Carcharodon carcharias isolate sCarCar2 chromosome 32, sCarCar2.pri, whole genome shotgun sequence.
type: Entry
definition: Carcharodon carcharias isolate sCarCar2 chromosome 32, sCarCar2.pri, whole genome shotgun sequence.
sequence version: NC_054498.1
sequence date: 2021-05-03
sequence: sequence
division: CON
label: NC_054498.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA725502
dblink: SAMN12629504
keyword: WGS
keyword: RefSeq
source: Carcharodon carcharias (great white shark)
organism: Carcharodon carcharias
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Lamniformes; Alopiidae; Carcharodon.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM029996.1.\nAssembly name: sCarCar2.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/03/30. The original whole-genome shotgun project has the\naccession JAGDEE000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 05-FEB-2021\nAssembly Method :: FALCON v. DX 2.0.1; FALCON-Unzip v. DX\n 1.2.1; purge_dups v. DX 19-08-10;\n scaff10X v. DX 2.0.3; bionano Solve v. DX\n 3.4.0; Salsa2 HiC v. DX 2.2.0; Arrow\n polishing and gap filling v. DX 7.0.1.1;\n Longranger Align DX v. 2.2.2.1; freebayes\n DX v. 19-07-11; gEVAL manual curation v.\n 2021-02-05; VGP assembly pipeline v. 1.6\nAssembly Name :: sCarCar2.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 66.84x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Carcharodon carcharias Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 30807379
topology: linear
so has quality: SO_0000987
location: 1..30807379
location: region:1-30807379:1
RO_0002162: 13397

NC_054498
type: RefSeq
SIO_000068: refseq

PRJNA725502
type: BioProject
SIO_000068: bioproject

SAMN12629504
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30807379:1
position: 30807379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30807379:1:source
so part of: sequence
organism: Carcharodon carcharias
mol type: genomic DNA
isolate: sCarCar2
chromosome: 32
sex: male
tissue type: blood
dev stage: juvenile
country: USA
lat lon: 33.782158 N 118.12249 W
collection date: 2019-01-30
collected by: Chris Lowe, Kady Lyons

13397
type: Taxonomy
SIO_000068: taxonomy

LOC121271944
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121271944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(54860..261999)
location: region:54860-261999:-1
so has part: feature:54860-261999:-1:exon
subclass of: SO_0000010

121271944
type: Gene
SIO_000068: ncbigene

position:54860:-1
position: 54860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261999:-1
position: 261999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54860-261999:-1:exon

LOC121271944
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121271944
product: thrombospondin type-1 domain-containing protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041178201.1
SIO_010081: LOC121271944
subclass of: SO_0000673
so part of: LOC121271944
location: complement(join(54860..55230,57811..57955,63516..63695,71292..71465,94171..94344,95293..95497,95601..95730,99463..99675,109762..109858,125359..125534,155794..155998,204773..204909,212523..212625,243913..244336,261566..261999))
location: region:54860-261999:-1
so has part: feature:261566-261999:-1:exon
so has part: feature:243913-244336:-1:exon
so has part: feature:212523-212625:-1:exon
so has part: feature:204773-204909:-1:exon
so has part: feature:155794-155998:-1:exon
so has part: feature:125359-125534:-1:exon
so has part: feature:109762-109858:-1:exon
so has part: feature:99463-99675:-1:exon
so has part: feature:95601-95730:-1:exon
so has part: feature:95293-95497:-1:exon
so has part: feature:94171-94344:-1:exon
so has part: feature:71292-71465:-1:exon
so has part: feature:63516-63695:-1:exon
so has part: feature:57811-57955:-1:exon
so has part: feature:54860-55230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261566-261999:-1:exon

position:261566:-1
position: 261566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243913-244336:-1:exon

position:243913:-1
position: 243913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244336:-1
position: 244336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212523-212625:-1:exon

position:212523:-1
position: 212523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212625:-1
position: 212625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204773-204909:-1:exon

position:204773:-1
position: 204773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204909:-1
position: 204909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:155794-155998:-1:exon

position:155794:-1
position: 155794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155998:-1
position: 155998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:125359-125534:-1:exon

position:125359:-1
position: 125359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125534:-1
position: 125534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:109762-109858:-1:exon

position:109762:-1
position: 109762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109858:-1
position: 109858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:99463-99675:-1:exon

position:99463:-1
position: 99463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99675:-1
position: 99675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:95601-95730:-1:exon

position:95601:-1
position: 95601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95730:-1
position: 95730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:95293-95497:-1:exon

position:95293:-1
position: 95293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95497:-1
position: 95497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:94171-94344:-1:exon

position:94171:-1
position: 94171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94344:-1
position: 94344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:71292-71465:-1:exon

position:71292:-1
position: 71292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71465:-1
position: 71465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:63516-63695:-1:exon

position:63516:-1
position: 63516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63695:-1
position: 63695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:57811-57955:-1:exon

position:57811:-1
position: 57811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57955:-1
position: 57955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:54860-55230:-1:exon

position:55230:-1
position: 55230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121271944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121271944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thrombospondin type-1 domain-containing protein 4-like
translation: MSAGSPGMWGSWGPWSACSQTCGNGVKEQTRPCLPVTTPYQRGIIYPRNGPSFSSSDQSRSPTYSRYQKESMNLHSGHVFSALRPSLPLHRSKGHLKPELQSSASLSRNESQISQEILRGSRRSLLQGQSAELARRFRTKSSIVPGKYGYGRVPYVLPLQTLVGQLSQQAKRQKRQRFGGHRHSQNQKPIPFSQHFNVHQGGFQIKPLLQTSSSPNHQPASHHSQTFHSLQGANSNSDSSNLSSQDVQQTGQDTHLTATNSITCTGAYKQYRLCNIDSCPRSGRDIRELQCASYNNQPFMGQFYEWEPFNDVRGHQKCELNCRAVGYRFYLRQAEKVIDGTPCDPNATSLCVSGQCKKIGCDEYLGSDKLMDKCGICGGDNTACNVISGVFKRRLPTVGYHKIVEIPKGATKINVTELAKSRNYLALRSHSGRSIINGNWAIDRPGKYEGGGTMFTYKRPNEISSTAGESFLAEGPTNEALDVFMIYQQLNPGIQYEYILPKTNVVSHQVPPSIRLGKLLNGQLDVTEDSFAVNSGYESTNFQTRDPGRFPPHDPGTQVPVMQPPRHFHEYNWKKVGMTECTATCGRGSHYTVFHCVNRNTLEEVSDNLCDISIKPSSEEEACNINSCPAFWDIGEWSECSKTCGLGMQHRQILCRQVYANYTTTVQPYRCQFLEKPETISTCQMKICSGWQIYTEWSSCSAPCGVGQRNRDVKCVSNLGDIVDDEECNMRLRPNDIENCDMGPCAKSWFFTEWSDRCSTECGEGMKSRSVICLTNHISSLPLEGCGNERPTDTMRCRSNPCDSHVQWFTGHWSQCSTECSNGTQYRDVICIRKTQDNFTVVNSYECAAVNRPPTQQSCYLKPCGAKWFYTEWSTCSKSCEGGFRVREVRCLGDDMIPSERCDINQKPEEHQSCNNKPCTPQIDESCIDKYYNCNVVVQAQLCVYSYYKTACCASCTKVAKRLSAFLGRR
SIO_010081: LOC121271944
subclass of: SO_0000673
so part of: LOC121271944
location: complement(join(55088..55230,57811..57955,63516..63695,71292..71465,94171..94344,95293..95497,95601..95730,99463..99675,109762..109858,125359..125534,155794..155998,204773..204909,212523..212625,243913..244336,261566..261972))
location: region:55088-261972:-1
so has part: feature:261566-261972:-1:exon
so has part: feature:243913-244336:-1:exon
so has part: feature:212523-212625:-1:exon
so has part: feature:204773-204909:-1:exon
so has part: feature:155794-155998:-1:exon
so has part: feature:125359-125534:-1:exon
so has part: feature:109762-109858:-1:exon
so has part: feature:99463-99675:-1:exon
so has part: feature:95601-95730:-1:exon
so has part: feature:95293-95497:-1:exon
so has part: feature:94171-94344:-1:exon
so has part: feature:71292-71465:-1:exon
so has part: feature:63516-63695:-1:exon
so has part: feature:57811-57955:-1:exon
so has part: feature:55088-55230:-1:exon

XP_041034135.1
type: Protein
SIO_000068: ncbiprotein

position:55088:-1
position: 55088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261972:-1
position: 261972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261566-261972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243913-244336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212523-212625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204773-204909:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:155794-155998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:125359-125534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109762-109858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99463-99675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95601-95730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95293-95497:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94171-94344:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:71292-71465:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:63516-63695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:57811-57955:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:55088-55230:-1:exon

LOC121272159
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272159
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(101917..102052)
location: region:101917-102052:-1
so has part: feature:101917-102052:-1:exon
subclass of: SO_0000623

121272159
type: Gene
SIO_000068: ncbigene

position:101917:-1
position: 101917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102052:-1
position: 102052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101917-102052:-1:exon

LOC121272159
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13397
nc RNA class: snRNA
gene: LOC121272159
product: U4 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005941854.1
SIO_010081: LOC121272159
subclass of: SO_0000673
so part of: LOC121272159
location: complement(101917..102052)
location: region:101917-102052:-1
so has part: feature:101917-102052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101917-102052:-1:exon

LOC121272153
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(318016..562693)
location: region:318016-562693:-1
so has part: feature:318016-562693:-1:exon
subclass of: SO_0000010

121272153
type: Gene
SIO_000068: ncbigene

position:318016:-1
position: 318016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562693:-1
position: 562693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318016-562693:-1:exon

LOC121272153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272153
product: leucine-rich repeat-containing protein 49, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178664.1
SIO_010081: LOC121272153
subclass of: SO_0000673
so part of: LOC121272153
location: complement(join(318016..321017,322809..322962,368537..368646,379306..379491,380424..380661,388905..388991,394395..394576,433070..433153,464431..464578,484047..484108,497266..497409,508278..508344,535449..535652,551896..552001,555060..555147,556634..556705,562529..562693))
location: region:318016-562693:-1
so has part: feature:562529-562693:-1:exon
so has part: feature:556634-556705:-1:exon
so has part: feature:555060-555147:-1:exon
so has part: feature:551896-552001:-1:exon
so has part: feature:535449-535652:-1:exon
so has part: feature:508278-508344:-1:exon
so has part: feature:497266-497409:-1:exon
so has part: feature:484047-484108:-1:exon
so has part: feature:464431-464578:-1:exon
so has part: feature:433070-433153:-1:exon
so has part: feature:394395-394576:-1:exon
so has part: feature:388905-388991:-1:exon
so has part: feature:380424-380661:-1:exon
so has part: feature:379306-379491:-1:exon
so has part: feature:368537-368646:-1:exon
so has part: feature:322809-322962:-1:exon
so has part: feature:318016-321017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562529-562693:-1:exon

position:562529:-1
position: 562529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556634-556705:-1:exon

position:556634:-1
position: 556634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556705:-1
position: 556705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555060-555147:-1:exon

position:555060:-1
position: 555060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555147:-1
position: 555147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:551896-552001:-1:exon

position:551896:-1
position: 551896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552001:-1
position: 552001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:535449-535652:-1:exon

position:535449:-1
position: 535449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535652:-1
position: 535652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:508278-508344:-1:exon

position:508278:-1
position: 508278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508344:-1
position: 508344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:497266-497409:-1:exon

position:497266:-1
position: 497266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497409:-1
position: 497409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:484047-484108:-1:exon

position:484047:-1
position: 484047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484108:-1
position: 484108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:464431-464578:-1:exon

position:464431:-1
position: 464431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464578:-1
position: 464578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:433070-433153:-1:exon

position:433070:-1
position: 433070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433153:-1
position: 433153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:394395-394576:-1:exon

position:394395:-1
position: 394395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394576:-1
position: 394576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:388905-388991:-1:exon

position:388905:-1
position: 388905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388991:-1
position: 388991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:380424-380661:-1:exon

position:380424:-1
position: 380424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380661:-1
position: 380661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:379306-379491:-1:exon

position:379306:-1
position: 379306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379491:-1
position: 379491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:368537-368646:-1:exon

position:368537:-1
position: 368537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368646:-1
position: 368646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:322809-322962:-1:exon

position:322809:-1
position: 322809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322962:-1
position: 322962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:318016-321017:-1:exon

position:321017:-1
position: 321017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121272153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272153
product: leucine-rich repeat-containing protein 49, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178665.1
SIO_010081: LOC121272153
subclass of: SO_0000673
so part of: LOC121272153
location: complement(join(318016..321017,322809..322962,368537..368646,379306..379491,380424..380661,388905..388991,394395..394576,433070..433153,464431..464578,484047..484108,497266..497409,508278..508344,551896..552001,552961..553134,555060..555147,556634..556705,562529..562693))
location: region:318016-562693:-1
so has part: feature:562529-562693:-1:exon
so has part: feature:556634-556705:-1:exon
so has part: feature:555060-555147:-1:exon
so has part: feature:552961-553134:-1:exon
so has part: feature:551896-552001:-1:exon
so has part: feature:508278-508344:-1:exon
so has part: feature:497266-497409:-1:exon
so has part: feature:484047-484108:-1:exon
so has part: feature:464431-464578:-1:exon
so has part: feature:433070-433153:-1:exon
so has part: feature:394395-394576:-1:exon
so has part: feature:388905-388991:-1:exon
so has part: feature:380424-380661:-1:exon
so has part: feature:379306-379491:-1:exon
so has part: feature:368537-368646:-1:exon
so has part: feature:322809-322962:-1:exon
so has part: feature:318016-321017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562529-562693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556634-556705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555060-555147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552961-553134:-1:exon

position:552961:-1
position: 552961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553134:-1
position: 553134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:551896-552001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508278-508344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497266-497409:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484047-484108:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464431-464578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:433070-433153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394395-394576:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:388905-388991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380424-380661:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379306-379491:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:368537-368646:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322809-322962:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:318016-321017:-1:exon

LOC121272153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272153
product: leucine-rich repeat-containing protein 49, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178663.1
SIO_010081: LOC121272153
subclass of: SO_0000673
so part of: LOC121272153
location: complement(join(318016..321017,322809..322962,368537..368646,379306..379491,380424..380661,388905..388991,394395..394576,433070..433153,464431..464578,484047..484108,497266..497409,508278..508344,535449..535652,551896..552001,552961..553134,555060..555147,556634..556705,562529..562693))
location: region:318016-562693:-1
so has part: feature:562529-562693:-1:exon
so has part: feature:556634-556705:-1:exon
so has part: feature:555060-555147:-1:exon
so has part: feature:552961-553134:-1:exon
so has part: feature:551896-552001:-1:exon
so has part: feature:535449-535652:-1:exon
so has part: feature:508278-508344:-1:exon
so has part: feature:497266-497409:-1:exon
so has part: feature:484047-484108:-1:exon
so has part: feature:464431-464578:-1:exon
so has part: feature:433070-433153:-1:exon
so has part: feature:394395-394576:-1:exon
so has part: feature:388905-388991:-1:exon
so has part: feature:380424-380661:-1:exon
so has part: feature:379306-379491:-1:exon
so has part: feature:368537-368646:-1:exon
so has part: feature:322809-322962:-1:exon
so has part: feature:318016-321017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562529-562693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556634-556705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555060-555147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552961-553134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551896-552001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535449-535652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508278-508344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:497266-497409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484047-484108:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:464431-464578:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:433070-433153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:394395-394576:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:388905-388991:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:380424-380661:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:379306-379491:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:368537-368646:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:322809-322962:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:318016-321017:-1:exon

LOC121272153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272153
product: leucine-rich repeat-containing protein 49, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178666.1
SIO_010081: LOC121272153
subclass of: SO_0000673
so part of: LOC121272153
location: complement(join(318016..321017,322809..322962,368537..368646,379306..379491,380424..380661,388905..388991,394395..394576,433070..433153,464431..464578,484047..484108,497266..497409,508278..508344,535449..535652,551896..552001,552961..553134,555060..555147,556634..556705,560366..560459))
location: region:318016-560459:-1
so has part: feature:560366-560459:-1:exon
so has part: feature:556634-556705:-1:exon
so has part: feature:555060-555147:-1:exon
so has part: feature:552961-553134:-1:exon
so has part: feature:551896-552001:-1:exon
so has part: feature:535449-535652:-1:exon
so has part: feature:508278-508344:-1:exon
so has part: feature:497266-497409:-1:exon
so has part: feature:484047-484108:-1:exon
so has part: feature:464431-464578:-1:exon
so has part: feature:433070-433153:-1:exon
so has part: feature:394395-394576:-1:exon
so has part: feature:388905-388991:-1:exon
so has part: feature:380424-380661:-1:exon
so has part: feature:379306-379491:-1:exon
so has part: feature:368537-368646:-1:exon
so has part: feature:322809-322962:-1:exon
so has part: feature:318016-321017:-1:exon

position:560459:-1
position: 560459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560366-560459:-1:exon

position:560366:-1
position: 560366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556634-556705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555060-555147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552961-553134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551896-552001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535449-535652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508278-508344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:497266-497409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484047-484108:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:464431-464578:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:433070-433153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:394395-394576:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:388905-388991:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:380424-380661:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:379306-379491:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:368537-368646:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:322809-322962:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:318016-321017:-1:exon

LOC121272153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272153
product: leucine-rich repeat-containing protein 49, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178667.1
SIO_010081: LOC121272153
subclass of: SO_0000673
so part of: LOC121272153
location: complement(join(318016..321017,322809..322962,368537..368646,379306..379491,380424..380661,388905..388991,394395..394576,433070..433153,464431..464578,484047..484108,497266..497409,508278..508344,555060..555097))
location: region:318016-555097:-1
so has part: feature:555060-555097:-1:exon
so has part: feature:508278-508344:-1:exon
so has part: feature:497266-497409:-1:exon
so has part: feature:484047-484108:-1:exon
so has part: feature:464431-464578:-1:exon
so has part: feature:433070-433153:-1:exon
so has part: feature:394395-394576:-1:exon
so has part: feature:388905-388991:-1:exon
so has part: feature:380424-380661:-1:exon
so has part: feature:379306-379491:-1:exon
so has part: feature:368537-368646:-1:exon
so has part: feature:322809-322962:-1:exon
so has part: feature:318016-321017:-1:exon

position:555097:-1
position: 555097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555060-555097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508278-508344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497266-497409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484047-484108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464431-464578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433070-433153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394395-394576:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388905-388991:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:380424-380661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:379306-379491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:368537-368646:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322809-322962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:318016-321017:-1:exon

LOC121272153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 49 isoform X2
translation: MLPSKYRARLLGNPINTCSLQLTVQASTVGDRLSQKQQVDCRLNKELLASHNKVLNVDGDKNFLCKPGDHVIFSEIPSTPGIPVVYRTPEERAEHSDRLNLDRRNLTVCPILEGEQQLRLLNFQHNLITQIQHLSNLRRLIFLDLYNNRIEEISGLSSLKSLRVLMLGKNRIKNISNLESLTDLDVLDLHANQICRMENINHLTELRVLNLAGNFIVHVENMSGLDSLTELNLRRNRIESVRDADTLPRLQRFFLSFNNISRFEDIACLADSLSLSEVTLDGNPIAQESWYKHTILRHMLQLRQLDMKKITEEERRMALIMARKEDDKKREIHKQAILKEKRRLAISNAARQWEIQQTVAAIKEAQQERVKPVGTASNISNHKPRHINEHEHGLWPNESSQLSPNNIIEKEAEDNKQDFPKSEKSSNMRSPDGILTCAVQGLSIADSHLAELEGDTLHLYGFGALESLDRSWGVQTAGTVTTVSFMFIDFDEIVTVLPRLRIKFPNILHLKFQDTNLHKLQQFNALALGRRLDQLTVSSQGNPVVNFSLWKYYVLFRLNHFCLQKINDTEVTPMDIVMGERFFGILARVAASDLPQPRLLSLLGEIKKKQLHFILEGKGKKSGVTLEETKDSIKLGGETVGRAILNYSNKDVTSEKFKETRTFCQVYVQELVKDAALIDVKNESLQKLWPQIFIELVRDCVIQMSNKNSHMKLCLKNIMDQK
SIO_010081: LOC121272153
subclass of: SO_0000673
so part of: LOC121272153
location: complement(join(320823..321017,322809..322962,368537..368646,379306..379491,380424..380661,388905..388991,394395..394576,433070..433153,464431..464578,484047..484108,497266..497409,508278..508344,535449..535652,551896..552001,555060..555147,556634..556705,562529..562570))
location: region:320823-562570:-1
so has part: feature:562529-562570:-1:exon
so has part: feature:556634-556705:-1:exon
so has part: feature:555060-555147:-1:exon
so has part: feature:551896-552001:-1:exon
so has part: feature:535449-535652:-1:exon
so has part: feature:508278-508344:-1:exon
so has part: feature:497266-497409:-1:exon
so has part: feature:484047-484108:-1:exon
so has part: feature:464431-464578:-1:exon
so has part: feature:433070-433153:-1:exon
so has part: feature:394395-394576:-1:exon
so has part: feature:388905-388991:-1:exon
so has part: feature:380424-380661:-1:exon
so has part: feature:379306-379491:-1:exon
so has part: feature:368537-368646:-1:exon
so has part: feature:322809-322962:-1:exon
so has part: feature:320823-321017:-1:exon

XP_041034598.1
type: Protein
SIO_000068: ncbiprotein

position:320823:-1
position: 320823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562570:-1
position: 562570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562529-562570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556634-556705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555060-555147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551896-552001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535449-535652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508278-508344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497266-497409:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484047-484108:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464431-464578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:433070-433153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394395-394576:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:388905-388991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380424-380661:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379306-379491:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:368537-368646:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322809-322962:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:320823-321017:-1:exon

LOC121272153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 49 isoform X3
translation: MLPSKYRARLLGNPINTCSLQLTVQASTVGDRLSQKQQVDCRLNKELLASHNKVLNVDGDKNFLCKPDTICHDDPSHYYSESMSRVTTGDMPSHVPLSVKCKSRQGSRSAVPSPSHSQGTLPYLPGDHVIFSEIPSTPGIPVVYRTPEERAEHSDRLNLDRIKNISNLESLTDLDVLDLHANQICRMENINHLTELRVLNLAGNFIVHVENMSGLDSLTELNLRRNRIESVRDADTLPRLQRFFLSFNNISRFEDIACLADSLSLSEVTLDGNPIAQESWYKHTILRHMLQLRQLDMKKITEEERRMALIMARKEDDKKREIHKQAILKEKRRLAISNAARQWEIQQTVAAIKEAQQERVKPVGTASNISNHKPRHINEHEHGLWPNESSQLSPNNIIEKEAEDNKQDFPKSEKSSNMRSPDGILTCAVQGLSIADSHLAELEGDTLHLYGFGALESLDRSWGVQTAGTVTTVSFMFIDFDEIVTVLPRLRIKFPNILHLKFQDTNLHKLQQFNALALGRRLDQLTVSSQGNPVVNFSLWKYYVLFRLNHFCLQKINDTEVTPMDIVMGERFFGILARVAASDLPQPRLLSLLGEIKKKQLHFILEGKGKKSGVTLEETKDSIKLGGETVGRAILNYSNKDVTSEKFKETRTFCQVYVQELVKDAALIDVKNESLQKLWPQIFIELVRDCVIQMSNKNSHMKLCLKNIMDQK
SIO_010081: LOC121272153
subclass of: SO_0000673
so part of: LOC121272153
location: complement(join(320823..321017,322809..322962,368537..368646,379306..379491,380424..380661,388905..388991,394395..394576,433070..433153,464431..464578,484047..484108,497266..497409,508278..508344,551896..552001,552961..553134,555060..555147,556634..556705,562529..562570))
location: region:320823-562570:-1
so has part: feature:562529-562570:-1:exon
so has part: feature:556634-556705:-1:exon
so has part: feature:555060-555147:-1:exon
so has part: feature:552961-553134:-1:exon
so has part: feature:551896-552001:-1:exon
so has part: feature:508278-508344:-1:exon
so has part: feature:497266-497409:-1:exon
so has part: feature:484047-484108:-1:exon
so has part: feature:464431-464578:-1:exon
so has part: feature:433070-433153:-1:exon
so has part: feature:394395-394576:-1:exon
so has part: feature:388905-388991:-1:exon
so has part: feature:380424-380661:-1:exon
so has part: feature:379306-379491:-1:exon
so has part: feature:368537-368646:-1:exon
so has part: feature:322809-322962:-1:exon
so has part: feature:320823-321017:-1:exon

XP_041034599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562529-562570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556634-556705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555060-555147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552961-553134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551896-552001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508278-508344:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497266-497409:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484047-484108:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464431-464578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:433070-433153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394395-394576:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:388905-388991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380424-380661:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379306-379491:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:368537-368646:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322809-322962:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:320823-321017:-1:exon

LOC121272153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 49 isoform X1
translation: MLPSKYRARLLGNPINTCSLQLTVQASTVGDRLSQKQQVDCRLNKELLASHNKVLNVDGDKNFLCKPDTICHDDPSHYYSESMSRVTTGDMPSHVPLSVKCKSRQGSRSAVPSPSHSQGTLPYLPGDHVIFSEIPSTPGIPVVYRTPEERAEHSDRLNLDRRNLTVCPILEGEQQLRLLNFQHNLITQIQHLSNLRRLIFLDLYNNRIEEISGLSSLKSLRVLMLGKNRIKNISNLESLTDLDVLDLHANQICRMENINHLTELRVLNLAGNFIVHVENMSGLDSLTELNLRRNRIESVRDADTLPRLQRFFLSFNNISRFEDIACLADSLSLSEVTLDGNPIAQESWYKHTILRHMLQLRQLDMKKITEEERRMALIMARKEDDKKREIHKQAILKEKRRLAISNAARQWEIQQTVAAIKEAQQERVKPVGTASNISNHKPRHINEHEHGLWPNESSQLSPNNIIEKEAEDNKQDFPKSEKSSNMRSPDGILTCAVQGLSIADSHLAELEGDTLHLYGFGALESLDRSWGVQTAGTVTTVSFMFIDFDEIVTVLPRLRIKFPNILHLKFQDTNLHKLQQFNALALGRRLDQLTVSSQGNPVVNFSLWKYYVLFRLNHFCLQKINDTEVTPMDIVMGERFFGILARVAASDLPQPRLLSLLGEIKKKQLHFILEGKGKKSGVTLEETKDSIKLGGETVGRAILNYSNKDVTSEKFKETRTFCQVYVQELVKDAALIDVKNESLQKLWPQIFIELVRDCVIQMSNKNSHMKLCLKNIMDQK
SIO_010081: LOC121272153
subclass of: SO_0000673
so part of: LOC121272153
location: complement(join(320823..321017,322809..322962,368537..368646,379306..379491,380424..380661,388905..388991,394395..394576,433070..433153,464431..464578,484047..484108,497266..497409,508278..508344,535449..535652,551896..552001,552961..553134,555060..555147,556634..556705,562529..562570))
location: region:320823-562570:-1
so has part: feature:562529-562570:-1:exon
so has part: feature:556634-556705:-1:exon
so has part: feature:555060-555147:-1:exon
so has part: feature:552961-553134:-1:exon
so has part: feature:551896-552001:-1:exon
so has part: feature:535449-535652:-1:exon
so has part: feature:508278-508344:-1:exon
so has part: feature:497266-497409:-1:exon
so has part: feature:484047-484108:-1:exon
so has part: feature:464431-464578:-1:exon
so has part: feature:433070-433153:-1:exon
so has part: feature:394395-394576:-1:exon
so has part: feature:388905-388991:-1:exon
so has part: feature:380424-380661:-1:exon
so has part: feature:379306-379491:-1:exon
so has part: feature:368537-368646:-1:exon
so has part: feature:322809-322962:-1:exon
so has part: feature:320823-321017:-1:exon

XP_041034597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:562529-562570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556634-556705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555060-555147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552961-553134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551896-552001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535449-535652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508278-508344:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:497266-497409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484047-484108:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:464431-464578:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:433070-433153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:394395-394576:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:388905-388991:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:380424-380661:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:379306-379491:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:368537-368646:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:322809-322962:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:320823-321017:-1:exon

LOC121272153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 49 isoform X4
translation: MSRVTTGDMPSHVPLSVKCKSRQGSRSAVPSPSHSQGTLPYLPGDHVIFSEIPSTPGIPVVYRTPEERAEHSDRLNLDRRNLTVCPILEGEQQLRLLNFQHNLITQIQHLSNLRRLIFLDLYNNRIEEISGLSSLKSLRVLMLGKNRIKNISNLESLTDLDVLDLHANQICRMENINHLTELRVLNLAGNFIVHVENMSGLDSLTELNLRRNRIESVRDADTLPRLQRFFLSFNNISRFEDIACLADSLSLSEVTLDGNPIAQESWYKHTILRHMLQLRQLDMKKITEEERRMALIMARKEDDKKREIHKQAILKEKRRLAISNAARQWEIQQTVAAIKEAQQERVKPVGTASNISNHKPRHINEHEHGLWPNESSQLSPNNIIEKEAEDNKQDFPKSEKSSNMRSPDGILTCAVQGLSIADSHLAELEGDTLHLYGFGALESLDRSWGVQTAGTVTTVSFMFIDFDEIVTVLPRLRIKFPNILHLKFQDTNLHKLQQFNALALGRRLDQLTVSSQGNPVVNFSLWKYYVLFRLNHFCLQKINDTEVTPMDIVMGERFFGILARVAASDLPQPRLLSLLGEIKKKQLHFILEGKGKKSGVTLEETKDSIKLGGETVGRAILNYSNKDVTSEKFKETRTFCQVYVQELVKDAALIDVKNESLQKLWPQIFIELVRDCVIQMSNKNSHMKLCLKNIMDQK
SIO_010081: LOC121272153
subclass of: SO_0000673
so part of: LOC121272153
location: complement(join(320823..321017,322809..322962,368537..368646,379306..379491,380424..380661,388905..388991,394395..394576,433070..433153,464431..464578,484047..484108,497266..497409,508278..508344,535449..535652,551896..552001,552961..553090))
location: region:320823-553090:-1
so has part: feature:552961-553090:-1:exon
so has part: feature:551896-552001:-1:exon
so has part: feature:535449-535652:-1:exon
so has part: feature:508278-508344:-1:exon
so has part: feature:497266-497409:-1:exon
so has part: feature:484047-484108:-1:exon
so has part: feature:464431-464578:-1:exon
so has part: feature:433070-433153:-1:exon
so has part: feature:394395-394576:-1:exon
so has part: feature:388905-388991:-1:exon
so has part: feature:380424-380661:-1:exon
so has part: feature:379306-379491:-1:exon
so has part: feature:368537-368646:-1:exon
so has part: feature:322809-322962:-1:exon
so has part: feature:320823-321017:-1:exon

XP_041034600.1
type: Protein
SIO_000068: ncbiprotein

position:553090:-1
position: 553090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552961-553090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551896-552001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535449-535652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508278-508344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497266-497409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:484047-484108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:464431-464578:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:433070-433153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:394395-394576:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388905-388991:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380424-380661:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:379306-379491:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:368537-368646:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322809-322962:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:320823-321017:-1:exon

LOC121272153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 49 isoform X5
translation: MENINHLTELRVLNLAGNFIVHVENMSGLDSLTELNLRRNRIESVRDADTLPRLQRFFLSFNNISRFEDIACLADSLSLSEVTLDGNPIAQESWYKHTILRHMLQLRQLDMKKITEEERRMALIMARKEDDKKREIHKQAILKEKRRLAISNAARQWEIQQTVAAIKEAQQERVKPVGTASNISNHKPRHINEHEHGLWPNESSQLSPNNIIEKEAEDNKQDFPKSEKSSNMRSPDGILTCAVQGLSIADSHLAELEGDTLHLYGFGALESLDRSWGVQTAGTVTTVSFMFIDFDEIVTVLPRLRIKFPNILHLKFQDTNLHKLQQFNALALGRRLDQLTVSSQGNPVVNFSLWKYYVLFRLNHFCLQKINDTEVTPMDIVMGERFFGILARVAASDLPQPRLLSLLGEIKKKQLHFILEGKGKKSGVTLEETKDSIKLGGETVGRAILNYSNKDVTSEKFKETRTFCQVYVQELVKDAALIDVKNESLQKLWPQIFIELVRDCVIQMSNKNSHMKLCLKNIMDQK
SIO_010081: LOC121272153
subclass of: SO_0000673
so part of: LOC121272153
location: complement(join(320823..321017,322809..322962,368537..368646,379306..379491,380424..380661,388905..388991,394395..394576,433070..433153,464431..464578,484047..484108,497266..497400))
location: region:320823-497400:-1
so has part: feature:497266-497400:-1:exon
so has part: feature:484047-484108:-1:exon
so has part: feature:464431-464578:-1:exon
so has part: feature:433070-433153:-1:exon
so has part: feature:394395-394576:-1:exon
so has part: feature:388905-388991:-1:exon
so has part: feature:380424-380661:-1:exon
so has part: feature:379306-379491:-1:exon
so has part: feature:368537-368646:-1:exon
so has part: feature:322809-322962:-1:exon
so has part: feature:320823-321017:-1:exon

XP_041034601.1
type: Protein
SIO_000068: ncbiprotein

position:497400:-1
position: 497400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497266-497400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484047-484108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464431-464578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433070-433153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:394395-394576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388905-388991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380424-380661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:379306-379491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368537-368646:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:322809-322962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320823-321017:-1:exon

larp6a
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: larp6a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 585090..600556
location: region:585090-600556:1
so has part: feature:585090-600556:1:exon
subclass of: SO_0000010

121272112
type: Gene
SIO_000068: ncbigene

position:585090:1
position: 585090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600556:1
position: 600556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585090-600556:1:exon

larp6a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: larp6a
product: La ribonucleoprotein 6, translational regulator a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178565.1
SIO_010081: larp6a
subclass of: SO_0000673
so part of: larp6a
location: join(585090..585625,590990..591197,598953..600556)
location: region:585090-600556:1
so has part: feature:585090-585625:1:exon
so has part: feature:590990-591197:1:exon
so has part: feature:598953-600556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585090-585625:1:exon

position:585625:1
position: 585625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:590990-591197:1:exon

position:590990:1
position: 590990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591197:1
position: 591197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:598953-600556:1:exon

position:598953:1
position: 598953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

larp6a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: larp6a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 6a
translation: MYGLQSAFLRWAVFLVPPPLRESLLPGGWIFSPGPSPSPRPRPRNRWSDSAPAGLQPQAPAPAPAQAPPRGGRREVPAGHIPPSAAAAAAALPLGGLAALRRLWLGLTGTPALPRRPPMEETEPPGPQLPPPGEAPRPPPAVRIQVAPAEEETPSPPHSGQPSPGEAEKPSASFSGAENDLDELDSDWRSPDPELMQKLIAQIEYYLSDENLEKDAFLLKHVRRNKMGYVSVKLLTSFKKVKHLTRDWQTTAFALKHSQLLELNEEGRKVRRKTAVPVFPSENLPSRMLLVHDMHVCPEFQVLNQNQESENGGLQEKVMEYILKAFGLFGTISSVRVLKPGKELPADVKRLSNRYSQLGIKECVIVEFEDVESAIKAHESLGKTDEGMKVVLIGMKPRKKKVVREKTKEAEDVKNGSKSKSANKRVEELQYVGEDSSAYSSSEPESNPASPMLSRKLKPNNQLSPNTYQNNHLSPNASPRSSPWNSPRSSPSIQRKNTISRKSPLTGDAKLTAATSPEVGSKWTDYSSDSSNTPSGSPWVQRRKQAQVISHENSPVDSPMLSRKMHNAGGLPQGVVRLPRGPDGTKGFQTLTERSKPLVI
SIO_010081: larp6a
subclass of: SO_0000673
so part of: larp6a
location: join(585114..585625,590990..591197,598953..600035)
location: region:585114-600035:1
so has part: feature:585114-585625:1:exon
so has part: feature:590990-591197:1:exon
so has part: feature:598953-600035:1:exon

XP_041034499.1
type: Protein
SIO_000068: ncbiprotein

position:585114:1
position: 585114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600035:1
position: 600035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585114-585625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590990-591197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:598953-600035:1:exon

LOC121272113
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272113
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(595540..598879)
location: region:595540-598879:-1
so has part: feature:595540-598879:-1:exon
subclass of: SO_0000011

121272113
type: Gene
SIO_000068: ncbigene

position:595540:-1
position: 595540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598879:-1
position: 598879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595540-598879:-1:exon

LOC121272113
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13397
nc RNA class: lncRNA
gene: LOC121272113
product: uncharacterized LOC121272113
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005941850.1
SIO_010081: LOC121272113
subclass of: SO_0000673
so part of: LOC121272113
location: complement(join(595540..596293,598323..598879))
location: region:595540-598879:-1
so has part: feature:598323-598879:-1:exon
so has part: feature:595540-596293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598323-598879:-1:exon

position:598323:-1
position: 598323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595540-596293:-1:exon

position:596293:-1
position: 596293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tm2d3
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(603257..623639)
location: region:603257-623639:-1
so has part: feature:603257-623639:-1:exon
subclass of: SO_0000010

121272111
type: Gene
SIO_000068: ncbigene

position:603257:-1
position: 603257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623639:-1
position: 623639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603257-623639:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: tm2d3
product: TM2 domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178560.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(603257..603360,610408..610514,615195..615270,615987..616161,622559..622716,622910..623005,623519..623639))
location: region:603257-623639:-1
so has part: feature:623519-623639:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:610408-610514:-1:exon
so has part: feature:603257-603360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623639:-1:exon

position:623519:-1
position: 623519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

position:622910:-1
position: 622910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623005:-1
position: 623005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

position:622559:-1
position: 622559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622716:-1
position: 622716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

position:615987:-1
position: 615987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616161:-1
position: 616161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

position:615195:-1
position: 615195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615270:-1
position: 615270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:610408-610514:-1:exon

position:610408:-1
position: 610408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610514:-1
position: 610514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:603257-603360:-1:exon

position:603360:-1
position: 603360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X4
translation: MAVWKLLDRFLVLWQLLGLLRGDSLSTKEPDGMLSPKDAVFPSTLGTTPAHLADSITTEPSYLSKCPSAGLCVKLDPVCMNCMQLWNCTYGKDVSFNCTVKPRVHCTDENKVEQKTFQITMICRFCWQLPPTEYQCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSSDLLGALSNNFWKSYLTNIHRHFLIYRVNYLKKNSDTLNLHPLYKAISPLQCRNVCSVEVSRLL
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(603272..603360,610408..610514,615195..615270,615987..616161,622559..622716,622910..623005,623519..623585))
location: region:603272-623585:-1
so has part: feature:623519-623585:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:610408-610514:-1:exon
so has part: feature:603272-603360:-1:exon

XP_041034494.1
type: Protein
SIO_000068: ncbiprotein

position:603272:-1
position: 603272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623585:-1
position: 623585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610408-610514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:603272-603360:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: tm2d3
product: TM2 domain containing 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178563.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(603807..605409,605997..606089,615195..615270,615987..616161,622559..622716,623519..623630))
location: region:603807-623630:-1
so has part: feature:623519-623630:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:605997-606089:-1:exon
so has part: feature:603807-605409:-1:exon

position:603807:-1
position: 603807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623630:-1
position: 623630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605997-606089:-1:exon

position:605997:-1
position: 605997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606089:-1
position: 606089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:603807-605409:-1:exon

position:605409:-1
position: 605409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: tm2d3
product: TM2 domain containing 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178562.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(603860..605409,615195..615270,615987..616161,622559..622716,622910..623005,623519..623639))
location: region:603860-623639:-1
so has part: feature:623519-623639:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:603860-605409:-1:exon

position:603860:-1
position: 603860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603860-605409:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: tm2d3
product: TM2 domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178556.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(603860..605409,605997..606089,615195..615270,615987..616161,622559..622716,622910..623005,623519..623639))
location: region:603860-623639:-1
so has part: feature:623519-623639:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:605997-606089:-1:exon
so has part: feature:603860-605409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605997-606089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:603860-605409:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: tm2d3
product: TM2 domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178558.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(603860..605409,610408..610511,615195..615270,615987..616161,622559..622716,622910..623005,623519..623639))
location: region:603860-623639:-1
so has part: feature:623519-623639:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:610408-610511:-1:exon
so has part: feature:603860-605409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610408-610511:-1:exon

position:610511:-1
position: 610511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:603860-605409:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: tm2d3
product: TM2 domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178557.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(603860..605409,610408..610514,615195..615270,615987..616161,622559..622716,622910..623005,623519..623639))
location: region:603860-623639:-1
so has part: feature:623519-623639:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:610408-610514:-1:exon
so has part: feature:603860-605409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610408-610514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:603860-605409:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X7
translation: MAVWKLLDRFLVLWQLLGLLRGAITTEPSYLSKCPSAGLCVKLDPVCMNCMQLWNCTYGKDVSFNCTVKPRVHCTDENKVEQKTFQITMICRFCWQLPPTEYQCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALRFPAFRIFRFWLYFWQNLGQSSGCQRRFMNASITLGGFGADRFYLGQWKEGLGKLFSFGGLGIWTLIDVLLIGIGYVGPADGSLYI
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(605244..605409,605997..606089,615195..615270,615987..616161,622559..622716,623519..623585))
location: region:605244-623585:-1
so has part: feature:623519-623585:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:605997-606089:-1:exon
so has part: feature:605244-605409:-1:exon

