Carcharodon carcharias isolate sCarCar2 chromosome 38, sCarCar2.pri, whole genome shotgun sequence.
type: Entry
definition: Carcharodon carcharias isolate sCarCar2 chromosome 38, sCarCar2.pri, whole genome shotgun sequence.
sequence version: NC_054504.1
sequence date: 2021-05-03
sequence: sequence
division: CON
label: NC_054504.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA725502
dblink: SAMN12629504
keyword: WGS
keyword: RefSeq
source: Carcharodon carcharias (great white shark)
organism: Carcharodon carcharias
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Lamniformes; Alopiidae; Carcharodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030002.1.\nAssembly name: sCarCar2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/30. The original whole-genome shotgun project has the\naccession JAGDEE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 05-FEB-2021\nAssembly Method :: FALCON v. DX 2.0.1; FALCON-Unzip v. DX\n 1.2.1; purge_dups v. DX 19-08-10;\n scaff10X v. DX 2.0.3; bionano Solve v. DX\n 3.4.0; Salsa2 HiC v. DX 2.2.0; Arrow\n polishing and gap filling v. DX 7.0.1.1;\n Longranger Align DX v. 2.2.2.1; freebayes\n DX v. 19-07-11; gEVAL manual curation v.\n 2021-02-05; VGP assembly pipeline v. 1.6\nAssembly Name :: sCarCar2.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 66.84x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Carcharodon carcharias Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2983599
topology: linear
so has quality: SO_0000987
location: 1..2983599
location: region:1-2983599:1
RO_0002162: 13397

NC_054504
type: RefSeq
SIO_000068: refseq

PRJNA725502
type: BioProject
SIO_000068: bioproject

SAMN12629504
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2983599:1
position: 2983599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2983599:1:source
so part of: sequence
organism: Carcharodon carcharias
mol type: genomic DNA
isolate: sCarCar2
chromosome: 38
sex: male
tissue type: blood
dev stage: juvenile
country: USA
lat lon: 33.782158 N 118.12249 W
collection date: 2019-01-30
collected by: Chris Lowe, Kady Lyons

13397
type: Taxonomy
SIO_000068: taxonomy

LOC121273051
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 184000..187631
location: region:184000-187631:1
so has part: feature:184000-187631:1:exon
subclass of: SO_0000010

121273051
type: Gene
SIO_000068: ncbigene

position:184000:1
position: 184000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187631:1
position: 187631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184000-187631:1:exon

LOC121273051
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273051
product: probable G-protein coupled receptor 139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_041180002.1
SIO_010081: LOC121273051
subclass of: SO_0000673
so part of: LOC121273051
location: join(184000..184009,186730..187631)
location: region:184000-187631:1
so has part: feature:184000-184009:1:exon
so has part: feature:186730-187631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184000-184009:1:exon

position:184009:1
position: 184009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:186730-187631:1:exon

position:186730:1
position: 186730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273051
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 139
translation: MSRDNSVTIVILSRGKCGLSNCVTRYLVAMAASDLLVTILDLILRQIPIVFEEEFVFLESIPVCNIHAVLLYAVTDCSVWFTVAFTFDRFMAICCRKLKSKHCTERTAAVVLGTVTALSGLKNIFWYFMLTGSYVLVNQPWFCLIALYADFSPVWTAIEFLHQILTPCVPFVLILLLNVLTVRHILVNSRVRRRLRAPSSGENTRDPEMESRRKSIILLFVISGNFILLWSTLMVYSIWIRMSWMGHQSVYLPYFMLELGFMLQLLFCCTNTCIYAVTQSKFRKQVKVMLKHPFAPILQFLRK
SIO_010081: LOC121273051
subclass of: SO_0000673
so part of: LOC121273051
location: join(184000..184009,186730..187631)
location: region:184000-187631:1
so has part: feature:184000-184009:1:exon
so has part: feature:186730-187631:1:exon

XP_041035936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184000-184009:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186730-187631:1:exon

LOC121273052
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 377623..406525
location: region:377623-406525:1
so has part: feature:377623-406525:1:exon
subclass of: SO_0000010

121273052
type: Gene
SIO_000068: ncbigene

position:377623:1
position: 377623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406525:1
position: 406525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377623-406525:1:exon

LOC121273052
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273052
product: carbonic anhydrase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180003.1
SIO_010081: LOC121273052
subclass of: SO_0000673
so part of: LOC121273052
location: join(377623..377717,379966..379995,382762..382929,388058..388206,396899..396988,401585..401657,404263..404427,406323..406525)
location: region:377623-406525:1
so has part: feature:377623-377717:1:exon
so has part: feature:379966-379995:1:exon
so has part: feature:382762-382929:1:exon
so has part: feature:388058-388206:1:exon
so has part: feature:396899-396988:1:exon
so has part: feature:401585-401657:1:exon
so has part: feature:404263-404427:1:exon
so has part: feature:406323-406525:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377623-377717:1:exon

position:377717:1
position: 377717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:379966-379995:1:exon

position:379966:1
position: 379966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379995:1
position: 379995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:382762-382929:1:exon

position:382762:1
position: 382762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382929:1
position: 382929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:388058-388206:1:exon

position:388058:1
position: 388058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388206:1
position: 388206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:396899-396988:1:exon

position:396899:1
position: 396899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396988:1
position: 396988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:401585-401657:1:exon

position:401585:1
position: 401585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401657:1
position: 401657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:404263-404427:1:exon

position:404263:1
position: 404263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404427:1
position: 404427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:406323-406525:1:exon

position:406323:1
position: 406323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273052
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 4-like
translation: METAMLFVLLGLGLSQVESATDGFCYYQTSCGPTSWPVTYPTCQGTEQSPINIQKNRTIRDEHLGEFKFHQYDNRQFLTQIKHTKMSVKVRVKPGMELSGGGLRAVYLVSQFHLHWGQNISAQGSEHMLDGKRASMELHIVHRQKNLTLEEAFKHRQGLAVLAFFIEIESGIAEDPAWRNLTRTIKYLKEDGDHYDLNETVSLMDLINTVNLTKYYRYNGSLTTPECNEVVVWTVFEETHPPECITVEREPSVVLARRLKRSGYRAHARPPGGAHTGVTPPAAADGYHLGQRQARASLPSSTCSPRRPLPRPV
SIO_010081: LOC121273052
subclass of: SO_0000673
so part of: LOC121273052
location: join(377654..377717,379966..379995,382762..382929,388058..388206,396899..396988,401585..401657,404263..404427,406323..406525)
location: region:377654-406525:1
so has part: feature:377654-377717:1:exon
so has part: feature:379966-379995:1:exon
so has part: feature:382762-382929:1:exon
so has part: feature:388058-388206:1:exon
so has part: feature:396899-396988:1:exon
so has part: feature:401585-401657:1:exon
so has part: feature:404263-404427:1:exon
so has part: feature:406323-406525:1:exon

XP_041035937.1
type: Protein
SIO_000068: ncbiprotein

position:377654:1
position: 377654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377654-377717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379966-379995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382762-382929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388058-388206:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396899-396988:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:401585-401657:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:404263-404427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406323-406525:1:exon

LOC121273053
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 409476..436654
location: region:409476-436654:1
so has part: feature:409476-436654:1:exon
subclass of: SO_0000010

121273053
type: Gene
SIO_000068: ncbigene

position:409476:1
position: 409476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436654:1
position: 436654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409476-436654:1:exon

LOC121273053
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273053
product: carbonic anhydrase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180004.1
SIO_010081: LOC121273053
subclass of: SO_0000673
so part of: LOC121273053
location: join(409476..409527,411741..411770,414590..414757,419886..420034,427393..427482,431690..431762,434371..434534,436373..436654)
location: region:409476-436654:1
so has part: feature:409476-409527:1:exon
so has part: feature:411741-411770:1:exon
so has part: feature:414590-414757:1:exon
so has part: feature:419886-420034:1:exon
so has part: feature:427393-427482:1:exon
so has part: feature:431690-431762:1:exon
so has part: feature:434371-434534:1:exon
so has part: feature:436373-436654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409476-409527:1:exon

position:409527:1
position: 409527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:411741-411770:1:exon

position:411741:1
position: 411741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411770:1
position: 411770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:414590-414757:1:exon

position:414590:1
position: 414590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414757:1
position: 414757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:419886-420034:1:exon

position:419886:1
position: 419886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420034:1
position: 420034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427393-427482:1:exon

position:427393:1
position: 427393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427482:1
position: 427482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431690-431762:1:exon

position:431690:1
position: 431690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431762:1
position: 431762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:434371-434534:1:exon

position:434371:1
position: 434371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434534:1
position: 434534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:436373-436654:1:exon

position:436373:1
position: 436373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 4-like
translation: MLFVLLGLGLSQVESATDGFCYYQTSCGPTSWPVTYPTCQGTEQSPINIQKNRTIRDEHLGEFKFHQYDNRQFLTQIKHTKMSVKVRVKPGMELSGGGLRAVYLVSQFHLHWGQNISAQGSEHMLDGKRASMELHIVHRQTNLTLEEAFKHRQGLAVLAFFIEIESGIAEDPAWRNLTRTIKYLKEDGDHYDLNETVSLMDLINTVNHTKYYRYNGSLTTPECNEVVVWTVFEEPIHLNASLVECFFEYLHVNHAGGDKLVNNFRPVQSNGNPVLSSPAASRGADIGPTRSPAGGTHGGDSTPQQLMVTTSGSARRGPLFLVLLLPLAGLFLRPV
SIO_010081: LOC121273053
subclass of: SO_0000673
so part of: LOC121273053
location: join(409476..409527,411741..411770,414590..414757,419886..420034,427393..427482,431690..431762,434371..434534,436373..436654)
location: region:409476-436654:1
so has part: feature:409476-409527:1:exon
so has part: feature:411741-411770:1:exon
so has part: feature:414590-414757:1:exon
so has part: feature:419886-420034:1:exon
so has part: feature:427393-427482:1:exon
so has part: feature:431690-431762:1:exon
so has part: feature:434371-434534:1:exon
so has part: feature:436373-436654:1:exon

XP_041035938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409476-409527:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:411741-411770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414590-414757:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419886-420034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427393-427482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431690-431762:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434371-434534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436373-436654:1:exon

rnf25
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: rnf25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(444848..459033)
location: region:444848-459033:-1
so has part: feature:444848-459033:-1:exon
subclass of: SO_0000010

121273054
type: Gene
SIO_000068: ncbigene

position:444848:-1
position: 444848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459033:-1
position: 459033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444848-459033:-1:exon

rnf25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: rnf25
product: ring finger protein 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 77% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180006.1
SIO_010081: rnf25
subclass of: SO_0000673
so part of: rnf25
location: complement(join(444848..445228,446848..446982,448933..449022,450443..450583,450699..450770,451905..451974,453703..453770,455377..455479,455642..455716,458916..459033))
location: region:444848-459033:-1
so has part: feature:458916-459033:-1:exon
so has part: feature:455642-455716:-1:exon
so has part: feature:455377-455479:-1:exon
so has part: feature:453703-453770:-1:exon
so has part: feature:451905-451974:-1:exon
so has part: feature:450699-450770:-1:exon
so has part: feature:450443-450583:-1:exon
so has part: feature:448933-449022:-1:exon
so has part: feature:446848-446982:-1:exon
so has part: feature:444848-445228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458916-459033:-1:exon

position:458916:-1
position: 458916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:455642-455716:-1:exon

position:455642:-1
position: 455642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455716:-1
position: 455716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:455377-455479:-1:exon

position:455377:-1
position: 455377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455479:-1
position: 455479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:453703-453770:-1:exon

position:453703:-1
position: 453703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453770:-1
position: 453770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:451905-451974:-1:exon

position:451905:-1
position: 451905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451974:-1
position: 451974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:450699-450770:-1:exon

position:450699:-1
position: 450699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450770:-1
position: 450770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:450443-450583:-1:exon

position:450443:-1
position: 450443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450583:-1
position: 450583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:448933-449022:-1:exon

position:448933:-1
position: 448933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449022:-1
position: 449022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:446848-446982:-1:exon

position:446848:-1
position: 446848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446982:-1
position: 446982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:444848-445228:-1:exon

position:445228:-1
position: 445228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rnf25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: rnf25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF25
translation: MAAGEEESPVCSEIEVLQSIYLDEISVSQDSSRLHPWEIRITLHPATADDAESQYVRFTLILSLTAQYPDVAPVVSIRNPRGLSDDRIQSIYQTLTELAEESTGGQVLYQLIEKGKEILTNNNIPHCQCVICLDFFQESEFFTKTSCYHYFHSYCLARYIRHSEAELQAQRQQQQTPKHPEQDTEQDVLCPVCREPLTYDLGLLLSAAAPCRALEPYRPDQESLRKRVELQTIFQRQLERGGIIDPEAEQNRFFISLTRPVRSQTTEDDPGQQTESPGSSPAPSPSPAPHPHPHPHPHRGWPARRPARRGRPEWASPRGDPRFAEGRSRDPRPRGRGLAAGGGGWEFGGRPRGTGRGRGQGQGRTGRGHPGGQGTGDPVQRRLVD
SIO_010081: rnf25
subclass of: SO_0000673
so part of: rnf25
location: complement(join(444848..445228,446848..446982,448933..449022,450443..450583,450699..450770,451905..451974,453703..453770,455377..455479,455642..455716,458916..458938))
location: region:444848-458938:-1
so has part: feature:458916-458938:-1:exon
so has part: feature:455642-455716:-1:exon
so has part: feature:455377-455479:-1:exon
so has part: feature:453703-453770:-1:exon
so has part: feature:451905-451974:-1:exon
so has part: feature:450699-450770:-1:exon
so has part: feature:450443-450583:-1:exon
so has part: feature:448933-449022:-1:exon
so has part: feature:446848-446982:-1:exon
so has part: feature:444848-445228:-1:exon

XP_041035940.1
type: Protein
SIO_000068: ncbiprotein

position:458938:-1
position: 458938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458916-458938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:455642-455716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455377-455479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:453703-453770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451905-451974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450699-450770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450443-450583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448933-449022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446848-446982:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444848-445228:-1:exon

LOC121273055
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 459618..491989
location: region:459618-491989:1
so has part: feature:459618-491989:1:exon
subclass of: SO_0000010

121273055
type: Gene
SIO_000068: ncbigene

position:459618:1
position: 459618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491989:1
position: 491989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459618-491989:1:exon

LOC121273055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273055
product: serine/threonine-protein kinase 36-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180007.1
SIO_010081: LOC121273055
subclass of: SO_0000673
so part of: LOC121273055
location: join(459618..460991,462896..463036,464411..464511,491968..491989)
location: region:459618-491989:1
so has part: feature:459618-460991:1:exon
so has part: feature:462896-463036:1:exon
so has part: feature:464411-464511:1:exon
so has part: feature:491968-491989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:459618-460991:1:exon

position:460991:1
position: 460991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:462896-463036:1:exon

position:462896:1
position: 462896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463036:1
position: 463036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464411-464511:1:exon

position:464411:1
position: 464411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464511:1
position: 464511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:491968-491989:1:exon

position:491968:1
position: 491968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 36-like
translation: MMNYHVLDMIGEGSFGRVYKGRKRFSGQVVALKFIPKTGRSEKELTNLRREIEIMRGLQHPNIVQMLDSLETDKEVVVVTEFAEGELFQILEDDGSLPEEQVLYISLPPAKGQCI
SIO_010081: LOC121273055
subclass of: SO_0000673
so part of: LOC121273055
location: join(460908..460991,462896..463036,464411..464511,491968..491989)
location: region:460908-491989:1
so has part: feature:460908-460991:1:exon
so has part: feature:462896-463036:1:exon
so has part: feature:464411-464511:1:exon
so has part: feature:491968-491989:1:exon

XP_041035941.1
type: Protein
SIO_000068: ncbiprotein

position:460908:1
position: 460908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460908-460991:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462896-463036:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464411-464511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491968-491989:1:exon

LOC121273056
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(491957..504665)
location: region:491957-504665:-1
so has part: feature:491957-504665:-1:exon
subclass of: SO_0000010

121273056
type: Gene
SIO_000068: ncbigene

position:491957:-1
position: 491957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504665:-1
position: 504665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491957-504665:-1:exon

LOC121273056
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273056
product: BICD family-like cargo adapter 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180008.1
SIO_010081: LOC121273056
subclass of: SO_0000673
so part of: LOC121273056
location: complement(join(491957..492302,492684..492830,496487..496603,500204..500410,504324..504464,504528..504665))
location: region:491957-504665:-1
so has part: feature:504528-504665:-1:exon
so has part: feature:504324-504464:-1:exon
so has part: feature:500204-500410:-1:exon
so has part: feature:496487-496603:-1:exon
so has part: feature:492684-492830:-1:exon
so has part: feature:491957-492302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504528-504665:-1:exon

position:504528:-1
position: 504528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:504324-504464:-1:exon

position:504324:-1
position: 504324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504464:-1
position: 504464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:500204-500410:-1:exon

position:500204:-1
position: 500204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500410:-1
position: 500410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:496487-496603:-1:exon

position:496487:-1
position: 496487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496603:-1
position: 496603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:492684-492830:-1:exon

position:492684:-1
position: 492684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492830:-1
position: 492830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:491957-492302:-1:exon

position:492302:-1
position: 492302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BICD family-like cargo adapter 1
translation: MEGGGGEAGARWGRGKTGAPSPGLEEMFFPFMLRRRDPYTTEAGAPSELPQALWQREQDLQLAAGLGKALLERNEELAKQKEAGEFECAQQLERLEQEKHDQRRRFEARQSELEARLAELESELLHLSGQRERERRDADRTKGRVTQELAQHNERLLEELSKAETEQHRLRSALQAVEVDLRASSLDHTERFNQLRALKAENQMLVEKGWRAEERIKSLREEKEILQSGIETLQGSMKLLQEHSKEQESLLLQLRSEMEQVRTANQELRERVHEMKEEMSLQDLGELNNSLHSEIQQIESSPGLEALAEVGKITPSGTGCHSALDTLSLPPLGPGVTVR
SIO_010081: LOC121273056
subclass of: SO_0000673
so part of: LOC121273056
location: complement(join(492033..492302,492684..492830,496487..496603,500204..500410,504324..504464,504528..504665))
location: region:492033-504665:-1
so has part: feature:504528-504665:-1:exon
so has part: feature:504324-504464:-1:exon
so has part: feature:500204-500410:-1:exon
so has part: feature:496487-496603:-1:exon
so has part: feature:492684-492830:-1:exon
so has part: feature:492033-492302:-1:exon

XP_041035942.1
type: Protein
SIO_000068: ncbiprotein

position:492033:-1
position: 492033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504528-504665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:504324-504464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500204-500410:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496487-496603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492684-492830:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492033-492302:-1:exon

LOC121273045
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 530856..538174
location: region:530856-538174:1
so has part: feature:530856-538174:1:exon
subclass of: SO_0000011

121273045
type: Gene
SIO_000068: ncbigene

position:530856:1
position: 530856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538174:1
position: 538174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530856-538174:1:exon

LOC121273045
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13397
nc RNA class: lncRNA
gene: LOC121273045
product: uncharacterized LOC121273045
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005941944.1
SIO_010081: LOC121273045
subclass of: SO_0000673
so part of: LOC121273045
location: join(530856..531030,534125..534255,537901..538174)
location: region:530856-538174:1
so has part: feature:530856-531030:1:exon
so has part: feature:534125-534255:1:exon
so has part: feature:537901-538174:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:530856-531030:1:exon

position:531030:1
position: 531030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534125-534255:1:exon

position:534125:1
position: 534125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534255:1
position: 534255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537901-538174:1:exon

position:537901:1
position: 537901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273057
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 578982..628533
location: region:578982-628533:1
so has part: feature:578982-628533:1:exon
subclass of: SO_0000010

121273057
type: Gene
SIO_000068: ncbigene

position:578982:1
position: 578982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628533:1
position: 628533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578982-628533:1:exon

LOC121273057
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273057
product: serine/threonine-protein kinase 36-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041180009.1
SIO_010081: LOC121273057
subclass of: SO_0000673
so part of: LOC121273057
location: join(578982..579237,586111..586222,592080..592223,593587..593766,594856..594953,597069..597165,599160..599295,603380..603507,604311..604418,605597..605689,606280..606374,607089..607152,609837..609947,612390..612464,612962..613133,614839..614986,615341..615503,617695..618492,628234..628533)
location: region:578982-628533:1
so has part: feature:578982-579237:1:exon
so has part: feature:586111-586222:1:exon
so has part: feature:592080-592223:1:exon
so has part: feature:593587-593766:1:exon
so has part: feature:594856-594953:1:exon
so has part: feature:597069-597165:1:exon
so has part: feature:599160-599295:1:exon
so has part: feature:603380-603507:1:exon
so has part: feature:604311-604418:1:exon
so has part: feature:605597-605689:1:exon
so has part: feature:606280-606374:1:exon
so has part: feature:607089-607152:1:exon
so has part: feature:609837-609947:1:exon
so has part: feature:612390-612464:1:exon
so has part: feature:612962-613133:1:exon
so has part: feature:614839-614986:1:exon
so has part: feature:615341-615503:1:exon
so has part: feature:617695-618492:1:exon
so has part: feature:628234-628533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578982-579237:1:exon

position:579237:1
position: 579237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586111-586222:1:exon

position:586111:1
position: 586111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586222:1
position: 586222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:592080-592223:1:exon

position:592080:1
position: 592080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592223:1
position: 592223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:593587-593766:1:exon

position:593587:1
position: 593587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593766:1
position: 593766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:594856-594953:1:exon

position:594856:1
position: 594856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594953:1
position: 594953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:597069-597165:1:exon

position:597069:1
position: 597069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597165:1
position: 597165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:599160-599295:1:exon

position:599160:1
position: 599160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599295:1
position: 599295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:603380-603507:1:exon

position:603380:1
position: 603380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603507:1
position: 603507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:604311-604418:1:exon

position:604311:1
position: 604311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604418:1
position: 604418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:605597-605689:1:exon

position:605597:1
position: 605597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605689:1
position: 605689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:606280-606374:1:exon

position:606280:1
position: 606280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606374:1
position: 606374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:607089-607152:1:exon

position:607089:1
position: 607089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607152:1
position: 607152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:609837-609947:1:exon

position:609837:1
position: 609837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609947:1
position: 609947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:612390-612464:1:exon

position:612390:1
position: 612390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612464:1
position: 612464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:612962-613133:1:exon

position:612962:1
position: 612962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613133:1
position: 613133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:614839-614986:1:exon

position:614839:1
position: 614839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614986:1
position: 614986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:615341-615503:1:exon

position:615341:1
position: 615341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615503:1
position: 615503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:617695-618492:1:exon

position:617695:1
position: 617695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618492:1
position: 618492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:628234-628533:1:exon

position:628234:1
position: 628234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273057
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 36-like
translation: METPPECVTARGPLTPGLHQISRDYEQEFPEVHVGARAVKRTTHNMENVDLENEELDSDEEWEQLIEATDPSALQLSTPLTLLRDQAFRERVCARLRDSSSQVLEGMLEGASRLRPALRVIGNLLATRCHWDLLHSFCQRLELPEFLLQLAGQMLHTERIRQQPWCVTVLSDLLAVLAAYFSSDFEVEPSGAGSGIKVLEQSAIQFLQLLEQLLAQAEMGLREQSIMCLIFICETVDQSSPAVSTPFYTHLLTTHRPVLAAVLRGTHSGRTEGPAGDRQATRERWDRLLGMHTAALAATCTVSPGATVCRQAKHQIAQYISDTLFTAESTSKRTRFIKGIQQPTLCLNTLKVLYSCCQVSKATCQLLVDEALNTLLLLLQCKLSPDDTILSQTVELTLYLLTILVIQLDHVPEPLEHSVGFITSILLQSHTPAHTCAAALLIIQLSSRGSPVEIRNEDTLQTFHMALLSSVQLTVLPPLDLGAFDGLLTLLVQLLNEGEPAALADFADSELWNTAWHHLARVLRLTGDRPVMEGETPRPGQPSPIPDWNTISPSGILAFLGLATLVFTAVPYQCLPLLASPTSVVTTTLRQLLSDGFLDHLAQRLEPSAEAWVDSAHDVVLRVCQLLCFPFAMDVEEPMFSDILLALLEGEFVRHLVQVILHRLPVPSAEIALSLLCRLVLSGDAFVEQFVSSWPPSSRYLASLLQCGQTAAASACLSELLSLLAQVGRSPAGRALPFLREALASGEEAGAEAGEGRALLRALQHPDAAVRRKACGLAGRLLGEAGGEGGRRPLLDQVLARLRDPDPGVREAASLASGNAAYRAGPGPGPGPGSAQALAAALPALVGLLSDARPRTRRHAAWALHNLAHGGGAAAAAAGLGRSLLRAAAPQRLLELACRDGRAGVKEAALAALRALARWPQVREVLISMKSCEKLSVVCQHTKQRAAFSGSAGLVSPRSSAQSVLHHCNRLLEILTPTHSA
SIO_010081: LOC121273057
subclass of: SO_0000673
so part of: LOC121273057
location: join(579188..579237,586111..586222,592080..592223,593587..593766,594856..594953,597069..597165,599160..599295,603380..603507,604311..604418,605597..605689,606280..606374,607089..607152,609837..609947,612390..612464,612962..613133,614839..614986,615341..615503,617695..618492,628234..628407)
location: region:579188-628407:1
so has part: feature:579188-579237:1:exon
so has part: feature:586111-586222:1:exon
so has part: feature:592080-592223:1:exon
so has part: feature:593587-593766:1:exon
so has part: feature:594856-594953:1:exon
so has part: feature:597069-597165:1:exon
so has part: feature:599160-599295:1:exon
so has part: feature:603380-603507:1:exon
so has part: feature:604311-604418:1:exon
so has part: feature:605597-605689:1:exon
so has part: feature:606280-606374:1:exon
so has part: feature:607089-607152:1:exon
so has part: feature:609837-609947:1:exon
so has part: feature:612390-612464:1:exon
so has part: feature:612962-613133:1:exon
so has part: feature:614839-614986:1:exon
so has part: feature:615341-615503:1:exon
so has part: feature:617695-618492:1:exon
so has part: feature:628234-628407:1:exon

