_010966830.1
GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]; GO:0098847 - sequence-specific single stranded DNA binding [Evidence IEA]
GO:0051304 - chromosome separation [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]; GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: protein motif:HMM:NF016535.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010075260.1
COORDINATES: protein motif:HMM:TIGR01517.1
GO:0005388 - P-type calcium transporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
calcium-translocating P-type ATPase, PMCA-type
COORDINATES: similar to AA sequence:RefSeq:WP_010965887.1
COORDINATES: similar to AA sequence:RefSeq:WP_003358177.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909897.1
GlmL-related ornithine degradation protein
COORDINATES: similar to AA sequence:RefSeq:WP_012063500.1
D-ornithine 4,5-aminomutase subunit OraE
COORDINATES: similar to AA sequence:RefSeq:WP_008909899.1
COORDINATES: similar to AA sequence:RefSeq:WP_008909900.1
2-amino-4-oxopentanoate thiolase subunit OrtB
COORDINATES: similar to AA sequence:RefSeq:WP_012159550.1
2-amino-4-oxopentanoate thiolase subunit OrtA
COORDINATES: similar to AA sequence:RefSeq:WP_013361507.1
COORDINATES: similar to AA sequence:RefSeq:WP_012065567.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064266.1
GO:0016990 - arginine deiminase activity [Evidence IEA]
GO:0019546 - arginine deiminase pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004617955.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011098803.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012451693.1
COORDINATES: protein motif:HMM:TIGR04377.1
COORDINATES: protein motif:HMM:NF016826.2
COORDINATES: protein motif:HMM:TIGR00167.1
COORDINATES: similar to AA sequence:RefSeq:WP_006443659.1
COORDINATES: similar to AA sequence:RefSeq:WP_003377288.1
COORDINATES: similar to AA sequence:RefSeq:WP_006443639.1
COORDINATES: similar to AA sequence:RefSeq:WP_014255021.1
COORDINATES: protein motif:HMM:NF021021.2
COORDINATES: similar to AA sequence:RefSeq:WP_003517736.1
COORDINATES: similar to AA sequence:RefSeq:WP_012200570.1
COORDINATES: similar to AA sequence:RefSeq:WP_010297315.1
COORDINATES: similar to AA sequence:RefSeq:WP_012059924.1
COORDINATES: protein motif:HMM:NF024107.2
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: similar to AA sequence:RefSeq:WP_009254377.1
COORDINATES: similar to AA sequence:RefSeq:WP_004629070.1
COORDINATES: protein motif:HMM:NF037292.2
COORDINATES: protein motif:HMM:NF012377.2
COORDINATES: protein motif:HMM:TIGR01891.1
COORDINATES: similar to AA sequence:RefSeq:WP_003542340.1
COORDINATES: protein motif:HMM:NF019874.2
COORDINATES: similar to AA sequence:RefSeq:WP_009528223.1
cyclodeaminase/cyclohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003497611.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015574747.1
GO:0030412 - formimidoyltetrahydrofolate cyclodeaminase activity [Evidence IEA]; GO:0030409 - glutamate formimidoyltransferase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011100458.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007059230.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: similar to AA sequence:RefSeq:WP_009001538.1
COORDINATES: similar to AA sequence:RefSeq:WP_016321236.1
OAM dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013361592.1
COORDINATES: similar to AA sequence:RefSeq:WP_010293638.1
COORDINATES: similar to AA sequence:RefSeq:WP_009258627.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013361596.1
L-erythro-3,5-diaminohexanoate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_015395722.1
COORDINATES: similar to AA sequence:RefSeq:WP_007493059.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_010293644.1
COORDINATES: similar to AA sequence:RefSeq:WP_011968121.1
GO:0043295 - glutathione binding [Evidence IEA]; GO:0004602 - glutathione peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014254372.1
SEC-C metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007885813.1
COORDINATES: similar to AA sequence:RefSeq:WP_016205694.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355645.1
COORDINATES: similar to AA sequence:RefSeq:WP_011099631.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF017809.2
AlkA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017414000.1
COORDINATES: similar to AA sequence:RefSeq:WP_013119833.1
COORDINATES: similar to AA sequence:RefSeq:WP_015544809.1
COORDINATES: similar to AA sequence:RefSeq:WP_005214683.1
COORDINATES: similar to AA sequence:RefSeq:WP_010075250.1
COORDINATES: similar to AA sequence:RefSeq:WP_003528233.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062170.1
COORDINATES: similar to AA sequence:RefSeq:WP_015616715.1
COORDINATES: protein motif:HMM:NF039679.1
COORDINATES: similar to AA sequence:RefSeq:WP_009171719.1
COORDINATES: similar to AA sequence:RefSeq:WP_014254222.1
COORDINATES: protein motif:HMM:NF024297.2
COORDINATES: similar to AA sequence:RefSeq:WP_019850736.1
COORDINATES: similar to AA sequence:RefSeq:WP_010291908.1
COORDINATES: similar to AA sequence:RefSeq:WP_013380638.1
COORDINATES: similar to AA sequence:RefSeq:WP_008424104.1
COORDINATES: similar to AA sequence:RefSeq:WP_012103332.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_006444298.1
BsuPI-related putative proteinase inhibitor
COORDINATES: similar to AA sequence:RefSeq:WP_014080386.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009252891.1
COORDINATES: protein motif:HMM:NF015866.2
GO:0005507 - copper ion binding [Evidence IEA]
GO:0055070 - copper ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003512177.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005426903.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_005363862.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009248457.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003492042.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_003507280.1
GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002574015.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006444146.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
Fe-S cluster assembly scaffold protein NifU
COORDINATES: similar to AA sequence:RefSeq:WP_009268312.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008391664.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063943.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006782088.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: similar to AA sequence:RefSeq:WP_012341969.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_004607255.1