XP_041034497.1
type: Protein
SIO_000068: ncbiprotein

position:605244:-1
position: 605244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605997-606089:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605244-605409:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X6
translation: MAVWKLLDRFLVLWQLLGLLRGDSLSTKEPDGMLSPKDAVFPSTLGTTPAHLADSITTEPSYLSKCPSAGLCVKLDPVCMNCMQLWNCTYGKDVSFNCTVKPRVHCTDENKVEQKTFQITMICRFCWQLPPTEYQCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSITLGGFGADRFYLGQWKEGLGKLFSFGGLGIWTLIDVLLIGIGYVGPADGSLYI
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(605244..605409,615195..615270,615987..616161,622559..622716,622910..623005,623519..623585))
location: region:605244-623585:-1
so has part: feature:623519-623585:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:605244-605409:-1:exon

XP_041034496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605244-605409:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X1
translation: MAVWKLLDRFLVLWQLLGLLRGDSLSTKEPDGMLSPKDAVFPSTLGTTPAHLADSITTEPSYLSKCPSAGLCVKLDPVCMNCMQLWNCTYGKDVSFNCTVKPRVHCTDENKVEQKTFQITMICRFCWQLPPTEYQCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALRFPAFRIFRFWLYFWQNLGQSSGCQRRFMNASITLGGFGADRFYLGQWKEGLGKLFSFGGLGIWTLIDVLLIGIGYVGPADGSLYI
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(605244..605409,605997..606089,615195..615270,615987..616161,622559..622716,622910..623005,623519..623585))
location: region:605244-623585:-1
so has part: feature:623519-623585:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:605997-606089:-1:exon
so has part: feature:605244-605409:-1:exon

XP_041034490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605997-606089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605244-605409:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: tm2d3
product: TM2 domain containing 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178561.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(605283..605409,605997..606089,610408..610514,615195..615270,615987..616161,622559..622716,622910..623005,623519..623639))
location: region:605283-623639:-1
so has part: feature:623519-623639:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:610408-610514:-1:exon
so has part: feature:605997-606089:-1:exon
so has part: feature:605283-605409:-1:exon

position:605283:-1
position: 605283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610408-610514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605997-606089:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605283-605409:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X3
translation: MAVWKLLDRFLVLWQLLGLLRGDSLSTKEPDGMLSPKDAVFPSTLGTTPAHLADSITTEPSYLSKCPSAGLCVKLDPVCMNCMQLWNCTYGKDVSFNCTVKPRVHCTDENKVEQKTFQITMICRFCWQLPPTEYQCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSDLLGALSNNFWKSYLTNIHRHFLIYRVNYLKKNSASHWEGLELIASIWASGRRVLANSSASEGLEYGR
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(605306..605409,610408..610511,615195..615270,615987..616161,622559..622716,622910..623005,623519..623585))
location: region:605306-623585:-1
so has part: feature:623519-623585:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:610408-610511:-1:exon
so has part: feature:605306-605409:-1:exon

XP_041034492.1
type: Protein
SIO_000068: ncbiprotein

position:605306:-1
position: 605306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610408-610511:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605306-605409:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X2
translation: MAVWKLLDRFLVLWQLLGLLRGDSLSTKEPDGMLSPKDAVFPSTLGTTPAHLADSITTEPSYLSKCPSAGLCVKLDPVCMNCMQLWNCTYGKDVSFNCTVKPRVHCTDENKVEQKTFQITMICRFCWQLPPTEYQCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSSDLLGALSNNFWKSYLTNIHRHFLIYRVNYLKKNSASHWEGLELIASIWASGRRVLANSSASEGLEYGR
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(605306..605409,610408..610514,615195..615270,615987..616161,622559..622716,622910..623005,623519..623585))
location: region:605306-623585:-1
so has part: feature:623519-623585:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:610408-610514:-1:exon
so has part: feature:605306-605409:-1:exon

XP_041034491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610408-610514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605306-605409:-1:exon

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X5
translation: MAVWKLLDRFLVLWQLLGLLRGDSLSTKEPDGMLSPKDAVFPSTLGTTPAHLADSITTEPSYLSKCPSAGLCVKLDPVCMNCMQLWNCTYGKDVSFNCTVKPRVHCTDENKVEQKTFQITMICRFCWQLPPTEYQCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSSDLLGALSNNFWKSYLTNIHRHFLIYRVNYLKKNSDFQHSEYFVFGFIFGRIWGRAVGVKGGL
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(606004..606089,610408..610514,615195..615270,615987..616161,622559..622716,622910..623005,623519..623585))
location: region:606004-623585:-1
so has part: feature:623519-623585:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:610408-610514:-1:exon
so has part: feature:606004-606089:-1:exon

XP_041034495.1
type: Protein
SIO_000068: ncbiprotein

position:606004:-1
position: 606004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610408-610514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606004-606089:-1:exon

tm2d3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: tm2d3
product: TM2 domain containing 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178564.1
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(609297..609905,610408..610514,615195..615270,615987..616161,622559..622716,622910..623005,623519..623639))
location: region:609297-623639:-1
so has part: feature:623519-623639:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:610408-610514:-1:exon
so has part: feature:609297-609905:-1:exon

position:609297:-1
position: 609297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610408-610514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609297-609905:-1:exon

position:609905:-1
position: 609905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

tm2d3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: tm2d3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 3 isoform X8
translation: MAVWKLLDRFLVLWQLLGLLRGDSLSTKEPDGMLSPKDAVFPSTLGTTPAHLADSITTEPSYLSKCPSAGLCVKLDPVCMNCMQLWNCTYGKDVSFNCTVKPRVHCTDENKVEQKTFQITMICRFCWQLPPTEYQCKETTKCKTVQCPREYFISNCTTLEHVHCLGNRTFQKKMYCNWTGGYKWSTALALSSDLLGALSNNFWKSYLTNIHRHFLIYRVNYLKKNSEPGSGK
SIO_010081: tm2d3
subclass of: SO_0000673
so part of: tm2d3
location: complement(join(609886..609905,610408..610514,615195..615270,615987..616161,622559..622716,622910..623005,623519..623585))
location: region:609886-623585:-1
so has part: feature:623519-623585:-1:exon
so has part: feature:622910-623005:-1:exon
so has part: feature:622559-622716:-1:exon
so has part: feature:615987-616161:-1:exon
so has part: feature:615195-615270:-1:exon
so has part: feature:610408-610514:-1:exon
so has part: feature:609886-609905:-1:exon

XP_041034498.1
type: Protein
SIO_000068: ncbiprotein

position:609886:-1
position: 609886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622910-623005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622559-622716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615987-616161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615195-615270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610408-610514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609886-609905:-1:exon

LOC121272101
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(645293..687871)
location: region:645293-687871:-1
so has part: feature:645293-687871:-1:exon
subclass of: SO_0000010

121272101
type: Gene
SIO_000068: ncbigene

position:645293:-1
position: 645293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687871:-1
position: 687871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645293-687871:-1:exon

LOC121272101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272101
product: threonine--tRNA ligase 1, cytoplasmic-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178546.1
SIO_010081: LOC121272101
subclass of: SO_0000673
so part of: LOC121272101
location: complement(join(645293..645828,647175..647289,647367..647439,651716..651820,652416..652516,652598..652675,653460..653597,654192..654354,661482..661648,669328..669426,677453..677599,677729..677807,679441..679505,680202..680319,680917..681038,681466..681589,683685..683875,684215..684304,687589..687871))
location: region:645293-687871:-1
so has part: feature:687589-687871:-1:exon
so has part: feature:684215-684304:-1:exon
so has part: feature:683685-683875:-1:exon
so has part: feature:681466-681589:-1:exon
so has part: feature:680917-681038:-1:exon
so has part: feature:680202-680319:-1:exon
so has part: feature:679441-679505:-1:exon
so has part: feature:677729-677807:-1:exon
so has part: feature:677453-677599:-1:exon
so has part: feature:669328-669426:-1:exon
so has part: feature:661482-661648:-1:exon
so has part: feature:654192-654354:-1:exon
so has part: feature:653460-653597:-1:exon
so has part: feature:652598-652675:-1:exon
so has part: feature:652416-652516:-1:exon
so has part: feature:651716-651820:-1:exon
so has part: feature:647367-647439:-1:exon
so has part: feature:647175-647289:-1:exon
so has part: feature:645293-645828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:687589-687871:-1:exon

position:687589:-1
position: 687589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:684215-684304:-1:exon

position:684215:-1
position: 684215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684304:-1
position: 684304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:683685-683875:-1:exon

position:683685:-1
position: 683685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683875:-1
position: 683875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:681466-681589:-1:exon

position:681466:-1
position: 681466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681589:-1
position: 681589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:680917-681038:-1:exon

position:680917:-1
position: 680917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681038:-1
position: 681038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:680202-680319:-1:exon

position:680202:-1
position: 680202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680319:-1
position: 680319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:679441-679505:-1:exon

position:679441:-1
position: 679441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679505:-1
position: 679505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:677729-677807:-1:exon

position:677729:-1
position: 677729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677807:-1
position: 677807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:677453-677599:-1:exon

position:677453:-1
position: 677453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677599:-1
position: 677599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:669328-669426:-1:exon

position:669328:-1
position: 669328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669426:-1
position: 669426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:661482-661648:-1:exon

position:661482:-1
position: 661482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661648:-1
position: 661648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:654192-654354:-1:exon

position:654192:-1
position: 654192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654354:-1
position: 654354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:653460-653597:-1:exon

position:653460:-1
position: 653460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653597:-1
position: 653597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:652598-652675:-1:exon

position:652598:-1
position: 652598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652675:-1
position: 652675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:652416-652516:-1:exon

position:652416:-1
position: 652416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652516:-1
position: 652516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:651716-651820:-1:exon

position:651716:-1
position: 651716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651820:-1
position: 651820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:647367-647439:-1:exon

position:647367:-1
position: 647367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647439:-1
position: 647439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:647175-647289:-1:exon

position:647175:-1
position: 647175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647289:-1
position: 647289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:645293-645828:-1:exon

position:645828:-1
position: 645828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121272101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: threonine--tRNA ligase 1, cytoplasmic-like
translation: MAAMAVFELRLAGQEAQLRELGAAMERLQRGDEELVVGPELQSLREENEKLKYRRLHLERSLRAELGSGQPSGRASPREIRASGAQTDADSQQLARQLKNKKEERSPTRGEAKSIEWSEWPSYVEERLRLYESLKRERDSILSERAARHSRIITITMPNSTEIRGESWKTTPYQVACQISWRLAESSIIAKVDGELWDLDRPLEGDTSLELLNFEDPEARAVYWHSSAHILGEAMERYYGGCLCYGPPIETGFYYDVFLGDRGVSSGEFPDLENICKSIMEDCQSFERLEVSKQTLLEMFKYDKFKVRILNEKVDTLTTTVYRCGPLIDLCRGPHIRHTGKIKALRIYKNSSTHWEGNANMETLQRIYGISFPDGKMLKEWERLQEEAKNRDHRKIGREQELFFFHELSPGSCFFLPRGTSIYNTLTAFIREEYHRRGFTEVVSPNIYNSRLWEVSGHWQHNSESMFSFEVEKEVFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHHNEPLGALSGLTRVRRFEQDDAHIFCTIEQIEEEIRGCLDFLRSVYGVFGFSFQLNLSTRAEKFLGDVNLWQQAEKQLECSLNKFGECWRLSEGDEALCGPKIDIEIKDAVGQYHQCATIQLDFQLPIKFNLTYVSKDGMDGSRPVIIHRAVLGSLGHMVAILAENYAGKWPFWLSPRQIMVIPVVPGCEEYGRMVCQEFVEAGFMADVDLDPGCLLNKKIRDSQLAQYNFILVVGEREKVNHSVNVHTRDNKVHGELSVGATIEKMKRLQQLRKVRAEEEF
SIO_010081: LOC121272101
subclass of: SO_0000673
so part of: LOC121272101
location: complement(join(645680..645828,647175..647289,647367..647439,651716..651820,652416..652516,652598..652675,653460..653597,654192..654354,661482..661648,669328..669426,677453..677599,677729..677807,679441..679505,680202..680319,680917..681038,681466..681589,683685..683875,684215..684304,687589..687846))
location: region:645680-687846:-1
so has part: feature:687589-687846:-1:exon
so has part: feature:684215-684304:-1:exon
so has part: feature:683685-683875:-1:exon
so has part: feature:681466-681589:-1:exon
so has part: feature:680917-681038:-1:exon
so has part: feature:680202-680319:-1:exon
so has part: feature:679441-679505:-1:exon
so has part: feature:677729-677807:-1:exon
so has part: feature:677453-677599:-1:exon
so has part: feature:669328-669426:-1:exon
so has part: feature:661482-661648:-1:exon
so has part: feature:654192-654354:-1:exon
so has part: feature:653460-653597:-1:exon
so has part: feature:652598-652675:-1:exon
so has part: feature:652416-652516:-1:exon
so has part: feature:651716-651820:-1:exon
so has part: feature:647367-647439:-1:exon
so has part: feature:647175-647289:-1:exon
so has part: feature:645680-645828:-1:exon

XP_041034480.1
type: Protein
SIO_000068: ncbiprotein

position:645680:-1
position: 645680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687846:-1
position: 687846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687589-687846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684215-684304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683685-683875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681466-681589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:680917-681038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:680202-680319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679441-679505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:677729-677807:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:677453-677599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:669328-669426:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661482-661648:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654192-654354:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:653460-653597:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:652598-652675:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:652416-652516:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:651716-651820:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:647367-647439:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:647175-647289:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:645680-645828:-1:exon

LOC121272101
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13397
gene: LOC121272101
product: threonine--tRNA ligase 1, cytoplasmic-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005941848.1
SIO_010081: LOC121272101
so part of: LOC121272101
location: complement(join(645692..645828,647175..647289,647367..647439,651716..651816,652416..652516,652598..652675,653460..653597,654192..654354,661482..661648,669328..669426,677453..677599,677729..677807,679441..679505,680202..680319,680917..681038,681466..681589,683685..683875,684215..684304,687589..687871))
location: region:645692-687871:-1
so has part: feature:687589-687871:-1:exon
so has part: feature:684215-684304:-1:exon
so has part: feature:683685-683875:-1:exon
so has part: feature:681466-681589:-1:exon
so has part: feature:680917-681038:-1:exon
so has part: feature:680202-680319:-1:exon
so has part: feature:679441-679505:-1:exon
so has part: feature:677729-677807:-1:exon
so has part: feature:677453-677599:-1:exon
so has part: feature:669328-669426:-1:exon
so has part: feature:661482-661648:-1:exon
so has part: feature:654192-654354:-1:exon
so has part: feature:653460-653597:-1:exon
so has part: feature:652598-652675:-1:exon
so has part: feature:652416-652516:-1:exon
so has part: feature:651716-651816:-1:exon
so has part: feature:647367-647439:-1:exon
so has part: feature:647175-647289:-1:exon
so has part: feature:645692-645828:-1:exon

position:645692:-1
position: 645692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687589-687871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684215-684304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683685-683875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681466-681589:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:680917-681038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:680202-680319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679441-679505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:677729-677807:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:677453-677599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:669328-669426:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661482-661648:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654192-654354:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:653460-653597:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:652598-652675:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:652416-652516:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:651716-651816:-1:exon

position:651816:-1
position: 651816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:647367-647439:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:647175-647289:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:645692-645828:-1:exon

LOC121272117
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1060099..1222222
location: region:1060099-1222222:1
so has part: feature:1060099-1222222:1:exon
subclass of: SO_0000010

121272117
type: Gene
SIO_000068: ncbigene

position:1060099:1
position: 1060099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222222:1
position: 1222222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060099-1222222:1:exon

LOC121272117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272117
product: tight junction protein ZO-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178570.1
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1060099..1060357,1062187..1062289,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219357,1221112..1222222)
location: region:1060099-1222222:1
so has part: feature:1060099-1060357:1:exon
so has part: feature:1062187-1062289:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219357:1:exon
so has part: feature:1221112-1222222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060099-1060357:1:exon

position:1060357:1
position: 1060357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1062187-1062289:1:exon

position:1062187:1
position: 1062187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062289:1
position: 1062289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1157253-1157309:1:exon

position:1157253:1
position: 1157253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157309:1
position: 1157309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1160694-1160818:1:exon

position:1160694:1
position: 1160694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160818:1
position: 1160818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1161511-1161613:1:exon

position:1161511:1
position: 1161511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161613:1
position: 1161613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1163034-1163325:1:exon

position:1163034:1
position: 1163034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163325:1
position: 1163325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1165432-1165535:1:exon

position:1165432:1
position: 1165432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165535:1
position: 1165535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1166871-1167039:1:exon

position:1166871:1
position: 1166871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167039:1
position: 1167039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1167455-1167602:1:exon

position:1167455:1
position: 1167455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167602:1
position: 1167602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1170265-1170425:1:exon

position:1170265:1
position: 1170265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170425:1
position: 1170425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1170802-1170907:1:exon

position:1170802:1
position: 1170802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1170907:1
position: 1170907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1174425-1174575:1:exon

position:1174425:1
position: 1174425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174575:1
position: 1174575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1175118-1175226:1:exon

position:1175118:1
position: 1175118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175226:1
position: 1175226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1175512-1175731:1:exon

position:1175512:1
position: 1175512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175731:1
position: 1175731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1176760-1176944:1:exon

position:1176760:1
position: 1176760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176944:1
position: 1176944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1178396-1178491:1:exon

position:1178396:1
position: 1178396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178491:1
position: 1178491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1180193-1180275:1:exon

position:1180193:1
position: 1180193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180275:1
position: 1180275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1180370-1180580:1:exon

position:1180370:1
position: 1180370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180580:1
position: 1180580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1182361-1182461:1:exon

position:1182361:1
position: 1182361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182461:1
position: 1182461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1183261-1183602:1:exon

position:1183261:1
position: 1183261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183602:1
position: 1183602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1185638-1185907:1:exon

position:1185638:1
position: 1185638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185907:1
position: 1185907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1187931-1188806:1:exon

position:1187931:1
position: 1187931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188806:1
position: 1188806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1192712-1192812:1:exon

position:1192712:1
position: 1192712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192812:1
position: 1192812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1195426-1195644:1:exon

position:1195426:1
position: 1195426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195644:1
position: 1195644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1203846-1204015:1:exon

position:1203846:1
position: 1203846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204015:1
position: 1204015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1205590-1206049:1:exon

position:1205590:1
position: 1205590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1206049:1
position: 1206049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1213851-1214065:1:exon

position:1213851:1
position: 1213851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214065:1
position: 1214065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1219214-1219357:1:exon

position:1219214:1
position: 1219214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219357:1
position: 1219357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1221112-1222222:1:exon

position:1221112:1
position: 1221112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121272117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272117
product: tight junction protein ZO-1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178576.1
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1060099..1060357,1062187..1062289,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219297,1221112..1222222)
location: region:1060099-1222222:1
so has part: feature:1060099-1060357:1:exon
so has part: feature:1062187-1062289:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219297:1:exon
so has part: feature:1221112-1222222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060099-1060357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062187-1062289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1219214-1219297:1:exon

position:1219297:1
position: 1219297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1221112-1222222:1:exon

LOC121272117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272117
product: tight junction protein ZO-1-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178577.1
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1060099..1060357,1062187..1062289,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219357,1221112..1222222)
location: region:1060099-1222222:1
so has part: feature:1060099-1060357:1:exon
so has part: feature:1062187-1062289:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219357:1:exon
so has part: feature:1221112-1222222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060099-1060357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062187-1062289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1219214-1219357:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221112-1222222:1:exon

LOC121272117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272117
product: tight junction protein ZO-1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178574.1
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1060099..1060357,1124660..1124725,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219357,1221112..1222222)
location: region:1060099-1222222:1
so has part: feature:1060099-1060357:1:exon
so has part: feature:1124660-1124725:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219357:1:exon
so has part: feature:1221112-1222222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060099-1060357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124660-1124725:1:exon

position:1124660:1
position: 1124660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124725:1
position: 1124725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1219214-1219357:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1221112-1222222:1:exon

LOC121272117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272117
product: tight junction protein ZO-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178571.1
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1060099..1060357,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219357,1221112..1222222)
location: region:1060099-1222222:1
so has part: feature:1060099-1060357:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219357:1:exon
so has part: feature:1221112-1222222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060099-1060357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1219214-1219357:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221112-1222222:1:exon

LOC121272117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272117
product: tight junction protein ZO-1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178573.1
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1060100..1060357,1062187..1062289,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219318,1221112..1222222)
location: region:1060100-1222222:1
so has part: feature:1060100-1060357:1:exon
so has part: feature:1062187-1062289:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219318:1:exon
so has part: feature:1221112-1222222:1:exon

position:1060100:1
position: 1060100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060100-1060357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062187-1062289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1219214-1219318:1:exon

position:1219318:1
position: 1219318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1221112-1222222:1:exon

LOC121272117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X2
translation: MSARAAGAAGKNTVMEETVIWEQQTVTLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEMYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNRSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGSQRSREDDVIRGAKAGAMSTPVKNTEEMFVVKAAEEPVAAVADERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPSDAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGHQILRVNNVDFANIIREEAVLFLLDLPKGEEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYEKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREEPDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLCPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGTAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPTESAITRSSEPVREDSSMMHPDSMAQAFPSYPVQVQRVDSPVYKPLANQPKADIPPAVPNSSQQLESISVVTVPSTVNTTVDLINVRLEEIASPPHSNPEPQIDPYSKPSPEPSRVIHSVSPERLRDPEPTATRTAEPTKMYKKDSYNNELPRQNYDIKQPVGNHPVLRIDKERQAYDPQQQHFEEQPPYRQESQAKYEQQLSPGYGPVSHYHENPPSYDEKWLHYNEKPTQHYQPPPYFEDQHPRDYDPKHIEHYLDHDYQPVHEEPPPTNYENRLPHYDKPFKSYKPQQPHYNDQPLHGYDPRPRYEHNPQAFHPPVSRSPEPQQQYFDSQVRTYDQGQSQGYNSLPRQFELVHNTDASFPPPPALHSKAAESLHSVSKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKIKDPTEVIPVRPPEVAPKPVLVPVAASKPIIQPTPEQEKPSHLYRGPEPQVKLLEEAPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVTQLPASSFPESAKSSEPVLQSNYTGYLPRSTAANFDHAVKPTITEKKYDSTSQLSSLQSRYGPPLQPSLNSSVSLPVHPKLSPTEVSSVPRDIPSILQSKPELPPQSKPQAFRLTARDETVHSNFYPQKSFPVPERAPVNGMEQPQKQAATAYNRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1060325..1060357,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219357,1221112..1221206)
location: region:1060325-1221206:1
so has part: feature:1060325-1060357:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219357:1:exon
so has part: feature:1221112-1221206:1:exon

XP_041034505.1
type: Protein
SIO_000068: ncbiprotein

position:1060325:1
position: 1060325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221206:1
position: 1221206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060325-1060357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1219214-1219357:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221112-1221206:1:exon

LOC121272117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X1
translation: MELASTTINMFVKNGNTVMEETVIWEQQTVTLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEMYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNRSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGSQRSREDDVIRGAKAGAMSTPVKNTEEMFVVKAAEEPVAAVADERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPSDAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGHQILRVNNVDFANIIREEAVLFLLDLPKGEEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYEKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREEPDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLCPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGTAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPTESAITRSSEPVREDSSMMHPDSMAQAFPSYPVQVQRVDSPVYKPLANQPKADIPPAVPNSSQQLESISVVTVPSTVNTTVDLINVRLEEIASPPHSNPEPQIDPYSKPSPEPSRVIHSVSPERLRDPEPTATRTAEPTKMYKKDSYNNELPRQNYDIKQPVGNHPVLRIDKERQAYDPQQQHFEEQPPYRQESQAKYEQQLSPGYGPVSHYHENPPSYDEKWLHYNEKPTQHYQPPPYFEDQHPRDYDPKHIEHYLDHDYQPVHEEPPPTNYENRLPHYDKPFKSYKPQQPHYNDQPLHGYDPRPRYEHNPQAFHPPVSRSPEPQQQYFDSQVRTYDQGQSQGYNSLPRQFELVHNTDASFPPPPALHSKAAESLHSVSKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKIKDPTEVIPVRPPEVAPKPVLVPVAASKPIIQPTPEQEKPSHLYRGPEPQVKLLEEAPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVTQLPASSFPESAKSSEPVLQSNYTGYLPRSTAANFDHAVKPTITEKKYDSTSQLSSLQSRYGPPLQPSLNSSVSLPVHPKLSPTEVSSVPRDIPSILQSKPELPPQSKPQAFRLTARDETVHSNFYPQKSFPVPERAPVNGMEQPQKQAATAYNRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1062245..1062289,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219357,1221112..1221206)
location: region:1062245-1221206:1
so has part: feature:1062245-1062289:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219357:1:exon
so has part: feature:1221112-1221206:1:exon

XP_041034504.1
type: Protein
SIO_000068: ncbiprotein

position:1062245:1
position: 1062245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062245-1062289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1219214-1219357:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221112-1221206:1:exon

LOC121272117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X3
translation: MELASTTINMFVKNGNTVMEETVIWEQQTVTLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEMYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNRSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGSQRSREDDVIRGAKAGAMSTPVKNTEEMFVVKAAEEPVAAVADERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPSDAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGHQILRVNNVDFANIIREEAVLFLLDLPKGEEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYEKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREEPDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLCPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGTAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPTESAITRSSEPVREDSSMMHPDSMAQAFPSYPVQVQRVDSPVYKPLANQPKADIPPAVPNSSQQLESISVVTVPSTVNTTVDLINVRLEEIASPPHSNPEPQIDPYSKPSPEPSRVIHSVSPERLRDPEPTATRTAEPTKMYKKDSYNNELPRQNYDIKQPVGNHPVLRIDKERQAYDPQQQHFEEQPPYRQESQAKYEQQLSPGYGPVSHYHENPPSYDEKWLHYNEKPTQHYQPPPYFEDQHPRDYDPKHIEHYLDHDYQPVHEEPPPTNYENRLPHYDKPFKSYKPQQPHYNDQPLHGYDPRPRYEHNPQAFHPPVSRSPEPQQQYFDSQVRTYDQGQSQGYNSLPRQFELVHNTDASFPPPPALHSKAAESLHSVSKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKIKDPTEVIPVRPPEVAPKPVLVPVAASKPIIQPTPEQEKPSHLYRGPEPQVKLLEEAPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVTQLPASSFPESAKSSEPVLQSNYTGYLPRSTAANFDHAVKPTITEKKYDSTSQLSSLQSRYGPPLQPSLNSSVSLPVHPKLSPTEVSSVPRDIPSILQSKPELPPQSKPQAFRLTARDETVHSNFYPQKSFPVPERAPVNGMEQPQKQAATAYNRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1062245..1062289,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219318,1221112..1221206)
location: region:1062245-1221206:1
so has part: feature:1062245-1062289:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219318:1:exon
so has part: feature:1221112-1221206:1:exon

XP_041034507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1062245-1062289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1219214-1219318:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221112-1221206:1:exon

LOC121272117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X5
translation: MELASTTINMFVKNGNTVMEETVIWEQQTVTLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEMYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNRSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGSQRSREDDVIRGAKAGAMSTPVKNTEEMFVVKAAEEPVAAVADERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPSDAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGHQILRVNNVDFANIIREEAVLFLLDLPKGEEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYEKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREEPDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLCPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGTAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPTESAITRSSEPVREDSSMMHPDSMAQAFPSYPVQVQRVDSPVYKPLANQPKADIPPAVPNSSQQLESISVVTVPSTVNTTVDLINVRLEEIASPPHSNPEPQIDPYSKPSPEPSRVIHSVSPERLRDPEPTATRTAEPTKMYKKDSYNNELPRQNYDIKQPVGNHPVLRIDKERQAYDPQQQHFEEQPPYRQESQAKYEQQLSPGYGPVSHYHENPPSYDEKWLHYNEKPTQHYQPPPYFEDQHPRDYDPKHIEHYLDHDYQPVHEEPPPTNYENRLPHYDKPFKSYKPQQPHYNDQPLHGYDPRPRYEHNPQAFHPPVSRSPEPQQQYFDSQVRTYDQGQSQGYNSLPRQFELVHNTDASFPPPPALHSKAAESLHSVSKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKIKDPTEVIPVRPPEVAPKPVLVPVAASKPIIQPTPEQEKPSHLYRGPEPQVKLLEEAPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVTQLPASSFPESAKSSEPVLQSNYTGYLPRSTAANFDHAVKPTITEKKYDSTSQLSSLQSRYGPPLQPSLNSSVSLPVHPKLSPTEVSSVPRDIPSILQSKPELPPQSKPQAFRLTARDETVHSNFYPQKSFPVPERAPVNGMEQPQKQAATAYNRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1062245..1062289,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219297,1221112..1221206)
location: region:1062245-1221206:1
so has part: feature:1062245-1062289:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219297:1:exon
so has part: feature:1221112-1221206:1:exon

XP_041034510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1062245-1062289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1219214-1219297:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221112-1221206:1:exon

LOC121272117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X6
translation: MELASTTINMFVKNGNTVMEETVIWEQQTVTLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEMYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNRSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGSQRSREDDVIRGAKAGAMSTPVKNTEEMFVVKAAEEPVAAVADERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPSDAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGHQILRVNNVDFANIIREEAVLFLLDLPKGEEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYEKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREEPDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLCPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGTAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPTESAITRSSEPVREDSSMMHPDSMAQAFPSYPVQVQRVDSPVYKPLANQPMYKKDSYNNELPRQNYDIKQPVGNHPVLRIDKERQAYDPQQQHFEEQPPYRQESQAKYEQQLSPGYGPVSHYHENPPSYDEKWLHYNEKPTQHYQPPPYFEDQHPRDYDPKHIEHYLDHDYQPVHEEPPPTNYENRLPHYDKPFKSYKPQQPHYNDQPLHGYDPRPRYEHNPQAFHPPVSRSPEPQQQYFDSQVRTYDQGQSQGYNSLPRQFELVHNTDASFPPPPALHSKAAESLHSVSKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKIKDPTEVIPVRPPEVAPKPVLVPVAASKPIIQPTPEQEKPSHLYRGPEPQVKLLEEAPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVTQLPASSFPESAKSSEPVLQSNYTGYLPRSTAANFDHAVKPTITEKKYDSTSQLSSLQSRYGPPLQPSLNSSVSLPVHPKLSPTEVSSVPRDIPSILQSKPELPPQSKPQAFRLTARDETVHSNFYPQKSFPVPERAPVNGMEQPQKQAATAYNRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1062245..1062289,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219357,1221112..1221206)
location: region:1062245-1221206:1
so has part: feature:1062245-1062289:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219357:1:exon
so has part: feature:1221112-1221206:1:exon

XP_041034511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1062245-1062289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1219214-1219357:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1221112-1221206:1:exon

LOC121272117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272117
product: tight junction protein ZO-1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178575.1
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1142485..1142495,1157253..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219357,1221112..1222222)
location: region:1142485-1222222:1
so has part: feature:1142485-1142495:1:exon
so has part: feature:1157253-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219357:1:exon
so has part: feature:1221112-1222222:1:exon

position:1142485:1
position: 1142485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1142485-1142495:1:exon

position:1142495:1
position: 1142495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1157253-1157309:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1219214-1219357:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1221112-1222222:1:exon

LOC121272117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X4
translation: MEETVIWEQQTVTLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEMYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNRSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGSQRSREDDVIRGAKAGAMSTPVKNTEEMFVVKAAEEPVAAVADERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPSDAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGHQILRVNNVDFANIIREEAVLFLLDLPKGEEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYEKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREEPDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLCPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGTAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPTESAITRSSEPVREDSSMMHPDSMAQAFPSYPVQVQRVDSPVYKPLANQPKADIPPAVPNSSQQLESISVVTVPSTVNTTVDLINVRLEEIASPPHSNPEPQIDPYSKPSPEPSRVIHSVSPERLRDPEPTATRTAEPTKMYKKDSYNNELPRQNYDIKQPVGNHPVLRIDKERQAYDPQQQHFEEQPPYRQESQAKYEQQLSPGYGPVSHYHENPPSYDEKWLHYNEKPTQHYQPPPYFEDQHPRDYDPKHIEHYLDHDYQPVHEEPPPTNYENRLPHYDKPFKSYKPQQPHYNDQPLHGYDPRPRYEHNPQAFHPPVSRSPEPQQQYFDSQVRTYDQGQSQGYNSLPRQFELVHNTDASFPPPPALHSKAAESLHSVSKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKIKDPTEVIPVRPPEVAPKPVLVPVAASKPIIQPTPEQEKPSHLYRGPEPQVKLLEEAPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVTQLPASSFPESAKSSEPVLQSNYTGYLPRSTAANFDHAVKPTITEKKYDSTSQLSSLQSRYGPPLQPSLNSSVSLPVHPKLSPTEVSSVPRDIPSILQSKPELPPQSKPQAFRLTARDETVHSNFYPQKSFPVPERAPVNGMEQPQKQAATAYNRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1157262..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219357,1221112..1221206)
location: region:1157262-1221206:1
so has part: feature:1157262-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219357:1:exon
so has part: feature:1221112-1221206:1:exon

XP_041034508.1
type: Protein
SIO_000068: ncbiprotein

position:1157262:1
position: 1157262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1157262-1157309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1219214-1219357:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1221112-1221206:1:exon

LOC121272117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-1-like isoform X4
translation: MEETVIWEQQTVTLHRAPGFGFGIAISGGKDNPHFQSGETSIVISDVLKGGPAEGLLHENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKRKIQMPVSRPEPDRQPISEPEDDSYEEEEMYDRKSGRSGPSPYSGRRSERSIGRREDSRERSLSPRSERRSVSSNLPPKPIKVTLVKSRKSEEYGLRLASHIFVKEISSEGLAAKDGNIHEGDVVLKINGTVTENMSLGDAKKLIERSKGKLKMVVQRDERATLLNVPDLDDSIPSANASERDDISEIHSLVSDHSNRSNERPRLRSRSRSPDKRSDWSDHSRHSPQPISNGSQRSREDDVIRGAKAGAMSTPVKNTEEMFVVKAAEEPVAAVADERTEKQAPPLPEPKPVYAQPGQPDVDLPVSPSDAPIPNSSHDDGMLRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGHQILRVNNVDFANIIREEAVLFLLDLPKGEEVTILAQQKKDVYRRIVESDVGDSFYIRTHFDYEKESPYGLSFNRGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNRNRAEQLSSVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVHTKFPAYERVVLREAGFLRPVVIFGPLADIAREKLAREEPDLYEIARSEPRDAGTDQRSSGIIRLHTIKQVIDRDKHAVLDITPNAVDRLNYAQWYPIVIFLNPDSKQGVKTMRQRLCPESRKSARKLFERALKLRKNNHHLFTSNINLNSMNEGWYGALKESVQQQQSQLVWVSEGKADGTAEDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDYDDTDTEGGAYTDQELDETLNDDIGPTESAITRSSEPVREDSSMMHPDSMAQAFPSYPVQVQRVDSPVYKPLANQPKADIPPAVPNSSQQLESISVVTVPSTVNTTVDLINVRLEEIASPPHSNPEPQIDPYSKPSPEPSRVIHSVSPERLRDPEPTATRTAEPTKMYKKDSYNNELPRQNYDIKQPVGNHPVLRIDKERQAYDPQQQHFEEQPPYRQESQAKYEQQLSPGYGPVSHYHENPPSYDEKWLHYNEKPTQHYQPPPYFEDQHPRDYDPKHIEHYLDHDYQPVHEEPPPTNYENRLPHYDKPFKSYKPQQPHYNDQPLHGYDPRPRYEHNPQAFHPPVSRSPEPQQQYFDSQVRTYDQGQSQGYNSLPRQFELVHNTDASFPPPPALHSKAAESLHSVSKPLPPLPGKPNVEEDVDPAMKPQSVLTRVKLFESKKSTSSKIKDPTEVIPVRPPEVAPKPVLVPVAASKPIIQPTPEQEKPSHLYRGPEPQVKLLEEAPRINHYSADEDEEDYRKQLSYFGRRTLEQKPVTQLPASSFPESAKSSEPVLQSNYTGYLPRSTAANFDHAVKPTITEKKYDSTSQLSSLQSRYGPPLQPSLNSSVSLPVHPKLSPTEVSSVPRDIPSILQSKPELPPQSKPQAFRLTARDETVHSNFYPQKSFPVPERAPVNGMEQPQKQAATAYNRFTPKPYTSAARPFERKFESPKFDHNLLPSEPQIQPKPEPLPKAHSSPQPPDFDSGTDTFPKPSDHRPKYQANNIHAIPKAIPVSPSALEDDDDDSHTVVATARGIFDSNGGVLSSVETGVSIIIPKGAIPEGVEQEIYFKVCRDNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSSGDPKSWQNKSLPGDPNYHVGTNCVSVLIDHF
SIO_010081: LOC121272117
subclass of: SO_0000673
so part of: LOC121272117
location: join(1157262..1157309,1160694..1160818,1161511..1161613,1163034..1163325,1165432..1165535,1166871..1167039,1167455..1167602,1170265..1170425,1170802..1170907,1174425..1174575,1175118..1175226,1175512..1175731,1176760..1176944,1178396..1178491,1180193..1180275,1180370..1180580,1182361..1182461,1183261..1183602,1185638..1185907,1187931..1188806,1192712..1192812,1195426..1195644,1203846..1204015,1205590..1206049,1213851..1214065,1219214..1219357,1221112..1221206)
location: region:1157262-1221206:1
so has part: feature:1157262-1157309:1:exon
so has part: feature:1160694-1160818:1:exon
so has part: feature:1161511-1161613:1:exon
so has part: feature:1163034-1163325:1:exon
so has part: feature:1165432-1165535:1:exon
so has part: feature:1166871-1167039:1:exon
so has part: feature:1167455-1167602:1:exon
so has part: feature:1170265-1170425:1:exon
so has part: feature:1170802-1170907:1:exon
so has part: feature:1174425-1174575:1:exon
so has part: feature:1175118-1175226:1:exon
so has part: feature:1175512-1175731:1:exon
so has part: feature:1176760-1176944:1:exon
so has part: feature:1178396-1178491:1:exon
so has part: feature:1180193-1180275:1:exon
so has part: feature:1180370-1180580:1:exon
so has part: feature:1182361-1182461:1:exon
so has part: feature:1183261-1183602:1:exon
so has part: feature:1185638-1185907:1:exon
so has part: feature:1187931-1188806:1:exon
so has part: feature:1192712-1192812:1:exon
so has part: feature:1195426-1195644:1:exon
so has part: feature:1203846-1204015:1:exon
so has part: feature:1205590-1206049:1:exon
so has part: feature:1213851-1214065:1:exon
so has part: feature:1219214-1219357:1:exon
so has part: feature:1221112-1221206:1:exon

XP_041034509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1157262-1157309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1160694-1160818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1161511-1161613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1163034-1163325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1165432-1165535:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1166871-1167039:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1167455-1167602:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1170265-1170425:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1170802-1170907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1174425-1174575:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1175118-1175226:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1175512-1175731:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1176760-1176944:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1178396-1178491:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1180193-1180275:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1180370-1180580:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1182361-1182461:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1183261-1183602:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1185638-1185907:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1187931-1188806:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1192712-1192812:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1195426-1195644:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1203846-1204015:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1205590-1206049:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1213851-1214065:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1219214-1219357:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1221112-1221206:1:exon

fam189a1
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1236188..1299888
location: region:1236188-1299888:1
so has part: feature:1236188-1299888:1:exon
subclass of: SO_0000010

