Secondary endosymbiont of Heteropsylla cubana, complete sequence.
secondary endosymbiont of Heteropsylla cubana
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; aphid secondary symbionts.
Genome reduction and co-evolution between the primary and secondary bacterial symbionts of psyllids
Submitted (16-MAY-2012) Ecology and Evolutionary Biology, Yale University, 165 Prospect St, New Haven, CT 06520, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP003547.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/11/2022 00:50:58\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 619\nCDSs (total) :: 575\nGenes (coding) :: 552\nCDSs (with protein) :: 552\nGenes (RNA) :: 44\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 38\nncRNAs :: 3\nPseudo Genes (total) :: 23\nCDSs (without protein) :: 23\nPseudo Genes (ambiguous residues) :: 0 of 23\nPseudo Genes (frameshifted) :: 15 of 23\nPseudo Genes (incomplete) :: 10 of 23\nPseudo Genes (internal stop) :: 9 of 23\nPseudo Genes (multiple problems) :: 8 of 23\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_005121475.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412031.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015580525.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0034775 - glutathione transmembrane transport [Evidence IEA]
cysteine/glutathione ABC transporter ATP-binding protein/permease CydC
COORDINATES: similar to AA sequence:RefSeq:WP_012849034.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0042883 - cysteine transport [Evidence IEA]
cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
COORDINATES: similar to AA sequence:RefSeq:WP_011410462.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: similar to AA sequence:RefSeq:WP_010723084.1
GO:0004652 - polynucleotide adenylyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006378 - mRNA polyadenylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013975680.1
COORDINATES: similar to AA sequence:RefSeq:WP_013975535.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF025012.2
COORDINATES: similar to AA sequence:RefSeq:WP_002215550.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF013700.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013975683.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013346876.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411980.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006708562.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410335.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]
outer membrane protein assembly factor BamD
COORDINATES: similar to AA sequence:RefSeq:WP_011410336.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
23S rRNA pseudouridine(1911/1915/1917) synthase RluD
COORDINATES: similar to AA sequence:RefSeq:WP_011411503.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF012497.2
5-enolpyruvylshikimate-3-phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011094136.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005226118.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0075713 - establishment of integrated proviral latency [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0006417 - regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016595055.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016928695.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012822116.1
GO:0006970 - response to osmotic stress [Evidence IEA]
division/outer membrane stress-associated lipid-binding lipoprotein
COORDINATES: similar to AA sequence:RefSeq:WP_005975198.1
GO:0003920 - GMP reductase activity [Evidence IEA]
GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015848451.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012440095.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010887922.1
SodA; manganese binding; only present under aerobic conditions; destroys free radicals; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411102.1
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: similar to AA sequence:RefSeq:NP_417722.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007369858.1
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxyl carrier protein
COORDINATES: similar to AA sequence:RefSeq:WP_013201328.1
GO:0070069 - cytochrome complex [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004393310.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_004235652.1
COORDINATES: similar to AA sequence:RefSeq:WP_004866566.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012769708.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_012883743.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010275272.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019083174.1
COORDINATES: similar to AA sequence:RefSeq:WP_013975521.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]; GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
COORDINATES: similar to AA sequence:RefSeq:WP_002215980.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013096087.1
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
zinc ABC transporter permease subunit ZnuB
COORDINATES: similar to AA sequence:RefSeq:WP_002228434.1
GO:0015633 - ABC-type zinc transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006829 - zinc ion transport [Evidence IEA]
zinc ABC transporter ATP-binding protein ZnuC
COORDINATES: similar to AA sequence:RefSeq:WP_005163056.1
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein ZnuA
COORDINATES: similar to AA sequence:RefSeq:WP_001728717.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004952266.1
GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006302 - double-strand break repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004719722.1
GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009114877.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_011411269.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016941297.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017492509.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004720562.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_011409950.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF037183.2
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_011520372.1
COORDINATES: similar to AA sequence:RefSeq:WP_014268075.1
COORDINATES: similar to AA sequence:RefSeq:WP_014888541.1
COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411823.1
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: protein motif:HMM:TIGR00548.1
GO:0008320 - protein transmembrane transporter activity [Evidence IEA]
lipoprotein insertase outer membrane protein LolB
COORDINATES: similar to AA sequence:RefSeq:WP_000811042.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008110366.1
GO:0005451 - monovalent cation:proton antiporter activity [Evidence IEA]
GO:0006884 - cell volume homeostasis [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012005751.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013576060.1
GO:1904680 - peptide transmembrane transporter activity [Evidence IEA]
GO:0015833 - peptide transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014353924.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002353237.1