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
basic amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006426296.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008397872.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:NF004282.0
GO:0031177 - phosphopantetheine binding [Evidence IEA]
non-ribosomal peptide synthase/polyketide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_010963547.1
COORDINATES: protein motif:HMM:TIGR00238.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007060792.1
COORDINATES: similar to AA sequence:RefSeq:WP_003021275.1
COORDINATES: similar to AA sequence:RefSeq:WP_007788866.1
COORDINATES: similar to AA sequence:RefSeq:WP_010294815.1
COORDINATES: similar to AA sequence:RefSeq:WP_012344345.1
COORDINATES: similar to AA sequence:RefSeq:WP_003490981.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253985.1
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: similar to AA sequence:RefSeq:WP_003487153.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010233524.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: protein motif:HMM:NF024891.2
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002596523.1
COORDINATES: similar to AA sequence:RefSeq:WP_010234355.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010964981.1
COORDINATES: similar to AA sequence:RefSeq:WP_013271956.1
COORDINATES: similar to AA sequence:RefSeq:WP_011989006.1
COORDINATES: similar to AA sequence:RefSeq:NP_465540.1
COORDINATES: similar to AA sequence:RefSeq:WP_009255353.1
COORDINATES: similar to AA sequence:RefSeq:WP_010168813.1
COORDINATES: similar to AA sequence:RefSeq:WP_005336469.1
COORDINATES: similar to AA sequence:RefSeq:WP_015390954.1
COORDINATES: similar to AA sequence:RefSeq:WP_014116773.1
COORDINATES: similar to AA sequence:RefSeq:WP_002595451.1
COORDINATES: similar to AA sequence:RefSeq:WP_003477090.1
COORDINATES: similar to AA sequence:RefSeq:WP_009256537.1
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: similar to AA sequence:RefSeq:WP_006781195.1
COORDINATES: similar to AA sequence:RefSeq:WP_002600752.1
COORDINATES: protein motif:HMM:NF026253.2
COORDINATES: similar to AA sequence:RefSeq:WP_009644455.1
COORDINATES: protein motif:HMM:NF019500.2
GO:0005267 - potassium channel activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012450635.1
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_008750783.1
COORDINATES: protein motif:HMM:NF012697.2
COORDINATES: protein motif:HMM:NF024209.2
leucine-rich repeat domain-containing protein
COORDINATES: protein motif:HMM:NF017655.2
COORDINATES: similar to AA sequence:RefSeq:WP_003387519.1
COORDINATES: similar to AA sequence:RefSeq:WP_010298198.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721564.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03026.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010075036.1
COORDINATES: similar to AA sequence:RefSeq:WP_002845928.1
COORDINATES: similar to AA sequence:RefSeq:WP_013272465.1
COORDINATES: similar to AA sequence:RefSeq:WP_006568729.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0018455 - alcohol dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01488.1
COORDINATES: similar to AA sequence:RefSeq:WP_015357756.1
COORDINATES: similar to AA sequence:RefSeq:WP_013658367.1
COORDINATES: similar to AA sequence:RefSeq:WP_002579181.1
COORDINATES: similar to AA sequence:RefSeq:WP_015926349.1
COORDINATES: similar to AA sequence:RefSeq:WP_015926352.1
COORDINATES: similar to AA sequence:RefSeq:WP_016298586.1
COORDINATES: similar to AA sequence:RefSeq:WP_004617903.1
COORDINATES: similar to AA sequence:RefSeq:WP_007779033.1
COORDINATES: similar to AA sequence:RefSeq:WP_012424772.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076168.1
COORDINATES: similar to AA sequence:RefSeq:WP_014902386.1
COORDINATES: similar to AA sequence:RefSeq:WP_002599410.1
COORDINATES: similar to AA sequence:RefSeq:WP_015614631.1
COORDINATES: protein motif:HMM:NF028259.2
COORDINATES: similar to AA sequence:RefSeq:WP_012062091.1
COORDINATES: similar to AA sequence:RefSeq:WP_008513874.1
COORDINATES: similar to AA sequence:RefSeq:WP_007889148.1
COORDINATES: similar to AA sequence:RefSeq:WP_006857417.1
COORDINATES: similar to AA sequence:RefSeq:WP_018597761.1
COORDINATES: similar to AA sequence:RefSeq:WP_006857419.1
COORDINATES: similar to AA sequence:RefSeq:WP_003434191.1
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010251136.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: similar to AA sequence:RefSeq:WP_009082348.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524639.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009065290.1
COORDINATES: similar to AA sequence:RefSeq:WP_008419273.1
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: protein motif:HMM:TIGR00474.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159590.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010076438.1
COORDINATES: similar to AA sequence:RefSeq:WP_015944990.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_010240805.1
dipeptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014262799.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656472.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360800.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358507.1
COORDINATES: similar to AA sequence:RefSeq:WP_012031684.1
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: similar to AA sequence:RefSeq:WP_006568277.1
COORDINATES: similar to AA sequence:RefSeq:WP_012703997.1
COORDINATES: similar to AA sequence:RefSeq:WP_015514869.1
COORDINATES: similar to AA sequence:RefSeq:WP_014795191.1
COORDINATES: similar to AA sequence:RefSeq:WP_012033496.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355290.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355289.1
COORDINATES: similar to AA sequence:RefSeq:WP_003360525.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657968.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015393937.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0043768 - S-ribosylhomocysteine lyase activity [Evidence IEA]