121272042
type: Gene
SIO_000068: ncbigene

position:1236188:1
position: 1236188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299888:1
position: 1299888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1236188-1299888:1:exon

fam189a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: fam189a1
product: family with sequence similarity 189 member A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178427.1
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(1236188..1236421,1272071..1272127,1283708..1283818,1284144..1284275,1286914..1287021,1289702..1289862,1292067..1292202,1293898..1293991,1294696..1295184,1298019..1298341,1298584..1299888)
location: region:1236188-1299888:1
so has part: feature:1236188-1236421:1:exon
so has part: feature:1272071-1272127:1:exon
so has part: feature:1283708-1283818:1:exon
so has part: feature:1284144-1284275:1:exon
so has part: feature:1286914-1287021:1:exon
so has part: feature:1289702-1289862:1:exon
so has part: feature:1292067-1292202:1:exon
so has part: feature:1293898-1293991:1:exon
so has part: feature:1294696-1295184:1:exon
so has part: feature:1298019-1298341:1:exon
so has part: feature:1298584-1299888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1236188-1236421:1:exon

position:1236421:1
position: 1236421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1272071-1272127:1:exon

position:1272071:1
position: 1272071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272127:1
position: 1272127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283708-1283818:1:exon

position:1283708:1
position: 1283708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283818:1
position: 1283818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1284144-1284275:1:exon

position:1284144:1
position: 1284144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284275:1
position: 1284275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1286914-1287021:1:exon

position:1286914:1
position: 1286914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287021:1
position: 1287021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1289702-1289862:1:exon

position:1289702:1
position: 1289702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289862:1
position: 1289862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1292067-1292202:1:exon

position:1292067:1
position: 1292067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292202:1
position: 1292202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1293898-1293991:1:exon

position:1293898:1
position: 1293898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293991:1
position: 1293991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1294696-1295184:1:exon

position:1294696:1
position: 1294696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295184:1
position: 1295184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1298019-1298341:1:exon

position:1298019:1
position: 1298019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298341:1
position: 1298341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1298584-1299888:1:exon

position:1298584:1
position: 1298584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fam189a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: fam189a1
product: family with sequence similarity 189 member A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178428.1
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(1236188..1236421,1272071..1272127,1283708..1283818,1284144..1284275,1286914..1287021,1289702..1289862,1292070..1292202,1293898..1293991,1294696..1295184,1298019..1298341,1298584..1299888)
location: region:1236188-1299888:1
so has part: feature:1236188-1236421:1:exon
so has part: feature:1272071-1272127:1:exon
so has part: feature:1283708-1283818:1:exon
so has part: feature:1284144-1284275:1:exon
so has part: feature:1286914-1287021:1:exon
so has part: feature:1289702-1289862:1:exon
so has part: feature:1292070-1292202:1:exon
so has part: feature:1293898-1293991:1:exon
so has part: feature:1294696-1295184:1:exon
so has part: feature:1298019-1298341:1:exon
so has part: feature:1298584-1299888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1236188-1236421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1272071-1272127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1283708-1283818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284144-1284275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1286914-1287021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289702-1289862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1292070-1292202:1:exon

position:1292070:1
position: 1292070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1293898-1293991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294696-1295184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298019-1298341:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1298584-1299888:1:exon

fam189a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: fam189a1
product: family with sequence similarity 189 member A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178429.1
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(1236188..1236421,1272071..1272127,1284144..1284275,1286914..1287021,1289702..1289862,1292067..1292202,1293898..1293991,1294696..1295184,1298019..1298341,1298584..1299888)
location: region:1236188-1299888:1
so has part: feature:1236188-1236421:1:exon
so has part: feature:1272071-1272127:1:exon
so has part: feature:1284144-1284275:1:exon
so has part: feature:1286914-1287021:1:exon
so has part: feature:1289702-1289862:1:exon
so has part: feature:1292067-1292202:1:exon
so has part: feature:1293898-1293991:1:exon
so has part: feature:1294696-1295184:1:exon
so has part: feature:1298019-1298341:1:exon
so has part: feature:1298584-1299888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1236188-1236421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1272071-1272127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1284144-1284275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1286914-1287021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289702-1289862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1292067-1292202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1293898-1293991:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294696-1295184:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1298019-1298341:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298584-1299888:1:exon

fam189a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: fam189a1
product: family with sequence similarity 189 member A1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178430.1
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(1236188..1236421,1272071..1272127,1286914..1287021,1289702..1289862,1292067..1292202,1293898..1293991,1294696..1295184,1298019..1298341,1298584..1299888)
location: region:1236188-1299888:1
so has part: feature:1236188-1236421:1:exon
so has part: feature:1272071-1272127:1:exon
so has part: feature:1286914-1287021:1:exon
so has part: feature:1289702-1289862:1:exon
so has part: feature:1292067-1292202:1:exon
so has part: feature:1293898-1293991:1:exon
so has part: feature:1294696-1295184:1:exon
so has part: feature:1298019-1298341:1:exon
so has part: feature:1298584-1299888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1236188-1236421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1272071-1272127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286914-1287021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1289702-1289862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292067-1292202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1293898-1293991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294696-1295184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298019-1298341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1298584-1299888:1:exon

fam189a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189A1 isoform X1
translation: MPGGRRRSRSLGPAESRRRDRGRLMLALGAAQMALGCLIVAVSFAALALTSSARVRHSCPFWAGFSVLLSGLIGVVSWKRPISLVITFFMLLSAVCVMLNLAGSILSCQNAQMVTSLQYCQLYKFDGDGVCVCCEIQEEAKGCSTLSETLKLNPVQECSMVRLALKDLLFSICALNVISTIVCALATAMCCMQMVTADIMQMLIPQRLRAANPECESPHGTDLQQPLDFDEFIPPMPPPPYYPPEYTCSPGVETQRSLHLDFPHSPFSTMYSVAINSPSSLYPAELPPPYEAVVGQPPTSQVNMLDHQSSEPSQNSSSSLCDRNISAAFSTQVFVDNASLTLCEPADAPGHNGSSGDCCSLDVQESVHSADSAIPATATDHGCTSLEADVRWRHRTYSENSREEGSRSPALSQGSVEWREHRLSECPVLSASTVRKKPHTPAQANSASLKQIKMCCGVFRQSTMSDGVRLPARRKTGGNRIIRSSSDPATCTSTEAPYLELRSVASSRFAKRFQPIKQQRDIGMVDGHLKQQVPRGISSERPHSLVDLKTYKDTKILVAKFLQHSSCNLAPEVQHVVNNIRSVIKSDERHMEEAIYSASVIDQVMTSSHHPVNMLRMRLQEDLYLQSCGDLSSPSASVRTLRVGYSFECERPHSLIGVCRETVL
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(1236224..1236421,1272071..1272127,1283708..1283818,1284144..1284275,1286914..1287021,1289702..1289862,1292067..1292202,1293898..1293991,1294696..1295184,1298019..1298341,1298584..1298769)
location: region:1236224-1298769:1
so has part: feature:1236224-1236421:1:exon
so has part: feature:1272071-1272127:1:exon
so has part: feature:1283708-1283818:1:exon
so has part: feature:1284144-1284275:1:exon
so has part: feature:1286914-1287021:1:exon
so has part: feature:1289702-1289862:1:exon
so has part: feature:1292067-1292202:1:exon
so has part: feature:1293898-1293991:1:exon
so has part: feature:1294696-1295184:1:exon
so has part: feature:1298019-1298341:1:exon
so has part: feature:1298584-1298769:1:exon

XP_041034361.1
type: Protein
SIO_000068: ncbiprotein

position:1236224:1
position: 1236224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298769:1
position: 1298769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1236224-1236421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1272071-1272127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1283708-1283818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284144-1284275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1286914-1287021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289702-1289862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1292067-1292202:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1293898-1293991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294696-1295184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298019-1298341:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1298584-1298769:1:exon

fam189a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189A1 isoform X2
translation: MPGGRRRSRSLGPAESRRRDRGRLMLALGAAQMALGCLIVAVSFAALALTSSARVRHSCPFWAGFSVLLSGLIGVVSWKRPISLVITFFMLLSAVCVMLNLAGSILSCQNAQMVTSLQYCQLYKFDGDGVCVCCEIQEEAKGCSTLSETLKLNPVQECSMVRLALKDLLFSICALNVISTIVCALATAMCCMQMVTADIMQMLIPQRLRAANPECESPHGTDLQQPLDFDEFIPPMPPPPYYPPEYTCSPGVETQSLHLDFPHSPFSTMYSVAINSPSSLYPAELPPPYEAVVGQPPTSQVNMLDHQSSEPSQNSSSSLCDRNISAAFSTQVFVDNASLTLCEPADAPGHNGSSGDCCSLDVQESVHSADSAIPATATDHGCTSLEADVRWRHRTYSENSREEGSRSPALSQGSVEWREHRLSECPVLSASTVRKKPHTPAQANSASLKQIKMCCGVFRQSTMSDGVRLPARRKTGGNRIIRSSSDPATCTSTEAPYLELRSVASSRFAKRFQPIKQQRDIGMVDGHLKQQVPRGISSERPHSLVDLKTYKDTKILVAKFLQHSSCNLAPEVQHVVNNIRSVIKSDERHMEEAIYSASVIDQVMTSSHHPVNMLRMRLQEDLYLQSCGDLSSPSASVRTLRVGYSFECERPHSLIGVCRETVL
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(1236224..1236421,1272071..1272127,1283708..1283818,1284144..1284275,1286914..1287021,1289702..1289862,1292070..1292202,1293898..1293991,1294696..1295184,1298019..1298341,1298584..1298769)
location: region:1236224-1298769:1
so has part: feature:1236224-1236421:1:exon
so has part: feature:1272071-1272127:1:exon
so has part: feature:1283708-1283818:1:exon
so has part: feature:1284144-1284275:1:exon
so has part: feature:1286914-1287021:1:exon
so has part: feature:1289702-1289862:1:exon
so has part: feature:1292070-1292202:1:exon
so has part: feature:1293898-1293991:1:exon
so has part: feature:1294696-1295184:1:exon
so has part: feature:1298019-1298341:1:exon
so has part: feature:1298584-1298769:1:exon

XP_041034362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1236224-1236421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1272071-1272127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1283708-1283818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1284144-1284275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1286914-1287021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289702-1289862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1292070-1292202:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1293898-1293991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294696-1295184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298019-1298341:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1298584-1298769:1:exon

fam189a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189A1 isoform X3
translation: MPGGRRRSRSLGPAESRRRDRGRLMLALGAAQMALGCLIVAVSFAALALTSSARVRHSCPFWAGFSVLLSGLIGVVSWKRPISLVYKFDGDGVCVCCEIQEEAKGCSTLSETLKLNPVQECSMVRLALKDLLFSICALNVISTIVCALATAMCCMQMVTADIMQMLIPQRLRAANPECESPHGTDLQQPLDFDEFIPPMPPPPYYPPEYTCSPGVETQRSLHLDFPHSPFSTMYSVAINSPSSLYPAELPPPYEAVVGQPPTSQVNMLDHQSSEPSQNSSSSLCDRNISAAFSTQVFVDNASLTLCEPADAPGHNGSSGDCCSLDVQESVHSADSAIPATATDHGCTSLEADVRWRHRTYSENSREEGSRSPALSQGSVEWREHRLSECPVLSASTVRKKPHTPAQANSASLKQIKMCCGVFRQSTMSDGVRLPARRKTGGNRIIRSSSDPATCTSTEAPYLELRSVASSRFAKRFQPIKQQRDIGMVDGHLKQQVPRGISSERPHSLVDLKTYKDTKILVAKFLQHSSCNLAPEVQHVVNNIRSVIKSDERHMEEAIYSASVIDQVMTSSHHPVNMLRMRLQEDLYLQSCGDLSSPSASVRTLRVGYSFECERPHSLIGVCRETVL
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(1236224..1236421,1272071..1272127,1284144..1284275,1286914..1287021,1289702..1289862,1292067..1292202,1293898..1293991,1294696..1295184,1298019..1298341,1298584..1298769)
location: region:1236224-1298769:1
so has part: feature:1236224-1236421:1:exon
so has part: feature:1272071-1272127:1:exon
so has part: feature:1284144-1284275:1:exon
so has part: feature:1286914-1287021:1:exon
so has part: feature:1289702-1289862:1:exon
so has part: feature:1292067-1292202:1:exon
so has part: feature:1293898-1293991:1:exon
so has part: feature:1294696-1295184:1:exon
so has part: feature:1298019-1298341:1:exon
so has part: feature:1298584-1298769:1:exon

XP_041034363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1236224-1236421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1272071-1272127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1284144-1284275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1286914-1287021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289702-1289862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1292067-1292202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1293898-1293991:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294696-1295184:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1298019-1298341:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1298584-1298769:1:exon

fam189a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189A1 isoform X4
translation: MPGGRRRSRSLGPAESRRRDRGRLMLALGAAQMALGCLIVAVSFAALALTSSARVRHSCPFWAGFSVLLSGLIGVVSWKRPISLVDLLFSICALNVISTIVCALATAMCCMQMVTADIMQMLIPQRLRAANPECESPHGTDLQQPLDFDEFIPPMPPPPYYPPEYTCSPGVETQRSLHLDFPHSPFSTMYSVAINSPSSLYPAELPPPYEAVVGQPPTSQVNMLDHQSSEPSQNSSSSLCDRNISAAFSTQVFVDNASLTLCEPADAPGHNGSSGDCCSLDVQESVHSADSAIPATATDHGCTSLEADVRWRHRTYSENSREEGSRSPALSQGSVEWREHRLSECPVLSASTVRKKPHTPAQANSASLKQIKMCCGVFRQSTMSDGVRLPARRKTGGNRIIRSSSDPATCTSTEAPYLELRSVASSRFAKRFQPIKQQRDIGMVDGHLKQQVPRGISSERPHSLVDLKTYKDTKILVAKFLQHSSCNLAPEVQHVVNNIRSVIKSDERHMEEAIYSASVIDQVMTSSHHPVNMLRMRLQEDLYLQSCGDLSSPSASVRTLRVGYSFECERPHSLIGVCRETVL
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(1236224..1236421,1272071..1272127,1286914..1287021,1289702..1289862,1292067..1292202,1293898..1293991,1294696..1295184,1298019..1298341,1298584..1298769)
location: region:1236224-1298769:1
so has part: feature:1236224-1236421:1:exon
so has part: feature:1272071-1272127:1:exon
so has part: feature:1286914-1287021:1:exon
so has part: feature:1289702-1289862:1:exon
so has part: feature:1292067-1292202:1:exon
so has part: feature:1293898-1293991:1:exon
so has part: feature:1294696-1295184:1:exon
so has part: feature:1298019-1298341:1:exon
so has part: feature:1298584-1298769:1:exon

XP_041034364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1236224-1236421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1272071-1272127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286914-1287021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1289702-1289862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292067-1292202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1293898-1293991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294696-1295184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298019-1298341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1298584-1298769:1:exon

fam189a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: fam189a1
product: family with sequence similarity 189 member A1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178431.1
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(1236337..1236421,1263624..1263672,1272071..1272127,1283708..1283818,1284144..1284275,1286914..1287021,1289702..1289862,1292067..1292202,1293898..1293991,1294696..1295184,1298019..1298341,1298584..1299888)
location: region:1236337-1299888:1
so has part: feature:1236337-1236421:1:exon
so has part: feature:1263624-1263672:1:exon
so has part: feature:1272071-1272127:1:exon
so has part: feature:1283708-1283818:1:exon
so has part: feature:1284144-1284275:1:exon
so has part: feature:1286914-1287021:1:exon
so has part: feature:1289702-1289862:1:exon
so has part: feature:1292067-1292202:1:exon
so has part: feature:1293898-1293991:1:exon
so has part: feature:1294696-1295184:1:exon
so has part: feature:1298019-1298341:1:exon
so has part: feature:1298584-1299888:1:exon

position:1236337:1
position: 1236337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1236337-1236421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1263624-1263672:1:exon

position:1263624:1
position: 1263624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263672:1
position: 1263672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1272071-1272127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283708-1283818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284144-1284275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1286914-1287021:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1289702-1289862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1292067-1292202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1293898-1293991:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1294696-1295184:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1298019-1298341:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1298584-1299888:1:exon

fam189a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: fam189a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189A1 isoform X5
translation: MLLSAVCVMLNLAGSILSCQNAQMVTSLQYCQLYKFDGDGVCVCCEIQEEAKGCSTLSETLKLNPVQECSMVRLALKDLLFSICALNVISTIVCALATAMCCMQMVTADIMQMLIPQRLRAANPECESPHGTDLQQPLDFDEFIPPMPPPPYYPPEYTCSPGVETQRSLHLDFPHSPFSTMYSVAINSPSSLYPAELPPPYEAVVGQPPTSQVNMLDHQSSEPSQNSSSSLCDRNISAAFSTQVFVDNASLTLCEPADAPGHNGSSGDCCSLDVQESVHSADSAIPATATDHGCTSLEADVRWRHRTYSENSREEGSRSPALSQGSVEWREHRLSECPVLSASTVRKKPHTPAQANSASLKQIKMCCGVFRQSTMSDGVRLPARRKTGGNRIIRSSSDPATCTSTEAPYLELRSVASSRFAKRFQPIKQQRDIGMVDGHLKQQVPRGISSERPHSLVDLKTYKDTKILVAKFLQHSSCNLAPEVQHVVNNIRSVIKSDERHMEEAIYSASVIDQVMTSSHHPVNMLRMRLQEDLYLQSCGDLSSPSASVRTLRVGYSFECERPHSLIGVCRETVL
SIO_010081: fam189a1
subclass of: SO_0000673
so part of: fam189a1
location: join(1283720..1283818,1284144..1284275,1286914..1287021,1289702..1289862,1292067..1292202,1293898..1293991,1294696..1295184,1298019..1298341,1298584..1298769)
location: region:1283720-1298769:1
so has part: feature:1283720-1283818:1:exon
so has part: feature:1284144-1284275:1:exon
so has part: feature:1286914-1287021:1:exon
so has part: feature:1289702-1289862:1:exon
so has part: feature:1292067-1292202:1:exon
so has part: feature:1293898-1293991:1:exon
so has part: feature:1294696-1295184:1:exon
so has part: feature:1298019-1298341:1:exon
so has part: feature:1298584-1298769:1:exon

XP_041034365.1
type: Protein
SIO_000068: ncbiprotein

position:1283720:1
position: 1283720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283720-1283818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1284144-1284275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1286914-1287021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1289702-1289862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292067-1292202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1293898-1293991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294696-1295184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298019-1298341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1298584-1298769:1:exon

apba2b
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: apba2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1300018..1602088)
location: region:1300018-1602088:-1
so has part: feature:1300018-1602088:-1:exon
subclass of: SO_0000010

121272041
type: Gene
SIO_000068: ncbigene

position:1300018:-1
position: 1300018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1602088:-1
position: 1602088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300018-1602088:-1:exon

apba2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: apba2b
product: amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178422.1
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(1300018..1301041,1302149..1302289,1322647..1322766,1329775..1329987,1340911..1341090,1343540..1343725,1345274..1345360,1345609..1345644,1347845..1347990,1350401..1350440,1351037..1351117,1355592..1356537,1601645..1602088))
location: region:1300018-1602088:-1
so has part: feature:1601645-1602088:-1:exon
so has part: feature:1355592-1356537:-1:exon
so has part: feature:1351037-1351117:-1:exon
so has part: feature:1350401-1350440:-1:exon
so has part: feature:1347845-1347990:-1:exon
so has part: feature:1345609-1345644:-1:exon
so has part: feature:1345274-1345360:-1:exon
so has part: feature:1343540-1343725:-1:exon
so has part: feature:1340911-1341090:-1:exon
so has part: feature:1329775-1329987:-1:exon
so has part: feature:1322647-1322766:-1:exon
so has part: feature:1302149-1302289:-1:exon
so has part: feature:1300018-1301041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1601645-1602088:-1:exon

position:1601645:-1
position: 1601645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355592-1356537:-1:exon

position:1355592:-1
position: 1355592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356537:-1
position: 1356537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1351037-1351117:-1:exon

position:1351037:-1
position: 1351037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351117:-1
position: 1351117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1350401-1350440:-1:exon

position:1350401:-1
position: 1350401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350440:-1
position: 1350440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1347845-1347990:-1:exon

position:1347845:-1
position: 1347845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347990:-1
position: 1347990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1345609-1345644:-1:exon

position:1345609:-1
position: 1345609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345644:-1
position: 1345644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1345274-1345360:-1:exon

position:1345274:-1
position: 1345274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345360:-1
position: 1345360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1343540-1343725:-1:exon

position:1343540:-1
position: 1343540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343725:-1
position: 1343725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1340911-1341090:-1:exon

position:1340911:-1
position: 1340911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341090:-1
position: 1341090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1329775-1329987:-1:exon

position:1329775:-1
position: 1329775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329987:-1
position: 1329987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1322647-1322766:-1:exon

position:1322647:-1
position: 1322647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322766:-1
position: 1322766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1302149-1302289:-1:exon

position:1302149:-1
position: 1302149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302289:-1
position: 1302289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1300018-1301041:-1:exon

position:1301041:-1
position: 1301041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

apba2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: apba2b
product: amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178426.1
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(1300018..1301041,1302149..1302289,1322647..1322766,1329775..1329987,1340911..1341090,1343540..1343725,1345274..1345360,1345609..1345644,1347845..1347990,1350401..1350440,1355592..1356537,1501514..1501629,1601645..1602088))
location: region:1300018-1602088:-1
so has part: feature:1601645-1602088:-1:exon
so has part: feature:1501514-1501629:-1:exon
so has part: feature:1355592-1356537:-1:exon
so has part: feature:1350401-1350440:-1:exon
so has part: feature:1347845-1347990:-1:exon
so has part: feature:1345609-1345644:-1:exon
so has part: feature:1345274-1345360:-1:exon
so has part: feature:1343540-1343725:-1:exon
so has part: feature:1340911-1341090:-1:exon
so has part: feature:1329775-1329987:-1:exon
so has part: feature:1322647-1322766:-1:exon
so has part: feature:1302149-1302289:-1:exon
so has part: feature:1300018-1301041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1601645-1602088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501514-1501629:-1:exon

position:1501514:-1
position: 1501514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501629:-1
position: 1501629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1355592-1356537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1350401-1350440:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1347845-1347990:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345609-1345644:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1345274-1345360:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1343540-1343725:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1340911-1341090:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1329775-1329987:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322647-1322766:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1302149-1302289:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1300018-1301041:-1:exon

apba2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: apba2b
product: amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178425.1
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(1300018..1301041,1302149..1302289,1322647..1322766,1329775..1329987,1340911..1341090,1343540..1343725,1345274..1345360,1345609..1345644,1347845..1347984,1350401..1350440,1351037..1351117,1355592..1356537,1501514..1501629,1601645..1602088))
location: region:1300018-1602088:-1
so has part: feature:1601645-1602088:-1:exon
so has part: feature:1501514-1501629:-1:exon
so has part: feature:1355592-1356537:-1:exon
so has part: feature:1351037-1351117:-1:exon
so has part: feature:1350401-1350440:-1:exon
so has part: feature:1347845-1347984:-1:exon
so has part: feature:1345609-1345644:-1:exon
so has part: feature:1345274-1345360:-1:exon
so has part: feature:1343540-1343725:-1:exon
so has part: feature:1340911-1341090:-1:exon
so has part: feature:1329775-1329987:-1:exon
so has part: feature:1322647-1322766:-1:exon
so has part: feature:1302149-1302289:-1:exon
so has part: feature:1300018-1301041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1601645-1602088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501514-1501629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1355592-1356537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1351037-1351117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1350401-1350440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1347845-1347984:-1:exon

position:1347984:-1
position: 1347984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1345609-1345644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1345274-1345360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1343540-1343725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1340911-1341090:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1329775-1329987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322647-1322766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1302149-1302289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1300018-1301041:-1:exon

apba2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: apba2b
product: amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178421.1
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(1300018..1301041,1302149..1302289,1322647..1322766,1329775..1329987,1340911..1341090,1343540..1343725,1345274..1345360,1345609..1345644,1347845..1347990,1350401..1350440,1351037..1351117,1355592..1356537,1501514..1501629,1601645..1602088))
location: region:1300018-1602088:-1
so has part: feature:1601645-1602088:-1:exon
so has part: feature:1501514-1501629:-1:exon
so has part: feature:1355592-1356537:-1:exon
so has part: feature:1351037-1351117:-1:exon
so has part: feature:1350401-1350440:-1:exon
so has part: feature:1347845-1347990:-1:exon
so has part: feature:1345609-1345644:-1:exon
so has part: feature:1345274-1345360:-1:exon
so has part: feature:1343540-1343725:-1:exon
so has part: feature:1340911-1341090:-1:exon
so has part: feature:1329775-1329987:-1:exon
so has part: feature:1322647-1322766:-1:exon
so has part: feature:1302149-1302289:-1:exon
so has part: feature:1300018-1301041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1601645-1602088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1501514-1501629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1355592-1356537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1351037-1351117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1350401-1350440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1347845-1347990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1345609-1345644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1345274-1345360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1343540-1343725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1340911-1341090:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1329775-1329987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322647-1322766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1302149-1302289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1300018-1301041:-1:exon

apba2b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: apba2b
product: amyloid beta (A4) precursor protein-binding, family A, member 2b, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178423.1
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(1300018..1301041,1302149..1302289,1322647..1322766,1329775..1329987,1340911..1341090,1343540..1343725,1345274..1345360,1345609..1345644,1347845..1347990,1350401..1350440,1351037..1351117,1355592..1356537,1501514..1501629,1584760..1584842))
location: region:1300018-1584842:-1
so has part: feature:1584760-1584842:-1:exon
so has part: feature:1501514-1501629:-1:exon
so has part: feature:1355592-1356537:-1:exon
so has part: feature:1351037-1351117:-1:exon
so has part: feature:1350401-1350440:-1:exon
so has part: feature:1347845-1347990:-1:exon
so has part: feature:1345609-1345644:-1:exon
so has part: feature:1345274-1345360:-1:exon
so has part: feature:1343540-1343725:-1:exon
so has part: feature:1340911-1341090:-1:exon
so has part: feature:1329775-1329987:-1:exon
so has part: feature:1322647-1322766:-1:exon
so has part: feature:1302149-1302289:-1:exon
so has part: feature:1300018-1301041:-1:exon

position:1584842:-1
position: 1584842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1584760-1584842:-1:exon

position:1584760:-1
position: 1584760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1501514-1501629:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1355592-1356537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1351037-1351117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1350401-1350440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1347845-1347990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1345609-1345644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1345274-1345360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1343540-1343725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1340911-1341090:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1329775-1329987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322647-1322766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1302149-1302289:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1300018-1301041:-1:exon

apba2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: apba2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta A4 precursor protein-binding family A member 2 isoform X3
translation: MASSSVELGVGPCATPPHCQEEPKHLPSEDWQEDGKESCPIAVDTDLRDNPGDGDSSSDYVNNTSEEEEDYDEGLPEEEEGVTYYIRYCPEEDSYLEDIGCIGGGYRTQAISTAAADDCQEAVEEAWTESNGLSQAMTEESEDHGCDRDGQPEESDCTVAQAEMSSEGIGSSEGTPGEYSPSEHVAQAPPTFRHHCSKSEVDAEDAEEDIDQIVAEIKMSMSMSSLNSVGEQSLEEAVKGKLDRSLASCQGRGEGRPRLCQASPGDGKSDEAPFSEKPGLRAPEEHKQWNSEQQTKKPSAFPNFVDVPGPCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVGRIKRVQKTSKTKKKGGSDGDSQPMTEVDLFISTQRIKVLNADSQEPMMDHALRTISYIADIGNIVVLMARRRVPRAASQDCIESTPGSLEGKKQYKMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDIINTQEMYNDDLVHFSNSANCKELHVEKLKGEIFGVVIVESGWGSILPTVILANMMNAGPAARSGKLSIGDQIMSINGTSLVGLPLTTCQGIIKGLKNQVQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLYI
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(1300970..1301041,1302149..1302289,1322647..1322766,1329775..1329987,1340911..1341090,1343540..1343725,1345274..1345360,1345609..1345644,1347845..1347990,1350401..1350440,1355592..1356470))
location: region:1300970-1356470:-1
so has part: feature:1355592-1356470:-1:exon
so has part: feature:1350401-1350440:-1:exon
so has part: feature:1347845-1347990:-1:exon
so has part: feature:1345609-1345644:-1:exon
so has part: feature:1345274-1345360:-1:exon
so has part: feature:1343540-1343725:-1:exon
so has part: feature:1340911-1341090:-1:exon
so has part: feature:1329775-1329987:-1:exon
so has part: feature:1322647-1322766:-1:exon
so has part: feature:1302149-1302289:-1:exon
so has part: feature:1300970-1301041:-1:exon

XP_041034360.1
type: Protein
SIO_000068: ncbiprotein

position:1300970:-1
position: 1300970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356470:-1
position: 1356470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1355592-1356470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1350401-1350440:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1347845-1347990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1345609-1345644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345274-1345360:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1343540-1343725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1340911-1341090:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1329775-1329987:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1322647-1322766:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1302149-1302289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300970-1301041:-1:exon

apba2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: apba2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta A4 precursor protein-binding family A member 2 isoform X2
translation: MASSSVELGVGPCATPPHCQEEPKHLPSEDWQEDGKESCPIAVDTDLRDNPGDGDSSSDYVNNTSEEEEDYDEGLPEEEEGVTYYIRYCPEEDSYLEDIGCIGGGYRTQAISTAAADDCQEAVEEAWTESNGLSQAMTEESEDHGCDRDGQPEESDCTVAQAEMSSEGIGSSEGTPGEYSPSEHVAQAPPTFRHHCSKSEVDAEDAEEDIDQIVAEIKMSMSMSSLNSVGEQSLEEAVKGKLDRSLASCQGRGEGRPRLCQASPGDGKSDEAPFSEKPGLRAPEEHKQWNSEQVTPDIEQPRKQQRSDLNGPVNNNYLSEQTKKPSAFPNFVDGPCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVGRIKRVQKTSKTKKKGGSDGDSQPMTEVDLFISTQRIKVLNADSQEPMMDHALRTISYIADIGNIVVLMARRRVPRAASQDCIESTPGSLEGKKQYKMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDIINTQEMYNDDLVHFSNSANCKELHVEKLKGEIFGVVIVESGWGSILPTVILANMMNAGPAARSGKLSIGDQIMSINGTSLVGLPLTTCQGIIKGLKNQVQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLYI
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(1300970..1301041,1302149..1302289,1322647..1322766,1329775..1329987,1340911..1341090,1343540..1343725,1345274..1345360,1345609..1345644,1347845..1347984,1350401..1350440,1351037..1351117,1355592..1356470))
location: region:1300970-1356470:-1
so has part: feature:1355592-1356470:-1:exon
so has part: feature:1351037-1351117:-1:exon
so has part: feature:1350401-1350440:-1:exon
so has part: feature:1347845-1347984:-1:exon
so has part: feature:1345609-1345644:-1:exon
so has part: feature:1345274-1345360:-1:exon
so has part: feature:1343540-1343725:-1:exon
so has part: feature:1340911-1341090:-1:exon
so has part: feature:1329775-1329987:-1:exon
so has part: feature:1322647-1322766:-1:exon
so has part: feature:1302149-1302289:-1:exon
so has part: feature:1300970-1301041:-1:exon

XP_041034359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1355592-1356470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1351037-1351117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350401-1350440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1347845-1347984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345609-1345644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345274-1345360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1343540-1343725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340911-1341090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1329775-1329987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1322647-1322766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1302149-1302289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300970-1301041:-1:exon

apba2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: apba2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta A4 precursor protein-binding family A member 2 isoform X1
translation: MASSSVELGVGPCATPPHCQEEPKHLPSEDWQEDGKESCPIAVDTDLRDNPGDGDSSSDYVNNTSEEEEDYDEGLPEEEEGVTYYIRYCPEEDSYLEDIGCIGGGYRTQAISTAAADDCQEAVEEAWTESNGLSQAMTEESEDHGCDRDGQPEESDCTVAQAEMSSEGIGSSEGTPGEYSPSEHVAQAPPTFRHHCSKSEVDAEDAEEDIDQIVAEIKMSMSMSSLNSVGEQSLEEAVKGKLDRSLASCQGRGEGRPRLCQASPGDGKSDEAPFSEKPGLRAPEEHKQWNSEQVTPDIEQPRKQQRSDLNGPVNNNYLSEQTKKPSAFPNFVDVPGPCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVGRIKRVQKTSKTKKKGGSDGDSQPMTEVDLFISTQRIKVLNADSQEPMMDHALRTISYIADIGNIVVLMARRRVPRAASQDCIESTPGSLEGKKQYKMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDIINTQEMYNDDLVHFSNSANCKELHVEKLKGEIFGVVIVESGWGSILPTVILANMMNAGPAARSGKLSIGDQIMSINGTSLVGLPLTTCQGIIKGLKNQVQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLYI
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(1300970..1301041,1302149..1302289,1322647..1322766,1329775..1329987,1340911..1341090,1343540..1343725,1345274..1345360,1345609..1345644,1347845..1347990,1350401..1350440,1351037..1351117,1355592..1356470))
location: region:1300970-1356470:-1
so has part: feature:1355592-1356470:-1:exon
so has part: feature:1351037-1351117:-1:exon
so has part: feature:1350401-1350440:-1:exon
so has part: feature:1347845-1347990:-1:exon
so has part: feature:1345609-1345644:-1:exon
so has part: feature:1345274-1345360:-1:exon
so has part: feature:1343540-1343725:-1:exon
so has part: feature:1340911-1341090:-1:exon
so has part: feature:1329775-1329987:-1:exon
so has part: feature:1322647-1322766:-1:exon
so has part: feature:1302149-1302289:-1:exon
so has part: feature:1300970-1301041:-1:exon

XP_041034355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1355592-1356470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1351037-1351117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350401-1350440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1347845-1347990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345609-1345644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345274-1345360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1343540-1343725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340911-1341090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1329775-1329987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1322647-1322766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1302149-1302289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300970-1301041:-1:exon

apba2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: apba2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta A4 precursor protein-binding family A member 2 isoform X1
translation: MASSSVELGVGPCATPPHCQEEPKHLPSEDWQEDGKESCPIAVDTDLRDNPGDGDSSSDYVNNTSEEEEDYDEGLPEEEEGVTYYIRYCPEEDSYLEDIGCIGGGYRTQAISTAAADDCQEAVEEAWTESNGLSQAMTEESEDHGCDRDGQPEESDCTVAQAEMSSEGIGSSEGTPGEYSPSEHVAQAPPTFRHHCSKSEVDAEDAEEDIDQIVAEIKMSMSMSSLNSVGEQSLEEAVKGKLDRSLASCQGRGEGRPRLCQASPGDGKSDEAPFSEKPGLRAPEEHKQWNSEQVTPDIEQPRKQQRSDLNGPVNNNYLSEQTKKPSAFPNFVDVPGPCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVGRIKRVQKTSKTKKKGGSDGDSQPMTEVDLFISTQRIKVLNADSQEPMMDHALRTISYIADIGNIVVLMARRRVPRAASQDCIESTPGSLEGKKQYKMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDIINTQEMYNDDLVHFSNSANCKELHVEKLKGEIFGVVIVESGWGSILPTVILANMMNAGPAARSGKLSIGDQIMSINGTSLVGLPLTTCQGIIKGLKNQVQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLYI
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(1300970..1301041,1302149..1302289,1322647..1322766,1329775..1329987,1340911..1341090,1343540..1343725,1345274..1345360,1345609..1345644,1347845..1347990,1350401..1350440,1351037..1351117,1355592..1356470))
location: region:1300970-1356470:-1
so has part: feature:1355592-1356470:-1:exon
so has part: feature:1351037-1351117:-1:exon
so has part: feature:1350401-1350440:-1:exon
so has part: feature:1347845-1347990:-1:exon
so has part: feature:1345609-1345644:-1:exon
so has part: feature:1345274-1345360:-1:exon
so has part: feature:1343540-1343725:-1:exon
so has part: feature:1340911-1341090:-1:exon
so has part: feature:1329775-1329987:-1:exon
so has part: feature:1322647-1322766:-1:exon
so has part: feature:1302149-1302289:-1:exon
so has part: feature:1300970-1301041:-1:exon

XP_041034356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1355592-1356470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1351037-1351117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350401-1350440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1347845-1347990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345609-1345644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345274-1345360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1343540-1343725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340911-1341090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1329775-1329987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1322647-1322766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1302149-1302289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300970-1301041:-1:exon

apba2b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: apba2b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-beta A4 precursor protein-binding family A member 2 isoform X1
translation: MASSSVELGVGPCATPPHCQEEPKHLPSEDWQEDGKESCPIAVDTDLRDNPGDGDSSSDYVNNTSEEEEDYDEGLPEEEEGVTYYIRYCPEEDSYLEDIGCIGGGYRTQAISTAAADDCQEAVEEAWTESNGLSQAMTEESEDHGCDRDGQPEESDCTVAQAEMSSEGIGSSEGTPGEYSPSEHVAQAPPTFRHHCSKSEVDAEDAEEDIDQIVAEIKMSMSMSSLNSVGEQSLEEAVKGKLDRSLASCQGRGEGRPRLCQASPGDGKSDEAPFSEKPGLRAPEEHKQWNSEQVTPDIEQPRKQQRSDLNGPVNNNYLSEQTKKPSAFPNFVDVPGPCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVGRIKRVQKTSKTKKKGGSDGDSQPMTEVDLFISTQRIKVLNADSQEPMMDHALRTISYIADIGNIVVLMARRRVPRAASQDCIESTPGSLEGKKQYKMVCHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDIINTQEMYNDDLVHFSNSANCKELHVEKLKGEIFGVVIVESGWGSILPTVILANMMNAGPAARSGKLSIGDQIMSINGTSLVGLPLTTCQGIIKGLKNQVQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLYI
SIO_010081: apba2b
subclass of: SO_0000673
so part of: apba2b
location: complement(join(1300970..1301041,1302149..1302289,1322647..1322766,1329775..1329987,1340911..1341090,1343540..1343725,1345274..1345360,1345609..1345644,1347845..1347990,1350401..1350440,1351037..1351117,1355592..1356470))
location: region:1300970-1356470:-1
so has part: feature:1355592-1356470:-1:exon
so has part: feature:1351037-1351117:-1:exon
so has part: feature:1350401-1350440:-1:exon
so has part: feature:1347845-1347990:-1:exon
so has part: feature:1345609-1345644:-1:exon
so has part: feature:1345274-1345360:-1:exon
so has part: feature:1343540-1343725:-1:exon
so has part: feature:1340911-1341090:-1:exon
so has part: feature:1329775-1329987:-1:exon
so has part: feature:1322647-1322766:-1:exon
so has part: feature:1302149-1302289:-1:exon
so has part: feature:1300970-1301041:-1:exon

XP_041034357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1355592-1356470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1351037-1351117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350401-1350440:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1347845-1347990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1345609-1345644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1345274-1345360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1343540-1343725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340911-1341090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1329775-1329987:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1322647-1322766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1302149-1302289:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300970-1301041:-1:exon

LOC121271947
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121271947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1588137..1588547
location: region:1588137-1588547:1
so has part: feature:1588137-1588547:1:exon
subclass of: SO_0000010

121271947
type: Gene
SIO_000068: ncbigene

position:1588137:1
position: 1588137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588547:1
position: 1588547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1588137-1588547:1:exon

LOC121271947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121271947
product: histone H2B type 1-L-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins
transcript id: XM_041178204.1
SIO_010081: LOC121271947
subclass of: SO_0000673
so part of: LOC121271947
location: join(1588137..1588298,1588383..1588547)
location: region:1588137-1588547:1
so has part: feature:1588137-1588298:1:exon
so has part: feature:1588383-1588547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1588137-1588298:1:exon

position:1588298:1
position: 1588298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1588383-1588547:1:exon

position:1588383:1
position: 1588383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121271947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121271947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2B type 1-L-like
translation: MSCSKSSGIPEVVAAAKGGASHKASKQSLTKVTRKLPKQQRKSRKQSYSTYVYRHISSEASHLIHYNKCHTIPAREIQSVICLMLPGELAKHANFKGTKAVTKYTNSI
SIO_010081: LOC121271947
subclass of: SO_0000673
so part of: LOC121271947
location: join(1588137..1588298,1588383..1588547)
location: region:1588137-1588547:1
so has part: feature:1588137-1588298:1:exon
so has part: feature:1588383-1588547:1:exon

XP_041034138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1588137-1588298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1588383-1588547:1:exon

mphosph10
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: mphosph10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1602131..1615459
location: region:1602131-1615459:1
so has part: feature:1602131-1615459:1:exon
subclass of: SO_0000010

121272071
type: Gene
SIO_000068: ncbigene

position:1602131:1
position: 1602131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1615459:1
position: 1615459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1602131-1615459:1:exon

mphosph10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: mphosph10
product: M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178501.1
SIO_010081: mphosph10
subclass of: SO_0000673
so part of: mphosph10
location: join(1602131..1602244,1603471..1604119,1605591..1605745,1607500..1607671,1608559..1608700,1609017..1609084,1610385..1610522,1612585..1612695,1613608..1613715,1614194..1614424,1615215..1615459)
location: region:1602131-1615459:1
so has part: feature:1602131-1602244:1:exon
so has part: feature:1603471-1604119:1:exon
so has part: feature:1605591-1605745:1:exon
so has part: feature:1607500-1607671:1:exon
so has part: feature:1608559-1608700:1:exon
so has part: feature:1609017-1609084:1:exon
so has part: feature:1610385-1610522:1:exon
so has part: feature:1612585-1612695:1:exon
so has part: feature:1613608-1613715:1:exon
so has part: feature:1614194-1614424:1:exon
so has part: feature:1615215-1615459:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1602131-1602244:1:exon

position:1602244:1
position: 1602244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1603471-1604119:1:exon

position:1603471:1
position: 1603471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1604119:1
position: 1604119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1605591-1605745:1:exon

position:1605591:1
position: 1605591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605745:1
position: 1605745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1607500-1607671:1:exon

position:1607500:1
position: 1607500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607671:1
position: 1607671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1608559-1608700:1:exon

position:1608559:1
position: 1608559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608700:1
position: 1608700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1609017-1609084:1:exon

position:1609017:1
position: 1609017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1609084:1
position: 1609084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1610385-1610522:1:exon

position:1610385:1
position: 1610385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1610522:1
position: 1610522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1612585-1612695:1:exon

position:1612585:1
position: 1612585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1612695:1
position: 1612695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1613608-1613715:1:exon

position:1613608:1
position: 1613608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1613715:1
position: 1613715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1614194-1614424:1:exon

position:1614194:1
position: 1614194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614424:1
position: 1614424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1615215-1615459:1:exon

position:1615215:1
position: 1615215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

mphosph10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: mphosph10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar ribonucleoprotein protein MPP10
translation: MAALGECARRLERAVERPELLLSVQDGLASDFTVLTKELYDFQKAQEPESTAGSPLKELVVEQFDEEQIWQEIELQNNSVLNCFKDTVAFLLQDTLIRLIDTGDVEIEAPEEEFQNNESAEADGEIGEGSDGEEEESKKQTVERERVQTENPSDEDSDLNFDIDEVEKRTKLQRKSPRFASSSELDDKFFRLSEMEDFLKKVEKQEEKQKDDDDEEIDYFEDIPSEDEELVLKTKTKIKTKSSRNLQYKDFFNPDMDEEPIEEDGDEEKESIEAEGEPEPEKFEEGEEIDEDQEEEMAESESSLEAKRAHKKVSFNLSDDSDVEELANEIGGKKPEEAKSVFEKRQEKLNTQIQQLEKSALEQKPWQLLGEVSAQKRPENSLLEEDLLFDNAVRKAPVITEETTLQLEDVIMQRIKDQAWDDVVRKEKPKDEIFEYKKRLTLDHEKSKLSLAEVYEQEYLKQTQQKSEAEENLQHAEIQKSMDSLFLKLDALSNFQFTPKPPVPEVKVVSNLPSISMEEVAPVNVSDATLLAPEEVKEKGRAGDLQGDTEKTATDKKRERRKKKKLKRLRLREKEARQKVLEKLNVKLSNKQVKEKNAEKVRKLTQEGKAMLLKDEGKDKTLRSSKAFFSQLQDQVKAELKGAKIGAKKQNKHRELSASKLKL
SIO_010081: mphosph10
subclass of: SO_0000673
so part of: mphosph10
location: join(1602177..1602244,1603471..1604119,1605591..1605745,1607500..1607671,1608559..1608700,1609017..1609084,1610385..1610522,1612585..1612695,1613608..1613715,1614194..1614424,1615215..1615364)
location: region:1602177-1615364:1
so has part: feature:1602177-1602244:1:exon
so has part: feature:1603471-1604119:1:exon
so has part: feature:1605591-1605745:1:exon
so has part: feature:1607500-1607671:1:exon
so has part: feature:1608559-1608700:1:exon
so has part: feature:1609017-1609084:1:exon
so has part: feature:1610385-1610522:1:exon
so has part: feature:1612585-1612695:1:exon
so has part: feature:1613608-1613715:1:exon
so has part: feature:1614194-1614424:1:exon
so has part: feature:1615215-1615364:1:exon