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016538905.1
COORDINATES: similar to AA sequence:RefSeq:WP_014913761.1
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051262 - protein tetramerization [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017801548.1
GO:0047952 - glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [Evidence IEA]
GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011411333.1
COORDINATES: similar to AA sequence:RefSeq:WP_015962361.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014915142.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002209319.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004934290.1
sugar/pyridoxal phosphate phosphatase YigL
COORDINATES: similar to AA sequence:RefSeq:WP_015962254.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411076.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_011095741.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007664700.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410215.1
autotransporter assembly complex family protein
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014888560.1
GO:0008677 - 2-dehydropantoate 2-reductase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412004.1
GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015379429.1
GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
lipopolysaccharide heptosyltransferase II
COORDINATES: similar to AA sequence:RefSeq:WP_014888409.1
lipopolysaccharide heptosyltransferase RfaC
COORDINATES: similar to AA sequence:RefSeq:WP_010300327.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000802528.1
COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1
COORDINATES: similar to AA sequence:RefSeq:WP_001307333.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410894.1
COORDINATES: similar to AA sequence:RefSeq:WP_013358671.1
GO:0004801 - transaldolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014605119.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013975463.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411825.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1
COORDINATES: similar to AA sequence:RefSeq:WP_019704633.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_010299765.1
GO:0008803 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH
COORDINATES: similar to AA sequence:RefSeq:WP_004385024.1
COORDINATES: similar to AA sequence:RefSeq:WP_009635929.1
GO:0016896 - exoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]; GO:0042780 - tRNA 3'-end processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015689432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015855389.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019080256.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
COORDINATES: similar to AA sequence:RefSeq:NP_308042.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014887805.1
COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009111556.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1
COORDINATES: similar to AA sequence:RefSeq:WP_004159747.1
GO:0051087 - chaperone binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410290.1
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]; GO:0015920 - lipopolysaccharide transport [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
COORDINATES: protein motif:HMM:NF008038.0
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0042277 - peptide binding [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]; GO:0060274 - maintenance of stationary phase [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0050821 - protein stabilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013811469.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_015580534.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_011192955.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014656880.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
GO:0002943 - tRNA dihydrouridine synthesis [Evidence IEA]
tRNA dihydrouridine(20/20a) synthase DusA
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: similar to AA sequence:RefSeq:WP_002209139.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]
elongation factor P--(R)-beta-lysine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_011411965.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015344283.1
miniconductance mechanosensitive channel MscM
COORDINATES: similar to AA sequence:RefSeq:WP_011410175.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005159072.1
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005224993.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004176849.1
GO:0009279 - cell outer membrane [Evidence IEA]
peptidoglycan-associated lipoprotein Pal
COORDINATES: similar to AA sequence:RefSeq:WP_010847138.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005159411.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_311462.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002913437.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015704797.1
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410764.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013576786.1
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013357330.1
COORDINATES: similar to AA sequence:RefSeq:WP_005175094.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012004543.1
COORDINATES: similar to AA sequence:RefSeq:WP_000376337.1
nucleoside transporter C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016942705.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000541039.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_002215609.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_014605111.1
COORDINATES: similar to AA sequence:RefSeq:WP_002209987.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013357366.1
TusE/DsrC/DsvC family sulfur relay protein
COORDINATES: similar to AA sequence:RefSeq:WP_019453388.1
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007892032.1
acetyl-CoA carboxylase, carboxyltransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014888299.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004326 - tetrahydrofolylpolyglutamate synthase activity [Evidence IEA]
bifunctional tetrahydrofolate synthase/dihydrofolate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_006818745.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011070063.1
COORDINATES: similar to AA sequence:RefSeq:WP_005693550.1
GO:0016746 - acyltransferase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016190028.1
GO:0009403 - toxin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410124.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0005975 - carbohydrate metabolic process [Evidence IEA]
bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
COORDINATES: similar to AA sequence:RefSeq:WP_011410126.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_004705333.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017891863.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015671239.1
GO:0004017 - adenylate kinase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016929743.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004092918.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]
