Streptococcus parauberis strain SPOF3K plasmid unnamed, complete sequence.
type: Entry
definition: Streptococcus parauberis strain SPOF3K plasmid unnamed, complete sequence.
sequence version: NZ_CP025421.1
sequence date: 2022-12-08
sequence: sequence
division: CON
label: NZ_CP025421.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN08180797
keyword: RefSeq
source: Streptococcus parauberis
organism: Streptococcus parauberis
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP025421.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2017\nAssembly Method :: other v. 2.30\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 703.34x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 00:12:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,217\nCDSs (total) :: 2,126\nGenes (coding) :: 2,057\nCDSs (with protein) :: 2,057\nGenes (RNA) :: 91\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 69\nncRNAs :: 4\nPseudo Genes (total) :: 69\nCDSs (without protein) :: 69\nPseudo Genes (ambiguous residues) :: 0 of 69\nPseudo Genes (frameshifted) :: 22 of 69\nPseudo Genes (incomplete) :: 40 of 69\nPseudo Genes (internal stop) :: 17 of 69\nPseudo Genes (multiple problems) :: 8 of 69\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 23538
topology: circular
so has quality: SO_0000988
location: 1..23538
location: region:1-23538:1
RO_0002162: 1348

NZ_CP025421
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN08180797
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence Streptococcus parauberis SPOF3K
author: Lee, Y.
author: Kim, D.-H.
journal: Unpublished

2
title: Direct Submission
author: Lee, Y.
author: Kim, D.-H.
journal: Submitted (15-JAN-2018) Department of Aquatic Life Medicine, Pukyong National University, 45 Yonso-ro, Namgu, Busan KS012, Korea, Republic of

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

position:23538:1
position: 23538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition
type: FuzzyPosition

feature:1-23538:1:source
so part of: sequence
organism: Streptococcus parauberis
mol type: genomic DNA
strain: SPOF3K
host: Paralichthys olivaceus
plasmid: unnamed
country: South Korea: Geojedo
collection date: 2013

1348
type: Taxonomy
SIO_000068: taxonomy

SPSF3K_RS10925
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
gene: tet(S)
locus tag: SPSF3K_RS10925
old locus tag: SPSF3K_02211
pseudo: true
so part of: sequence
location: join(<23538,1..1466)
location: region:1-23538:1
so has part: feature:23538-23538:1:exon
so has part: feature:1-1466:1:exon
subclass of: SO_0000010

66817178
type: Gene
SIO_000068: ncbigene

urn:…
SIO_000300: 1
SIO_000628: feature:23538-23538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1466:1:exon

position:1466:1
position: 1466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPSF3K_RS10925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
gene: tet(S)
locus tag: SPSF3K_RS10925
old locus tag: SPSF3K_02211
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011997530.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tetracycline resistance ribosomal protection protein Tet(S)
SIO_010081: SPSF3K_RS10925
subclass of: SO_0000673
so part of: SPSF3K_RS10925
location: join(<23538,1..1466)
location: region:1-23538:1
so has part: feature:23538-23538:1:exon
so has part: feature:1-1466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23538-23538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1466:1:exon

SPSF3K_RS10940
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS10940
old locus tag: SPSF3K_02213
so part of: sequence
location: complement(1716..2303)
location: region:1716-2303:-1
so has part: feature:1716-2303:-1:exon
subclass of: SO_0000010

66817180
type: Gene
SIO_000068: ncbigene

position:1716:-1
position: 1716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2303:-1
position: 2303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1716-2303:-1:exon

SPSF3K_RS10940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS10940
old locus tag: SPSF3K_02213
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014386284.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF536 domain-containing protein
translation: MSENLKTIKELADEFNVSKQAVRKRLTEEFRANHVETVTSNGVKTLVVTYTGYMLLKQHFTTSNVTGNDKVTDTSNPTTGDLSVVKILEQQLFVKDKQLENKDSQISQMQNLLDQQQRLALQDKKLLEEYKSENDRLKVLKMPSQETEFKHLDNQYKDEVNALKEKLENLQEQIKVKKRIEEQEKQRKWWGLWRK
SIO_010081: SPSF3K_RS10940
subclass of: SO_0000673
so part of: SPSF3K_RS10940
location: complement(1716..2303)
location: region:1716-2303:-1
so has part: feature:1716-2303:-1:exon