GO:0009372 - quorum sensing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009202811.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358073.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013106.2
GO:0008955 - peptidoglycan glycosyltransferase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
biosynthetic peptidoglycan transglycosylase
COORDINATES: protein motif:HMM:NF014614.2
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014186125.1
COORDINATES: protein motif:HMM:NF019237.2
COORDINATES: similar to AA sequence:RefSeq:WP_006571323.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063205.1
COORDINATES: protein motif:HMM:NF025582.2
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: similar to AA sequence:RefSeq:WP_014255721.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_004611250.1
COORDINATES: similar to AA sequence:RefSeq:WP_010251080.1
COORDINATES: similar to AA sequence:RefSeq:WP_012451672.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012576.2
COORDINATES: similar to AA sequence:RefSeq:WP_016295172.1
COORDINATES: similar to AA sequence:RefSeq:WP_010168686.1
COORDINATES: similar to AA sequence:RefSeq:WP_008977328.1
COORDINATES: similar to AA sequence:RefSeq:WP_012102862.1
COORDINATES: similar to AA sequence:RefSeq:WP_014792254.1
COORDINATES: similar to AA sequence:RefSeq:WP_016289297.1
COORDINATES: similar to AA sequence:RefSeq:WP_002583788.1
COORDINATES: similar to AA sequence:RefSeq:WP_014253892.1
GO:0046314 - phosphocreatine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014232.2
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: protein motif:HMM:NF021062.2
GO:0015234 - thiamine transmembrane transporter activity [Evidence IEA]
GO:0015888 - thiamine transport [Evidence IEA]
energy-coupled thiamine transporter ThiT
COORDINATES: similar to AA sequence:RefSeq:WP_003511672.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_020074171.1
GO:0003690 - double-stranded DNA binding [Evidence IEA]
small, acid-soluble spore protein, alpha/beta type
COORDINATES: similar to AA sequence:RefSeq:WP_012425203.1
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: protein motif:HMM:NF024810.2
COORDINATES: protein motif:HMM:NF019976.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
nuclease-related domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006520470.1
COORDINATES: similar to AA sequence:RefSeq:WP_013655189.1
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: similar to AA sequence:RefSeq:WP_015520936.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009461945.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008977357.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_013174788.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016148264.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_015515041.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_004035690.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_010074952.1
COORDINATES: similar to AA sequence:RefSeq:WP_003442745.1
COORDINATES: similar to AA sequence:RefSeq:WP_011639741.1
COORDINATES: protein motif:HMM:NF014164.2
GO:0004177 - aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008087735.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966435.1
COORDINATES: protein motif:HMM:NF013214.2
COORDINATES: protein motif:HMM:NF012382.2
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF039667.1
COORDINATES: protein motif:HMM:NF016763.2
GO:0071555 - cell wall organization [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014356508.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: protein motif:HMM:NF025064.2
COORDINATES: protein motif:HMM:NF018649.2
COORDINATES: similar to AA sequence:RefSeq:WP_013360887.1
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: similar to AA sequence:RefSeq:WP_009267107.1
COORDINATES: protein motif:HMM:NF025702.2
COORDINATES: similar to AA sequence:RefSeq:WP_014901752.1
COORDINATES: similar to AA sequence:RefSeq:WP_012048412.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydE
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005609701.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_010963563.1
COORDINATES: similar to AA sequence:RefSeq:WP_015044876.1
COORDINATES: similar to AA sequence:RefSeq:WP_012424347.1
COORDINATES: protein motif:HMM:NF027433.2
COORDINATES: similar to AA sequence:RefSeq:WP_019214590.1
COORDINATES: protein motif:HMM:NF019325.2
COORDINATES: protein motif:HMM:NF016159.2
COORDINATES: protein motif:HMM:NF017328.2
Ger(x)C family spore germination C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF027338.2
carbohydrate-binding family 9-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_003400051.1
GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA]
GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065210.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_009002621.1
COORDINATES: similar to AA sequence:RefSeq:WP_007858932.1
COORDINATES: similar to AA sequence:RefSeq:WP_004617183.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358742.1
COORDINATES: similar to AA sequence:RefSeq:WP_009254633.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059185.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021537.2
predicted Zn-dependent protease with a strongly conserved HExxH motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
DUF2268 domain-containing putative Zn-dependent protease
COORDINATES: similar to AA sequence:RefSeq:WP_008907857.1
COORDINATES: similar to AA sequence:RefSeq:WP_014828997.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: protein motif:HMM:TIGR03168.1
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015358014.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064812.1
COORDINATES: protein motif:HMM:NF019896.2
COORDINATES: similar to AA sequence:RefSeq:WP_013281091.1
COORDINATES: similar to AA sequence:RefSeq:WP_004630399.1
COORDINATES: similar to AA sequence:RefSeq:WP_002596022.1
arabinose ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006873670.1
COORDINATES: protein motif:HMM:NF014600.2
COORDINATES: protein motif:HMM:NF016432.2
COORDINATES: similar to AA sequence:RefSeq:WP_013721033.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355105.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355103.1
COORDINATES: similar to AA sequence:RefSeq:WP_006781714.1
COORDINATES: protein motif:HMM:NF025050.2
COORDINATES: similar to AA sequence:RefSeq:WP_008723912.1