23S rRNA pseudouridine(955/2504/2580) synthase RluC
COORDINATES: similar to AA sequence:RefSeq:WP_012764501.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410255.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003747 - translation release factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015344274.1
GO:0072581 - protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410763.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_020884327.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015700385.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411788.1
GO:0000030 - mannosyltransferase activity [Evidence IEA]; GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0006493 - protein O-linked glycosylation [Evidence IEA]
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015848510.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
COORDINATES: similar to AA sequence:RefSeq:WP_017347609.1
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA
COORDINATES: similar to AA sequence:RefSeq:WP_011411791.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
COORDINATES: similar to AA sequence:RefSeq:WP_009088104.1
COORDINATES: similar to AA sequence:RefSeq:WP_020455749.1
GO:0016740 - transferase activity [Evidence IEA]
lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: similar to AA sequence:RefSeq:WP_011412013.1
COORDINATES: protein motif:HMM:NF015560.2
COORDINATES: similar to AA sequence:RefSeq:WP_011410067.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
3-deoxy-manno-octulosonate-8-phosphatase KdsC
COORDINATES: similar to AA sequence:RefSeq:WP_011410066.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter periplasmic protein LptC
COORDINATES: similar to AA sequence:RefSeq:WP_011410065.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0001530 - lipopolysaccharide binding [Evidence IEA]
lipopolysaccharide transport periplasmic protein LptA
COORDINATES: similar to AA sequence:RefSeq:WP_004091254.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011411607.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411608.1
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411618.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013975657.1
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF019292.2
nucleoside recognition domain-containing protein
COORDINATES: protein motif:HMM:NF014474.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011147063.1
COORDINATES: similar to AA sequence:RefSeq:WP_012144916.1
COORDINATES: similar to AA sequence:RefSeq:WP_009112395.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0006534 - cysteine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411254.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013975753.1
COORDINATES: similar to AA sequence:RefSeq:WP_004919158.1
COORDINATES: similar to AA sequence:RefSeq:WP_015840661.1
COORDINATES: similar to AA sequence:RefSeq:WP_010284631.1
LPS export ABC transporter permease LptF
COORDINATES: similar to AA sequence:RefSeq:WP_014887752.1
LPS export ABC transporter permease LptG
COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1
COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1
phosphoenolpyruvate-protein phosphotransferase PtsI
COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1
COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015962291.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_000174879.1
GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013359175.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_013975506.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013027399.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410203.1
COORDINATES: similar to AA sequence:RefSeq:WP_002209154.1
GO:0045861 - negative regulation of proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002209151.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410199.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410196.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1
GO:0008653 - lipopolysaccharide metabolic process [Evidence IEA]
lipopolysaccharide assembly protein LapB
COORDINATES: similar to AA sequence:RefSeq:WP_002431889.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002209458.1
COORDINATES: similar to AA sequence:RefSeq:WP_004155936.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010308356.1
GO:0009019 - tRNA (guanine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:NP_461603.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410284.1
GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011409973.1
COORDINATES: similar to AA sequence:RefSeq:WP_011409945.1
COORDINATES: similar to AA sequence:RefSeq:YP_005225140.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011191743.1
COORDINATES: similar to AA sequence:RefSeq:NP_308145.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004738 - pyruvate dehydrogenase activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
COORDINATES: similar to AA sequence:RefSeq:WP_001176286.1
GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF007975.0
COORDINATES: similar to AA sequence:RefSeq:WP_011411737.1
COORDINATES: similar to AA sequence:RefSeq:WP_002208956.1
GO:0004324 - ferredoxin-NADP+ reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012821940.1
GO:0097163 - sulfur carrier activity [Evidence IEA]
GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012441000.1
COORDINATES: similar to AA sequence:RefSeq:WP_014887776.1
COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007374015.1
COORDINATES: similar to AA sequence:RefSeq:WP_014888530.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013814153.1
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO:0019538 - protein metabolic process [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1
COORDINATES: protein motif:HMM:NF012339.2
2Fe-2S iron-sulfur cluster binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005973111.1
COORDINATES: similar to AA sequence:RefSeq:WP_002434423.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014888600.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_001612599.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012005643.1
rare lipoprotein B; involved in the assembly of LPS in the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004965946.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410663.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_017491372.1
GO:0008658 - penicillin binding [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004716309.1
rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002210821.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit A
COORDINATES: similar to AA sequence:RefSeq:WP_012990476.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011520533.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1
COORDINATES: similar to AA sequence:RefSeq:NP_312192.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1
COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1
COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1
COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1
COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1
COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1
COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1
COORDINATES: similar to AA sequence:RefSeq:WP_005501250.1
COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1
COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1
COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1
COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1
COORDINATES: similar to AA sequence:RefSeq:WP_015874220.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
COORDINATES: similar to AA sequence:RefSeq:WP_002213425.1
COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1
COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1
COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1
COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1
COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010671668.1
GO:0019180 - dTDP-4-amino-4,6-dideoxygalactose transaminase activity [Evidence IEA]
GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
dTDP-4-amino-4,6-dideoxygalactose transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_011410090.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004246509.1
COORDINATES: similar to AA sequence:RefSeq:WP_005295677.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013511119.1
membrane protein insertion efficiency factor YidD
COORDINATES: similar to AA sequence:RefSeq:WP_003849663.1
GO:0032977 - membrane insertase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015848543.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_011094855.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006320572.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014888567.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_019456066.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410461.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012146995.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_002445274.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_004387079.1
COORDINATES: similar to AA sequence:RefSeq:WP_012439923.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_312934.1
COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1
COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_015873271.1
COORDINATES: similar to AA sequence:RefSeq:WP_014701313.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002208635.1
COORDINATES: similar to AA sequence:RefSeq:WP_014888406.1
COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_012146396.1
COORDINATES: similar to AA sequence:RefSeq:WP_002222677.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410569.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_011410670.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006686216.1
COORDINATES: similar to AA sequence:RefSeq:WP_012147463.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410437.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_012441862.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
3-phosphoserine/phosphohydroxythreonine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_002439962.1
GO:0050661 - NADP binding [Evidence IEA]; GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
NADP-dependent phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_015839476.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004931677.1
GO:0005542 - folic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006318688.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015580450.1
COORDINATES: similar to AA sequence:RefSeq:NP_312095.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1
COORDINATES: similar to AA sequence:RefSeq:WP_009114846.1
GO:0090529 - cell septum assembly [Evidence IEA]; GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000103863.1
COORDINATES: similar to AA sequence:RefSeq:WP_000349814.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: similar to AA sequence:RefSeq:WP_012768595.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_009639012.1
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: protein motif:HMM:NF016839.2
COORDINATES: similar to AA sequence:RefSeq:WP_006708235.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012144882.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1
COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1
COORDINATES: similar to AA sequence:RefSeq:WP_011898682.1
COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_462390.1
COORDINATES: similar to AA sequence:RefSeq:NP_311977.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006328193.1
GO:0003896 - DNA primase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_311975.1
COORDINATES: similar to AA sequence:RefSeq:WP_000798871.1
GO:0051540 - metal cluster binding [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: similar to AA sequence:RefSeq:WP_011411104.1
GO:0008199 - ferric iron binding [Evidence IEA]
GO:0006879 - cellular iron ion homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410404.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_005182120.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014882759.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_000827403.1
GO:0008995 - ribonuclease E activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004155916.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011094879.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005167086.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015841720.1
COORDINATES: similar to AA sequence:RefSeq:WP_011147811.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_308125.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: protein motif:HMM:NF015739.2
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010681517.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004932773.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004244117.1
COORDINATES: similar to AA sequence:RefSeq:WP_009092140.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_016946234.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0071555 - cell wall organization [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_016946235.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_004094559.1
GO:0008658 - penicillin binding [Evidence IEA]; GO:0008955 - peptidoglycan glycosyltransferase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009634701.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_012123587.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:NP_459314.1
GO:0000310 - xanthine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411622.1
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014354278.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411625.1
outer membrane protein assembly factor BamE
COORDINATES: protein motif:HMM:NF015331.2
COORDINATES: similar to AA sequence:RefSeq:WP_011412100.1
COORDINATES: similar to AA sequence:RefSeq:WP_000100440.1
GO:0043867 - 7-cyano-7-deazaguanine tRNA-ribosyltransferase activity [Evidence IEA]; GO:0033739 - preQ1 synthase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