WP_003109091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1716-2303:-1:exon

SPSF3K_RS10945
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS10945
old locus tag: SPSF3K_02214
so part of: sequence
location: complement(2296..3621)
location: region:2296-3621:-1
so has part: feature:2296-3621:-1:exon
subclass of: SO_0000010

66817181
type: Gene
SIO_000068: ncbigene

position:2296:-1
position: 2296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3621:-1
position: 3621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2296-3621:-1:exon

SPSF3K_RS10945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS10945
old locus tag: SPSF3K_02214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003140515.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RepB family plasmid replication initiator protein
translation: MSSIPEKQENKKQVLTLNDLEKRKVVEHNSLITSIAKMQKTALKMFELAVSCIDTENLPENNTVYLSKKELFSFFEVSSSSKHSQFKEAIEFMQKQAYFKIKSNKALGIEYESIVPIPYVKWNDYNDEVTIQFSEHIMPYLINLKAEFTQYKISELQKLNSKYSIILYRWLAMNYNQYEHYSVKGGRRAEQVETYRNPSITVKELREITDTIKDYQKMSHFTTWVLEKPLEEINAHTSFNVSYEKVKKGRSIDSIVFHITKKPVARNDFYKLEEQDPIYLQDKAEREGKQQVLFTKAMQSPYTKLLGEKWLINFSDTQDIPTMVGLLEKVYPLYDELKEARGLKGVETHLSYVASKQEGYSKRNVVKYLKTAIEGYLPTVALQDLEQPERANYKKPRSLEEVAKDFLPDYQNETSEAEKEELRRLKAEIDKKLRGEGLDHE
SIO_010081: SPSF3K_RS10945
subclass of: SO_0000673
so part of: SPSF3K_RS10945
location: complement(2296..3621)
location: region:2296-3621:-1
so has part: feature:2296-3621:-1:exon

WP_003109089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2296-3621:-1:exon

SPSF3K_RS10950
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS10950
old locus tag: SPSF3K_02215
so part of: sequence
location: complement(4017..4619)
location: region:4017-4619:-1
so has part: feature:4017-4619:-1:exon
subclass of: SO_0000010

66817182
type: Gene
SIO_000068: ncbigene

position:4017:-1
position: 4017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4619:-1
position: 4619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4017-4619:-1:exon

SPSF3K_RS10950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS10950
old locus tag: SPSF3K_02215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016176895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MVLDNKLGLTNSAELAKQEEILTKTRAKELFESGKLDELEIGTFKGLSDIHQFLFQDIYDFAGKTREVNIAKGNFQFAPRIFLAQTLEYIDKLSQETFDEIIDKYSDMNVAHPFREGNGRATRIWLDLILKNKLGKIVDWNQIDKDEYLNAMIRSTVSTNELKYLIQEALTDDLGKKQFFKGIDASYYYEGYYEIKTEDL
SIO_010081: SPSF3K_RS10950
subclass of: SO_0000673
so part of: SPSF3K_RS10950
location: complement(4017..4619)
location: region:4017-4619:-1
so has part: feature:4017-4619:-1:exon

WP_003109087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4017-4619:-1:exon

SPSF3K_RS10955
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS10955
old locus tag: SPSF3K_02216
so part of: sequence
location: complement(4636..5259)
location: region:4636-5259:-1
so has part: feature:4636-5259:-1:exon
subclass of: SO_0000010

66817183
type: Gene
SIO_000068: ncbigene

position:4636:-1
position: 4636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5259:-1
position: 5259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4636-5259:-1:exon

