Streptococcus parauberis strain SPOF3K plasmid unnamed, complete sequence.
Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.
Complete genome sequence Streptococcus parauberis SPOF3K
Submitted (15-JAN-2018) Department of Aquatic Life Medicine, Pukyong National University, 45 Yonso-ro, Namgu, Busan KS012, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP025421.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2017\nAssembly Method :: other v. 2.30\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 703.34x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/08/2022 00:12:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,217\nCDSs (total) :: 2,126\nGenes (coding) :: 2,057\nCDSs (with protein) :: 2,057\nGenes (RNA) :: 91\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 69\nncRNAs :: 4\nPseudo Genes (total) :: 69\nCDSs (without protein) :: 69\nPseudo Genes (ambiguous residues) :: 0 of 69\nPseudo Genes (frameshifted) :: 22 of 69\nPseudo Genes (incomplete) :: 40 of 69\nPseudo Genes (internal stop) :: 17 of 69\nPseudo Genes (multiple problems) :: 8 of 69\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011997530.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
tetracycline resistance ribosomal protection protein Tet(S)
COORDINATES: similar to AA sequence:RefSeq:WP_014386284.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003140515.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
RepB family plasmid replication initiator protein
COORDINATES: similar to AA sequence:RefSeq:WP_016176895.1
COORDINATES: similar to AA sequence:RefSeq:WP_015543946.1
COORDINATES: similar to AA sequence:RefSeq:WP_002339184.1
relaxase/mobilization nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017369566.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005604994.1
COORDINATES: similar to AA sequence:RefSeq:WP_003106713.1
COORDINATES: protein motif:HMM:NF015347.2
COORDINATES: similar to AA sequence:RefSeq:WP_002405436.1
COORDINATES: similar to AA sequence:RefSeq:WP_063856411.1
COORDINATES: protein motif:HMM:NF018196.2