Carcharodon carcharias isolate sCarCar2 chromosome 40, sCarCar2.pri, whole genome shotgun sequence.
type: Entry
definition: Carcharodon carcharias isolate sCarCar2 chromosome 40, sCarCar2.pri, whole genome shotgun sequence.
sequence version: NC_054506.1
sequence date: 2021-05-03
sequence: sequence
division: CON
label: NC_054506.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA725502
dblink: SAMN12629504
keyword: WGS
keyword: RefSeq
source: Carcharodon carcharias (great white shark)
organism: Carcharodon carcharias
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Lamniformes; Alopiidae; Carcharodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030004.1.\nAssembly name: sCarCar2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/30. The original whole-genome shotgun project has the\naccession JAGDEE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 05-FEB-2021\nAssembly Method :: FALCON v. DX 2.0.1; FALCON-Unzip v. DX\n 1.2.1; purge_dups v. DX 19-08-10;\n scaff10X v. DX 2.0.3; bionano Solve v. DX\n 3.4.0; Salsa2 HiC v. DX 2.2.0; Arrow\n polishing and gap filling v. DX 7.0.1.1;\n Longranger Align DX v. 2.2.2.1; freebayes\n DX v. 19-07-11; gEVAL manual curation v.\n 2021-02-05; VGP assembly pipeline v. 1.6\nAssembly Name :: sCarCar2.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 66.84x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Carcharodon carcharias Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 3712701
topology: linear
so has quality: SO_0000987
location: 1..3712701
location: region:1-3712701:1
RO_0002162: 13397

NC_054506
type: RefSeq
SIO_000068: refseq

PRJNA725502
type: BioProject
SIO_000068: bioproject

SAMN12629504
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3712701:1
position: 3712701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-3712701:1:source
so part of: sequence
organism: Carcharodon carcharias
mol type: genomic DNA
isolate: sCarCar2
chromosome: 40
sex: male
tissue type: blood
dev stage: juvenile
country: USA
lat lon: 33.782158 N 118.12249 W
collection date: 2019-01-30
collected by: Chris Lowe, Kady Lyons

13397
type: Taxonomy
SIO_000068: taxonomy

LOC121273142
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281468..301057
location: region:281468-301057:1
so has part: feature:281468-301057:1:exon
subclass of: SO_0000010

121273142
type: Gene
SIO_000068: ncbigene

position:281468:1
position: 281468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301057:1
position: 301057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281468-301057:1:exon

LOC121273142
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273142
product: amiloride-sensitive sodium channel subunit alpha-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180102.1
SIO_010081: LOC121273142
subclass of: SO_0000673
so part of: LOC121273142
location: join(281468..281492,283425..283753,284350..284656,285765..285955,290031..290134,290410..290573,292150..292248,293376..293493,297307..297385,298064..298121,299273..299325,299987..300062,300641..301057)
location: region:281468-301057:1
so has part: feature:281468-281492:1:exon
so has part: feature:283425-283753:1:exon
so has part: feature:284350-284656:1:exon
so has part: feature:285765-285955:1:exon
so has part: feature:290031-290134:1:exon
so has part: feature:290410-290573:1:exon
so has part: feature:292150-292248:1:exon
so has part: feature:293376-293493:1:exon
so has part: feature:297307-297385:1:exon
so has part: feature:298064-298121:1:exon
so has part: feature:299273-299325:1:exon
so has part: feature:299987-300062:1:exon
so has part: feature:300641-301057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281468-281492:1:exon

position:281492:1
position: 281492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283425-283753:1:exon

position:283425:1
position: 283425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283753:1
position: 283753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284350-284656:1:exon

position:284350:1
position: 284350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284656:1
position: 284656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:285765-285955:1:exon

position:285765:1
position: 285765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285955:1
position: 285955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290031-290134:1:exon

position:290031:1
position: 290031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290134:1
position: 290134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:290410-290573:1:exon

position:290410:1
position: 290410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290573:1
position: 290573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:292150-292248:1:exon

position:292150:1
position: 292150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292248:1
position: 292248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:293376-293493:1:exon

position:293376:1
position: 293376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293493:1
position: 293493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:297307-297385:1:exon

position:297307:1
position: 297307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297385:1
position: 297385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:298064-298121:1:exon

position:298064:1
position: 298064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298121:1
position: 298121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:299273-299325:1:exon

position:299273:1
position: 299273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299325:1
position: 299325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:299987-300062:1:exon

position:299987:1
position: 299987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300062:1
position: 300062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:300641-301057:1:exon

position:300641:1
position: 300641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273142
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amiloride-sensitive sodium channel subunit alpha-like
translation: MTDKQEAAEGEGAEGWFEFPRTYRELLLFFCSHTTVHGAVRLICSERNRMKTSFWAAVLALSVGVMYWQFGIIFQQYWQFPVSIQLSVDTRTLKFPAVTICTLNPYRYKAVRNDLHELDQLTEEALYALYGYKRPSPGPGPHRAPSPRRRDAFPRRLGLRLIDPGRRRGLALEIGARRSPATNGSSGHGAWLHNPPLSRNSSWKIGFELCNETGGDCFYNWHSSGVDAVREWYAFHYVNVMARVARVPGPLGEAHFADFIFDCTFNGWSCGKSNYTTFNHPIYGNCYTFNGINSSYQWQTSKAGKDNGLCLLVKTQQNDYIPLLSTDAGARVMVHEPNKAPFMEDGGFDIRPGVATSISMRKEEVIRLGGDYSDCTQDGSEIGVPNLYMSDYTQQACVRSCFQITMVSRCGCAYYFYPRPPGAEYCNYNKHIAWGHCYYRLSKEFSADVLGCFRTCQKPCQQTEYQMTAGYANWPSKNSESWIYPVLHNEKQFSSSNRKEIAKLNLFFRELNYKTMSENPALPVVLVLSNLGSQWSLWFGSSVLSVVEILELVVDLGVLSTVLVLAALRRRLLGGSGPPPPPPPPPPPPPLPEPPHHPCCRRPIYPHARRDPGAHLGAFDSLADSALPPTYDSLDQRGRGGDQEGVSPGPEGPGGGTVTYL
SIO_010081: LOC121273142
subclass of: SO_0000673
so part of: LOC121273142
location: join(283434..283753,284350..284656,285765..285955,290031..290134,290410..290573,292150..292248,293376..293493,297307..297385,298064..298121,299273..299325,299987..300062,300641..301057)
location: region:283434-301057:1
so has part: feature:283434-283753:1:exon
so has part: feature:284350-284656:1:exon
so has part: feature:285765-285955:1:exon
so has part: feature:290031-290134:1:exon
so has part: feature:290410-290573:1:exon
so has part: feature:292150-292248:1:exon
so has part: feature:293376-293493:1:exon
so has part: feature:297307-297385:1:exon
so has part: feature:298064-298121:1:exon
so has part: feature:299273-299325:1:exon
so has part: feature:299987-300062:1:exon
so has part: feature:300641-301057:1:exon

XP_041036036.1
type: Protein
SIO_000068: ncbiprotein

position:283434:1
position: 283434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283434-283753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284350-284656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285765-285955:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290031-290134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290410-290573:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:292150-292248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293376-293493:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:297307-297385:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:298064-298121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:299273-299325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:299987-300062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:300641-301057:1:exon

LOC121273153
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 304735..315598
location: region:304735-315598:1
so has part: feature:304735-315598:1:exon
subclass of: SO_0000010

121273153
type: Gene
SIO_000068: ncbigene

position:304735:1
position: 304735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315598:1
position: 315598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304735-315598:1:exon

LOC121273153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273153
product: tapasin-related protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180114.1
SIO_010081: LOC121273153
subclass of: SO_0000673
so part of: LOC121273153
location: join(304735..304890,305212..305442,307059..307343,307606..307941,313408..313737,314833..314916,315059..315598)
location: region:304735-315598:1
so has part: feature:304735-304890:1:exon
so has part: feature:305212-305442:1:exon
so has part: feature:307059-307343:1:exon
so has part: feature:307606-307941:1:exon
so has part: feature:313408-313737:1:exon
so has part: feature:314833-314916:1:exon
so has part: feature:315059-315598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304735-304890:1:exon

position:304890:1
position: 304890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305212-305442:1:exon

position:305212:1
position: 305212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305442:1
position: 305442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307059-307343:1:exon

position:307059:1
position: 307059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307343:1
position: 307343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:307606-307941:1:exon

position:307606:1
position: 307606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307941:1
position: 307941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313408-313737:1:exon

position:313408:1
position: 313408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313737:1
position: 313737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:314833-314916:1:exon

position:314833:1
position: 314833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314916:1
position: 314916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:315059-315598:1:exon

position:315059:1
position: 315059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273153
product: tapasin-related protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180116.1
SIO_010081: LOC121273153
subclass of: SO_0000673
so part of: LOC121273153
location: join(304735..304890,305212..305442,307059..307343,313408..313737,314833..314916,315059..315598)
location: region:304735-315598:1
so has part: feature:304735-304890:1:exon
so has part: feature:305212-305442:1:exon
so has part: feature:307059-307343:1:exon
so has part: feature:313408-313737:1:exon
so has part: feature:314833-314916:1:exon
so has part: feature:315059-315598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304735-304890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305212-305442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307059-307343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313408-313737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314833-314916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315059-315598:1:exon

LOC121273153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tapasin-related protein-like isoform X1
translation: MPHDVHWLLLYLVLLVGVESGLRQAADLVLDCWYIEDRGGLGVMGVAFNHEKALLILRNISISGDEETSAWTDYEVQDKDREHIIFEALVSDVPIPDGDALLHADCEGQEVTCDISMLEGPSERHEGEDKPRTTFSGGLRIAGIGLGVSLVFRTIPVTEEEGGERRINERLNVELSTSGTIPLSVEFILYTHTASLRTTLGRNLLLDCGFVGADPDSVSVEWRVQHKGAGRIIYSLAGGEGVSEREGASIENERVHSEGNVSLHIQDFTMKDEGTYICTIKSNRGQAQQAIVVEVMEPPCAVLKAETLHFEAGVRQDLACEISRYYPLDVSVKWSEESEADDQGPLALPGVSYSSHRRNKDGTYNLSSQVSVTPSLEGTSSVYTCEVTHVALEEPLRVSLRLDAPTGYPIAMPGFIVSSVLFLLTLLYFCRPSQGPSDRTGQRKLS
SIO_010081: LOC121273153
subclass of: SO_0000673
so part of: LOC121273153
location: join(304854..304890,305212..305442,307059..307343,307606..307941,313408..313737,314833..314916,315059..315096)
location: region:304854-315096:1
so has part: feature:304854-304890:1:exon
so has part: feature:305212-305442:1:exon
so has part: feature:307059-307343:1:exon
so has part: feature:307606-307941:1:exon
so has part: feature:313408-313737:1:exon
so has part: feature:314833-314916:1:exon
so has part: feature:315059-315096:1:exon

XP_041036048.1
type: Protein
SIO_000068: ncbiprotein

position:304854:1
position: 304854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315096:1
position: 315096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304854-304890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305212-305442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307059-307343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307606-307941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313408-313737:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:314833-314916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:315059-315096:1:exon

LOC121273153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tapasin-related protein-like isoform X2
translation: MPHDVHWLLLYLVLLVGVESGLRQAADLVLDCWYIEDRGGLGVMGVAFNHEKALLILRNISISGDEETSAWTDYEVQDKDREHIIFEALVSDVPIPDGDALLHADCEGQEVTCDISMLEGPSERHEGEDKPRTTFSGGLRIAGIGLGVSLVFRTIPVTEEEGGERRINERLNVELSTSGTIPLSEPPCAVLKAETLHFEAGVRQDLACEISRYYPLDVSVKWSEESEADDQGPLALPGVSYSSHRRNKDGTYNLSSQVSVTPSLEGTSSVYTCEVTHVALEEPLRVSLRLDAPTGYPIAMPGFIVSSVLFLLTLLYFCRPSQGPSDRTGQRKLS
SIO_010081: LOC121273153
subclass of: SO_0000673
so part of: LOC121273153
location: join(304854..304890,305212..305442,307059..307343,313408..313737,314833..314916,315059..315096)
location: region:304854-315096:1
so has part: feature:304854-304890:1:exon
so has part: feature:305212-305442:1:exon
so has part: feature:307059-307343:1:exon
so has part: feature:313408-313737:1:exon
so has part: feature:314833-314916:1:exon
so has part: feature:315059-315096:1:exon