SPSF3K_RS10955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS10955
old locus tag: SPSF3K_02216
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015543946.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKDEQLVVQVLNAYKNGKIDFSNVPELDRLVRQEVNKDFRDYQEKIEAVANQKIESAIQEQLHRLEAESLKADILKDIQVEKQALLALKKELNEQKEQIKADRKREIVERYGILIANIVCLFCFLVVSILIGRWIYKGIWDGWGLHILYDTVMEIRPKHPYGAVILGLGGFGLIGAGIYGSFRLMYTASTWFDQRPKIFKRIFPKK
SIO_010081: SPSF3K_RS10955
subclass of: SO_0000673
so part of: SPSF3K_RS10955
location: complement(4636..5259)
location: region:4636-5259:-1
so has part: feature:4636-5259:-1:exon

WP_003109085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4636-5259:-1:exon

SPSF3K_RS10960
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS10960
old locus tag: SPSF3K_02217
so part of: sequence
location: complement(5256..6488)
location: region:5256-6488:-1
so has part: feature:5256-6488:-1:exon
subclass of: SO_0000010

66817184
type: Gene
SIO_000068: ncbigene

position:5256:-1
position: 5256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6488:-1
position: 6488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5256-6488:-1:exon

SPSF3K_RS10960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS10960
old locus tag: SPSF3K_02217
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002339184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MATIAKISNGASAASALNYALGQDRPMHEKTEQWLQDHQLERPVELTNCRAVAVGGTNGIDPFIAKEQFDVVRQLHNQTKESNQVLRITQSFALDELNPKVQKDWQKANDLGVELAEKLYPNHQSAVYTHLDGKNHVLHNHIIVNKVNLETGNKLREQKGESVQRAREMNDRLASRENWHILEPPKERQTETEKELIAKNEYSYMNDLRERINKSLQDVSVSSYEAFKERLSDNGINISERGQTFSYAFLDANNKQRRARETRLGSDFGRETILHELENRARQNEFSAVEQREPAITPLERDTQQRESEIVSLEQAIEPRKSEALKRESKINRFIDTIKQFAGRVPELTQRVTRKLKQTKDKILDDFERRFSKDMKNYEKEQQKSLEKQANRDVQSEKKPTKDHDRGMSR
SIO_010081: SPSF3K_RS10960
subclass of: SO_0000673
so part of: SPSF3K_RS10960
location: complement(5256..6488)
location: region:5256-6488:-1
so has part: feature:5256-6488:-1:exon

WP_003109084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5256-6488:-1:exon

SPSF3K_RS10965
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
gene: mobC
locus tag: SPSF3K_RS10965
old locus tag: SPSF3K_02218
so part of: sequence
location: complement(6467..6832)
location: region:6467-6832:-1
so has part: feature:6467-6832:-1:exon
subclass of: SO_0000010

66817185
type: Gene
SIO_000068: ncbigene

position:6467:-1
position: 6467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6832:-1
position: 6832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6467-6832:-1:exon

SPSF3K_RS10965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
gene: mobC
locus tag: SPSF3K_RS10965
old locus tag: SPSF3K_02218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017369566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MDHKEVSQNQTKYIQFRLSEEQYNKLKISGETYGLSPNLYAKKLAQKSHLKKPYLEHDQAKALLLELSKQGTNLNQIAKKLNQFDRMDNQDEELIEALRYTYGVLAQAQKGYQELWQQLQK
SIO_010081: SPSF3K_RS10965
subclass of: SO_0000673
so part of: SPSF3K_RS10965
location: complement(6467..6832)
location: region:6467-6832:-1
so has part: feature:6467-6832:-1:exon

WP_003109082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6467-6832:-1:exon

SPSF3K_RS10975
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS10975
old locus tag: SPSF3K_02219
so part of: sequence
location: 7471..8151
location: region:7471-8151:1
so has part: feature:7471-8151:1:exon
subclass of: SO_0000010

66817186
type: Gene
SIO_000068: ncbigene

position:7471:1
position: 7471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8151:1
position: 8151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7471-8151:1:exon

SPSF3K_RS10975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS10975
old locus tag: SPSF3K_02219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MNHFKGKPFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKRLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRTKFYRSLRTASSTIKGMEAIRGLYKKTRKEGTLFGFSACTEIKVLLGIPA
SIO_010081: SPSF3K_RS10975
subclass of: SO_0000673
so part of: SPSF3K_RS10975
location: 7471..8151
location: region:7471-8151:1
so has part: feature:7471-8151:1:exon