COORDINATES: similar to AA sequence:RefSeq:WP_015670957.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015670966.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001143356.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410345.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_114508865.1
SmdA family multidrug ABC transporter permease/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006685699.1
SmdB family multidrug efflux ABC transporter permease/ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005163342.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004708859.1
COORDINATES: similar to AA sequence:RefSeq:WP_005184489.1
COORDINATES: similar to AA sequence:RefSeq:WP_000605537.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0042908 - xenobiotic transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015839562.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000865552.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410344.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411447.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411705.1
COORDINATES: protein motif:HMM:NF005942.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411605.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411423.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003838949.1
COORDINATES: similar to AA sequence:RefSeq:WP_017893059.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015872161.1
GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1
COORDINATES: similar to AA sequence:RefSeq:WP_006317032.1
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004157855.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411164.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020884604.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011095516.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412095.1
COORDINATES: similar to AA sequence:RefSeq:WP_003852912.1
COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412092.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_312930.1
COORDINATES: similar to AA sequence:RefSeq:WP_012990020.1
COORDINATES: similar to AA sequence:RefSeq:WP_013576463.1
GO:0004614 - phosphoglucomutase activity [Evidence IEA]
phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
COORDINATES: similar to AA sequence:RefSeq:WP_014888311.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002230790.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0006188 - IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000004751.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]; GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1
COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_011412058.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012990470.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013975819.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412054.1
COORDINATES: similar to AA sequence:RefSeq:WP_005165371.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011411581.1
outer membrane protein assembly factor BamB
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: similar to AA sequence:RefSeq:WP_011094740.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008812502.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014888513.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010302844.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_013576500.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410656.1
GO:0033819 - lipoyl(octanoyl) transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005283062.1
GO:0008968 - D-sedoheptulose 7-phosphate isomerase activity [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_310560.1
transcription antiterminator/RNA stability regulator CspE
COORDINATES: similar to AA sequence:RefSeq:WP_002211058.1
COORDINATES: similar to AA sequence:RefSeq:WP_004925840.1
COORDINATES: similar to AA sequence:RefSeq:NP_308458.1
GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410139.1
1-acylglycerol-3-phosphate O-acyltransferase
COORDINATES: protein motif:HMM:NF015686.2
COORDINATES: similar to AA sequence:RefSeq:WP_017373961.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0050992 - dimethylallyl diphosphate biosynthetic process [Evidence IEA]; GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_004248970.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015841784.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005166981.1
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_012764371.1
COORDINATES: similar to AA sequence:RefSeq:WP_007702297.1
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017459784.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015580533.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004810 - CCA tRNA nucleotidyltransferase [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001680 - tRNA 3'-terminal CCA addition [Evidence IEA]
multifunctional CCA addition/repair protein
COORDINATES: similar to AA sequence:RefSeq:WP_013357465.1
COORDINATES: similar to AA sequence:RefSeq:WP_012442536.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411752.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004363 - glutathione synthase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02205.1
GO:0000917 - division septum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1
GO:0008934 - inositol monophosphate 1-phosphatase activity [Evidence IEA]
GO:0046855 - inositol phosphate dephosphorylation [Evidence IEA]; GO:0046854 - phosphatidylinositol phosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006708081.1
COORDINATES: similar to AA sequence:RefSeq:NP_459252.1
GO:0016791 - phosphatase activity [Evidence IEA]
D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_004242214.1
COORDINATES: similar to AA sequence:RefSeq:WP_005276101.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411672.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411671.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010284823.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011411669.1
GO:0008834 - di-trans,poly-cis-decaprenylcistransferase activity [Evidence IEA]; GO:0002094 - polyprenyltransferase activity [Evidence IEA]
GO:0043164 - Gram-negative-bacterium-type cell wall biogenesis [Evidence IEA]
(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_000922444.1
COORDINATES: similar to AA sequence:RefSeq:WP_005276116.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004952214.1
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_012883669.1
COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012987198.1
COORDINATES: similar to AA sequence:RefSeq:WP_011282829.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003852634.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009114133.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019455765.1
acetyl-CoA carboxylase carboxyl transferase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1
GO:0019899 - enzyme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410503.1
COORDINATES: similar to AA sequence:RefSeq:WP_017489876.1
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005191581.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005173313.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_002218559.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1