XP_041036050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304854-304890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305212-305442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307059-307343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313408-313737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314833-314916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315059-315096:1:exon

LOC121273158
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273158
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 426698..510007
location: region:426698-510007:1
so has part: feature:426698-510007:1:exon
subclass of: SO_0000010

121273158
type: Gene
SIO_000068: ncbigene

position:426698:1
position: 426698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510007:1
position: 510007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426698-510007:1:exon

LOC121273158
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273158
product: tumor necrosis factor receptor superfamily member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041180127.1
SIO_010081: LOC121273158
subclass of: SO_0000673
so part of: LOC121273158
location: join(426698..426770,427601..427729,438879..439043,440234..440327,443374..443483,444656..444781,457639..457667,508261..508543,509512..510007)
location: region:426698-510007:1
so has part: feature:426698-426770:1:exon
so has part: feature:427601-427729:1:exon
so has part: feature:438879-439043:1:exon
so has part: feature:440234-440327:1:exon
so has part: feature:443374-443483:1:exon
so has part: feature:444656-444781:1:exon
so has part: feature:457639-457667:1:exon
so has part: feature:508261-508543:1:exon
so has part: feature:509512-510007:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426698-426770:1:exon

position:426770:1
position: 426770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427601-427729:1:exon

position:427601:1
position: 427601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427729:1
position: 427729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:438879-439043:1:exon

position:438879:1
position: 438879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439043:1
position: 439043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:440234-440327:1:exon

position:440234:1
position: 440234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440327:1
position: 440327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443374-443483:1:exon

position:443374:1
position: 443374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443483:1
position: 443483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:444656-444781:1:exon

position:444656:1
position: 444656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444781:1
position: 444781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:457639-457667:1:exon

position:457639:1
position: 457639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457667:1
position: 457667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:508261-508543:1:exon

position:508261:1
position: 508261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508543:1
position: 508543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:509512-510007:1:exon

position:509512:1
position: 509512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273158
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273158
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 3-like
translation: MGMDESDTTCSNCVPHSPCPPGQGVKMPGNYSANTVCAVCTEGTFSNVTSDTQRCQPHTDCSARGGFTAKHGNSTTDTECQTRLNGPLGRSGESDTGPTSIPLLILCALLFLSVVTISLCLLRGLGKQGPLHLSCFKKVFKSCISDPEAQTTEGSCPDSLRAEQLLSTSESPERQAVPANFPSQPLESEILQERVCDQDTASSVSSVQPGHSPSRNREEGPGPSSQTAGIPEKDADKSTGIIGPVFIYNPSRVYVGVISNRWASQRSLPASEDTGSSEGSLRYPQEEQGTAERESGTLPEQECGKESHLPESVAKEA
SIO_010081: LOC121273158
subclass of: SO_0000673
so part of: LOC121273158
location: join(438959..439043,440234..440327,443374..443483,444656..444781,457639..457667,508261..508543,509512..509738)
location: region:438959-509738:1
so has part: feature:438959-439043:1:exon
so has part: feature:440234-440327:1:exon
so has part: feature:443374-443483:1:exon
so has part: feature:444656-444781:1:exon
so has part: feature:457639-457667:1:exon
so has part: feature:508261-508543:1:exon
so has part: feature:509512-509738:1:exon

XP_041036061.1
type: Protein
SIO_000068: ncbiprotein

position:438959:1
position: 438959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509738:1
position: 509738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438959-439043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440234-440327:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443374-443483:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444656-444781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457639-457667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508261-508543:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:509512-509738:1:exon

LOC121273159
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(511741..629181)
location: region:511741-629181:-1
so has part: feature:511741-629181:-1:exon
subclass of: SO_0000010

121273159
type: Gene
SIO_000068: ncbigene

position:511741:-1
position: 511741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629181:-1
position: 629181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511741-629181:-1:exon

LOC121273159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273159
product: forkhead box protein J2-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041180132.1
SIO_010081: LOC121273159
subclass of: SO_0000673
so part of: LOC121273159
location: complement(join(511741..511956,514930..515049,516579..516704,518212..518313,519403..519585,552510..552657,559750..559824,628780..629181))
location: region:511741-629181:-1
so has part: feature:628780-629181:-1:exon
so has part: feature:559750-559824:-1:exon
so has part: feature:552510-552657:-1:exon
so has part: feature:519403-519585:-1:exon
so has part: feature:518212-518313:-1:exon
so has part: feature:516579-516704:-1:exon
so has part: feature:514930-515049:-1:exon
so has part: feature:511741-511956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628780-629181:-1:exon

position:628780:-1
position: 628780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559750-559824:-1:exon

position:559750:-1
position: 559750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559824:-1
position: 559824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:552510-552657:-1:exon

position:552510:-1
position: 552510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552657:-1
position: 552657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:519403-519585:-1:exon

position:519403:-1
position: 519403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519585:-1
position: 519585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:518212-518313:-1:exon

position:518212:-1
position: 518212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518313:-1
position: 518313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:516579-516704:-1:exon

position:516579:-1
position: 516579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516704:-1
position: 516704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:514930-515049:-1:exon

position:514930:-1
position: 514930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515049:-1
position: 515049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:511741-511956:-1:exon

position:511956:-1
position: 511956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273159
product: forkhead box protein J2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041180129.1
SIO_010081: LOC121273159
subclass of: SO_0000673
so part of: LOC121273159
location: complement(join(511741..511956,514930..515049,516579..516704,518212..518313,519403..519585,552510..552657,555306..555476,559750..559824,628780..629181))
location: region:511741-629181:-1
so has part: feature:628780-629181:-1:exon
so has part: feature:559750-559824:-1:exon
so has part: feature:555306-555476:-1:exon
so has part: feature:552510-552657:-1:exon
so has part: feature:519403-519585:-1:exon
so has part: feature:518212-518313:-1:exon
so has part: feature:516579-516704:-1:exon
so has part: feature:514930-515049:-1:exon
so has part: feature:511741-511956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628780-629181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559750-559824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555306-555476:-1:exon

position:555306:-1
position: 555306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555476:-1
position: 555476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552510-552657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519403-519585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:518212-518313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:516579-516704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514930-515049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511741-511956:-1:exon

LOC121273159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273159
product: forkhead box protein J2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041180131.1
SIO_010081: LOC121273159
subclass of: SO_0000673
so part of: LOC121273159
location: complement(join(511741..511956,514930..515049,516579..516704,518212..518313,519403..519585,552510..552657,558614..558694,559750..559824,628780..629181))
location: region:511741-629181:-1
so has part: feature:628780-629181:-1:exon
so has part: feature:559750-559824:-1:exon
so has part: feature:558614-558694:-1:exon
so has part: feature:552510-552657:-1:exon
so has part: feature:519403-519585:-1:exon
so has part: feature:518212-518313:-1:exon
so has part: feature:516579-516704:-1:exon
so has part: feature:514930-515049:-1:exon
so has part: feature:511741-511956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628780-629181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559750-559824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558614-558694:-1:exon

position:558614:-1
position: 558614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558694:-1
position: 558694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552510-552657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519403-519585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:518212-518313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:516579-516704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514930-515049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511741-511956:-1:exon

LOC121273159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273159
product: forkhead box protein J2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041180130.1
SIO_010081: LOC121273159
subclass of: SO_0000673
so part of: LOC121273159
location: complement(join(511741..511956,514930..515049,518212..518313,519403..519585,552510..552657,555306..555476,558614..558694,559750..559824,628780..629181))
location: region:511741-629181:-1
so has part: feature:628780-629181:-1:exon
so has part: feature:559750-559824:-1:exon
so has part: feature:558614-558694:-1:exon
so has part: feature:555306-555476:-1:exon
so has part: feature:552510-552657:-1:exon
so has part: feature:519403-519585:-1:exon
so has part: feature:518212-518313:-1:exon
so has part: feature:514930-515049:-1:exon
so has part: feature:511741-511956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628780-629181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559750-559824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558614-558694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555306-555476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552510-552657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519403-519585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518212-518313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514930-515049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511741-511956:-1:exon

LOC121273159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273159
product: forkhead box protein J2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041180128.1
SIO_010081: LOC121273159
subclass of: SO_0000673
so part of: LOC121273159
location: complement(join(511741..511956,514930..515049,516579..516704,518212..518313,519403..519585,552510..552657,555306..555476,558614..558694,559750..559824,628780..629181))
location: region:511741-629181:-1
so has part: feature:628780-629181:-1:exon
so has part: feature:559750-559824:-1:exon
so has part: feature:558614-558694:-1:exon
so has part: feature:555306-555476:-1:exon
so has part: feature:552510-552657:-1:exon
so has part: feature:519403-519585:-1:exon
so has part: feature:518212-518313:-1:exon
so has part: feature:516579-516704:-1:exon
so has part: feature:514930-515049:-1:exon
so has part: feature:511741-511956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628780-629181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559750-559824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558614-558694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555306-555476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552510-552657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519403-519585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518212-518313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:516579-516704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514930-515049:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:511741-511956:-1:exon

LOC121273159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein J2-like isoform X5
translation: MSSELESSLTSMDWLPCLSLPRTGKCSPKTRRGGTGGQGVKPPHSYASLIRMAIQSTPTGRKTLREIYQWITENFQYYQQSTHGWKNSIRHNLSMNKCFRKIPRTRETPGKVVPPDAGLAHPGVGVSREETAFTFPDLDFGDLSLSFHSLCQSIRSSRQGGPGSVPGECRTPLHTPVVSCSPLSRSPFSLLHSPTQPTSRGSEAQDRCPETPRRATGNSRKVLPPDWFTRLDSVRDALEIAGRIDWATLDLSLFPGLTENPDGEHPPLDQAGFQDLYGWLDRAFRLCGVIEAQVPGDDHMEKQTERTQPGNAELATGNKNDIPEFLTTHNKLPIPRQGSSTQRLFSSSSEIQDEFDWDSIV
SIO_010081: LOC121273159
subclass of: SO_0000673
so part of: LOC121273159
location: complement(join(511883..511956,514930..515049,516579..516704,518212..518313,519403..519585,552510..552657,559750..559824,628780..629037))
location: region:511883-629037:-1
so has part: feature:628780-629037:-1:exon
so has part: feature:559750-559824:-1:exon
so has part: feature:552510-552657:-1:exon
so has part: feature:519403-519585:-1:exon
so has part: feature:518212-518313:-1:exon
so has part: feature:516579-516704:-1:exon
so has part: feature:514930-515049:-1:exon
so has part: feature:511883-511956:-1:exon

XP_041036066.1
type: Protein
SIO_000068: ncbiprotein

position:511883:-1
position: 511883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629037:-1
position: 629037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628780-629037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559750-559824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552510-552657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519403-519585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518212-518313:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:516579-516704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514930-515049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:511883-511956:-1:exon