WP_037620436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7471-8151:1:exon

SPSF3K_RS10980
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS10980
old locus tag: SPSF3K_02220
so part of: sequence
location: 8300..8827
location: region:8300-8827:1
so has part: feature:8300-8827:1:exon
subclass of: SO_0000010

66817187
type: Gene
SIO_000068: ncbigene

position:8300:1
position: 8300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8827:1
position: 8827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8300-8827:1:exon

SPSF3K_RS10980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS10980
old locus tag: SPSF3K_02220
EC number: 2.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005604994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family protein
translation: MIKTLETSRLQLRKMTISDSAEVFENWTSSEVVAKYLTWAPHSSLEVTEEYLSFEEKNRREGWGIVLKGSNQLIGNIAVIDDKEKIKTKTMGYVLGEKFWNQGYMSEALTRVINFLFETTDVNRIEAEHDVNNPSSGRVMKKSGMTFEGVLRNAGLNNQGIVDVAIYSILRSDLS
SIO_010081: SPSF3K_RS10980
subclass of: SO_0000673
so part of: SPSF3K_RS10980
location: 8300..8827
location: region:8300-8827:1
so has part: feature:8300-8827:1:exon

WP_003109076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8300-8827:1:exon

SPSF3K_RS10985
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS10985
old locus tag: SPSF3K_02221
so part of: sequence
location: complement(9001..9555)
location: region:9001-9555:-1
so has part: feature:9001-9555:-1:exon
subclass of: SO_0000010

66817188
type: Gene
SIO_000068: ncbigene

position:9001:-1
position: 9001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9555:-1
position: 9555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9001-9555:-1:exon

SPSF3K_RS10985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS10985
old locus tag: SPSF3K_02221
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003106713.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MNIGYARVSTGLQNLDLQKDSLEKYNCEKIFTDHMSGSKKERPGLKSAVEFSRPGDTIVVWRLDRLGRNMEDLINIVNSLNNKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNLILERSAAGRKAARARGRLGGRPEKFSEQDIKLLKTLVESGTPIKSIADSWGVSRTTIYRYINKF
SIO_010081: SPSF3K_RS10985
subclass of: SO_0000673
so part of: SPSF3K_RS10985
location: complement(9001..9555)
location: region:9001-9555:-1
so has part: feature:9001-9555:-1:exon

WP_003109075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9001-9555:-1:exon

SPSF3K_RS10990
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS10990
old locus tag: SPSF3K_02222
so part of: sequence
location: complement(9920..11122)
location: region:9920-11122:-1
so has part: feature:9920-11122:-1:exon
subclass of: SO_0000010

66817189
type: Gene
SIO_000068: ncbigene

position:9920:-1
position: 9920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11122:-1
position: 11122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9920-11122:-1:exon

SPSF3K_RS10990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS10990
old locus tag: SPSF3K_02222
inference: COORDINATES: protein motif:HMM:NF015347.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MucBP domain-containing protein
translation: MSYMFYQSKLTSLDVSQWNTSNVTDMLFMFVQSKLTSLDVSQWNTSNVTDMSLMFIQSKLTSLDVSQWNTSNVTDMEQMFAFSELTSLDLTNWDTSKVQNSYRMFFYTGIKKLTLGSKTKFNDSPELPHIDQSSGVYTGRWERIDPVSPQSFYNGSYDFMSKYDGSFPGTYVWEKTKVKAADVTAKYLDENGNTISDDVVKNGNVGDSYTTEQKAIPGYTFKAVQGNPTGQFTSDAQTVTYIYTKDPVAGGNVTVKYVDGAGGNTISDNVVKSGNIGDDYSTDQKAIPGYTFKEVQGSASGQFTDKEQTITYVYTKNSVTPVKPTEPGTTQTNENNTETPVKNTTNVSLHNNVSTLGSVSTTNEKSLPTTGEKPANWSVVVGGLITLTAATVLYLLKRKY
SIO_010081: SPSF3K_RS10990
subclass of: SO_0000673
so part of: SPSF3K_RS10990
location: complement(9920..11122)
location: region:9920-11122:-1
so has part: feature:9920-11122:-1:exon