XP_041035943.1
type: Protein
SIO_000068: ncbiprotein

position:579188:1
position: 579188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628407:1
position: 628407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579188-579237:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586111-586222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592080-592223:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593587-593766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594856-594953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597069-597165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599160-599295:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:603380-603507:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604311-604418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:605597-605689:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606280-606374:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:607089-607152:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:609837-609947:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:612390-612464:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:612962-613133:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:614839-614986:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615341-615503:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:617695-618492:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:628234-628407:1:exon

LOC121273077
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(635453..701225)
location: region:635453-701225:-1
so has part: feature:635453-701225:-1:exon
subclass of: SO_0000010

121273077
type: Gene
SIO_000068: ncbigene

position:635453:-1
position: 635453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701225:-1
position: 701225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635453-701225:-1:exon

LOC121273077
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273077
product: mitochondrial RNA pseudouridine synthase RPUSD4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180037.1
SIO_010081: LOC121273077
subclass of: SO_0000673
so part of: LOC121273077
location: complement(join(635453..635896,637665..637762,638107..638257,639376..639469,697273..697471,697576..697747,701006..701225))
location: region:635453-701225:-1
so has part: feature:701006-701225:-1:exon
so has part: feature:697576-697747:-1:exon
so has part: feature:697273-697471:-1:exon
so has part: feature:639376-639469:-1:exon
so has part: feature:638107-638257:-1:exon
so has part: feature:637665-637762:-1:exon
so has part: feature:635453-635896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:701006-701225:-1:exon

position:701006:-1
position: 701006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:697576-697747:-1:exon

position:697576:-1
position: 697576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697747:-1
position: 697747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:697273-697471:-1:exon

position:697273:-1
position: 697273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697471:-1
position: 697471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:639376-639469:-1:exon

position:639376:-1
position: 639376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639469:-1
position: 639469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:638107-638257:-1:exon

position:638107:-1
position: 638107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638257:-1
position: 638257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:637665-637762:-1:exon

position:637665:-1
position: 637665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637762:-1
position: 637762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635453-635896:-1:exon

position:635896:-1
position: 635896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273077
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273077
product: mitochondrial RNA pseudouridine synthase RPUSD4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180036.1
SIO_010081: LOC121273077
subclass of: SO_0000673
so part of: LOC121273077
location: complement(join(635459..635896,637665..637762,638107..638257,639376..639469,697273..697474,697576..697747,701006..701225))
location: region:635459-701225:-1
so has part: feature:701006-701225:-1:exon
so has part: feature:697576-697747:-1:exon
so has part: feature:697273-697474:-1:exon
so has part: feature:639376-639469:-1:exon
so has part: feature:638107-638257:-1:exon
so has part: feature:637665-637762:-1:exon
so has part: feature:635459-635896:-1:exon

position:635459:-1
position: 635459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701006-701225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:697576-697747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:697273-697474:-1:exon

position:697474:-1
position: 697474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:639376-639469:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638107-638257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637665-637762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635459-635896:-1:exon

LOC121273077
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial RNA pseudouridine synthase RPUSD4-like isoform X2
translation: MAVTGRCWCPAAGSVSGFLCHLGTSWARGASGPGRWRLFSASELRQAAEPQSRAGTGGKQEVAAQSPLSRRVQEYRRLSRGLQRVHPNVLAKVLRKGVLFHNEELVAVDKPYGVPMQAPGTGTSVRGVLPILPKMLYGMKAQPLHLCHWLDKDASGVMILAREEGSAEALRHHFRSHRVTKKYWVITVGIPVPSEGVIDIPIIEREVSSPRKHFKMALAPLYRVGDVEGTMLRVRQNRAASSAVTRYRVLGSSGCTALVELQPITGMKHQARVHLALGLGCPILGDHKYSKWNSLEPQKLPEGVLRRLGLTQPKSRHLPLHLHGREVSIPGSTGEEEGREEEGEPMLTVTCRPPRYFLHTLKKLRILWPETERLTRGQGPSDPGRRPCDLRRQALGWGKKRGLLLQDGKASAGGEGRGGEGSQSQGAEDDDTAPNLRV
SIO_010081: LOC121273077
subclass of: SO_0000673
so part of: LOC121273077
location: complement(join(635474..635896,637665..637762,638107..638257,639376..639469,697273..697471,697576..697747,701006..701185))
location: region:635474-701185:-1
so has part: feature:701006-701185:-1:exon
so has part: feature:697576-697747:-1:exon
so has part: feature:697273-697471:-1:exon
so has part: feature:639376-639469:-1:exon
so has part: feature:638107-638257:-1:exon
so has part: feature:637665-637762:-1:exon
so has part: feature:635474-635896:-1:exon

XP_041035971.1
type: Protein
SIO_000068: ncbiprotein

position:635474:-1
position: 635474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701185:-1
position: 701185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701006-701185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:697576-697747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:697273-697471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639376-639469:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638107-638257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637665-637762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635474-635896:-1:exon

LOC121273077
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial RNA pseudouridine synthase RPUSD4-like isoform X1
translation: MAVTGRCWCPAAGSVSGFLCHLGTSWARGASGPGRWRLFSASELRQAAEPQSRAGTGGKQEVAAQSPLSRRVQEYRRLSRGLQRVHPNVLAKVLRKGVLFHNEELVAVDKPYGVPMQAAPGTGTSVRGVLPILPKMLYGMKAQPLHLCHWLDKDASGVMILAREEGSAEALRHHFRSHRVTKKYWVITVGIPVPSEGVIDIPIIEREVSSPRKHFKMALAPLYRVGDVEGTMLRVRQNRAASSAVTRYRVLGSSGCTALVELQPITGMKHQARVHLALGLGCPILGDHKYSKWNSLEPQKLPEGVLRRLGLTQPKSRHLPLHLHGREVSIPGSTGEEEGREEEGEPMLTVTCRPPRYFLHTLKKLRILWPETERLTRGQGPSDPGRRPCDLRRQALGWGKKRGLLLQDGKASAGGEGRGGEGSQSQGAEDDDTAPNLRV
SIO_010081: LOC121273077
subclass of: SO_0000673
so part of: LOC121273077
location: complement(join(635474..635896,637665..637762,638107..638257,639376..639469,697273..697474,697576..697747,701006..701185))
location: region:635474-701185:-1
so has part: feature:701006-701185:-1:exon
so has part: feature:697576-697747:-1:exon
so has part: feature:697273-697474:-1:exon
so has part: feature:639376-639469:-1:exon
so has part: feature:638107-638257:-1:exon
so has part: feature:637665-637762:-1:exon
so has part: feature:635474-635896:-1:exon

XP_041035970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:701006-701185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:697576-697747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:697273-697474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639376-639469:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638107-638257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637665-637762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635474-635896:-1:exon

pus3
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: pus3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(718206..724716)
location: region:718206-724716:-1
so has part: feature:718206-724716:-1:exon
subclass of: SO_0000010

121273058
type: Gene
SIO_000068: ncbigene

position:718206:-1
position: 718206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724716:-1
position: 724716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718206-724716:-1:exon

pus3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: pus3
product: pseudouridylate synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180010.1
SIO_010081: pus3
subclass of: SO_0000673
so part of: pus3
location: complement(join(718206..718220,718371..718567,719810..720000,722415..722944,723576..724716))
location: region:718206-724716:-1
so has part: feature:723576-724716:-1:exon
so has part: feature:722415-722944:-1:exon
so has part: feature:719810-720000:-1:exon
so has part: feature:718371-718567:-1:exon
so has part: feature:718206-718220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723576-724716:-1:exon

position:723576:-1
position: 723576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:722415-722944:-1:exon

position:722415:-1
position: 722415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722944:-1
position: 722944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:719810-720000:-1:exon

position:719810:-1
position: 719810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720000:-1
position: 720000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:718371-718567:-1:exon

position:718371:-1
position: 718371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718567:-1
position: 718567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:718206-718220:-1:exon

position:718220:-1
position: 718220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pus3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: pus3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase
translation: MMEERELAADPCPPGGAAQCPPGGAAQCPPGGAAQCPPGGAAQCPPGGAAQCPPGGGGGAQCPPGGGGGAQCPPGGGGGAQCPPGGGGGAQCPPGGGGGAQCPPGGAAQCPPGGATQCPPGGGGGAQCPPGGGGGAQCPPGGAAQCPPGGATQCPPGGGGGAQCPPGGAAQCPPGGAAQCPPGGGGGAQCPPGGAAQCPPGGGGGSQCPPGGAAQCPPGGGGGAQCLPGGAAPCPPGGGGAAQCPPGGGGPTPCPPGAGGEPAGPPDPAPGPAARRRGRRRQQEQRPFDFSLHGCRRVALRLAYLGWGYQGFASQENTGNTVEEKLFEALVKTRLVESRQTANYHRSGRTDKGVSAFGQVISLDLRSKRKGEEGDEELRYTHILNRVLPPDIRALAWAPAGPDFSARFSCRHRTYRYYFPGRGLDLALMDAAARRFEGTHDFRNLCKMDVANGVVNFRRTVLLARVGRVPGESEEEQGVSSPYGMCQFEVRGLAFLYHQVRCMAAVLFLVGQRLEEPSVVDELLDVRENPRKPQYSMAVDYPLVLYDCAYENLEWIFDPDVQAFNVTHLQGLWTQEAIKSRILYSMLQGLGQAPSERRPEDETDPLTVWARAQPPPDPRPDPLLEGVRPRRYKRLMDRERCEGLESRIRHYAKRGRIELPEELREDMSF
SIO_010081: pus3
subclass of: SO_0000673
so part of: pus3
location: complement(join(718206..718220,718371..718567,719810..720000,722415..722944,723576..724652))
location: region:718206-724652:-1
so has part: feature:723576-724652:-1:exon
so has part: feature:722415-722944:-1:exon
so has part: feature:719810-720000:-1:exon
so has part: feature:718371-718567:-1:exon
so has part: feature:718206-718220:-1:exon

XP_041035944.1
type: Protein
SIO_000068: ncbiprotein

position:724652:-1
position: 724652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723576-724652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722415-722944:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719810-720000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:718371-718567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:718206-718220:-1:exon

rusf1
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: rusf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(730067..767664)
location: region:730067-767664:-1
so has part: feature:730067-767664:-1:exon
subclass of: SO_0000010

121273078
type: Gene
SIO_000068: ncbigene

position:730067:-1
position: 730067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767664:-1
position: 767664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730067-767664:-1:exon

rusf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: rusf1
product: RUS family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180039.1
SIO_010081: rusf1
subclass of: SO_0000673
so part of: rusf1
location: complement(join(730067..730244,736067..736225,736619..736689,739230..739287,740186..740370,742679..742749,745700..745805,746456..746488,746651..746696,748082..748196,750147..750224,758735..758931,767205..767664))
location: region:730067-767664:-1
so has part: feature:767205-767664:-1:exon
so has part: feature:758735-758931:-1:exon
so has part: feature:750147-750224:-1:exon
so has part: feature:748082-748196:-1:exon
so has part: feature:746651-746696:-1:exon
so has part: feature:746456-746488:-1:exon
so has part: feature:745700-745805:-1:exon
so has part: feature:742679-742749:-1:exon
so has part: feature:740186-740370:-1:exon
so has part: feature:739230-739287:-1:exon
so has part: feature:736619-736689:-1:exon
so has part: feature:736067-736225:-1:exon
so has part: feature:730067-730244:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:767205-767664:-1:exon

position:767205:-1
position: 767205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:758735-758931:-1:exon

position:758735:-1
position: 758735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758931:-1
position: 758931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:750147-750224:-1:exon

position:750147:-1
position: 750147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750224:-1
position: 750224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:748082-748196:-1:exon

position:748082:-1
position: 748082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748196:-1
position: 748196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:746651-746696:-1:exon

position:746651:-1
position: 746651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746696:-1
position: 746696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:746456-746488:-1:exon

position:746456:-1
position: 746456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746488:-1
position: 746488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:745700-745805:-1:exon

position:745700:-1
position: 745700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745805:-1
position: 745805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:742679-742749:-1:exon

position:742679:-1
position: 742679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742749:-1
position: 742749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:740186-740370:-1:exon

position:740186:-1
position: 740186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740370:-1
position: 740370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:739230-739287:-1:exon

position:739230:-1
position: 739230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739287:-1
position: 739287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:736619-736689:-1:exon

position:736619:-1
position: 736619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736689:-1
position: 736689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:736067-736225:-1:exon

position:736067:-1
position: 736067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736225:-1
position: 736225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:730067-730244:-1:exon

position:730244:-1
position: 730244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

rusf1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: rusf1
product: RUS family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180038.1
SIO_010081: rusf1
subclass of: SO_0000673
so part of: rusf1
location: complement(join(730067..730244,736067..736225,736619..736689,739230..739287,740186..740370,742679..742749,743150..743251,745700..745805,746456..746488,746651..746696,748082..748196,750147..750224,758735..758931,767205..767663))
location: region:730067-767663:-1
so has part: feature:767205-767663:-1:exon
so has part: feature:758735-758931:-1:exon
so has part: feature:750147-750224:-1:exon
so has part: feature:748082-748196:-1:exon
so has part: feature:746651-746696:-1:exon
so has part: feature:746456-746488:-1:exon
so has part: feature:745700-745805:-1:exon
so has part: feature:743150-743251:-1:exon
so has part: feature:742679-742749:-1:exon
so has part: feature:740186-740370:-1:exon
so has part: feature:739230-739287:-1:exon
so has part: feature:736619-736689:-1:exon
so has part: feature:736067-736225:-1:exon
so has part: feature:730067-730244:-1:exon

position:767663:-1
position: 767663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767205-767663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758735-758931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750147-750224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:748082-748196:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:746651-746696:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:746456-746488:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:745700-745805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:743150-743251:-1:exon

position:743150:-1
position: 743150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743251:-1
position: 743251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:742679-742749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:740186-740370:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:739230-739287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736619-736689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736067-736225:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730067-730244:-1:exon

rusf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: rusf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUS1 family protein C16orf58 homolog isoform X2
translation: MAGEEAKILCSEHYGARRDRRYVQQGDGQLLRRSERGPEAALSLASLFTSVFLPQGYPDSVSGDYLSYQIWDTVQAFASSITGTLATQAILKGVGVGDSTATITAASMTWILKDGTGMVGRILFAWLKGSRLDCDAKKWRLFADGLNDLAIFMEIIAPAFPSIFILIVCVSGVFKETLVNLAGLLFSLILTPLATGNILLTYLLYALFTMLHLYANYQAVRAVVMDTLNQSRLRLMVNEFLRTGRVPPPRSINPREPLLPAFQRRLSIRLGTPLHSILNSAYDYQRAIENNRKNYLLGLNRNTGVVCVSLRDGAGSVDMIEAGFHAELLDELLHRDASSFRVGRVTCTELQAKLKSERDERLWDTVAATHLLVDQLYPRLLSEARAAGWLTERNHLGADEWRAQWPLEGKKGQ
SIO_010081: rusf1
subclass of: SO_0000673
so part of: rusf1
location: complement(join(730072..730244,736067..736225,736619..736689,739230..739287,740186..740370,742679..742749,745700..745805,746456..746488,746651..746696,748082..748196,750147..750224,758735..758881))
location: region:730072-758881:-1
so has part: feature:758735-758881:-1:exon
so has part: feature:750147-750224:-1:exon
so has part: feature:748082-748196:-1:exon
so has part: feature:746651-746696:-1:exon
so has part: feature:746456-746488:-1:exon
so has part: feature:745700-745805:-1:exon
so has part: feature:742679-742749:-1:exon
so has part: feature:740186-740370:-1:exon
so has part: feature:739230-739287:-1:exon
so has part: feature:736619-736689:-1:exon
so has part: feature:736067-736225:-1:exon
so has part: feature:730072-730244:-1:exon

XP_041035973.1
type: Protein
SIO_000068: ncbiprotein

position:730072:-1
position: 730072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758881:-1
position: 758881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758735-758881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750147-750224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748082-748196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746651-746696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:746456-746488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:745700-745805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:742679-742749:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740186-740370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:739230-739287:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:736619-736689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736067-736225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:730072-730244:-1:exon

rusf1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: rusf1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUS1 family protein C16orf58 homolog isoform X1
translation: MAGEEAKILCSEHYGARRDRRYVQQGDGQLLRRSERGPEAALSLASLFTSVFLPQGYPDSVSGDYLSYQIWDTVQAFASSITGTLATQAILKGVGVGDSTATITAASMTWILKDGTGMVGRILFAWLKGSRLDCDAKKWRLFADGLNDLAIFMEIIAPAFPSIFILIVCVSGVFKSVVGVSGGATRAALTMHQARRDNMADVSAKDGSQETLVNLAGLLFSLILTPLATGNILLTYLLYALFTMLHLYANYQAVRAVVMDTLNQSRLRLMVNEFLRTGRVPPPRSINPREPLLPAFQRRLSIRLGTPLHSILNSAYDYQRAIENNRKNYLLGLNRNTGVVCVSLRDGAGSVDMIEAGFHAELLDELLHRDASSFRVGRVTCTELQAKLKSERDERLWDTVAATHLLVDQLYPRLLSEARAAGWLTERNHLGADEWRAQWPLEGKKGQ
SIO_010081: rusf1
subclass of: SO_0000673
so part of: rusf1
location: complement(join(730072..730244,736067..736225,736619..736689,739230..739287,740186..740370,742679..742749,743150..743251,745700..745805,746456..746488,746651..746696,748082..748196,750147..750224,758735..758881))
location: region:730072-758881:-1
so has part: feature:758735-758881:-1:exon
so has part: feature:750147-750224:-1:exon
so has part: feature:748082-748196:-1:exon
so has part: feature:746651-746696:-1:exon
so has part: feature:746456-746488:-1:exon
so has part: feature:745700-745805:-1:exon
so has part: feature:743150-743251:-1:exon
so has part: feature:742679-742749:-1:exon
so has part: feature:740186-740370:-1:exon
so has part: feature:739230-739287:-1:exon
so has part: feature:736619-736689:-1:exon
so has part: feature:736067-736225:-1:exon
so has part: feature:730072-730244:-1:exon

XP_041035972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:758735-758881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750147-750224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748082-748196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746651-746696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:746456-746488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:745700-745805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:743150-743251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:742679-742749:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:740186-740370:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:739230-739287:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736619-736689:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:736067-736225:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:730072-730244:-1:exon

LOC121273047
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 826731..828903
location: region:826731-828903:1
so has part: feature:826731-828903:1:exon
subclass of: SO_0000010

121273047
type: Gene
SIO_000068: ncbigene

position:826731:1
position: 826731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828903:1
position: 828903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826731-828903:1:exon

LOC121273047
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273047
product: BICD family-like cargo adapter 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041179998.1
SIO_010081: LOC121273047
subclass of: SO_0000673
so part of: LOC121273047
location: join(826731..826845,828762..828903)
location: region:826731-828903:1
so has part: feature:826731-826845:1:exon
so has part: feature:828762-828903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:826731-826845:1:exon

position:826845:1
position: 826845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:828762-828903:1:exon

position:828762:1
position: 828762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273047
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BICD family-like cargo adapter 2
translation: MERGRIERESLSRQLLQTIEQKISLAQELEEWQEDMQVIISQQLKSQHLQEEAGGKARCPPVPQDGSSFFFRFRKS
SIO_010081: LOC121273047
subclass of: SO_0000673
so part of: LOC121273047
location: join(826747..826845,828762..828893)
location: region:826747-828893:1
so has part: feature:826747-826845:1:exon
so has part: feature:828762-828893:1:exon

XP_041035932.1
type: Protein
SIO_000068: ncbiprotein

position:826747:1
position: 826747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828893:1
position: 828893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826747-826845:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:828762-828893:1:exon

si:dkey-16l2.16
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: si:dkey-16l2.16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 833532..858802
location: region:833532-858802:1
so has part: feature:833532-858802:1:exon
subclass of: SO_0000010

121273076
type: Gene
SIO_000068: ncbigene

position:833532:1
position: 833532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858802:1
position: 858802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833532-858802:1:exon

si:dkey-16l2.16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: si:dkey-16l2.16
product: ras-related protein Rab-35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180035.1
SIO_010081: si:dkey-16l2.16
subclass of: SO_0000673
so part of: si:dkey-16l2.16
location: join(833532..833715,838626..838676,849077..849200,853562..853686,854701..854825,858665..858802)
location: region:833532-858802:1
so has part: feature:833532-833715:1:exon
so has part: feature:838626-838676:1:exon
so has part: feature:849077-849200:1:exon
so has part: feature:853562-853686:1:exon
so has part: feature:854701-854825:1:exon
so has part: feature:858665-858802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833532-833715:1:exon

position:833715:1
position: 833715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838626-838676:1:exon

position:838626:1
position: 838626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838676:1
position: 838676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:849077-849200:1:exon

position:849077:1
position: 849077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849200:1
position: 849200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:853562-853686:1:exon

position:853562:1
position: 853562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853686:1
position: 853686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:854701-854825:1:exon

position:854701:1
position: 854701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854825:1
position: 854825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:858665-858802:1:exon

position:858665:1
position: 858665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:dkey-16l2.16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: si:dkey-16l2.16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-35
translation: MAARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVDVNGEKVKLQIWDTAGQERFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLHEISQNCDTVTKILVGNKNEDPSRRQVDFADAKRFSEQMGICLFETSAKENTNVEEMFNAVTYMVLKCKKDNLARLHQQQNEVVKINKPKKKPGVKKCC
SIO_010081: si:dkey-16l2.16
subclass of: SO_0000673
so part of: si:dkey-16l2.16
location: join(833661..833715,838626..838676,849077..849200,853562..853686,854701..854825,858665..858796)
location: region:833661-858796:1
so has part: feature:833661-833715:1:exon
so has part: feature:838626-838676:1:exon
so has part: feature:849077-849200:1:exon
so has part: feature:853562-853686:1:exon
so has part: feature:854701-854825:1:exon
so has part: feature:858665-858796:1:exon