LOC121273159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein J3-like isoform X2
translation: MSSELESSLTSMDWLPCLSLPRTGKCSPKTRRGGTGGQGVKPPHSYASLIRMAIQSTPTGRKTLREIYQWITENFQYYQQSTHGWKNSIRHNLSMNKCFRKIPRTRETPGKSPHDLGHARASQIPDVIETSQLTHDLESTVDCSQLPGITQLNVPPLQNPGTLVPDIKVVPPDAGLAHPGVGVSREETAFTFPDLDFGDLSLSFHSLCQSIRSSRQGGPGSVPGECRTPLHTPVVSCSPLSRSPFSLLHSPTQPTSRGSEAQDRCPETPRRATGNSRKVLPPDWFTRLDSVRDALEIAGRIDWATLDLSLFPGLTENPDGEHPPLDQAGFQDLYGWLDRAFRLCGVIEAQVPGDDHMEKQTERTQPGNAELATGNKNDIPEFLTTHNKLPIPRQGSSTQRLFSSSSEIQDEFDWDSIV
SIO_010081: LOC121273159
subclass of: SO_0000673
so part of: LOC121273159
location: complement(join(511883..511956,514930..515049,516579..516704,518212..518313,519403..519585,552510..552657,555306..555476,559750..559824,628780..629037))
location: region:511883-629037:-1
so has part: feature:628780-629037:-1:exon
so has part: feature:559750-559824:-1:exon
so has part: feature:555306-555476:-1:exon
so has part: feature:552510-552657:-1:exon
so has part: feature:519403-519585:-1:exon
so has part: feature:518212-518313:-1:exon
so has part: feature:516579-516704:-1:exon
so has part: feature:514930-515049:-1:exon
so has part: feature:511883-511956:-1:exon

XP_041036063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:628780-629037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559750-559824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555306-555476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552510-552657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519403-519585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:518212-518313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:516579-516704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514930-515049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511883-511956:-1:exon

LOC121273159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein J2-like isoform X4
translation: MSSELESSLTSMDWLPCLSLPRTGKCSPKTRRGGTGGQGVKPPHSYASLIRMAIQSTPTGRKTLREIYQWITENFQYYQQSTHGWKNSIRHNLSMNKCFRKIPRTRETPGKGSYWTIAASAKEKPAPRGVKKLPKGEKVVPPDAGLAHPGVGVSREETAFTFPDLDFGDLSLSFHSLCQSIRSSRQGGPGSVPGECRTPLHTPVVSCSPLSRSPFSLLHSPTQPTSRGSEAQDRCPETPRRATGNSRKVLPPDWFTRLDSVRDALEIAGRIDWATLDLSLFPGLTENPDGEHPPLDQAGFQDLYGWLDRAFRLCGVIEAQVPGDDHMEKQTERTQPGNAELATGNKNDIPEFLTTHNKLPIPRQGSSTQRLFSSSSEIQDEFDWDSIV
SIO_010081: LOC121273159
subclass of: SO_0000673
so part of: LOC121273159
location: complement(join(511883..511956,514930..515049,516579..516704,518212..518313,519403..519585,552510..552657,558614..558694,559750..559824,628780..629037))
location: region:511883-629037:-1
so has part: feature:628780-629037:-1:exon
so has part: feature:559750-559824:-1:exon
so has part: feature:558614-558694:-1:exon
so has part: feature:552510-552657:-1:exon
so has part: feature:519403-519585:-1:exon
so has part: feature:518212-518313:-1:exon
so has part: feature:516579-516704:-1:exon
so has part: feature:514930-515049:-1:exon
so has part: feature:511883-511956:-1:exon

XP_041036065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:628780-629037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559750-559824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558614-558694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552510-552657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519403-519585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:518212-518313:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:516579-516704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514930-515049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511883-511956:-1:exon

LOC121273159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein J2-like isoform X3
translation: MSSELESSLTSMDWLPCLSLPRTGKCSPKTRRGGTGGQGVKPPHSYASLIRMAIQSTPTGRKTLREIYQWITENFQYYQQSTHGWKNSIRHNLSMNKCFRKIPRTRETPGKGSYWTIAASAKEKPAPRGVKKLPKGEKSPHDLGHARASQIPDVIETSQLTHDLESTVDCSQLPGITQLNVPPLQNPGTLVPDIKVVPPDAGLAHPGVGVSREETAFTFPDLDFGDLSLSFHSLCQSIRSSRQGGPGSVPGECRTPLHTPVVSCSPLSRSPFSLLHSPTQPTSRGSEAQDRCPETPRRATGNSRKVLPPDWFTRLDSVRDALEIAGRIDWATLDLSLFPDHMEKQTERTQPGNAELATGNKNDIPEFLTTHNKLPIPRQGSSTQRLFSSSSEIQDEFDWDSIV
SIO_010081: LOC121273159
subclass of: SO_0000673
so part of: LOC121273159
location: complement(join(511883..511956,514930..515049,518212..518313,519403..519585,552510..552657,555306..555476,558614..558694,559750..559824,628780..629037))
location: region:511883-629037:-1
so has part: feature:628780-629037:-1:exon
so has part: feature:559750-559824:-1:exon
so has part: feature:558614-558694:-1:exon
so has part: feature:555306-555476:-1:exon
so has part: feature:552510-552657:-1:exon
so has part: feature:519403-519585:-1:exon
so has part: feature:518212-518313:-1:exon
so has part: feature:514930-515049:-1:exon
so has part: feature:511883-511956:-1:exon

XP_041036064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:628780-629037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559750-559824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558614-558694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555306-555476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552510-552657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519403-519585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518212-518313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:514930-515049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511883-511956:-1:exon

LOC121273159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein J2-like isoform X1
translation: MSSELESSLTSMDWLPCLSLPRTGKCSPKTRRGGTGGQGVKPPHSYASLIRMAIQSTPTGRKTLREIYQWITENFQYYQQSTHGWKNSIRHNLSMNKCFRKIPRTRETPGKGSYWTIAASAKEKPAPRGVKKLPKGEKSPHDLGHARASQIPDVIETSQLTHDLESTVDCSQLPGITQLNVPPLQNPGTLVPDIKVVPPDAGLAHPGVGVSREETAFTFPDLDFGDLSLSFHSLCQSIRSSRQGGPGSVPGECRTPLHTPVVSCSPLSRSPFSLLHSPTQPTSRGSEAQDRCPETPRRATGNSRKVLPPDWFTRLDSVRDALEIAGRIDWATLDLSLFPGLTENPDGEHPPLDQAGFQDLYGWLDRAFRLCGVIEAQVPGDDHMEKQTERTQPGNAELATGNKNDIPEFLTTHNKLPIPRQGSSTQRLFSSSSEIQDEFDWDSIV
SIO_010081: LOC121273159
subclass of: SO_0000673
so part of: LOC121273159
location: complement(join(511883..511956,514930..515049,516579..516704,518212..518313,519403..519585,552510..552657,555306..555476,558614..558694,559750..559824,628780..629037))
location: region:511883-629037:-1
so has part: feature:628780-629037:-1:exon
so has part: feature:559750-559824:-1:exon
so has part: feature:558614-558694:-1:exon
so has part: feature:555306-555476:-1:exon
so has part: feature:552510-552657:-1:exon
so has part: feature:519403-519585:-1:exon
so has part: feature:518212-518313:-1:exon
so has part: feature:516579-516704:-1:exon
so has part: feature:514930-515049:-1:exon
so has part: feature:511883-511956:-1:exon

XP_041036062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:628780-629037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559750-559824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558614-558694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555306-555476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552510-552657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519403-519585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518212-518313:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:516579-516704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514930-515049:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:511883-511956:-1:exon

LOC121273143
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273143
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 640290..785046
location: region:640290-785046:1
so has part: feature:640290-785046:1:exon
subclass of: SO_0000010

121273143
type: Gene
SIO_000068: ncbigene

position:640290:1
position: 640290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785046:1
position: 785046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640290-785046:1:exon

LOC121273143
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273143
product: rootletin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180103.1
SIO_010081: LOC121273143
subclass of: SO_0000673
so part of: LOC121273143
location: join(640290..640303,643458..643599,645271..645465,784939..785046)
location: region:640290-785046:1
so has part: feature:640290-640303:1:exon
so has part: feature:643458-643599:1:exon
so has part: feature:645271-645465:1:exon
so has part: feature:784939-785046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:640290-640303:1:exon

position:640303:1
position: 640303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:643458-643599:1:exon

position:643458:1
position: 643458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643599:1
position: 643599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645271-645465:1:exon

position:645271:1
position: 645271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645465:1
position: 645465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:784939-785046:1:exon

position:784939:1
position: 784939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273143
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273143
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rootletin-like
translation: MANPDPLREEVGVLERELARVEDHLALTKAERDELAIKYSAVCERLEQSLMKEEGDEVVSGSPEGSEAARVNAGLRRQLEEEQIAYKRKLQTYQEGQQRQALLVQKLQGKPPPASQPAGTSSPTYQQLQRSDSLKIKPCEYYLLL
SIO_010081: LOC121273143
subclass of: SO_0000673
so part of: LOC121273143
location: join(643465..643599,645271..645465,784939..785046)
location: region:643465-785046:1
so has part: feature:643465-643599:1:exon
so has part: feature:645271-645465:1:exon
so has part: feature:784939-785046:1:exon

XP_041036037.1
type: Protein
SIO_000068: ncbiprotein

position:643465:1
position: 643465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643465-643599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645271-645465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784939-785046:1:exon

LOC121273144
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 785206..933916
location: region:785206-933916:1
so has part: feature:785206-933916:1:exon
subclass of: SO_0000010

121273144
type: Gene
SIO_000068: ncbigene

position:785206:1
position: 785206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933916:1
position: 933916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785206-933916:1:exon

LOC121273144
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273144
product: synaptobrevin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180104.1
SIO_010081: LOC121273144
subclass of: SO_0000673
so part of: LOC121273144
location: join(785206..785240,879234..879381,880353..880511,933908..933916)
location: region:785206-933916:1
so has part: feature:785206-785240:1:exon
so has part: feature:879234-879381:1:exon
so has part: feature:880353-880511:1:exon
so has part: feature:933908-933916:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:785206-785240:1:exon

position:785240:1
position: 785240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:879234-879381:1:exon

position:879234:1
position: 879234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879381:1
position: 879381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:880353-880511:1:exon

position:880353:1
position: 880353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880511:1
position: 880511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:933908-933916:1:exon

position:933908:1
position: 933908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273144
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptobrevin-like
translation: MAVSSPIRLAPTSAPAQGAPAPEVLDGQGAAPGGQPGGPPPPPPNTTSNRRLQQTQAQVEEVVDIMRVNVNKVLQRDEMLSELDDRADALQAGASQFESSAAKLKRKFWWKNCKCH
SIO_010081: LOC121273144
subclass of: SO_0000673
so part of: LOC121273144
location: join(785206..785240,879234..879381,880353..880511,933908..933916)
location: region:785206-933916:1
so has part: feature:785206-785240:1:exon
so has part: feature:879234-879381:1:exon
so has part: feature:880353-880511:1:exon
so has part: feature:933908-933916:1:exon

XP_041036038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:785206-785240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:879234-879381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880353-880511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933908-933916:1:exon

LOC121273162
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1143058..1145820
location: region:1143058-1145820:1
so has part: feature:1143058-1145820:1:exon
subclass of: SO_0000010

121273162
type: Gene
SIO_000068: ncbigene

position:1143058:1
position: 1143058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145820:1
position: 1145820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143058-1145820:1:exon

LOC121273162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273162
product: collagen alpha-1(XX) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041180136.1
SIO_010081: LOC121273162
subclass of: SO_0000673
so part of: LOC121273162
location: join(1143058..1143325,1145444..1145820)
location: region:1143058-1145820:1
so has part: feature:1143058-1143325:1:exon
so has part: feature:1145444-1145820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1143058-1143325:1:exon

position:1143325:1
position: 1143325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1145444-1145820:1:exon

position:1145444:1
position: 1145444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XX) chain-like
translation: MLTDQTPTTMEASWASPSRRLLLGYLLRQAGVGGRGSEVRLPAHVHHVTYRRLKPGTKQTVCVRAIYPRGVSQPLCATTRTPRGKVPRPILCPPFWH
SIO_010081: LOC121273162
subclass of: SO_0000673
so part of: LOC121273162
location: join(1143076..1143325,1145444..1145487)
location: region:1143076-1145487:1
so has part: feature:1143076-1143325:1:exon
so has part: feature:1145444-1145487:1:exon