WP_081247919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9920-11122:-1:exon

SPSF3K_RS10995
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS10995
pseudo: true
so part of: sequence
location: <11202..11357
location: region:11202-11357:1
so has part: feature:11202-11357:1:exon
subclass of: SO_0000010

66817190
type: Gene
SIO_000068: ncbigene

position:11202:1
position: 11202
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:11357:1
position: 11357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11202-11357:1:exon

SPSF3K_RS10995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS10995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002405436.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: conjugal transfer protein
SIO_010081: SPSF3K_RS10995
subclass of: SO_0000673
so part of: SPSF3K_RS10995
location: <11202..11357
location: region:11202-11357:1
so has part: feature:11202-11357:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11202-11357:1:exon

SPSF3K_RS11005
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
gene: tet(S)
locus tag: SPSF3K_RS11005
old locus tag: SPSF3K_02223
so part of: sequence
location: 12201..14126
location: region:12201-14126:1
so has part: feature:12201-14126:1:exon
subclass of: SO_0000010

66817191
type: Gene
SIO_000068: ncbigene

position:12201:1
position: 12201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14126:1
position: 14126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12201-14126:1:exon

SPSF3K_RS11005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
gene: tet(S)
locus tag: SPSF3K_RS11005
old locus tag: SPSF3K_02223
inference: COORDINATES: similar to AA sequence:RefSeq:WP_063856411.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetracycline resistance ribosomal protection protein Tet(S)
translation: MKIINIGILAHVDAGKTTLTESLLYSSGAIKELGSVDSGTTKTDTMFLERQRGITIQTAITSFQRENVKVNIVDTPGHMDFLADVYRSLSVLDGAILLISAKDGVQSQTRILFHALRKMNIPIIFFINKIDQNGINLPDVYQDIKDKLSDDIIIKQTVNLNLKPYVIDYTEPEQWETVIVGNDYLLEKYTIGKTLNIAELEKEENERIQSCSLYPVYHGSAKNNIGIKQLIEVITSKLFSPTQLNSDKLCGNVFKVEYSDDGQRLVYVRLYSGTLHLRDSVNISEKEKIKVTEMYTSINGELRQIDKAEPGEIIILKNELLKLNNVLGDKKRLPHREILENPLPMLQTTIEPCKSVQREKLLDALFEISDSDPLLQYYVDTVTHEIVLSFLGEVQMEVTCTLIQEKYHIEIETRKPTVIYMERPLKKSEFTIDIEVPPNPFWASIGLSVTPLPLGSGIQYESLVSLGYLNQSFQNAVMEGIRYGCEQGLYGWKLTDCKICFKYGLYYSPVSTPADFRMLAPIVLEQAFRKSGTELLEPYLSFEIYVPQEYLSRAYNDASKYCANILNTKLKGNEVILIGEIPARCIQEYRNSLTFFTNGRSVCLTELKGYQVTNIKSAFQPRRPNNRIDKVRHMFNKINLH
SIO_010081: SPSF3K_RS11005
subclass of: SO_0000673
so part of: SPSF3K_RS11005
location: 12201..14126
location: region:12201-14126:1
so has part: feature:12201-14126:1:exon

WP_000691722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12201-14126:1:exon

SPSF3K_RS11020
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS11020
old locus tag: SPSF3K_02225
so part of: sequence
location: complement(14376..14963)
location: region:14376-14963:-1
so has part: feature:14376-14963:-1:exon
subclass of: SO_0000010

66817193
type: Gene
SIO_000068: ncbigene

position:14376:-1
position: 14376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14963:-1
position: 14963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14376-14963:-1:exon