XP_041034435.1
type: Protein
SIO_000068: ncbiprotein

position:1602177:1
position: 1602177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1615364:1
position: 1615364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1602177-1602244:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1603471-1604119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1605591-1605745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1607500-1607671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1608559-1608700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1609017-1609084:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1610385-1610522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1612585-1612695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1613608-1613715:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1614194-1614424:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1615215-1615364:1:exon

fan1
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: fan1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1617137..1628719
location: region:1617137-1628719:1
so has part: feature:1617137-1628719:1:exon
subclass of: SO_0000010

121272070
type: Gene
SIO_000068: ncbigene

position:1617137:1
position: 1617137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628719:1
position: 1628719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617137-1628719:1:exon

fan1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: fan1
product: FANCD2 and FANCI associated nuclease 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178498.1
SIO_010081: fan1
subclass of: SO_0000673
so part of: fan1
location: join(1617137..1617787,1619774..1619914,1620785..1620983,1621529..1621762,1622005..1622136,1623834..1623942,1624416..1624535,1624852..1625016,1625625..1625790,1625873..1625976,1626748..1626942,1627286..1627414,1628076..1628719)
location: region:1617137-1628719:1
so has part: feature:1617137-1617787:1:exon
so has part: feature:1619774-1619914:1:exon
so has part: feature:1620785-1620983:1:exon
so has part: feature:1621529-1621762:1:exon
so has part: feature:1622005-1622136:1:exon
so has part: feature:1623834-1623942:1:exon
so has part: feature:1624416-1624535:1:exon
so has part: feature:1624852-1625016:1:exon
so has part: feature:1625625-1625790:1:exon
so has part: feature:1625873-1625976:1:exon
so has part: feature:1626748-1626942:1:exon
so has part: feature:1627286-1627414:1:exon
so has part: feature:1628076-1628719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1617137-1617787:1:exon

position:1617787:1
position: 1617787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1619774-1619914:1:exon

position:1619774:1
position: 1619774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1619914:1
position: 1619914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1620785-1620983:1:exon

position:1620785:1
position: 1620785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620983:1
position: 1620983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1621529-1621762:1:exon

position:1621529:1
position: 1621529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621762:1
position: 1621762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1622005-1622136:1:exon

position:1622005:1
position: 1622005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622136:1
position: 1622136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1623834-1623942:1:exon

position:1623834:1
position: 1623834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623942:1
position: 1623942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1624416-1624535:1:exon

position:1624416:1
position: 1624416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624535:1
position: 1624535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1624852-1625016:1:exon

position:1624852:1
position: 1624852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625016:1
position: 1625016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1625625-1625790:1:exon

position:1625625:1
position: 1625625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625790:1
position: 1625790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1625873-1625976:1:exon

position:1625873:1
position: 1625873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625976:1
position: 1625976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1626748-1626942:1:exon

position:1626748:1
position: 1626748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626942:1
position: 1626942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1627286-1627414:1:exon

position:1627286:1
position: 1627286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627414:1
position: 1627414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1628076-1628719:1:exon

position:1628076:1
position: 1628076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

fan1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: fan1
product: FANCD2 and FANCI associated nuclease 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178500.1
SIO_010081: fan1
subclass of: SO_0000673
so part of: fan1
location: join(1617137..1617787,1619774..1619914,1620785..1620983,1622005..1622136,1623834..1623942,1624416..1624535,1624852..1625016,1625625..1625790,1625873..1625976,1626748..1626942,1627286..1627414,1628076..1628719)
location: region:1617137-1628719:1
so has part: feature:1617137-1617787:1:exon
so has part: feature:1619774-1619914:1:exon
so has part: feature:1620785-1620983:1:exon
so has part: feature:1622005-1622136:1:exon
so has part: feature:1623834-1623942:1:exon
so has part: feature:1624416-1624535:1:exon
so has part: feature:1624852-1625016:1:exon
so has part: feature:1625625-1625790:1:exon
so has part: feature:1625873-1625976:1:exon
so has part: feature:1626748-1626942:1:exon
so has part: feature:1627286-1627414:1:exon
so has part: feature:1628076-1628719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1617137-1617787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619774-1619914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620785-1620983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1622005-1622136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1623834-1623942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1624416-1624535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1624852-1625016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1625625-1625790:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1625873-1625976:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1626748-1626942:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1627286-1627414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1628076-1628719:1:exon

fan1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: fan1
product: FANCD2 and FANCI associated nuclease 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178499.1
SIO_010081: fan1
subclass of: SO_0000673
so part of: fan1
location: join(1617138..1617787,1619774..1619914,1620785..1620983,1621529..1621762,1622005..1622136,1623834..1623942,1624416..1624535,1625625..1625790,1625873..1625976,1626748..1626942,1627286..1627414,1628076..1628719)
location: region:1617138-1628719:1
so has part: feature:1617138-1617787:1:exon
so has part: feature:1619774-1619914:1:exon
so has part: feature:1620785-1620983:1:exon
so has part: feature:1621529-1621762:1:exon
so has part: feature:1622005-1622136:1:exon
so has part: feature:1623834-1623942:1:exon
so has part: feature:1624416-1624535:1:exon
so has part: feature:1625625-1625790:1:exon
so has part: feature:1625873-1625976:1:exon
so has part: feature:1626748-1626942:1:exon
so has part: feature:1627286-1627414:1:exon
so has part: feature:1628076-1628719:1:exon

position:1617138:1
position: 1617138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617138-1617787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619774-1619914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620785-1620983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621529-1621762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1622005-1622136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1623834-1623942:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1624416-1624535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1625625-1625790:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1625873-1625976:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1626748-1626942:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1627286-1627414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1628076-1628719:1:exon

fan1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: fan1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fanconi-associated nuclease 1 isoform X1
translation: MFSPVRKRPCSGLSLRARRSNASAGDGPEASDRGLLEIAAEPEAALPAGNSGSGAEEKSGQESGSRRWSKLSRRYRKAAPAPELEPGSEAGRLSGAGAAAPAEASGRGDEAPEPAEGEERFPLPYYLRNFLMVLEAVLGSEDKELFNDGDELWLRTFGKLSVAGQKLYVRLFQRKLNWLKITKLNYPEIGLDLTPSIEELRLAGLLQTGSELCDVSEALDLLSAPELKLLAKSFHLRPQGQRAEILKSLLRLAKQQSIFSCNQNPSSPGLAILNRTKELLGHCVRVAAPARAVFSRVLLLFNLTEWTDEEEAAAAGQSQLSTVVIANMGHVTFPSYTVLREKKIFRHRDDLLRYVEAIYSLAEVLTAMTRGTWSDALQIYKTAREKWIQLENSNDIRFHQELPVYLRCFTVGWVYTRIRFRGVEILQRLHMYEEAVEELKSLLEQSIYCPESRGRWWNRLSLNLHQHLKQTEQAIQCLRKGLDDVWVHTGHRLALYQRAIRIRDSPSCKKWHHLLQDLPVMRVEDVSHVMIKGRTCPGMGNSLFLMENTSEGPNLGQGEPCSTVICSVEEVSLAHYRQQGFDQGIHGEGAIFLTLFGLFFWDIIFLSGIPDVFRNPYQACPLDLYTDCFYQHRREPIESRVEFLQDAPIETLHRLMADVWNNHRNTTATLINWEIFSSLQQAQSLVSCLGGLFLSGICSILAKNLRHCRGGLPDLVVWNSHSLQYKLSEVKGPTDQLSHKQMVWLDQLRRLGADVEVCHVSAVGARSHQLSSCQ
SIO_010081: fan1
subclass of: SO_0000673
so part of: fan1
location: join(1617304..1617787,1619774..1619914,1620785..1620983,1621529..1621762,1622005..1622136,1623834..1623942,1624416..1624535,1624852..1625016,1625625..1625790,1625873..1625976,1626748..1626942,1627286..1627414,1628076..1628222)
location: region:1617304-1628222:1
so has part: feature:1617304-1617787:1:exon
so has part: feature:1619774-1619914:1:exon
so has part: feature:1620785-1620983:1:exon
so has part: feature:1621529-1621762:1:exon
so has part: feature:1622005-1622136:1:exon
so has part: feature:1623834-1623942:1:exon
so has part: feature:1624416-1624535:1:exon
so has part: feature:1624852-1625016:1:exon
so has part: feature:1625625-1625790:1:exon
so has part: feature:1625873-1625976:1:exon
so has part: feature:1626748-1626942:1:exon
so has part: feature:1627286-1627414:1:exon
so has part: feature:1628076-1628222:1:exon

XP_041034432.1
type: Protein
SIO_000068: ncbiprotein

position:1617304:1
position: 1617304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628222:1
position: 1628222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617304-1617787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619774-1619914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620785-1620983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621529-1621762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1622005-1622136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1623834-1623942:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1624416-1624535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1624852-1625016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1625625-1625790:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1625873-1625976:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1626748-1626942:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1627286-1627414:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1628076-1628222:1:exon

fan1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: fan1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fanconi-associated nuclease 1 isoform X2
translation: MFSPVRKRPCSGLSLRARRSNASAGDGPEASDRGLLEIAAEPEAALPAGNSGSGAEEKSGQESGSRRWSKLSRRYRKAAPAPELEPGSEAGRLSGAGAAAPAEASGRGDEAPEPAEGEERFPLPYYLRNFLMVLEAVLGSEDKELFNDGDELWLRTFGKLSVAGQKLYVRLFQRKLNWLKITKLNYPEIGLDLTPSIEELRLAGLLQTGSELCDVSEALDLLSAPELKLLAKSFHLRPQGQRAEILKSLLRLAKQQSIFSCNQNPSSPGLAILNRTKELLGHCVRVAAPARAVFSRVLLLFNLTEWTDEEEAAAAGQSQLSTVVIANMGHVTFPSYTVLREKKIFRHRDDLLRYVEAIYSLAEVLTAMTRGTWSDALQIYKTAREKWIQLENSNDIRFHQELPVYLRCFTVGWVYTRIRFRGVEILQRLHMYEEAVEELKSLLEQSIYCPESRGRWWNRLSLNLHQHLKQTEQVMIKGRTCPGMGNSLFLMENTSEGPNLGQGEPCSTVICSVEEVSLAHYRQQGFDQGIHGEGAIFLTLFGLFFWDIIFLSGIPDVFRNPYQACPLDLYTDCFYQHRREPIESRVEFLQDAPIETLHRLMADVWNNHRNTTATLINWEIFSSLQQAQSLVSCLGGLFLSGICSILAKNLRHCRGGLPDLVVWNSHSLQYKLSEVKGPTDQLSHKQMVWLDQLRRLGADVEVCHVSAVGARSHQLSSCQ
SIO_010081: fan1
subclass of: SO_0000673
so part of: fan1
location: join(1617304..1617787,1619774..1619914,1620785..1620983,1621529..1621762,1622005..1622136,1623834..1623942,1624416..1624535,1625625..1625790,1625873..1625976,1626748..1626942,1627286..1627414,1628076..1628222)
location: region:1617304-1628222:1
so has part: feature:1617304-1617787:1:exon
so has part: feature:1619774-1619914:1:exon
so has part: feature:1620785-1620983:1:exon
so has part: feature:1621529-1621762:1:exon
so has part: feature:1622005-1622136:1:exon
so has part: feature:1623834-1623942:1:exon
so has part: feature:1624416-1624535:1:exon
so has part: feature:1625625-1625790:1:exon
so has part: feature:1625873-1625976:1:exon
so has part: feature:1626748-1626942:1:exon
so has part: feature:1627286-1627414:1:exon
so has part: feature:1628076-1628222:1:exon

XP_041034433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1617304-1617787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619774-1619914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620785-1620983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621529-1621762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1622005-1622136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1623834-1623942:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1624416-1624535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1625625-1625790:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1625873-1625976:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1626748-1626942:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1627286-1627414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1628076-1628222:1:exon

fan1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: fan1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fanconi-associated nuclease 1 isoform X3
translation: MFSPVRKRPCSGLSLRARRSNASAGDGPEASDRGLLEIAAEPEAALPAGNSGSGAEEKSGQESGSRRWSKLSRRYRKAAPAPELEPGSEAGRLSGAGAAAPAEASGRGDEAPEPAEGEERFPLPYYLRNFLMVLEAVLGSEDKELFNDGDELWLRTFGKLSVAGQKLYVRLFQRKLNWLKITKLNYPEIGLDLTPSIEELRLAGLLQTGSELCDVSEALDLLSAPELKLLAKSFHLRPQGQRAEILKSLLRLAKQQSIFSCNQNPSSPGLAILNRYVEAIYSLAEVLTAMTRGTWSDALQIYKTAREKWIQLENSNDIRFHQELPVYLRCFTVGWVYTRIRFRGVEILQRLHMYEEAVEELKSLLEQSIYCPESRGRWWNRLSLNLHQHLKQTEQAIQCLRKGLDDVWVHTGHRLALYQRAIRIRDSPSCKKWHHLLQDLPVMRVEDVSHVMIKGRTCPGMGNSLFLMENTSEGPNLGQGEPCSTVICSVEEVSLAHYRQQGFDQGIHGEGAIFLTLFGLFFWDIIFLSGIPDVFRNPYQACPLDLYTDCFYQHRREPIESRVEFLQDAPIETLHRLMADVWNNHRNTTATLINWEIFSSLQQAQSLVSCLGGLFLSGICSILAKNLRHCRGGLPDLVVWNSHSLQYKLSEVKGPTDQLSHKQMVWLDQLRRLGADVEVCHVSAVGARSHQLSSCQ
SIO_010081: fan1
subclass of: SO_0000673
so part of: fan1
location: join(1617304..1617787,1619774..1619914,1620785..1620983,1622005..1622136,1623834..1623942,1624416..1624535,1624852..1625016,1625625..1625790,1625873..1625976,1626748..1626942,1627286..1627414,1628076..1628222)
location: region:1617304-1628222:1
so has part: feature:1617304-1617787:1:exon
so has part: feature:1619774-1619914:1:exon
so has part: feature:1620785-1620983:1:exon
so has part: feature:1622005-1622136:1:exon
so has part: feature:1623834-1623942:1:exon
so has part: feature:1624416-1624535:1:exon
so has part: feature:1624852-1625016:1:exon
so has part: feature:1625625-1625790:1:exon
so has part: feature:1625873-1625976:1:exon
so has part: feature:1626748-1626942:1:exon
so has part: feature:1627286-1627414:1:exon
so has part: feature:1628076-1628222:1:exon

XP_041034434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1617304-1617787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619774-1619914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620785-1620983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1622005-1622136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1623834-1623942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1624416-1624535:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1624852-1625016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1625625-1625790:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1625873-1625976:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1626748-1626942:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1627286-1627414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1628076-1628222:1:exon

mtmr10
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: mtmr10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1634694..1668098)
location: region:1634694-1668098:-1
so has part: feature:1634694-1668098:-1:exon
subclass of: SO_0000010

121272084
type: Gene
SIO_000068: ncbigene

position:1634694:-1
position: 1634694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1668098:-1
position: 1668098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1634694-1668098:-1:exon

mtmr10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: mtmr10
product: myotubularin related protein 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178525.1
SIO_010081: mtmr10
subclass of: SO_0000673
so part of: mtmr10
location: complement(join(1634694..1636436,1637206..1637385,1638873..1639043,1640859..1641031,1642001..1642071,1643240..1643309,1644588..1644718,1645958..1646046,1646784..1646871,1647126..1647276,1648006..1648096,1650127..1650269,1653284..1653356,1660861..1660997,1667840..1667897,1668004..1668098))
location: region:1634694-1668098:-1
so has part: feature:1668004-1668098:-1:exon
so has part: feature:1667840-1667897:-1:exon
so has part: feature:1660861-1660997:-1:exon
so has part: feature:1653284-1653356:-1:exon
so has part: feature:1650127-1650269:-1:exon
so has part: feature:1648006-1648096:-1:exon
so has part: feature:1647126-1647276:-1:exon
so has part: feature:1646784-1646871:-1:exon
so has part: feature:1645958-1646046:-1:exon
so has part: feature:1644588-1644718:-1:exon
so has part: feature:1643240-1643309:-1:exon
so has part: feature:1642001-1642071:-1:exon
so has part: feature:1640859-1641031:-1:exon
so has part: feature:1638873-1639043:-1:exon
so has part: feature:1637206-1637385:-1:exon
so has part: feature:1634694-1636436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1668004-1668098:-1:exon

position:1668004:-1
position: 1668004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1667840-1667897:-1:exon

position:1667840:-1
position: 1667840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667897:-1
position: 1667897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1660861-1660997:-1:exon

position:1660861:-1
position: 1660861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1660997:-1
position: 1660997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1653284-1653356:-1:exon

position:1653284:-1
position: 1653284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1653356:-1
position: 1653356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1650127-1650269:-1:exon

position:1650127:-1
position: 1650127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1650269:-1
position: 1650269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1648006-1648096:-1:exon

position:1648006:-1
position: 1648006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648096:-1
position: 1648096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1647126-1647276:-1:exon

position:1647126:-1
position: 1647126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1647276:-1
position: 1647276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1646784-1646871:-1:exon

position:1646784:-1
position: 1646784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1646871:-1
position: 1646871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1645958-1646046:-1:exon

position:1645958:-1
position: 1645958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1646046:-1
position: 1646046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1644588-1644718:-1:exon

position:1644588:-1
position: 1644588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1644718:-1
position: 1644718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1643240-1643309:-1:exon

position:1643240:-1
position: 1643240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1643309:-1
position: 1643309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1642001-1642071:-1:exon

position:1642001:-1
position: 1642001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642071:-1
position: 1642071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1640859-1641031:-1:exon

position:1640859:-1
position: 1640859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1641031:-1
position: 1641031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1638873-1639043:-1:exon

position:1638873:-1
position: 1638873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1639043:-1
position: 1639043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1637206-1637385:-1:exon

position:1637206:-1
position: 1637206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1637385:-1
position: 1637385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1634694-1636436:-1:exon

position:1636436:-1
position: 1636436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mtmr10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: mtmr10
product: myotubularin related protein 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178524.1
SIO_010081: mtmr10
subclass of: SO_0000673
so part of: mtmr10
location: complement(join(1634694..1636439,1637206..1637385,1638873..1639043,1640859..1641031,1642001..1642071,1643240..1643309,1644588..1644718,1645958..1646046,1646784..1646871,1647126..1647276,1648006..1648096,1650127..1650269,1653284..1653356,1660861..1660997,1667840..1667897,1668004..1668098))
location: region:1634694-1668098:-1
so has part: feature:1668004-1668098:-1:exon
so has part: feature:1667840-1667897:-1:exon
so has part: feature:1660861-1660997:-1:exon
so has part: feature:1653284-1653356:-1:exon
so has part: feature:1650127-1650269:-1:exon
so has part: feature:1648006-1648096:-1:exon
so has part: feature:1647126-1647276:-1:exon
so has part: feature:1646784-1646871:-1:exon
so has part: feature:1645958-1646046:-1:exon
so has part: feature:1644588-1644718:-1:exon
so has part: feature:1643240-1643309:-1:exon
so has part: feature:1642001-1642071:-1:exon
so has part: feature:1640859-1641031:-1:exon
so has part: feature:1638873-1639043:-1:exon
so has part: feature:1637206-1637385:-1:exon
so has part: feature:1634694-1636439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1668004-1668098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1667840-1667897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1660861-1660997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653284-1653356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1650127-1650269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1648006-1648096:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1647126-1647276:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1646784-1646871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1645958-1646046:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1644588-1644718:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1643240-1643309:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1642001-1642071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1640859-1641031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1638873-1639043:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1637206-1637385:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1634694-1636439:-1:exon

position:1636439:-1
position: 1636439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

mtmr10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: mtmr10
product: myotubularin related protein 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178526.1
SIO_010081: mtmr10
subclass of: SO_0000673
so part of: mtmr10
location: complement(join(1634694..1636439,1637206..1637385,1638873..1639043,1640859..1641031,1642001..1642071,1643240..1643309,1644588..1644718,1645958..1646046,1646784..1646871,1647126..1647276,1648006..1648096,1650127..1650269,1653284..1653356,1660563..1660591))
location: region:1634694-1660591:-1
so has part: feature:1660563-1660591:-1:exon
so has part: feature:1653284-1653356:-1:exon
so has part: feature:1650127-1650269:-1:exon
so has part: feature:1648006-1648096:-1:exon
so has part: feature:1647126-1647276:-1:exon
so has part: feature:1646784-1646871:-1:exon
so has part: feature:1645958-1646046:-1:exon
so has part: feature:1644588-1644718:-1:exon
so has part: feature:1643240-1643309:-1:exon
so has part: feature:1642001-1642071:-1:exon
so has part: feature:1640859-1641031:-1:exon
so has part: feature:1638873-1639043:-1:exon
so has part: feature:1637206-1637385:-1:exon
so has part: feature:1634694-1636439:-1:exon

position:1660591:-1
position: 1660591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660563-1660591:-1:exon

position:1660563:-1
position: 1660563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1653284-1653356:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1650127-1650269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1648006-1648096:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647126-1647276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1646784-1646871:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1645958-1646046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1644588-1644718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1643240-1643309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642001-1642071:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640859-1641031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1638873-1639043:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1637206-1637385:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1634694-1636439:-1:exon

mtmr10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: mtmr10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 10 isoform X2
translation: MFRVSGMKSSKPSFRSYLPPAESSFPSRAEVSRACEAALLPGELVVSETSNVRKCIATDTSAHDLYGTLLCTNFKISFITKDVTPFRKFQYRNLLLEEHDISLTCVDQVVAVNDERKKRKVLGPNQCLKFKPTELIIYCKDFRIIRFRFDESIPESARKICLVIAHYSQPKDLQLLFGFAYAKEKCHNSVGNMNGTDPEMDGLQTSLFESYSDWDREIKRTGASEWRVCSVNEHYATSTSLPEYFVVPSSLADEDLKQLVPSFNGDRIPMWCWHHWTGSALVRMANIKPGPKLRKHNTRILKAIAQSHPEKSEVFKSDLDKNLPSISEVQAALVRLKQLCINDLFEETDEKWLSSLENTRWLEYVRLFLKHSTELTQWVYSENISVIIQEEEGRDLSCVIASVVQVMLDPHFRTILGFQSLIQKEWIVAGYRFLDRCNHLGESEKHECPLFLLFLDCVWQLLQQFPAAFEFTETYLTVLYDSLRIPLFGTFLFNSPYQRMQQSQDFAANGNLQSEGRGLELPSVWNWSLQFTAKDLSLFNNPLYVGKSVTCVQNGTIKSFKRAKNSSSIYSVYTMKNGKLSDQHDFFPRRNSIQRPSPDLVQLNESYDCNMERYFRDWLSKPLDLHGIILPHLSSAHAQLWKQCYLRWIPEAQITNGGFISAFHKISLLADDIETLQQRLRQYWSDSCLSGSPKSRSHRMYFRAKDFSETSGTLDCFSSSFPFSPVGNLCRRSILGTPLNKFLLTAAKTWPSTETLANED
SIO_010081: mtmr10
subclass of: SO_0000673
so part of: mtmr10
location: complement(join(1635846..1636436,1637206..1637385,1638873..1639043,1640859..1641031,1642001..1642071,1643240..1643309,1644588..1644718,1645958..1646046,1646784..1646871,1647126..1647276,1648006..1648096,1650127..1650269,1653284..1653356,1660861..1660997,1667840..1667897,1668004..1668069))
location: region:1635846-1668069:-1
so has part: feature:1668004-1668069:-1:exon
so has part: feature:1667840-1667897:-1:exon
so has part: feature:1660861-1660997:-1:exon
so has part: feature:1653284-1653356:-1:exon
so has part: feature:1650127-1650269:-1:exon
so has part: feature:1648006-1648096:-1:exon
so has part: feature:1647126-1647276:-1:exon
so has part: feature:1646784-1646871:-1:exon
so has part: feature:1645958-1646046:-1:exon
so has part: feature:1644588-1644718:-1:exon
so has part: feature:1643240-1643309:-1:exon
so has part: feature:1642001-1642071:-1:exon
so has part: feature:1640859-1641031:-1:exon
so has part: feature:1638873-1639043:-1:exon
so has part: feature:1637206-1637385:-1:exon
so has part: feature:1635846-1636436:-1:exon

XP_041034459.1
type: Protein
SIO_000068: ncbiprotein

position:1635846:-1
position: 1635846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1668069:-1
position: 1668069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1668004-1668069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1667840-1667897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1660861-1660997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653284-1653356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1650127-1650269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1648006-1648096:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1647126-1647276:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1646784-1646871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1645958-1646046:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1644588-1644718:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1643240-1643309:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1642001-1642071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1640859-1641031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1638873-1639043:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1637206-1637385:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1635846-1636436:-1:exon

mtmr10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: mtmr10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 10 isoform X1
translation: MFRVSGMKSSKPSFRSYLPPAESSFPSRAEVSRACEAALLPGELVVSETSNVRKCIATDTSAHDLYGTLLCTNFKISFITKDVTPFRKFQYRNLLLEEHDISLTCVDQVVAVNDERKKRKVLGPNQCLKFKPTELIIYCKDFRIIRFRFDESIPESARKICLVIAHYSQPKDLQLLFGFAYAKEKCHNSVGNMNGTDPEMDGLQTSLFESYSDWDREIKRTGASEWRVCSVNEHYATSTSLPEYFVVPSSLADEDLKQLVPSFNGDRIPMWCWHHWTGSALVRMANIKPGPKLRKHNTRILKAIAQSHPEKSEVFKSDLDKNLPSISEVQAALVRLKQLCINDLFEETDEKWLSSLENTRWLEYVRLFLKHSTELTQWVYSENISVIIQEEEGRDLSCVIASVVQVMLDPHFRTILGFQSLIQKEWIVAGYRFLDRCNHLGESEKHECPLFLLFLDCVWQLLQQFPAAFEFTETYLTVLYDSLRIPLFGTFLFNSPYQRMQQSQDFAANGNLQSEGRGLELPSVWNWSLQFTAKDLSLFNNPLYVGKSVTCVQNGTIKSFKRAKKNSSSIYSVYTMKNGKLSDQHDFFPRRNSIQRPSPDLVQLNESYDCNMERYFRDWLSKPLDLHGIILPHLSSAHAQLWKQCYLRWIPEAQITNGGFISAFHKISLLADDIETLQQRLRQYWSDSCLSGSPKSRSHRMYFRAKDFSETSGTLDCFSSSFPFSPVGNLCRRSILGTPLNKFLLTAAKTWPSTETLANED
SIO_010081: mtmr10
subclass of: SO_0000673
so part of: mtmr10
location: complement(join(1635846..1636439,1637206..1637385,1638873..1639043,1640859..1641031,1642001..1642071,1643240..1643309,1644588..1644718,1645958..1646046,1646784..1646871,1647126..1647276,1648006..1648096,1650127..1650269,1653284..1653356,1660861..1660997,1667840..1667897,1668004..1668069))
location: region:1635846-1668069:-1
so has part: feature:1668004-1668069:-1:exon
so has part: feature:1667840-1667897:-1:exon
so has part: feature:1660861-1660997:-1:exon
so has part: feature:1653284-1653356:-1:exon
so has part: feature:1650127-1650269:-1:exon
so has part: feature:1648006-1648096:-1:exon
so has part: feature:1647126-1647276:-1:exon
so has part: feature:1646784-1646871:-1:exon
so has part: feature:1645958-1646046:-1:exon
so has part: feature:1644588-1644718:-1:exon
so has part: feature:1643240-1643309:-1:exon
so has part: feature:1642001-1642071:-1:exon
so has part: feature:1640859-1641031:-1:exon
so has part: feature:1638873-1639043:-1:exon
so has part: feature:1637206-1637385:-1:exon
so has part: feature:1635846-1636439:-1:exon

XP_041034458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1668004-1668069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1667840-1667897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1660861-1660997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653284-1653356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1650127-1650269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1648006-1648096:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1647126-1647276:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1646784-1646871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1645958-1646046:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1644588-1644718:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1643240-1643309:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1642001-1642071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1640859-1641031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1638873-1639043:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1637206-1637385:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1635846-1636439:-1:exon

mtmr10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: mtmr10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 10 isoform X3
translation: MKRTFFFAKFQYRNLLLEEHDISLTCVDQVVAVNDERKKRKVLGPNQCLKFKPTELIIYCKDFRIIRFRFDESIPESARKICLVIAHYSQPKDLQLLFGFAYAKEKCHNSVGNMNGTDPEMDGLQTSLFESYSDWDREIKRTGASEWRVCSVNEHYATSTSLPEYFVVPSSLADEDLKQLVPSFNGDRIPMWCWHHWTGSALVRMANIKPGPKLRKHNTRILKAIAQSHPEKSEVFKSDLDKNLPSISEVQAALVRLKQLCINDLFEETDEKWLSSLENTRWLEYVRLFLKHSTELTQWVYSENISVIIQEEEGRDLSCVIASVVQVMLDPHFRTILGFQSLIQKEWIVAGYRFLDRCNHLGESEKHECPLFLLFLDCVWQLLQQFPAAFEFTETYLTVLYDSLRIPLFGTFLFNSPYQRMQQSQDFAANGNLQSEGRGLELPSVWNWSLQFTAKDLSLFNNPLYVGKSVTCVQNGTIKSFKRAKKNSSSIYSVYTMKNGKLSDQHDFFPRRNSIQRPSPDLVQLNESYDCNMERYFRDWLSKPLDLHGIILPHLSSAHAQLWKQCYLRWIPEAQITNGGFISAFHKISLLADDIETLQQRLRQYWSDSCLSGSPKSRSHRMYFRAKDFSETSGTLDCFSSSFPFSPVGNLCRRSILGTPLNKFLLTAAKTWPSTETLANED
SIO_010081: mtmr10
subclass of: SO_0000673
so part of: mtmr10
location: complement(join(1635846..1636439,1637206..1637385,1638873..1639043,1640859..1641031,1642001..1642071,1643240..1643309,1644588..1644718,1645958..1646046,1646784..1646871,1647126..1647276,1648006..1648096,1650127..1650269,1653284..1653356,1660563..1660586))
location: region:1635846-1660586:-1
so has part: feature:1660563-1660586:-1:exon
so has part: feature:1653284-1653356:-1:exon
so has part: feature:1650127-1650269:-1:exon
so has part: feature:1648006-1648096:-1:exon
so has part: feature:1647126-1647276:-1:exon
so has part: feature:1646784-1646871:-1:exon
so has part: feature:1645958-1646046:-1:exon
so has part: feature:1644588-1644718:-1:exon
so has part: feature:1643240-1643309:-1:exon
so has part: feature:1642001-1642071:-1:exon
so has part: feature:1640859-1641031:-1:exon
so has part: feature:1638873-1639043:-1:exon
so has part: feature:1637206-1637385:-1:exon
so has part: feature:1635846-1636439:-1:exon

XP_041034460.1
type: Protein
SIO_000068: ncbiprotein

position:1660586:-1
position: 1660586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660563-1660586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653284-1653356:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1650127-1650269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1648006-1648096:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647126-1647276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1646784-1646871:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1645958-1646046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1644588-1644718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1643240-1643309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1642001-1642071:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640859-1641031:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1638873-1639043:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1637206-1637385:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1635846-1636439:-1:exon

LOC121271949
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121271949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1675577..1747546)
location: region:1675577-1747546:-1
so has part: feature:1675577-1747546:-1:exon
subclass of: SO_0000010

121271949
type: Gene
SIO_000068: ncbigene

position:1675577:-1
position: 1675577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747546:-1
position: 1747546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675577-1747546:-1:exon

LOC121271949
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121271949
product: transient receptor potential cation channel subfamily M member 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041178205.1
SIO_010081: LOC121271949
subclass of: SO_0000673
so part of: LOC121271949
location: complement(join(1675577..1676831,1678261..1678393,1687674..1687864,1688350..1688494,1689404..1689424,1690631..1690805,1697189..1697440,1698786..1698914,1699581..1699712,1700730..1700849,1701403..1701631,1702219..1702511,1709981..1710010,1711468..1711608,1713561..1713611,1715536..1715670,1715762..1715911,1727737..1727837,1729266..1729338,1730223..1730346,1731145..1731319,1732852..1733023,1733760..1733884,1739353..1739566,1741337..1741529,1741647..1741726,1747466..1747546))
location: region:1675577-1747546:-1
so has part: feature:1747466-1747546:-1:exon
so has part: feature:1741647-1741726:-1:exon
so has part: feature:1741337-1741529:-1:exon
so has part: feature:1739353-1739566:-1:exon
so has part: feature:1733760-1733884:-1:exon
so has part: feature:1732852-1733023:-1:exon
so has part: feature:1731145-1731319:-1:exon
so has part: feature:1730223-1730346:-1:exon
so has part: feature:1729266-1729338:-1:exon
so has part: feature:1727737-1727837:-1:exon
so has part: feature:1715762-1715911:-1:exon
so has part: feature:1715536-1715670:-1:exon
so has part: feature:1713561-1713611:-1:exon
so has part: feature:1711468-1711608:-1:exon
so has part: feature:1709981-1710010:-1:exon
so has part: feature:1702219-1702511:-1:exon
so has part: feature:1701403-1701631:-1:exon
so has part: feature:1700730-1700849:-1:exon
so has part: feature:1699581-1699712:-1:exon
so has part: feature:1698786-1698914:-1:exon
so has part: feature:1697189-1697440:-1:exon
so has part: feature:1690631-1690805:-1:exon
so has part: feature:1689404-1689424:-1:exon
so has part: feature:1688350-1688494:-1:exon
so has part: feature:1687674-1687864:-1:exon
so has part: feature:1678261-1678393:-1:exon
so has part: feature:1675577-1676831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1747466-1747546:-1:exon

position:1747466:-1
position: 1747466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1741647-1741726:-1:exon

position:1741647:-1
position: 1741647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741726:-1
position: 1741726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1741337-1741529:-1:exon

position:1741337:-1
position: 1741337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741529:-1
position: 1741529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1739353-1739566:-1:exon

position:1739353:-1
position: 1739353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1739566:-1
position: 1739566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1733760-1733884:-1:exon

position:1733760:-1
position: 1733760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733884:-1
position: 1733884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1732852-1733023:-1:exon

position:1732852:-1
position: 1732852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733023:-1
position: 1733023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1731145-1731319:-1:exon

position:1731145:-1
position: 1731145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731319:-1
position: 1731319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1730223-1730346:-1:exon

position:1730223:-1
position: 1730223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1730346:-1
position: 1730346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1729266-1729338:-1:exon

position:1729266:-1
position: 1729266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1729338:-1
position: 1729338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1727737-1727837:-1:exon

position:1727737:-1
position: 1727737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1727837:-1
position: 1727837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1715762-1715911:-1:exon

position:1715762:-1
position: 1715762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1715911:-1
position: 1715911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1715536-1715670:-1:exon

position:1715536:-1
position: 1715536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1715670:-1
position: 1715670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1713561-1713611:-1:exon

position:1713561:-1
position: 1713561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1713611:-1
position: 1713611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1711468-1711608:-1:exon

position:1711468:-1
position: 1711468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1711608:-1
position: 1711608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1709981-1710010:-1:exon

position:1709981:-1
position: 1709981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710010:-1
position: 1710010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1702219-1702511:-1:exon

position:1702219:-1
position: 1702219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1702511:-1
position: 1702511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1701403-1701631:-1:exon

position:1701403:-1
position: 1701403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1701631:-1
position: 1701631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1700730-1700849:-1:exon

position:1700730:-1
position: 1700730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1700849:-1
position: 1700849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1699581-1699712:-1:exon

position:1699581:-1
position: 1699581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1699712:-1
position: 1699712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1698786-1698914:-1:exon

position:1698786:-1
position: 1698786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698914:-1
position: 1698914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1697189-1697440:-1:exon

position:1697189:-1
position: 1697189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1697440:-1
position: 1697440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1690631-1690805:-1:exon

position:1690631:-1
position: 1690631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690805:-1
position: 1690805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1689404-1689424:-1:exon

position:1689404:-1
position: 1689404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689424:-1
position: 1689424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1688350-1688494:-1:exon

position:1688350:-1
position: 1688350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1688494:-1
position: 1688494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1687674-1687864:-1:exon

position:1687674:-1
position: 1687674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687864:-1
position: 1687864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1678261-1678393:-1:exon

position:1678261:-1
position: 1678261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678393:-1
position: 1678393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1675577-1676831:-1:exon

position:1676831:-1
position: 1676831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121271949
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121271949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transient receptor potential cation channel subfamily M member 1-like
translation: MLTSSLKKMSGSLKRNSIKRTISGSQKGHKAWIEKNFQKRDCICVVPNPKDPQRCGCGQQIGQHVIIPPTAPSSETGEEEKQLVQPEKWMPSKHTQASPTDAFGAMEFQGGGHASKAMYIRVSYDTKPDLLLQLMTSEWELELPKLLISVHGGLQNFELQPKLKQVFGKGLIKAAMTTGAWIFTAGVNTGVIRHVGDALKDHSSKSCGRICAIGFAPWGIVENKMDLIGKDVTKPYQTMSNPLSKLTVLNNTHSHFILADNGSLGKYGAEVRLRRQLEKHISLQKINTRLGQGVPVVCLIVEGGPNVISIVLESLREDPPVPVVVCDGSGRASDILAFAHKYSEEGGIISESVRDQLMVTVQKTFSYSRQQAQQLFVSIMDCMKKKALITVFRMGSEGQQDIDLAILTALLKGTNASAPDQLSLAMAWNRVDIARNQIFVFGNHWPPMGSSSGPATQEPKRSVKQRATKVKGKGKKRGKDEVKEETDPRKLELLNWVNSLEQAMIDALVLDRVDFVKLLIENGVNIHNFLTIPRLEELYNTRLGPPNTLHYLVRDVKKGNLPPDYHISLIDIGLVIEYLMGGAYRCAYTRKTFRTLYNNLFGPKRPKALKLLGMEDDEPPSKSKRKKKKKKEEEIDIDEDDPAIGRFTYPYHELLLWAVLMKRQRMALFFWQHGEEALAKALVACKLYKAMSNECSGSELVDDISQDLENNSKDFGQLAVDLLDQSYKHDEQVAMKLLTYELKNWSDSTCLKLAVTAKHRDFIAHTCSQMLLTDMWMGRLHMRKNPGLKIMLGIIFPPAILFMEFKGSDDLSYEASGDNEQGKEKEEDNDANTEAVSRKGDEEEGMENHRSIPIGRKIYEFYNAPIVKFWFHTMAYLAYLLLYNYVILVKMEGLPSIAEWILISYILMLAVEKIREILMSEPSKLKQKVKVWMQEYWNVTDMVAIAIFSCGVLLRLQSQPYMSYGRVIYCVDIIIWYIRVLDIFGVNKYLGPYVMMIGKMMVDMLYFVVIMLVVLMSFGVSRQAILHPDEEPSWRLARNIFYMPYWMIYGEVFADQIDLYAMEINPPCGENLFDDDGKRLPPCIPGAWIIPAIMACYLLVANVLLVNLLIAVFNNTFLEVISISNQVWKFQRYQLILTFHERPVFPPPLIIFSYLSMVAHHCCRRKNKEVEERDRGLKLILSEEELKKLQEFEEQCVEQYFTQKEDREQSSNDERIRITSERVENMTMRLEEVNEREHFMKASLQTVDIRLAQLEEFSGRMVSAMEKLAGIDKAELTHTRSRCPSECDASYLIRQNSTEASSMYRFYMDGDDTNFEDSTGLMSPSMGSHRKNYSAIALRDEKELAEQKINMTPKRRFGLHQSSSTRRMKGNSPRLGVTQDPRSFNSCVDIFVSSSDGYQGPFNTKEETNYQRFLRETEADLNGKLVNEAGSLARTKLEACFSFPLEKSKEANYFPSQTYGACQTTVVKSRSVIFGLDARRFSTKTPEWVTQYERKFYKNLTEERGEEQEATHQTLPSSPETLAEQKQELTDMEDDSDTGSWALDHSPPRAEVLRTVPKSKNFLTVTPDKFISSRSKSLHGHSRQTMHMMGESFKKPKQAFSTKDLRQVCGDPRQVYRDPRRTGSSRAAGLKKKSTETFC
SIO_010081: LOC121271949
subclass of: SO_0000673
so part of: LOC121271949
location: complement(join(1675577..1676831,1678261..1678393,1687674..1687864,1688350..1688494,1689404..1689424,1690631..1690805,1697189..1697440,1698786..1698914,1699581..1699712,1700730..1700849,1701403..1701631,1702219..1702511,1709981..1710010,1711468..1711608,1713561..1713611,1715536..1715670,1715762..1715911,1727737..1727837,1729266..1729338,1730223..1730346,1731145..1731319,1732852..1733023,1733760..1733884,1739353..1739566,1741337..1741529,1741647..1741726,1747466..1747546))
location: region:1675577-1747546:-1
so has part: feature:1747466-1747546:-1:exon
so has part: feature:1741647-1741726:-1:exon
so has part: feature:1741337-1741529:-1:exon
so has part: feature:1739353-1739566:-1:exon
so has part: feature:1733760-1733884:-1:exon
so has part: feature:1732852-1733023:-1:exon
so has part: feature:1731145-1731319:-1:exon
so has part: feature:1730223-1730346:-1:exon
so has part: feature:1729266-1729338:-1:exon
so has part: feature:1727737-1727837:-1:exon
so has part: feature:1715762-1715911:-1:exon
so has part: feature:1715536-1715670:-1:exon
so has part: feature:1713561-1713611:-1:exon
so has part: feature:1711468-1711608:-1:exon
so has part: feature:1709981-1710010:-1:exon
so has part: feature:1702219-1702511:-1:exon
so has part: feature:1701403-1701631:-1:exon
so has part: feature:1700730-1700849:-1:exon
so has part: feature:1699581-1699712:-1:exon
so has part: feature:1698786-1698914:-1:exon
so has part: feature:1697189-1697440:-1:exon
so has part: feature:1690631-1690805:-1:exon
so has part: feature:1689404-1689424:-1:exon
so has part: feature:1688350-1688494:-1:exon
so has part: feature:1687674-1687864:-1:exon
so has part: feature:1678261-1678393:-1:exon
so has part: feature:1675577-1676831:-1:exon