XP_041036070.1
type: Protein
SIO_000068: ncbiprotein

position:1143076:1
position: 1143076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145487:1
position: 1145487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143076-1143325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145444-1145487:1:exon

LOC121273145
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1161816..1162730)
location: region:1161816-1162730:-1
so has part: feature:1161816-1162730:-1:exon
subclass of: SO_0000010

121273145
type: Gene
SIO_000068: ncbigene

position:1161816:-1
position: 1161816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162730:-1
position: 1162730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161816-1162730:-1:exon

LOC121273145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273145
product: involucrin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041180105.1
SIO_010081: LOC121273145
subclass of: SO_0000673
so part of: LOC121273145
location: complement(1161816..1162730)
location: region:1161816-1162730:-1
so has part: feature:1161816-1162730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1161816-1162730:-1:exon

LOC121273145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: involucrin-like
translation: MHSVYRLPSADQEEKLHSVYTLPSGDQEEELQSVYTLPSGDQEEELQTVYTLPSGDQEEKLHSVYMLPPGDQGEEMHSVYTSATGDQQEELHFVYTLDSGDQEAEPHSVYTPPSGDQEEKMHSFYTQPSGDPEAELHSANTPPFGDQEEELHNVYPLHSGDQDEELHFVYSLPSGEQEEELHFVYSLPSGEQEEELHFVYTSWSVDQEEETHSVYRPPSVYQEEEMHSVYRSPSGEQEGKLHAVYTLPSGDQEEELHSVYTPPSGDPEEELHSVYTPPSGDPEEELHSVHTPPFVDQEEELHFV
SIO_010081: LOC121273145
subclass of: SO_0000673
so part of: LOC121273145
location: complement(1161816..1162730)
location: region:1161816-1162730:-1
so has part: feature:1161816-1162730:-1:exon

XP_041036039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1161816-1162730:-1:exon

LOC121273146
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1166705..1167784)
location: region:1166705-1167784:-1
so has part: feature:1166705-1167784:-1:exon
subclass of: SO_0000010

121273146
type: Gene
SIO_000068: ncbigene

position:1166705:-1
position: 1166705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167784:-1
position: 1167784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166705-1167784:-1:exon

LOC121273146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273146
product: involucrin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041180106.1
SIO_010081: LOC121273146
subclass of: SO_0000673
so part of: LOC121273146
location: complement(1166705..1167784)
location: region:1166705-1167784:-1
so has part: feature:1166705-1167784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1166705-1167784:-1:exon

LOC121273146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: involucrin-like
translation: MLPPGDQGEEMHSVYMLPPGDQGEEMHSVYTSATGDQQEELHFVYTLDSGDQEAEPHSVYTPPSGDQEEKMHSFYTQPSGDPEAELHSANTPPFGDQEEELHNVYPLHSGDQDEELHFVYSLPSGEQEEELHFVYSLPSGEQEEELHFVYTSWSVDQEEETHSVYRSPSVYQEEEMHSVYRSPSGEQEGKLHAVYTLPSGDQEEVMHSVYRLPSADQEEKLHSVYTLPSGDQEEELQSVYTLPSGHQEEELHSVYTLPSGDQEEKLQSVYTLPSGDQEEKLHSVYMLPSGDQEEKLHSVYTPPSGDQEEELHSVYTPPSGDPEEELHSVYIPLSGDPEEELHSLHTPPFVDQEEELHFV
SIO_010081: LOC121273146
subclass of: SO_0000673
so part of: LOC121273146
location: complement(1166705..1167784)
location: region:1166705-1167784:-1
so has part: feature:1166705-1167784:-1:exon

XP_041036040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1166705-1167784:-1:exon

LOC121273161
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1171514..1183306)
location: region:1171514-1183306:-1
so has part: feature:1171514-1183306:-1:exon
subclass of: SO_0000010

121273161
type: Gene
SIO_000068: ncbigene

position:1171514:-1
position: 1171514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183306:-1
position: 1183306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171514-1183306:-1:exon

LOC121273161
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273161
product: C-type lectin domain family 17, member A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041180135.1
SIO_010081: LOC121273161
subclass of: SO_0000673
so part of: LOC121273161
location: complement(join(1171514..1172229,1173056..1173162,1174088..1174230,1177008..1177127,1181616..1181735,1183194..1183306))
location: region:1171514-1183306:-1
so has part: feature:1183194-1183306:-1:exon
so has part: feature:1181616-1181735:-1:exon
so has part: feature:1177008-1177127:-1:exon
so has part: feature:1174088-1174230:-1:exon
so has part: feature:1173056-1173162:-1:exon
so has part: feature:1171514-1172229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1183194-1183306:-1:exon

position:1183194:-1
position: 1183194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1181616-1181735:-1:exon

position:1181616:-1
position: 1181616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181735:-1
position: 1181735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177008-1177127:-1:exon

position:1177008:-1
position: 1177008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177127:-1
position: 1177127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1174088-1174230:-1:exon

position:1174088:-1
position: 1174088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174230:-1
position: 1174230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1173056-1173162:-1:exon

position:1173056:-1
position: 1173056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173162:-1
position: 1173162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1171514-1172229:-1:exon

position:1172229:-1
position: 1172229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273161
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 17, member A-like
translation: MNTRQSMTVPSERETGQETAGGRISITSTHLGIACLIVLIISLAIAIGLRVQVLQMDKDMTGLNGKIRNMSETLEQMLRDRRSFCNVLRNCSESLCPSGWKIHNQHCYRFSTDTVNWDSAKQLCESQTSHLIIINTEQEQNFIMKYLENKPGGYWIGLTDGESEGNWKWVDGTPVSFTQWDQGEPNNWNDNENCASIRASGWNDYICSDRFRFICETRALPSVEPADIEKYCS
SIO_010081: LOC121273161
subclass of: SO_0000673
so part of: LOC121273161
location: complement(join(1172055..1172229,1173056..1173162,1174088..1174230,1177008..1177127,1181616..1181735,1183194..1183230))
location: region:1172055-1183230:-1
so has part: feature:1183194-1183230:-1:exon
so has part: feature:1181616-1181735:-1:exon
so has part: feature:1177008-1177127:-1:exon
so has part: feature:1174088-1174230:-1:exon
so has part: feature:1173056-1173162:-1:exon
so has part: feature:1172055-1172229:-1:exon

XP_041036069.1
type: Protein
SIO_000068: ncbiprotein

position:1172055:-1
position: 1172055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183230:-1
position: 1183230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183194-1183230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181616-1181735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177008-1177127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1174088-1174230:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173056-1173162:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1172055-1172229:-1:exon

LOC121273160
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1191406..1198639)
location: region:1191406-1198639:-1
so has part: feature:1191406-1198639:-1:exon
subclass of: SO_0000010

121273160
type: Gene
SIO_000068: ncbigene

position:1191406:-1
position: 1191406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198639:-1
position: 1198639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191406-1198639:-1:exon

LOC121273160
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273160
product: C-type lectin domain family 17, member A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041180134.1
SIO_010081: LOC121273160
subclass of: SO_0000673
so part of: LOC121273160
location: complement(join(1191406..1192180,1193404..1193498,1195975..1196117,1198496..1198639))
location: region:1191406-1198639:-1
so has part: feature:1198496-1198639:-1:exon
so has part: feature:1195975-1196117:-1:exon
so has part: feature:1193404-1193498:-1:exon
so has part: feature:1191406-1192180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1198496-1198639:-1:exon

position:1198496:-1
position: 1198496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1195975-1196117:-1:exon

position:1195975:-1
position: 1195975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196117:-1
position: 1196117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1193404-1193498:-1:exon

position:1193404:-1
position: 1193404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193498:-1
position: 1193498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1191406-1192180:-1:exon

position:1192180:-1
position: 1192180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 17, member A-like
translation: MNKDHVEGDLLNRTLAIALRNLTELNGKFQKLSETVQSLCPMLRNCSESLCPSGWKIHNQHCYRFSTDTVNWDSAKQQCESQTSHLIIINTEQEQNSLENNPGDYWIGLTDRESEGNWKWVDGTPVSFTRWDQGEPNNWNGHENCAIIRSGCWNDFRCTRYYRFICEKRALPCVEAADIEKYCS
SIO_010081: LOC121273160
subclass of: SO_0000673
so part of: LOC121273160
location: complement(join(1192006..1192180,1193404..1193498,1195975..1196117,1198496..1198637))
location: region:1192006-1198637:-1
so has part: feature:1198496-1198637:-1:exon
so has part: feature:1195975-1196117:-1:exon
so has part: feature:1193404-1193498:-1:exon
so has part: feature:1192006-1192180:-1:exon

XP_041036068.1
type: Protein
SIO_000068: ncbiprotein

position:1192006:-1
position: 1192006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198637:-1
position: 1198637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198496-1198637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195975-1196117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1193404-1193498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1192006-1192180:-1:exon

LOC121273147
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1297717..1315237)
location: region:1297717-1315237:-1
so has part: feature:1297717-1315237:-1:exon
subclass of: SO_0000010

121273147
type: Gene
SIO_000068: ncbigene

position:1297717:-1
position: 1297717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315237:-1
position: 1315237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297717-1315237:-1:exon

LOC121273147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273147
product: C-type lectin domain family 4 member E-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180107.1
SIO_010081: LOC121273147
subclass of: SO_0000673
so part of: LOC121273147
location: complement(join(1297717..1297891,1299198..1299304,1300390..1300532,1301357..1301506,1313880..1313999,1315171..1315237))
location: region:1297717-1315237:-1
so has part: feature:1315171-1315237:-1:exon
so has part: feature:1313880-1313999:-1:exon
so has part: feature:1301357-1301506:-1:exon
so has part: feature:1300390-1300532:-1:exon
so has part: feature:1299198-1299304:-1:exon
so has part: feature:1297717-1297891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1315171-1315237:-1:exon

position:1315171:-1
position: 1315171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1313880-1313999:-1:exon

position:1313880:-1
position: 1313880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313999:-1
position: 1313999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1301357-1301506:-1:exon

position:1301357:-1
position: 1301357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301506:-1
position: 1301506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1300390-1300532:-1:exon

position:1300390:-1
position: 1300390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300532:-1
position: 1300532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1299198-1299304:-1:exon

position:1299198:-1
position: 1299198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299304:-1
position: 1299304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1297717-1297891:-1:exon

position:1297891:-1
position: 1297891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 4 member E-like
translation: MEQDTDYMNMRHIKNNTTPPSERETGQETAGGRISITSTHLGIACLIVLIISLAIAIGLRVQGLQMNKECGCSVPLNRTLTFALWKLTELDGKLQKLSEAVLSLCSILGNYSESLCPSGWKIHNQHCYRFSTDTVNWDSAKQQCESQTSHLIIINTEQEQNFIKKSLESNPGDYWIGLTDRESEGNWKWVDGTPVSFTQWYQGKPNNWKGNENCALIRTSGWNDYICSDHFPFICEKRALTCVEAADIEKYCS
SIO_010081: LOC121273147
subclass of: SO_0000673
so part of: LOC121273147
location: complement(join(1297717..1297891,1299198..1299304,1300390..1300532,1301357..1301506,1313880..1313999,1315171..1315237))
location: region:1297717-1315237:-1
so has part: feature:1315171-1315237:-1:exon
so has part: feature:1313880-1313999:-1:exon
so has part: feature:1301357-1301506:-1:exon
so has part: feature:1300390-1300532:-1:exon
so has part: feature:1299198-1299304:-1:exon
so has part: feature:1297717-1297891:-1:exon

XP_041036041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1315171-1315237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1313880-1313999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1301357-1301506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1300390-1300532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1299198-1299304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1297717-1297891:-1:exon