SPSF3K_RS11020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS11020
old locus tag: SPSF3K_02225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014386284.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF536 domain-containing protein
translation: MSENLKTIKELADEFNVSKQAVRKRLTEEFRANHVETVTSNGVKTLVVTYTGYMLLKQHFTTSNVTGNDKVTDTSNPTTGDLSVVKILEQQLFVKDKQLENKDSQISQMQNLLDQQQRLALQDKKLLEEYKSENDRLKVLKMPSQETEFKHLDNQYKDEVNALKEKLENLQEQIKVKKRIEEQEKQRKWWGLWRK
SIO_010081: SPSF3K_RS11020
subclass of: SO_0000673
so part of: SPSF3K_RS11020
location: complement(14376..14963)
location: region:14376-14963:-1
so has part: feature:14376-14963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14376-14963:-1:exon

SPSF3K_RS11025
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS11025
old locus tag: SPSF3K_02226
so part of: sequence
location: complement(14956..16281)
location: region:14956-16281:-1
so has part: feature:14956-16281:-1:exon
subclass of: SO_0000010

66817194
type: Gene
SIO_000068: ncbigene

position:14956:-1
position: 14956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16281:-1
position: 16281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14956-16281:-1:exon

SPSF3K_RS11025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS11025
old locus tag: SPSF3K_02226
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003140515.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RepB family plasmid replication initiator protein
translation: MSSIPEKQENKKQVLTLNDLEKRKVVEHNSLITSIAKMQKTALKMFELAVSCIDTENLPENNTVYLSKKELFSFFEVSSSSKHSQFKEAIEFMQKQAYFKIKSNKALGIEYESIVPIPYVKWNDYNDEVTIQFSEHIMPYLINLKAEFTQYKISELQKLNSKYSIILYRWLAMNYNQYEHYSVKGGRRAEQVETYRNPSITVKELREITDTIKDYQKMSHFTTWVLEKPLEEINAHTSFNVSYEKVKKGRSIDSIVFHITKKPVARNDFYKLEEQDPIYLQDKAEREGKQQVLFTKAMQSPYTKLLGEKWLINFSDTQDIPTMVGLLEKVYPLYDELKEARGLKGVETHLSYVASKQEGYSKRNVVKYLKTAIEGYLPTVALQDLEQPERANYKKPRSLEEVAKDFLPDYQNETSEAEKEELRRLKAEIDKKLRGEGLDHE
SIO_010081: SPSF3K_RS11025
subclass of: SO_0000673
so part of: SPSF3K_RS11025
location: complement(14956..16281)
location: region:14956-16281:-1
so has part: feature:14956-16281:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14956-16281:-1:exon

SPSF3K_RS11030
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS11030
old locus tag: SPSF3K_02227
so part of: sequence
location: complement(16677..17279)
location: region:16677-17279:-1
so has part: feature:16677-17279:-1:exon
subclass of: SO_0000010

66817195
type: Gene
SIO_000068: ncbigene

position:16677:-1
position: 16677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17279:-1
position: 17279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16677-17279:-1:exon

SPSF3K_RS11030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS11030
old locus tag: SPSF3K_02227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016176895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MVLDNKLGLTNSAELAKQEEILTKTRAKELFESGKLDELEIGTFKGLSDIHQFLFQDIYDFAGKTREVNIAKGNFQFAPRIFLAQTLEYIDKLSQETFDEIIDKYSDMNVAHPFREGNGRATRIWLDLILKNKLGKIVDWNQIDKDEYLNAMIRSTVSTNELKYLIQEALTDDLGKKQFFKGIDASYYYEGYYEIKTEDL
SIO_010081: SPSF3K_RS11030
subclass of: SO_0000673
so part of: SPSF3K_RS11030
location: complement(16677..17279)
location: region:16677-17279:-1
so has part: feature:16677-17279:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16677-17279:-1:exon

SPSF3K_RS11035
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS11035
old locus tag: SPSF3K_02228
so part of: sequence
location: complement(17296..17919)
location: region:17296-17919:-1
so has part: feature:17296-17919:-1:exon
subclass of: SO_0000010

66817196
type: Gene
SIO_000068: ncbigene

position:17296:-1
position: 17296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17919:-1
position: 17919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17296-17919:-1:exon