XP_041034139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1747466-1747546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1741647-1741726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1741337-1741529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1739353-1739566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1733760-1733884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1732852-1733023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1731145-1731319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1730223-1730346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1729266-1729338:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1727737-1727837:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1715762-1715911:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1715536-1715670:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1713561-1713611:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1711468-1711608:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1709981-1710010:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1702219-1702511:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1701403-1701631:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1700730-1700849:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1699581-1699712:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1698786-1698914:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1697189-1697440:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1690631-1690805:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1689404-1689424:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1688350-1688494:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1687674-1687864:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1678261-1678393:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1675577-1676831:-1:exon

klf13
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: klf13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1768407..1785932
location: region:1768407-1785932:1
so has part: feature:1768407-1785932:1:exon
subclass of: SO_0000010

121272099
type: Gene
SIO_000068: ncbigene

position:1768407:1
position: 1768407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785932:1
position: 1785932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1768407-1785932:1:exon

klf13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: klf13
product: Kruppel-like factor 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178543.1
SIO_010081: klf13
subclass of: SO_0000673
so part of: klf13
location: join(1768407..1769123,1782551..1785932)
location: region:1768407-1785932:1
so has part: feature:1768407-1769123:1:exon
so has part: feature:1782551-1785932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1768407-1769123:1:exon

position:1769123:1
position: 1769123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1782551-1785932:1:exon

position:1782551:1
position: 1782551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

klf13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: klf13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 13
translation: MASAAFDRFAAECLVSMSRTAVVHSPAGAATPPGDNQDKGSPGSGPGPLLLLLAQAGPSADASPPEGPSSPASGKCVWEAVTPSPREPATQRGRRGAKGRSGQERRLKKHQCHYPGCGKVYGKSSHLKAHLRTHTGERPFACTWPDCNKKFARSDELARHYRTHTGEKRFSCPICEKRFMRSDHLMKHARRHANFQPSMLKRPHSSRPGSVSDYSRSDASSPALSPASSP
SIO_010081: klf13
subclass of: SO_0000673
so part of: klf13
location: join(1768718..1769123,1782551..1782837)
location: region:1768718-1782837:1
so has part: feature:1768718-1769123:1:exon
so has part: feature:1782551-1782837:1:exon

XP_041034477.1
type: Protein
SIO_000068: ncbiprotein

position:1768718:1
position: 1768718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782837:1
position: 1782837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1768718-1769123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1782551-1782837:1:exon

otud7a
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: otud7a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1802738..1940685)
location: region:1802738-1940685:-1
so has part: feature:1802738-1940685:-1:exon
subclass of: SO_0000010

121272120
type: Gene
SIO_000068: ncbigene

position:1802738:-1
position: 1802738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940685:-1
position: 1940685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1802738-1940685:-1:exon

otud7a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: otud7a
product: OTU deubiquitinase 7A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178593.1
SIO_010081: otud7a
subclass of: SO_0000673
so part of: otud7a
location: complement(join(1802738..1806651,1807590..1807674,1808026..1808140,1826694..1826843,1828299..1828426,1839975..1840087,1844183..1844310,1845463..1845564,1855662..1855880,1867253..1867423,1876255..1876409,1880054..1880191,1883259..1883384,1883499..1883568,1940398..1940469,1940560..1940685))
location: region:1802738-1940685:-1
so has part: feature:1940560-1940685:-1:exon
so has part: feature:1940398-1940469:-1:exon
so has part: feature:1883499-1883568:-1:exon
so has part: feature:1883259-1883384:-1:exon
so has part: feature:1880054-1880191:-1:exon
so has part: feature:1876255-1876409:-1:exon
so has part: feature:1867253-1867423:-1:exon
so has part: feature:1855662-1855880:-1:exon
so has part: feature:1845463-1845564:-1:exon
so has part: feature:1844183-1844310:-1:exon
so has part: feature:1839975-1840087:-1:exon
so has part: feature:1828299-1828426:-1:exon
so has part: feature:1826694-1826843:-1:exon
so has part: feature:1808026-1808140:-1:exon
so has part: feature:1807590-1807674:-1:exon
so has part: feature:1802738-1806651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1940560-1940685:-1:exon

position:1940560:-1
position: 1940560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1940398-1940469:-1:exon

position:1940398:-1
position: 1940398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940469:-1
position: 1940469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1883499-1883568:-1:exon

position:1883499:-1
position: 1883499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883568:-1
position: 1883568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1883259-1883384:-1:exon

position:1883259:-1
position: 1883259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883384:-1
position: 1883384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1880054-1880191:-1:exon

position:1880054:-1
position: 1880054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1880191:-1
position: 1880191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1876255-1876409:-1:exon

position:1876255:-1
position: 1876255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876409:-1
position: 1876409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1867253-1867423:-1:exon

position:1867253:-1
position: 1867253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1867423:-1
position: 1867423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1855662-1855880:-1:exon

position:1855662:-1
position: 1855662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855880:-1
position: 1855880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1845463-1845564:-1:exon

position:1845463:-1
position: 1845463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1845564:-1
position: 1845564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1844183-1844310:-1:exon

position:1844183:-1
position: 1844183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1844310:-1
position: 1844310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1839975-1840087:-1:exon

position:1839975:-1
position: 1839975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1840087:-1
position: 1840087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1828299-1828426:-1:exon

position:1828299:-1
position: 1828299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828426:-1
position: 1828426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1826694-1826843:-1:exon

position:1826694:-1
position: 1826694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1826843:-1
position: 1826843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1808026-1808140:-1:exon

position:1808026:-1
position: 1808026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808140:-1
position: 1808140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1807590-1807674:-1:exon

position:1807590:-1
position: 1807590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1807674:-1
position: 1807674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1802738-1806651:-1:exon

position:1806651:-1
position: 1806651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

otud7a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: otud7a
product: OTU deubiquitinase 7A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178595.1
SIO_010081: otud7a
subclass of: SO_0000673
so part of: otud7a
location: complement(join(1802738..1806651,1807590..1807674,1808026..1808140,1826694..1826843,1828299..1828426,1839975..1840087,1844183..1844310,1845463..1845564,1855662..1855880,1867253..1867423,1876255..1876409,1940398..1940469,1940560..1940673))
location: region:1802738-1940673:-1
so has part: feature:1940560-1940673:-1:exon
so has part: feature:1940398-1940469:-1:exon
so has part: feature:1876255-1876409:-1:exon
so has part: feature:1867253-1867423:-1:exon
so has part: feature:1855662-1855880:-1:exon
so has part: feature:1845463-1845564:-1:exon
so has part: feature:1844183-1844310:-1:exon
so has part: feature:1839975-1840087:-1:exon
so has part: feature:1828299-1828426:-1:exon
so has part: feature:1826694-1826843:-1:exon
so has part: feature:1808026-1808140:-1:exon
so has part: feature:1807590-1807674:-1:exon
so has part: feature:1802738-1806651:-1:exon

position:1940673:-1
position: 1940673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1940560-1940673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1940398-1940469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1876255-1876409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1867253-1867423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1855662-1855880:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1845463-1845564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1844183-1844310:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1839975-1840087:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1828299-1828426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1826694-1826843:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1808026-1808140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1807590-1807674:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1802738-1806651:-1:exon

otud7a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: otud7a
product: OTU deubiquitinase 7A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178594.1
SIO_010081: otud7a
subclass of: SO_0000673
so part of: otud7a
location: complement(join(1802738..1806651,1807590..1807674,1808026..1808140,1826694..1826843,1828299..1828426,1839975..1840087,1844183..1844310,1845463..1845564,1855662..1855880,1867253..1867423,1876255..1876409,1883259..1883384,1883499..1883568,1940398..1940650))
location: region:1802738-1940650:-1
so has part: feature:1940398-1940650:-1:exon
so has part: feature:1883499-1883568:-1:exon
so has part: feature:1883259-1883384:-1:exon
so has part: feature:1876255-1876409:-1:exon
so has part: feature:1867253-1867423:-1:exon
so has part: feature:1855662-1855880:-1:exon
so has part: feature:1845463-1845564:-1:exon
so has part: feature:1844183-1844310:-1:exon
so has part: feature:1839975-1840087:-1:exon
so has part: feature:1828299-1828426:-1:exon
so has part: feature:1826694-1826843:-1:exon
so has part: feature:1808026-1808140:-1:exon
so has part: feature:1807590-1807674:-1:exon
so has part: feature:1802738-1806651:-1:exon

position:1940650:-1
position: 1940650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1940398-1940650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1883499-1883568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1883259-1883384:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1876255-1876409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1867253-1867423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1855662-1855880:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1845463-1845564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1844183-1844310:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1839975-1840087:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1828299-1828426:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1826694-1826843:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1808026-1808140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1807590-1807674:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1802738-1806651:-1:exon

otud7a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: otud7a
product: OTU deubiquitinase 7A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178591.1
SIO_010081: otud7a
subclass of: SO_0000673
so part of: otud7a
location: complement(join(1802738..1806651,1807590..1807674,1808026..1808140,1826694..1826843,1828299..1828426,1839975..1840087,1844183..1844310,1845463..1845564,1855662..1855880,1867253..1867423,1876255..1876409,1880054..1880191,1883259..1883384,1883499..1883568,1940398..1940650))
location: region:1802738-1940650:-1
so has part: feature:1940398-1940650:-1:exon
so has part: feature:1883499-1883568:-1:exon
so has part: feature:1883259-1883384:-1:exon
so has part: feature:1880054-1880191:-1:exon
so has part: feature:1876255-1876409:-1:exon
so has part: feature:1867253-1867423:-1:exon
so has part: feature:1855662-1855880:-1:exon
so has part: feature:1845463-1845564:-1:exon
so has part: feature:1844183-1844310:-1:exon
so has part: feature:1839975-1840087:-1:exon
so has part: feature:1828299-1828426:-1:exon
so has part: feature:1826694-1826843:-1:exon
so has part: feature:1808026-1808140:-1:exon
so has part: feature:1807590-1807674:-1:exon
so has part: feature:1802738-1806651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1940398-1940650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1883499-1883568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1883259-1883384:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1880054-1880191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1876255-1876409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1867253-1867423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1855662-1855880:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1845463-1845564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1844183-1844310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1839975-1840087:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1828299-1828426:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1826694-1826843:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1808026-1808140:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1807590-1807674:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1802738-1806651:-1:exon

otud7a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: otud7a
product: OTU deubiquitinase 7A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178596.1
SIO_010081: otud7a
subclass of: SO_0000673
so part of: otud7a
location: complement(join(1802738..1806651,1807590..1807674,1808026..1808140,1826694..1826843,1828299..1828426,1839975..1840087,1844183..1844310,1845463..1845564,1855662..1855880,1867253..1867423,1868522..1868566))
location: region:1802738-1868566:-1
so has part: feature:1868522-1868566:-1:exon
so has part: feature:1867253-1867423:-1:exon
so has part: feature:1855662-1855880:-1:exon
so has part: feature:1845463-1845564:-1:exon
so has part: feature:1844183-1844310:-1:exon
so has part: feature:1839975-1840087:-1:exon
so has part: feature:1828299-1828426:-1:exon
so has part: feature:1826694-1826843:-1:exon
so has part: feature:1808026-1808140:-1:exon
so has part: feature:1807590-1807674:-1:exon
so has part: feature:1802738-1806651:-1:exon

position:1868566:-1
position: 1868566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1868522-1868566:-1:exon

position:1868522:-1
position: 1868522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1867253-1867423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1855662-1855880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1845463-1845564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844183-1844310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1839975-1840087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828299-1828426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1826694-1826843:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1808026-1808140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1807590-1807674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1802738-1806651:-1:exon

otud7a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: otud7a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7A isoform X1
translation: MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLSAALNDFEQLRQVHTGNLPHVFNEGSFYKQQEKELSNQMNKSEQRQDEITQEKRLSRGISHASSAIVSLARSQVANECSSEQFPLEMPIYTFQLPDLNVYSEDFRSFIERDLIEQSTMVALEQAGRLNWWSVACSSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYTMMKNGTERDALKRRWRWQQTQQNKESGLVYTEEEWEREWNELLKLASSEPRTHYSKNTGTCGGVDNSEDPVYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSPLVLAYDQAHFSALVSMEQNDQQREQAAIPLTDSEHKLLPLHFAMDPKKDWEWGKDDNDNTKLANLILSLEAKLHLLHSYMNVSWICIPAETRAPLAQPESPTASVGEDVHSLSDSESDRDSVCSNSNLNGNKNQKEKDKGDKQKKDKEKNRTDSVANKLGSLSKTLGIKIKKNMGGLGGLVHGKISRGNSSNGRNGENVEKVKKKESNKSSKGSKEESSQSASSSPTDKSNISAKTLIEKQTDQWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMINYYLTTAQERFNAEQEQKRKETEKKASSNSTCKKVEQEPSQRSKIESNSQEDTLQGSPQSHTGQLGSKLEEKSDQTKETNSPRTSEIPKTGTLTSAHFTHTPALLRHVIHVAEVKSQPLSYQVDNQPPIISSLKTCATYPQHNRSLSYQSYCPVGLSGFPTVENMEPLKCLLPPEHKSHTYTNGFGTGDVSDYLEYADDDVSSVWQSGEKAKGRSMAAPPYSLQQNRCKQHNCPFYGRPETEFYCSYCYKEELKRRERGNKSI
SIO_010081: otud7a
subclass of: SO_0000673
so part of: otud7a
location: complement(join(1805275..1806651,1807590..1807674,1808026..1808140,1826694..1826843,1828299..1828426,1839975..1840087,1844183..1844310,1845463..1845564,1855662..1855880,1867253..1867423,1876255..1876339))
location: region:1805275-1876339:-1
so has part: feature:1876255-1876339:-1:exon
so has part: feature:1867253-1867423:-1:exon
so has part: feature:1855662-1855880:-1:exon
so has part: feature:1845463-1845564:-1:exon
so has part: feature:1844183-1844310:-1:exon
so has part: feature:1839975-1840087:-1:exon
so has part: feature:1828299-1828426:-1:exon
so has part: feature:1826694-1826843:-1:exon
so has part: feature:1808026-1808140:-1:exon
so has part: feature:1807590-1807674:-1:exon
so has part: feature:1805275-1806651:-1:exon

XP_041034525.1
type: Protein
SIO_000068: ncbiprotein

position:1805275:-1
position: 1805275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876339:-1
position: 1876339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1876255-1876339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1867253-1867423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1855662-1855880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1845463-1845564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844183-1844310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1839975-1840087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828299-1828426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1826694-1826843:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1808026-1808140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1807590-1807674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1805275-1806651:-1:exon

otud7a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: otud7a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7A isoform X1
translation: MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLSAALNDFEQLRQVHTGNLPHVFNEGSFYKQQEKELSNQMNKSEQRQDEITQEKRLSRGISHASSAIVSLARSQVANECSSEQFPLEMPIYTFQLPDLNVYSEDFRSFIERDLIEQSTMVALEQAGRLNWWSVACSSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYTMMKNGTERDALKRRWRWQQTQQNKESGLVYTEEEWEREWNELLKLASSEPRTHYSKNTGTCGGVDNSEDPVYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSPLVLAYDQAHFSALVSMEQNDQQREQAAIPLTDSEHKLLPLHFAMDPKKDWEWGKDDNDNTKLANLILSLEAKLHLLHSYMNVSWICIPAETRAPLAQPESPTASVGEDVHSLSDSESDRDSVCSNSNLNGNKNQKEKDKGDKQKKDKEKNRTDSVANKLGSLSKTLGIKIKKNMGGLGGLVHGKISRGNSSNGRNGENVEKVKKKESNKSSKGSKEESSQSASSSPTDKSNISAKTLIEKQTDQWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMINYYLTTAQERFNAEQEQKRKETEKKASSNSTCKKVEQEPSQRSKIESNSQEDTLQGSPQSHTGQLGSKLEEKSDQTKETNSPRTSEIPKTGTLTSAHFTHTPALLRHVIHVAEVKSQPLSYQVDNQPPIISSLKTCATYPQHNRSLSYQSYCPVGLSGFPTVENMEPLKCLLPPEHKSHTYTNGFGTGDVSDYLEYADDDVSSVWQSGEKAKGRSMAAPPYSLQQNRCKQHNCPFYGRPETEFYCSYCYKEELKRRERGNKSI
SIO_010081: otud7a
subclass of: SO_0000673
so part of: otud7a
location: complement(join(1805275..1806651,1807590..1807674,1808026..1808140,1826694..1826843,1828299..1828426,1839975..1840087,1844183..1844310,1845463..1845564,1855662..1855880,1867253..1867423,1876255..1876339))
location: region:1805275-1876339:-1
so has part: feature:1876255-1876339:-1:exon
so has part: feature:1867253-1867423:-1:exon
so has part: feature:1855662-1855880:-1:exon
so has part: feature:1845463-1845564:-1:exon
so has part: feature:1844183-1844310:-1:exon
so has part: feature:1839975-1840087:-1:exon
so has part: feature:1828299-1828426:-1:exon
so has part: feature:1826694-1826843:-1:exon
so has part: feature:1808026-1808140:-1:exon
so has part: feature:1807590-1807674:-1:exon
so has part: feature:1805275-1806651:-1:exon

XP_041034527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1876255-1876339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1867253-1867423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1855662-1855880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1845463-1845564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844183-1844310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1839975-1840087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828299-1828426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1826694-1826843:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1808026-1808140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1807590-1807674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1805275-1806651:-1:exon

otud7a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: otud7a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7A isoform X1
translation: MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLSAALNDFEQLRQVHTGNLPHVFNEGSFYKQQEKELSNQMNKSEQRQDEITQEKRLSRGISHASSAIVSLARSQVANECSSEQFPLEMPIYTFQLPDLNVYSEDFRSFIERDLIEQSTMVALEQAGRLNWWSVACSSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYTMMKNGTERDALKRRWRWQQTQQNKESGLVYTEEEWEREWNELLKLASSEPRTHYSKNTGTCGGVDNSEDPVYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSPLVLAYDQAHFSALVSMEQNDQQREQAAIPLTDSEHKLLPLHFAMDPKKDWEWGKDDNDNTKLANLILSLEAKLHLLHSYMNVSWICIPAETRAPLAQPESPTASVGEDVHSLSDSESDRDSVCSNSNLNGNKNQKEKDKGDKQKKDKEKNRTDSVANKLGSLSKTLGIKIKKNMGGLGGLVHGKISRGNSSNGRNGENVEKVKKKESNKSSKGSKEESSQSASSSPTDKSNISAKTLIEKQTDQWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMINYYLTTAQERFNAEQEQKRKETEKKASSNSTCKKVEQEPSQRSKIESNSQEDTLQGSPQSHTGQLGSKLEEKSDQTKETNSPRTSEIPKTGTLTSAHFTHTPALLRHVIHVAEVKSQPLSYQVDNQPPIISSLKTCATYPQHNRSLSYQSYCPVGLSGFPTVENMEPLKCLLPPEHKSHTYTNGFGTGDVSDYLEYADDDVSSVWQSGEKAKGRSMAAPPYSLQQNRCKQHNCPFYGRPETEFYCSYCYKEELKRRERGNKSI
SIO_010081: otud7a
subclass of: SO_0000673
so part of: otud7a
location: complement(join(1805275..1806651,1807590..1807674,1808026..1808140,1826694..1826843,1828299..1828426,1839975..1840087,1844183..1844310,1845463..1845564,1855662..1855880,1867253..1867423,1876255..1876339))
location: region:1805275-1876339:-1
so has part: feature:1876255-1876339:-1:exon
so has part: feature:1867253-1867423:-1:exon
so has part: feature:1855662-1855880:-1:exon
so has part: feature:1845463-1845564:-1:exon
so has part: feature:1844183-1844310:-1:exon
so has part: feature:1839975-1840087:-1:exon
so has part: feature:1828299-1828426:-1:exon
so has part: feature:1826694-1826843:-1:exon
so has part: feature:1808026-1808140:-1:exon
so has part: feature:1807590-1807674:-1:exon
so has part: feature:1805275-1806651:-1:exon

XP_041034528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1876255-1876339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1867253-1867423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1855662-1855880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1845463-1845564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844183-1844310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1839975-1840087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828299-1828426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1826694-1826843:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1808026-1808140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1807590-1807674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1805275-1806651:-1:exon

otud7a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: otud7a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7A isoform X1
translation: MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLSAALNDFEQLRQVHTGNLPHVFNEGSFYKQQEKELSNQMNKSEQRQDEITQEKRLSRGISHASSAIVSLARSQVANECSSEQFPLEMPIYTFQLPDLNVYSEDFRSFIERDLIEQSTMVALEQAGRLNWWSVACSSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYTMMKNGTERDALKRRWRWQQTQQNKESGLVYTEEEWEREWNELLKLASSEPRTHYSKNTGTCGGVDNSEDPVYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSPLVLAYDQAHFSALVSMEQNDQQREQAAIPLTDSEHKLLPLHFAMDPKKDWEWGKDDNDNTKLANLILSLEAKLHLLHSYMNVSWICIPAETRAPLAQPESPTASVGEDVHSLSDSESDRDSVCSNSNLNGNKNQKEKDKGDKQKKDKEKNRTDSVANKLGSLSKTLGIKIKKNMGGLGGLVHGKISRGNSSNGRNGENVEKVKKKESNKSSKGSKEESSQSASSSPTDKSNISAKTLIEKQTDQWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMINYYLTTAQERFNAEQEQKRKETEKKASSNSTCKKVEQEPSQRSKIESNSQEDTLQGSPQSHTGQLGSKLEEKSDQTKETNSPRTSEIPKTGTLTSAHFTHTPALLRHVIHVAEVKSQPLSYQVDNQPPIISSLKTCATYPQHNRSLSYQSYCPVGLSGFPTVENMEPLKCLLPPEHKSHTYTNGFGTGDVSDYLEYADDDVSSVWQSGEKAKGRSMAAPPYSLQQNRCKQHNCPFYGRPETEFYCSYCYKEELKRRERGNKSI
SIO_010081: otud7a
subclass of: SO_0000673
so part of: otud7a
location: complement(join(1805275..1806651,1807590..1807674,1808026..1808140,1826694..1826843,1828299..1828426,1839975..1840087,1844183..1844310,1845463..1845564,1855662..1855880,1867253..1867423,1876255..1876339))
location: region:1805275-1876339:-1
so has part: feature:1876255-1876339:-1:exon
so has part: feature:1867253-1867423:-1:exon
so has part: feature:1855662-1855880:-1:exon
so has part: feature:1845463-1845564:-1:exon
so has part: feature:1844183-1844310:-1:exon
so has part: feature:1839975-1840087:-1:exon
so has part: feature:1828299-1828426:-1:exon
so has part: feature:1826694-1826843:-1:exon
so has part: feature:1808026-1808140:-1:exon
so has part: feature:1807590-1807674:-1:exon
so has part: feature:1805275-1806651:-1:exon

XP_041034529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1876255-1876339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1867253-1867423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1855662-1855880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1845463-1845564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1844183-1844310:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1839975-1840087:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1828299-1828426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1826694-1826843:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1808026-1808140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1807590-1807674:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1805275-1806651:-1:exon

otud7a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: otud7a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 7A isoform X2
translation: MNKSEQRQDEITQEKRLSRGISHASSAIVSLARSQVANECSSEQFPLEMPIYTFQLPDLNVYSEDFRSFIERDLIEQSTMVALEQAGRLNWWSVACSSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYTMMKNGTERDALKRRWRWQQTQQNKESGLVYTEEEWEREWNELLKLASSEPRTHYSKNTGTCGGVDNSEDPVYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSPLVLAYDQAHFSALVSMEQNDQQREQAAIPLTDSEHKLLPLHFAMDPKKDWEWGKDDNDNTKLANLILSLEAKLHLLHSYMNVSWICIPAETRAPLAQPESPTASVGEDVHSLSDSESDRDSVCSNSNLNGNKNQKEKDKGDKQKKDKEKNRTDSVANKLGSLSKTLGIKIKKNMGGLGGLVHGKISRGNSSNGRNGENVEKVKKKESNKSSKGSKEESSQSASSSPTDKSNISAKTLIEKQTDQWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMINYYLTTAQERFNAEQEQKRKETEKKASSNSTCKKVEQEPSQRSKIESNSQEDTLQGSPQSHTGQLGSKLEEKSDQTKETNSPRTSEIPKTGTLTSAHFTHTPALLRHVIHVAEVKSQPLSYQVDNQPPIISSLKTCATYPQHNRSLSYQSYCPVGLSGFPTVENMEPLKCLLPPEHKSHTYTNGFGTGDVSDYLEYADDDVSSVWQSGEKAKGRSMAAPPYSLQQNRCKQHNCPFYGRPETEFYCSYCYKEELKRRERGNKSI
SIO_010081: otud7a
subclass of: SO_0000673
so part of: otud7a
location: complement(join(1805275..1806651,1807590..1807674,1808026..1808140,1826694..1826843,1828299..1828426,1839975..1840087,1844183..1844310,1845463..1845564,1855662..1855880,1867253..1867292))
location: region:1805275-1867292:-1
so has part: feature:1867253-1867292:-1:exon
so has part: feature:1855662-1855880:-1:exon
so has part: feature:1845463-1845564:-1:exon
so has part: feature:1844183-1844310:-1:exon
so has part: feature:1839975-1840087:-1:exon
so has part: feature:1828299-1828426:-1:exon
so has part: feature:1826694-1826843:-1:exon
so has part: feature:1808026-1808140:-1:exon
so has part: feature:1807590-1807674:-1:exon
so has part: feature:1805275-1806651:-1:exon

XP_041034530.1
type: Protein
SIO_000068: ncbiprotein

position:1867292:-1
position: 1867292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1867253-1867292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1855662-1855880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1845463-1845564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1844183-1844310:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1839975-1840087:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1828299-1828426:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1826694-1826843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1808026-1808140:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1807590-1807674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1805275-1806651:-1:exon

LOC121272163
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272163
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1936118..1936190
location: region:1936118-1936190:1
so has part: feature:1936118-1936190:1:exon

121272163
type: Gene
SIO_000068: ncbigene

position:1936118:1
position: 1936118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1936190:1
position: 1936190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1936118-1936190:1:exon

LOC121272163
type: Exon
subclass of: SO_0000147
RO_0002162: 13397
gene: LOC121272163
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC121272163
subclass of: SO_0000673
so part of: LOC121272163
location: 1936118..1936190
location: region:1936118-1936190:1
so has part: feature:1936118-1936190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1936118-1936190:1:exon

LOC121272076
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1982856..1989392
location: region:1982856-1989392:1
so has part: feature:1982856-1989392:1:exon
subclass of: SO_0000010

121272076
type: Gene
SIO_000068: ncbigene

position:1982856:1
position: 1982856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1989392:1
position: 1989392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1982856-1989392:1:exon

LOC121272076
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272076
product: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178509.1
SIO_010081: LOC121272076
subclass of: SO_0000673
so part of: LOC121272076
location: join(1982856..1983719,1988406..1989392)
location: region:1982856-1989392:1
so has part: feature:1982856-1983719:1:exon
so has part: feature:1988406-1989392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1982856-1983719:1:exon

position:1983719:1
position: 1983719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1988406-1989392:1:exon

position:1988406:1
position: 1988406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121272076
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like
translation: MNMRIVKYRFKCALATVTALTGLGFLFAGKFQSCEEDMPGIWENSEDGSNRRCSDLFYRILNLSAEQPICLRIIKGDQIAVQEALLNTLDVSGKQNPLTENHYLNMTKDCAAYIKDRKYLTFSLSREERNFPISYSIVIHDNIEMFERLLRTIYVPQNVYCIHVDRKAADSFHLAVRTIVACFHNVFVASKLENVIYASWSRVQADLNCMEDLLQSPVQWKYFINLCGLDFPIKTNAEIVRNLIVLNGKNSMESEVPSPSKKVRWLFHHEVKNQVSRTEEKKSLPPISTPMFTGNAYFVAAREFVNHLFASPEVQKFLKWAEDTYSPDEFVWATLQRMPTVPGSNPSNSKYQMSDMAAIARLVKWSYLEGDITKGAPYPKCTGAHRRSVCIYGSGDLHWILQQHHLFANKFHSEVDNTALQCLEEHLRYKAIYRKGLM
SIO_010081: LOC121272076
subclass of: SO_0000673
so part of: LOC121272076
location: join(1982934..1983719,1988406..1988936)
location: region:1982934-1988936:1
so has part: feature:1982934-1983719:1:exon
so has part: feature:1988406-1988936:1:exon

XP_041034443.1
type: Protein
SIO_000068: ncbiprotein

position:1982934:1
position: 1982934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1988936:1
position: 1988936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1982934-1983719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1988406-1988936:1:exon

trnah-gug
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: trnah-gug
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2020817..2020888
location: region:2020817-2020888:1
so has part: feature:2020817-2020888:1:exon
subclass of: SO_0000663

121272171
type: Gene
SIO_000068: ncbigene

position:2020817:1
position: 2020817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2020888:1
position: 2020888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2020817-2020888:1:exon

trnah-gug
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13397
gene: trnah-gug
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2020850..2020852,aa:His,seq:gtg)
SIO_010081: trnah-gug
subclass of: SO_0000673
so part of: trnah-gug
location: 2020817..2020888
location: region:2020817-2020888:1
so has part: feature:2020817-2020888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2020817-2020888:1:exon

LOC121272158
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272158
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2025317..2025533
location: region:2025317-2025533:1
so has part: feature:2025317-2025533:1:exon
subclass of: SO_0000578

121272158
type: Gene
SIO_000068: ncbigene

position:2025317:1
position: 2025317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025533:1
position: 2025533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2025317-2025533:1:exon

LOC121272158
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13397
nc RNA class: snoRNA
gene: LOC121272158
product: small nucleolar RNA U3
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00012
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005941853.1
SIO_010081: LOC121272158
subclass of: SO_0000673
so part of: LOC121272158
location: 2025317..2025533
location: region:2025317-2025533:1
so has part: feature:2025317-2025533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2025317-2025533:1:exon

adpgk
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: adpgk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2038432..2057994
location: region:2038432-2057994:1
so has part: feature:2038432-2057994:1:exon
subclass of: SO_0000010

121272044
type: Gene
SIO_000068: ncbigene

position:2038432:1
position: 2038432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2057994:1
position: 2057994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2038432-2057994:1:exon

adpgk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: adpgk
product: ADP-dependent glucokinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178434.1
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2038432..2038639,2039662..2039887,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053946..2057994)
location: region:2038432-2057994:1
so has part: feature:2038432-2038639:1:exon
so has part: feature:2039662-2039887:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053946-2057994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2038432-2038639:1:exon

position:2038639:1
position: 2038639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2039662-2039887:1:exon

position:2039662:1
position: 2039662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2039887:1
position: 2039887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2042007-2042069:1:exon

position:2042007:1
position: 2042007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042069:1
position: 2042069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2044769-2044889:1:exon

position:2044769:1
position: 2044769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044889:1
position: 2044889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2046856-2047052:1:exon

position:2046856:1
position: 2046856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2047052:1
position: 2047052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2048380-2048478:1:exon

position:2048380:1
position: 2048380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048478:1
position: 2048478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2053946-2057994:1:exon

position:2053946:1
position: 2053946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

adpgk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: adpgk
product: ADP-dependent glucokinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178435.1
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2038433..2038639,2039662..2039887,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053949..2057994)
location: region:2038433-2057994:1
so has part: feature:2038433-2038639:1:exon
so has part: feature:2039662-2039887:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053949-2057994:1:exon

position:2038433:1
position: 2038433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2038433-2038639:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2039662-2039887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2042007-2042069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044769-2044889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2046856-2047052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2053949-2057994:1:exon

position:2053949:1
position: 2053949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

adpgk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: adpgk
product: ADP-dependent glucokinase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178438.1
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2038544..2038644,2039662..2039887,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053946..2057994)
location: region:2038544-2057994:1
so has part: feature:2038544-2038644:1:exon
so has part: feature:2039662-2039887:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053946-2057994:1:exon

position:2038544:1
position: 2038544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2038544-2038644:1:exon

position:2038644:1
position: 2038644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2039662-2039887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2042007-2042069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044769-2044889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2046856-2047052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2053946-2057994:1:exon

adpgk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: adpgk
product: ADP-dependent glucokinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178436.1
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2038846..2039121,2039662..2039887,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053946..2057994)
location: region:2038846-2057994:1
so has part: feature:2038846-2039121:1:exon
so has part: feature:2039662-2039887:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053946-2057994:1:exon

position:2038846:1
position: 2038846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2038846-2039121:1:exon

position:2039121:1
position: 2039121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2039662-2039887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2042007-2042069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044769-2044889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2046856-2047052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2053946-2057994:1:exon

adpgk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: adpgk
product: ADP-dependent glucokinase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178437.1
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2038846..2039121,2039662..2039887,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053949..2057994)
location: region:2038846-2057994:1
so has part: feature:2038846-2039121:1:exon
so has part: feature:2039662-2039887:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053949-2057994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2038846-2039121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2039662-2039887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2042007-2042069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044769-2044889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2046856-2047052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2053949-2057994:1:exon

adpgk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: adpgk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-dependent glucokinase isoform X3
translation: MWRTTAAVALVAVVLHLLVSYYPIQAPADAVQFLSDYLFRLSVMRAPEEVVAEAWDSLIRAPGSSWTRVAVGVNACVDVVVCGIGLLEALALDPVNKVDHDTLQSREDLKETFSYFMEKGVAAERFFADKEVFQKIAQTASQFPGAKHFVGGNAALIGQKLSTNPNLSVLLCGPVGPKLHELLGDRIIIPPKSLQEVDEYHLILEYQAGDVLGEIKAPHANRFIFSHDMSNGEMNMMETFIASLEEFEPELIVLSGLHMMDGQGKEERNKRLQEVSVLISEIPNEVSVHLELASMTDTTYMNSIVEQQVLTIVNSIGLNEQELLFISQAGSGPHSSQGHWDGAPDIGMVSDIIFWLLKEYGRTDSRKDSDLTRVHFHTLAYHILATVDGYWNNQISSVAAGARVAGSQACGTDTIDPTKVVLNSPMEFVLSQTDKLLKNKKMTLSPTNPVRVWQRENISFFITPVLMCVNPVRTVGLGDTISAEGLLYSERK
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2038907..2039121,2039662..2039887,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053946..2054503)
location: region:2038907-2054503:1
so has part: feature:2038907-2039121:1:exon
so has part: feature:2039662-2039887:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053946-2054503:1:exon

XP_041034370.1
type: Protein
SIO_000068: ncbiprotein

position:2038907:1
position: 2038907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2054503:1
position: 2054503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2038907-2039121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2039662-2039887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2042007-2042069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044769-2044889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2046856-2047052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2053946-2054503:1:exon

adpgk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: adpgk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-dependent glucokinase isoform X4
translation: MWRTTAAVALVAVVLHLLVSYYPIQAPADAVQFLSDYLFRLSVMRAPEEVVAEAWDSLIRAPGSSWTRVAVGVNACVDVVVCGIGLLEALALDPVNKVDHDTLQSREDLKETFSYFMEKGVAAERFFADKEVFQKIAQTASQFPGAKHFVGGNAALIGQKLSTNPNLSVLLCGPVGPKLHELLGDRIIIPPKSLQEVDEYHLILEYQAGDVLGEIKAPHANRFIFSHDMSNGEMNMMETFIASLEEFEPELIVLSGLHMMDGQGKEERNKRLQEVSVLISEIPNEVSVHLELASMTDTTYMNSIVEQVLTIVNSIGLNEQELLFISQAGSGPHSSQGHWDGAPDIGMVSDIIFWLLKEYGRTDSRKDSDLTRVHFHTLAYHILATVDGYWNNQISSVAAGARVAGSQACGTDTIDPTKVVLNSPMEFVLSQTDKLLKNKKMTLSPTNPVRVWQRENISFFITPVLMCVNPVRTVGLGDTISAEGLLYSERK
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2038907..2039121,2039662..2039887,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053949..2054503)
location: region:2038907-2054503:1
so has part: feature:2038907-2039121:1:exon
so has part: feature:2039662-2039887:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053949-2054503:1:exon

XP_041034371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2038907-2039121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2039662-2039887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2042007-2042069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044769-2044889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2046856-2047052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2053949-2054503:1:exon

adpgk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: adpgk
product: ADP-dependent glucokinase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178439.1
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2038991..2039121,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053946..2057994)
location: region:2038991-2057994:1
so has part: feature:2038991-2039121:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053946-2057994:1:exon

position:2038991:1
position: 2038991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2038991-2039121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2042007-2042069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2044769-2044889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2046856-2047052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2053946-2057994:1:exon

adpgk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: adpgk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-dependent glucokinase isoform X1
translation: MEKGVAAERFFADKEVFQKIAQTASQFPGAKHFVGGNAALIGQKLSTNPNLSVLLCGPVGPKLHELLGDRIIIPPKSLQEVDEYHLILEYQAGDVLGEIKAPHANRFIFSHDMSNGEMNMMETFIASLEEFEPELIVLSGLHMMDGQGKEERNKRLQEVSVLISEIPNEVSVHLELASMTDTTYMNSIVEQQVLTIVNSIGLNEQELLFISQAGSGPHSSQGHWDGAPDIGMVSDIIFWLLKEYGRTDSRKDSDLTRVHFHTLAYHILATVDGYWNNQISSVAAGARVAGSQACGTDTIDPTKVVLNSPMEFVLSQTDKLLKNKKMTLSPTNPVRVWQRENISFFITPVLMCVNPVRTVGLGDTISAEGLLYSERK
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2039795..2039887,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053946..2054503)
location: region:2039795-2054503:1
so has part: feature:2039795-2039887:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053946-2054503:1:exon

XP_041034368.1
type: Protein
SIO_000068: ncbiprotein

position:2039795:1
position: 2039795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2039795-2039887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2042007-2042069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2044769-2044889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2046856-2047052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2053946-2054503:1:exon

adpgk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: adpgk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-dependent glucokinase isoform X1
translation: MEKGVAAERFFADKEVFQKIAQTASQFPGAKHFVGGNAALIGQKLSTNPNLSVLLCGPVGPKLHELLGDRIIIPPKSLQEVDEYHLILEYQAGDVLGEIKAPHANRFIFSHDMSNGEMNMMETFIASLEEFEPELIVLSGLHMMDGQGKEERNKRLQEVSVLISEIPNEVSVHLELASMTDTTYMNSIVEQQVLTIVNSIGLNEQELLFISQAGSGPHSSQGHWDGAPDIGMVSDIIFWLLKEYGRTDSRKDSDLTRVHFHTLAYHILATVDGYWNNQISSVAAGARVAGSQACGTDTIDPTKVVLNSPMEFVLSQTDKLLKNKKMTLSPTNPVRVWQRENISFFITPVLMCVNPVRTVGLGDTISAEGLLYSERK
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2039795..2039887,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053946..2054503)
location: region:2039795-2054503:1
so has part: feature:2039795-2039887:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053946-2054503:1:exon

XP_041034372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2039795-2039887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2042007-2042069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2044769-2044889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2046856-2047052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2053946-2054503:1:exon

adpgk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: adpgk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-dependent glucokinase isoform X2
translation: MEKGVAAERFFADKEVFQKIAQTASQFPGAKHFVGGNAALIGQKLSTNPNLSVLLCGPVGPKLHELLGDRIIIPPKSLQEVDEYHLILEYQAGDVLGEIKAPHANRFIFSHDMSNGEMNMMETFIASLEEFEPELIVLSGLHMMDGQGKEERNKRLQEVSVLISEIPNEVSVHLELASMTDTTYMNSIVEQVLTIVNSIGLNEQELLFISQAGSGPHSSQGHWDGAPDIGMVSDIIFWLLKEYGRTDSRKDSDLTRVHFHTLAYHILATVDGYWNNQISSVAAGARVAGSQACGTDTIDPTKVVLNSPMEFVLSQTDKLLKNKKMTLSPTNPVRVWQRENISFFITPVLMCVNPVRTVGLGDTISAEGLLYSERK
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2039795..2039887,2042007..2042069,2044769..2044889,2046856..2047052,2048380..2048478,2053949..2054503)
location: region:2039795-2054503:1
so has part: feature:2039795-2039887:1:exon
so has part: feature:2042007-2042069:1:exon
so has part: feature:2044769-2044889:1:exon
so has part: feature:2046856-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053949-2054503:1:exon

XP_041034369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2039795-2039887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2042007-2042069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2044769-2044889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2046856-2047052:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2053949-2054503:1:exon

adpgk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: adpgk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-dependent glucokinase isoform X5
translation: MSNGEMNMMETFIASLEEFEPELIVLSGLHMMDGQGKEERNKRLQEVSVLISEIPNEVSVHLELASMTDTTYMNSIVEQQVLTIVNSIGLNEQELLFISQAGSGPHSSQGHWDGAPDIGMVSDIIFWLLKEYGRTDSRKDSDLTRVHFHTLAYHILATVDGYWNNQISSVAAGARVAGSQACGTDTIDPTKVVLNSPMEFVLSQTDKLLKNKKMTLSPTNPVRVWQRENISFFITPVLMCVNPVRTVGLGDTISAEGLLYSERK
SIO_010081: adpgk
subclass of: SO_0000673
so part of: adpgk
location: join(2046915..2047052,2048380..2048478,2053946..2054503)
location: region:2046915-2054503:1
so has part: feature:2046915-2047052:1:exon
so has part: feature:2048380-2048478:1:exon
so has part: feature:2053946-2054503:1:exon