LOC121273155
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1325346..1346430)
location: region:1325346-1346430:-1
so has part: feature:1325346-1346430:-1:exon
subclass of: SO_0000010

121273155
type: Gene
SIO_000068: ncbigene

position:1325346:-1
position: 1325346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346430:-1
position: 1346430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325346-1346430:-1:exon

LOC121273155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273155
product: CD209 antigen-like protein E, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041180121.1
SIO_010081: LOC121273155
subclass of: SO_0000673
so part of: LOC121273155
location: complement(join(1325346..1326136,1327456..1327562,1329123..1329265,1331848..1331967,1337130..1337249,1338323..1338409,1339213..1339284,1346269..1346430))
location: region:1325346-1346430:-1
so has part: feature:1346269-1346430:-1:exon
so has part: feature:1339213-1339284:-1:exon
so has part: feature:1338323-1338409:-1:exon
so has part: feature:1337130-1337249:-1:exon
so has part: feature:1331848-1331967:-1:exon
so has part: feature:1329123-1329265:-1:exon
so has part: feature:1327456-1327562:-1:exon
so has part: feature:1325346-1326136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1346269-1346430:-1:exon

position:1346269:-1
position: 1346269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1339213-1339284:-1:exon

position:1339213:-1
position: 1339213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339284:-1
position: 1339284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1338323-1338409:-1:exon

position:1338323:-1
position: 1338323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338409:-1
position: 1338409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1337130-1337249:-1:exon

position:1337130:-1
position: 1337130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1337249:-1
position: 1337249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1331848-1331967:-1:exon

position:1331848:-1
position: 1331848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331967:-1
position: 1331967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1329123-1329265:-1:exon

position:1329123:-1
position: 1329123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329265:-1
position: 1329265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1327456-1327562:-1:exon

position:1327456:-1
position: 1327456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327562:-1
position: 1327562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1325346-1326136:-1:exon

position:1326136:-1
position: 1326136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273155
product: CD209 antigen-like protein E, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041180120.1
SIO_010081: LOC121273155
subclass of: SO_0000673
so part of: LOC121273155
location: complement(join(1325346..1326136,1327456..1327562,1329123..1329265,1331848..1331967,1337130..1337249,1338323..1338409,1339213..1339284,1343802..1343943))
location: region:1325346-1343943:-1
so has part: feature:1343802-1343943:-1:exon
so has part: feature:1339213-1339284:-1:exon
so has part: feature:1338323-1338409:-1:exon
so has part: feature:1337130-1337249:-1:exon
so has part: feature:1331848-1331967:-1:exon
so has part: feature:1329123-1329265:-1:exon
so has part: feature:1327456-1327562:-1:exon
so has part: feature:1325346-1326136:-1:exon

position:1343943:-1
position: 1343943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343802-1343943:-1:exon

position:1343802:-1
position: 1343802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1339213-1339284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1338323-1338409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1337130-1337249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1331848-1331967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1329123-1329265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327456-1327562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325346-1326136:-1:exon

LOC121273155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273155
product: CD209 antigen-like protein E, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041180123.1
SIO_010081: LOC121273155
subclass of: SO_0000673
so part of: LOC121273155
location: complement(join(1325346..1326136,1327456..1327562,1329123..1329265,1331848..1331967,1337130..1337249,1338323..1338409,1339213..1339284,1341599..1341737))
location: region:1325346-1341737:-1
so has part: feature:1341599-1341737:-1:exon
so has part: feature:1339213-1339284:-1:exon
so has part: feature:1338323-1338409:-1:exon
so has part: feature:1337130-1337249:-1:exon
so has part: feature:1331848-1331967:-1:exon
so has part: feature:1329123-1329265:-1:exon
so has part: feature:1327456-1327562:-1:exon
so has part: feature:1325346-1326136:-1:exon

position:1341737:-1
position: 1341737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341599-1341737:-1:exon

position:1341599:-1
position: 1341599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1339213-1339284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1338323-1338409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1337130-1337249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1331848-1331967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1329123-1329265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327456-1327562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325346-1326136:-1:exon

LOC121273155
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273155
product: CD209 antigen-like protein E, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041180122.1
SIO_010081: LOC121273155
subclass of: SO_0000673
so part of: LOC121273155
location: complement(join(1325346..1326136,1327456..1327562,1329123..1329265,1331848..1331967,1337130..1337249,1338323..1338409,1339213..1339284,1340662..1340796))
location: region:1325346-1340796:-1
so has part: feature:1340662-1340796:-1:exon
so has part: feature:1339213-1339284:-1:exon
so has part: feature:1338323-1338409:-1:exon
so has part: feature:1337130-1337249:-1:exon
so has part: feature:1331848-1331967:-1:exon
so has part: feature:1329123-1329265:-1:exon
so has part: feature:1327456-1327562:-1:exon
so has part: feature:1325346-1326136:-1:exon

position:1340796:-1
position: 1340796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340662-1340796:-1:exon

position:1340662:-1
position: 1340662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1339213-1339284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1338323-1338409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1337130-1337249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1331848-1331967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1329123-1329265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327456-1327562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325346-1326136:-1:exon

LOC121273155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD209 antigen-like protein E isoform X2
translation: MEQDTDYMNMRHIKNSTTDSSEHDLEISYAELNLLPASGTSKLHTTGEQEPSYAQVNFTPQSPQQNQVPEVTPDKDKTGQETAGGRRSKISRCLIVVGLIVLICGLAIITGLTVHVLQMDKDMTGLNGKIRNMSETLEQMLRDRRSFCTVFRNCSESLCPSGWKIHNQHCYRFSTDKVNWESAKQQCESQNSHLIIINTEQEQNFIKKSIENNPGDYWIGLTDRESEGNWKWVDGTQVSFTQWYEGEPNNSKGNENCAIIRRTDWNDVSCTDHFLFICEKRAPPCVEPADIEKYCS
SIO_010081: LOC121273155
subclass of: SO_0000673
so part of: LOC121273155
location: complement(join(1325962..1326136,1327456..1327562,1329123..1329265,1331848..1331967,1337130..1337249,1338323..1338409,1339213..1339284,1346269..1346335))
location: region:1325962-1346335:-1
so has part: feature:1346269-1346335:-1:exon
so has part: feature:1339213-1339284:-1:exon
so has part: feature:1338323-1338409:-1:exon
so has part: feature:1337130-1337249:-1:exon
so has part: feature:1331848-1331967:-1:exon
so has part: feature:1329123-1329265:-1:exon
so has part: feature:1327456-1327562:-1:exon
so has part: feature:1325962-1326136:-1:exon

XP_041036055.1
type: Protein
SIO_000068: ncbiprotein

position:1325962:-1
position: 1325962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346335:-1
position: 1346335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1346269-1346335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1339213-1339284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1338323-1338409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1337130-1337249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1331848-1331967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1329123-1329265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327456-1327562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325962-1326136:-1:exon

LOC121273155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD209 antigen-like protein E isoform X1
translation: MEQDTDYMNMRHIKNSTTDPSEHDLEISYAELNLLPASGTSKLHTTGEQEPSYAQVNFTPQSPQQNQVPEVTPDKDKTGQETAGGRRSKISRCLIVVGLIVLICGLAIITGLTVHVLQMDKDMTGLNGKIRNMSETLEQMLRDRRSFCTVFRNCSESLCPSGWKIHNQHCYRFSTDKVNWESAKQQCESQNSHLIIINTEQEQNFIKKSIENNPGDYWIGLTDRESEGNWKWVDGTQVSFTQWYEGEPNNSKGNENCAIIRRTDWNDVSCTDHFLFICEKRAPPCVEPADIEKYCS
SIO_010081: LOC121273155
subclass of: SO_0000673
so part of: LOC121273155
location: complement(join(1325962..1326136,1327456..1327562,1329123..1329265,1331848..1331967,1337130..1337249,1338323..1338409,1339213..1339284,1343802..1343868))
location: region:1325962-1343868:-1
so has part: feature:1343802-1343868:-1:exon
so has part: feature:1339213-1339284:-1:exon
so has part: feature:1338323-1338409:-1:exon
so has part: feature:1337130-1337249:-1:exon
so has part: feature:1331848-1331967:-1:exon
so has part: feature:1329123-1329265:-1:exon
so has part: feature:1327456-1327562:-1:exon
so has part: feature:1325962-1326136:-1:exon

XP_041036054.1
type: Protein
SIO_000068: ncbiprotein

position:1343868:-1
position: 1343868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1343802-1343868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1339213-1339284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1338323-1338409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1337130-1337249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1331848-1331967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1329123-1329265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327456-1327562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325962-1326136:-1:exon

LOC121273155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD209 antigen-like protein E isoform X4
translation: MEQDTDYMNMRHIKNNMTGPSEYDLEISYAELNLLPASGTSKLHTTGEQEPSYAQVNFTPQSPQQNQVPEVTPDKDKTGQETAGGRRSKISRCLIVVGLIVLICGLAIITGLTVHVLQMDKDMTGLNGKIRNMSETLEQMLRDRRSFCTVFRNCSESLCPSGWKIHNQHCYRFSTDKVNWESAKQQCESQNSHLIIINTEQEQNFIKKSIENNPGDYWIGLTDRESEGNWKWVDGTQVSFTQWYEGEPNNSKGNENCAIIRRTDWNDVSCTDHFLFICEKRAPPCVEPADIEKYCS
SIO_010081: LOC121273155
subclass of: SO_0000673
so part of: LOC121273155
location: complement(join(1325962..1326136,1327456..1327562,1329123..1329265,1331848..1331967,1337130..1337249,1338323..1338409,1339213..1339284,1341599..1341665))
location: region:1325962-1341665:-1
so has part: feature:1341599-1341665:-1:exon
so has part: feature:1339213-1339284:-1:exon
so has part: feature:1338323-1338409:-1:exon
so has part: feature:1337130-1337249:-1:exon
so has part: feature:1331848-1331967:-1:exon
so has part: feature:1329123-1329265:-1:exon
so has part: feature:1327456-1327562:-1:exon
so has part: feature:1325962-1326136:-1:exon

XP_041036057.1
type: Protein
SIO_000068: ncbiprotein

position:1341665:-1
position: 1341665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341599-1341665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1339213-1339284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1338323-1338409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1337130-1337249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1331848-1331967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1329123-1329265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327456-1327562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325962-1326136:-1:exon

LOC121273155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273155
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD209 antigen-like protein E isoform X3
translation: MEQDTDYMNMRHIKNNTTDPSEHDLEISYAELNLLPASGTSKLHTTGEQEPSYAQVNFTPQSPQQNQVPEVTPDKDKTGQETAGGRRSKISRCLIVVGLIVLICGLAIITGLTVHVLQMDKDMTGLNGKIRNMSETLEQMLRDRRSFCTVFRNCSESLCPSGWKIHNQHCYRFSTDKVNWESAKQQCESQNSHLIIINTEQEQNFIKKSIENNPGDYWIGLTDRESEGNWKWVDGTQVSFTQWYEGEPNNSKGNENCAIIRRTDWNDVSCTDHFLFICEKRAPPCVEPADIEKYCS
SIO_010081: LOC121273155
subclass of: SO_0000673
so part of: LOC121273155
location: complement(join(1325962..1326136,1327456..1327562,1329123..1329265,1331848..1331967,1337130..1337249,1338323..1338409,1339213..1339284,1340662..1340728))
location: region:1325962-1340728:-1
so has part: feature:1340662-1340728:-1:exon
so has part: feature:1339213-1339284:-1:exon
so has part: feature:1338323-1338409:-1:exon
so has part: feature:1337130-1337249:-1:exon
so has part: feature:1331848-1331967:-1:exon
so has part: feature:1329123-1329265:-1:exon
so has part: feature:1327456-1327562:-1:exon
so has part: feature:1325962-1326136:-1:exon

XP_041036056.1
type: Protein
SIO_000068: ncbiprotein

position:1340728:-1
position: 1340728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340662-1340728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1339213-1339284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1338323-1338409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1337130-1337249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1331848-1331967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1329123-1329265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327456-1327562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325962-1326136:-1:exon