XP_041035969.1
type: Protein
SIO_000068: ncbiprotein

position:833661:1
position: 833661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858796:1
position: 858796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833661-833715:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838626-838676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:849077-849200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:853562-853686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854701-854825:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858665-858796:1:exon

LOC121273085
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(868045..935031)
location: region:868045-935031:-1
so has part: feature:868045-935031:-1:exon
subclass of: SO_0000010

121273085
type: Gene
SIO_000068: ncbigene

position:868045:-1
position: 868045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935031:-1
position: 935031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868045-935031:-1:exon

LOC121273085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273085
product: uncharacterized LOC121273085, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180048.1
SIO_010081: LOC121273085
subclass of: SO_0000673
so part of: LOC121273085
location: complement(join(868045..868227,870263..870439,873077..873232,874407..874460,876504..876837,934975..935031))
location: region:868045-935031:-1
so has part: feature:934975-935031:-1:exon
so has part: feature:876504-876837:-1:exon
so has part: feature:874407-874460:-1:exon
so has part: feature:873077-873232:-1:exon
so has part: feature:870263-870439:-1:exon
so has part: feature:868045-868227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934975-935031:-1:exon

position:934975:-1
position: 934975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:876504-876837:-1:exon

position:876504:-1
position: 876504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876837:-1
position: 876837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:874407-874460:-1:exon

position:874407:-1
position: 874407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874460:-1
position: 874460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:873077-873232:-1:exon

position:873077:-1
position: 873077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873232:-1
position: 873232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:870263-870439:-1:exon

position:870263:-1
position: 870263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870439:-1
position: 870439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:868045-868227:-1:exon

position:868227:-1
position: 868227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273085
product: uncharacterized LOC121273085, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180046.1
SIO_010081: LOC121273085
subclass of: SO_0000673
so part of: LOC121273085
location: complement(join(868045..868227,870263..870439,873077..873232,874407..874463,876504..876837,934975..935031))
location: region:868045-935031:-1
so has part: feature:934975-935031:-1:exon
so has part: feature:876504-876837:-1:exon
so has part: feature:874407-874463:-1:exon
so has part: feature:873077-873232:-1:exon
so has part: feature:870263-870439:-1:exon
so has part: feature:868045-868227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934975-935031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876504-876837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874407-874463:-1:exon

position:874463:-1
position: 874463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:873077-873232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870263-870439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:868045-868227:-1:exon

LOC121273085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273085
product: uncharacterized LOC121273085, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041180047.1
SIO_010081: LOC121273085
subclass of: SO_0000673
so part of: LOC121273085
location: complement(join(868045..868227,870263..870439,873077..873232,874407..874463,876504..876837,934916..935005))
location: region:868045-935005:-1
so has part: feature:934916-935005:-1:exon
so has part: feature:876504-876837:-1:exon
so has part: feature:874407-874463:-1:exon
so has part: feature:873077-873232:-1:exon
so has part: feature:870263-870439:-1:exon
so has part: feature:868045-868227:-1:exon

position:935005:-1
position: 935005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934916-935005:-1:exon

position:934916:-1
position: 934916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:876504-876837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874407-874463:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873077-873232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870263-870439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:868045-868227:-1:exon

LOC121273085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121273085 isoform X2
translation: MTKHRPHSLGVRCSLNELSFLGAARTLDPLVHTPEGSREWNTTPLLWRREVPLCMPWWSAERGAVTFTGAVMPSSTESDLPGMMKIKRRNEREGEGPSRKHFLSEEAMAARFTCLSLTNDHVYSSNGFPLAKGKDASGISFQDEESRFVLGGEEEWSTESSDRKDVIVEGMFDMSDSRVIVVSPELQRRLQRPPDDILPQEVLQSMSHPCMELVLWQSPGNLIQRAIRALSLQTEGKETEDETGGGQRLTEASQQGDQMEL
SIO_010081: LOC121273085
subclass of: SO_0000673
so part of: LOC121273085
location: complement(join(868059..868227,870263..870439,873077..873232,874407..874460,876504..876733))
location: region:868059-876733:-1
so has part: feature:876504-876733:-1:exon
so has part: feature:874407-874460:-1:exon
so has part: feature:873077-873232:-1:exon
so has part: feature:870263-870439:-1:exon
so has part: feature:868059-868227:-1:exon

XP_041035982.1
type: Protein
SIO_000068: ncbiprotein

position:868059:-1
position: 868059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876733:-1
position: 876733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876504-876733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:874407-874460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873077-873232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870263-870439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:868059-868227:-1:exon

LOC121273085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121273085 isoform X1
translation: MTKHRPHSLGVRCSLNELSFLGAARTLDPLVHTPEGSREWNTTPLLWRREVPLCMPWWSAERGAVTFTGAVMPSSTDRSDLPGMMKIKRRNEREGEGPSRKHFLSEEAMAARFTCLSLTNDHVYSSNGFPLAKGKDASGISFQDEESRFVLGGEEEWSTESSDRKDVIVEGMFDMSDSRVIVVSPELQRRLQRPPDDILPQEVLQSMSHPCMELVLWQSPGNLIQRAIRALSLQTEGKETEDETGGGQRLTEASQQGDQMEL
SIO_010081: LOC121273085
subclass of: SO_0000673
so part of: LOC121273085
location: complement(join(868059..868227,870263..870439,873077..873232,874407..874463,876504..876733))
location: region:868059-876733:-1
so has part: feature:876504-876733:-1:exon
so has part: feature:874407-874463:-1:exon
so has part: feature:873077-873232:-1:exon
so has part: feature:870263-870439:-1:exon
so has part: feature:868059-868227:-1:exon

XP_041035980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:876504-876733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:874407-874463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873077-873232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870263-870439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:868059-868227:-1:exon

LOC121273085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121273085 isoform X1
translation: MTKHRPHSLGVRCSLNELSFLGAARTLDPLVHTPEGSREWNTTPLLWRREVPLCMPWWSAERGAVTFTGAVMPSSTDRSDLPGMMKIKRRNEREGEGPSRKHFLSEEAMAARFTCLSLTNDHVYSSNGFPLAKGKDASGISFQDEESRFVLGGEEEWSTESSDRKDVIVEGMFDMSDSRVIVVSPELQRRLQRPPDDILPQEVLQSMSHPCMELVLWQSPGNLIQRAIRALSLQTEGKETEDETGGGQRLTEASQQGDQMEL
SIO_010081: LOC121273085
subclass of: SO_0000673
so part of: LOC121273085
location: complement(join(868059..868227,870263..870439,873077..873232,874407..874463,876504..876733))
location: region:868059-876733:-1
so has part: feature:876504-876733:-1:exon
so has part: feature:874407-874463:-1:exon
so has part: feature:873077-873232:-1:exon
so has part: feature:870263-870439:-1:exon
so has part: feature:868059-868227:-1:exon

XP_041035981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:876504-876733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:874407-874463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873077-873232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870263-870439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:868059-868227:-1:exon

thoc6
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: thoc6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(940066..980336)
location: region:940066-980336:-1
so has part: feature:940066-980336:-1:exon
subclass of: SO_0000010

121273072
type: Gene
SIO_000068: ncbigene

position:940066:-1
position: 940066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980336:-1
position: 980336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940066-980336:-1:exon

thoc6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: thoc6
product: THO complex 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180027.1
SIO_010081: thoc6
subclass of: SO_0000673
so part of: thoc6
location: complement(join(940066..940194,943552..943680,944681..944791,947848..947910,948849..948898,951574..951679,954406..954477,968145..968193,972034..972071,972500..972603,974215..974279,974473..974588,980216..980336))
location: region:940066-980336:-1
so has part: feature:980216-980336:-1:exon
so has part: feature:974473-974588:-1:exon
so has part: feature:974215-974279:-1:exon
so has part: feature:972500-972603:-1:exon
so has part: feature:972034-972071:-1:exon
so has part: feature:968145-968193:-1:exon
so has part: feature:954406-954477:-1:exon
so has part: feature:951574-951679:-1:exon
so has part: feature:948849-948898:-1:exon
so has part: feature:947848-947910:-1:exon
so has part: feature:944681-944791:-1:exon
so has part: feature:943552-943680:-1:exon
so has part: feature:940066-940194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:980216-980336:-1:exon

position:980216:-1
position: 980216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974473-974588:-1:exon

position:974473:-1
position: 974473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974588:-1
position: 974588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:974215-974279:-1:exon

position:974215:-1
position: 974215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974279:-1
position: 974279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:972500-972603:-1:exon

position:972500:-1
position: 972500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972603:-1
position: 972603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:972034-972071:-1:exon

position:972034:-1
position: 972034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972071:-1
position: 972071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:968145-968193:-1:exon

position:968145:-1
position: 968145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968193:-1
position: 968193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:954406-954477:-1:exon

position:954406:-1
position: 954406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954477:-1
position: 954477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:951574-951679:-1:exon

position:951574:-1
position: 951574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951679:-1
position: 951679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:948849-948898:-1:exon

position:948849:-1
position: 948849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948898:-1
position: 948898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:947848-947910:-1:exon

position:947848:-1
position: 947848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947910:-1
position: 947910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:944681-944791:-1:exon

position:944681:-1
position: 944681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944791:-1
position: 944791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:943552-943680:-1:exon

position:943552:-1
position: 943552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943680:-1
position: 943680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:940066-940194:-1:exon

position:940194:-1
position: 940194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

thoc6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: thoc6
product: THO complex 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180026.1
SIO_010081: thoc6
subclass of: SO_0000673
so part of: thoc6
location: complement(join(940066..940194,943552..943680,944681..944791,947848..947910,948849..948898,951574..951679,954406..954477,968145..968193,972034..972071,972500..972603,974215..974279,974473..974588,980207..980244))
location: region:940066-980244:-1
so has part: feature:980207-980244:-1:exon
so has part: feature:974473-974588:-1:exon
so has part: feature:974215-974279:-1:exon
so has part: feature:972500-972603:-1:exon
so has part: feature:972034-972071:-1:exon
so has part: feature:968145-968193:-1:exon
so has part: feature:954406-954477:-1:exon
so has part: feature:951574-951679:-1:exon
so has part: feature:948849-948898:-1:exon
so has part: feature:947848-947910:-1:exon
so has part: feature:944681-944791:-1:exon
so has part: feature:943552-943680:-1:exon
so has part: feature:940066-940194:-1:exon

position:980244:-1
position: 980244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980207-980244:-1:exon

position:980207:-1
position: 980207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974473-974588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974215-974279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:972500-972603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:972034-972071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:968145-968193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954406-954477:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:951574-951679:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:948849-948898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:947848-947910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:944681-944791:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:943552-943680:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:940066-940194:-1:exon

thoc6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: thoc6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 6 homolog isoform X2
translation: MAAPMADIQRRLELLHMTVFSQSFSPCGKYLAAGNNYGEIGIFSLAAALSIEATEESQRPIFTFQAHEGPVYSLVSTNRQLISSGTGDIKAWNWNDLIKKGCKEVWIRRPAFGTRLDIPEINSLVLNQKDNTLLMACGDNTIQAMDLENGVFVQTLRGHKDYIHCLALRDLNKDECISGSEDGIVRLWDLRTASQVQMIEVYKYEACARPQYGKWIGCLSTDSDWMVCGGGPALTLWHLRSVTPTTVYPLQGCQQQAMFYQDLILTAGDAPMVSHCQISGDVKAQIPCTPPSVYSLLINEHSPEHKVLTAAGSSSSIDVFTNFGYRAFSLRFS
SIO_010081: thoc6
subclass of: SO_0000673
so part of: thoc6
location: complement(join(940111..940194,943552..943680,944681..944791,947848..947910,948849..948898,951574..951679,954406..954477,968145..968193,972034..972071,972500..972603,974215..974279,974473..974588,980216..980230))
location: region:940111-980230:-1
so has part: feature:980216-980230:-1:exon
so has part: feature:974473-974588:-1:exon
so has part: feature:974215-974279:-1:exon
so has part: feature:972500-972603:-1:exon
so has part: feature:972034-972071:-1:exon
so has part: feature:968145-968193:-1:exon
so has part: feature:954406-954477:-1:exon
so has part: feature:951574-951679:-1:exon
so has part: feature:948849-948898:-1:exon
so has part: feature:947848-947910:-1:exon
so has part: feature:944681-944791:-1:exon
so has part: feature:943552-943680:-1:exon
so has part: feature:940111-940194:-1:exon

XP_041035961.1
type: Protein
SIO_000068: ncbiprotein

position:940111:-1
position: 940111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980230:-1
position: 980230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980216-980230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974473-974588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974215-974279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:972500-972603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:972034-972071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:968145-968193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954406-954477:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:951574-951679:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:948849-948898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:947848-947910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:944681-944791:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:943552-943680:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:940111-940194:-1:exon

thoc6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: thoc6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 6 homolog isoform X1
translation: MAAPMVTVADIQRRLELLHMTVFSQSFSPCGKYLAAGNNYGEIGIFSLAAALSIEATEESQRPIFTFQAHEGPVYSLVSTNRQLISSGTGDIKAWNWNDLIKKGCKEVWIRRPAFGTRLDIPEINSLVLNQKDNTLLMACGDNTIQAMDLENGVFVQTLRGHKDYIHCLALRDLNKDECISGSEDGIVRLWDLRTASQVQMIEVYKYEACARPQYGKWIGCLSTDSDWMVCGGGPALTLWHLRSVTPTTVYPLQGCQQQAMFYQDLILTAGDAPMVSHCQISGDVKAQIPCTPPSVYSLLINEHSPEHKVLTAAGSSSSIDVFTNFGYRAFSLRFS
SIO_010081: thoc6
subclass of: SO_0000673
so part of: thoc6
location: complement(join(940111..940194,943552..943680,944681..944791,947848..947910,948849..948898,951574..951679,954406..954477,968145..968193,972034..972071,972500..972603,974215..974279,974473..974588,980207..980230))
location: region:940111-980230:-1
so has part: feature:980207-980230:-1:exon
so has part: feature:974473-974588:-1:exon
so has part: feature:974215-974279:-1:exon
so has part: feature:972500-972603:-1:exon
so has part: feature:972034-972071:-1:exon
so has part: feature:968145-968193:-1:exon
so has part: feature:954406-954477:-1:exon
so has part: feature:951574-951679:-1:exon
so has part: feature:948849-948898:-1:exon
so has part: feature:947848-947910:-1:exon
so has part: feature:944681-944791:-1:exon
so has part: feature:943552-943680:-1:exon
so has part: feature:940111-940194:-1:exon

XP_041035960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:980207-980230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974473-974588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974215-974279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:972500-972603:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:972034-972071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:968145-968193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954406-954477:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:951574-951679:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:948849-948898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:947848-947910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:944681-944791:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:943552-943680:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:940111-940194:-1:exon

mmgt1
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: mmgt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 980750..994248
location: region:980750-994248:1
so has part: feature:980750-994248:1:exon
subclass of: SO_0000010

121273073
type: Gene
SIO_000068: ncbigene

position:980750:1
position: 980750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994248:1
position: 994248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980750-994248:1:exon

mmgt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: mmgt1
product: membrane magnesium transporter 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180028.1
SIO_010081: mmgt1
subclass of: SO_0000673
so part of: mmgt1
location: join(980750..980905,982008..982112,990658..990710,991985..992088,993914..994246)
location: region:980750-994246:1
so has part: feature:980750-980905:1:exon
so has part: feature:982008-982112:1:exon
so has part: feature:990658-990710:1:exon
so has part: feature:991985-992088:1:exon
so has part: feature:993914-994246:1:exon

position:994246:1
position: 994246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980750-980905:1:exon

position:980905:1
position: 980905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982008-982112:1:exon

position:982008:1
position: 982008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982112:1
position: 982112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:990658-990710:1:exon

position:990658:1
position: 990658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990710:1
position: 990710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:991985-992088:1:exon

position:991985:1
position: 991985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992088:1
position: 992088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:993914-994246:1:exon

position:993914:1
position: 993914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mmgt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: mmgt1
product: membrane magnesium transporter 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180029.1
SIO_010081: mmgt1
subclass of: SO_0000673
so part of: mmgt1
location: join(981109..981409,982008..982112,990658..990710,991985..992088,993914..994248)
location: region:981109-994248:1
so has part: feature:981109-981409:1:exon
so has part: feature:982008-982112:1:exon
so has part: feature:990658-990710:1:exon
so has part: feature:991985-992088:1:exon
so has part: feature:993914-994248:1:exon

position:981109:1
position: 981109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:981109-981409:1:exon

position:981409:1
position: 981409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982008-982112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990658-990710:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:991985-992088:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:993914-994248:1:exon

mmgt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: mmgt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 5
translation: MASSVWKGLVAVGLFALAHAAFSAAQHRSYMRLTEKENETLPIDIVLQTLLAFLITCYGIVHVAGEFKDMDATSELKNKTFETLRNHPSFYLFNHRGRVLFSPAETETKPIVQSPPSTLKLRKLEPGWR
SIO_010081: mmgt1
subclass of: SO_0000673
so part of: mmgt1
location: join(982034..982112,990658..990710,991985..992088,993914..994067)
location: region:982034-994067:1
so has part: feature:982034-982112:1:exon
so has part: feature:990658-990710:1:exon
so has part: feature:991985-992088:1:exon
so has part: feature:993914-994067:1:exon

XP_041035962.1
type: Protein
SIO_000068: ncbiprotein

position:982034:1
position: 982034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994067:1
position: 994067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982034-982112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:990658-990710:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:991985-992088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:993914-994067:1:exon

mmgt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: mmgt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER membrane protein complex subunit 5
translation: MASSVWKGLVAVGLFALAHAAFSAAQHRSYMRLTEKENETLPIDIVLQTLLAFLITCYGIVHVAGEFKDMDATSELKNKTFETLRNHPSFYLFNHRGRVLFSPAETETKPIVQSPPSTLKLRKLEPGWR
SIO_010081: mmgt1
subclass of: SO_0000673
so part of: mmgt1
location: join(982034..982112,990658..990710,991985..992088,993914..994067)
location: region:982034-994067:1
so has part: feature:982034-982112:1:exon
so has part: feature:990658-990710:1:exon
so has part: feature:991985-992088:1:exon
so has part: feature:993914-994067:1:exon

XP_041035963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:982034-982112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:990658-990710:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:991985-992088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:993914-994067:1:exon

srrm2
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: srrm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1006070..1070236
location: region:1006070-1070236:1
so has part: feature:1006070-1070236:1:exon
subclass of: SO_0000010

121273070
type: Gene
SIO_000068: ncbigene

position:1006070:1
position: 1006070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070236:1
position: 1070236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006070-1070236:1:exon

srrm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: srrm2
product: serine/arginine repetitive matrix 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041180025.1
SIO_010081: srrm2
subclass of: SO_0000673
so part of: srrm2
location: join(1006070..1006278,1022148..1022414,1023225..1023326,1029308..1029469,1030165..1030242,1031027..1031089,1033809..1033859,1035734..1035835,1040686..1040914,1046475..1048798,1053653..1053928,1056379..1056492,1065598..1065696,1069922..1070236)
location: region:1006070-1070236:1
so has part: feature:1006070-1006278:1:exon
so has part: feature:1022148-1022414:1:exon
so has part: feature:1023225-1023326:1:exon
so has part: feature:1029308-1029469:1:exon
so has part: feature:1030165-1030242:1:exon
so has part: feature:1031027-1031089:1:exon
so has part: feature:1033809-1033859:1:exon
so has part: feature:1035734-1035835:1:exon
so has part: feature:1040686-1040914:1:exon
so has part: feature:1046475-1048798:1:exon
so has part: feature:1053653-1053928:1:exon
so has part: feature:1056379-1056492:1:exon
so has part: feature:1065598-1065696:1:exon
so has part: feature:1069922-1070236:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1006070-1006278:1:exon

position:1006278:1
position: 1006278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1022148-1022414:1:exon

position:1022148:1
position: 1022148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022414:1
position: 1022414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023225-1023326:1:exon

position:1023225:1
position: 1023225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023326:1
position: 1023326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1029308-1029469:1:exon

position:1029308:1
position: 1029308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029469:1
position: 1029469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1030165-1030242:1:exon

position:1030165:1
position: 1030165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030242:1
position: 1030242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1031027-1031089:1:exon

position:1031027:1
position: 1031027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031089:1
position: 1031089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1033809-1033859:1:exon

position:1033809:1
position: 1033809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033859:1
position: 1033859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1035734-1035835:1:exon

position:1035734:1
position: 1035734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035835:1
position: 1035835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1040686-1040914:1:exon

position:1040686:1
position: 1040686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040914:1
position: 1040914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1046475-1048798:1:exon

position:1046475:1
position: 1046475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048798:1
position: 1048798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1053653-1053928:1:exon

position:1053653:1
position: 1053653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053928:1
position: 1053928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1056379-1056492:1:exon

position:1056379:1
position: 1056379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056492:1
position: 1056492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1065598-1065696:1:exon

position:1065598:1
position: 1065598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065696:1
position: 1065696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1069922-1070236:1:exon

position:1069922:1
position: 1069922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

srrm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: srrm2
product: serine/arginine repetitive matrix 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180024.1
SIO_010081: srrm2
subclass of: SO_0000673
so part of: srrm2
location: join(1006070..1006278,1022151..1022414,1023225..1023326,1029308..1029469,1030165..1030242,1031027..1031089,1031234..1031269,1033809..1033859,1035734..1035835,1040686..1040914,1046475..1048798,1053653..1053928,1056379..1056492,1065598..1065696,1069922..1070236)
location: region:1006070-1070236:1
so has part: feature:1006070-1006278:1:exon
so has part: feature:1022151-1022414:1:exon
so has part: feature:1023225-1023326:1:exon
so has part: feature:1029308-1029469:1:exon
so has part: feature:1030165-1030242:1:exon
so has part: feature:1031027-1031089:1:exon
so has part: feature:1031234-1031269:1:exon
so has part: feature:1033809-1033859:1:exon
so has part: feature:1035734-1035835:1:exon
so has part: feature:1040686-1040914:1:exon
so has part: feature:1046475-1048798:1:exon
so has part: feature:1053653-1053928:1:exon
so has part: feature:1056379-1056492:1:exon
so has part: feature:1065598-1065696:1:exon
so has part: feature:1069922-1070236:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1006070-1006278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1022151-1022414:1:exon

position:1022151:1
position: 1022151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023225-1023326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029308-1029469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030165-1030242:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1031027-1031089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1031234-1031269:1:exon

position:1031234:1
position: 1031234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031269:1
position: 1031269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1033809-1033859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1035734-1035835:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040686-1040914:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1046475-1048798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1053653-1053928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1056379-1056492:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1065598-1065696:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069922-1070236:1:exon