COORDINATES: similar to AA sequence:RefSeq:WP_007494255.1
COORDINATES: similar to AA sequence:RefSeq:WP_002587497.1
COORDINATES: similar to AA sequence:RefSeq:WP_016293312.1
COORDINATES: similar to AA sequence:RefSeq:WP_005360300.1
COORDINATES: similar to AA sequence:RefSeq:WP_014254530.1
1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:TIGR00176.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF028488.2
COORDINATES: protein motif:HMM:NF024644.2
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: similar to AA sequence:RefSeq:WP_015391246.1
COORDINATES: protein motif:HMM:NF025198.2
COORDINATES: protein motif:HMM:NF022281.2
COORDINATES: similar to AA sequence:RefSeq:WP_004631199.1
COORDINATES: similar to AA sequence:RefSeq:WP_014357648.1
COORDINATES: similar to AA sequence:RefSeq:WP_017894978.1
COORDINATES: similar to AA sequence:RefSeq:WP_013822987.1
COORDINATES: similar to AA sequence:RefSeq:WP_007064351.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120541.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: similar to AA sequence:RefSeq:WP_004621910.1
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_006864565.1
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004622738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012058714.1
COORDINATES: protein motif:HMM:NF014649.2
COORDINATES: protein motif:HMM:NF014753.2
COORDINATES: protein motif:HMM:TIGR02365.1
COORDINATES: similar to AA sequence:RefSeq:WP_006565868.1
COORDINATES: similar to AA sequence:RefSeq:WP_006783136.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
BglG family transcription antiterminator
COORDINATES: similar to AA sequence:RefSeq:WP_003544256.1
COORDINATES: similar to AA sequence:RefSeq:WP_003431795.1
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016356.2
DUF523 and DUF1722 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015536935.1
COORDINATES: similar to AA sequence:RefSeq:WP_003470931.1
COORDINATES: similar to AA sequence:RefSeq:WP_003450734.1
COORDINATES: protein motif:HMM:NF014664.2
COORDINATES: similar to AA sequence:RefSeq:WP_010966295.1
DUF2161 family putative PD-(D/E)XK-type phosphodiesterase
COORDINATES: protein motif:HMM:NF025338.2
COORDINATES: protein motif:HMM:NF018234.2
COORDINATES: similar to AA sequence:RefSeq:WP_015390918.1
COORDINATES: similar to AA sequence:RefSeq:WP_003358165.1
TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein
COORDINATES: protein motif:HMM:NF013346.2
COORDINATES: similar to AA sequence:RefSeq:WP_016207511.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019200 - carbohydrate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015358974.1
COORDINATES: protein motif:HMM:NF016668.2
COORDINATES: similar to AA sequence:RefSeq:WP_017415236.1
COORDINATES: similar to AA sequence:RefSeq:WP_007064175.1
COORDINATES: similar to AA sequence:RefSeq:WP_013824322.1
COORDINATES: similar to AA sequence:RefSeq:WP_006523410.1
COORDINATES: similar to AA sequence:RefSeq:WP_013809593.1
COORDINATES: protein motif:HMM:NF024988.2
COORDINATES: similar to AA sequence:RefSeq:WP_003440894.1
COORDINATES: similar to AA sequence:RefSeq:WP_009251687.1
COORDINATES: similar to AA sequence:RefSeq:WP_019850568.1
COORDINATES: protein motif:HMM:NF019428.2
COORDINATES: protein motif:HMM:NF039199.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198963.1
COORDINATES: protein motif:HMM:NF025934.2
GO:0047487 - oligogalacturonide lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009252698.1
COORDINATES: similar to AA sequence:RefSeq:WP_011196943.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358586.1
COORDINATES: similar to AA sequence:RefSeq:WP_015358585.1
COORDINATES: similar to AA sequence:RefSeq:WP_004623869.1
COORDINATES: similar to AA sequence:RefSeq:WP_009254351.1
COORDINATES: protein motif:HMM:NF020897.2
COORDINATES: similar to AA sequence:RefSeq:WP_008909025.1
COORDINATES: similar to AA sequence:RefSeq:WP_010166171.1
COORDINATES: similar to AA sequence:RefSeq:WP_009268572.1
GO:0004146 - dihydrofolate reductase activity [Evidence IEA]
GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009204010.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: similar to AA sequence:RefSeq:WP_009253931.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014078970.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362038.1
COORDINATES: similar to AA sequence:RefSeq:WP_015513653.1
replication-associated recombination protein A
COORDINATES: protein motif:HMM:NF014080.2
COORDINATES: similar to AA sequence:RefSeq:WP_009168971.1
COORDINATES: similar to AA sequence:RefSeq:WP_017417161.1
COORDINATES: similar to AA sequence:RefSeq:WP_014254878.1
COORDINATES: similar to AA sequence:RefSeq:WP_009325909.1
COORDINATES: similar to AA sequence:RefSeq:WP_013270849.1
COORDINATES: similar to AA sequence:RefSeq:WP_012064861.1
COORDINATES: similar to AA sequence:RefSeq:WP_011195910.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_013270840.1
COORDINATES: protein motif:HMM:NF027656.2
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: similar to AA sequence:RefSeq:WP_009254199.1
COORDINATES: similar to AA sequence:RefSeq:WP_019662616.1
COORDINATES: similar to AA sequence:RefSeq:WP_009253375.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657922.1
COORDINATES: similar to AA sequence:RefSeq:WP_011721840.1
COORDINATES: similar to AA sequence:RefSeq:WP_004223314.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00558
ribosomal protein L20 leader region; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003431012.1
COORDINATES: similar to AA sequence:RefSeq:WP_005333086.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017209755.1
COORDINATES: protein motif:HMM:NF033749.1
COORDINATES: protein motif:HMM:NF036521.2
COORDINATES: similar to AA sequence:RefSeq:WP_002601763.1
COORDINATES: protein motif:HMM:NF023020.2
COORDINATES: similar to AA sequence:RefSeq:WP_014253820.1
COORDINATES: similar to AA sequence:RefSeq:WP_004630001.1
COORDINATES: similar to AA sequence:RefSeq:WP_005806232.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657058.1
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: similar to AA sequence:RefSeq:WP_002584758.1
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008369604.1
COORDINATES: similar to AA sequence:RefSeq:WP_009429835.1
COORDINATES: similar to AA sequence:RefSeq:WP_004605660.1