XP_041034373.1
type: Protein
SIO_000068: ncbiprotein

position:2046915:1
position: 2046915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2046915-2047052:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2048380-2048478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2053946-2054503:1:exon

LOC121271974
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121271974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2060897..2251567
location: region:2060897-2251567:1
so has part: feature:2060897-2251567:1:exon
subclass of: SO_0000010

121271974
type: Gene
SIO_000068: ncbigene

position:2060897:1
position: 2060897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2251567:1
position: 2251567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2060897-2251567:1:exon

LOC121271974
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121271974
product: neogenin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178235.1
SIO_010081: LOC121271974
subclass of: SO_0000673
so part of: LOC121271974
location: join(2060897..2061170,2121398..2121715,2160898..2161173,2161750..2161900,2181965..2182101,2190935..2191089,2192757..2192877,2203199..2203415,2207761..2207915,2214544..2214692,2217006..2217144,2217271..2217320,2217897..2218038,2219572..2219682,2220689..2220883,2222274..2222369,2223585..2223760,2224110..2224248,2225989..2226096,2227495..2227689,2240344..2240421,2240831..2240978,2243440..2243675,2244671..2244763,2246567..2246716,2248043..2248300,2248483..2248619,2249915..2251567)
location: region:2060897-2251567:1
so has part: feature:2060897-2061170:1:exon
so has part: feature:2121398-2121715:1:exon
so has part: feature:2160898-2161173:1:exon
so has part: feature:2161750-2161900:1:exon
so has part: feature:2181965-2182101:1:exon
so has part: feature:2190935-2191089:1:exon
so has part: feature:2192757-2192877:1:exon
so has part: feature:2203199-2203415:1:exon
so has part: feature:2207761-2207915:1:exon
so has part: feature:2214544-2214692:1:exon
so has part: feature:2217006-2217144:1:exon
so has part: feature:2217271-2217320:1:exon
so has part: feature:2217897-2218038:1:exon
so has part: feature:2219572-2219682:1:exon
so has part: feature:2220689-2220883:1:exon
so has part: feature:2222274-2222369:1:exon
so has part: feature:2223585-2223760:1:exon
so has part: feature:2224110-2224248:1:exon
so has part: feature:2225989-2226096:1:exon
so has part: feature:2227495-2227689:1:exon
so has part: feature:2240344-2240421:1:exon
so has part: feature:2240831-2240978:1:exon
so has part: feature:2243440-2243675:1:exon
so has part: feature:2244671-2244763:1:exon
so has part: feature:2246567-2246716:1:exon
so has part: feature:2248043-2248300:1:exon
so has part: feature:2248483-2248619:1:exon
so has part: feature:2249915-2251567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2060897-2061170:1:exon

position:2061170:1
position: 2061170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2121398-2121715:1:exon

position:2121398:1
position: 2121398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2121715:1
position: 2121715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2160898-2161173:1:exon

position:2160898:1
position: 2160898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161173:1
position: 2161173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2161750-2161900:1:exon

position:2161750:1
position: 2161750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161900:1
position: 2161900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2181965-2182101:1:exon

position:2181965:1
position: 2181965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2182101:1
position: 2182101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2190935-2191089:1:exon

position:2190935:1
position: 2190935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2191089:1
position: 2191089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2192757-2192877:1:exon

position:2192757:1
position: 2192757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2192877:1
position: 2192877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2203199-2203415:1:exon

position:2203199:1
position: 2203199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2203415:1
position: 2203415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2207761-2207915:1:exon

position:2207761:1
position: 2207761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2207915:1
position: 2207915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2214544-2214692:1:exon

position:2214544:1
position: 2214544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214692:1
position: 2214692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2217006-2217144:1:exon

position:2217006:1
position: 2217006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2217144:1
position: 2217144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2217271-2217320:1:exon

position:2217271:1
position: 2217271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2217320:1
position: 2217320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2217897-2218038:1:exon

position:2217897:1
position: 2217897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2218038:1
position: 2218038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2219572-2219682:1:exon

position:2219572:1
position: 2219572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2219682:1
position: 2219682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2220689-2220883:1:exon

position:2220689:1
position: 2220689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2220883:1
position: 2220883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2222274-2222369:1:exon

position:2222274:1
position: 2222274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2222369:1
position: 2222369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2223585-2223760:1:exon

position:2223585:1
position: 2223585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2223760:1
position: 2223760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2224110-2224248:1:exon

position:2224110:1
position: 2224110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2224248:1
position: 2224248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2225989-2226096:1:exon

position:2225989:1
position: 2225989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2226096:1
position: 2226096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2227495-2227689:1:exon

position:2227495:1
position: 2227495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2227689:1
position: 2227689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2240344-2240421:1:exon

position:2240344:1
position: 2240344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2240421:1
position: 2240421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2240831-2240978:1:exon

position:2240831:1
position: 2240831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2240978:1
position: 2240978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2243440-2243675:1:exon

position:2243440:1
position: 2243440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2243675:1
position: 2243675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2244671-2244763:1:exon

position:2244671:1
position: 2244671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2244763:1
position: 2244763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2246567-2246716:1:exon

position:2246567:1
position: 2246567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2246716:1
position: 2246716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2248043-2248300:1:exon

position:2248043:1
position: 2248043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2248300:1
position: 2248300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2248483-2248619:1:exon

position:2248483:1
position: 2248483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2248619:1
position: 2248619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2249915-2251567:1:exon

position:2249915:1
position: 2249915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121271974
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121271974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neogenin-like
translation: MAEPRLRFMLFLAALSTATGAESVIRTFTPFYFTVEPADTLAIRGSSVILNCSVFAEPSAKIEWRKDGTFLNLVSDERRQMLPEGSLLIRSVVHSKHHKPDEGFYQCVATIDSLGTIVSRTAKMTVAGLPRFSGQPQAVSVHQGDTTLLGCEVNGDLVPLVRWEHNRQLVELEGRFLKLPSGTLEISNVSDSDAGLYRCSVETAGLSKTSEETELTVLPEISAERKMKFLQQPVPISKVAGQAVILPCVASGYPTPTIHWTRNSETILERFQKFTLVGSGSLQISDVTEDDAGIYECIAESGNETAHAQTELSVQVPPLFLKRPVNIYAHESMDIVFECEVTGTPMPTVKWIKNGDMVIPSDYFKIVNERNLQVLGLVKSDEGLYQCVAENDVGNERASAQLIILEHDVPIPTFPPPSLTSATADHLAAATAGLLPSAPRDVMALLVSTRFIKLTWRPPAEPNAEILTYSVYYSRDGTNRERVENTSRPGDLEVTIGELMPDVKYVFRVVAHNKHGAGESSAPFKVATQPEVQVPGPAQNLVAQANSPTSITVTWQEPHSDNGPIANYKLYYMEKGAGSEQDVDVGSLSYTMNGLKKFTEYSFRVVAYNKHGPGVSTEEVVATTYSGVPSAPPQNVTLEVRNSKSIVVHWQPPPPGTHNGVIIGYNIRYKKGGRRGETDTTGGSQLSQIIDGLERNTEYSFRVSAITVNGTGPSSDWVSAETFESDLDESRVPDKPSSLHVRPLINNIVVSWTPPENQNIVVRGYAIGYGIGSPHAETIRVDYKQRYYTIENLEPNSHYVITLKAYNKIGEGIPLYESTATRPLTVPDPSPMLPPVGVQATVLTHDTIRVTWADSSLPKNQKITDARFYTVRWKTNYPANTKYKTADTTTLSYIVSGLKPNTLYEFSVKVTKGRRSSTWSMTAHGTTFETVPTSPPKDLTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDINAEIHDWVIEPVVGDRLTHQIQDLTLDTTYYFKIQARNSKGMGPLSEFVQFRTPKAPGSSGKLGKNPSVMDSGSDTRHSISGHNSPHGSPTSSLDSNTMLIIIISAGVFTIIIVVIIALICTRRTNYQQKKKRAACKSANGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPVMTDTPIPRNSQDITPVENSLDKDHQRRNSYLGRELEDGMSTLSGRRGLRPKMMMPFDAQPPQPVISAHPIHSLDNPHHHHLCDGPSSPTRSYLRHQISSRPLGSSVDRANSTESVRNTPNSDMSPAPSSQAHPVENVEADVPAVSYLPGSQEEESNRSVPTAHVRPSHPLKSFAVIAIASASTNYETASSSTPLLSQTGTNPQVHSVKTASIGTLGRSRSPMAVTVPSAPDVAESTKMLEDSDSNYGPDELTEEMTHLTGLMKDLNVITTA
SIO_010081: LOC121271974
subclass of: SO_0000673
so part of: LOC121271974
location: join(2061107..2061170,2121398..2121715,2160898..2161173,2161750..2161900,2181965..2182101,2190935..2191089,2192757..2192877,2203199..2203415,2207761..2207915,2214544..2214692,2217006..2217144,2217271..2217320,2217897..2218038,2219572..2219682,2220689..2220883,2222274..2222369,2223585..2223760,2224110..2224248,2225989..2226096,2227495..2227689,2240344..2240421,2240831..2240978,2243440..2243675,2244671..2244763,2246567..2246716,2248043..2248300,2248483..2248619,2249915..2249998)
location: region:2061107-2249998:1
so has part: feature:2061107-2061170:1:exon
so has part: feature:2121398-2121715:1:exon
so has part: feature:2160898-2161173:1:exon
so has part: feature:2161750-2161900:1:exon
so has part: feature:2181965-2182101:1:exon
so has part: feature:2190935-2191089:1:exon
so has part: feature:2192757-2192877:1:exon
so has part: feature:2203199-2203415:1:exon
so has part: feature:2207761-2207915:1:exon
so has part: feature:2214544-2214692:1:exon
so has part: feature:2217006-2217144:1:exon
so has part: feature:2217271-2217320:1:exon
so has part: feature:2217897-2218038:1:exon
so has part: feature:2219572-2219682:1:exon
so has part: feature:2220689-2220883:1:exon
so has part: feature:2222274-2222369:1:exon
so has part: feature:2223585-2223760:1:exon
so has part: feature:2224110-2224248:1:exon
so has part: feature:2225989-2226096:1:exon
so has part: feature:2227495-2227689:1:exon
so has part: feature:2240344-2240421:1:exon
so has part: feature:2240831-2240978:1:exon
so has part: feature:2243440-2243675:1:exon
so has part: feature:2244671-2244763:1:exon
so has part: feature:2246567-2246716:1:exon
so has part: feature:2248043-2248300:1:exon
so has part: feature:2248483-2248619:1:exon
so has part: feature:2249915-2249998:1:exon

XP_041034169.1
type: Protein
SIO_000068: ncbiprotein

position:2061107:1
position: 2061107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2249998:1
position: 2249998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2061107-2061170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2121398-2121715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2160898-2161173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2161750-2161900:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2181965-2182101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2190935-2191089:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2192757-2192877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2203199-2203415:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2207761-2207915:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2214544-2214692:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2217006-2217144:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2217271-2217320:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2217897-2218038:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2219572-2219682:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2220689-2220883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2222274-2222369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2223585-2223760:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2224110-2224248:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2225989-2226096:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2227495-2227689:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2240344-2240421:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2240831-2240978:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2243440-2243675:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2244671-2244763:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2246567-2246716:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2248043-2248300:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2248483-2248619:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2249915-2249998:1:exon

bbs4
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2251571..2307465)
location: region:2251571-2307465:-1
so has part: feature:2251571-2307465:-1:exon
subclass of: SO_0000010

121271975
type: Gene
SIO_000068: ncbigene

position:2251571:-1
position: 2251571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2307465:-1
position: 2307465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2251571-2307465:-1:exon

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178238.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(2251571..2254390,2255958..2256168,2258467..2258611,2260136..2260205,2262184..2262355,2266956..2267108,2267912..2267980,2273350..2273404,2273867..2273994,2277876..2277929,2278160..2278232,2278679..2278790,2279520..2279583,2280400..2280479,2282484..2282526,2307411..2307465))
location: region:2251571-2307465:-1
so has part: feature:2307411-2307465:-1:exon
so has part: feature:2282484-2282526:-1:exon
so has part: feature:2280400-2280479:-1:exon
so has part: feature:2279520-2279583:-1:exon
so has part: feature:2278679-2278790:-1:exon
so has part: feature:2278160-2278232:-1:exon
so has part: feature:2277876-2277929:-1:exon
so has part: feature:2273867-2273994:-1:exon
so has part: feature:2273350-2273404:-1:exon
so has part: feature:2267912-2267980:-1:exon
so has part: feature:2266956-2267108:-1:exon
so has part: feature:2262184-2262355:-1:exon
so has part: feature:2260136-2260205:-1:exon
so has part: feature:2258467-2258611:-1:exon
so has part: feature:2255958-2256168:-1:exon
so has part: feature:2251571-2254390:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2307411-2307465:-1:exon

position:2307411:-1
position: 2307411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2282484-2282526:-1:exon

position:2282484:-1
position: 2282484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2282526:-1
position: 2282526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2280400-2280479:-1:exon

position:2280400:-1
position: 2280400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2280479:-1
position: 2280479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2279520-2279583:-1:exon

position:2279520:-1
position: 2279520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2279583:-1
position: 2279583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2278679-2278790:-1:exon

position:2278679:-1
position: 2278679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2278790:-1
position: 2278790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2278160-2278232:-1:exon

position:2278160:-1
position: 2278160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2278232:-1
position: 2278232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2277876-2277929:-1:exon

position:2277876:-1
position: 2277876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2277929:-1
position: 2277929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2273867-2273994:-1:exon

position:2273867:-1
position: 2273867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2273994:-1
position: 2273994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2273350-2273404:-1:exon

position:2273350:-1
position: 2273350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2273404:-1
position: 2273404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2267912-2267980:-1:exon

position:2267912:-1
position: 2267912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2267980:-1
position: 2267980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2266956-2267108:-1:exon

position:2266956:-1
position: 2266956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2267108:-1
position: 2267108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2262184-2262355:-1:exon

position:2262184:-1
position: 2262184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2262355:-1
position: 2262355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2260136-2260205:-1:exon

position:2260136:-1
position: 2260136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2260205:-1
position: 2260205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2258467-2258611:-1:exon

position:2258467:-1
position: 2258467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2258611:-1
position: 2258611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2255958-2256168:-1:exon

position:2255958:-1
position: 2255958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2256168:-1
position: 2256168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2251571-2254390:-1:exon

position:2254390:-1
position: 2254390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178236.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(2251571..2254390,2255958..2256168,2258467..2258611,2260136..2260205,2262184..2262355,2266956..2267108,2267912..2267980,2273350..2273404,2273867..2273994,2277876..2277929,2278160..2278232,2278679..2278790,2279520..2279583,2280400..2280479,2282484..2282526,2304551..2304634,2307411..2307453))
location: region:2251571-2307453:-1
so has part: feature:2307411-2307453:-1:exon
so has part: feature:2304551-2304634:-1:exon
so has part: feature:2282484-2282526:-1:exon
so has part: feature:2280400-2280479:-1:exon
so has part: feature:2279520-2279583:-1:exon
so has part: feature:2278679-2278790:-1:exon
so has part: feature:2278160-2278232:-1:exon
so has part: feature:2277876-2277929:-1:exon
so has part: feature:2273867-2273994:-1:exon
so has part: feature:2273350-2273404:-1:exon
so has part: feature:2267912-2267980:-1:exon
so has part: feature:2266956-2267108:-1:exon
so has part: feature:2262184-2262355:-1:exon
so has part: feature:2260136-2260205:-1:exon
so has part: feature:2258467-2258611:-1:exon
so has part: feature:2255958-2256168:-1:exon
so has part: feature:2251571-2254390:-1:exon

position:2307453:-1
position: 2307453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2307411-2307453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2304551-2304634:-1:exon

position:2304551:-1
position: 2304551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2304634:-1
position: 2304634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2282484-2282526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2280400-2280479:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2279520-2279583:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2278679-2278790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2278160-2278232:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2277876-2277929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2273867-2273994:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2273350-2273404:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2267912-2267980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2266956-2267108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2262184-2262355:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2260136-2260205:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2258467-2258611:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2255958-2256168:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2251571-2254390:-1:exon

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178237.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(2251571..2254390,2255958..2256168,2258467..2258611,2260136..2260205,2262184..2262355,2266956..2267108,2267912..2267980,2273350..2273404,2273867..2273994,2277876..2277929,2278160..2278232,2278679..2278790,2279520..2279583,2280400..2280479,2282484..2282526,2304551..2304651))
location: region:2251571-2304651:-1
so has part: feature:2304551-2304651:-1:exon
so has part: feature:2282484-2282526:-1:exon
so has part: feature:2280400-2280479:-1:exon
so has part: feature:2279520-2279583:-1:exon
so has part: feature:2278679-2278790:-1:exon
so has part: feature:2278160-2278232:-1:exon
so has part: feature:2277876-2277929:-1:exon
so has part: feature:2273867-2273994:-1:exon
so has part: feature:2273350-2273404:-1:exon
so has part: feature:2267912-2267980:-1:exon
so has part: feature:2266956-2267108:-1:exon
so has part: feature:2262184-2262355:-1:exon
so has part: feature:2260136-2260205:-1:exon
so has part: feature:2258467-2258611:-1:exon
so has part: feature:2255958-2256168:-1:exon
so has part: feature:2251571-2254390:-1:exon

position:2304651:-1
position: 2304651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2304551-2304651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2282484-2282526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2280400-2280479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2279520-2279583:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2278679-2278790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2278160-2278232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2277876-2277929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2273867-2273994:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2273350-2273404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2267912-2267980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2266956-2267108:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2262184-2262355:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2260136-2260205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2258467-2258611:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2255958-2256168:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2251571-2254390:-1:exon

bbs4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: bbs4
product: Bardet-Biedl syndrome 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178240.1
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(2251571..2254390,2255958..2256168,2258467..2258611,2260136..2260205,2262184..2262355,2266956..2267108,2267912..2267980,2273350..2273404,2273867..2273994,2275637..2275787))
location: region:2251571-2275787:-1
so has part: feature:2275637-2275787:-1:exon
so has part: feature:2273867-2273994:-1:exon
so has part: feature:2273350-2273404:-1:exon
so has part: feature:2267912-2267980:-1:exon
so has part: feature:2266956-2267108:-1:exon
so has part: feature:2262184-2262355:-1:exon
so has part: feature:2260136-2260205:-1:exon
so has part: feature:2258467-2258611:-1:exon
so has part: feature:2255958-2256168:-1:exon
so has part: feature:2251571-2254390:-1:exon

position:2275787:-1
position: 2275787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2275637-2275787:-1:exon

position:2275637:-1
position: 2275637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2273867-2273994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2273350-2273404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2267912-2267980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2266956-2267108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2262184-2262355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2260136-2260205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2258467-2258611:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2255958-2256168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2251571-2254390:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X2
translation: MAAERIIQRSDVRKSQLRKVPELPILERRNWLIHLHYIRKDYETCKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQSCAILNPQNVDNLKQVARSLFLLGKHKAAIEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEHLNYALQTSRHDLTFMVLGKLHLLEGTTQNAIETYKKAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYEQAVSLEQLNPLVNLNYSILLYNQGDKKGALHQYQEMEKKVNKLKASSNVLEFDPELVDMAQKIGAALQVGENLVWTKPAKDSKLRERPAPSSKSTTNQQPLGSNKALGQAMSSAAGYSKTMQLPTGGYPTRVQKPPSLPLEPESSTDSAART
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(2254308..2254390,2255958..2256168,2258467..2258611,2260136..2260205,2262184..2262355,2266956..2267108,2267912..2267980,2273350..2273404,2273867..2273994,2277876..2277929,2278160..2278232,2278679..2278790,2279520..2279583,2280400..2280479,2282484..2282526,2307411..2307425))
location: region:2254308-2307425:-1
so has part: feature:2307411-2307425:-1:exon
so has part: feature:2282484-2282526:-1:exon
so has part: feature:2280400-2280479:-1:exon
so has part: feature:2279520-2279583:-1:exon
so has part: feature:2278679-2278790:-1:exon
so has part: feature:2278160-2278232:-1:exon
so has part: feature:2277876-2277929:-1:exon
so has part: feature:2273867-2273994:-1:exon
so has part: feature:2273350-2273404:-1:exon
so has part: feature:2267912-2267980:-1:exon
so has part: feature:2266956-2267108:-1:exon
so has part: feature:2262184-2262355:-1:exon
so has part: feature:2260136-2260205:-1:exon
so has part: feature:2258467-2258611:-1:exon
so has part: feature:2255958-2256168:-1:exon
so has part: feature:2254308-2254390:-1:exon

XP_041034172.1
type: Protein
SIO_000068: ncbiprotein

position:2254308:-1
position: 2254308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2307425:-1
position: 2307425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2307411-2307425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2282484-2282526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2280400-2280479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2279520-2279583:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2278679-2278790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2278160-2278232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2277876-2277929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2273867-2273994:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2273350-2273404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2267912-2267980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2266956-2267108:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2262184-2262355:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2260136-2260205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2258467-2258611:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2255958-2256168:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2254308-2254390:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X1
translation: MADSGKELIIQRSDVRKSQLRKVPELPILERRNWLIHLHYIRKDYETCKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQSCAILNPQNVDNLKQVARSLFLLGKHKAAIEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEHLNYALQTSRHDLTFMVLGKLHLLEGTTQNAIETYKKAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYEQAVSLEQLNPLVNLNYSILLYNQGDKKGALHQYQEMEKKVNKLKASSNVLEFDPELVDMAQKIGAALQVGENLVWTKPAKDSKLRERPAPSSKSTTNQQPLGSNKALGQAMSSAAGYSKTMQLPTGGYPTRVQKPPSLPLEPESSTDSAART
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(2254308..2254390,2255958..2256168,2258467..2258611,2260136..2260205,2262184..2262355,2266956..2267108,2267912..2267980,2273350..2273404,2273867..2273994,2277876..2277929,2278160..2278232,2278679..2278790,2279520..2279583,2280400..2280479,2282484..2282526,2304551..2304574))
location: region:2254308-2304574:-1
so has part: feature:2304551-2304574:-1:exon
so has part: feature:2282484-2282526:-1:exon
so has part: feature:2280400-2280479:-1:exon
so has part: feature:2279520-2279583:-1:exon
so has part: feature:2278679-2278790:-1:exon
so has part: feature:2278160-2278232:-1:exon
so has part: feature:2277876-2277929:-1:exon
so has part: feature:2273867-2273994:-1:exon
so has part: feature:2273350-2273404:-1:exon
so has part: feature:2267912-2267980:-1:exon
so has part: feature:2266956-2267108:-1:exon
so has part: feature:2262184-2262355:-1:exon
so has part: feature:2260136-2260205:-1:exon
so has part: feature:2258467-2258611:-1:exon
so has part: feature:2255958-2256168:-1:exon
so has part: feature:2254308-2254390:-1:exon

XP_041034170.1
type: Protein
SIO_000068: ncbiprotein

position:2304574:-1
position: 2304574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2304551-2304574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2282484-2282526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2280400-2280479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2279520-2279583:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2278679-2278790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2278160-2278232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2277876-2277929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2273867-2273994:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2273350-2273404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2267912-2267980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2266956-2267108:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2262184-2262355:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2260136-2260205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2258467-2258611:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2255958-2256168:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2254308-2254390:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X1
translation: MADSGKELIIQRSDVRKSQLRKVPELPILERRNWLIHLHYIRKDYETCKAIIKEQLQETQGMCEYAVYVQALIFRLEGKIQESLELFQSCAILNPQNVDNLKQVARSLFLLGKHKAAIEVYSEAAKLNEKDWEISHNLGVCFMHLKNFEKAKEHLNYALQTSRHDLTFMVLGKLHLLEGTTQNAIETYKKAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYEQAVSLEQLNPLVNLNYSILLYNQGDKKGALHQYQEMEKKVNKLKASSNVLEFDPELVDMAQKIGAALQVGENLVWTKPAKDSKLRERPAPSSKSTTNQQPLGSNKALGQAMSSAAGYSKTMQLPTGGYPTRVQKPPSLPLEPESSTDSAART
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(2254308..2254390,2255958..2256168,2258467..2258611,2260136..2260205,2262184..2262355,2266956..2267108,2267912..2267980,2273350..2273404,2273867..2273994,2277876..2277929,2278160..2278232,2278679..2278790,2279520..2279583,2280400..2280479,2282484..2282526,2304551..2304574))
location: region:2254308-2304574:-1
so has part: feature:2304551-2304574:-1:exon
so has part: feature:2282484-2282526:-1:exon
so has part: feature:2280400-2280479:-1:exon
so has part: feature:2279520-2279583:-1:exon
so has part: feature:2278679-2278790:-1:exon
so has part: feature:2278160-2278232:-1:exon
so has part: feature:2277876-2277929:-1:exon
so has part: feature:2273867-2273994:-1:exon
so has part: feature:2273350-2273404:-1:exon
so has part: feature:2267912-2267980:-1:exon
so has part: feature:2266956-2267108:-1:exon
so has part: feature:2262184-2262355:-1:exon
so has part: feature:2260136-2260205:-1:exon
so has part: feature:2258467-2258611:-1:exon
so has part: feature:2255958-2256168:-1:exon
so has part: feature:2254308-2254390:-1:exon

XP_041034171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2304551-2304574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2282484-2282526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2280400-2280479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2279520-2279583:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2278679-2278790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2278160-2278232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2277876-2277929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2273867-2273994:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2273350-2273404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2267912-2267980:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2266956-2267108:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2262184-2262355:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2260136-2260205:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2258467-2258611:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2255958-2256168:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2254308-2254390:-1:exon

bbs4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: bbs4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 4 protein isoform X3
translation: MSDLILTWAKEHLNYALQTSRHDLTFMVLGKLHLLEGTTQNAIETYKKAVEFSPENAELLTTLGLLYLQLGMYQKAFEHLGNALTYNPNNYKAILAAGSMMQTHSDFDVALSKYRIAAHAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINIQPRMGELYMLLAVTLTNLADPDNAKRAYEQAVSLEQLNPLVNLNYSILLYNQGDKKGALHQYQEMEKKVNKLKASSNVLEFDPELVDMAQKIGAALQVGENLVWTKPAKDSKLRERPAPSSKSTTNQQPLGSNKALGQAMSSAAGYSKTMQLPTGGYPTRVQKPPSLPLEPESSTDSAART
SIO_010081: bbs4
subclass of: SO_0000673
so part of: bbs4
location: complement(join(2254308..2254390,2255958..2256168,2258467..2258611,2260136..2260205,2262184..2262355,2266956..2267108,2267912..2267980,2273350..2273404,2273867..2273994,2275637..2275660))
location: region:2254308-2275660:-1
so has part: feature:2275637-2275660:-1:exon
so has part: feature:2273867-2273994:-1:exon
so has part: feature:2273350-2273404:-1:exon
so has part: feature:2267912-2267980:-1:exon
so has part: feature:2266956-2267108:-1:exon
so has part: feature:2262184-2262355:-1:exon
so has part: feature:2260136-2260205:-1:exon
so has part: feature:2258467-2258611:-1:exon
so has part: feature:2255958-2256168:-1:exon
so has part: feature:2254308-2254390:-1:exon

XP_041034174.1
type: Protein
SIO_000068: ncbiprotein

position:2275660:-1
position: 2275660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2275637-2275660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2273867-2273994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2273350-2273404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2267912-2267980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2266956-2267108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2262184-2262355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2260136-2260205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2258467-2258611:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2255958-2256168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2254308-2254390:-1:exon

LOC121271986
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121271986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2311206..2364629)
location: region:2311206-2364629:-1
so has part: feature:2311206-2364629:-1:exon
subclass of: SO_0000010

121271986
type: Gene
SIO_000068: ncbigene

position:2311206:-1
position: 2311206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2364629:-1
position: 2364629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2311206-2364629:-1:exon

LOC121271986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121271986
product: E3 ubiquitin-protein ligase ARIH1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178263.1
SIO_010081: LOC121271986
subclass of: SO_0000673
so part of: LOC121271986
location: complement(join(2311206..2312751,2314712..2314824,2318312..2318572,2320285..2320342,2320899..2321029,2324317..2324388,2325735..2325777,2325895..2326001,2326390..2326456,2331291..2331346,2331448..2331540,2344668..2344730,2347819..2347963,2352711..2352778,2364209..2364629))
location: region:2311206-2364629:-1
so has part: feature:2364209-2364629:-1:exon
so has part: feature:2352711-2352778:-1:exon
so has part: feature:2347819-2347963:-1:exon
so has part: feature:2344668-2344730:-1:exon
so has part: feature:2331448-2331540:-1:exon
so has part: feature:2331291-2331346:-1:exon
so has part: feature:2326390-2326456:-1:exon
so has part: feature:2325895-2326001:-1:exon
so has part: feature:2325735-2325777:-1:exon
so has part: feature:2324317-2324388:-1:exon
so has part: feature:2320899-2321029:-1:exon
so has part: feature:2320285-2320342:-1:exon
so has part: feature:2318312-2318572:-1:exon
so has part: feature:2314712-2314824:-1:exon
so has part: feature:2311206-2312751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2364209-2364629:-1:exon

position:2364209:-1
position: 2364209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2352711-2352778:-1:exon

position:2352711:-1
position: 2352711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352778:-1
position: 2352778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2347819-2347963:-1:exon

position:2347819:-1
position: 2347819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2347963:-1
position: 2347963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2344668-2344730:-1:exon

position:2344668:-1
position: 2344668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2344730:-1
position: 2344730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2331448-2331540:-1:exon

position:2331448:-1
position: 2331448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2331540:-1
position: 2331540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2331291-2331346:-1:exon

position:2331291:-1
position: 2331291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2331346:-1
position: 2331346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2326390-2326456:-1:exon

position:2326390:-1
position: 2326390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326456:-1
position: 2326456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2325895-2326001:-1:exon

position:2325895:-1
position: 2325895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326001:-1
position: 2326001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2325735-2325777:-1:exon

position:2325735:-1
position: 2325735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2325777:-1
position: 2325777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2324317-2324388:-1:exon

position:2324317:-1
position: 2324317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2324388:-1
position: 2324388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2320899-2321029:-1:exon

position:2320899:-1
position: 2320899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2321029:-1
position: 2321029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2320285-2320342:-1:exon

position:2320285:-1
position: 2320285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2320342:-1
position: 2320342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2318312-2318572:-1:exon

position:2318312:-1
position: 2318312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2318572:-1
position: 2318572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2314712-2314824:-1:exon

position:2314712:-1
position: 2314712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2314824:-1
position: 2314824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2311206-2312751:-1:exon

position:2312751:-1
position: 2312751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121271986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121271986
product: E3 ubiquitin-protein ligase ARIH1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178264.1
SIO_010081: LOC121271986
subclass of: SO_0000673
so part of: LOC121271986
location: complement(join(2311206..2312751,2314712..2314824,2318312..2318572,2320285..2320342,2320899..2321029,2324317..2324388,2325735..2325777,2325895..2326001,2326390..2326456,2331291..2331346,2331448..2331540,2347819..2347963,2352711..2352778,2364209..2364628))
location: region:2311206-2364628:-1
so has part: feature:2364209-2364628:-1:exon
so has part: feature:2352711-2352778:-1:exon
so has part: feature:2347819-2347963:-1:exon
so has part: feature:2331448-2331540:-1:exon
so has part: feature:2331291-2331346:-1:exon
so has part: feature:2326390-2326456:-1:exon
so has part: feature:2325895-2326001:-1:exon
so has part: feature:2325735-2325777:-1:exon
so has part: feature:2324317-2324388:-1:exon
so has part: feature:2320899-2321029:-1:exon
so has part: feature:2320285-2320342:-1:exon
so has part: feature:2318312-2318572:-1:exon
so has part: feature:2314712-2314824:-1:exon
so has part: feature:2311206-2312751:-1:exon

position:2364628:-1
position: 2364628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2364209-2364628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2352711-2352778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347819-2347963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2331448-2331540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2331291-2331346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2326390-2326456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2325895-2326001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2325735-2325777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2324317-2324388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2320899-2321029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2320285-2320342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2318312-2318572:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2314712-2314824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2311206-2312751:-1:exon

LOC121271986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121271986
product: E3 ubiquitin-protein ligase ARIH1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178265.1
SIO_010081: LOC121271986
subclass of: SO_0000673
so part of: LOC121271986
location: complement(join(2311206..2312751,2314712..2314824,2318312..2318572,2320285..2320342,2320899..2321029,2324317..2324388,2325735..2325777,2325895..2326001,2326390..2326456,2331291..2331346,2331448..2331540,2344668..2344730,2347819..2347963,2352711..2352778,2359229..2359776))
location: region:2311206-2359776:-1
so has part: feature:2359229-2359776:-1:exon
so has part: feature:2352711-2352778:-1:exon
so has part: feature:2347819-2347963:-1:exon
so has part: feature:2344668-2344730:-1:exon
so has part: feature:2331448-2331540:-1:exon
so has part: feature:2331291-2331346:-1:exon
so has part: feature:2326390-2326456:-1:exon
so has part: feature:2325895-2326001:-1:exon
so has part: feature:2325735-2325777:-1:exon
so has part: feature:2324317-2324388:-1:exon
so has part: feature:2320899-2321029:-1:exon
so has part: feature:2320285-2320342:-1:exon
so has part: feature:2318312-2318572:-1:exon
so has part: feature:2314712-2314824:-1:exon
so has part: feature:2311206-2312751:-1:exon

position:2359776:-1
position: 2359776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2359229-2359776:-1:exon

position:2359229:-1
position: 2359229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2352711-2352778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347819-2347963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2344668-2344730:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2331448-2331540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2331291-2331346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2326390-2326456:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2325895-2326001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2325735-2325777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2324317-2324388:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2320899-2321029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2320285-2320342:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2318312-2318572:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2314712-2314824:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2311206-2312751:-1:exon

LOC121271986
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121271986
product: E3 ubiquitin-protein ligase ARIH1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178266.1
SIO_010081: LOC121271986
subclass of: SO_0000673
so part of: LOC121271986
location: complement(join(2311206..2312751,2314712..2314824,2318312..2318572,2320285..2320342,2320899..2321029,2324317..2324388,2325735..2325777,2325895..2326001,2326390..2326456,2331291..2331346,2331448..2331540,2344668..2344730,2347819..2347963,2352711..2352778,2353823..2353891))
location: region:2311206-2353891:-1
so has part: feature:2353823-2353891:-1:exon
so has part: feature:2352711-2352778:-1:exon
so has part: feature:2347819-2347963:-1:exon
so has part: feature:2344668-2344730:-1:exon
so has part: feature:2331448-2331540:-1:exon
so has part: feature:2331291-2331346:-1:exon
so has part: feature:2326390-2326456:-1:exon
so has part: feature:2325895-2326001:-1:exon
so has part: feature:2325735-2325777:-1:exon
so has part: feature:2324317-2324388:-1:exon
so has part: feature:2320899-2321029:-1:exon
so has part: feature:2320285-2320342:-1:exon
so has part: feature:2318312-2318572:-1:exon
so has part: feature:2314712-2314824:-1:exon
so has part: feature:2311206-2312751:-1:exon

position:2353891:-1
position: 2353891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353823-2353891:-1:exon

position:2353823:-1
position: 2353823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2352711-2352778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347819-2347963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2344668-2344730:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2331448-2331540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2331291-2331346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2326390-2326456:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2325895-2326001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2325735-2325777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2324317-2324388:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2320899-2321029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2320285-2320342:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2318312-2318572:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2314712-2314824:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2311206-2312751:-1:exon

LOC121271986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121271986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase ARIH1 isoform X2
translation: MDSDEGYMYDEDEYSEESEPEDNFEIGEVEMQEPGLEPGQDGDGVGGGGGGLGGLGGLGGLGAEQEEEDYRYEVLSAEQIVQHMVECIREVNEVIENPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVVNPYKKSRTRQMNTRSSSQDMVCAICYLNYPNSYFTGLECGHKFCMQCWNEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVIKVQYPDAKPVRCKCGRQFCFNCAENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLRKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRKVLLQHVHEGYEKDLWEYIED
SIO_010081: LOC121271986
subclass of: SO_0000673
so part of: LOC121271986
location: complement(join(2312667..2312751,2314712..2314824,2318312..2318572,2320285..2320342,2320899..2321029,2324317..2324388,2325735..2325777,2325895..2326001,2326390..2326456,2331291..2331346,2331448..2331540,2347819..2347963,2352711..2352778,2364209..2364496))
location: region:2312667-2364496:-1
so has part: feature:2364209-2364496:-1:exon
so has part: feature:2352711-2352778:-1:exon
so has part: feature:2347819-2347963:-1:exon
so has part: feature:2331448-2331540:-1:exon
so has part: feature:2331291-2331346:-1:exon
so has part: feature:2326390-2326456:-1:exon
so has part: feature:2325895-2326001:-1:exon
so has part: feature:2325735-2325777:-1:exon
so has part: feature:2324317-2324388:-1:exon
so has part: feature:2320899-2321029:-1:exon
so has part: feature:2320285-2320342:-1:exon
so has part: feature:2318312-2318572:-1:exon
so has part: feature:2314712-2314824:-1:exon
so has part: feature:2312667-2312751:-1:exon

XP_041034198.1
type: Protein
SIO_000068: ncbiprotein

position:2312667:-1
position: 2312667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2364496:-1
position: 2364496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2364209-2364496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2352711-2352778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347819-2347963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2331448-2331540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2331291-2331346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2326390-2326456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2325895-2326001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2325735-2325777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2324317-2324388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2320899-2321029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2320285-2320342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2318312-2318572:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2314712-2314824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2312667-2312751:-1:exon

LOC121271986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121271986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase arih1 isoform X1
translation: MDSDEGYMYDEDEYSEESEPEDNFEIGEVEMQEPGLEPGQDGDGVGGGGGGLGGLGGLGGLGAEQEEEDYRYEVLSAEQIVQHMVECIREVNEVIENPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVVNPYKKSRTRQMNTRSSSQDMVCAICYLNYPNSKEESGGSGSATRITNSVSDCQYFTGLECGHKFCMQCWNEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVIKVQYPDAKPVRCKCGRQFCFNCAENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLRKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRKVLLQHVHEGYEKDLWEYIED
SIO_010081: LOC121271986
subclass of: SO_0000673
so part of: LOC121271986
location: complement(join(2312667..2312751,2314712..2314824,2318312..2318572,2320285..2320342,2320899..2321029,2324317..2324388,2325735..2325777,2325895..2326001,2326390..2326456,2331291..2331346,2331448..2331540,2344668..2344730,2347819..2347963,2352711..2352778,2364209..2364496))
location: region:2312667-2364496:-1
so has part: feature:2364209-2364496:-1:exon
so has part: feature:2352711-2352778:-1:exon
so has part: feature:2347819-2347963:-1:exon
so has part: feature:2344668-2344730:-1:exon
so has part: feature:2331448-2331540:-1:exon
so has part: feature:2331291-2331346:-1:exon
so has part: feature:2326390-2326456:-1:exon
so has part: feature:2325895-2326001:-1:exon
so has part: feature:2325735-2325777:-1:exon
so has part: feature:2324317-2324388:-1:exon
so has part: feature:2320899-2321029:-1:exon
so has part: feature:2320285-2320342:-1:exon
so has part: feature:2318312-2318572:-1:exon
so has part: feature:2314712-2314824:-1:exon
so has part: feature:2312667-2312751:-1:exon

XP_041034197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2364209-2364496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2352711-2352778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347819-2347963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2344668-2344730:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2331448-2331540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2331291-2331346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2326390-2326456:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2325895-2326001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2325735-2325777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2324317-2324388:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2320899-2321029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2320285-2320342:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2318312-2318572:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2314712-2314824:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2312667-2312751:-1:exon

LOC121271986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121271986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase ARIH1 isoform X3
translation: MNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVVNPYKKSRTRQMNTRSSSQDMVCAICYLNYPNSKEESGGSGSATRITNSVSDCQYFTGLECGHKFCMQCWNEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVIKVQYPDAKPVRCKCGRQFCFNCAENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLRKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRKVLLQHVHEGYEKDLWEYIED
SIO_010081: LOC121271986
subclass of: SO_0000673
so part of: LOC121271986
location: complement(join(2312667..2312751,2314712..2314824,2318312..2318572,2320285..2320342,2320899..2321029,2324317..2324388,2325735..2325777,2325895..2326001,2326390..2326456,2331291..2331346,2331448..2331540,2344668..2344730,2347819..2347963,2352711..2352778,2359229..2359231))
location: region:2312667-2359231:-1
so has part: feature:2359229-2359231:-1:exon
so has part: feature:2352711-2352778:-1:exon
so has part: feature:2347819-2347963:-1:exon
so has part: feature:2344668-2344730:-1:exon
so has part: feature:2331448-2331540:-1:exon
so has part: feature:2331291-2331346:-1:exon
so has part: feature:2326390-2326456:-1:exon
so has part: feature:2325895-2326001:-1:exon
so has part: feature:2325735-2325777:-1:exon
so has part: feature:2324317-2324388:-1:exon
so has part: feature:2320899-2321029:-1:exon
so has part: feature:2320285-2320342:-1:exon
so has part: feature:2318312-2318572:-1:exon
so has part: feature:2314712-2314824:-1:exon
so has part: feature:2312667-2312751:-1:exon