LOC121273148
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1459607..1464527
location: region:1459607-1464527:1
so has part: feature:1459607-1464527:1:exon
subclass of: SO_0000010

121273148
type: Gene
SIO_000068: ncbigene

position:1459607:1
position: 1459607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464527:1
position: 1464527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459607-1464527:1:exon

LOC121273148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273148
product: hepatic lectin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180108.1
SIO_010081: LOC121273148
subclass of: SO_0000673
so part of: LOC121273148
location: join(1459607..1459613,1460278..1460420,1462584..1462690,1463856..1464527)
location: region:1459607-1464527:1
so has part: feature:1459607-1459613:1:exon
so has part: feature:1460278-1460420:1:exon
so has part: feature:1462584-1462690:1:exon
so has part: feature:1463856-1464527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1459607-1459613:1:exon

position:1459613:1
position: 1459613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1460278-1460420:1:exon

position:1460278:1
position: 1460278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460420:1
position: 1460420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1462584-1462690:1:exon

position:1462584:1
position: 1462584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1462690:1
position: 1462690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1463856-1464527:1:exon

position:1463856:1
position: 1463856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatic lectin-like
translation: MEESLCPSGWEVHNQHCYRFSTDTVNWNSAKQQCESQTSHLIIINTEQEQNFIKKSLENNPGHYWIGLTDGESEGNWKWVDGTPMSFTQWYEGEPNNWNDNENCTIIRASGWNDYSCSDRFRFICEKRALPCVEAADIEKYCS
SIO_010081: LOC121273148
subclass of: SO_0000673
so part of: LOC121273148
location: join(1459607..1459613,1460278..1460420,1462584..1462690,1463856..1464030)
location: region:1459607-1464030:1
so has part: feature:1459607-1459613:1:exon
so has part: feature:1460278-1460420:1:exon
so has part: feature:1462584-1462690:1:exon
so has part: feature:1463856-1464030:1:exon

XP_041036042.1
type: Protein
SIO_000068: ncbiprotein

position:1464030:1
position: 1464030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459607-1459613:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1460278-1460420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1462584-1462690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1463856-1464030:1:exon

eif3c
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: eif3c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1995836..>2043076
location: region:1995836-2043076:1
so has part: feature:1995836-2043076:1:exon
subclass of: SO_0000010

121273149
type: Gene
SIO_000068: ncbigene

position:1995836:1
position: 1995836
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2043076:1
position: 2043076
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1995836-2043076:1:exon

eif3c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: eif3c
product: eukaryotic translation initiation factor 3, subunit C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041180110.1
SIO_010081: eif3c
subclass of: SO_0000673
so part of: eif3c
location: join(<1995836..1995958,2001228..2001352,2022744..2022906,2023157..2023260,2024616..2024757,2025432..2025557,2028886..2028979,2030314..2030501,2034068..2034292,2035098..2035461,2036899..2037058,2037797..2037862,2041302..2041389,2042891..>2043076)
location: region:1995836-2043076:1
so has part: feature:1995836-1995958:1:exon
so has part: feature:2001228-2001352:1:exon
so has part: feature:2022744-2022906:1:exon
so has part: feature:2023157-2023260:1:exon
so has part: feature:2024616-2024757:1:exon
so has part: feature:2025432-2025557:1:exon
so has part: feature:2028886-2028979:1:exon
so has part: feature:2030314-2030501:1:exon
so has part: feature:2034068-2034292:1:exon
so has part: feature:2035098-2035461:1:exon
so has part: feature:2036899-2037058:1:exon
so has part: feature:2037797-2037862:1:exon
so has part: feature:2041302-2041389:1:exon
so has part: feature:2042891-2043076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1995836-1995958:1:exon

position:1995958:1
position: 1995958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2001228-2001352:1:exon

position:2001228:1
position: 2001228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2001352:1
position: 2001352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2022744-2022906:1:exon

position:2022744:1
position: 2022744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022906:1
position: 2022906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2023157-2023260:1:exon

position:2023157:1
position: 2023157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023260:1
position: 2023260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2024616-2024757:1:exon

position:2024616:1
position: 2024616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024757:1
position: 2024757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2025432-2025557:1:exon

position:2025432:1
position: 2025432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025557:1
position: 2025557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2028886-2028979:1:exon

position:2028886:1
position: 2028886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028979:1
position: 2028979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2030314-2030501:1:exon

position:2030314:1
position: 2030314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2030501:1
position: 2030501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2034068-2034292:1:exon

position:2034068:1
position: 2034068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2034292:1
position: 2034292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2035098-2035461:1:exon

position:2035098:1
position: 2035098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2035461:1
position: 2035461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2036899-2037058:1:exon

position:2036899:1
position: 2036899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037058:1
position: 2037058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2037797-2037862:1:exon

position:2037797:1
position: 2037797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037862:1
position: 2037862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2041302-2041389:1:exon

position:2041302:1
position: 2041302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2041389:1
position: 2041389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2042891-2043076:1:exon

position:2042891:1
position: 2042891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

eif3c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: eif3c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit C
translation: SAASADDDDDDDDDDIEVSASVFLKKAEPAPESKKLAKKQEEEEDEDDDDDDEDWGTPSDESDSESDDDDSKYTSLAHKFLKKQPTEDEKRAADRKRDDKMKKRMERKDKKKNEDEDEEDNEGGEWKPVKGGAPMVSEKPKMFAKGTEINHTVVLKKLNEILQARGKKGTDRAAQIEMLTELCTISVAHNLGEGIMLKIKFNIVASLYDYNPNLASCMKQDMWRKCLGCVDNLLDILFECPNIFIGENIGEDSENLSNAEQPYRVRGCILTLVERMDEEFTKIMQSTDPHSQEYVENLKDESRVCQIVERLQRYLEMKGSTEEICRVYLRRIMHTYYKFDYKAHQRQQPPADQSKSEQDQTESEAEDSGLLMDRLCKYIYAKDRTDRIRTCAILCHIYHHALHNRWFQARDLMLMSHLQDNIQHADPPVQILYNRTMVQLGICAFRQGMIKDAHNALLDIQSSGRAKELLGQGLLMRNMQERNQEQEKIEKRRQIPFHMHINLELLECVYLVSAMLLEIPYMAGHEFDARRRMISKQFHHQLRVGERQPLLGPPESMREHVVAASKSMKMGDWKTCNNYIINEKMNAKVWDLFPGADRVREMLVRKIQEESLRTYLFTYSSVYDSISMHTLADMFELEIHIVHSIISKMIINEELMASLDQPTQTVVMHRTEPTSLQNMALQLAEKLGNLVENNERVFDLKQGTYSGYFSRGEGEREE
SIO_010081: eif3c
subclass of: SO_0000673
so part of: eif3c
location: join(<1995836..1995958,2001228..2001352,2022744..2022906,2023157..2023260,2024616..2024757,2025432..2025557,2028886..2028979,2030314..2030501,2034068..2034292,2035098..2035461,2036899..2037058,2037797..2037862,2041302..2041389,2042891..>2043076)
location: region:1995836-2043076:1
so has part: feature:1995836-1995958:1:exon
so has part: feature:2001228-2001352:1:exon
so has part: feature:2022744-2022906:1:exon
so has part: feature:2023157-2023260:1:exon
so has part: feature:2024616-2024757:1:exon
so has part: feature:2025432-2025557:1:exon
so has part: feature:2028886-2028979:1:exon
so has part: feature:2030314-2030501:1:exon
so has part: feature:2034068-2034292:1:exon
so has part: feature:2035098-2035461:1:exon
so has part: feature:2036899-2037058:1:exon
so has part: feature:2037797-2037862:1:exon
so has part: feature:2041302-2041389:1:exon
so has part: feature:2042891-2043076:1:exon

XP_041036044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1995836-1995958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2001228-2001352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2022744-2022906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2023157-2023260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2024616-2024757:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2025432-2025557:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2028886-2028979:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2030314-2030501:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2034068-2034292:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2035098-2035461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2036899-2037058:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2037797-2037862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2041302-2041389:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2042891-2043076:1:exon

LOC121273157
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2232058..2244961
location: region:2232058-2244961:1
so has part: feature:2232058-2244961:1:exon
subclass of: SO_0000010

121273157
type: Gene
SIO_000068: ncbigene

position:2232058:1
position: 2232058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2244961:1
position: 2244961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2232058-2244961:1:exon

LOC121273157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273157
product: C-type lectin domain family 4 member E-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180125.1
SIO_010081: LOC121273157
subclass of: SO_0000673
so part of: LOC121273157
location: join(2232058..2232190,2232693..2232764,2233568..2233648,2235561..2235677,2237470..2237589,2240699..2240841,2242662..2242768,2244247..2244961)
location: region:2232058-2244961:1
so has part: feature:2232058-2232190:1:exon
so has part: feature:2232693-2232764:1:exon
so has part: feature:2233568-2233648:1:exon
so has part: feature:2235561-2235677:1:exon
so has part: feature:2237470-2237589:1:exon
so has part: feature:2240699-2240841:1:exon
so has part: feature:2242662-2242768:1:exon
so has part: feature:2244247-2244961:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2232058-2232190:1:exon

position:2232190:1
position: 2232190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2232693-2232764:1:exon

position:2232693:1
position: 2232693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2232764:1
position: 2232764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2233568-2233648:1:exon

position:2233568:1
position: 2233568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2233648:1
position: 2233648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2235561-2235677:1:exon

position:2235561:1
position: 2235561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2235677:1
position: 2235677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2237470-2237589:1:exon

position:2237470:1
position: 2237470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2237589:1
position: 2237589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2240699-2240841:1:exon

position:2240699:1
position: 2240699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2240841:1
position: 2240841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2242662-2242768:1:exon

position:2242662:1
position: 2242662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2242768:1
position: 2242768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2244247-2244961:1:exon

position:2244247:1
position: 2244247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273157
product: C-type lectin domain family 4 member E-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041180126.1
SIO_010081: LOC121273157
subclass of: SO_0000673
so part of: LOC121273157
location: join(2232062..2232190,2232693..2232764,2235561..2235677,2237470..2237589,2240699..2240841,2242662..2242768,2244247..2244961)
location: region:2232062-2244961:1
so has part: feature:2232062-2232190:1:exon
so has part: feature:2232693-2232764:1:exon
so has part: feature:2235561-2235677:1:exon
so has part: feature:2237470-2237589:1:exon
so has part: feature:2240699-2240841:1:exon
so has part: feature:2242662-2242768:1:exon
so has part: feature:2244247-2244961:1:exon

position:2232062:1
position: 2232062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2232062-2232190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2232693-2232764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2235561-2235677:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2237470-2237589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2240699-2240841:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2242662-2242768:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2244247-2244961:1:exon

LOC121273157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 4 member E-like isoform X1
translation: MEQDSDYMKMRNIKNNTTAPSEHDLEISYSELNLPPASGTSQVRTAGEQEPSYAQVNFTPQSPHQGPEVTPGKGETGQETAGRSSKKSRCLSVVGLTVLMCGLAIITGLTVHVLQMDKDMTGLNGKIRNMSETLEQMLRDRRSFCTVFQNCSESLCPSGWEDHNQHCYRFSTDTVNWDSAKQQCESENSHLIIINTEQEQNFIKKFLENNPWGYWIGLTDGESEGNWKWVDGTPVSFTQWDQGEPNNWNDNENCAIIRASGWNDYSCSDQFRFICEKRALTCVEAADIEKYCS
SIO_010081: LOC121273157
subclass of: SO_0000673
so part of: LOC121273157
location: join(2232124..2232190,2232693..2232764,2233568..2233648,2235561..2235677,2237470..2237589,2240699..2240841,2242662..2242768,2244247..2244421)
location: region:2232124-2244421:1
so has part: feature:2232124-2232190:1:exon
so has part: feature:2232693-2232764:1:exon
so has part: feature:2233568-2233648:1:exon
so has part: feature:2235561-2235677:1:exon
so has part: feature:2237470-2237589:1:exon
so has part: feature:2240699-2240841:1:exon
so has part: feature:2242662-2242768:1:exon
so has part: feature:2244247-2244421:1:exon