COORDINATES: protein motif:HMM:TIGR02785.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO:0000724 - double-strand break repair via homologous recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF019614.2
COORDINATES: similar to AA sequence:RefSeq:WP_008676385.1
COORDINATES: similar to AA sequence:RefSeq:WP_013624589.1
COORDINATES: similar to AA sequence:RefSeq:WP_013382707.1
COORDINATES: similar to AA sequence:RefSeq:WP_016359807.1
COORDINATES: similar to AA sequence:RefSeq:WP_009251684.1
COORDINATES: similar to AA sequence:RefSeq:WP_006778161.1
COORDINATES: similar to AA sequence:RefSeq:WP_015360090.1
COORDINATES: similar to AA sequence:RefSeq:WP_015360091.1
COORDINATES: protein motif:HMM:NF014093.2
COORDINATES: similar to AA sequence:RefSeq:WP_007719743.1
COORDINATES: similar to AA sequence:RefSeq:WP_003503869.1
COORDINATES: protein motif:HMM:NF013647.2
GO:0033179 - proton-transporting V-type ATPase, V0 domain [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATPase 116kDa subunit family protein
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: similar to AA sequence:RefSeq:WP_011986587.1
COORDINATES: protein motif:HMM:TIGR02773.1
COORDINATES: similar to AA sequence:RefSeq:WP_002582123.1
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:TIGR00147.1
GO:0001727 - lipid kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: protein motif:HMM:NF024914.2
COORDINATES: similar to AA sequence:RefSeq:WP_013724932.1
COORDINATES: similar to AA sequence:RefSeq:WP_015392068.1
COORDINATES: similar to AA sequence:RefSeq:WP_004623728.1
COORDINATES: similar to AA sequence:RefSeq:WP_004623741.1
COORDINATES: protein motif:HMM:NF025089.2
COORDINATES: similar to AA sequence:RefSeq:WP_003407068.1
COORDINATES: similar to AA sequence:RefSeq:WP_013821842.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009888049.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016439998.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010966811.1
COORDINATES: similar to AA sequence:RefSeq:WP_017826503.1
COORDINATES: similar to AA sequence:RefSeq:WP_008726705.1
COORDINATES: protein motif:HMM:NF012271.2
dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020488062.1
COORDINATES: similar to AA sequence:RefSeq:WP_009290400.1
COORDINATES: similar to AA sequence:RefSeq:WP_003421047.1
PLDc N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016280896.1
COORDINATES: protein motif:HMM:NF007497.0
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009003749.1
COORDINATES: similar to AA sequence:RefSeq:WP_010168552.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073858.1
COORDINATES: similar to AA sequence:RefSeq:WP_017415033.1
COORDINATES: similar to AA sequence:RefSeq:WP_008718891.1
COORDINATES: similar to AA sequence:RefSeq:WP_017415035.1
COORDINATES: similar to AA sequence:RefSeq:WP_012200077.1
COORDINATES: similar to AA sequence:RefSeq:WP_004620975.1
COORDINATES: protein motif:HMM:NF018645.2
COORDINATES: similar to AA sequence:RefSeq:WP_004624496.1
COORDINATES: similar to AA sequence:RefSeq:WP_004624908.1
COORDINATES: similar to AA sequence:RefSeq:WP_009002501.1
COORDINATES: protein motif:HMM:NF019845.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003156785.1
GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012428.2
COORDINATES: protein motif:HMM:NF037917.2
PBECR2 nuclease fold domain-containing protein
COORDINATES: protein motif:HMM:NF022337.2
COORDINATES: protein motif:HMM:NF017518.2
zonular occludens toxin domain-containing protein
COORDINATES: protein motif:HMM:NF025826.2
COORDINATES: protein motif:HMM:NF027405.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence IEA]
peptidoglycan recognition family protein
COORDINATES: protein motif:HMM:NF022117.2
BppU family phage baseplate upper protein
COORDINATES: protein motif:HMM:TIGR01760.1
GO:0016032 - viral process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01563.1
GO:0044423 - virion component [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01560.2
COORDINATES: protein motif:HMM:TIGR01554.2
COORDINATES: similar to AA sequence:RefSeq:WP_011100284.1
COORDINATES: similar to AA sequence:RefSeq:WP_010074665.1
COORDINATES: similar to AA sequence:RefSeq:WP_011968249.1
COORDINATES: similar to AA sequence:RefSeq:WP_010074667.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063536.1
COORDINATES: similar to AA sequence:RefSeq:WP_012720308.1
COORDINATES: similar to AA sequence:RefSeq:WP_013291898.1
COORDINATES: similar to AA sequence:RefSeq:WP_003492238.1
COORDINATES: similar to AA sequence:RefSeq:WP_010965246.1
COORDINATES: similar to AA sequence:RefSeq:WP_016438768.1
COORDINATES: protein motif:HMM:NF022027.2
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: similar to AA sequence:RefSeq:WP_013655962.1
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: similar to AA sequence:RefSeq:WP_012158340.1
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017751442.1
COORDINATES: similar to AA sequence:RefSeq:WP_004077546.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_004613723.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004613722.1
COORDINATES: similar to AA sequence:RefSeq:WP_011099558.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025038.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160307.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004065044.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_008705880.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:NF025675.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF015953.2
COORDINATES: similar to AA sequence:RefSeq:WP_014357699.1
COORDINATES: similar to AA sequence:RefSeq:WP_002601519.1
GO:0003729 - mRNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012201854.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038716.1
COORDINATES: protein motif:HMM:TIGR02535.1
cofactor-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_009289915.1
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002566467.1
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: similar to AA sequence:RefSeq:WP_132283257.1
GO:0003747 - translation release factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009460416.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039641.1
COORDINATES: similar to AA sequence:RefSeq:WP_016296289.1
COORDINATES: similar to AA sequence:RefSeq:WP_015924529.1
GO:0042806 - fucose binding [Evidence IEA]; GO:0016854 - racemase and epimerase activity [Evidence IEA]