XP_041034199.1
type: Protein
SIO_000068: ncbiprotein

position:2359231:-1
position: 2359231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2359229-2359231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2352711-2352778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2347819-2347963:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2344668-2344730:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2331448-2331540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2331291-2331346:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2326390-2326456:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2325895-2326001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2325735-2325777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2324317-2324388:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2320899-2321029:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2320285-2320342:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2318312-2318572:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2314712-2314824:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2312667-2312751:-1:exon

LOC121271986
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121271986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase ARIH1 isoform X4
translation: MERYFDGNLEKLFAECHVVNPYKKSRTRQMNTRSSSQDMVCAICYLNYPNSKEESGGSGSATRITNSVSDCQYFTGLECGHKFCMQCWNEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVIKVQYPDAKPVRCKCGRQFCFNCAENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLRKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRKVLLQHVHEGYEKDLWEYIED
SIO_010081: LOC121271986
subclass of: SO_0000673
so part of: LOC121271986
location: complement(join(2312667..2312751,2314712..2314824,2318312..2318572,2320285..2320342,2320899..2321029,2324317..2324388,2325735..2325777,2325895..2326001,2326390..2326456,2331291..2331346,2331448..2331540,2344668..2344730,2347819..2347963,2352711..2352718))
location: region:2312667-2352718:-1
so has part: feature:2352711-2352718:-1:exon
so has part: feature:2347819-2347963:-1:exon
so has part: feature:2344668-2344730:-1:exon
so has part: feature:2331448-2331540:-1:exon
so has part: feature:2331291-2331346:-1:exon
so has part: feature:2326390-2326456:-1:exon
so has part: feature:2325895-2326001:-1:exon
so has part: feature:2325735-2325777:-1:exon
so has part: feature:2324317-2324388:-1:exon
so has part: feature:2320899-2321029:-1:exon
so has part: feature:2320285-2320342:-1:exon
so has part: feature:2318312-2318572:-1:exon
so has part: feature:2314712-2314824:-1:exon
so has part: feature:2312667-2312751:-1:exon

XP_041034200.1
type: Protein
SIO_000068: ncbiprotein

position:2352718:-1
position: 2352718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352711-2352718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2347819-2347963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2344668-2344730:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2331448-2331540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2331291-2331346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2326390-2326456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2325895-2326001:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2325735-2325777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2324317-2324388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2320899-2321029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2320285-2320342:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2318312-2318572:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2314712-2314824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2312667-2312751:-1:exon

LOC121272092
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2365613..2450608
location: region:2365613-2450608:1
so has part: feature:2365613-2450608:1:exon
subclass of: SO_0000010

121272092
type: Gene
SIO_000068: ncbigene

position:2365613:1
position: 2365613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2450608:1
position: 2450608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365613-2450608:1:exon

LOC121272092
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272092
product: chondroitin sulfate proteoglycan 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178535.1
SIO_010081: LOC121272092
subclass of: SO_0000673
so part of: LOC121272092
location: join(2365613..2365672,2409072..2409235,2412494..2416051,2425823..2426281,2426799..2426975,2435910..2436108,2438516..2438647,2439019..2439191,2442559..2442742,2447146..2450608)
location: region:2365613-2450608:1
so has part: feature:2365613-2365672:1:exon
so has part: feature:2409072-2409235:1:exon
so has part: feature:2412494-2416051:1:exon
so has part: feature:2425823-2426281:1:exon
so has part: feature:2426799-2426975:1:exon
so has part: feature:2435910-2436108:1:exon
so has part: feature:2438516-2438647:1:exon
so has part: feature:2439019-2439191:1:exon
so has part: feature:2442559-2442742:1:exon
so has part: feature:2447146-2450608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2365613-2365672:1:exon

position:2365672:1
position: 2365672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2409072-2409235:1:exon

position:2409072:1
position: 2409072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2409235:1
position: 2409235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2412494-2416051:1:exon

position:2412494:1
position: 2412494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416051:1
position: 2416051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2425823-2426281:1:exon

position:2425823:1
position: 2425823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2426281:1
position: 2426281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2426799-2426975:1:exon

position:2426799:1
position: 2426799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2426975:1
position: 2426975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2435910-2436108:1:exon

position:2435910:1
position: 2435910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2436108:1
position: 2436108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2438516-2438647:1:exon

position:2438516:1
position: 2438516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438647:1
position: 2438647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2439019-2439191:1:exon

position:2439019:1
position: 2439019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2439191:1
position: 2439191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2442559-2442742:1:exon

position:2442559:1
position: 2442559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2442742:1
position: 2442742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2447146-2450608:1:exon

position:2447146:1
position: 2447146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121272092
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate proteoglycan 4-like
translation: MEVRELGAFTSSRLSMKFLTSRQNGLLFLASGHSDYLLMELYAGALQVKLELGSGEAVLHSQTGLKLNNLVWHDVYLVHENKTLSLTVDELFTTSVEVPGHPDKLNINNALYVGGLGEAKIPYLSRQSSHFRGCISKAEFNDYDMLSSLASHPEYRTVYEIEDGCSNVIVAGDNYPTNFLGPESYISFPSWNAREEGTFECFLKTVIQHAPLLYHAGWQTDFIVLEITDGHLRVLLDNGSGIVVLDNTHFVSDGKWHSVNLLFNMNHIQIKVDDELSQKQLTDNEKTYLDLRGHMFIGGIDNKASLELIKRGLSYMLVERTVSGSFVGCIQNIRVNLEKKSLADALVTKGIDTVCEDEESEGLKEGKNKVEDEISATAIPSFWEVPTTNAPCLLSKNISKVFSNFTRLLDLTPLIVKEGGISTLELNHIHPTIDLRRIGVRNSQVVFKIIQDARHGHLELNIPGAKSRKAFTLLDVIHHHITYHHDGSEGSLDQLTFEVSAHSKQEIPNCLRQGQQYIFTIKIIPINDPPKLIFPNGNLMMILKNTWKTLGPDVIRIVDADNVCSELKIIIVNKEDPGYVEDMRNPGQRVGEFSCQDLKVGNIRYVHSGAKVSELLLQVSDGEKISNPTPLRIVALKPDVQVGNNTGLILPQGGVSLITISNLSVETNAVRQKVDILYNITEPLYYGEVQNLDNNGEWKPVKIFHQDDIEQGHLRYFSTDPEFRKHDTTEKLEFAVIIGQKILENNTFFIKIKRAKITLVRISPNELNNVRRGKITQNELEAAIEGHTIPADLFRYVILKSPAKGKLLVLDEELKVGSTFTQEDLKQVGLTYEATVRNAEETQDSFQFQVFVGDQHSPVYTYPILIGIDPEVPILMSKSLVVVEGGIQTITKDQLFTIGQSTTAFVYNITQAPQHGKLFTQTDLEKPITIFTNDDILQERLMYKHDDSETLEDKIVFVVVEQSKDDEPEADVILGTLKILIRPTNDQPPVRVVNKTFNVTLNGQHLLTTAELRFHDADSNFDDSQLIYTKWGISNGNIVSADDTAHELSRFSQDDMEKKRVLFKHHGAHRGTFQLQVSDGVHQTMTVLEVHALDPFLRIVNNSTFLVHQGQESPILGYLLGVESNMDIWSEEEIVYRVTFPPSHGEILVSGELDHSFSQKDINDGLVVYRHDNSRHSRDSFNFVVEVKEVKAKGTFPILIFKESHRHPPIVVHNKKLFVDQGEAKKIWDEQLLVFHNDSVPSDLIYSVKAAPVNGQLVMVTESLTGQQEPLKSFSQDDINGGRVQYVNSRFSPQGDAFILDVSNGFKTVDGLTVLVELIPDVILLVTQNISVREGDAQALTGDILNISNYLTSLNFEFYVTKVPKHGRIGHQRFPEDSVSSFTMGAVKEEAVFYFHDNSETLMDSFTIIANISEIGRQSEPMSVTVTVIPINDEAPVVTINTELKIWEDSNAEISQDLLNSEDPDSPAEELVYSIKPPSNGHVALKSLLDDSILEFTQAQINNRQITFVHHGSLSGGFSFEVSDGMNRTPTQLFTVSARHLNILIETEEPLVIYPGTRQPITSQHLKARTSDDSKTNNRPIIYTIVIPPALGQLIRVQEGNVIRKVSNFTERDLEAANVFYQHNRPKDPFWKSQDSFQFTVSCPPAVTERQTLMLWISFENRSHEQGTQLWYNKGLVLPEGQSAAIDQSMLDASNLLASVPKPQQSAYHVIFEVTMQPIHGFLSLADVRKVQHFTQSDLFDSVLQYTHNRVGALTDSFTFRVWLSPRRKSFSHPADDGSVIVISELFNITVVPVKDHPPRIVTTGLTLHVLQGSSFVLTQDHMNTVDFDNLPEEILYSIVTGPDNGFFVNQVNDSTVVKQFTQADINAGRVLFKAAGQAASGLFQFSVSDGKYSAVGGFVTIEVTPVTVNMIHNKEIVLLQGNASVPITREELLIDTKENDVILYKIIQQPKYGKIIVNQSVVTEFLQKHIDNGELKYYMKDFSVYRDSFHFCAVTREGN…
SIO_010081: LOC121272092
subclass of: SO_0000673
so part of: LOC121272092
location: join(2409095..2409235,2412494..2416051,2425823..2426281,2426799..2426975,2435910..2436108,2438516..2438647,2439019..2439191,2442559..2442742,2447146..2449067)
location: region:2409095-2449067:1
so has part: feature:2409095-2409235:1:exon
so has part: feature:2412494-2416051:1:exon
so has part: feature:2425823-2426281:1:exon
so has part: feature:2426799-2426975:1:exon
so has part: feature:2435910-2436108:1:exon
so has part: feature:2438516-2438647:1:exon
so has part: feature:2439019-2439191:1:exon
so has part: feature:2442559-2442742:1:exon
so has part: feature:2447146-2449067:1:exon

XP_041034469.1
type: Protein
SIO_000068: ncbiprotein

position:2409095:1
position: 2409095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2449067:1
position: 2449067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2409095-2409235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2412494-2416051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2425823-2426281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2426799-2426975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2435910-2436108:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2438516-2438647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2439019-2439191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2442559-2442742:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2447146-2449067:1:exon

snx33
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: snx33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2614880..2636816)
location: region:2614880-2636816:-1
so has part: feature:2614880-2636816:-1:exon
subclass of: SO_0000010

121271989
type: Gene
SIO_000068: ncbigene

position:2614880:-1
position: 2614880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2636816:-1
position: 2636816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2614880-2636816:-1:exon

snx33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: snx33
product: sorting nexin 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178272.1
SIO_010081: snx33
subclass of: SO_0000673
so part of: snx33
location: complement(join(2614880..2615334,2635056..2636816))
location: region:2614880-2636816:-1
so has part: feature:2635056-2636816:-1:exon
so has part: feature:2614880-2615334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2635056-2636816:-1:exon

position:2635056:-1
position: 2635056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2614880-2615334:-1:exon

position:2615334:-1
position: 2615334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

snx33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: snx33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-33
translation: MASIKAKALYSFQSENPEEISIQENEQLLVFNEKSLDGWLEGQNSRGDKGLFPASYVEILKPSTPSPSTSNSSFTHYSSPASSPGNHSAFYSPSYASPYQQGSYEEDDDDDWDDWDDSSTVVDEPGVTSNTNGHNHLHPYTVSPYPSVIYRQKPSVERQDSTASRLSTKSSAVGKNFNRFSSFVRSGGEAFILGEVPSVFKTSETYCVVMSPDGPQWSESPHPFTCTIEEPTKQTKFKGIKSYISYKLTPSHTNYPVYRRYKHFDWLHNRLLHKFSVISVPHLPEKQATGRFEDDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLTCTDDRAWKQGKRRMEKDELVGANSFLTIQIPQEHQDLQDVEERVDTFKTFSKRMDDSVLQLTNVATDLCRKHTGGFRKEFQKLGNAFNSISQAFELDQPHLAIPLNKAISNTGKTYEAIGELFAEQPKNDLFHMLDTLSLYQGLLSNFPDIIHVQKGAFAKVKDSQRMSDEGKMDQEQVDGIKRRCRVVGFALQAEMNHFHKRRIIDFKRMMQSYLQQQILFYQRIGQQLEQTLHLYDTL
SIO_010081: snx33
subclass of: SO_0000673
so part of: snx33
location: complement(join(2615081..2615334,2635056..2636508))
location: region:2615081-2636508:-1
so has part: feature:2635056-2636508:-1:exon
so has part: feature:2615081-2615334:-1:exon

XP_041034206.1
type: Protein
SIO_000068: ncbiprotein

position:2615081:-1
position: 2615081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2636508:-1
position: 2636508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2635056-2636508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2615081-2615334:-1:exon

LOC121271990
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121271990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2641982..2673920
location: region:2641982-2673920:1
so has part: feature:2641982-2673920:1:exon
subclass of: SO_0000010

121271990
type: Gene
SIO_000068: ncbigene

position:2641982:1
position: 2641982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2673920:1
position: 2673920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2641982-2673920:1:exon

LOC121271990
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121271990
product: sorting nexin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178273.1
SIO_010081: LOC121271990
subclass of: SO_0000673
so part of: LOC121271990
location: join(2641982..2642111,2654328..2654424,2655644..2655771,2656626..2656701,2658922..2658965,2659334..2659475,2660261..2660339,2663976..2664051,2665244..2665357,2666081..2666174,2667802..2668007,2668684..2668827,2670435..2670515,2670668..2670739,2672019..2673920)
location: region:2641982-2673920:1
so has part: feature:2641982-2642111:1:exon
so has part: feature:2654328-2654424:1:exon
so has part: feature:2655644-2655771:1:exon
so has part: feature:2656626-2656701:1:exon
so has part: feature:2658922-2658965:1:exon
so has part: feature:2659334-2659475:1:exon
so has part: feature:2660261-2660339:1:exon
so has part: feature:2663976-2664051:1:exon
so has part: feature:2665244-2665357:1:exon
so has part: feature:2666081-2666174:1:exon
so has part: feature:2667802-2668007:1:exon
so has part: feature:2668684-2668827:1:exon
so has part: feature:2670435-2670515:1:exon
so has part: feature:2670668-2670739:1:exon
so has part: feature:2672019-2673920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2641982-2642111:1:exon

position:2642111:1
position: 2642111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2654328-2654424:1:exon

position:2654328:1
position: 2654328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2654424:1
position: 2654424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2655644-2655771:1:exon

position:2655644:1
position: 2655644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2655771:1
position: 2655771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2656626-2656701:1:exon

position:2656626:1
position: 2656626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2656701:1
position: 2656701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2658922-2658965:1:exon

position:2658922:1
position: 2658922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2658965:1
position: 2658965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2659334-2659475:1:exon

position:2659334:1
position: 2659334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2659475:1
position: 2659475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2660261-2660339:1:exon

position:2660261:1
position: 2660261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2660339:1
position: 2660339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2663976-2664051:1:exon

position:2663976:1
position: 2663976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2664051:1
position: 2664051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2665244-2665357:1:exon

position:2665244:1
position: 2665244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2665357:1
position: 2665357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2666081-2666174:1:exon

position:2666081:1
position: 2666081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666174:1
position: 2666174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2667802-2668007:1:exon

position:2667802:1
position: 2667802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2668007:1
position: 2668007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2668684-2668827:1:exon

position:2668684:1
position: 2668684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2668827:1
position: 2668827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2670435-2670515:1:exon

position:2670435:1
position: 2670435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2670515:1
position: 2670515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2670668-2670739:1:exon

position:2670668:1
position: 2670668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2670739:1
position: 2670739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2672019-2673920:1:exon

position:2672019:1
position: 2672019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121271990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121271990
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-1-like
translation: MAAERRQPAILEPEGEGEDIFTGSTCPSEMDSRKTPCSNSKTNGIHSDDDEQDIFAEATVELSLDSPQNDNQSKPSAAGLTVTVPPSSAIQSQTKIYQELEEEEVEEDEDQFDMKVTVTEPEKVGDGMAAYMAYKVSTLTSLTMFKRKDFSVKRRFSDFLGLYDRLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLERRRAALERYLQRIIKHPTLLQDPDVREFLEKDELPRAVNTQALSGAGLLRMVNKAADAVSKMTIKMNESDIWFEEKFQEIENEDQQLRKLHAVVETLVNHRKELAMNTAIFAKSAAMLGSSEDHTALSRALSQLAEVEEKIEQLYQDQANSDFFLFAELLSDYIRLISAVRGVFDQRMKAWQRWQDAQTTLQKRRENEARLIWANKPDKLQQAKDEITEWEPKVLQYEREFERISITIRKEVARFEKEQIKDFKSRIIVYLETLLNSQQQLIKYWEAFLPEAKAIA
SIO_010081: LOC121271990
subclass of: SO_0000673
so part of: LOC121271990
location: join(2642040..2642111,2654328..2654424,2655644..2655771,2656626..2656701,2658922..2658965,2659334..2659475,2660261..2660339,2663976..2664051,2665244..2665357,2666081..2666174,2667802..2668007,2668684..2668827,2670435..2670515,2670668..2670739,2672019..2672069)
location: region:2642040-2672069:1
so has part: feature:2642040-2642111:1:exon
so has part: feature:2654328-2654424:1:exon
so has part: feature:2655644-2655771:1:exon
so has part: feature:2656626-2656701:1:exon
so has part: feature:2658922-2658965:1:exon
so has part: feature:2659334-2659475:1:exon
so has part: feature:2660261-2660339:1:exon
so has part: feature:2663976-2664051:1:exon
so has part: feature:2665244-2665357:1:exon
so has part: feature:2666081-2666174:1:exon
so has part: feature:2667802-2668007:1:exon
so has part: feature:2668684-2668827:1:exon
so has part: feature:2670435-2670515:1:exon
so has part: feature:2670668-2670739:1:exon
so has part: feature:2672019-2672069:1:exon

XP_041034207.1
type: Protein
SIO_000068: ncbiprotein

position:2642040:1
position: 2642040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2672069:1
position: 2672069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2642040-2642111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2654328-2654424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2655644-2655771:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2656626-2656701:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2658922-2658965:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2659334-2659475:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2660261-2660339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2663976-2664051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2665244-2665357:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2666081-2666174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2667802-2668007:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2668684-2668827:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2670435-2670515:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2670668-2670739:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2672019-2672069:1:exon

LOC121272047
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2682274..2699415
location: region:2682274-2699415:1
so has part: feature:2682274-2699415:1:exon
subclass of: SO_0000010

121272047
type: Gene
SIO_000068: ncbigene

position:2682274:1
position: 2682274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2699415:1
position: 2699415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2682274-2699415:1:exon

LOC121272047
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272047
product: sorting nexin-24-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178445.1
SIO_010081: LOC121272047
subclass of: SO_0000673
so part of: LOC121272047
location: join(2682274..2683118,2685463..2685546,2689984..2690088,2690850..2690944,2692339..2692371,2693102..2693163,2699195..2699415)
location: region:2682274-2699415:1
so has part: feature:2682274-2683118:1:exon
so has part: feature:2685463-2685546:1:exon
so has part: feature:2689984-2690088:1:exon
so has part: feature:2690850-2690944:1:exon
so has part: feature:2692339-2692371:1:exon
so has part: feature:2693102-2693163:1:exon
so has part: feature:2699195-2699415:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2682274-2683118:1:exon

position:2683118:1
position: 2683118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2685463-2685546:1:exon

position:2685463:1
position: 2685463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2685546:1
position: 2685546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2689984-2690088:1:exon

position:2689984:1
position: 2689984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2690088:1
position: 2690088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2690850-2690944:1:exon

position:2690850:1
position: 2690850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2690944:1
position: 2690944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2692339-2692371:1:exon

position:2692339:1
position: 2692339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2692371:1
position: 2692371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2693102-2693163:1:exon

position:2693102:1
position: 2693102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2693163:1
position: 2693163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2699195-2699415:1:exon

position:2699195:1
position: 2699195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121272047
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272047
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-24-like
translation: MIQIRIPSIGQEAAGDSEKVHTVFQIEVLNNGRKHLVERRYRDFQALHKKLKKMTKTPDFPPKRGLNRRPKALEQKRIGLEAYLQGLVCDNQHLSREILDFLNIKHIPPGKQTNTLSILEQLDLQNYRCFCHQVVTFTKDAFAHPNTADLLPNVTVMGVLQGLYLCDPETQNGVDSAGTVQWHIPGPESIV
SIO_010081: LOC121272047
subclass of: SO_0000673
so part of: LOC121272047
location: join(2683053..2683118,2685463..2685546,2689984..2690088,2690850..2690944,2692339..2692371,2693102..2693163,2699195..2699325)
location: region:2683053-2699325:1
so has part: feature:2683053-2683118:1:exon
so has part: feature:2685463-2685546:1:exon
so has part: feature:2689984-2690088:1:exon
so has part: feature:2690850-2690944:1:exon
so has part: feature:2692339-2692371:1:exon
so has part: feature:2693102-2693163:1:exon
so has part: feature:2699195-2699325:1:exon

XP_041034379.1
type: Protein
SIO_000068: ncbiprotein

position:2683053:1
position: 2683053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2699325:1
position: 2699325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2683053-2683118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2685463-2685546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2689984-2690088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2690850-2690944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2692339-2692371:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2693102-2693163:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2699195-2699325:1:exon

ppib
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: ppib
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2700737..2709656)
location: region:2700737-2709656:-1
so has part: feature:2700737-2709656:-1:exon
subclass of: SO_0000010

121272046
type: Gene
SIO_000068: ncbigene

position:2700737:-1
position: 2700737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2709656:-1
position: 2709656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2700737-2709656:-1:exon

ppib
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: ppib
product: peptidylprolyl isomerase B (cyclophilin B)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178444.1
SIO_010081: ppib
subclass of: SO_0000673
so part of: ppib
location: complement(join(2700737..2701056,2704206..2704390,2706101..2706194,2706398..2706511,2709512..2709656))
location: region:2700737-2709656:-1
so has part: feature:2709512-2709656:-1:exon
so has part: feature:2706398-2706511:-1:exon
so has part: feature:2706101-2706194:-1:exon
so has part: feature:2704206-2704390:-1:exon
so has part: feature:2700737-2701056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2709512-2709656:-1:exon

position:2709512:-1
position: 2709512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2706398-2706511:-1:exon

position:2706398:-1
position: 2706398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706511:-1
position: 2706511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2706101-2706194:-1:exon

position:2706101:-1
position: 2706101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706194:-1
position: 2706194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2704206-2704390:-1:exon

position:2704206:-1
position: 2704206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2704390:-1
position: 2704390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2700737-2701056:-1:exon

position:2701056:-1
position: 2701056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ppib
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: ppib
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase B
translation: MRLSAWKMKLLLVAALLTAALTFLLLPGASQAEEKKKGPKVTVKVYFDIKIGDEDAGRIVFGLFGKTVPKTVENFVALATGEKGFGYKNSKFHRVIKEFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTAKTSWLDGKHVVFGKVIEGFDVVKKVEASKTDSRDKPLKDVVIAECGKIEVEKPYAIAKE
SIO_010081: ppib
subclass of: SO_0000673
so part of: ppib
location: complement(join(2700934..2701056,2704206..2704390,2706101..2706194,2706398..2706511,2709512..2709643))
location: region:2700934-2709643:-1
so has part: feature:2709512-2709643:-1:exon
so has part: feature:2706398-2706511:-1:exon
so has part: feature:2706101-2706194:-1:exon
so has part: feature:2704206-2704390:-1:exon
so has part: feature:2700934-2701056:-1:exon

XP_041034378.1
type: Protein
SIO_000068: ncbiprotein

position:2700934:-1
position: 2700934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2709643:-1
position: 2709643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2709512-2709643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2706398-2706511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2706101-2706194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2704206-2704390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2700934-2701056:-1:exon

LOC121272166
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272166
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2705825..2705967)
location: region:2705825-2705967:-1
so has part: feature:2705825-2705967:-1:exon
subclass of: SO_0000578

121272166
type: Gene
SIO_000068: ncbigene

position:2705825:-1
position: 2705825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705967:-1
position: 2705967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2705825-2705967:-1:exon

LOC121272166
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13397
nc RNA class: snoRNA
gene: LOC121272166
product: small nucleolar RNA SNORA79
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00600
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005941858.1
SIO_010081: LOC121272166
subclass of: SO_0000673
so part of: LOC121272166
location: complement(2705825..2705967)
location: region:2705825-2705967:-1
so has part: feature:2705825-2705967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2705825-2705967:-1:exon

LOC121272106
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: LOC121272106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2892975..2895071)
location: region:2892975-2895071:-1
so has part: feature:2892975-2895071:-1:exon
subclass of: SO_0000010

121272106
type: Gene
SIO_000068: ncbigene

position:2892975:-1
position: 2892975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2895071:-1
position: 2895071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2892975-2895071:-1:exon

LOC121272106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: LOC121272106
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041178550.1
SIO_010081: LOC121272106
subclass of: SO_0000673
so part of: LOC121272106
location: complement(2892975..2895071)
location: region:2892975-2895071:-1
so has part: feature:2892975-2895071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2892975-2895071:-1:exon

LOC121272106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: LOC121272106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
translation: MLPGEVGMQSCGLTCWQPILLLILGAVLSGHAMGCPARCDCLAQERSVVCHRKRFITVPEGIPTETRLLDLSKNRIKTINQDEFAAYPLLEELELNENIISTVEPGAFSNLFNLRSLGLRSNRLKLIPLGVFTGLNNLTQLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLHSLEQLTLEKCNLTTIPTEALSHLHGLIVLRLRFLNINVIQNYSFKRLYRLKVLEISHWPFLDTMAPNCLYGLNLTSLTITSCNLTSVPYVAIRHLVYLKFLNLSFNPITTVQGHMMQELLRLQEIHLAGGQLNTIEPYAFRGLNHLRVLNVSSNYLTTLEEAVFHSVGNLETLIMDNNPLACDCRLLWIFRRRWRLNFNREQPVCTTPEIVQGKEFKDFPDVLLPNYFTCRKARIRDKKPQRIYVDEGHTVHFVCRADGDPPPVILWVSPRKRQISSKTNGRLTVFPDGTLEVRYAQLQDNGSYQCIAMNAGGNDTSSASLHVRGYSPDWGQQPNKTFAFITNQPNDSNANNTRASVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIGTADAPRKFNMKMI
SIO_010081: LOC121272106
subclass of: SO_0000673
so part of: LOC121272106
location: complement(2893226..2895067)
location: region:2893226-2895067:-1
so has part: feature:2893226-2895067:-1:exon

XP_041034484.1
type: Protein
SIO_000068: ncbiprotein

position:2893226:-1
position: 2893226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2895067:-1
position: 2895067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893226-2895067:-1:exon

nr2e3
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: nr2e3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4413410..4421086
location: region:4413410-4421086:1
so has part: feature:4413410-4421086:1:exon
subclass of: SO_0000010

121272086
type: Gene
SIO_000068: ncbigene

position:4413410:1
position: 4413410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4421086:1
position: 4421086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4413410-4421086:1:exon

nr2e3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: nr2e3
product: nuclear receptor subfamily 2, group E, member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
transcript id: XM_041178528.1
SIO_010081: nr2e3
subclass of: SO_0000673
so part of: nr2e3
location: join(4413410..4413467,4414948..4415098,4415773..4415876,4416064..4416306,4416908..4417089,4418323..4418563,4419753..4419858,4420954..4421086)
location: region:4413410-4421086:1
so has part: feature:4413410-4413467:1:exon
so has part: feature:4414948-4415098:1:exon
so has part: feature:4415773-4415876:1:exon
so has part: feature:4416064-4416306:1:exon
so has part: feature:4416908-4417089:1:exon
so has part: feature:4418323-4418563:1:exon
so has part: feature:4419753-4419858:1:exon
so has part: feature:4420954-4421086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4413410-4413467:1:exon

position:4413467:1
position: 4413467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4414948-4415098:1:exon

position:4414948:1
position: 4414948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4415098:1
position: 4415098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4415773-4415876:1:exon

position:4415773:1
position: 4415773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4415876:1
position: 4415876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4416064-4416306:1:exon

position:4416064:1
position: 4416064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4416306:1
position: 4416306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4416908-4417089:1:exon

position:4416908:1
position: 4416908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4417089:1
position: 4417089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4418323-4418563:1:exon

position:4418323:1
position: 4418323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4418563:1
position: 4418563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4419753-4419858:1:exon

position:4419753:1
position: 4419753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4419858:1
position: 4419858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4420954-4421086:1:exon

position:4420954:1
position: 4420954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

nr2e3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: nr2e3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: photoreceptor-specific nuclear receptor
translation: MSSSPTESSVSPGLEDSQAVKTPSPGKSLSPVLMCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRTDTAELDPDKEHIATTREPTSSSVSTQRPVSSNISSSQRTISPPNNHRFMASLMTAETCAKLEPEDVDENIDVTSNEPERTSTEYQMSIYPPSSPECVYETSARLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWNELFLLCAIQWSMPLESCPLLSLPELSHSPQGKSNSTMADVRILQEIMSRFKAIAVDPTEFACLKAVVLFKPETRGLKDPEQVENLQDQSQVMLGQHSRTHYPIQPVRFGKLLLLLPSLRFVSSEQIELLFFHRTIGNTPMEKLLCDMFKS
SIO_010081: nr2e3
subclass of: SO_0000673
so part of: nr2e3
location: join(4413410..4413467,4414948..4415098,4415773..4415876,4416064..4416306,4416908..4417089,4418323..4418563,4419753..4419858,4420954..4421086)
location: region:4413410-4421086:1
so has part: feature:4413410-4413467:1:exon
so has part: feature:4414948-4415098:1:exon
so has part: feature:4415773-4415876:1:exon
so has part: feature:4416064-4416306:1:exon
so has part: feature:4416908-4417089:1:exon
so has part: feature:4418323-4418563:1:exon
so has part: feature:4419753-4419858:1:exon
so has part: feature:4420954-4421086:1:exon

XP_041034462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4413410-4413467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4414948-4415098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4415773-4415876:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416064-4416306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416908-4417089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4418323-4418563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4419753-4419858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4420954-4421086:1:exon

myo9aa
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4427922..4717790)
location: region:4427922-4717790:-1
so has part: feature:4427922-4717790:-1:exon
subclass of: SO_0000010

121271995
type: Gene
SIO_000068: ncbigene

position:4427922:-1
position: 4427922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4717790:-1
position: 4717790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4427922-4717790:-1:exon

myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: myo9aa
product: myosin IXAa, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178287.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(4427922..4431707,4432914..4433056,4435311..4435513,4446042..4446165,4450831..4450962,4452442..4452547,4454275..4454403,4454855..4455047,4457264..4457325,4457850..4457961,4460062..4460109,4461168..4461356,4461691..4461807,4462346..4462575,4465370..4465578,4466830..4466936,4475878..4476090,4476927..4477029,4480417..4482165,4482549..4482853,4483468..4483617,4484452..4484574,4485569..4485679,4486456..4486536,4488775..4488897,4497489..4497528,4499878..4500021,4508929..4509004,4511519..4511638,4516586..4516781,4517895..4518036,4522599..4522720,4539147..4539281,4541247..4541363,4552929..4553018,4553971..4554097,4555959..4556056,4561244..4561300,4563947..4564046,4572351..4572413,4578929..4579023,4666989..4667895,4717593..4717790))
location: region:4427922-4717790:-1
so has part: feature:4717593-4717790:-1:exon
so has part: feature:4666989-4667895:-1:exon
so has part: feature:4578929-4579023:-1:exon
so has part: feature:4572351-4572413:-1:exon
so has part: feature:4563947-4564046:-1:exon
so has part: feature:4561244-4561300:-1:exon
so has part: feature:4555959-4556056:-1:exon
so has part: feature:4553971-4554097:-1:exon
so has part: feature:4552929-4553018:-1:exon
so has part: feature:4541247-4541363:-1:exon
so has part: feature:4539147-4539281:-1:exon
so has part: feature:4522599-4522720:-1:exon
so has part: feature:4517895-4518036:-1:exon
so has part: feature:4516586-4516781:-1:exon
so has part: feature:4511519-4511638:-1:exon
so has part: feature:4508929-4509004:-1:exon
so has part: feature:4499878-4500021:-1:exon
so has part: feature:4497489-4497528:-1:exon
so has part: feature:4488775-4488897:-1:exon
so has part: feature:4486456-4486536:-1:exon
so has part: feature:4485569-4485679:-1:exon
so has part: feature:4484452-4484574:-1:exon
so has part: feature:4483468-4483617:-1:exon
so has part: feature:4482549-4482853:-1:exon
so has part: feature:4480417-4482165:-1:exon
so has part: feature:4476927-4477029:-1:exon
so has part: feature:4475878-4476090:-1:exon
so has part: feature:4466830-4466936:-1:exon
so has part: feature:4465370-4465578:-1:exon
so has part: feature:4462346-4462575:-1:exon
so has part: feature:4461691-4461807:-1:exon
so has part: feature:4461168-4461356:-1:exon
so has part: feature:4460062-4460109:-1:exon
so has part: feature:4457850-4457961:-1:exon
so has part: feature:4457264-4457325:-1:exon
so has part: feature:4454855-4455047:-1:exon
so has part: feature:4454275-4454403:-1:exon
so has part: feature:4452442-4452547:-1:exon
so has part: feature:4450831-4450962:-1:exon
so has part: feature:4446042-4446165:-1:exon
so has part: feature:4435311-4435513:-1:exon
so has part: feature:4432914-4433056:-1:exon
so has part: feature:4427922-4431707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4717593-4717790:-1:exon

position:4717593:-1
position: 4717593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4666989-4667895:-1:exon

position:4666989:-1
position: 4666989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4667895:-1
position: 4667895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4578929-4579023:-1:exon

position:4578929:-1
position: 4578929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4579023:-1
position: 4579023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4572351-4572413:-1:exon

position:4572351:-1
position: 4572351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4572413:-1
position: 4572413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4563947-4564046:-1:exon

position:4563947:-1
position: 4563947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4564046:-1
position: 4564046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4561244-4561300:-1:exon

position:4561244:-1
position: 4561244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4561300:-1
position: 4561300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4555959-4556056:-1:exon

position:4555959:-1
position: 4555959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4556056:-1
position: 4556056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4553971-4554097:-1:exon

position:4553971:-1
position: 4553971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4554097:-1
position: 4554097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4552929-4553018:-1:exon

position:4552929:-1
position: 4552929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4553018:-1
position: 4553018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4541247-4541363:-1:exon

position:4541247:-1
position: 4541247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4541363:-1
position: 4541363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4539147-4539281:-1:exon

position:4539147:-1
position: 4539147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4539281:-1
position: 4539281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4522599-4522720:-1:exon

position:4522599:-1
position: 4522599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4522720:-1
position: 4522720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4517895-4518036:-1:exon

position:4517895:-1
position: 4517895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4518036:-1
position: 4518036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4516586-4516781:-1:exon

position:4516586:-1
position: 4516586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4516781:-1
position: 4516781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4511519-4511638:-1:exon

position:4511519:-1
position: 4511519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4511638:-1
position: 4511638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4508929-4509004:-1:exon

position:4508929:-1
position: 4508929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4509004:-1
position: 4509004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4499878-4500021:-1:exon

position:4499878:-1
position: 4499878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4500021:-1
position: 4500021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4497489-4497528:-1:exon

position:4497489:-1
position: 4497489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4497528:-1
position: 4497528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4488775-4488897:-1:exon

position:4488775:-1
position: 4488775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4488897:-1
position: 4488897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4486456-4486536:-1:exon

position:4486456:-1
position: 4486456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4486536:-1
position: 4486536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4485569-4485679:-1:exon

position:4485569:-1
position: 4485569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4485679:-1
position: 4485679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4484452-4484574:-1:exon

position:4484452:-1
position: 4484452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4484574:-1
position: 4484574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4483468-4483617:-1:exon

position:4483468:-1
position: 4483468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4483617:-1
position: 4483617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4482549-4482853:-1:exon

position:4482549:-1
position: 4482549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4482853:-1
position: 4482853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4480417-4482165:-1:exon

position:4480417:-1
position: 4480417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4482165:-1
position: 4482165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4476927-4477029:-1:exon

position:4476927:-1
position: 4476927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4477029:-1
position: 4477029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4475878-4476090:-1:exon

position:4475878:-1
position: 4475878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4476090:-1
position: 4476090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4466830-4466936:-1:exon

position:4466830:-1
position: 4466830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4466936:-1
position: 4466936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4465370-4465578:-1:exon

position:4465370:-1
position: 4465370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4465578:-1
position: 4465578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4462346-4462575:-1:exon

position:4462346:-1
position: 4462346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4462575:-1
position: 4462575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4461691-4461807:-1:exon

position:4461691:-1
position: 4461691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4461807:-1
position: 4461807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4461168-4461356:-1:exon

position:4461168:-1
position: 4461168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4461356:-1
position: 4461356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4460062-4460109:-1:exon

position:4460062:-1
position: 4460062
reference: sequence
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type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: myo9aa
product: myosin IXAa, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178288.1
SIO_010081: myo9aa
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myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: myo9aa
product: myosin IXAa, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178289.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
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myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: myo9aa
product: myosin IXAa, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178285.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
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so has part: feature:4435311-4435513:-1:exon
so has part: feature:4432914-4433056:-1:exon
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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SIO_000628: feature:4578929-4579023:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4572351-4572413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4563947-4564046:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4561244-4561300:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4555959-4556059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4553971-4554097:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4552929-4553018:-1:exon

urn:…
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SIO_000628: feature:4541247-4541363:-1:exon

urn:…
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SIO_000628: feature:4539147-4539281:-1:exon

urn:…
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SIO_000628: feature:4522599-4522720:-1:exon

urn:…
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urn:…
SIO_000300: 14
SIO_000628: feature:4516586-4516781:-1:exon

urn:…
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SIO_000628: feature:4511519-4511638:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4508929-4509004:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4499878-4500021:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4497489-4497528:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4488775-4488897:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4486456-4486536:-1:exon

urn:…
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SIO_000628: feature:4485569-4485679:-1:exon

urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:4483468-4483617:-1:exon

urn:…
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SIO_000628: feature:4482549-4482853:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4480417-4482165:-1:exon

urn:…
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SIO_000628: feature:4476927-4477029:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:4462346-4462575:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4461691-4461807:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4461168-4461356:-1:exon

urn:…
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SIO_000628: feature:4460062-4460109:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4457850-4457961:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4457264-4457325:-1:exon

urn:…
SIO_000300: 36
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:4450831-4450962:-1:exon

urn:…
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urn:…
SIO_000300: 41
SIO_000628: feature:4435311-4435513:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:4432914-4433056:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:4427922-4431707:-1:exon

myo9aa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: myo9aa
product: myosin IXAa, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178290.1
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(4427922..4431707,4432914..4433056,4435311..4435513,4446042..4446165,4450831..4450962,4452442..4452547,4454275..4454403,4454855..4455047,4457264..4457325,4457850..4457961,4460062..4460109,4461168..4461356,4461691..4461807,4462346..4462575,4465370..4465578,4466830..4466936,4475878..4476090,4476927..4477029,4480417..4482165,4482549..4482853,4483468..4483617,4484452..4484574,4485569..4485679,4486456..4486536,4488775..4488897,4497489..4497528,4499878..4500021,4508929..4509004,4511519..4511638,4516586..4516781,4517895..4518036,4522599..4522720,4539147..4539281,4541247..4541363,4552929..4553018,4553971..4554097,4555959..4556059,4561244..4561300,4563947..4564046,4572351..4572413,4578929..4579023,4601330..4601399))
location: region:4427922-4601399:-1
so has part: feature:4601330-4601399:-1:exon
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so has part: feature:4454275-4454403:-1:exon
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so has part: feature:4450831-4450962:-1:exon
so has part: feature:4446042-4446165:-1:exon
so has part: feature:4435311-4435513:-1:exon
so has part: feature:4432914-4433056:-1:exon
so has part: feature:4427922-4431707:-1:exon

position:4601399:-1
position: 4601399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4601330-4601399:-1:exon

position:4601330:-1
position: 4601330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4578929-4579023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4572351-4572413:-1:exon

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SIO_000300: 4
SIO_000628: feature:4563947-4564046:-1:exon

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SIO_000300: 5
SIO_000628: feature:4561244-4561300:-1:exon

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SIO_000300: 6
SIO_000628: feature:4555959-4556059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4553971-4554097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4552929-4553018:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4541247-4541363:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4539147-4539281:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4522599-4522720:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4517895-4518036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4516586-4516781:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4511519-4511638:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4508929-4509004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4499878-4500021:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4497489-4497528:-1:exon

urn:…
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SIO_000628: feature:4488775-4488897:-1:exon

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SIO_000628: feature:4486456-4486536:-1:exon