srrm2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: srrm2
product: serine/arginine repetitive matrix 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180023.1
SIO_010081: srrm2
subclass of: SO_0000673
so part of: srrm2
location: join(1006070..1006278,1022148..1022414,1023225..1023326,1029308..1029469,1030165..1030242,1031027..1031089,1031234..1031269,1033809..1033859,1035734..1035835,1040686..1040914,1046475..1048798,1053653..1053928,1056379..1056492,1065598..1065696,1069922..1070235)
location: region:1006070-1070235:1
so has part: feature:1006070-1006278:1:exon
so has part: feature:1022148-1022414:1:exon
so has part: feature:1023225-1023326:1:exon
so has part: feature:1029308-1029469:1:exon
so has part: feature:1030165-1030242:1:exon
so has part: feature:1031027-1031089:1:exon
so has part: feature:1031234-1031269:1:exon
so has part: feature:1033809-1033859:1:exon
so has part: feature:1035734-1035835:1:exon
so has part: feature:1040686-1040914:1:exon
so has part: feature:1046475-1048798:1:exon
so has part: feature:1053653-1053928:1:exon
so has part: feature:1056379-1056492:1:exon
so has part: feature:1065598-1065696:1:exon
so has part: feature:1069922-1070235:1:exon

position:1070235:1
position: 1070235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006070-1006278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1022148-1022414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023225-1023326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1029308-1029469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030165-1030242:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1031027-1031089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1031234-1031269:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1033809-1033859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1035734-1035835:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040686-1040914:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1046475-1048798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1053653-1053928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1056379-1056492:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1065598-1065696:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069922-1070235:1:exon

srrm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: srrm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 2 isoform X1
translation: MYNGIGLPTPRGSGTNGYVQRNLSSVRHKKDRVDYKSEEELKKLESGLVKKPNQDILDHERKRKVELKCIELEDLMEEQGYSEEEIQQKVATFRQMLVEKDGSQGKEEPKTRTVVGETHQLAEANEKKNERLRAAFGISDSYVDGSSFDPKRRTQEAAGKSDQQKQHGIIREAVRSRSPSPKRRKKKKARSRGRSASPSARSKEKKKKSSKKKGRSQSKSKSKKKHRSTSPKSKRGTKEKKRKRSPSHSPPRKHRRARSSSTSQNSSSSRSSSLSRSRSRSPKVAPAAPPAARGSPSPRPAARSELEGRTAESAAARRTSPARGPSPASPERHGPRARSTSGSPRQDAGRNKRESSVDASPVQRSRPQPVSLSPAGPSERTSSRWAGRRGSGSPAPGGASGEPGSRGGRNPRGRSRGSPRPPPTTPPAARGFPRSPSRGTRHDRSPPQPRGSRQSPRRGGGGGGASPRRGRSPPRRERHNKAPSSPPPPSRSVTPRREGSSPRQAKAPAARRSASPRRETSSSSSSRRGRSPPRQARASPVRSPSPRRQRSPPRKGSPSPRRERSPPRRGRPSPRRGRSSPGRSASPRPKRSSPWRGRSSPRQAKASPRGSASPRPHQRSPFRCKRSPSRQSKAPRRGSESPRPERPSLRPAKASPRRSKSPRRQRSPPRRERSAPRTEKSPARRSLSPRHQRSPPRTEKSPPRRSVSPRRQRSSSRTERSPPRRSVSPRRQRSSPRRSVSPRRQRSSSRTERSSPRRSVSPRHQRPSPRAERSSPRRSVSPRRQRSSPRRSVSPRHQRSSPRTEGSSPTRSISPRRDRSSPRTESSSPRRSMSPRQSKASRKGSESPRAERPSLRQTKASPRGSKSPRRQRSSPRRERSLSRQNKASPRRSKSPRQTKASPRGSVSPRRERSSSRQNKASPRRSESPRCQRSSPERTQHSPPDSERLSPRGGASPAWHSKSPPGTSPTPGGVEGPPQPEDRPAPAQEQLPPGGSGSPVSPEVRRAEPAGGGGGASPPCRPPAEGGKRREEGPPPQARTPPGRPADPPSPGAGAAALRQRTPSAPKSPQPSRSRSPSPSRATEQEPARRPSPPSQRRRTSRSPSSSSSSDSLSSHSPTPPRERDERKDRNAAAKRRARSRSSSSDRGRRRSRSPARRGAPGHGRPRRSPSEPRRRGGRGSHRRRQRGRTSSSLSGSSSSRSRSAPRRRVEPKRRSPPPHRRRTRSPRKPIDSLRDSRSLSYSPVERRRSRQSRDTYSRRERERRRRHSDSESPVRKRRHDSPSPRDRRRYRRSP
SIO_010081: srrm2
subclass of: SO_0000673
so part of: srrm2
location: join(1022176..1022414,1023225..1023326,1029308..1029469,1030165..1030242,1031027..1031089,1031234..1031269,1033809..1033859,1035734..1035835,1040686..1040914,1046475..1048798,1053653..1053928,1056379..1056492,1065598..1065696,1069922..1069931)
location: region:1022176-1069931:1
so has part: feature:1022176-1022414:1:exon
so has part: feature:1023225-1023326:1:exon
so has part: feature:1029308-1029469:1:exon
so has part: feature:1030165-1030242:1:exon
so has part: feature:1031027-1031089:1:exon
so has part: feature:1031234-1031269:1:exon
so has part: feature:1033809-1033859:1:exon
so has part: feature:1035734-1035835:1:exon
so has part: feature:1040686-1040914:1:exon
so has part: feature:1046475-1048798:1:exon
so has part: feature:1053653-1053928:1:exon
so has part: feature:1056379-1056492:1:exon
so has part: feature:1065598-1065696:1:exon
so has part: feature:1069922-1069931:1:exon

XP_041035957.1
type: Protein
SIO_000068: ncbiprotein

position:1022176:1
position: 1022176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069931:1
position: 1069931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022176-1022414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023225-1023326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029308-1029469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030165-1030242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031027-1031089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1031234-1031269:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033809-1033859:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035734-1035835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1040686-1040914:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046475-1048798:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1053653-1053928:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1056379-1056492:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065598-1065696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1069922-1069931:1:exon

srrm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: srrm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 2 isoform X1
translation: MYNGIGLPTPRGSGTNGYVQRNLSSVRHKKDRVDYKSEEELKKLESGLVKKPNQDILDHERKRKVELKCIELEDLMEEQGYSEEEIQQKVATFRQMLVEKDGSQGKEEPKTRTVVGETHQLAEANEKKNERLRAAFGISDSYVDGSSFDPKRRTQEAAGKSDQQKQHGIIREAVRSRSPSPKRRKKKKARSRGRSASPSARSKEKKKKSSKKKGRSQSKSKSKKKHRSTSPKSKRGTKEKKRKRSPSHSPPRKHRRARSSSTSQNSSSSRSSSLSRSRSRSPKVAPAAPPAARGSPSPRPAARSELEGRTAESAAARRTSPARGPSPASPERHGPRARSTSGSPRQDAGRNKRESSVDASPVQRSRPQPVSLSPAGPSERTSSRWAGRRGSGSPAPGGASGEPGSRGGRNPRGRSRGSPRPPPTTPPAARGFPRSPSRGTRHDRSPPQPRGSRQSPRRGGGGGGASPRRGRSPPRRERHNKAPSSPPPPSRSVTPRREGSSPRQAKAPAARRSASPRRETSSSSSSRRGRSPPRQARASPVRSPSPRRQRSPPRKGSPSPRRERSPPRRGRPSPRRGRSSPGRSASPRPKRSSPWRGRSSPRQAKASPRGSASPRPHQRSPFRCKRSPSRQSKAPRRGSESPRPERPSLRPAKASPRRSKSPRRQRSPPRRERSAPRTEKSPARRSLSPRHQRSPPRTEKSPPRRSVSPRRQRSSSRTERSPPRRSVSPRRQRSSPRRSVSPRRQRSSSRTERSSPRRSVSPRHQRPSPRAERSSPRRSVSPRRQRSSPRRSVSPRHQRSSPRTEGSSPTRSISPRRDRSSPRTESSSPRRSMSPRQSKASRKGSESPRAERPSLRQTKASPRGSKSPRRQRSSPRRERSLSRQNKASPRRSKSPRQTKASPRGSVSPRRERSSSRQNKASPRRSESPRCQRSSPERTQHSPPDSERLSPRGGASPAWHSKSPPGTSPTPGGVEGPPQPEDRPAPAQEQLPPGGSGSPVSPEVRRAEPAGGGGGASPPCRPPAEGGKRREEGPPPQARTPPGRPADPPSPGAGAAALRQRTPSAPKSPQPSRSRSPSPSRATEQEPARRPSPPSQRRRTSRSPSSSSSSDSLSSHSPTPPRERDERKDRNAAAKRRARSRSSSSDRGRRRSRSPARRGAPGHGRPRRSPSEPRRRGGRGSHRRRQRGRTSSSLSGSSSSRSRSAPRRRVEPKRRSPPPHRRRTRSPRKPIDSLRDSRSLSYSPVERRRSRQSRDTYSRRERERRRRHSDSESPVRKRRHDSPSPRDRRRYRRSP
SIO_010081: srrm2
subclass of: SO_0000673
so part of: srrm2
location: join(1022176..1022414,1023225..1023326,1029308..1029469,1030165..1030242,1031027..1031089,1031234..1031269,1033809..1033859,1035734..1035835,1040686..1040914,1046475..1048798,1053653..1053928,1056379..1056492,1065598..1065696,1069922..1069931)
location: region:1022176-1069931:1
so has part: feature:1022176-1022414:1:exon
so has part: feature:1023225-1023326:1:exon
so has part: feature:1029308-1029469:1:exon
so has part: feature:1030165-1030242:1:exon
so has part: feature:1031027-1031089:1:exon
so has part: feature:1031234-1031269:1:exon
so has part: feature:1033809-1033859:1:exon
so has part: feature:1035734-1035835:1:exon
so has part: feature:1040686-1040914:1:exon
so has part: feature:1046475-1048798:1:exon
so has part: feature:1053653-1053928:1:exon
so has part: feature:1056379-1056492:1:exon
so has part: feature:1065598-1065696:1:exon
so has part: feature:1069922-1069931:1:exon

XP_041035958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1022176-1022414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023225-1023326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029308-1029469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030165-1030242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031027-1031089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1031234-1031269:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033809-1033859:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1035734-1035835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1040686-1040914:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046475-1048798:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1053653-1053928:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1056379-1056492:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065598-1065696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1069922-1069931:1:exon

srrm2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: srrm2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 2 isoform X2
translation: MYNGIGLPTPRGSGTNGYVQRNLSSVRHKKDRVDYKSEEELKKLESGLVKKPNQDILDHERKRKVELKCIELEDLMEEQGYSEEEIQQKVATFRQMLVEKDGSQGKEEPKTRTVVGETHQLAEANEKKNERLRAAFGISDSYVDGSSFDPKRRTQEAAGKSDQQKQHGIIREAVRSRSPSPKRRKKKKARSRGRSASPSARSKEKKKKSSKKKGRSTSPKSKRGTKEKKRKRSPSHSPPRKHRRARSSSTSQNSSSSRSSSLSRSRSRSPKVAPAAPPAARGSPSPRPAARSELEGRTAESAAARRTSPARGPSPASPERHGPRARSTSGSPRQDAGRNKRESSVDASPVQRSRPQPVSLSPAGPSERTSSRWAGRRGSGSPAPGGASGEPGSRGGRNPRGRSRGSPRPPPTTPPAARGFPRSPSRGTRHDRSPPQPRGSRQSPRRGGGGGGASPRRGRSPPRRERHNKAPSSPPPPSRSVTPRREGSSPRQAKAPAARRSASPRRETSSSSSSRRGRSPPRQARASPVRSPSPRRQRSPPRKGSPSPRRERSPPRRGRPSPRRGRSSPGRSASPRPKRSSPWRGRSSPRQAKASPRGSASPRPHQRSPFRCKRSPSRQSKAPRRGSESPRPERPSLRPAKASPRRSKSPRRQRSPPRRERSAPRTEKSPARRSLSPRHQRSPPRTEKSPPRRSVSPRRQRSSSRTERSPPRRSVSPRRQRSSPRRSVSPRRQRSSSRTERSSPRRSVSPRHQRPSPRAERSSPRRSVSPRRQRSSPRRSVSPRHQRSSPRTEGSSPTRSISPRRDRSSPRTESSSPRRSMSPRQSKASRKGSESPRAERPSLRQTKASPRGSKSPRRQRSSPRRERSLSRQNKASPRRSKSPRQTKASPRGSVSPRRERSSSRQNKASPRRSESPRCQRSSPERTQHSPPDSERLSPRGGASPAWHSKSPPGTSPTPGGVEGPPQPEDRPAPAQEQLPPGGSGSPVSPEVRRAEPAGGGGGASPPCRPPAEGGKRREEGPPPQARTPPGRPADPPSPGAGAAALRQRTPSAPKSPQPSRSRSPSPSRATEQEPARRPSPPSQRRRTSRSPSSSSSSDSLSSHSPTPPRERDERKDRNAAAKRRARSRSSSSDRGRRRSRSPARRGAPGHGRPRRSPSEPRRRGGRGSHRRRQRGRTSSSLSGSSSSRSRSAPRRRVEPKRRSPPPHRRRTRSPRKPIDSLRDSRSLSYSPVERRRSRQSRDTYSRRERERRRRHSDSESPVRKRRHDSPSPRDRRRYRRSP
SIO_010081: srrm2
subclass of: SO_0000673
so part of: srrm2
location: join(1022176..1022414,1023225..1023326,1029308..1029469,1030165..1030242,1031027..1031089,1033809..1033859,1035734..1035835,1040686..1040914,1046475..1048798,1053653..1053928,1056379..1056492,1065598..1065696,1069922..1069931)
location: region:1022176-1069931:1
so has part: feature:1022176-1022414:1:exon
so has part: feature:1023225-1023326:1:exon
so has part: feature:1029308-1029469:1:exon
so has part: feature:1030165-1030242:1:exon
so has part: feature:1031027-1031089:1:exon
so has part: feature:1033809-1033859:1:exon
so has part: feature:1035734-1035835:1:exon
so has part: feature:1040686-1040914:1:exon
so has part: feature:1046475-1048798:1:exon
so has part: feature:1053653-1053928:1:exon
so has part: feature:1056379-1056492:1:exon
so has part: feature:1065598-1065696:1:exon
so has part: feature:1069922-1069931:1:exon

XP_041035959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1022176-1022414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023225-1023326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1029308-1029469:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030165-1030242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031027-1031089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033809-1033859:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035734-1035835:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1040686-1040914:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046475-1048798:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1053653-1053928:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1056379-1056492:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1065598-1065696:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1069922-1069931:1:exon

elob
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: elob
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1144737..1225630)
location: region:1144737-1225630:-1
so has part: feature:1144737-1225630:-1:exon
subclass of: SO_0000010

121273082
type: Gene
SIO_000068: ncbigene

position:1144737:-1
position: 1144737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225630:-1
position: 1225630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1144737-1225630:-1:exon

elob
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: elob
product: elongin B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180043.1
SIO_010081: elob
subclass of: SO_0000673
so part of: elob
location: complement(join(1144737..1144885,1161952..1162060,1217400..1217534,1225504..1225630))
location: region:1144737-1225630:-1
so has part: feature:1225504-1225630:-1:exon
so has part: feature:1217400-1217534:-1:exon
so has part: feature:1161952-1162060:-1:exon
so has part: feature:1144737-1144885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225504-1225630:-1:exon

position:1225504:-1
position: 1225504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1217400-1217534:-1:exon

position:1217400:-1
position: 1217400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217534:-1
position: 1217534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1161952-1162060:-1:exon

position:1161952:-1
position: 1161952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162060:-1
position: 1162060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1144737-1144885:-1:exon

position:1144885:-1
position: 1144885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

elob
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: elob
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin-B
translation: MDVFLMIRRHRTTIFTDAKESTTVLELKKVVEGILKRLPEDQRLYKDDQLLEDGKTLGDCGFTSQTARPQAPATVGLAFKSVDDQFEPLRIDQFSSPPELPDVMKPQDSGSGANEQAVQ
SIO_010081: elob
subclass of: SO_0000673
so part of: elob
location: complement(join(1144773..1144885,1161952..1162060,1217400..1217534,1225504..1225506))
location: region:1144773-1225506:-1
so has part: feature:1225504-1225506:-1:exon
so has part: feature:1217400-1217534:-1:exon
so has part: feature:1161952-1162060:-1:exon
so has part: feature:1144773-1144885:-1:exon

XP_041035977.1
type: Protein
SIO_000068: ncbiprotein

position:1144773:-1
position: 1144773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225506:-1
position: 1225506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225504-1225506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217400-1217534:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1161952-1162060:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1144773-1144885:-1:exon

pkmyt1
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: pkmyt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1227230..1283994
location: region:1227230-1283994:1
so has part: feature:1227230-1283994:1:exon
subclass of: SO_0000010

121273081
type: Gene
SIO_000068: ncbigene

position:1227230:1
position: 1227230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283994:1
position: 1283994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227230-1283994:1:exon

pkmyt1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: pkmyt1
product: protein kinase, membrane associated tyrosine/threonine 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180041.1
SIO_010081: pkmyt1
subclass of: SO_0000673
so part of: pkmyt1
location: join(1227230..1227329,1228048..1228555,1237015..1237505,1240256..1240362,1244761..1244933,1253241..1253500,1254716..1254814,1283739..1283994)
location: region:1227230-1283994:1
so has part: feature:1227230-1227329:1:exon
so has part: feature:1228048-1228555:1:exon
so has part: feature:1237015-1237505:1:exon
so has part: feature:1240256-1240362:1:exon
so has part: feature:1244761-1244933:1:exon
so has part: feature:1253241-1253500:1:exon
so has part: feature:1254716-1254814:1:exon
so has part: feature:1283739-1283994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1227230-1227329:1:exon

position:1227329:1
position: 1227329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228048-1228555:1:exon

position:1228048:1
position: 1228048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228555:1
position: 1228555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1237015-1237505:1:exon

position:1237015:1
position: 1237015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237505:1
position: 1237505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1240256-1240362:1:exon

position:1240256:1
position: 1240256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240362:1
position: 1240362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1244761-1244933:1:exon

position:1244761:1
position: 1244761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244933:1
position: 1244933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1253241-1253500:1:exon

position:1253241:1
position: 1253241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253500:1
position: 1253500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1254716-1254814:1:exon

position:1254716:1
position: 1254716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254814:1
position: 1254814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1283739-1283994:1:exon

position:1283739:1
position: 1283739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

pkmyt1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: pkmyt1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase
translation: MGDSHLTRTPIPVPTFFKQAEGSFSLKRRGRPGSHSLTPRPPVKTALPVSRVFPRRQQAWSHPRPQSVSGKESAAQRLSSRVYDESKEDLYFEQCFQKIIKLGHGSFGEVFKVRSKEDGKLYAVKRSMELFRGESDRSRKLEEAQKHERLGAHANLVGFVRAWEEGRRLYIQTELCDASLQQYAEGRCPLPERRVWAFLADLAAALKHLHDRGLAHMDVKPANVFVAGGRLCKLGDFGLLLELDGGDFSDAQEGDPKYMAPELLDGVYSKAADVFSLGMTILDISCNLELPRSGDGWQKLRQGYLPQEFVSGLSPGLLEVLRAMLQPDFRLRISVDKLLALPALHRVQRQRQIELLVHVGLNRALSLCRFLLSLLYYLWHAVSGPVNRLLSRRARTPPTSPVPTAFQESGLYSDWEDSSLGEDVFPLDPRTIPPKVLFPHQPEGPDPGEPAFLGNSVLLSPVNVSSRPSMGSTSTPRHASTDENPSLRRSSSRGSPNLSRISPDSPCGRFSPDPADRRPPSLEDDGLPLARGVFEPRNLLSLFDESMEGD
SIO_010081: pkmyt1
subclass of: SO_0000673
so part of: pkmyt1
location: join(1228220..1228555,1237015..1237505,1240256..1240362,1244761..1244933,1253241..1253500,1254716..1254814,1283739..1283925)
location: region:1228220-1283925:1
so has part: feature:1228220-1228555:1:exon
so has part: feature:1237015-1237505:1:exon
so has part: feature:1240256-1240362:1:exon
so has part: feature:1244761-1244933:1:exon
so has part: feature:1253241-1253500:1:exon
so has part: feature:1254716-1254814:1:exon
so has part: feature:1283739-1283925:1:exon

XP_041035975.1
type: Protein
SIO_000068: ncbiprotein

position:1228220:1
position: 1228220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283925:1
position: 1283925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228220-1228555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237015-1237505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1240256-1240362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244761-1244933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1253241-1253500:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254716-1254814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1283739-1283925:1:exon

pelo
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: pelo
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1353017..1394876)
location: region:1353017-1394876:-1
so has part: feature:1353017-1394876:-1:exon
subclass of: SO_0000010

121273074
type: Gene
SIO_000068: ncbigene

position:1353017:-1
position: 1353017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394876:-1
position: 1394876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1353017-1394876:-1:exon

pelo
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: pelo
product: pelota mRNA surveillance and ribosome rescue factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041180032.1
SIO_010081: pelo
subclass of: SO_0000673
so part of: pelo
location: complement(join(1353017..1353416,1354942..1354973,1360568..1360642,1375800..1375873,1378383..1378429,1385287..1385448,1385955..1386015,1386946..1387109,1389050..1389140,1390750..1390900,1392271..1392363,1394702..1394876))
location: region:1353017-1394876:-1
so has part: feature:1394702-1394876:-1:exon
so has part: feature:1392271-1392363:-1:exon
so has part: feature:1390750-1390900:-1:exon
so has part: feature:1389050-1389140:-1:exon
so has part: feature:1386946-1387109:-1:exon
so has part: feature:1385955-1386015:-1:exon
so has part: feature:1385287-1385448:-1:exon
so has part: feature:1378383-1378429:-1:exon
so has part: feature:1375800-1375873:-1:exon
so has part: feature:1360568-1360642:-1:exon
so has part: feature:1354942-1354973:-1:exon
so has part: feature:1353017-1353416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1394702-1394876:-1:exon

position:1394702:-1
position: 1394702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1392271-1392363:-1:exon

position:1392271:-1
position: 1392271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392363:-1
position: 1392363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1390750-1390900:-1:exon

position:1390750:-1
position: 1390750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1390900:-1
position: 1390900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1389050-1389140:-1:exon

position:1389050:-1
position: 1389050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389140:-1
position: 1389140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1386946-1387109:-1:exon

position:1386946:-1
position: 1386946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387109:-1
position: 1387109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1385955-1386015:-1:exon

position:1385955:-1
position: 1385955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386015:-1
position: 1386015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1385287-1385448:-1:exon

position:1385287:-1
position: 1385287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385448:-1
position: 1385448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1378383-1378429:-1:exon

position:1378383:-1
position: 1378383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378429:-1
position: 1378429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1375800-1375873:-1:exon

position:1375800:-1
position: 1375800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375873:-1
position: 1375873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1360568-1360642:-1:exon

position:1360568:-1
position: 1360568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360642:-1
position: 1360642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1354942-1354973:-1:exon

position:1354942:-1
position: 1354942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354973:-1
position: 1354973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1353017-1353416:-1:exon

position:1353416:-1
position: 1353416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

pelo
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: pelo
product: pelota mRNA surveillance and ribosome rescue factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041180031.1
SIO_010081: pelo
subclass of: SO_0000673
so part of: pelo
location: complement(join(1353017..1353416,1354942..1354973,1360568..1360642,1371031..1371102,1375800..1375873,1378383..1378429,1385287..1385448,1385955..1386015,1386946..1387109,1389050..1389140,1390750..1390900,1392271..1392363,1394702..1394875))
location: region:1353017-1394875:-1
so has part: feature:1394702-1394875:-1:exon
so has part: feature:1392271-1392363:-1:exon
so has part: feature:1390750-1390900:-1:exon
so has part: feature:1389050-1389140:-1:exon
so has part: feature:1386946-1387109:-1:exon
so has part: feature:1385955-1386015:-1:exon
so has part: feature:1385287-1385448:-1:exon
so has part: feature:1378383-1378429:-1:exon
so has part: feature:1375800-1375873:-1:exon
so has part: feature:1371031-1371102:-1:exon
so has part: feature:1360568-1360642:-1:exon
so has part: feature:1354942-1354973:-1:exon
so has part: feature:1353017-1353416:-1:exon

position:1394875:-1
position: 1394875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1394702-1394875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1392271-1392363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1390750-1390900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1389050-1389140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1386946-1387109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1385955-1386015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1385287-1385448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1378383-1378429:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1375800-1375873:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1371031-1371102:-1:exon

position:1371031:-1
position: 1371031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371102:-1
position: 1371102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1360568-1360642:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1354942-1354973:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1353017-1353416:-1:exon

pelo
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: pelo
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein pelota homolog isoform X2
translation: MKLLSKLMDKDNSGQITLMPEEAEDMWHTYNLLQIQDSLRASTFRKVQTESSTGSVGSNRVRTTLTICVETIDFDAQGCMLRVKGTNIQENEYVKMGAYHTIELELNRKFTLAKKQWDSIVLDRIEQACDPGHSADVGAVVMQEGLAHICLVTSSMTVLRAKVETTIPRKRKGSCTQHDKALEKFYESVMQGIIRHINFDVVKCVLVASPGFVKEQFCNYMFEQAVKMDIKLILENRSKFLQVHSSSGHKYALKEVLSDSSVVGRLSDTKAAGEVKALEDFYKMLQHEPDRAFYGSQDIAKRSRYVKLVDSVRDNGGTVRMFSSLHVSGEQLNQLTGVAAILRFPVSEMSDQEDDSTTDSD
SIO_010081: pelo
subclass of: SO_0000673
so part of: pelo
location: complement(join(1353322..1353416,1354942..1354973,1360568..1360642,1375800..1375873,1378383..1378429,1385287..1385448,1385955..1386015,1386946..1387109,1389050..1389140,1390750..1390900,1392271..1392363,1394702..1394742))
location: region:1353322-1394742:-1
so has part: feature:1394702-1394742:-1:exon
so has part: feature:1392271-1392363:-1:exon
so has part: feature:1390750-1390900:-1:exon
so has part: feature:1389050-1389140:-1:exon
so has part: feature:1386946-1387109:-1:exon
so has part: feature:1385955-1386015:-1:exon
so has part: feature:1385287-1385448:-1:exon
so has part: feature:1378383-1378429:-1:exon
so has part: feature:1375800-1375873:-1:exon
so has part: feature:1360568-1360642:-1:exon
so has part: feature:1354942-1354973:-1:exon
so has part: feature:1353322-1353416:-1:exon