GO:0042354 - L-fucose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016205727.1
COORDINATES: similar to AA sequence:RefSeq:WP_009203625.1
COORDINATES: similar to AA sequence:RefSeq:WP_020816796.1
COORDINATES: similar to AA sequence:RefSeq:WP_017210275.1
COORDINATES: similar to AA sequence:RefSeq:WP_004618431.1
COORDINATES: similar to AA sequence:RefSeq:WP_004850288.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_014903410.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060145.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657395.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657396.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062595.1
COORDINATES: protein motif:HMM:NF012239.2
COORDINATES: similar to AA sequence:RefSeq:WP_012740030.1
COORDINATES: similar to AA sequence:RefSeq:WP_006441955.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF036497.2
COORDINATES: protein motif:HMM:NF038347.1
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_014253850.1
COORDINATES: similar to AA sequence:RefSeq:WP_002566963.1
COORDINATES: similar to AA sequence:RefSeq:WP_013271512.1
COORDINATES: similar to AA sequence:RefSeq:WP_007884888.1
COORDINATES: similar to AA sequence:RefSeq:WP_004038728.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:TIGR03609.1
GO:0046919 - pyruvyltransferase activity [Evidence IEA]
GO:0042545 - cell wall modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: similar to AA sequence:RefSeq:WP_003495087.1
COORDINATES: similar to AA sequence:RefSeq:WP_003512799.1
COORDINATES: protein motif:HMM:TIGR00350.1
GO:0070726 - cell wall assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012199334.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002587455.1
COORDINATES: protein motif:HMM:NF015995.2
COORDINATES: similar to AA sequence:RefSeq:WP_011986981.1
COORDINATES: protein motif:HMM:NF039343.1
CpsB/CapC family capsule biosynthesis tyrosine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_011971419.1
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
GO:0008755 - O antigen polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014409.2
COORDINATES: protein motif:HMM:NF015087.2
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
N-acetylneuraminate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013658540.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525641.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257107.1
COORDINATES: similar to AA sequence:RefSeq:WP_009525639.1
COORDINATES: similar to AA sequence:RefSeq:WP_008516474.1
COORDINATES: similar to AA sequence:RefSeq:WP_003497494.1
COORDINATES: similar to AA sequence:RefSeq:WP_003497495.1
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003497496.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198363.1
COORDINATES: similar to AA sequence:RefSeq:WP_006862778.1
COORDINATES: similar to AA sequence:RefSeq:WP_013657901.1
COORDINATES: similar to AA sequence:RefSeq:WP_006855231.1
COORDINATES: similar to AA sequence:RefSeq:WP_004847596.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004625308.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971259.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003487170.1
COORDINATES: similar to AA sequence:RefSeq:WP_003355830.1
COORDINATES: similar to AA sequence:RefSeq:WP_011196280.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059285.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02152.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006355463.1
GO:0050263 - ribosylpyrimidine nucleosidase activity [Evidence IEA]
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
pyrimidine-specific ribonucleoside hydrolase RihA
COORDINATES: similar to AA sequence:RefSeq:WP_006781295.1
COORDINATES: similar to AA sequence:RefSeq:WP_019160688.1
COORDINATES: similar to AA sequence:RefSeq:WP_002576811.1
COORDINATES: similar to AA sequence:RefSeq:WP_004034868.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-ribosylglycohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015533435.1
indolepyruvate oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_008401119.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010966757.1
COORDINATES: similar to AA sequence:RefSeq:WP_003540768.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013343673.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004625316.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011721561.1
COORDINATES: protein motif:HMM:TIGR02290.1
COORDINATES: similar to AA sequence:RefSeq:WP_014902380.1
FeoB-associated Cys-rich membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_005945643.1
COORDINATES: similar to AA sequence:RefSeq:WP_014183927.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514690.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198358.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003501885.1
GO:0009381 - excinuclease ABC activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008907808.1
COORDINATES: similar to AA sequence:RefSeq:WP_009254345.1
COORDINATES: similar to AA sequence:RefSeq:WP_020457874.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: similar to AA sequence:RefSeq:WP_006774431.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010248440.1
COORDINATES: protein motif:HMM:NF014109.2
GO:0008810 - cellulase activity [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015926766.1
COORDINATES: protein motif:HMM:TIGR00229.1
hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:NF024754.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013381901.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
putative manganese-dependent inorganic diphosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_010250254.1
COORDINATES: similar to AA sequence:RefSeq:WP_010250256.1
COORDINATES: protein motif:HMM:NF025387.2
This protein contains a domain related to Tuberculosis Necrotizing Toxin, which is the C-terminal effector domain of outer membrane channel protein CpnT, and which has a lethal NAD+-glycohydrolase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
glycohydrolase toxin TNT-related protein
COORDINATES: protein motif:HMM:TIGR03928.1
COORDINATES: similar to AA sequence:RefSeq:WP_009258753.1
accessory gene regulator B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006717181.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514284.1