SPSF3K_RS11035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS11035
old locus tag: SPSF3K_02228
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015543946.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKDEQLVVQVLNAYKNGKIDFSNVPELDRLVRQEVNKDFRDYQEKIEAVANQKIESAIQEQLHRLEAESLKADILKDIQVEKQALLALKKELNEQKEQIKADRKREIVERYGILIANIVCLFCFLVVSILIGRWIYKGIWDGWGLHILYDTVMEIRPKHPYGAVILGLGGFGLIGAGIYGSFRLMYTASTWFDQRPKIFKRIFPKK
SIO_010081: SPSF3K_RS11035
subclass of: SO_0000673
so part of: SPSF3K_RS11035
location: complement(17296..17919)
location: region:17296-17919:-1
so has part: feature:17296-17919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17296-17919:-1:exon

SPSF3K_RS11040
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS11040
old locus tag: SPSF3K_02229
so part of: sequence
location: complement(17916..19148)
location: region:17916-19148:-1
so has part: feature:17916-19148:-1:exon
subclass of: SO_0000010

66817197
type: Gene
SIO_000068: ncbigene

position:17916:-1
position: 17916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19148:-1
position: 19148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17916-19148:-1:exon

SPSF3K_RS11040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS11040
old locus tag: SPSF3K_02229
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002339184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MATIAKISNGASAASALNYALGQDRPMHEKTEQWLQDHQLERPVELTNCRAVAVGGTNGIDPFIAKEQFDVVRQLHNQTKESNQVLRITQSFALDELNPKVQKDWQKANDLGVELAEKLYPNHQSAVYTHLDGKNHVLHNHIIVNKVNLETGNKLREQKGESVQRAREMNDRLASRENWHILEPPKERQTETEKELIAKNEYSYMNDLRERINKSLQDVSVSSYEAFKERLSDNGINISERGQTFSYAFLDANNKQRRARETRLGSDFGRETILHELENRARQNEFSAVEQREPAITPLERDTQQRESEIVSLEQAIEPRKSEALKRESKINRFIDTIKQFAGRVPELTQRVTRKLKQTKDKILDDFERRFSKDMKNYEKEQQKSLEKQANRDVQSEKKPTKDHDRGMSR
SIO_010081: SPSF3K_RS11040
subclass of: SO_0000673
so part of: SPSF3K_RS11040
location: complement(17916..19148)
location: region:17916-19148:-1
so has part: feature:17916-19148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17916-19148:-1:exon

SPSF3K_RS11045
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
gene: mobC
locus tag: SPSF3K_RS11045
old locus tag: SPSF3K_02230
so part of: sequence
location: complement(19127..19492)
location: region:19127-19492:-1
so has part: feature:19127-19492:-1:exon
subclass of: SO_0000010

66817198
type: Gene
SIO_000068: ncbigene

position:19127:-1
position: 19127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19492:-1
position: 19492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19127-19492:-1:exon

SPSF3K_RS11045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
gene: mobC
locus tag: SPSF3K_RS11045
old locus tag: SPSF3K_02230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017369566.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MDHKEVSQNQTKYIQFRLSEEQYNKLKISGETYGLSPNLYAKKLAQKSHLKKPYLEHDQAKALLLELSKQGTNLNQIAKKLNQFDRMDNQDEELIEALRYTYGVLAQAQKGYQELWQQLQK
SIO_010081: SPSF3K_RS11045
subclass of: SO_0000673
so part of: SPSF3K_RS11045
location: complement(19127..19492)
location: region:19127-19492:-1
so has part: feature:19127-19492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19127-19492:-1:exon

SPSF3K_RS11055
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS11055
old locus tag: SPSF3K_02231
so part of: sequence
location: 20131..20811
location: region:20131-20811:1
so has part: feature:20131-20811:1:exon
subclass of: SO_0000010

66817199
type: Gene
SIO_000068: ncbigene

position:20131:1
position: 20131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20811:1
position: 20811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20131-20811:1:exon

SPSF3K_RS11055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS11055
old locus tag: SPSF3K_02231
inference: COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MNHFKGKPFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKRLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRTKFYRSLRTASSTIKGMEAIRGLYKKTRKEGTLFGFSACTEIKVLLGIPA
SIO_010081: SPSF3K_RS11055
subclass of: SO_0000673
so part of: SPSF3K_RS11055
location: 20131..20811
location: region:20131-20811:1
so has part: feature:20131-20811:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20131-20811:1:exon