PTS mannose/fructose/sorbose transporter subunit IIC
COORDINATES: similar to AA sequence:RefSeq:WP_004961819.1
COORDINATES: similar to AA sequence:RefSeq:WP_012770768.1
COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012004738.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002220013.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005121085.1
GO:0042953 - lipoprotein transport [Evidence IEA]
lipoprotein-releasing ABC transporter permease subunit LolE
COORDINATES: similar to AA sequence:RefSeq:WP_011410937.1
lipoprotein-releasing ABC transporter ATP-binding protein LolD
COORDINATES: similar to AA sequence:RefSeq:WP_019083396.1
lipoprotein-releasing ABC transporter permease subunit LolC
COORDINATES: similar to AA sequence:RefSeq:WP_005970464.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013812282.1
outer membrane lipoprotein chaperone LolA
COORDINATES: similar to AA sequence:RefSeq:WP_014888125.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016231545.1
COORDINATES: similar to AA sequence:RefSeq:WP_002211872.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412196.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006661691.1
23S rRNA pseudouridine(2605) synthase RluB
COORDINATES: similar to AA sequence:RefSeq:WP_002210955.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410094.1
COORDINATES: similar to AA sequence:RefSeq:WP_020454710.1
COORDINATES: similar to AA sequence:RefSeq:WP_016941324.1
COORDINATES: similar to AA sequence:RefSeq:WP_011411764.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_000168322.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410083.1
ClpXP protease specificity-enhancing factor
COORDINATES: similar to AA sequence:RefSeq:WP_011411422.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: similar to AA sequence:RefSeq:WP_013509706.1
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0008852 - exodeoxyribonuclease I activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
class Ia ribonucleoside-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:YP_005228008.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
class 1a ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_019080555.1
COORDINATES: similar to AA sequence:RefSeq:WP_014888520.1
GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012135077.1
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011092574.1
GO:0008933 - lytic transglycosylase activity [Evidence IEA]
GO:0000270 - peptidoglycan metabolic process [Evidence IEA]
membrane-bound lytic murein transglycosylase MltC
COORDINATES: similar to AA sequence:RefSeq:WP_011410533.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410857.1
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017693697.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0034040 - ATPase-coupled lipid transmembrane transporter activity [Evidence IEA]
lipid A ABC transporter ATP-binding protein/permease MsbA
COORDINATES: similar to AA sequence:RefSeq:WP_011410514.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010296670.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1
GO:0010974 - negative regulation of division septum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008806833.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_014888105.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008107883.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410538.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018509.2
outer membrane protein assembly factor BamC
COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_002215386.1
COORDINATES: similar to AA sequence:RefSeq:WP_013508656.1
COORDINATES: similar to AA sequence:RefSeq:WP_002210932.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410918.1
COORDINATES: similar to AA sequence:RefSeq:WP_014915842.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010297224.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016940845.1
HPF/RaiA family ribosome-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1
GO:0008693 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [Evidence IEA]
bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_012768790.1
GO:0008782 - adenosylhomocysteine nucleosidase activity [Evidence IEA]; GO:0008930 - methylthioadenosine nucleosidase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
COORDINATES: similar to AA sequence:RefSeq:WP_013317812.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012668493.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011410726.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005156285.1
GO:0016436 - rRNA (uridine) methyltransferase activity [Evidence IEA]
GO:0001510 - RNA methylation [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]
23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
COORDINATES: similar to AA sequence:RefSeq:WP_004952840.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410235.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013573817.1
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002441992.1
COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1
GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1
COORDINATES: similar to AA sequence:RefSeq:WP_014888186.1
COORDINATES: similar to AA sequence:RefSeq:WP_011410241.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014888188.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1
COORDINATES: similar to AA sequence:RefSeq:WP_002228303.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_001295553.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
GO:0000027 - ribosomal large subunit assembly [Evidence IEA]
DEAD/DEAH family ATP-dependent RNA helicase
COORDINATES: similar to AA sequence:RefSeq:WP_013975554.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410926.1
COORDINATES: similar to AA sequence:RefSeq:WP_006322505.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011411334.1
GO:0008859 - exoribonuclease II activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_015699237.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012769784.1
COORDINATES: similar to AA sequence:RefSeq:WP_015834659.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005975993.1
GO:0051075 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_015848444.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011410534.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_011410536.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1
GO:0044571 - [2Fe-2S] cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016191582.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]
Fe-S cluster assembly transcriptional regulator IscR
COORDINATES: similar to AA sequence:RefSeq:WP_004706254.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
iron-sulfur cluster insertion protein ErpA
COORDINATES: similar to AA sequence:RefSeq:YP_005226380.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF003441.0
GO:0004366 - glycerol-3-phosphate O-acyltransferase activity [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsB
COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0051604 - protein maturation [Evidence IEA]