XP_041035966.1
type: Protein
SIO_000068: ncbiprotein

position:1353322:-1
position: 1353322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394742:-1
position: 1394742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1394702-1394742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1392271-1392363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1390750-1390900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1389050-1389140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1386946-1387109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1385955-1386015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1385287-1385448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1378383-1378429:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1375800-1375873:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1360568-1360642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1354942-1354973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1353322-1353416:-1:exon

pelo
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: pelo
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein pelota homolog isoform X1
translation: MKLLSKLMDKDNSGQITLMPEEAEDMWHTYNLLQIQDSLRASTFRKVQTESSTGSVGSNRVRTTLTICVETIDFDAQGCMLRVKGTNIQENEYVKMGAYHTIELELNRKFTLAKKQWDSIVLDRIEQACDPGHSADVGAVVMQEGLAHICLVTSSMTVLRAKVETTIPRKRKGSCTQHDKALEKFYESVMQGIIRHINFDVVKCVLVASPGFVKEQFCNYMFEQAVKMDIKLILENRSKFLQVHSSSGHKYALKEVLSDSSVVGRLSDTKAAGEVKALEDFYKMLQHEPDRAFYGIKHVERANKELAVETLLITDELFRSQDIAKRSRYVKLVDSVRDNGGTVRMFSSLHVSGEQLNQLTGVAAILRFPVSEMSDQEDDSTTDSD
SIO_010081: pelo
subclass of: SO_0000673
so part of: pelo
location: complement(join(1353322..1353416,1354942..1354973,1360568..1360642,1371031..1371102,1375800..1375873,1378383..1378429,1385287..1385448,1385955..1386015,1386946..1387109,1389050..1389140,1390750..1390900,1392271..1392363,1394702..1394742))
location: region:1353322-1394742:-1
so has part: feature:1394702-1394742:-1:exon
so has part: feature:1392271-1392363:-1:exon
so has part: feature:1390750-1390900:-1:exon
so has part: feature:1389050-1389140:-1:exon
so has part: feature:1386946-1387109:-1:exon
so has part: feature:1385955-1386015:-1:exon
so has part: feature:1385287-1385448:-1:exon
so has part: feature:1378383-1378429:-1:exon
so has part: feature:1375800-1375873:-1:exon
so has part: feature:1371031-1371102:-1:exon
so has part: feature:1360568-1360642:-1:exon
so has part: feature:1354942-1354973:-1:exon
so has part: feature:1353322-1353416:-1:exon

XP_041035965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1394702-1394742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1392271-1392363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1390750-1390900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1389050-1389140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1386946-1387109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1385955-1386015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1385287-1385448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1378383-1378429:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1375800-1375873:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1371031-1371102:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1360568-1360642:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1354942-1354973:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1353322-1353416:-1:exon

LOC121273087
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1397485..1416907
location: region:1397485-1416907:1
so has part: feature:1397485-1416907:1:exon
subclass of: SO_0000010

121273087
type: Gene
SIO_000068: ncbigene

position:1397485:1
position: 1397485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416907:1
position: 1416907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397485-1416907:1:exon

LOC121273087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273087
product: guanylate-binding protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041180052.1
SIO_010081: LOC121273087
subclass of: SO_0000673
so part of: LOC121273087
location: join(1397485..1397847,1400506..1400631,1401531..1401798,1403477..1403604,1405654..1405763,1406941..1407128,1410011..1410291,1411315..1411527,1414454..1414556,1415983..1416907)
location: region:1397485-1416907:1
so has part: feature:1397485-1397847:1:exon
so has part: feature:1400506-1400631:1:exon
so has part: feature:1401531-1401798:1:exon
so has part: feature:1403477-1403604:1:exon
so has part: feature:1405654-1405763:1:exon
so has part: feature:1406941-1407128:1:exon
so has part: feature:1410011-1410291:1:exon
so has part: feature:1411315-1411527:1:exon
so has part: feature:1414454-1414556:1:exon
so has part: feature:1415983-1416907:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1397485-1397847:1:exon

position:1397847:1
position: 1397847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1400506-1400631:1:exon

position:1400506:1
position: 1400506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400631:1
position: 1400631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1401531-1401798:1:exon

position:1401531:1
position: 1401531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401798:1
position: 1401798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1403477-1403604:1:exon

position:1403477:1
position: 1403477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403604:1
position: 1403604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1405654-1405763:1:exon

position:1405654:1
position: 1405654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1405763:1
position: 1405763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1406941-1407128:1:exon

position:1406941:1
position: 1406941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407128:1
position: 1407128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1410011-1410291:1:exon

position:1410011:1
position: 1410011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410291:1
position: 1410291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1411315-1411527:1:exon

position:1411315:1
position: 1411315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411527:1
position: 1411527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1414454-1414556:1:exon

position:1414454:1
position: 1414454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414556:1
position: 1414556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1415983-1416907:1:exon

position:1415983:1
position: 1415983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273087
product: guanylate-binding protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180051.1
SIO_010081: LOC121273087
subclass of: SO_0000673
so part of: LOC121273087
location: join(1397489..1397847,1400506..1400631,1401531..1401798,1403477..1403604,1405654..1405763,1406941..1407128,1408705..1408947,1410011..1410291,1411315..1411527,1414454..1414556,1415983..1416907)
location: region:1397489-1416907:1
so has part: feature:1397489-1397847:1:exon
so has part: feature:1400506-1400631:1:exon
so has part: feature:1401531-1401798:1:exon
so has part: feature:1403477-1403604:1:exon
so has part: feature:1405654-1405763:1:exon
so has part: feature:1406941-1407128:1:exon
so has part: feature:1408705-1408947:1:exon
so has part: feature:1410011-1410291:1:exon
so has part: feature:1411315-1411527:1:exon
so has part: feature:1414454-1414556:1:exon
so has part: feature:1415983-1416907:1:exon

position:1397489:1
position: 1397489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397489-1397847:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1400506-1400631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1401531-1401798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1403477-1403604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1405654-1405763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1406941-1407128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408705-1408947:1:exon

position:1408705:1
position: 1408705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408947:1
position: 1408947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1410011-1410291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411315-1411527:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1414454-1414556:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1415983-1416907:1:exon

LOC121273087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 1-like isoform X1
translation: MIPLQLLFCLILGLSALEENLDHSSNTCSRGQGSAEICPPIAEISDKSLSDVPGPSSEMLTDEKMEVPVMEEIQMEEIKMEEPMTLVENVDGALRLNPDALNVLRSIERPVVVVAVVGAARTGKSYLLNRLAGSKKGFPLGSTVQSLTKGIWMWSLPHPQRADQSLILLDSEGLGDPEKGDEQNDNSVFALAILLSSVFVYNSQGTINQHAMSDLHFVTELAKRIQVKSQPDGSEAQNFVQFFPDFVWTLRDFTLDLNINGSVVTADQYLENSLRLRKEETKQDQSYNTLRRCIREYFPSRRCFGLVSPAPRKVLRQLQGLSDDQLDQEFVRDFRSFSEYIYTSGKVKKVLGGHQVTGKRLSQLAESYVEAIARGELPCVENGIARMAGSENEAAVQKALEYYDRKLVKLLPLPGHIVYQLTDLFTYYHNEAVRIFMKYSLMDKEAKHIRKLEELLQSRYESELSRIEVQSGVHCEEALSTAMASIRDNLDSGYYLRPGGYRDLEIHLEEGISKYNMGTVEEVKGAEVLEEFLTKMKPRLAEVQKVNSVLHDREEDVFDLKEELAKLREERWAQEQGRQEAKRAGEQDLLRQLKGKFEEERERAVAEQTEVIGHKLREGGRYRAEGAEEDSGRSDDERRRYERARDRTRDQTFWDYIYAVVGWLGRSLGLI
SIO_010081: LOC121273087
subclass of: SO_0000673
so part of: LOC121273087
location: join(1397833..1397847,1400506..1400631,1401531..1401798,1403477..1403604,1405654..1405763,1406941..1407128,1408705..1408947,1410011..1410291,1411315..1411527,1414454..1414556,1415983..1416323)
location: region:1397833-1416323:1
so has part: feature:1397833-1397847:1:exon
so has part: feature:1400506-1400631:1:exon
so has part: feature:1401531-1401798:1:exon
so has part: feature:1403477-1403604:1:exon
so has part: feature:1405654-1405763:1:exon
so has part: feature:1406941-1407128:1:exon
so has part: feature:1408705-1408947:1:exon
so has part: feature:1410011-1410291:1:exon
so has part: feature:1411315-1411527:1:exon
so has part: feature:1414454-1414556:1:exon
so has part: feature:1415983-1416323:1:exon

XP_041035985.1
type: Protein
SIO_000068: ncbiprotein

position:1397833:1
position: 1397833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416323:1
position: 1416323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397833-1397847:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1400506-1400631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1401531-1401798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1403477-1403604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1405654-1405763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1406941-1407128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408705-1408947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1410011-1410291:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1411315-1411527:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1414454-1414556:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1415983-1416323:1:exon

LOC121273087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 1-like isoform X2
translation: MIPLQLLFCLILGLSALEENLDHSSNTCSRGQGSAEICPPIAEISDKSLSDVPGPSSEMLTDEKMEVPVMEEIQMEEIKMEEPMTLVENVDGALRLNPDALNVLRSIERPVVVVAVVGAARTGKSYLLNRLAGSKKGFPLGSTVQSLTKGIWMWSLPHPQRADQSLILLDSEGLGDPEKGDEQNDNSVFALAILLSSVFVYNSQGTINQHAMSDLHFVTELAKRIQVKSQPDGSEAQNFVQFFPDFVWTLRDFTLDLNINGSVVTADQYLENSLRLRKGLSQLAESYVEAIARGELPCVENGIARMAGSENEAAVQKALEYYDRKLVKLLPLPGHIVYQLTDLFTYYHNEAVRIFMKYSLMDKEAKHIRKLEELLQSRYESELSRIEVQSGVHCEEALSTAMASIRDNLDSGYYLRPGGYRDLEIHLEEGISKYNMGTVEEVKGAEVLEEFLTKMKPRLAEVQKVNSVLHDREEDVFDLKEELAKLREERWAQEQGRQEAKRAGEQDLLRQLKGKFEEERERAVAEQTEVIGHKLREGGRYRAEGAEEDSGRSDDERRRYERARDRTRDQTFWDYIYAVVGWLGRSLGLI
SIO_010081: LOC121273087
subclass of: SO_0000673
so part of: LOC121273087
location: join(1397833..1397847,1400506..1400631,1401531..1401798,1403477..1403604,1405654..1405763,1406941..1407128,1410011..1410291,1411315..1411527,1414454..1414556,1415983..1416323)
location: region:1397833-1416323:1
so has part: feature:1397833-1397847:1:exon
so has part: feature:1400506-1400631:1:exon
so has part: feature:1401531-1401798:1:exon
so has part: feature:1403477-1403604:1:exon
so has part: feature:1405654-1405763:1:exon
so has part: feature:1406941-1407128:1:exon
so has part: feature:1410011-1410291:1:exon
so has part: feature:1411315-1411527:1:exon
so has part: feature:1414454-1414556:1:exon
so has part: feature:1415983-1416323:1:exon

XP_041035986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1397833-1397847:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1400506-1400631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1401531-1401798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1403477-1403604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1405654-1405763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1406941-1407128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1410011-1410291:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1411315-1411527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1414454-1414556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1415983-1416323:1:exon

LOC121273059
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1450967..1453023)
location: region:1450967-1453023:-1
so has part: feature:1450967-1453023:-1:exon

121273059
type: Gene
SIO_000068: ncbigene

position:1450967:-1
position: 1450967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453023:-1
position: 1453023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450967-1453023:-1:exon

LOC121273059
type: Exon
subclass of: SO_0000147
RO_0002162: 13397
gene: LOC121273059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC121273059
subclass of: SO_0000673
so part of: LOC121273059
location: complement(1450967..1452556)
location: region:1450967-1452556:-1
so has part: feature:1450967-1452556:-1:exon

position:1452556:-1
position: 1452556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450967-1452556:-1:exon

LOC121273059
type: Exon
subclass of: SO_0000147
RO_0002162: 13397
gene: LOC121273059
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC121273059
subclass of: SO_0000673
so part of: LOC121273059
location: complement(1452597..1453023)
location: region:1452597-1453023:-1
so has part: feature:1452597-1453023:-1:exon

position:1452597:-1
position: 1452597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452597-1453023:-1:exon

LOC121273060
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1457652..1494426)
location: region:1457652-1494426:-1
so has part: feature:1457652-1494426:-1:exon
subclass of: SO_0000010

121273060
type: Gene
SIO_000068: ncbigene

position:1457652:-1
position: 1457652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494426:-1
position: 1494426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457652-1494426:-1:exon

LOC121273060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273060
product: claudin-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180012.1
SIO_010081: LOC121273060
subclass of: SO_0000673
so part of: LOC121273060
location: complement(join(1457652..1458332,1481936..1482105,1494372..1494426))
location: region:1457652-1494426:-1
so has part: feature:1494372-1494426:-1:exon
so has part: feature:1481936-1482105:-1:exon
so has part: feature:1457652-1458332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1494372-1494426:-1:exon

position:1494372:-1
position: 1494372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1481936-1482105:-1:exon

position:1481936:-1
position: 1481936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482105:-1
position: 1482105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1457652-1458332:-1:exon

position:1458332:-1
position: 1458332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4-like
translation: MTQGELRGGRPVANEASREGASRRRTGELGLALESGPANGEKSQGKSRSAFSHSKIPMGVRGDGFRRRAGSACWRVPRSEAPDGGALASVGVCLQLVGLVLSLLGWLASGACCALPLWKITVFSGQTLMIKQKMTEGLWVSCILPGPGKANCRAFSSSGKEVTLDVQIGRILTLTTVTMAFLGLCVNCLGTRCISCVPRQGVKSRLLTASGVVFIVAGTAQLLAVTWPAYVLATDFHHPLVSEVLHISIGPCIYIGWAAGALLLMGGCLLGCPCCRRCRRPDYDGQYPAGRASDGAARNFV
SIO_010081: LOC121273060
subclass of: SO_0000673
so part of: LOC121273060
location: complement(join(1457652..1458332,1481936..1482105,1494372..1494426))
location: region:1457652-1494426:-1
so has part: feature:1494372-1494426:-1:exon
so has part: feature:1481936-1482105:-1:exon
so has part: feature:1457652-1458332:-1:exon

XP_041035946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1494372-1494426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481936-1482105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1457652-1458332:-1:exon

LOC121273086
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1650862..1653818
location: region:1650862-1653818:1
so has part: feature:1650862-1653818:1:exon
subclass of: SO_0000010

121273086
type: Gene
SIO_000068: ncbigene

position:1650862:1
position: 1650862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653818:1
position: 1653818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1650862-1653818:1:exon

LOC121273086
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273086
product: claudin-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041180049.1
SIO_010081: LOC121273086
subclass of: SO_0000673
so part of: LOC121273086
location: join(1650862..1651458,1653092..1653818)
location: region:1650862-1653818:1
so has part: feature:1650862-1651458:1:exon
so has part: feature:1653092-1653818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1650862-1651458:1:exon

position:1651458:1
position: 1651458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1653092-1653818:1:exon

position:1653092:1
position: 1653092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273086
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4-like
translation: MCGDKTAWKTPRILGMLLALLGWLGAIASCALPPWRVSSPPPVSGAAPPLWEGLWMSCSSNGTSARRCLAYDSLLDLPQDLQAARALTLIAAGLGLLATLAGAAGAPCCRAGGDPRCRGNLSVSAGFAFLACGLLMLLTAGWSTHAVRQDFSDPLVTLDAKRQPGASIFLAFAAGGAQLLGGLLLCFSWPREAELYPANFHNASSTARKSGRAAV
SIO_010081: LOC121273086
subclass of: SO_0000673
so part of: LOC121273086
location: 1653095..1653742
location: region:1653095-1653742:1
so has part: feature:1653095-1653742:1:exon

XP_041035983.1
type: Protein
SIO_000068: ncbiprotein

position:1653095:1
position: 1653095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653742:1
position: 1653742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1653095-1653742:1:exon

LOC121273061
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273061
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1793059..1833863
location: region:1793059-1833863:1
so has part: feature:1793059-1833863:1:exon
subclass of: SO_0000010

121273061
type: Gene
SIO_000068: ncbigene

position:1793059:1
position: 1793059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833863:1
position: 1833863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1793059-1833863:1:exon

LOC121273061
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273061
product: kremen protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041180013.1
SIO_010081: LOC121273061
subclass of: SO_0000673
so part of: LOC121273061
location: join(1793059..1793372,1799408..1799499,1800288..1800412,1802021..1802174,1828961..1829293,1831443..1831568,1833384..1833456,1833569..1833863)
location: region:1793059-1833863:1
so has part: feature:1793059-1793372:1:exon
so has part: feature:1799408-1799499:1:exon
so has part: feature:1800288-1800412:1:exon
so has part: feature:1802021-1802174:1:exon
so has part: feature:1828961-1829293:1:exon
so has part: feature:1831443-1831568:1:exon
so has part: feature:1833384-1833456:1:exon
so has part: feature:1833569-1833863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1793059-1793372:1:exon

position:1793372:1
position: 1793372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1799408-1799499:1:exon

position:1799408:1
position: 1799408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1799499:1
position: 1799499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1800288-1800412:1:exon

position:1800288:1
position: 1800288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800412:1
position: 1800412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1802021-1802174:1:exon

position:1802021:1
position: 1802021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802174:1
position: 1802174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1828961-1829293:1:exon

position:1828961:1
position: 1828961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829293:1
position: 1829293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1831443-1831568:1:exon

position:1831443:1
position: 1831443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831568:1
position: 1831568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1833384-1833456:1:exon

position:1833384:1
position: 1833384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833456:1
position: 1833456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1833569-1833863:1:exon

position:1833569:1
position: 1833569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273061
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273061
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kremen protein 2-like
translation: MITGAGGTRVRAPRSCGAGGGGWGCGGEKEESRNDDDGTQFRLCSLLETSECFRVNGADYRGRQDRTAPVNGRPCLYWNQTRQHTYNTLKYPNGQWGLGNHNYCRNPDGDVQPWCYVSENEEGIYWKYCNIPSCSMPGYVGCFSDSGNPPALAGSSGTSTKLTVQVCIHFCRKKSYKFAGVEAGYACFCGNTVDLSTRERVSAVECDQVCFGKSSELCGGDGRIGIYDVSVGACEGNVTGASGVVYSPNFPDNYGADSNCTWNVRPQGAGSIRLDFRLFEVRDGNDRLELRDGYSQRVLASFDGQRHPPQRLIFHTDFLTVHFLSDEIVHAQGFALLFTGLRYNSSQAEEVRGTASFSQFYPTAADRLNSSYSTGKATTIAAWVMYTAAGVFAAVAIGILYHLRKRSCLYVPRKTTSGVLVIRRLRERCQCPPGEAWSVVYKHTRVVICSESGARDHHREYVCISQGYNNLSATNQSSLKSLISSS
SIO_010081: LOC121273061
subclass of: SO_0000673
so part of: LOC121273061
location: join(1793059..1793372,1799408..1799499,1800288..1800412,1802021..1802174,1828961..1829293,1831443..1831568,1833384..1833456,1833569..1833812)
location: region:1793059-1833812:1
so has part: feature:1793059-1793372:1:exon
so has part: feature:1799408-1799499:1:exon
so has part: feature:1800288-1800412:1:exon
so has part: feature:1802021-1802174:1:exon
so has part: feature:1828961-1829293:1:exon
so has part: feature:1831443-1831568:1:exon
so has part: feature:1833384-1833456:1:exon
so has part: feature:1833569-1833812:1:exon

XP_041035947.1
type: Protein
SIO_000068: ncbiprotein

position:1833812:1
position: 1833812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1793059-1793372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1799408-1799499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800288-1800412:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1802021-1802174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1828961-1829293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1831443-1831568:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1833384-1833456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1833569-1833812:1:exon

sez6l2
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: sez6l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1936060..2028543
location: region:1936060-2028543:1
so has part: feature:1936060-2028543:1:exon
subclass of: SO_0000010