XP_041036059.1
type: Protein
SIO_000068: ncbiprotein

position:2232124:1
position: 2232124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2244421:1
position: 2244421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2232124-2232190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2232693-2232764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2233568-2233648:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2235561-2235677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2237470-2237589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2240699-2240841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2242662-2242768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2244247-2244421:1:exon

LOC121273157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 10 member A-like isoform X2
translation: MEQDSDYMKMRNIKNNTTAPSEHDLEISYSELNLPPASGTSQVRTAGETGQETAGRSSKKSRCLSVVGLTVLMCGLAIITGLTVHVLQMDKDMTGLNGKIRNMSETLEQMLRDRRSFCTVFQNCSESLCPSGWEDHNQHCYRFSTDTVNWDSAKQQCESENSHLIIINTEQEQNFIKKFLENNPWGYWIGLTDGESEGNWKWVDGTPVSFTQWDQGEPNNWNDNENCAIIRASGWNDYSCSDQFRFICEKRALTCVEAADIEKYCS
SIO_010081: LOC121273157
subclass of: SO_0000673
so part of: LOC121273157
location: join(2232124..2232190,2232693..2232764,2235561..2235677,2237470..2237589,2240699..2240841,2242662..2242768,2244247..2244421)
location: region:2232124-2244421:1
so has part: feature:2232124-2232190:1:exon
so has part: feature:2232693-2232764:1:exon
so has part: feature:2235561-2235677:1:exon
so has part: feature:2237470-2237589:1:exon
so has part: feature:2240699-2240841:1:exon
so has part: feature:2242662-2242768:1:exon
so has part: feature:2244247-2244421:1:exon

XP_041036060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2232124-2232190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2232693-2232764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2235561-2235677:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2237470-2237589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2240699-2240841:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2242662-2242768:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2244247-2244421:1:exon

LOC121273154
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2250176..2422068
location: region:2250176-2422068:1
so has part: feature:2250176-2422068:1:exon
subclass of: SO_0000010

121273154
type: Gene
SIO_000068: ncbigene

position:2250176:1
position: 2250176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2422068:1
position: 2422068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2250176-2422068:1:exon

LOC121273154
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273154
product: C-type lectin domain family 17, member A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041180118.1
SIO_010081: LOC121273154
subclass of: SO_0000673
so part of: LOC121273154
location: join(2250176..2250289,2413063..2413134,2413936..2414022,2415326..2415445,2418254..2418403,2419139..2419284,2420330..2420424,2421351..2422068)
location: region:2250176-2422068:1
so has part: feature:2250176-2250289:1:exon
so has part: feature:2413063-2413134:1:exon
so has part: feature:2413936-2414022:1:exon
so has part: feature:2415326-2415445:1:exon
so has part: feature:2418254-2418403:1:exon
so has part: feature:2419139-2419284:1:exon
so has part: feature:2420330-2420424:1:exon
so has part: feature:2421351-2422068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2250176-2250289:1:exon

position:2250289:1
position: 2250289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2413063-2413134:1:exon

position:2413063:1
position: 2413063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413134:1
position: 2413134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2413936-2414022:1:exon

position:2413936:1
position: 2413936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2414022:1
position: 2414022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2415326-2415445:1:exon

position:2415326:1
position: 2415326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2415445:1
position: 2415445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2418254-2418403:1:exon

position:2418254:1
position: 2418254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2418403:1
position: 2418403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2419139-2419284:1:exon

position:2419139:1
position: 2419139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2419284:1
position: 2419284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2420330-2420424:1:exon

position:2420330:1
position: 2420330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420424:1
position: 2420424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2421351-2422068:1:exon

position:2421351:1
position: 2421351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 17, member A-like isoform X2
translation: MEQDTNYMNMRHIKNSTTAPSEHDLEISYAELNLLPASGTSKPHTTGEQEPSYAQVNFTPQSPQQNQVPEVTPDKDEIGKETAGGRRSKKSRCLIVVGIIVIICNFVIITGLTVHVLQMNKEHVEDDPLNRTLAIALRNLTELNGKFQKLSETAQSLCPMLRSCSAESLCPSGWEDHNHHCYRFSTDTVNWDSAKQQCESLNSHLIIINTEQEQKSIENYPGDYWIGLTDRGSEGNWTWVDGTPVSFTQWYGGEPNNWNDHENCAFIRRTDWNDVSCTDQFRFICEKRALPCVEPADIEKYCS
SIO_010081: LOC121273154
subclass of: SO_0000673
so part of: LOC121273154
location: join(2250223..2250289,2413063..2413134,2413936..2414022,2415326..2415445,2418254..2418403,2419139..2419284,2420330..2420424,2421351..2421525)
location: region:2250223-2421525:1
so has part: feature:2250223-2250289:1:exon
so has part: feature:2413063-2413134:1:exon
so has part: feature:2413936-2414022:1:exon
so has part: feature:2415326-2415445:1:exon
so has part: feature:2418254-2418403:1:exon
so has part: feature:2419139-2419284:1:exon
so has part: feature:2420330-2420424:1:exon
so has part: feature:2421351-2421525:1:exon

XP_041036052.1
type: Protein
SIO_000068: ncbiprotein

position:2250223:1
position: 2250223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2421525:1
position: 2421525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2250223-2250289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2413063-2413134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2413936-2414022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2415326-2415445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2418254-2418403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2419139-2419284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2420330-2420424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2421351-2421525:1:exon

LOC121273154
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273154
product: C-type lectin domain family 17, member A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180117.1
SIO_010081: LOC121273154
subclass of: SO_0000673
so part of: LOC121273154
location: join(2411304..2411461,2413063..2413134,2413936..2414022,2415326..2415445,2418254..2418403,2419139..2419284,2420330..2420424,2421351..2422068)
location: region:2411304-2422068:1
so has part: feature:2411304-2411461:1:exon
so has part: feature:2413063-2413134:1:exon
so has part: feature:2413936-2414022:1:exon
so has part: feature:2415326-2415445:1:exon
so has part: feature:2418254-2418403:1:exon
so has part: feature:2419139-2419284:1:exon
so has part: feature:2420330-2420424:1:exon
so has part: feature:2421351-2422068:1:exon

position:2411304:1
position: 2411304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2411304-2411461:1:exon

position:2411461:1
position: 2411461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2413063-2413134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2413936-2414022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2415326-2415445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2418254-2418403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2419139-2419284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2420330-2420424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2421351-2422068:1:exon

LOC121273154
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273154
product: C-type lectin domain family 17, member A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180119.1
SIO_010081: LOC121273154
subclass of: SO_0000673
so part of: LOC121273154
location: join(2411315..2411461,2413063..2413134,2413936..2414022,2415326..2415445,2418254..2418403,2419142..2419284,2420330..2420424,2421351..2422068)
location: region:2411315-2422068:1
so has part: feature:2411315-2411461:1:exon
so has part: feature:2413063-2413134:1:exon
so has part: feature:2413936-2414022:1:exon
so has part: feature:2415326-2415445:1:exon
so has part: feature:2418254-2418403:1:exon
so has part: feature:2419142-2419284:1:exon
so has part: feature:2420330-2420424:1:exon
so has part: feature:2421351-2422068:1:exon

position:2411315:1
position: 2411315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2411315-2411461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2413063-2413134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2413936-2414022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2415326-2415445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2418254-2418403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2419142-2419284:1:exon

position:2419142:1
position: 2419142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2420330-2420424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2421351-2422068:1:exon

LOC121273154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 17, member A-like isoform X1
translation: MEQDTNYMNMRHIKNNTTAPSEHDLEISYAELNLLPASGTSKPHTTGEQEPSYAQVNFTPQSPQQNQVPEVTPDKDEIGKETAGGRRSKKSRCLIVVGIIVIICNFVIITGLTVHVLQMNKEHVEDDPLNRTLAIALRNLTELNGKFQKLSETAQSLCPMLRSCSAESLCPSGWEDHNHHCYRFSTDTVNWDSAKQQCESLNSHLIIINTEQEQKSIENYPGDYWIGLTDRGSEGNWTWVDGTPVSFTQWYGGEPNNWNDHENCAFIRRTDWNDVSCTDQFRFICEKRALPCVEPADIEKYCS
SIO_010081: LOC121273154
subclass of: SO_0000673
so part of: LOC121273154
location: join(2411395..2411461,2413063..2413134,2413936..2414022,2415326..2415445,2418254..2418403,2419139..2419284,2420330..2420424,2421351..2421525)
location: region:2411395-2421525:1
so has part: feature:2411395-2411461:1:exon
so has part: feature:2413063-2413134:1:exon
so has part: feature:2413936-2414022:1:exon
so has part: feature:2415326-2415445:1:exon
so has part: feature:2418254-2418403:1:exon
so has part: feature:2419139-2419284:1:exon
so has part: feature:2420330-2420424:1:exon
so has part: feature:2421351-2421525:1:exon

XP_041036051.1
type: Protein
SIO_000068: ncbiprotein

position:2411395:1
position: 2411395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2411395-2411461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2413063-2413134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2413936-2414022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2415326-2415445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2418254-2418403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2419139-2419284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2420330-2420424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2421351-2421525:1:exon

LOC121273154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 17, member A-like isoform X3
translation: MEQDTNYMNMRHIKNNTTAPSEHDLEISYAELNLLPASGTSKPHTTGEQEPSYAQVNFTPQSPQQNQVPEVTPDKDEIGKETAGGRRSKKSRCLIVVGIIVIICNFVIITGLTVHVLQMNKEHVEDDPLNRTLAIALRNLTELNGKFQKLSETAQSLCPMLRSCSESLCPSGWEDHNHHCYRFSTDTVNWDSAKQQCESLNSHLIIINTEQEQKSIENYPGDYWIGLTDRGSEGNWTWVDGTPVSFTQWYGGEPNNWNDHENCAFIRRTDWNDVSCTDQFRFICEKRALPCVEPADIEKYCS
SIO_010081: LOC121273154
subclass of: SO_0000673
so part of: LOC121273154
location: join(2411395..2411461,2413063..2413134,2413936..2414022,2415326..2415445,2418254..2418403,2419142..2419284,2420330..2420424,2421351..2421525)
location: region:2411395-2421525:1
so has part: feature:2411395-2411461:1:exon
so has part: feature:2413063-2413134:1:exon
so has part: feature:2413936-2414022:1:exon
so has part: feature:2415326-2415445:1:exon
so has part: feature:2418254-2418403:1:exon
so has part: feature:2419142-2419284:1:exon
so has part: feature:2420330-2420424:1:exon
so has part: feature:2421351-2421525:1:exon

XP_041036053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2411395-2411461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2413063-2413134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2413936-2414022:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2415326-2415445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2418254-2418403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2419142-2419284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2420330-2420424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2421351-2421525:1:exon

LOC121273150
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2441994..2496519
location: region:2441994-2496519:1
so has part: feature:2441994-2496519:1:exon
subclass of: SO_0000010

121273150
type: Gene
SIO_000068: ncbigene

position:2441994:1
position: 2441994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2496519:1
position: 2496519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2441994-2496519:1:exon