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004631078.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012342769.1
GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013237097.1
COORDINATES: similar to AA sequence:RefSeq:WP_011723156.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012062279.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_015613614.1
GO:0004746 - riboflavin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005211228.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: protein motif:HMM:TIGR01140.1
GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160056.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_014079962.1
COORDINATES: protein motif:HMM:NF016623.2
divergent polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009444849.1
COORDINATES: similar to AA sequence:RefSeq:WP_004630879.1
phosphoglucomutase/phosphomannomutase family protein
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: protein motif:HMM:TIGR01512.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006441109.1
COORDINATES: similar to AA sequence:RefSeq:WP_009462000.1
COORDINATES: protein motif:HMM:NF017856.2
COORDINATES: similar to AA sequence:RefSeq:WP_013655748.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073498.1
COORDINATES: similar to AA sequence:RefSeq:WP_012199532.1
COORDINATES: protein motif:HMM:NF012581.2
COORDINATES: similar to AA sequence:RefSeq:WP_003491199.1
COORDINATES: similar to AA sequence:RefSeq:WP_003491197.1
COORDINATES: similar to AA sequence:RefSeq:WP_015616971.1
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008908974.1
GO:0000030 - mannosyltransferase activity [Evidence IEA]
GO:0006493 - protein O-linked glycosylation [Evidence IEA]
phospholipid carrier-dependent glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015263340.1
COORDINATES: protein motif:HMM:NF008687.0
GO:0019180 - dTDP-4-amino-4,6-dideoxygalactose transaminase activity [Evidence IEA]
GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
dTDP-4-amino-4,6-dideoxygalactose transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_014356615.1
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_013361648.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003867363.1
COORDINATES: similar to AA sequence:RefSeq:WP_002603121.1
COORDINATES: similar to AA sequence:RefSeq:WP_013272213.1
COORDINATES: similar to AA sequence:RefSeq:WP_005609324.1
COORDINATES: similar to AA sequence:RefSeq:WP_015617916.1
COORDINATES: similar to AA sequence:RefSeq:WP_004624676.1
COORDINATES: similar to AA sequence:RefSeq:WP_015359268.1
COORDINATES: similar to AA sequence:RefSeq:WP_003447068.1
COORDINATES: similar to AA sequence:RefSeq:WP_010252332.1
COORDINATES: similar to AA sequence:RefSeq:WP_014521849.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015614869.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009247119.1
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_014254381.1
GO:0004071 - aspartate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025354.2
COORDINATES: protein motif:HMM:NF016895.2
COORDINATES: similar to AA sequence:RefSeq:WP_006440978.1
COORDINATES: protein motif:HMM:NF021553.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00379
cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_008419899.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291463.1
COORDINATES: similar to AA sequence:RefSeq:WP_007063169.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013841473.1
COORDINATES: protein motif:HMM:NF028235.2
COORDINATES: protein motif:HMM:NF024304.2
COORDINATES: similar to AA sequence:RefSeq:WP_005813164.1
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF020039.2
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014903705.1
GO:0016862 - intramolecular oxidoreductase activity, interconverting keto- and enol-groups [Evidence IEA]
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009248961.1
COORDINATES: similar to AA sequence:RefSeq:WP_003417012.1
COORDINATES: similar to AA sequence:RefSeq:WP_011099010.1
COORDINATES: similar to AA sequence:RefSeq:WP_006861679.1
COORDINATES: similar to AA sequence:RefSeq:WP_013382617.1
COORDINATES: similar to AA sequence:RefSeq:WP_015514631.1
COORDINATES: protein motif:HMM:NF024076.2
COORDINATES: protein motif:HMM:TIGR01182.1
COORDINATES: similar to AA sequence:RefSeq:WP_002573000.1
GO:0008869 - galactonate dehydratase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004631087.1
COORDINATES: similar to AA sequence:RefSeq:WP_009003736.1
COORDINATES: similar to AA sequence:RefSeq:WP_010167139.1
COORDINATES: similar to AA sequence:RefSeq:WP_010168464.1
COORDINATES: protein motif:HMM:TIGR00016.1
COORDINATES: similar to AA sequence:RefSeq:WP_003422012.1
COORDINATES: similar to AA sequence:RefSeq:WP_003422014.1
COORDINATES: protein motif:HMM:NF014899.2
COORDINATES: similar to AA sequence:RefSeq:WP_010964730.1
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_010167764.1
COORDINATES: protein motif:HMM:NF037677.2
COORDINATES: similar to AA sequence:RefSeq:WP_010073501.1
COORDINATES: similar to AA sequence:RefSeq:WP_016208139.1
COORDINATES: similar to AA sequence:RefSeq:WP_009219944.1
COORDINATES: similar to AA sequence:RefSeq:WP_016280217.1
COORDINATES: similar to AA sequence:RefSeq:WP_007783238.1
COORDINATES: protein motif:HMM:TIGR02494.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198983.1
COORDINATES: similar to AA sequence:RefSeq:WP_007782454.1
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: similar to AA sequence:RefSeq:WP_015924795.1
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: similar to AA sequence:RefSeq:WP_010233663.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: protein motif:HMM:NF012880.2
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_002584892.1
COORDINATES: similar to AA sequence:RefSeq:WP_006778546.1
COORDINATES: similar to AA sequence:RefSeq:WP_009257143.1
COORDINATES: similar to AA sequence:RefSeq:WP_006778544.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360968.1
anaerobic nitric oxide reductase flavorubredoxin
COORDINATES: similar to AA sequence:RefSeq:WP_015358726.1
COORDINATES: protein motif:HMM:NF018991.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063197.1
COORDINATES: protein motif:HMM:NF024785.2
COORDINATES: protein motif:HMM:NF017755.2