121273062
type: Gene
SIO_000068: ncbigene

position:1936060:1
position: 1936060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028543:1
position: 2028543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1936060-2028543:1:exon

sez6l2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: sez6l2
product: seizure related 6 homolog (mouse)-like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
transcript id: XM_041180014.1
SIO_010081: sez6l2
subclass of: SO_0000673
so part of: sez6l2
location: join(1936060..1936072,1939502..1939708,1941089..1941343,1945367..1945500,1950633..1950825,1959893..1960078,2011874..2012042,2014759..2014922,2017277..2017471,2018838..2018976,2021935..2022131,2024606..2024800,2026791..2026986,2027142..2027244,2028514..2028543)
location: region:1936060-2028543:1
so has part: feature:1936060-1936072:1:exon
so has part: feature:1939502-1939708:1:exon
so has part: feature:1941089-1941343:1:exon
so has part: feature:1945367-1945500:1:exon
so has part: feature:1950633-1950825:1:exon
so has part: feature:1959893-1960078:1:exon
so has part: feature:2011874-2012042:1:exon
so has part: feature:2014759-2014922:1:exon
so has part: feature:2017277-2017471:1:exon
so has part: feature:2018838-2018976:1:exon
so has part: feature:2021935-2022131:1:exon
so has part: feature:2024606-2024800:1:exon
so has part: feature:2026791-2026986:1:exon
so has part: feature:2027142-2027244:1:exon
so has part: feature:2028514-2028543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1936060-1936072:1:exon

position:1936072:1
position: 1936072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1939502-1939708:1:exon

position:1939502:1
position: 1939502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1939708:1
position: 1939708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1941089-1941343:1:exon

position:1941089:1
position: 1941089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1941343:1
position: 1941343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1945367-1945500:1:exon

position:1945367:1
position: 1945367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1945500:1
position: 1945500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1950633-1950825:1:exon

position:1950633:1
position: 1950633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1950825:1
position: 1950825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1959893-1960078:1:exon

position:1959893:1
position: 1959893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1960078:1
position: 1960078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2011874-2012042:1:exon

position:2011874:1
position: 2011874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2012042:1
position: 2012042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2014759-2014922:1:exon

position:2014759:1
position: 2014759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2014922:1
position: 2014922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2017277-2017471:1:exon

position:2017277:1
position: 2017277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2017471:1
position: 2017471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2018838-2018976:1:exon

position:2018838:1
position: 2018838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2018976:1
position: 2018976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2021935-2022131:1:exon

position:2021935:1
position: 2021935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022131:1
position: 2022131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2024606-2024800:1:exon

position:2024606:1
position: 2024606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024800:1
position: 2024800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2026791-2026986:1:exon

position:2026791:1
position: 2026791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026986:1
position: 2026986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2027142-2027244:1:exon

position:2027142:1
position: 2027142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2027244:1
position: 2027244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2028514-2028543:1:exon

position:2028514:1
position: 2028514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

sez6l2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: sez6l2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: seizure protein 6 homolog
translation: MRKTGLWTVTWTLPNTSESYSPSSDPARGLGSSEVPGRTWNVPDVIPTPAPIERLLHGALLTKSFADDQRYFSGTVLSPTSSPPLHRRLPGNTSPGPAETVTTAAVTPAPEKSRQPVSPAARGQGSPGSPEATPPAELDEETTTTLITTTTVTTVQTPVFCNLNMIEVDGLIESLEYSGSPFYSGLDCTYIISVYTGYAVELQVKTLNLLEGELLTVEGLQGDEPLILANEALMSEGQVIRSQTRQILIHFQSSQSAYTGIFRFHCQAYLLSCGFPVRPPYGDVWVSDLYPGGRAEFRCDPGFELQGTASLTCLNLTTPQWSSSAPQCTAVCGATIPNATVGHILSPDYSRNHGSNLTCHWLIEAPNGQRLHLHFERLSLDEDNDRLIIRSGNFPGAPIAFHSDIDDVPERGVVSDSQDLFIELVSENSGVPLVLALRYEAFETDHCYEPFLVHGNFSSSDATYSVGTRVVFSCNPGYALEQGSAMIECVDLEEPHWNQTEPVCRATCGGDMSESSGVIFSPEWPEVYGRNQDCVWCLHVPVDKRILIEIEILNIRRNDILSIFDGPNLNSRILGQYMGSQKHFRLFSTSSDITIQFQSDVSDPVSGENHGFIIHFTETLRNDTCPSLGAIENGWRTVSHSNLIRGTVVTYQCEPGYDIVGSEILMCQWDLSWSNPPPSCRKTLFCPDPGEVRNGLRLTPGVRFPVGSRVQYVCEEGHSMEGNGTLVCSSRNSLSPKWSEWPPKCVCRFQGKSFFRLPLSNSHSYSPITVESDFNNPLYEAGDTREYEVSI
SIO_010081: sez6l2
subclass of: SO_0000673
so part of: sez6l2
location: join(1936060..1936072,1939502..1939708,1941089..1941343,1945367..1945500,1950633..1950825,1959893..1960078,2011874..2012042,2014759..2014922,2017277..2017471,2018838..2018976,2021935..2022131,2024606..2024800,2026791..2026986,2027142..2027244,2028514..2028543)
location: region:1936060-2028543:1
so has part: feature:1936060-1936072:1:exon
so has part: feature:1939502-1939708:1:exon
so has part: feature:1941089-1941343:1:exon
so has part: feature:1945367-1945500:1:exon
so has part: feature:1950633-1950825:1:exon
so has part: feature:1959893-1960078:1:exon
so has part: feature:2011874-2012042:1:exon
so has part: feature:2014759-2014922:1:exon
so has part: feature:2017277-2017471:1:exon
so has part: feature:2018838-2018976:1:exon
so has part: feature:2021935-2022131:1:exon
so has part: feature:2024606-2024800:1:exon
so has part: feature:2026791-2026986:1:exon
so has part: feature:2027142-2027244:1:exon
so has part: feature:2028514-2028543:1:exon

XP_041035948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1936060-1936072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1939502-1939708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1941089-1941343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1945367-1945500:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1950633-1950825:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1959893-1960078:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2011874-2012042:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2014759-2014922:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2017277-2017471:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2018838-2018976:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2021935-2022131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2024606-2024800:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2026791-2026986:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2027142-2027244:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2028514-2028543:1:exon

LOC121273083
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2091419..2092105
location: region:2091419-2092105:1
so has part: feature:2091419-2092105:1:exon
subclass of: SO_0000010

121273083
type: Gene
SIO_000068: ncbigene

position:2091419:1
position: 2091419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2092105:1
position: 2092105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2091419-2092105:1:exon

LOC121273083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273083
product: dual specificity protein phosphatase 14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins
transcript id: XM_041180044.1
SIO_010081: LOC121273083
subclass of: SO_0000673
so part of: LOC121273083
location: join(2091419..2091474,2091550..2092105)
location: region:2091419-2092105:1
so has part: feature:2091419-2091474:1:exon
so has part: feature:2091550-2092105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2091419-2091474:1:exon

position:2091474:1
position: 2091474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2091550-2092105:1:exon

position:2091550:1
position: 2091550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 14-like
translation: MSYHGNGYYRRSPPPPPPPPPGVGMAGLGGIAQLTPALFLSGGAAATSRHAVYARGITCIVNATLEISSPRWPDVEYLKVPLPDLPHAPLSLYFDTVADKVQQVSRKNGRVLVHCVAGVSRSATLCIAYLMKHHKQSLREAHSWVRSRRPVVRPNHGFWRQLIDYEKRLFGKNTVRMVPSPVGMVPDLYEKETRGLMPYWTFR
SIO_010081: LOC121273083
subclass of: SO_0000673
so part of: LOC121273083
location: join(2091419..2091474,2091550..2092105)
location: region:2091419-2092105:1
so has part: feature:2091419-2091474:1:exon
so has part: feature:2091550-2092105:1:exon

XP_041035978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2091419-2091474:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2091550-2092105:1:exon

LOC121273063
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<2101662..>2112391)
location: region:2101662-2112391:-1
so has part: feature:2101662-2112391:-1:exon
subclass of: SO_0000010

121273063
type: Gene
SIO_000068: ncbigene

position:2101662:-1
position: 2101662
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2112391:-1
position: 2112391
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2101662-2112391:-1:exon

LOC121273063
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273063
product: putative nuclear pore complex-interacting protein family member B2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041180015.1
SIO_010081: LOC121273063
subclass of: SO_0000673
so part of: LOC121273063
location: complement(join(<2101662..2101675,2107782..2107803,2108197..2108213,2112370..>2112391))
location: region:2101662-2112391:-1
so has part: feature:2112370-2112391:-1:exon
so has part: feature:2108197-2108213:-1:exon
so has part: feature:2107782-2107803:-1:exon
so has part: feature:2101662-2101675:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2112370-2112391:-1:exon

position:2112370:-1
position: 2112370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2108197-2108213:-1:exon

position:2108197:-1
position: 2108197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2108213:-1
position: 2108213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2107782-2107803:-1:exon

position:2107782:-1
position: 2107782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2107803:-1
position: 2107803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2101662-2101675:-1:exon

position:2101675:-1
position: 2101675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273063
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative nuclear pore complex-interacting protein family member B2
translation: PSPPSCLLTPLPPPSPPSCLLTPLP
SIO_010081: LOC121273063
subclass of: SO_0000673
so part of: LOC121273063
location: complement(join(<2101662..2101675,2107782..2107803,2108197..2108213,2112370..>2112391))
location: region:2101662-2112391:-1
so has part: feature:2112370-2112391:-1:exon
so has part: feature:2108197-2108213:-1:exon
so has part: feature:2107782-2107803:-1:exon
so has part: feature:2101662-2101675:-1:exon

XP_041035949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2112370-2112391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2108197-2108213:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2107782-2107803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2101662-2101675:-1:exon

hirip3
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: hirip3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2155701..2220385)
location: region:2155701-2220385:-1
so has part: feature:2155701-2220385:-1:exon
subclass of: SO_0000010

121273064
type: Gene
SIO_000068: ncbigene

position:2155701:-1
position: 2155701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2220385:-1
position: 2220385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2155701-2220385:-1:exon

hirip3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: hirip3
product: HIRA interacting protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180016.1
SIO_010081: hirip3
subclass of: SO_0000673
so part of: hirip3
location: complement(join(2155701..2156003,2159851..2159949,2165944..2166121,2167079..2169315,2172465..2172657,2173502..2173622,2174286..2174374,2213462..2213541,2220133..2220385))
location: region:2155701-2220385:-1
so has part: feature:2220133-2220385:-1:exon
so has part: feature:2213462-2213541:-1:exon
so has part: feature:2174286-2174374:-1:exon
so has part: feature:2173502-2173622:-1:exon
so has part: feature:2172465-2172657:-1:exon
so has part: feature:2167079-2169315:-1:exon
so has part: feature:2165944-2166121:-1:exon
so has part: feature:2159851-2159949:-1:exon
so has part: feature:2155701-2156003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2220133-2220385:-1:exon

position:2220133:-1
position: 2220133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2213462-2213541:-1:exon

position:2213462:-1
position: 2213462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2213541:-1
position: 2213541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2174286-2174374:-1:exon

position:2174286:-1
position: 2174286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2174374:-1
position: 2174374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2173502-2173622:-1:exon

position:2173502:-1
position: 2173502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2173622:-1
position: 2173622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2172465-2172657:-1:exon

position:2172465:-1
position: 2172465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2172657:-1
position: 2172657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2167079-2169315:-1:exon

position:2167079:-1
position: 2167079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169315:-1
position: 2169315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2165944-2166121:-1:exon

position:2165944:-1
position: 2165944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2166121:-1
position: 2166121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2159851-2159949:-1:exon

position:2159851:-1
position: 2159851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2159949:-1
position: 2159949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2155701-2156003:-1:exon

position:2156003:-1
position: 2156003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

hirip3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: hirip3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HIRA-interacting protein 3
translation: MTLRKTEKRTVTIQEHMAINVSPGPIQPIPQISNYFPRLTLPIPPQERGGGQGATGRQTPSPSSGGNSRAEEVADLDSYDSDDSTTLGTLEFDLLYKSTEQALDCCIVRAKFRVQFRAPHFGKDVDALGEGAEETYQNVSRDLTHSIVKVKYQQHVKKDSLTKEEKLGLKRAVERALLAYQASDSSDDEPLSKKAELLRKQRSREQASGKRSRCSSGSDGDANGSPSSACRPQQGKRRRPGSPGSDLDRRSSGSPRSRSGDAEQNETAPRRSASEGDEELGSPRAEEPEDGGDRATAGPSQGVKTHCDATTGPESEGAGDERGLARLTERGPSRKAKAGEPAKLRPTPASEESGEGEARRGAAQGSKRGGAQTKQGKEEGAPGDASQSGSDSSRGDRASAKGRAKAAAEVRKGKSVRESRRKGDCRQKPKAPDDGSSQSKDEESGKSESEEGDRGSTKGRAKAAAEVRKGKSVRESRRKGDCRQKPKAPDDGSSQSEDEESRASEEGDRGSTKGRAKAGAEVRKGKSVQESRRKGDCRQKPKIPDDGSSQSEDKESDASESEEGDGTSAKGRTKAGAEVRKGKSVQETRRKGDCRQKPKVPDDGSPRSEDEESGKSESEEGDRGSTKGRTKTGAEVRKGKSVQESRRKGNCRQKPKVPDDGSSQSEDEESGKSESEEGDRTSTKGRTKAGAEVRKGKSVQESRRKGDCRQKPKVPDDGSSQSEDEESGASESEEGDRMSTKGRTKAGAEVRKGKSIQESRRKGDCRQKPKVPDDCSSQSEDEESGKSESEEGDRGSKKGRTKTGAEVRKGKSVQESRRKGDCRQDSDGRSSGSEEGGDAETQAQRRKRAEGKQDGRRKASGRRRASAARRPGGESPASGREESGEEGRGRSGAKARPRGRKSQPPAPRPSESEEGSLSEGKGASGKAASGQTGREHSGDESSDSGKSSSTGGEQKAESRAGSKGTTSSESEGDGGNVSPDAARKHHKKRPKGKVNEKESGKEEHPTIKRLKRCIITCGAHRNYKKLFENCRSNKAKIRVLRQELEDLGIQGNPSLEKCKVLRIKREEASELASLDVANIIHTEGRPRRHRGSAWDVDPAARGSYKRTLGSDSEDEPPKKLTAWSNLKGLISDDADSD
SIO_010081: hirip3
subclass of: SO_0000673
so part of: hirip3
location: complement(join(2155840..2156003,2159851..2159949,2165944..2166121,2167079..2169315,2172465..2172657,2173502..2173622,2174286..2174374,2213462..2213541,2220133..2220385))
location: region:2155840-2220385:-1
so has part: feature:2220133-2220385:-1:exon
so has part: feature:2213462-2213541:-1:exon
so has part: feature:2174286-2174374:-1:exon
so has part: feature:2173502-2173622:-1:exon
so has part: feature:2172465-2172657:-1:exon
so has part: feature:2167079-2169315:-1:exon
so has part: feature:2165944-2166121:-1:exon
so has part: feature:2159851-2159949:-1:exon
so has part: feature:2155840-2156003:-1:exon

XP_041035950.1
type: Protein
SIO_000068: ncbiprotein

position:2155840:-1
position: 2155840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2220133-2220385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2213462-2213541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2174286-2174374:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2173502-2173622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2172465-2172657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2167079-2169315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2165944-2166121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2159851-2159949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2155840-2156003:-1:exon

LOC121273065
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2220384..2222488
location: region:2220384-2222488:1
so has part: feature:2220384-2222488:1:exon
subclass of: SO_0000010

121273065
type: Gene
SIO_000068: ncbigene

position:2220384:1
position: 2220384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2222488:1
position: 2222488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2220384-2222488:1:exon

LOC121273065
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273065
product: serine/arginine repetitive matrix protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041180018.1
SIO_010081: LOC121273065
subclass of: SO_0000673
so part of: LOC121273065
location: join(2220384..2220668,2220719..2222488)
location: region:2220384-2222488:1
so has part: feature:2220384-2220668:1:exon
so has part: feature:2220719-2222488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2220384-2220668:1:exon

position:2220668:1
position: 2220668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2220719-2222488:1:exon

position:2220719:1
position: 2220719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 2-like
translation: MQAAEQGAEPEQSRSGSRAEPESNRSRTGAEPEPSRSRTGAEPEPSRSQAGAEPEPSRSRTGAEPEPSRSRTGAEPEPSRSRAGAEPELNRSRTGPEPNRSRTGAEPEPSRSRTGAEPEPSRSRAGAEPELNQSRTGAEPEPNRSRAGAEPEPSRSRTGAEPELNRSRAGAEPEPNRSRAGAEPEPSRSRTGAEPEPNRSRTGAEPEPNRSRAGAEPEPNRSRAGAEPEPNRSGAGAEPELNWGGAGAEPEQSRSRARAEPEPNRSGAGAEPEPNRSGAGAEPERSRSGAGAEPEPNRSRTGAEPERNRSRAGAEPERSRSRTGAEPERSRSGTGAEPEPNRSRTGAEPEPNRSRTGAEPEPNRSRAGAEPERSRSRTGAEPEPNRSRAGAEPEPNRSRTGAEPEPSRSRTGAEPEPNRSRTGAKPEPSRSRAGAEPERSRSRTGAEQEPNRSGAGAEPEPNRSRAGASRSRAGAEPERSRSRTGAGAELNRSRTGAEPEPSRSRTGAEPEPNRSRTGAEPEPNRSRTGAEPEPNRSGTGAEPEPNRSGAGAEPERSRSGSGAELGRSRSGAGAEPEWIRSRAGAEPEQNRKRRGVGVGVGWGEPERDPVCGAAVDPGRVRSRAGARNRRAVRRGTKTEAGGVGRGGWVEGGGGGLSVGNPKLKRSYCSSRIRSKEAAALSREK
SIO_010081: LOC121273065
subclass of: SO_0000673
so part of: LOC121273065
location: join(2220384..2220668,2220719..2222488)
location: region:2220384-2222488:1
so has part: feature:2220384-2220668:1:exon
so has part: feature:2220719-2222488:1:exon

XP_041035952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2220384-2220668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2220719-2222488:1:exon

LOC121273080
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2271517..2310126
location: region:2271517-2310126:1
so has part: feature:2271517-2310126:1:exon
subclass of: SO_0000010

121273080
type: Gene
SIO_000068: ncbigene

position:2271517:1
position: 2271517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2310126:1
position: 2310126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2271517-2310126:1:exon

LOC121273080
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273080
product: serine/threonine-protein kinase NLK2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041180040.1
SIO_010081: LOC121273080
subclass of: SO_0000673
so part of: LOC121273080
location: join(2271517..2271837,2272505..2272634,2288676..2288731,2289747..2289853,2290061..2290146,2291174..2291383,2292608..2292709,2304848..2304910,2309777..2310126)
location: region:2271517-2310126:1
so has part: feature:2271517-2271837:1:exon
so has part: feature:2272505-2272634:1:exon
so has part: feature:2288676-2288731:1:exon
so has part: feature:2289747-2289853:1:exon
so has part: feature:2290061-2290146:1:exon
so has part: feature:2291174-2291383:1:exon
so has part: feature:2292608-2292709:1:exon
so has part: feature:2304848-2304910:1:exon
so has part: feature:2309777-2310126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2271517-2271837:1:exon

position:2271837:1
position: 2271837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2272505-2272634:1:exon

position:2272505:1
position: 2272505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2272634:1
position: 2272634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2288676-2288731:1:exon

position:2288676:1
position: 2288676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2288731:1
position: 2288731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2289747-2289853:1:exon

position:2289747:1
position: 2289747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2289853:1
position: 2289853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2290061-2290146:1:exon

position:2290061:1
position: 2290061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2290146:1
position: 2290146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2291174-2291383:1:exon

position:2291174:1
position: 2291174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2291383:1
position: 2291383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2292608-2292709:1:exon

position:2292608:1
position: 2292608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2292709:1
position: 2292709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2304848-2304910:1:exon

position:2304848:1
position: 2304848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2304910:1
position: 2304910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2309777-2310126:1:exon

position:2309777:1
position: 2309777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase NLK2-like
translation: MAFQDTAHHIARGICAAPTSQIARPEQKFDRVPPGLAASSPPPVEGVGGHQEQPVLQAVIPQAGESENEPELDRPIGYGAFGVVWSVTDPRDGKQVALKKMPNVFQNFISSKRVFRELKMLSFFKHSNVLSALDILQPPHIDYFEEIYVITELMQSDLHKVIVSPQTLSSDHIKVFLYQILRGLKYLHSAGVLHRDIKPGNLLVNSNCVLKICDFGLARLEEPDLSRHMTQEVVTQYYRAPEILMGSTHYDSSIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPPALAFHSACDGAKAHILRGRPKAVDSLAFLQGAQEGRAMNTRDWLLSQLSE
SIO_010081: LOC121273080
subclass of: SO_0000673
so part of: LOC121273080
location: join(2271584..2271837,2272505..2272634,2288676..2288731,2289747..2289853,2290061..2290146,2291174..2291383,2292608..2292709,2304848..2304910,2309777..2309800)
location: region:2271584-2309800:1
so has part: feature:2271584-2271837:1:exon
so has part: feature:2272505-2272634:1:exon
so has part: feature:2288676-2288731:1:exon
so has part: feature:2289747-2289853:1:exon
so has part: feature:2290061-2290146:1:exon
so has part: feature:2291174-2291383:1:exon
so has part: feature:2292608-2292709:1:exon
so has part: feature:2304848-2304910:1:exon
so has part: feature:2309777-2309800:1:exon

XP_041035974.1
type: Protein
SIO_000068: ncbiprotein

position:2271584:1
position: 2271584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2309800:1
position: 2309800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2271584-2271837:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2272505-2272634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2288676-2288731:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2289747-2289853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2290061-2290146:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2291174-2291383:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2292608-2292709:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2304848-2304910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2309777-2309800:1:exon

LOC121273046
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2322139..2428820
location: region:2322139-2428820:1
so has part: feature:2322139-2428820:1:exon
subclass of: SO_0000010

121273046
type: Gene
SIO_000068: ncbigene

position:2322139:1
position: 2322139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2428820:1
position: 2428820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2322139-2428820:1:exon

LOC121273046
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273046
product: BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041179996.1
SIO_010081: LOC121273046
subclass of: SO_0000673
so part of: LOC121273046
location: join(2322139..2322428,2322866..2323035,2420673..2420762,2421324..2421376,2424169..2424364,2428151..2428820)
location: region:2322139-2428820:1
so has part: feature:2322139-2322428:1:exon
so has part: feature:2322866-2323035:1:exon
so has part: feature:2420673-2420762:1:exon
so has part: feature:2421324-2421376:1:exon
so has part: feature:2424169-2424364:1:exon
so has part: feature:2428151-2428820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2322139-2322428:1:exon

position:2322428:1
position: 2322428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2322866-2323035:1:exon

position:2322866:1
position: 2322866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323035:1
position: 2323035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2420673-2420762:1:exon

position:2420673:1
position: 2420673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420762:1
position: 2420762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2421324-2421376:1:exon

position:2421324:1
position: 2421324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2421376:1
position: 2421376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2424169-2424364:1:exon

position:2424169:1
position: 2424169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2424364:1
position: 2424364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2428151-2428820:1:exon

position:2428151:1
position: 2428151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273046
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1-like
translation: MSGVSDAPGEGAEVPLLLVTSPADRKTLAPSGSSSSSKYVKFNVGGFLHYTTVQTLSKQETALKAMSDGNTEVLRDQEGWILVDRSGQHFGTLLNYLRDGSIPLPEAVREIKELLLEAKYYLIEGLVEDCQQALKRRIESCEAECRIPMITSAKEEQKIISASAKPVVKLVHNRSNNKYSYTSNSDDNLLKNIELFDKLALRFNGRILFAKDVLGDEICCWSFYGQGRKIAEICCTSIVYATEKKQTKVEFPEARIFEETLNTLMYESPRPPERALLEVTGSGGQQHSDDEDRRVRRERVRRIHVRRHITHDEGPHGQPAIFKD
SIO_010081: LOC121273046
subclass of: SO_0000673
so part of: LOC121273046
location: join(2322194..2322428,2322866..2323035,2420673..2420762,2421324..2421376,2424169..2424364,2428151..2428381)
location: region:2322194-2428381:1
so has part: feature:2322194-2322428:1:exon
so has part: feature:2322866-2323035:1:exon
so has part: feature:2420673-2420762:1:exon
so has part: feature:2421324-2421376:1:exon
so has part: feature:2424169-2424364:1:exon
so has part: feature:2428151-2428381:1:exon