LOC121273150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273150
product: C-type lectin domain family 17, member A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180111.1
SIO_010081: LOC121273150
subclass of: SO_0000673
so part of: LOC121273150
location: join(2441994..2442051,2443298..2443417,2489914..2490033,2491978..2492120,2495210..2495316,2496345..2496519)
location: region:2441994-2496519:1
so has part: feature:2441994-2442051:1:exon
so has part: feature:2443298-2443417:1:exon
so has part: feature:2489914-2490033:1:exon
so has part: feature:2491978-2492120:1:exon
so has part: feature:2495210-2495316:1:exon
so has part: feature:2496345-2496519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2441994-2442051:1:exon

position:2442051:1
position: 2442051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2443298-2443417:1:exon

position:2443298:1
position: 2443298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2443417:1
position: 2443417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2489914-2490033:1:exon

position:2489914:1
position: 2489914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2490033:1
position: 2490033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2491978-2492120:1:exon

position:2491978:1
position: 2491978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492120:1
position: 2492120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2495210-2495316:1:exon

position:2495210:1
position: 2495210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495316:1
position: 2495316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2496345-2496519:1:exon

position:2496345:1
position: 2496345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-type lectin domain family 17, member A-like
translation: MEQDTEYMSTRQSMTVPSERQTGQEKAGGRSSITSTYLGIACLIVLIISLAIAIGLRVQVLQMDKDMTGLNGKIRNMSETLEQMLRDRRSFCTVLRNFSESLCPRGWEVHNQHCYRFSTDTVNWDSAKQQCESENSHLIIINTEQEQNFIKKSLENNPGTYWIGLTDRESEGNWKWVDGTTMSFTQWDHGEPNNWNNNENCAIIRTSEWNDYSCTDQFHFICEKSALPCVEPADIEKYCS
SIO_010081: LOC121273150
subclass of: SO_0000673
so part of: LOC121273150
location: join(2441994..2442051,2443298..2443417,2489914..2490033,2491978..2492120,2495210..2495316,2496345..2496519)
location: region:2441994-2496519:1
so has part: feature:2441994-2442051:1:exon
so has part: feature:2443298-2443417:1:exon
so has part: feature:2489914-2490033:1:exon
so has part: feature:2491978-2492120:1:exon
so has part: feature:2495210-2495316:1:exon
so has part: feature:2496345-2496519:1:exon

XP_041036045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2441994-2442051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2443298-2443417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2489914-2490033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2491978-2492120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2495210-2495316:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2496345-2496519:1:exon

LOC121273141
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2630275..2649760
location: region:2630275-2649760:1
so has part: feature:2630275-2649760:1:exon
subclass of: SO_0000011

121273141
type: Gene
SIO_000068: ncbigene

position:2630275:1
position: 2630275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2649760:1
position: 2649760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2630275-2649760:1:exon

LOC121273141
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13397
nc RNA class: lncRNA
gene: LOC121273141
product: uncharacterized LOC121273141
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005941951.1
SIO_010081: LOC121273141
subclass of: SO_0000673
so part of: LOC121273141
location: join(2630275..2630519,2644880..2644943,2649727..2649760)
location: region:2630275-2649760:1
so has part: feature:2630275-2630519:1:exon
so has part: feature:2644880-2644943:1:exon
so has part: feature:2649727-2649760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2630275-2630519:1:exon

position:2630519:1
position: 2630519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2644880-2644943:1:exon

position:2644880:1
position: 2644880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2644943:1
position: 2644943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2649727-2649760:1:exon

position:2649727:1
position: 2649727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273156
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273156
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2740812..2806984
location: region:2740812-2806984:1
so has part: feature:2740812-2806984:1:exon
subclass of: SO_0000011

121273156
type: Gene
SIO_000068: ncbigene

position:2740812:1
position: 2740812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2806984:1
position: 2806984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2740812-2806984:1:exon

LOC121273156
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13397
nc RNA class: lncRNA
gene: LOC121273156
product: uncharacterized LOC121273156
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005941952.1
SIO_010081: LOC121273156
subclass of: SO_0000673
so part of: LOC121273156
location: join(2740812..2740995,2742384..2742464,2743107..2743690,2800388..2800468,2805694..2805774,2806553..2806984)
location: region:2740812-2806984:1
so has part: feature:2740812-2740995:1:exon
so has part: feature:2742384-2742464:1:exon
so has part: feature:2743107-2743690:1:exon
so has part: feature:2800388-2800468:1:exon
so has part: feature:2805694-2805774:1:exon
so has part: feature:2806553-2806984:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2740812-2740995:1:exon

position:2740995:1
position: 2740995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2742384-2742464:1:exon

position:2742384:1
position: 2742384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2742464:1
position: 2742464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2743107-2743690:1:exon

position:2743107:1
position: 2743107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2743690:1
position: 2743690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2800388-2800468:1:exon

position:2800388:1
position: 2800388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2800468:1
position: 2800468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2805694-2805774:1:exon

position:2805694:1
position: 2805694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2805774:1
position: 2805774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2806553-2806984:1:exon

position:2806553:1
position: 2806553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273151
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3403802..3537047
location: region:3403802-3537047:1
so has part: feature:3403802-3537047:1:exon
subclass of: SO_0000010

121273151
type: Gene
SIO_000068: ncbigene

position:3403802:1
position: 3403802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3537047:1
position: 3537047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3403802-3537047:1:exon

LOC121273151
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273151
product: tumor necrosis factor receptor superfamily member 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180112.1
SIO_010081: LOC121273151
subclass of: SO_0000673
so part of: LOC121273151
location: join(3403802..3403942,3534171..3534273,3535388..3535513,3535843..3535992,3536971..3537047)
location: region:3403802-3537047:1
so has part: feature:3403802-3403942:1:exon
so has part: feature:3534171-3534273:1:exon
so has part: feature:3535388-3535513:1:exon
so has part: feature:3535843-3535992:1:exon
so has part: feature:3536971-3537047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3403802-3403942:1:exon

position:3403942:1
position: 3403942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3534171-3534273:1:exon

position:3534171:1
position: 3534171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3534273:1
position: 3534273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3535388-3535513:1:exon

position:3535388:1
position: 3535388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3535513:1
position: 3535513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3535843-3535992:1:exon

position:3535843:1
position: 3535843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3535992:1
position: 3535992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3536971-3537047:1:exon

position:3536971:1
position: 3536971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273151
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273151
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 3-like
translation: MLLSIACMVGLSLSSSNSYAPLGGRCDQENDYYEGHLHICCSKCPPGQYALQRCTRQSDTLCAVCREGEFTEFWNYVRECQICPSCDHRRGLVVRQNCTSQHKTECECAQGHHCVEGQRCSECERHTECPPGQEEAQQGLAADERLSLGLTLGLRITSVGRGR
SIO_010081: LOC121273151
subclass of: SO_0000673
so part of: LOC121273151
location: join(3403907..3403942,3534171..3534273,3535388..3535513,3535843..3535992,3536971..3537047)
location: region:3403907-3537047:1
so has part: feature:3403907-3403942:1:exon
so has part: feature:3534171-3534273:1:exon
so has part: feature:3535388-3535513:1:exon
so has part: feature:3535843-3535992:1:exon
so has part: feature:3536971-3537047:1:exon

XP_041036046.1
type: Protein
SIO_000068: ncbiprotein

position:3403907:1
position: 3403907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3403907-3403942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3534171-3534273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3535388-3535513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3535843-3535992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3536971-3537047:1:exon

LOC121273140
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3574557..3579951
location: region:3574557-3579951:1
so has part: feature:3574557-3579951:1:exon
subclass of: SO_0000011

121273140
type: Gene
SIO_000068: ncbigene

position:3574557:1
position: 3574557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3579951:1
position: 3579951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3574557-3579951:1:exon

LOC121273140
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13397
nc RNA class: lncRNA
gene: LOC121273140
product: uncharacterized LOC121273140
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005941950.1
SIO_010081: LOC121273140
subclass of: SO_0000673
so part of: LOC121273140
location: join(3574557..3574659,3577360..3577485,3577815..3577964,3579894..3579951)
location: region:3574557-3579951:1
so has part: feature:3574557-3574659:1:exon
so has part: feature:3577360-3577485:1:exon
so has part: feature:3577815-3577964:1:exon
so has part: feature:3579894-3579951:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3574557-3574659:1:exon

position:3574659:1
position: 3574659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3577360-3577485:1:exon

position:3577360:1
position: 3577360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3577485:1
position: 3577485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3577815-3577964:1:exon

position:3577815:1
position: 3577815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3577964:1
position: 3577964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3579894-3579951:1:exon

position:3579894:1
position: 3579894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273152
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3638611..>3692553
location: region:3638611-3692553:1
so has part: feature:3638611-3692553:1:exon
subclass of: SO_0000010

121273152
type: Gene
SIO_000068: ncbigene

position:3638611:1
position: 3638611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3692553:1
position: 3692553
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3638611-3692553:1:exon

LOC121273152
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273152
product: tumor necrosis factor receptor superfamily member 1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180113.1
SIO_010081: LOC121273152
subclass of: SO_0000673
so part of: LOC121273152
location: join(3638611..3638778,3660523..3660621,3679043..3679205,3679788..3679916,3684662..3684805,3684936..3685020,3689834..3689880,3690155..3690283,3692478..>3692553)
location: region:3638611-3692553:1
so has part: feature:3638611-3638778:1:exon
so has part: feature:3660523-3660621:1:exon
so has part: feature:3679043-3679205:1:exon
so has part: feature:3679788-3679916:1:exon
so has part: feature:3684662-3684805:1:exon
so has part: feature:3684936-3685020:1:exon
so has part: feature:3689834-3689880:1:exon
so has part: feature:3690155-3690283:1:exon
so has part: feature:3692478-3692553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3638611-3638778:1:exon

position:3638778:1
position: 3638778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3660523-3660621:1:exon

position:3660523:1
position: 3660523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3660621:1
position: 3660621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3679043-3679205:1:exon

position:3679043:1
position: 3679043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3679205:1
position: 3679205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3679788-3679916:1:exon

position:3679788:1
position: 3679788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3679916:1
position: 3679916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3684662-3684805:1:exon

position:3684662:1
position: 3684662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3684805:1
position: 3684805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3684936-3685020:1:exon

position:3684936:1
position: 3684936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3685020:1
position: 3685020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3689834-3689880:1:exon

position:3689834:1
position: 3689834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3689880:1
position: 3689880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3690155-3690283:1:exon

position:3690155:1
position: 3690155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3690283:1
position: 3690283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3692478-3692553:1:exon

position:3692478:1
position: 3692478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273152
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273152
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 1A-like
translation: MPPQGEQPVGAGGGGAGWGKAAVVVKVHVPQESPEAPQGNDSGASKPYSNRCDHNRIVDALLSTSPNSLDSGRVPLTWKIANLTRLFKTCCNVDIGEPTSGGQATLTGSSSINQLDRGRRGISCASDEYKPSWKDYCCNKCTEGFYRTADCTGPGTRTNCSSCPPETFTQYANHLKKCKSCLQCDPVFNQVEVRKCESTRDRVCGCPKGMFQKKIETLTFYCQNCSSCKIVLRECSGYNDTICHCDHGQYYNTQTKECQTCDSCNQGLTCISMCSQTSAPVNHHIFILAVFSSSVLFVVVVGLMAYAMKNKWKKLSGLQSLTETGTGVQSEVSESENLKKPVWDIS
SIO_010081: LOC121273152
subclass of: SO_0000673
so part of: LOC121273152
location: join(3638611..3638778,3660523..3660621,3679043..3679205,3679788..3679916,3684662..3684805,3684936..3685020,3689834..3689880,3690155..3690283,3692478..>3692553)
location: region:3638611-3692553:1
so has part: feature:3638611-3638778:1:exon
so has part: feature:3660523-3660621:1:exon
so has part: feature:3679043-3679205:1:exon
so has part: feature:3679788-3679916:1:exon
so has part: feature:3684662-3684805:1:exon
so has part: feature:3684936-3685020:1:exon
so has part: feature:3689834-3689880:1:exon
so has part: feature:3690155-3690283:1:exon
so has part: feature:3692478-3692553:1:exon

XP_041036047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3638611-3638778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3660523-3660621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3679043-3679205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3679788-3679916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3684662-3684805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3684936-3685020:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3689834-3689880:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3690155-3690283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3692478-3692553:1:exon