COORDINATES: similar to AA sequence:RefSeq:WP_012063188.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063187.1
COORDINATES: similar to AA sequence:RefSeq:WP_012063186.1
COORDINATES: similar to AA sequence:RefSeq:WP_010168797.1
COORDINATES: similar to AA sequence:RefSeq:WP_005427666.1
COORDINATES: similar to AA sequence:RefSeq:WP_009003722.1
COORDINATES: similar to AA sequence:RefSeq:WP_013120125.1
COORDINATES: protein motif:HMM:NF021886.2
COORDINATES: protein motif:HMM:NF039515.1
COORDINATES: protein motif:HMM:NF013772.2
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF025636.2
COORDINATES: similar to AA sequence:RefSeq:WP_002602106.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541825.1
COORDINATES: similar to AA sequence:RefSeq:WP_015541826.1
COORDINATES: similar to AA sequence:RefSeq:WP_015515071.1
COORDINATES: similar to AA sequence:RefSeq:WP_012704045.1
COORDINATES: similar to AA sequence:RefSeq:WP_016147445.1
COORDINATES: similar to AA sequence:RefSeq:WP_009529657.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018597287.1
COORDINATES: similar to AA sequence:RefSeq:WP_012199656.1
COORDINATES: similar to AA sequence:RefSeq:WP_008751866.1
GO:0008452 - RNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009903090.1
COORDINATES: protein motif:HMM:NF025839.2
COORDINATES: similar to AA sequence:RefSeq:WP_014078622.1
methionine adenosyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007858547.1
COORDINATES: similar to AA sequence:RefSeq:WP_009251756.1
COORDINATES: similar to AA sequence:RefSeq:WP_002605538.1
COORDINATES: similar to AA sequence:RefSeq:WP_004625629.1
COORDINATES: similar to AA sequence:RefSeq:WP_015394929.1
COORDINATES: similar to AA sequence:RefSeq:WP_010075259.1
COORDINATES: similar to AA sequence:RefSeq:WP_012201164.1
GO:0046559 - alpha-glucuronidase activity [Evidence IEA]
GO:0045493 - xylan catabolic process [Evidence IEA]
alpha-glucuronidase family glycosyl hydrolase
COORDINATES: protein motif:HMM:NF007940.0
COORDINATES: similar to AA sequence:RefSeq:WP_006856511.1
COORDINATES: similar to AA sequence:RefSeq:WP_006856510.1
COORDINATES: similar to AA sequence:RefSeq:WP_015391947.1
COORDINATES: similar to AA sequence:RefSeq:WP_005816008.1
COORDINATES: similar to AA sequence:RefSeq:WP_007049174.1
COORDINATES: protein motif:HMM:NF023335.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160687.1
COORDINATES: similar to AA sequence:RefSeq:WP_010075258.1
COORDINATES: protein motif:HMM:NF024039.2
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: similar to AA sequence:RefSeq:WP_015358699.1
COORDINATES: protein motif:HMM:NF037374.2
COORDINATES: similar to AA sequence:RefSeq:WP_006575259.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002569697.1
COORDINATES: similar to AA sequence:RefSeq:WP_006444812.1
COORDINATES: similar to AA sequence:RefSeq:WP_010249803.1
COORDINATES: similar to AA sequence:RefSeq:WP_006782696.1
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: similar to AA sequence:RefSeq:WP_013360618.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013656245.1
COORDINATES: protein motif:HMM:NF028222.2
COORDINATES: similar to AA sequence:RefSeq:WP_008719194.1
COORDINATES: similar to AA sequence:RefSeq:WP_002568849.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: protein motif:HMM:NF014427.2
COORDINATES: protein motif:HMM:NF037021.2
COORDINATES: similar to AA sequence:RefSeq:WP_006864194.1
COORDINATES: similar to AA sequence:RefSeq:WP_004629916.1
COORDINATES: similar to AA sequence:RefSeq:WP_003509752.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008116673.1
COORDINATES: similar to AA sequence:RefSeq:WP_003512660.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012198184.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008175 - tRNA methyltransferase activity [Evidence IEA]
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012740078.1
COORDINATES: similar to AA sequence:RefSeq:WP_009001543.1
COORDINATES: similar to AA sequence:RefSeq:WP_010965922.1
COORDINATES: similar to AA sequence:RefSeq:WP_012198182.1
COORDINATES: similar to AA sequence:RefSeq:WP_013271088.1
COORDINATES: similar to AA sequence:RefSeq:WP_009289283.1
COORDINATES: protein motif:HMM:NF016202.2
COORDINATES: similar to AA sequence:RefSeq:WP_003378260.1
COORDINATES: protein motif:HMM:NF008865.0
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009203342.1
COORDINATES: protein motif:HMM:TIGR00573.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: similar to AA sequence:RefSeq:WP_012200401.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009250957.1
COORDINATES: similar to AA sequence:RefSeq:WP_002574010.1
COORDINATES: similar to AA sequence:RefSeq:WP_010965697.1
GO:0005829 - cytosol [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA]
GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity [Evidence IEA]; GO:0008413 - 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity [Evidence IEA]; GO:0003986 - acetyl-CoA hydrolase activity [Evidence IEA]; GO:0010945 - CoA pyrophosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0015938 - coenzyme A catabolic process [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009132 - nucleoside diphosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009247179.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004221234.1
B12-binding domain-containing radical SAM protein
GO:0042834 - peptidoglycan binding [Evidence IEA]; GO:0071972 - peptidoglycan L,D-transpeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013721043.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003369001.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059485.1
COORDINATES: protein motif:HMM:NF012470.2
COORDINATES: protein motif:HMM:NF021583.2
COORDINATES: protein motif:HMM:NF016736.2
COORDINATES: protein motif:HMM:NF022387.2
COORDINATES: protein motif:HMM:NF022300.2
COORDINATES: similar to AA sequence:RefSeq:WP_002602991.1
COORDINATES: protein motif:HMM:NF020464.2
COORDINATES: similar to AA sequence:RefSeq:WP_012100315.1
COORDINATES: similar to AA sequence:RefSeq:WP_014793014.1
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: similar to AA sequence:RefSeq:WP_007061601.1
COORDINATES: protein motif:HMM:NF021534.2
COORDINATES: similar to AA sequence:RefSeq:WP_010297402.1
COORDINATES: protein motif:HMM:NF023178.2
COORDINATES: protein motif:HMM:NF027589.2
COORDINATES: similar to AA sequence:RefSeq:WP_002580450.1