XP_041035930.1
type: Protein
SIO_000068: ncbiprotein

position:2322194:1
position: 2322194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2428381:1
position: 2428381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2322194-2322428:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2322866-2323035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2420673-2420762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2421324-2421376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2424169-2424364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2428151-2428381:1:exon

sgf29
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: sgf29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2457481..2463780)
location: region:2457481-2463780:-1
so has part: feature:2457481-2463780:-1:exon
subclass of: SO_0000010

121273066
type: Gene
SIO_000068: ncbigene

position:2457481:-1
position: 2457481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463780:-1
position: 2463780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2457481-2463780:-1:exon

sgf29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: sgf29
product: SAGA complex associated factor 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180019.1
SIO_010081: sgf29
subclass of: SO_0000673
so part of: sgf29
location: complement(join(2457481..2457880,2459732..2459894,2460684..2460719,2461847..2461993,2463716..2463780))
location: region:2457481-2463780:-1
so has part: feature:2463716-2463780:-1:exon
so has part: feature:2461847-2461993:-1:exon
so has part: feature:2460684-2460719:-1:exon
so has part: feature:2459732-2459894:-1:exon
so has part: feature:2457481-2457880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2463716-2463780:-1:exon

position:2463716:-1
position: 2463716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2461847-2461993:-1:exon

position:2461847:-1
position: 2461847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2461993:-1
position: 2461993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2460684-2460719:-1:exon

position:2460684:-1
position: 2460684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2460719:-1
position: 2460719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2459732-2459894:-1:exon

position:2459732:-1
position: 2459732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2459894:-1
position: 2459894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2457481-2457880:-1:exon

position:2457880:-1
position: 2457880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

sgf29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: sgf29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAGA-associated factor 29
translation: MKNQREMPLDSIWPVAGALGIVPPPLCGAIPASSDYVAKPGDKVAARVKGLDGDEQWILAEVVSYSHTANKYEVDDIDEEGKERHTLSRRRIIPLPQWKANPETDPEALFQKDQLVLALYPQTTCFYRALIHTPPQRPQEDYSVLFEDTSYADGYSPPLNVAQRYVVACKETKKK
SIO_010081: sgf29
subclass of: SO_0000673
so part of: sgf29
location: complement(join(2457764..2457880,2459732..2459894,2460684..2460719,2461847..2461993,2463716..2463780))
location: region:2457764-2463780:-1
so has part: feature:2463716-2463780:-1:exon
so has part: feature:2461847-2461993:-1:exon
so has part: feature:2460684-2460719:-1:exon
so has part: feature:2459732-2459894:-1:exon
so has part: feature:2457764-2457880:-1:exon

XP_041035953.1
type: Protein
SIO_000068: ncbiprotein

position:2457764:-1
position: 2457764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2463716-2463780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2461847-2461993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2460684-2460719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2459732-2459894:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2457764-2457880:-1:exon

si:ch211-11k18.4
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: si:ch211-11k18.4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2471419..2507152
location: region:2471419-2507152:1
so has part: feature:2471419-2507152:1:exon
subclass of: SO_0000010

121273048
type: Gene
SIO_000068: ncbigene

position:2471419:1
position: 2471419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2507152:1
position: 2507152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2471419-2507152:1:exon

si:ch211-11k18.4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: si:ch211-11k18.4
product: uncharacterized si:ch211-11k18.4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041179999.1
SIO_010081: si:ch211-11k18.4
subclass of: SO_0000673
so part of: si:ch211-11k18.4
location: join(2471419..2471606,2481237..2481348,2483343..2483436,2488613..2488667,2489531..2489671,2495372..2495532,2499163..2499261,2500568..2500713,2501867..2502038,2503961..2504073,2504202..2504286,2506438..2507152)
location: region:2471419-2507152:1
so has part: feature:2471419-2471606:1:exon
so has part: feature:2481237-2481348:1:exon
so has part: feature:2483343-2483436:1:exon
so has part: feature:2488613-2488667:1:exon
so has part: feature:2489531-2489671:1:exon
so has part: feature:2495372-2495532:1:exon
so has part: feature:2499163-2499261:1:exon
so has part: feature:2500568-2500713:1:exon
so has part: feature:2501867-2502038:1:exon
so has part: feature:2503961-2504073:1:exon
so has part: feature:2504202-2504286:1:exon
so has part: feature:2506438-2507152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2471419-2471606:1:exon

position:2471606:1
position: 2471606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2481237-2481348:1:exon

position:2481237:1
position: 2481237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2481348:1
position: 2481348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2483343-2483436:1:exon

position:2483343:1
position: 2483343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483436:1
position: 2483436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2488613-2488667:1:exon

position:2488613:1
position: 2488613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2488667:1
position: 2488667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2489531-2489671:1:exon

position:2489531:1
position: 2489531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2489671:1
position: 2489671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2495372-2495532:1:exon

position:2495372:1
position: 2495372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495532:1
position: 2495532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2499163-2499261:1:exon

position:2499163:1
position: 2499163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2499261:1
position: 2499261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2500568-2500713:1:exon

position:2500568:1
position: 2500568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2500713:1
position: 2500713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2501867-2502038:1:exon

position:2501867:1
position: 2501867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2502038:1
position: 2502038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2503961-2504073:1:exon

position:2503961:1
position: 2503961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2504073:1
position: 2504073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2504202-2504286:1:exon

position:2504202:1
position: 2504202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2504286:1
position: 2504286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2506438-2507152:1:exon

position:2506438:1
position: 2506438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

si:ch211-11k18.4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: si:ch211-11k18.4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein si:ch211-11k18.4
translation: MAGKTMKPRSAANAERGAETVSERVLRECHRLYDHDAAGTGLIDIASKLDLHLLPPRKKINVMLMGNHSAGKSSFINWYVEEHIQRTGVAIETQGFTFVTSGRKRESLTGNATLHLYPHFKPLQQIEGVSEYLSTEISTSKQKKFSLVTFIDTPGLVDGDMKYPFDVDQAILWLGELCELVLVFFDPMGQALCKRTLNIVEKLNETQGEKIRFYLSKADEAGSECDRQRVMMQIVQELCKRPGLNKCGFDMPTIYIPHPNKPSRCVNQIEEVCRTIEKTISQTVQNTLNQLERDCELIHSTVDSRLQEDSLTSVRNRKAQSKGCVLGFLGLLVPAFLLVSLVLGNLSQEMISSLLGDNGTEMLQVYTSPVATFWSMVPSDLVCYVFLTLCVLSMLLIGIAKLSFRTCRTLTRKQKRQLLEQQEFVREVVKVKKRQLYTEYLRQSVGEHDMV
SIO_010081: si:ch211-11k18.4
subclass of: SO_0000673
so part of: si:ch211-11k18.4
location: join(2471486..2471606,2481237..2481348,2483343..2483436,2488613..2488667,2489531..2489671,2495372..2495532,2499163..2499261,2500568..2500713,2501867..2502038,2503961..2504073,2504202..2504286,2506438..2506494)
location: region:2471486-2506494:1
so has part: feature:2471486-2471606:1:exon
so has part: feature:2481237-2481348:1:exon
so has part: feature:2483343-2483436:1:exon
so has part: feature:2488613-2488667:1:exon
so has part: feature:2489531-2489671:1:exon
so has part: feature:2495372-2495532:1:exon
so has part: feature:2499163-2499261:1:exon
so has part: feature:2500568-2500713:1:exon
so has part: feature:2501867-2502038:1:exon
so has part: feature:2503961-2504073:1:exon
so has part: feature:2504202-2504286:1:exon
so has part: feature:2506438-2506494:1:exon

XP_041035933.1
type: Protein
SIO_000068: ncbiprotein

position:2471486:1
position: 2471486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506494:1
position: 2506494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2471486-2471606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2481237-2481348:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2483343-2483436:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2488613-2488667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2489531-2489671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2495372-2495532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2499163-2499261:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2500568-2500713:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2501867-2502038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2503961-2504073:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2504202-2504286:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2506438-2506494:1:exon

LOC121273067
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2529947..2530909)
location: region:2529947-2530909:-1
so has part: feature:2529947-2530909:-1:exon
subclass of: SO_0000010

121273067
type: Gene
SIO_000068: ncbigene

position:2529947:-1
position: 2529947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2530909:-1
position: 2530909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2529947-2530909:-1:exon

LOC121273067
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273067
product: tyrosinase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_041180020.1
SIO_010081: LOC121273067
subclass of: SO_0000673
so part of: LOC121273067
location: complement(2529947..2530909)
location: region:2529947-2530909:-1
so has part: feature:2529947-2530909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2529947-2530909:-1:exon

LOC121273067
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosinase-like
translation: MRVPLFLLLLLLLPPGGSAQFPRACAQLAALRSRTCCPVWEGDGSPCGERSGRGRCRASRGPGVGGRDFRLGWPTSFYGRTCACRGRFSGFDCGECRDGYRGSDCRRWVLTVRRGLHEMDRAQRRRLVDYLARAKATVSPRYVVLISRNASDVGSYRFRDASVYDVCTWVHYVAAKPISTRRRPNFAHMGPAFAVWHRRYLLFFEKEIRHLTSDEDFHLPYWDWTRAAACDICTDELMGANDEDGYLLPPSPFASWRVRSRPSTPPTKPQPRLPPKHKPLPDSAFPPYLPERPSLTAWRPQSTGPSPVAIEWNESQGWHP
SIO_010081: LOC121273067
subclass of: SO_0000673
so part of: LOC121273067
location: complement(2529947..2530909)
location: region:2529947-2530909:-1
so has part: feature:2529947-2530909:-1:exon

XP_041035954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2529947-2530909:-1:exon

LOC121273089
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2570309..2573587
location: region:2570309-2573587:1
so has part: feature:2570309-2573587:1:exon
subclass of: SO_0000010

121273089
type: Gene
SIO_000068: ncbigene

position:2570309:1
position: 2570309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2573587:1
position: 2573587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2570309-2573587:1:exon

LOC121273089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273089
product: claudin-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 151 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041180054.1
SIO_010081: LOC121273089
subclass of: SO_0000673
so part of: LOC121273089
location: join(2570309..2570464,2572449..2573587)
location: region:2570309-2573587:1
so has part: feature:2570309-2570464:1:exon
so has part: feature:2572449-2573587:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2570309-2570464:1:exon

position:2570464:1
position: 2570464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2572449-2573587:1:exon

position:2572449:1
position: 2572449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4-like
translation: MASSGLQGLGIALCVLGLIGAIVCCVVPKWNQSSHTGSSIVTAQTYQDGLWMSCVTQSTGQQQCKVYDSMLALSGELQTARALTVVCIALSILGLLASLLGANFTTCLGEEGAKGKAAAGAGGVLALAGLLLLVPVSWSAHVTIARFHNPALADKREIGACIWTGWGAAGLLLLGGGLLCCSWPRRGGGSSYAAKYINNPSAPARTHV
SIO_010081: LOC121273089
subclass of: SO_0000673
so part of: LOC121273089
location: 2572489..2573115
location: region:2572489-2573115:1
so has part: feature:2572489-2573115:1:exon

XP_041035988.1
type: Protein
SIO_000068: ncbiprotein

position:2572489:1
position: 2572489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2573115:1
position: 2573115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2572489-2573115:1:exon

LOC121273088
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2602109..2653703
location: region:2602109-2653703:1
so has part: feature:2602109-2653703:1:exon
subclass of: SO_0000010

121273088
type: Gene
SIO_000068: ncbigene

position:2602109:1
position: 2602109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2653703:1
position: 2653703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2602109-2653703:1:exon

LOC121273088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273088
product: coronin-1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041180053.1
SIO_010081: LOC121273088
subclass of: SO_0000673
so part of: LOC121273088
location: join(2602109..2602193,2612536..2612735,2624473..2624595,2625260..2625389,2630017..2630198,2638642..2638761,2642763..2642867,2644810..2644955,2645066..2645123,2647766..2647987,2653290..2653703)
location: region:2602109-2653703:1
so has part: feature:2602109-2602193:1:exon
so has part: feature:2612536-2612735:1:exon
so has part: feature:2624473-2624595:1:exon
so has part: feature:2625260-2625389:1:exon
so has part: feature:2630017-2630198:1:exon
so has part: feature:2638642-2638761:1:exon
so has part: feature:2642763-2642867:1:exon
so has part: feature:2644810-2644955:1:exon
so has part: feature:2645066-2645123:1:exon
so has part: feature:2647766-2647987:1:exon
so has part: feature:2653290-2653703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2602109-2602193:1:exon

position:2602193:1
position: 2602193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2612536-2612735:1:exon

position:2612536:1
position: 2612536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2612735:1
position: 2612735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2624473-2624595:1:exon

position:2624473:1
position: 2624473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2624595:1
position: 2624595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2625260-2625389:1:exon

position:2625260:1
position: 2625260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2625389:1
position: 2625389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2630017-2630198:1:exon

position:2630017:1
position: 2630017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2630198:1
position: 2630198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2638642-2638761:1:exon

position:2638642:1
position: 2638642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2638761:1
position: 2638761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2642763-2642867:1:exon

position:2642763:1
position: 2642763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2642867:1
position: 2642867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2644810-2644955:1:exon

position:2644810:1
position: 2644810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2644955:1
position: 2644955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2645066-2645123:1:exon

position:2645066:1
position: 2645066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2645123:1
position: 2645123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2647766-2647987:1:exon

position:2647766:1
position: 2647766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2647987:1
position: 2647987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2653290-2653703:1:exon

position:2653290:1
position: 2653290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coronin-1A-like
translation: MSRKVVRSSKYRHVFGQPMKSDQCYDDIRISQNTWDSNFCSVNPLYLAMIVEASGGGAFMVLPLSKCGRIDKAQPLVCGHTAVVLDIEWCPHNDHIIASGSEDCTVMIWEIPEGGLTRPITEPLVTLEGHSKRVGILSWHPTASNVLLSAGCDNVIIIWNVSTAEKVIVMDNLHPDIIYSACWNINGSKLLTSCKDKKLRVIEPRKKTVTLEKEKSHDGSRPVRAIFVAGDKILTTGFGKMSERQVALWDMKHMSEAMTLEELDVGSGVLIPFYDPDSNIVYLCGKGDSSIRYFEVTDEAPYVHYLSMYSSKESQRGIGYMPKRGLDVKKCEIARFYKLHERRCEPIAMTVPRKSDLFQEDLYPDTIGPEPALEAEEWFGGKDADPIYISLKNEYTVKSREFKVCKKVLDVKDGAHRAHATSNSGSHMLQAPAVESLIEEMEKLKVKVQEHEQRITELEGKA
SIO_010081: LOC121273088
subclass of: SO_0000673
so part of: LOC121273088
location: join(2612538..2612735,2624473..2624595,2625260..2625389,2630017..2630198,2638642..2638761,2642763..2642867,2644810..2644955,2645066..2645123,2647766..2647987,2653290..2653394)
location: region:2612538-2653394:1
so has part: feature:2612538-2612735:1:exon
so has part: feature:2624473-2624595:1:exon
so has part: feature:2625260-2625389:1:exon
so has part: feature:2630017-2630198:1:exon
so has part: feature:2638642-2638761:1:exon
so has part: feature:2642763-2642867:1:exon
so has part: feature:2644810-2644955:1:exon
so has part: feature:2645066-2645123:1:exon
so has part: feature:2647766-2647987:1:exon
so has part: feature:2653290-2653394:1:exon

XP_041035987.1
type: Protein
SIO_000068: ncbiprotein

position:2612538:1
position: 2612538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2653394:1
position: 2653394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2612538-2612735:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2624473-2624595:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2625260-2625389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2630017-2630198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2638642-2638761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2642763-2642867:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2644810-2644955:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2645066-2645123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2647766-2647987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2653290-2653394:1:exon

zgc:112271
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: zgc:112271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2659124..2668138)
location: region:2659124-2668138:-1
so has part: feature:2659124-2668138:-1:exon
subclass of: SO_0000010

121273084
type: Gene
SIO_000068: ncbigene

position:2659124:-1
position: 2659124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2668138:-1
position: 2668138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2659124-2668138:-1:exon

zgc:112271
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: zgc:112271
product: uncharacterized protein LOC553698 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180045.1
SIO_010081: zgc:112271
subclass of: SO_0000673
so part of: zgc:112271
location: complement(join(2659124..2659465,2664095..2664192,2666984..2667049,2668084..2668138))
location: region:2659124-2668138:-1
so has part: feature:2668084-2668138:-1:exon
so has part: feature:2666984-2667049:-1:exon
so has part: feature:2664095-2664192:-1:exon
so has part: feature:2659124-2659465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2668084-2668138:-1:exon

position:2668084:-1
position: 2668084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2666984-2667049:-1:exon

position:2666984:-1
position: 2666984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2667049:-1
position: 2667049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2664095-2664192:-1:exon

position:2664095:-1
position: 2664095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2664192:-1
position: 2664192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2659124-2659465:-1:exon

position:2659465:-1
position: 2659465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

zgc:112271
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: zgc:112271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bolA-like protein 2
translation: MEVTALTADLVRDKLLRGLEATHVEVVDMTAEKCSTSFKVLVVSPKFVNKPLLQRHRMVNACLADELKAIHAFEQKTLSPEQWEKQKAQ
SIO_010081: zgc:112271
subclass of: SO_0000673
so part of: zgc:112271
location: complement(join(2659366..2659465,2664095..2664192,2666984..2667049,2668084..2668089))
location: region:2659366-2668089:-1
so has part: feature:2668084-2668089:-1:exon
so has part: feature:2666984-2667049:-1:exon
so has part: feature:2664095-2664192:-1:exon
so has part: feature:2659366-2659465:-1:exon

XP_041035979.1
type: Protein
SIO_000068: ncbiprotein

position:2659366:-1
position: 2659366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2668089:-1
position: 2668089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2668084-2668089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2666984-2667049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2664095-2664192:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2659366-2659465:-1:exon

slx1b
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: slx1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2668195..2670972
location: region:2668195-2670972:1
so has part: feature:2668195-2670972:1:exon
subclass of: SO_0000010

121273068
type: Gene
SIO_000068: ncbigene

position:2668195:1
position: 2668195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2670972:1
position: 2670972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2668195-2670972:1:exon

slx1b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: slx1b
product: SLX1 homolog B, structure-specific endonuclease subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180021.1
SIO_010081: slx1b
subclass of: SO_0000673
so part of: slx1b
location: join(2668195..2668199,2668270..2668557,2670786..2670972)
location: region:2668195-2670972:1
so has part: feature:2668195-2668199:1:exon
so has part: feature:2668270-2668557:1:exon
so has part: feature:2670786-2670972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2668195-2668199:1:exon

position:2668199:1
position: 2668199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2668270-2668557:1:exon

position:2668270:1
position: 2668270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2668557:1
position: 2668557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2670786-2670972:1:exon

position:2670786:1
position: 2670786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

slx1b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: slx1b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: structure-specific endonuclease subunit SLX1
translation: MVGRGFPPHVAPASPPRTADGQEAPANGDARREGAGQSGEAGRDTTGGGWGGGPCAAWGCPAQRLTAARRLNRGFQGSDGAAPGRPAAPAGPPSSPSRGSAMVIEVESFHGVYLLYCTNAKYKGRIYIGYTVNPERRISQHNAGKRKGGAWRTSGRGPW
SIO_010081: slx1b
subclass of: SO_0000673
so part of: slx1b
location: join(2668195..2668199,2668270..2668557,2670786..2670972)
location: region:2668195-2670972:1
so has part: feature:2668195-2668199:1:exon
so has part: feature:2668270-2668557:1:exon
so has part: feature:2670786-2670972:1:exon

XP_041035955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2668195-2668199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2668270-2668557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2670786-2670972:1:exon

tufm
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: tufm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2678373..2701141)
location: region:2678373-2701141:-1
so has part: feature:2678373-2701141:-1:exon
subclass of: SO_0000010

121273075
type: Gene
SIO_000068: ncbigene

position:2678373:-1
position: 2678373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2701141:-1
position: 2701141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2678373-2701141:-1:exon

tufm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: tufm
product: Tu translation elongation factor, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041180034.1
SIO_010081: tufm
subclass of: SO_0000673
so part of: tufm
location: complement(join(2678373..2678804,2681510..2681629,2682662..2682813,2683643..2683747,2683929..2684061,2685299..2685403,2686634..2686800,2696531..2696690,2697357..2697397,2701030..2701141))
location: region:2678373-2701141:-1
so has part: feature:2701030-2701141:-1:exon
so has part: feature:2697357-2697397:-1:exon
so has part: feature:2696531-2696690:-1:exon
so has part: feature:2686634-2686800:-1:exon
so has part: feature:2685299-2685403:-1:exon
so has part: feature:2683929-2684061:-1:exon
so has part: feature:2683643-2683747:-1:exon
so has part: feature:2682662-2682813:-1:exon
so has part: feature:2681510-2681629:-1:exon
so has part: feature:2678373-2678804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2701030-2701141:-1:exon

position:2701030:-1
position: 2701030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2697357-2697397:-1:exon

position:2697357:-1
position: 2697357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697397:-1
position: 2697397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2696531-2696690:-1:exon

position:2696531:-1
position: 2696531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2696690:-1
position: 2696690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2686634-2686800:-1:exon

position:2686634:-1
position: 2686634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2686800:-1
position: 2686800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2685299-2685403:-1:exon

position:2685299:-1
position: 2685299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2685403:-1
position: 2685403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2683929-2684061:-1:exon

position:2683929:-1
position: 2683929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2684061:-1
position: 2684061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2683643-2683747:-1:exon

position:2683643:-1
position: 2683643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2683747:-1
position: 2683747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2682662-2682813:-1:exon

position:2682662:-1
position: 2682662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2682813:-1
position: 2682813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2681510-2681629:-1:exon

position:2681510:-1
position: 2681510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2681629:-1
position: 2681629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2678373-2678804:-1:exon

position:2678804:-1
position: 2678804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tufm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: tufm
product: Tu translation elongation factor, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041180033.1
SIO_010081: tufm
subclass of: SO_0000673
so part of: tufm
location: complement(join(2678373..2678804,2681510..2681629,2682662..2682813,2683643..2683747,2683929..2684061,2684409..2684573,2685299..2685403,2686634..2686800,2696531..2696690,2697357..2697397,2701030..2701141))
location: region:2678373-2701141:-1
so has part: feature:2701030-2701141:-1:exon
so has part: feature:2697357-2697397:-1:exon
so has part: feature:2696531-2696690:-1:exon
so has part: feature:2686634-2686800:-1:exon
so has part: feature:2685299-2685403:-1:exon
so has part: feature:2684409-2684573:-1:exon
so has part: feature:2683929-2684061:-1:exon
so has part: feature:2683643-2683747:-1:exon
so has part: feature:2682662-2682813:-1:exon
so has part: feature:2681510-2681629:-1:exon
so has part: feature:2678373-2678804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2701030-2701141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2697357-2697397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2696531-2696690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2686634-2686800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2685299-2685403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2684409-2684573:-1:exon

position:2684409:-1
position: 2684409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2684573:-1
position: 2684573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2683929-2684061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2683643-2683747:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2682662-2682813:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2681510-2681629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2678373-2678804:-1:exon

tufm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: tufm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor Tu, mitochondrial isoform X2
translation: MAALRVGRGVPSSCIWTLLTVRATPLTHCALVAPILTRNLAAEAKKTYQREKPHMNIGTIGHVDHGKTTLTAAITKVLAEAGGAKFKKYEDIDNAPEEKARGITINASHVEYTTPNRHYAHTDCPGHADYVKNMITGTAQLDGCILVVAATDGQMPQTREHLLLAKQNRKEEIGRDSIVKLLDAVDTFIPLPDRDLEHPFLLPIEQIYSIPGRGTVVTGTLERGVIKKGDDCEFIGHNKNLRSVVTGIEMFHQNLDRAEAGDNLGALVRGLKREDVRRGMILCKPGSIKPHQKVEAQVYVLSKEEGGRHKPFIANFKPVMFSLTWDMACQVQLPTGKELVMPGEDTSLTLTLRQPMVLEKGQRFTLRDGNRTIGTGLVTAVHESLGADELNWG
SIO_010081: tufm
subclass of: SO_0000673
so part of: tufm
location: complement(join(2678634..2678804,2681510..2681629,2682662..2682813,2683643..2683747,2683929..2684061,2685299..2685403,2686634..2686800,2696531..2696690,2697357..2697397,2701030..2701057))
location: region:2678634-2701057:-1
so has part: feature:2701030-2701057:-1:exon
so has part: feature:2697357-2697397:-1:exon
so has part: feature:2696531-2696690:-1:exon
so has part: feature:2686634-2686800:-1:exon
so has part: feature:2685299-2685403:-1:exon
so has part: feature:2683929-2684061:-1:exon
so has part: feature:2683643-2683747:-1:exon
so has part: feature:2682662-2682813:-1:exon
so has part: feature:2681510-2681629:-1:exon
so has part: feature:2678634-2678804:-1:exon