SPSF3K_RS11060
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS11060
old locus tag: SPSF3K_02232
so part of: sequence
location: 20960..21487
location: region:20960-21487:1
so has part: feature:20960-21487:1:exon
subclass of: SO_0000010

66817200
type: Gene
SIO_000068: ncbigene

position:20960:1
position: 20960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21487:1
position: 21487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20960-21487:1:exon

SPSF3K_RS11060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS11060
old locus tag: SPSF3K_02232
EC number: 2.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005604994.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family protein
translation: MIKTLETSRLQLRKMTISDSAEVFENWTSSEVVAKYLTWAPHSSLEVTEEYLSFEEKNRREGWGIVLKGSNQLIGNIAVIDDKEKIKTKTMGYVLGEKFWNQGYMSEALTRVINFLFETTDVNRIEAEHDVNNPSSGRVMKKSGMTFEGVLRNAGLNNQGIVDVAIYSILRSDLS
SIO_010081: SPSF3K_RS11060
subclass of: SO_0000673
so part of: SPSF3K_RS11060
location: 20960..21487
location: region:20960-21487:1
so has part: feature:20960-21487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20960-21487:1:exon

SPSF3K_RS11065
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS11065
old locus tag: SPSF3K_02233
so part of: sequence
location: complement(21661..22215)
location: region:21661-22215:-1
so has part: feature:21661-22215:-1:exon
subclass of: SO_0000010

66817201
type: Gene
SIO_000068: ncbigene

position:21661:-1
position: 21661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22215:-1
position: 22215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21661-22215:-1:exon

SPSF3K_RS11065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS11065
old locus tag: SPSF3K_02233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003106713.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MNIGYARVSTGLQNLDLQKDSLEKYNCEKIFTDHMSGSKKERPGLKSAVEFSRPGDTIVVWRLDRLGRNMEDLINIVNSLNNKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNLILERSAAGRKAARARGRLGGRPEKFSEQDIKLLKTLVESGTPIKSIADSWGVSRTTIYRYINKF
SIO_010081: SPSF3K_RS11065
subclass of: SO_0000673
so part of: SPSF3K_RS11065
location: complement(21661..22215)
location: region:21661-22215:-1
so has part: feature:21661-22215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21661-22215:-1:exon

SPSF3K_RS11070
type: Gene
subclass of: SO_0000704
RO_0002162: 1348
locus tag: SPSF3K_RS11070
old locus tag: SPSF3K_02234
so part of: sequence
location: complement(22580..23473)
location: region:22580-23473:-1
so has part: feature:22580-23473:-1:exon
subclass of: SO_0000010

66817202
type: Gene
SIO_000068: ncbigene

position:22580:-1
position: 22580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23473:-1
position: 23473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22580-23473:-1:exon

SPSF3K_RS11070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1348
locus tag: SPSF3K_RS11070
old locus tag: SPSF3K_02234
inference: COORDINATES: protein motif:HMM:NF018196.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MucBP domain-containing protein
translation: MFFYTGIKKLTLGSKTKFNDSPELPHIDQSSGVYTGRWERIDPVSPQSFYNGSYDFMSKYDGSFPGTYVWEKTKVKAADVTAKYLDENGNTISDDVVKNGNVGDSYTTEQKAIPGYTFKAVQGNPTGQFTSDAQTVTYIYTKDPVAGGNVTVKYVDGAGGNTISDNVVKSGNIGDDYSTDQKAIPGYTFKEVQGSASGQFTDKEQTITYVYTKNSVTPVKPTEPGTTQTNENNTETPVKNTTNVSLHNNVSTLGSVSTTNEKSLPTTGEKPANWSVVVGGLITLTAATVLYLLKRKY
SIO_010081: SPSF3K_RS11070
subclass of: SO_0000673
so part of: SPSF3K_RS11070
location: complement(22580..23473)
location: region:22580-23473:-1
so has part: feature:22580-23473:-1:exon

WP_103313132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22580-23473:-1:exon