XP_041035968.1
type: Protein
SIO_000068: ncbiprotein

position:2678634:-1
position: 2678634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2701057:-1
position: 2701057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2701030-2701057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2697357-2697397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2696531-2696690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2686634-2686800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2685299-2685403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2683929-2684061:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2683643-2683747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2682662-2682813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2681510-2681629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2678634-2678804:-1:exon

tufm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: tufm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor Tu, mitochondrial isoform X1
translation: MAALRVGRGVPSSCIWTLLTVRATPLTHCALVAPILTRNLAAEAKKTYQREKPHMNIGTIGHVDHGKTTLTAAITKVLAEAGGAKFKKYEDIDNAPEEKARGITINASHVEYTTPNRHYAHTDCPGHADYVKNMITGTAQLDGCILVVAATDGQMPQTREHLLLAKQIGVQHIVVYVNKADAVEDKEMLDLVELEMRELLTEFGYDGENTPVILGSALCALENRKEEIGRDSIVKLLDAVDTFIPLPDRDLEHPFLLPIEQIYSIPGRGTVVTGTLERGVIKKGDDCEFIGHNKNLRSVVTGIEMFHQNLDRAEAGDNLGALVRGLKREDVRRGMILCKPGSIKPHQKVEAQVYVLSKEEGGRHKPFIANFKPVMFSLTWDMACQVQLPTGKELVMPGEDTSLTLTLRQPMVLEKGQRFTLRDGNRTIGTGLVTAVHESLGADELNWG
SIO_010081: tufm
subclass of: SO_0000673
so part of: tufm
location: complement(join(2678634..2678804,2681510..2681629,2682662..2682813,2683643..2683747,2683929..2684061,2684409..2684573,2685299..2685403,2686634..2686800,2696531..2696690,2697357..2697397,2701030..2701057))
location: region:2678634-2701057:-1
so has part: feature:2701030-2701057:-1:exon
so has part: feature:2697357-2697397:-1:exon
so has part: feature:2696531-2696690:-1:exon
so has part: feature:2686634-2686800:-1:exon
so has part: feature:2685299-2685403:-1:exon
so has part: feature:2684409-2684573:-1:exon
so has part: feature:2683929-2684061:-1:exon
so has part: feature:2683643-2683747:-1:exon
so has part: feature:2682662-2682813:-1:exon
so has part: feature:2681510-2681629:-1:exon
so has part: feature:2678634-2678804:-1:exon

XP_041035967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2701030-2701057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2697357-2697397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2696531-2696690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2686634-2686800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2685299-2685403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2684409-2684573:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2683929-2684061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2683643-2683747:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2682662-2682813:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2681510-2681629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2678634-2678804:-1:exon

LOC121273049
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2735529..2808595
location: region:2735529-2808595:1
so has part: feature:2735529-2808595:1:exon
subclass of: SO_0000010

121273049
type: Gene
SIO_000068: ncbigene

position:2735529:1
position: 2735529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2808595:1
position: 2808595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735529-2808595:1:exon

LOC121273049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273049
product: sarcoplasmic/endoplasmic reticulum calcium ATPase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041180000.1
SIO_010081: LOC121273049
subclass of: SO_0000673
so part of: LOC121273049
location: join(2735529..2735699,2738898..2738915,2740727..2740809,2752431..2752535,2753236..2753374,2763751..2763831,2781591..2781676,2785960..2786257,2786966..2787132,2788386..2788474,2789681..2789783,2790522..2790653,2791448..2791573,2792865..2793083,2794472..2794807,2795605..2795825,2796974..2797176,2798803..2798888,2800842..2800975,2803142..2803259,2806458..2806575,2808490..2808595)
location: region:2735529-2808595:1
so has part: feature:2735529-2735699:1:exon
so has part: feature:2738898-2738915:1:exon
so has part: feature:2740727-2740809:1:exon
so has part: feature:2752431-2752535:1:exon
so has part: feature:2753236-2753374:1:exon
so has part: feature:2763751-2763831:1:exon
so has part: feature:2781591-2781676:1:exon
so has part: feature:2785960-2786257:1:exon
so has part: feature:2786966-2787132:1:exon
so has part: feature:2788386-2788474:1:exon
so has part: feature:2789681-2789783:1:exon
so has part: feature:2790522-2790653:1:exon
so has part: feature:2791448-2791573:1:exon
so has part: feature:2792865-2793083:1:exon
so has part: feature:2794472-2794807:1:exon
so has part: feature:2795605-2795825:1:exon
so has part: feature:2796974-2797176:1:exon
so has part: feature:2798803-2798888:1:exon
so has part: feature:2800842-2800975:1:exon
so has part: feature:2803142-2803259:1:exon
so has part: feature:2806458-2806575:1:exon
so has part: feature:2808490-2808595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2735529-2735699:1:exon

position:2735699:1
position: 2735699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2738898-2738915:1:exon

position:2738898:1
position: 2738898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2738915:1
position: 2738915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2740727-2740809:1:exon

position:2740727:1
position: 2740727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2740809:1
position: 2740809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2752431-2752535:1:exon

position:2752431:1
position: 2752431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2752535:1
position: 2752535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2753236-2753374:1:exon

position:2753236:1
position: 2753236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2753374:1
position: 2753374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2763751-2763831:1:exon

position:2763751:1
position: 2763751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2763831:1
position: 2763831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2781591-2781676:1:exon

position:2781591:1
position: 2781591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2781676:1
position: 2781676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2785960-2786257:1:exon

position:2785960:1
position: 2785960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2786257:1
position: 2786257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2786966-2787132:1:exon

position:2786966:1
position: 2786966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2787132:1
position: 2787132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2788386-2788474:1:exon

position:2788386:1
position: 2788386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2788474:1
position: 2788474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2789681-2789783:1:exon

position:2789681:1
position: 2789681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2789783:1
position: 2789783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2790522-2790653:1:exon

position:2790522:1
position: 2790522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2790653:1
position: 2790653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2791448-2791573:1:exon

position:2791448:1
position: 2791448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2791573:1
position: 2791573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2792865-2793083:1:exon

position:2792865:1
position: 2792865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2793083:1
position: 2793083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2794472-2794807:1:exon

position:2794472:1
position: 2794472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2794807:1
position: 2794807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2795605-2795825:1:exon

position:2795605:1
position: 2795605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2795825:1
position: 2795825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2796974-2797176:1:exon

position:2796974:1
position: 2796974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2797176:1
position: 2797176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2798803-2798888:1:exon

position:2798803:1
position: 2798803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2798888:1
position: 2798888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2800842-2800975:1:exon

position:2800842:1
position: 2800842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2800975:1
position: 2800975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2803142-2803259:1:exon

position:2803142:1
position: 2803142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2803259:1
position: 2803259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2806458-2806575:1:exon

position:2806458:1
position: 2806458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2806575:1
position: 2806575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2808490-2808595:1:exon

position:2808490:1
position: 2808490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sarcoplasmic/endoplasmic reticulum calcium ATPase 1
translation: MENGHSKTTEECVAYFGVSEHTGLSPEQVKKNFDKYGPNELPAEEGKTLWQLVAEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAVVGVWQERNAEDAIEALKEYEPEMGKVYRTDKKLVQRIKAREIVPGDIVEVAVGDKVPADIRIINIISTTLRVDQSILTGESVSVIKHTEPIPDPRAVNQDKKNMLFSGTNIGAGKATGVVVATGVSTEIGKIRDQMVGTEQERTPLQQKLDEFGEQLSKVISLICVAVWMINIGHFNDPVHGGSWIRGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFVLDKVEGDVCTLNEFSISGSTYAPEGEVHRNDKPVKSGQYDGLVELATICALCNDSSLDFNEAKGIYEKVGEATETALVCLVEKMNVFNTDVRSMSKAERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCSPAKASRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTAAIRDKILTVIKEWGTGRDTLRCLALATRDTPPKREDMNLEDSTKFVLYECDMTFVGVVGMLDPPRKEVIGSILLCREAGIRVIMITGDNKGTAVAICRRIGIFGEDEDVAGKAFTGREFDDLPATEQRKACHNASCFARVEPAHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPRVTYHQLSHFMHCTDEHVDFEGVECDIFEASEPMTMALSVLVTIEMSNALNSLSENQSLIRMPPWLNGWLLGSICLSMSLHFFILYVDPLPLIFKLTHLTFTQWLVVLEISFPVILIDEVLKFFARNYLEAKEHI
SIO_010081: LOC121273049
subclass of: SO_0000673
so part of: LOC121273049
location: join(2735582..2735699,2738898..2738915,2740727..2740809,2752431..2752535,2753236..2753374,2763751..2763831,2781591..2781676,2785960..2786257,2786966..2787132,2788386..2788474,2789681..2789783,2790522..2790653,2791448..2791573,2792865..2793083,2794472..2794807,2795605..2795825,2796974..2797176,2798803..2798888,2800842..2800975,2803142..2803259,2806458..2806575,2808490..2808506)
location: region:2735582-2808506:1
so has part: feature:2735582-2735699:1:exon
so has part: feature:2738898-2738915:1:exon
so has part: feature:2740727-2740809:1:exon
so has part: feature:2752431-2752535:1:exon
so has part: feature:2753236-2753374:1:exon
so has part: feature:2763751-2763831:1:exon
so has part: feature:2781591-2781676:1:exon
so has part: feature:2785960-2786257:1:exon
so has part: feature:2786966-2787132:1:exon
so has part: feature:2788386-2788474:1:exon
so has part: feature:2789681-2789783:1:exon
so has part: feature:2790522-2790653:1:exon
so has part: feature:2791448-2791573:1:exon
so has part: feature:2792865-2793083:1:exon
so has part: feature:2794472-2794807:1:exon
so has part: feature:2795605-2795825:1:exon
so has part: feature:2796974-2797176:1:exon
so has part: feature:2798803-2798888:1:exon
so has part: feature:2800842-2800975:1:exon
so has part: feature:2803142-2803259:1:exon
so has part: feature:2806458-2806575:1:exon
so has part: feature:2808490-2808506:1:exon

XP_041035934.1
type: Protein
SIO_000068: ncbiprotein

position:2735582:1
position: 2735582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2808506:1
position: 2808506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735582-2735699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2738898-2738915:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2740727-2740809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2752431-2752535:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2753236-2753374:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2763751-2763831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2781591-2781676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2785960-2786257:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2786966-2787132:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2788386-2788474:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2789681-2789783:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2790522-2790653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2791448-2791573:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2792865-2793083:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2794472-2794807:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2795605-2795825:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2796974-2797176:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2798803-2798888:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2800842-2800975:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2803142-2803259:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2806458-2806575:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2808490-2808506:1:exon

LOC121273050
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2821128..2907646)
location: region:2821128-2907646:-1
so has part: feature:2821128-2907646:-1:exon
subclass of: SO_0000010

121273050
type: Gene
SIO_000068: ncbigene

position:2821128:-1
position: 2821128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907646:-1
position: 2907646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2821128-2907646:-1:exon

LOC121273050
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273050
product: rab GTPase-binding effector protein 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041180001.1
SIO_010081: LOC121273050
subclass of: SO_0000673
so part of: LOC121273050
location: complement(join(2821128..2821295,2836272..2836388,2837127..2837225,2839341..2839396,2841709..2841763,2841878..2842009,2878869..2878967,2879848..2879965,2892680..2893030,2896705..2896800,2898847..2899004,2902340..2902516,2907476..2907646))
location: region:2821128-2907646:-1
so has part: feature:2907476-2907646:-1:exon
so has part: feature:2902340-2902516:-1:exon
so has part: feature:2898847-2899004:-1:exon
so has part: feature:2896705-2896800:-1:exon
so has part: feature:2892680-2893030:-1:exon
so has part: feature:2879848-2879965:-1:exon
so has part: feature:2878869-2878967:-1:exon
so has part: feature:2841878-2842009:-1:exon
so has part: feature:2841709-2841763:-1:exon
so has part: feature:2839341-2839396:-1:exon
so has part: feature:2837127-2837225:-1:exon
so has part: feature:2836272-2836388:-1:exon
so has part: feature:2821128-2821295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2907476-2907646:-1:exon

position:2907476:-1
position: 2907476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2902340-2902516:-1:exon

position:2902340:-1
position: 2902340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2902516:-1
position: 2902516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2898847-2899004:-1:exon

position:2898847:-1
position: 2898847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2899004:-1
position: 2899004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2896705-2896800:-1:exon

position:2896705:-1
position: 2896705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2896800:-1
position: 2896800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2892680-2893030:-1:exon

position:2892680:-1
position: 2892680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2893030:-1
position: 2893030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2879848-2879965:-1:exon

position:2879848:-1
position: 2879848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2879965:-1
position: 2879965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2878869-2878967:-1:exon

position:2878869:-1
position: 2878869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2878967:-1
position: 2878967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2841878-2842009:-1:exon

position:2841878:-1
position: 2841878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2842009:-1
position: 2842009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2841709-2841763:-1:exon

position:2841709:-1
position: 2841709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2841763:-1
position: 2841763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2839341-2839396:-1:exon

position:2839341:-1
position: 2839341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2839396:-1
position: 2839396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2837127-2837225:-1:exon

position:2837127:-1
position: 2837127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837225:-1
position: 2837225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2836272-2836388:-1:exon

position:2836272:-1
position: 2836272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2836388:-1
position: 2836388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2821128-2821295:-1:exon

position:2821295:-1
position: 2821295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121273050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273050
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rab GTPase-binding effector protein 2-like
translation: MEAGGGGGSEPPAGEGGAPVDCSVEALQLQLSEALAEIENIKAIATVSESTKQEAIDQVKQHCQEEVASLQTIMKESISNYEAQLRNVEKERSQWRQFQDAKEREIAKLRRHLSGSLPQDNLENEMRKAQEDAEKLRSIVMPMEQEIASLKQKLAKAQDQLSADSPQAPLTHRCETETPWREEPLVPRRGSPREWGSEESDSASETPAGADTFAANCAGWTTASGPAPSPLARPLPPGKEDTASLLSTGTLVPESIYLPPPGCHLLHDEEWNELHQEVKQHQVSLHQTRGAAGERDCSSQKPGGSTRQSSVECGQEVALLKDKVDSSMLEIQRLKEMFTLVQDRTQKQMAQLMGTHKVLCGRMQHLLMENQKLKTLHGPPTPVEVPQTSVSGQVTQDSPSQSGRPEENVHIAGELTLAPAAESSHVRNSELLTGLQEKTAKVATLHTLCNQQRLELQARMEERADLMVKLQEEKAKGQRLQIELDTSEQVQKDFVKLSQALQVRLEQIRQADSIEAIRLILDSVTNLKDASQLRGPWDQGS
SIO_010081: LOC121273050
subclass of: SO_0000673
so part of: LOC121273050
location: complement(join(2821176..2821295,2836272..2836388,2837127..2837225,2839341..2839396,2841709..2841763,2841878..2842009,2878869..2878967,2879848..2879965,2892680..2893030,2896705..2896800,2898847..2899004,2902340..2902516,2907476..2907524))
location: region:2821176-2907524:-1
so has part: feature:2907476-2907524:-1:exon
so has part: feature:2902340-2902516:-1:exon
so has part: feature:2898847-2899004:-1:exon
so has part: feature:2896705-2896800:-1:exon
so has part: feature:2892680-2893030:-1:exon
so has part: feature:2879848-2879965:-1:exon
so has part: feature:2878869-2878967:-1:exon
so has part: feature:2841878-2842009:-1:exon
so has part: feature:2841709-2841763:-1:exon
so has part: feature:2839341-2839396:-1:exon
so has part: feature:2837127-2837225:-1:exon
so has part: feature:2836272-2836388:-1:exon
so has part: feature:2821176-2821295:-1:exon

XP_041035935.1
type: Protein
SIO_000068: ncbiprotein

position:2821176:-1
position: 2821176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2907524:-1
position: 2907524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2907476-2907524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2902340-2902516:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2898847-2899004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2896705-2896800:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2892680-2893030:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2879848-2879965:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2878869-2878967:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2841878-2842009:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2841709-2841763:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2839341-2839396:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2837127-2837225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2836272-2836388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2821176-2821295:-1:exon

LOC121273069
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121273069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2935553..2983088
location: region:2935553-2983088:1
so has part: feature:2935553-2983088:1:exon
subclass of: SO_0000010

121273069
type: Gene
SIO_000068: ncbigene

position:2935553:1
position: 2935553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2983088:1
position: 2983088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2935553-2983088:1:exon

LOC121273069
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121273069
product: uncharacterized LOC121273069
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041180022.1
SIO_010081: LOC121273069
subclass of: SO_0000673
so part of: LOC121273069
location: join(2935553..2935838,2937275..2937379,2938652..2938697,2943503..2943582,2945293..2945412,2949749..2949799,2950502..2950546,2950931..2950999,2951638..2951742,2953171..2953275,2953678..2953911,2963667..2963842,2967289..2967447,2969697..2969792,2973633..2973984,2981990..2982106,2982988..2983088)
location: region:2935553-2983088:1
so has part: feature:2935553-2935838:1:exon
so has part: feature:2937275-2937379:1:exon
so has part: feature:2938652-2938697:1:exon
so has part: feature:2943503-2943582:1:exon
so has part: feature:2945293-2945412:1:exon
so has part: feature:2949749-2949799:1:exon
so has part: feature:2950502-2950546:1:exon
so has part: feature:2950931-2950999:1:exon
so has part: feature:2951638-2951742:1:exon
so has part: feature:2953171-2953275:1:exon
so has part: feature:2953678-2953911:1:exon
so has part: feature:2963667-2963842:1:exon
so has part: feature:2967289-2967447:1:exon
so has part: feature:2969697-2969792:1:exon
so has part: feature:2973633-2973984:1:exon
so has part: feature:2981990-2982106:1:exon
so has part: feature:2982988-2983088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2935553-2935838:1:exon

position:2935838:1
position: 2935838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2937275-2937379:1:exon

position:2937275:1
position: 2937275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937379:1
position: 2937379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2938652-2938697:1:exon

position:2938652:1
position: 2938652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2938697:1
position: 2938697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2943503-2943582:1:exon

position:2943503:1
position: 2943503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2943582:1
position: 2943582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2945293-2945412:1:exon

position:2945293:1
position: 2945293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2945412:1
position: 2945412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2949749-2949799:1:exon

position:2949749:1
position: 2949749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949799:1
position: 2949799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2950502-2950546:1:exon

position:2950502:1
position: 2950502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2950546:1
position: 2950546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2950931-2950999:1:exon

position:2950931:1
position: 2950931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2950999:1
position: 2950999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2951638-2951742:1:exon

position:2951638:1
position: 2951638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2951742:1
position: 2951742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2953171-2953275:1:exon

position:2953171:1
position: 2953171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953275:1
position: 2953275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2953678-2953911:1:exon

position:2953678:1
position: 2953678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953911:1
position: 2953911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2963667-2963842:1:exon

position:2963667:1
position: 2963667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2963842:1
position: 2963842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2967289-2967447:1:exon

position:2967289:1
position: 2967289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2967447:1
position: 2967447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2969697-2969792:1:exon

position:2969697:1
position: 2969697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2969792:1
position: 2969792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2973633-2973984:1:exon

position:2973633:1
position: 2973633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2973984:1
position: 2973984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2981990-2982106:1:exon

position:2981990:1
position: 2981990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2982106:1
position: 2982106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2982988-2983088:1:exon

position:2982988:1
position: 2982988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121273069
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121273069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121273069
translation: MPIFYSCTGDDVWIRCELPATNTQAWAKRSTSSDRRGRAETCGLLERASLRRGYAVSLARGASLVVLDPRPQDAGTYLCGVGGKEYRVRLRVVGPGFLEVLRKWWIPLATMICASCLSASTFGLVLKLRRKWQHQARNKRISRMMSSFFKKTSALDTQLNGTYRNHVSTMEQGAEVNHSGSGSTSYENLGSPEEDGGAAEQPLTSEFDEEQDVGLSYENLCAEEDQVSEDYLEPNIDTGSVNTDDYMEPDCDSGDRQQNCTDTCSPVAPPLSDSQSERPRTGSLYAAPKMRSQRQEERSGEEDPPRYTGQDSEGWRRGSHYTAPQSKNYSNEDSSDEDYAVPDPDSPVKLQMCTSSTYMNRESGKGELRRTGVLGVTLPGGWESWRHSSSGRSIDSGTWQPGKGGGNAFGVEGPLWAPVDCSVEALQLQLSEALAEIENIKAIATVSESTKQEAIDQVKQHCQEEVASLQTIMKESISNYEAQLRNVEKERSQWRQFQDAKEREIAKLRRHLSGSLPQDNLENEMRKAQEDAEKLRSIVMPMEQEIASLKQKLAKAQDQLSADSPQAPLTHRCETETPWREEPLVPRRGSPREWGSEESDSASETPAGADTFAANCAGWTTASGPAPSPLARPLPPGKEDTASLLSTGTLVPESIYLPPARVSPTPR
SIO_010081: LOC121273069
subclass of: SO_0000673
so part of: LOC121273069
location: join(2935553..2935838,2937275..2937379,2938652..2938697,2943503..2943582,2945293..2945412,2949749..2949799,2950502..2950546,2950931..2950999,2951638..2951742,2953171..2953275,2953678..2953911,2963667..2963842,2967289..2967447,2969697..2969792,2973633..2973959)
location: region:2935553-2973959:1
so has part: feature:2935553-2935838:1:exon
so has part: feature:2937275-2937379:1:exon
so has part: feature:2938652-2938697:1:exon
so has part: feature:2943503-2943582:1:exon
so has part: feature:2945293-2945412:1:exon
so has part: feature:2949749-2949799:1:exon
so has part: feature:2950502-2950546:1:exon
so has part: feature:2950931-2950999:1:exon
so has part: feature:2951638-2951742:1:exon
so has part: feature:2953171-2953275:1:exon
so has part: feature:2953678-2953911:1:exon
so has part: feature:2963667-2963842:1:exon
so has part: feature:2967289-2967447:1:exon
so has part: feature:2969697-2969792:1:exon
so has part: feature:2973633-2973959:1:exon

XP_041035956.1
type: Protein
SIO_000068: ncbiprotein

position:2973959:1
position: 2973959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2935553-2935838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2937275-2937379:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2938652-2938697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2943503-2943582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2945293-2945412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2949749-2949799:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2950502-2950546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950931-2950999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2951638-2951742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2953171-2953275:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2953678-2953911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2963667-2963842:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2967289-2967447:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2969697-2969792:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2973633-2973959:1:exon