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urn:…
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urn:…
SIO_000300: 22
SIO_000628: feature:4483468-4483617:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4482549-4482853:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4480417-4482165:-1:exon

urn:…
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SIO_000628: feature:4476927-4477029:-1:exon

urn:…
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SIO_000628: feature:4475878-4476090:-1:exon

urn:…
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SIO_000628: feature:4466830-4466936:-1:exon

urn:…
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SIO_000628: feature:4465370-4465578:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4462346-4462575:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4461691-4461807:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4461168-4461356:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4460062-4460109:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4457850-4457961:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4457264-4457325:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4454855-4455047:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4454275-4454403:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4452442-4452547:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4450831-4450962:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:4446042-4446165:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:4435311-4435513:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:4432914-4433056:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:4427922-4431707:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X2
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAEGTIYCPVTARKNTSAAEVIETLIYKLQLEKTKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENCFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRRMMERGFLPQPPQKDYNDLCNLPDLNEKALLDNLRSRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHHLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEEEKKSFHLLEPEEYHYLNQMTKKLLRQTWDDYYYDSEPDSFSVEGEDLKHDFERLQLAMEMVGFLPKTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNAEVLPIVSELLEVKEETLFEALTTRKTVTVGEKLILPYRLSEAITVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYDGNNYIEFPAVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICSLIGIDPVAVFRWSILRSYFRAAVAFREAGKRYVEKKPGHDDAVPFTVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSNLQGANTINDKSPRDLHGTSWNGRTGVQTARLPSSHSLIDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLASLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYTFQEFVAHFHVLLPQDTISSQCSIGEFLRNMNLNMTSYQVGKTMIFMKEIERQRLQDMLHKEVLRRIVLLQSWFRAMIERRQFLQMKQAAVIIQNYWRKCKMKQKPICTDPSVLNEAATSIQAVWKGYRQRKMFLQMHDAAIVIQRCWHDYCKYRLAALCIQTHWRRYKEMRAYKAFRDSIIKIQAANRGFVVRRRFQALRRQKLKEMNKQLESEKTGILNKHTPDENFLEIIRTDLNKFGDELNEMCTSRENDSQQTHSECNNSVDLQGETSDFPNSMNVVQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDNVNSPSPQGTPDSESSRGSFEVPSCDDGQKRKQSLTVCDEPVSDSSLHTTQDYLSTSPKPNDHNLPTSLKLNGKNLSSSPPYTNTNHPSLISTSPRSSNKEFSFHFQRSNSEDQPPSPRLRDSPFSSLKPDYTLSTLLPNHDSLSSSTKPNDTIIISSDHYAAEGTIAGPKTEVGEGDNASLNQPLDGEFSKDELSGIVDNAATDPFPQVAILERLEQLNVQQAERQKQKRQQNEKEMMEQIRQQTEILEKQRKAFEKQEKDMFERQRGEALQKIEQCRQNDSPPLPFRSPRKQADRPQSCLTLHPERKWDSNINSDSLSISAAEPKMLNAPECFENDNTSSRPGVKDRPMSMFFEKKELQPSGQQEMNKLDGWTPKLSLEPREPVAGERSRQVKLQKGIANTREEATDGSAKDRTNVLFFLPKDKTTLSKFDKDSVNLEKSELSKEEQAFRERMVKTSLLKVTDVARPAHKKKARMARTRSDFLTRGSYAEWEGESEEDEYDDPSVEPPLSPDQPRPELRPKDSAGQACYSDSEMMQSTRNEDQRKLHKAQSQDELGKLDPVQESNIPDGRAPLKGRMRFWGNRKQGEKKLSREKLATQSELQELSMDQDIQGQLWRRELKPSDTSLSLSLTEGRDGAFKGHDPIPHNLTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQ…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(4431220..4431707,4432914..4433056,4435311..4435513,4446042..4446165,4450831..4450962,4452442..4452547,4454275..4454403,4454855..4455047,4457264..4457325,4457850..4457961,4460062..4460109,4461168..4461356,4461691..4461807,4462346..4462575,4465370..4465578,4466830..4466936,4475878..4476090,4476927..4477029,4480417..4482165,4482549..4482853,4483468..4483617,4484452..4484574,4485569..4485679,4486456..4486536,4488775..4488897,4497489..4497528,4499878..4500021,4508929..4509004,4511519..4511638,4516586..4516781,4517895..4518036,4522599..4522720,4539147..4539281,4541247..4541363,4552929..4553018,4553971..4554097,4555959..4556056,4561244..4561300,4563947..4564046,4572351..4572413,4578929..4579023,4666989..4667831))
location: region:4431220-4667831:-1
so has part: feature:4666989-4667831:-1:exon
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so has part: feature:4435311-4435513:-1:exon
so has part: feature:4432914-4433056:-1:exon
so has part: feature:4431220-4431707:-1:exon

XP_041034221.1
type: Protein
SIO_000068: ncbiprotein

position:4431220:-1
position: 4431220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4667831:-1
position: 4667831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4666989-4667831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4578929-4579023:-1:exon

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SIO_000300: 3
SIO_000628: feature:4572351-4572413:-1:exon

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SIO_000628: feature:4563947-4564046:-1:exon

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SIO_000300: 7
SIO_000628: feature:4553971-4554097:-1:exon

urn:…
SIO_000300: 8
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SIO_000628: feature:4541247-4541363:-1:exon

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SIO_000300: 10
SIO_000628: feature:4539147-4539281:-1:exon

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SIO_000628: feature:4522599-4522720:-1:exon

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SIO_000628: feature:4517895-4518036:-1:exon

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SIO_000628: feature:4516586-4516781:-1:exon

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SIO_000628: feature:4511519-4511638:-1:exon

urn:…
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SIO_000628: feature:4508929-4509004:-1:exon

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SIO_000628: feature:4499878-4500021:-1:exon

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urn:…
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SIO_000628: feature:4462346-4462575:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4461691-4461807:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4461168-4461356:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4460062-4460109:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4457850-4457961:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4457264-4457325:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4454855-4455047:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4454275-4454403:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4452442-4452547:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4450831-4450962:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:4446042-4446165:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:4435311-4435513:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:4432914-4433056:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:4431220-4431707:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X3
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAEGTIYCPVTARKNTSAAEVIETLIYKLQLEKTKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENCFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRRMMERGFLPQPPQKDYNDLCNLPDLNEKALLDNLRSRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHHLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEEEKKSFHLLEPEEYHYLNQMTKKLLRQTWDDYYYDSEPQDSFSVEGEDLKHDFERLQLAMEMVGFLPKTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNAEVLPIVSELLEVKEETLFEALTTRKTVTVGEKLILPYRLSEAITVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYDGNNYIEFPAVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICSLIGIDPVAVFRWSILRSYFRAAVAFREAGKRYVEKKPGITRKSPRTPLSNLQGANTINDKSPRDLHGTSWNGRTGVQTARLPSSHSLIDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLASLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYTFQEFVAHFHVLLPQDTISSQCSIGEFLRNMNLNMTSYQVGKTMIFMKEIERQRLQDMLHKEVLRRIVLLQSWFRAMIERRQFLQMKQAAVIIQNYWRKCKMKQKPICTDPSVLNEAATSIQAVWKGYRQRKMFLQMHDAAIVIQRCWHDYCKYRLAALCIQTHWRRYKEMRAYKAFRDSIIKIQAANRGFVVRRRFQALRRQKLKEMNKQLESEKTGILNKHTPDENFLEIIRTDLNKFGDELNEMCTSRENDSQQTHSECNNSVDLQGETSDFPNSMNVVQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDNVNSPSPQGTPDSESSRGSFEVPSCDDGQKRKQSLTVCDEPVSDSSLHTTQDYLSTSPKPNDHNLPTSLKLNGKNLSSSPPYTNTNHPSLISTSPRSSNKEFSFHFQRSNSEDQPPSPRLRDSPFSSLKPDYTLSTLLPNHDSLSSSTKPNDTIIISSDHYAAEGTIAGPKTEVGEGDNASLNQPLDGEFSKDELSGIVDNAATDPFPQVAILERLEQLNVQQAERQKQKRQQNEKEMMEQIRQQTEILEKQRKAFEKQEKDMFERQRGEALQKIEQCRQNDSPPLPFRSPRKQADRPQSCLTLHPERKWDSNINSDSLSISAAEPKMLNAPECFENDNTSSRPGVKDRPMSMFFEKKELQPSGQQEMNKLDGWTPKLSLEPREPVAGERSRQVKLQKGIANTREEATDGSAKDRTNVLFFLPKDKTTLSKFDKDSVNLEKSELSKEEQAFRERMVKTSLLKVTDVARPAHKKKARMARTRSDFLTRGSYAEWEGESEEDEYDDPSVEPPLSPDQPRPELRPKDSAGQACYSDSEMMQSTRNEDQRKLHKAQSQDELGKLDPVQESNIPDGRAPLKGRMRFWGNRKQGEKKLSREKLATQSELQELSMDQDIQGQLWRRELKPSDTSLSLSLTEGRDGAFKGHDPIPHNLTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQHDALQIITSANDFKCMNEFLQKKITDLDTDDSKKDTFVD…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(4431220..4431707,4432914..4433056,4435311..4435513,4446042..4446165,4450831..4450962,4452442..4452547,4454275..4454403,4454855..4455047,4457264..4457325,4457850..4457961,4460062..4460109,4461168..4461356,4461691..4461807,4462346..4462575,4465370..4465578,4466830..4466936,4475878..4476090,4476927..4477029,4480417..4482165,4482549..4482853,4483468..4483617,4484452..4484574,4485569..4485679,4486456..4486536,4488775..4488897,4497489..4497528,4499878..4500021,4508929..4509004,4516586..4516781,4517895..4518036,4522599..4522720,4539147..4539281,4541247..4541363,4552929..4553018,4553971..4554097,4555959..4556059,4561244..4561300,4563947..4564046,4572351..4572413,4578929..4579023,4666989..4667831))
location: region:4431220-4667831:-1
so has part: feature:4666989-4667831:-1:exon
so has part: feature:4578929-4579023:-1:exon
so has part: feature:4572351-4572413:-1:exon
so has part: feature:4563947-4564046:-1:exon
so has part: feature:4561244-4561300:-1:exon
so has part: feature:4555959-4556059:-1:exon
so has part: feature:4553971-4554097:-1:exon
so has part: feature:4552929-4553018:-1:exon
so has part: feature:4541247-4541363:-1:exon
so has part: feature:4539147-4539281:-1:exon
so has part: feature:4522599-4522720:-1:exon
so has part: feature:4517895-4518036:-1:exon
so has part: feature:4516586-4516781:-1:exon
so has part: feature:4508929-4509004:-1:exon
so has part: feature:4499878-4500021:-1:exon
so has part: feature:4497489-4497528:-1:exon
so has part: feature:4488775-4488897:-1:exon
so has part: feature:4486456-4486536:-1:exon
so has part: feature:4485569-4485679:-1:exon
so has part: feature:4484452-4484574:-1:exon
so has part: feature:4483468-4483617:-1:exon
so has part: feature:4482549-4482853:-1:exon
so has part: feature:4480417-4482165:-1:exon
so has part: feature:4476927-4477029:-1:exon
so has part: feature:4475878-4476090:-1:exon
so has part: feature:4466830-4466936:-1:exon
so has part: feature:4465370-4465578:-1:exon
so has part: feature:4462346-4462575:-1:exon
so has part: feature:4461691-4461807:-1:exon
so has part: feature:4461168-4461356:-1:exon
so has part: feature:4460062-4460109:-1:exon
so has part: feature:4457850-4457961:-1:exon
so has part: feature:4457264-4457325:-1:exon
so has part: feature:4454855-4455047:-1:exon
so has part: feature:4454275-4454403:-1:exon
so has part: feature:4452442-4452547:-1:exon
so has part: feature:4450831-4450962:-1:exon
so has part: feature:4446042-4446165:-1:exon
so has part: feature:4435311-4435513:-1:exon
so has part: feature:4432914-4433056:-1:exon
so has part: feature:4431220-4431707:-1:exon

XP_041034222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4666989-4667831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4578929-4579023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4572351-4572413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4563947-4564046:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4561244-4561300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4555959-4556059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4553971-4554097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4552929-4553018:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4541247-4541363:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4539147-4539281:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4522599-4522720:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4517895-4518036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4516586-4516781:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4508929-4509004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4499878-4500021:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4497489-4497528:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4488775-4488897:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4486456-4486536:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4485569-4485679:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4484452-4484574:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4483468-4483617:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4482549-4482853:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4480417-4482165:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4476927-4477029:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4475878-4476090:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4466830-4466936:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4465370-4465578:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4462346-4462575:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4461691-4461807:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4461168-4461356:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4460062-4460109:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4457850-4457961:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4457264-4457325:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4454855-4455047:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4454275-4454403:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4452442-4452547:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4450831-4450962:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4446042-4446165:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:4435311-4435513:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:4432914-4433056:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:4431220-4431707:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X4
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAEGTIYCPVTARKNTSAAEVIETLIYKLQLEKTKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENCFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRRMMERGFLPQPPQKDYNDLCNLPDLNEKALLDNLRSRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHHLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEEEKKSFHLLEPEEYHYLNQMTKKLLRQTWDDYYYDSEPQDSFSVEGEDLKHDFERLQLAMEMVGFLPKTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNAEVLPIVSELLEVKEETLFEALTTRKTVTVGEKLILPYRLSEAITVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYDGNNYIEFPAVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICSLIGIDPVAVFRWSILRSYFRAAVAFREAGKRYVEKKPGHDDAVPFTVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSNLQGANTINDKSPRDLHGTSWNGRTGVQTARLPSSHSLIDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLASLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYTFQEFVAHFHVLLPQDTISSQCSIGEFLRNMNLNMTSYQVGKTMIFMKEIERQRLQDMLHKEVLRRIVLLQSWFRAMIERRQFLQMKQAAVIIQNYWRKCKMKQKPICTDPSVLNEAATSIQAVWKGYRQRKMFLQMHDAAIVIQRCWHDYCKYRLAALCIQTHWRRYKEMRAYKAFRDSIIKIQAANRGFVVRRRFQALRRQKLKEMNKQLESEKTGILNKHTPDENFLEIIRTDLNKFGDELNEMCTSRENDSQQTHSECNNSVDLQGETSDFPNSMNVVQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDNVNSPSPQGTPDSESSRGSFEVPSCDDGQKRKQSLTVCDEPVSDSSLHTTQDYLSTSPKPNDHNLPTSLKLNGKNLSSSPPYTNTNHPSLISTSPRSSNKEFSFHFQRSNSEDQPPSPRLRDSPFSSLKPDYTLSTLLPNHDSLSSSTKPNDTIIISSDHYAAEGTIAGPKTEVGEGDNASLNQPLDGEFSKDELSGIVDNAATDPFPQVAILERLEQLNVQQAERQKQKRQQNEKEMMEQIRQQTEILEKQRKAFEKQEKDMFERQRGEALQKIEQCRQNDSPPLPFRSPRKQADRPQSCLTLHPERKWDSNINSDSLSISAAEPKMLNAPECFENDNTSSRPGVKDRPMSMFFEKKELQPSGQQEMNKLDGWTPKLSLEPREPVAGERSRQVKLQKGIANTREEATDGSAKDRTNVLFFLPKDKTTLSKFDKDSVNLEKSELSKEEQAFRERMVKTSLLKVTDMQSTRNEDQRKLHKAQSQDELGKLDPVQESNIPDGRAPLKGRMRFWGNRKQGEKKLSREKLATQSELQELSMDQDIQGQLWRRELKPSDTSLSLSLTEGRDGAFKGHDPIPHNLTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQHDALQIITSANDFKCMNEFLQKKITDLDTDDSKKDTFVDVVFKKSLKEFRLNIFNSYSAALAMDNGKSIR…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(4431220..4431707,4432914..4433056,4435311..4435513,4446042..4446165,4450831..4450962,4452442..4452547,4454275..4454403,4454855..4455047,4457264..4457325,4457850..4457961,4460062..4460109,4461168..4461356,4461691..4461807,4462346..4462575,4465370..4465578,4466830..4466936,4476927..4477029,4480417..4482165,4482549..4482853,4483468..4483617,4484452..4484574,4485569..4485679,4486456..4486536,4488775..4488897,4497489..4497528,4499878..4500021,4508929..4509004,4511519..4511638,4516586..4516781,4517895..4518036,4522599..4522720,4539147..4539281,4541247..4541363,4552929..4553018,4553971..4554097,4555959..4556059,4561244..4561300,4563947..4564046,4572351..4572413,4578929..4579023,4666989..4667831))
location: region:4431220-4667831:-1
so has part: feature:4666989-4667831:-1:exon
so has part: feature:4578929-4579023:-1:exon
so has part: feature:4572351-4572413:-1:exon
so has part: feature:4563947-4564046:-1:exon
so has part: feature:4561244-4561300:-1:exon
so has part: feature:4555959-4556059:-1:exon
so has part: feature:4553971-4554097:-1:exon
so has part: feature:4552929-4553018:-1:exon
so has part: feature:4541247-4541363:-1:exon
so has part: feature:4539147-4539281:-1:exon
so has part: feature:4522599-4522720:-1:exon
so has part: feature:4517895-4518036:-1:exon
so has part: feature:4516586-4516781:-1:exon
so has part: feature:4511519-4511638:-1:exon
so has part: feature:4508929-4509004:-1:exon
so has part: feature:4499878-4500021:-1:exon
so has part: feature:4497489-4497528:-1:exon
so has part: feature:4488775-4488897:-1:exon
so has part: feature:4486456-4486536:-1:exon
so has part: feature:4485569-4485679:-1:exon
so has part: feature:4484452-4484574:-1:exon
so has part: feature:4483468-4483617:-1:exon
so has part: feature:4482549-4482853:-1:exon
so has part: feature:4480417-4482165:-1:exon
so has part: feature:4476927-4477029:-1:exon
so has part: feature:4466830-4466936:-1:exon
so has part: feature:4465370-4465578:-1:exon
so has part: feature:4462346-4462575:-1:exon
so has part: feature:4461691-4461807:-1:exon
so has part: feature:4461168-4461356:-1:exon
so has part: feature:4460062-4460109:-1:exon
so has part: feature:4457850-4457961:-1:exon
so has part: feature:4457264-4457325:-1:exon
so has part: feature:4454855-4455047:-1:exon
so has part: feature:4454275-4454403:-1:exon
so has part: feature:4452442-4452547:-1:exon
so has part: feature:4450831-4450962:-1:exon
so has part: feature:4446042-4446165:-1:exon
so has part: feature:4435311-4435513:-1:exon
so has part: feature:4432914-4433056:-1:exon
so has part: feature:4431220-4431707:-1:exon

XP_041034223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4666989-4667831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4578929-4579023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4572351-4572413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4563947-4564046:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4561244-4561300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4555959-4556059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4553971-4554097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4552929-4553018:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4541247-4541363:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4539147-4539281:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4522599-4522720:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4517895-4518036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4516586-4516781:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4511519-4511638:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4508929-4509004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4499878-4500021:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4497489-4497528:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4488775-4488897:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4486456-4486536:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4485569-4485679:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4484452-4484574:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4483468-4483617:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4482549-4482853:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4480417-4482165:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4476927-4477029:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4466830-4466936:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4465370-4465578:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4462346-4462575:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4461691-4461807:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4461168-4461356:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4460062-4460109:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4457850-4457961:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4457264-4457325:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4454855-4455047:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4454275-4454403:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4452442-4452547:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4450831-4450962:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4446042-4446165:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:4435311-4435513:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:4432914-4433056:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:4431220-4431707:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X1
translation: MNVHDVGGRRRYEDNEFTLRVYPGNIAEGTIYCPVTARKNTSAAEVIETLIYKLQLEKTKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRSALENCFSSEDYRFLLREKNLDGSIHYNNLQSWLRVTEERRRMMERGFLPQPPQKDYNDLCNLPDLNEKALLDNLRSRFKQEKIYTYVGTILIAINPFKFLPIYNPKYVKMYDNHHLGKLEPHIYAIADVAYHAMLQRKKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEEEKKSFHLLEPEEYHYLNQMTKKLLRQTWDDYYYDSEPQDSFSVEGEDLKHDFERLQLAMEMVGFLPKTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNAEVLPIVSELLEVKEETLFEALTTRKTVTVGEKLILPYRLSEAITVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYDGNNYIEFPAVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICSLIGIDPVAVFRWSILRSYFRAAVAFREAGKRYVEKKPGHDDAVPFTVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSNLQGANTINDKSPRDLHGTSWNGRTGVQTARLPSSHSLIDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLASLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYTFQEFVAHFHVLLPQDTISSQCSIGEFLRNMNLNMTSYQVGKTMIFMKEIERQRLQDMLHKEVLRRIVLLQSWFRAMIERRQFLQMKQAAVIIQNYWRKCKMKQKPICTDPSVLNEAATSIQAVWKGYRQRKMFLQMHDAAIVIQRCWHDYCKYRLAALCIQTHWRRYKEMRAYKAFRDSIIKIQAANRGFVVRRRFQALRRQKLKEMNKQLESEKTGILNKHTPDENFLEIIRTDLNKFGDELNEMCTSRENDSQQTHSECNNSVDLQGETSDFPNSMNVVQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDNVNSPSPQGTPDSESSRGSFEVPSCDDGQKRKQSLTVCDEPVSDSSLHTTQDYLSTSPKPNDHNLPTSLKLNGKNLSSSPPYTNTNHPSLISTSPRSSNKEFSFHFQRSNSEDQPPSPRLRDSPFSSLKPDYTLSTLLPNHDSLSSSTKPNDTIIISSDHYAAEGTIAGPKTEVGEGDNASLNQPLDGEFSKDELSGIVDNAATDPFPQVAILERLEQLNVQQAERQKQKRQQNEKEMMEQIRQQTEILEKQRKAFEKQEKDMFERQRGEALQKIEQCRQNDSPPLPFRSPRKQADRPQSCLTLHPERKWDSNINSDSLSISAAEPKMLNAPECFENDNTSSRPGVKDRPMSMFFEKKELQPSGQQEMNKLDGWTPKLSLEPREPVAGERSRQVKLQKGIANTREEATDGSAKDRTNVLFFLPKDKTTLSKFDKDSVNLEKSELSKEEQAFRERMVKTSLLKVTDVARPAHKKKARMARTRSDFLTRGSYAEWEGESEEDEYDDPSVEPPLSPDQPRPELRPKDSAGQACYSDSEMMQSTRNEDQRKLHKAQSQDELGKLDPVQESNIPDGRAPLKGRMRFWGNRKQGEKKLSREKLATQSELQELSMDQDIQGQLWRRELKPSDTSLSLSLTEGRDGAFKGHDPIPHNLTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQW…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(4431220..4431707,4432914..4433056,4435311..4435513,4446042..4446165,4450831..4450962,4452442..4452547,4454275..4454403,4454855..4455047,4457264..4457325,4457850..4457961,4460062..4460109,4461168..4461356,4461691..4461807,4462346..4462575,4465370..4465578,4466830..4466936,4475878..4476090,4476927..4477029,4480417..4482165,4482549..4482853,4483468..4483617,4484452..4484574,4485569..4485679,4486456..4486536,4488775..4488897,4497489..4497528,4499878..4500021,4508929..4509004,4511519..4511638,4516586..4516781,4517895..4518036,4522599..4522720,4539147..4539281,4541247..4541363,4552929..4553018,4553971..4554097,4555959..4556059,4561244..4561300,4563947..4564046,4572351..4572413,4578929..4579023,4666989..4667831))
location: region:4431220-4667831:-1
so has part: feature:4666989-4667831:-1:exon
so has part: feature:4578929-4579023:-1:exon
so has part: feature:4572351-4572413:-1:exon
so has part: feature:4563947-4564046:-1:exon
so has part: feature:4561244-4561300:-1:exon
so has part: feature:4555959-4556059:-1:exon
so has part: feature:4553971-4554097:-1:exon
so has part: feature:4552929-4553018:-1:exon
so has part: feature:4541247-4541363:-1:exon
so has part: feature:4539147-4539281:-1:exon
so has part: feature:4522599-4522720:-1:exon
so has part: feature:4517895-4518036:-1:exon
so has part: feature:4516586-4516781:-1:exon
so has part: feature:4511519-4511638:-1:exon
so has part: feature:4508929-4509004:-1:exon
so has part: feature:4499878-4500021:-1:exon
so has part: feature:4497489-4497528:-1:exon
so has part: feature:4488775-4488897:-1:exon
so has part: feature:4486456-4486536:-1:exon
so has part: feature:4485569-4485679:-1:exon
so has part: feature:4484452-4484574:-1:exon
so has part: feature:4483468-4483617:-1:exon
so has part: feature:4482549-4482853:-1:exon
so has part: feature:4480417-4482165:-1:exon
so has part: feature:4476927-4477029:-1:exon
so has part: feature:4475878-4476090:-1:exon
so has part: feature:4466830-4466936:-1:exon
so has part: feature:4465370-4465578:-1:exon
so has part: feature:4462346-4462575:-1:exon
so has part: feature:4461691-4461807:-1:exon
so has part: feature:4461168-4461356:-1:exon
so has part: feature:4460062-4460109:-1:exon
so has part: feature:4457850-4457961:-1:exon
so has part: feature:4457264-4457325:-1:exon
so has part: feature:4454855-4455047:-1:exon
so has part: feature:4454275-4454403:-1:exon
so has part: feature:4452442-4452547:-1:exon
so has part: feature:4450831-4450962:-1:exon
so has part: feature:4446042-4446165:-1:exon
so has part: feature:4435311-4435513:-1:exon
so has part: feature:4432914-4433056:-1:exon
so has part: feature:4431220-4431707:-1:exon

XP_041034219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4666989-4667831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4578929-4579023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4572351-4572413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4563947-4564046:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4561244-4561300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4555959-4556059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4553971-4554097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4552929-4553018:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4541247-4541363:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4539147-4539281:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4522599-4522720:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4517895-4518036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4516586-4516781:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4511519-4511638:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4508929-4509004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4499878-4500021:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4497489-4497528:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4488775-4488897:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4486456-4486536:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4485569-4485679:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4484452-4484574:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4483468-4483617:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4482549-4482853:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4480417-4482165:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4476927-4477029:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4475878-4476090:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4466830-4466936:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4465370-4465578:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4462346-4462575:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4461691-4461807:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4461168-4461356:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4460062-4460109:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4457850-4457961:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4457264-4457325:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4454855-4455047:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4454275-4454403:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4452442-4452547:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4450831-4450962:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:4446042-4446165:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:4435311-4435513:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:4432914-4433056:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:4431220-4431707:-1:exon

myo9aa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: myo9aa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-IXAa isoform X5
translation: MFLRSNIRLLCAARKTQYNAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGANEEEKKSFHLLEPEEYHYLNQMTKKLLRQTWDDYYYDSEPQDSFSVEGEDLKHDFERLQLAMEMVGFLPKTRKRIFSLLSAILHLGNIKYKKKTYRDDSVDICNAEVLPIVSELLEVKEETLFEALTTRKTVTVGEKLILPYRLSEAITVRDSMAKSLYSALFDWIVFRINHALLNNRDLEEHKKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKMEQEEYRSEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEECNFPQATNQTLLDKFKRQYDGNNYIEFPAVMEQAFIIKHYAGKVKYQMKDFREKNTDHMRPDIVALLKSSKNAFICSLIGIDPVAVFRWSILRSYFRAAVAFREAGKRYVEKKPGHDDAVPFTVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSNLQGANTINDKSPRDLHGTSWNGRTGVQTARLPSSHSLIDDEGIFLNSASTKLLERAHGILMRNRNSKTKPVLPKHLLDVKSLKYLASLTLHDRITKSLLHLHKKKKTPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFNDHLVLRQLRYTGMLETVRIRQSGYSIKYTFQEFVAHFHVLLPQDTISSQCSIGEFLRNMNLNMTSYQVGKTMIFMKEIERQRLQDMLHKEVLRRIVLLQSWFRAMIERRQFLQMKQAAVIIQNYWRKCKMKQKPICTDPSVLNEAATSIQAVWKGYRQRKMFLQMHDAAIVIQRCWHDYCKYRLAALCIQTHWRRYKEMRAYKAFRDSIIKIQAANRGFVVRRRFQALRRQKLKEMNKQLESEKTGILNKHTPDENFLEIIRTDLNKFGDELNEMCTSRENDSQQTHSECNNSVDLQGETSDFPNSMNVVQGVIVRERPKSLSGDPDKQKVVRAKRHSRRMRELEQAKFSLELLKVRSGGVSPSEEGRWSTELVSDNVNSPSPQGTPDSESSRGSFEVPSCDDGQKRKQSLTVCDEPVSDSSLHTTQDYLSTSPKPNDHNLPTSLKLNGKNLSSSPPYTNTNHPSLISTSPRSSNKEFSFHFQRSNSEDQPPSPRLRDSPFSSLKPDYTLSTLLPNHDSLSSSTKPNDTIIISSDHYAAEGTIAGPKTEVGEGDNASLNQPLDGEFSKDELSGIVDNAATDPFPQVAILERLEQLNVQQAERQKQKRQQNEKEMMEQIRQQTEILEKQRKAFEKQEKDMFERQRGEALQKIEQCRQNDSPPLPFRSPRKQADRPQSCLTLHPERKWDSNINSDSLSISAAEPKMLNAPECFENDNTSSRPGVKDRPMSMFFEKKELQPSGQQEMNKLDGWTPKLSLEPREPVAGERSRQVKLQKGIANTREEATDGSAKDRTNVLFFLPKDKTTLSKFDKDSVNLEKSELSKEEQAFRERMVKTSLLKVTDVARPAHKKKARMARTRSDFLTRGSYAEWEGESEEDEYDDPSVEPPLSPDQPRPELRPKDSAGQACYSDSEMMQSTRNEDQRKLHKAQSQDELGKLDPVQESNIPDGRAPLKGRMRFWGNRKQGEKKLSREKLATQSELQELSMDQDIQGQLWRRELKPSDTSLSLSLTEGRDGAFKGHDPIPHNLTPPRSPDLGLERGKEFKENKEPSPKVKRRRSVKISNVGLEPIQWQHDALQIITSANDFKCMNEFLQKKITDLDTDDSKKDTFVDVVFKKSLKEFRLNIFNSYSAALAMDNGKSIRYKDLYALFEQILEKTMRQEQRDWNESPVKVWVNTFKVFLDEFMIEYKIQESNTGKVQKIERKKRRKKETDIVEEYNGHIFKSTQYSIPTYCECCSSLIWMMDRACVCKLCRYACHRKCCLKTTIKCSKKYDPELSSRQFGVEVSRLTNDERSVPLVVEKLINYIEMHGLYTEGIYRKSGSTNKIKELKQGL…
SIO_010081: myo9aa
subclass of: SO_0000673
so part of: myo9aa
location: complement(join(4431220..4431707,4432914..4433056,4435311..4435513,4446042..4446165,4450831..4450962,4452442..4452547,4454275..4454403,4454855..4455047,4457264..4457325,4457850..4457961,4460062..4460109,4461168..4461356,4461691..4461807,4462346..4462575,4465370..4465578,4466830..4466936,4475878..4476090,4476927..4477029,4480417..4482165,4482549..4482853,4483468..4483617,4484452..4484574,4485569..4485679,4486456..4486536,4488775..4488897,4497489..4497528,4499878..4500021,4508929..4509004,4511519..4511638,4516586..4516781,4517895..4518036,4522599..4522720,4539147..4539281,4541247..4541363,4552929..4553018,4553971..4554097,4555959..4556059,4561244..4561300,4563947..4564046,4572351..4572413,4578929..4579023,4601330..4601386))
location: region:4431220-4601386:-1
so has part: feature:4601330-4601386:-1:exon
so has part: feature:4578929-4579023:-1:exon
so has part: feature:4572351-4572413:-1:exon
so has part: feature:4563947-4564046:-1:exon
so has part: feature:4561244-4561300:-1:exon
so has part: feature:4555959-4556059:-1:exon
so has part: feature:4553971-4554097:-1:exon
so has part: feature:4552929-4553018:-1:exon
so has part: feature:4541247-4541363:-1:exon
so has part: feature:4539147-4539281:-1:exon
so has part: feature:4522599-4522720:-1:exon
so has part: feature:4517895-4518036:-1:exon
so has part: feature:4516586-4516781:-1:exon
so has part: feature:4511519-4511638:-1:exon
so has part: feature:4508929-4509004:-1:exon
so has part: feature:4499878-4500021:-1:exon
so has part: feature:4497489-4497528:-1:exon
so has part: feature:4488775-4488897:-1:exon
so has part: feature:4486456-4486536:-1:exon
so has part: feature:4485569-4485679:-1:exon
so has part: feature:4484452-4484574:-1:exon
so has part: feature:4483468-4483617:-1:exon
so has part: feature:4482549-4482853:-1:exon
so has part: feature:4480417-4482165:-1:exon
so has part: feature:4476927-4477029:-1:exon
so has part: feature:4475878-4476090:-1:exon
so has part: feature:4466830-4466936:-1:exon
so has part: feature:4465370-4465578:-1:exon
so has part: feature:4462346-4462575:-1:exon
so has part: feature:4461691-4461807:-1:exon
so has part: feature:4461168-4461356:-1:exon
so has part: feature:4460062-4460109:-1:exon
so has part: feature:4457850-4457961:-1:exon
so has part: feature:4457264-4457325:-1:exon
so has part: feature:4454855-4455047:-1:exon
so has part: feature:4454275-4454403:-1:exon
so has part: feature:4452442-4452547:-1:exon
so has part: feature:4450831-4450962:-1:exon
so has part: feature:4446042-4446165:-1:exon
so has part: feature:4435311-4435513:-1:exon
so has part: feature:4432914-4433056:-1:exon
so has part: feature:4431220-4431707:-1:exon

XP_041034224.1
type: Protein
SIO_000068: ncbiprotein

position:4601386:-1
position: 4601386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4601330-4601386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4578929-4579023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4572351-4572413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4563947-4564046:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4561244-4561300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4555959-4556059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4553971-4554097:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4552929-4553018:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4541247-4541363:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4539147-4539281:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4522599-4522720:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4517895-4518036:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4516586-4516781:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4511519-4511638:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4508929-4509004:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4499878-4500021:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4497489-4497528:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4488775-4488897:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4486456-4486536:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4485569-4485679:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4484452-4484574:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4483468-4483617:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4482549-4482853:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4480417-4482165:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4476927-4477029:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4475878-4476090:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4466830-4466936:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4465370-4465578:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4462346-4462575:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4461691-4461807:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4461168-4461356:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4460062-4460109:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4457850-4457961:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4457264-4457325:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4454855-4455047:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4454275-4454403:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4452442-4452547:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4450831-4450962:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:4446042-4446165:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:4435311-4435513:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:4432914-4433056:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:4431220-4431707:-1:exon

senp8
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: senp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4717996..4723115
location: region:4717996-4723115:1
so has part: feature:4717996-4723115:1:exon
subclass of: SO_0000010

121272064
type: Gene
SIO_000068: ncbigene

position:4717996:1
position: 4717996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4723115:1
position: 4723115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4717996-4723115:1:exon

senp8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: senp8
product: SUMO peptidase family member, NEDD8 specific, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178480.1
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: join(4717996..4718102,4720351..4723115)
location: region:4717996-4723115:1
so has part: feature:4717996-4718102:1:exon
so has part: feature:4720351-4723115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4717996-4718102:1:exon

position:4718102:1
position: 4718102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4720351-4723115:1:exon

position:4720351:1
position: 4720351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

senp8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: senp8
product: SUMO peptidase family member, NEDD8 specific, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178483.1
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: join(4718015..4718117,4720351..4723115)
location: region:4718015-4723115:1
so has part: feature:4718015-4718117:1:exon
so has part: feature:4720351-4723115:1:exon

position:4718015:1
position: 4718015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4718015-4718117:1:exon

position:4718117:1
position: 4718117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4720351-4723115:1:exon

senp8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: senp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 8 isoform X1
translation: MAAPAVRNSMDPVILSYHDSLIRRSDLSLLNPPNWLNDHIIAFAFEYFATEQYKELLGSACFISPEVTQFIKCMASQQELAIFLEPLALAEKSLVFLAVNDNSVQAAGGSHWSLLFYNRDGNCFSHYDSCSNMNASHARQIAKKLQHFLGTKSEVPFVEEPAPVQKNSYDCGMYVMCNTEALCEQYLRRDRRPPMMVVTPTYITQKRANWKKLIEQLSKK
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: join(4718083..4718102,4720351..4720993)
location: region:4718083-4720993:1
so has part: feature:4718083-4718102:1:exon
so has part: feature:4720351-4720993:1:exon

XP_041034414.1
type: Protein
SIO_000068: ncbiprotein

position:4718083:1
position: 4718083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4720993:1
position: 4720993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4718083-4718102:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4720351-4720993:1:exon

senp8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: senp8
product: SUMO peptidase family member, NEDD8 specific, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041178482.1
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: join(4718098..4718265,4720351..4723115)
location: region:4718098-4723115:1
so has part: feature:4718098-4718265:1:exon
so has part: feature:4720351-4723115:1:exon

position:4718098:1
position: 4718098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4718098-4718265:1:exon

position:4718265:1
position: 4718265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4720351-4723115:1:exon

senp8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: senp8
product: SUMO peptidase family member, NEDD8 specific, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178481.1
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: join(4718130..4718188,4720351..4723115)
location: region:4718130-4723115:1
so has part: feature:4718130-4718188:1:exon
so has part: feature:4720351-4723115:1:exon

position:4718130:1
position: 4718130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4718130-4718188:1:exon

position:4718188:1
position: 4718188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4720351-4723115:1:exon

senp8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: senp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 8 isoform X2
translation: MDGELGNSMDPVILSYHDSLIRRSDLSLLNPPNWLNDHIIAFAFEYFATEQYKELLGSACFISPEVTQFIKCMASQQELAIFLEPLALAEKSLVFLAVNDNSVQAAGGSHWSLLFYNRDGNCFSHYDSCSNMNASHARQIAKKLQHFLGTKSEVPFVEEPAPVQKNSYDCGMYVMCNTEALCEQYLRRDRRPPMMVVTPTYITQKRANWKKLIEQLSKK
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: join(4718172..4718188,4720351..4720993)
location: region:4718172-4720993:1
so has part: feature:4718172-4718188:1:exon
so has part: feature:4720351-4720993:1:exon

XP_041034415.1
type: Protein
SIO_000068: ncbiprotein

position:4718172:1
position: 4718172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4718172-4718188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4720351-4720993:1:exon

senp8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: senp8
product: SUMO peptidase family member, NEDD8 specific, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178484.1
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: join(4718907..4718975,4720351..4723115)
location: region:4718907-4723115:1
so has part: feature:4718907-4718975:1:exon
so has part: feature:4720351-4723115:1:exon

position:4718907:1
position: 4718907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4718907-4718975:1:exon

position:4718975:1
position: 4718975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4720351-4723115:1:exon

senp8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: senp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 8 isoform X3
translation: MDPVILSYHDSLIRRSDLSLLNPPNWLNDHIIAFAFEYFATEQYKELLGSACFISPEVTQFIKCMASQQELAIFLEPLALAEKSLVFLAVNDNSVQAAGGSHWSLLFYNRDGNCFSHYDSCSNMNASHARQIAKKLQHFLGTKSEVPFVEEPAPVQKNSYDCGMYVMCNTEALCEQYLRRDRRPPMMVVTPTYITQKRANWKKLIEQLSKK
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: 4720358..4720993
location: region:4720358-4720993:1
so has part: feature:4720358-4720993:1:exon

XP_041034416.1
type: Protein
SIO_000068: ncbiprotein

position:4720358:1
position: 4720358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4720358-4720993:1:exon

senp8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: senp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 8 isoform X3
translation: MDPVILSYHDSLIRRSDLSLLNPPNWLNDHIIAFAFEYFATEQYKELLGSACFISPEVTQFIKCMASQQELAIFLEPLALAEKSLVFLAVNDNSVQAAGGSHWSLLFYNRDGNCFSHYDSCSNMNASHARQIAKKLQHFLGTKSEVPFVEEPAPVQKNSYDCGMYVMCNTEALCEQYLRRDRRPPMMVVTPTYITQKRANWKKLIEQLSKK
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: 4720358..4720993
location: region:4720358-4720993:1
so has part: feature:4720358-4720993:1:exon

XP_041034417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4720358-4720993:1:exon

senp8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: senp8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 8 isoform X3
translation: MDPVILSYHDSLIRRSDLSLLNPPNWLNDHIIAFAFEYFATEQYKELLGSACFISPEVTQFIKCMASQQELAIFLEPLALAEKSLVFLAVNDNSVQAAGGSHWSLLFYNRDGNCFSHYDSCSNMNASHARQIAKKLQHFLGTKSEVPFVEEPAPVQKNSYDCGMYVMCNTEALCEQYLRRDRRPPMMVVTPTYITQKRANWKKLIEQLSKK
SIO_010081: senp8
subclass of: SO_0000673
so part of: senp8
location: 4720358..4720993
location: region:4720358-4720993:1
so has part: feature:4720358-4720993:1:exon

XP_041034418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4720358-4720993:1:exon

iqgap1
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: iqgap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4730620..4853544
location: region:4730620-4853544:1
so has part: feature:4730620-4853544:1:exon
subclass of: SO_0000010

121272005
type: Gene
SIO_000068: ncbigene

position:4730620:1
position: 4730620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4853544:1
position: 4853544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4730620-4853544:1:exon

iqgap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: iqgap1
product: IQ motif containing GTPase activating protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041178356.1
SIO_010081: iqgap1
subclass of: SO_0000673
so part of: iqgap1
location: join(4730620..4730788,4740146..4740245,4778590..4778746,4779367..4779444,4781502..4781578,4783624..4783691,4786390..4786503,4787398..4787576,4788553..4788643,4791137..4791300,4791762..4791843,4793114..4793277,4794593..4794753,4796500..4796624,4799389..4799552,4816220..4816310,4817075..4817242,4818291..4818433,4819255..4819425,4819526..4819609,4821040..4821111,4823244..4823313,4823796..4824004,4824620..4824775,4826643..4826806,4827236..4827460,4830035..4830175,4832449..4832533,4834675..4834910,4836492..4836624,4838470..4838572,4839302..4839431,4841116..4841203,4841508..4841720,4845302..4845468,4846768..4846890,4849204..4849312,4851376..4853544)
location: region:4730620-4853544:1
so has part: feature:4730620-4730788:1:exon
so has part: feature:4740146-4740245:1:exon
so has part: feature:4778590-4778746:1:exon
so has part: feature:4779367-4779444:1:exon
so has part: feature:4781502-4781578:1:exon
so has part: feature:4783624-4783691:1:exon
so has part: feature:4786390-4786503:1:exon
so has part: feature:4787398-4787576:1:exon
so has part: feature:4788553-4788643:1:exon
so has part: feature:4791137-4791300:1:exon
so has part: feature:4791762-4791843:1:exon
so has part: feature:4793114-4793277:1:exon
so has part: feature:4794593-4794753:1:exon
so has part: feature:4796500-4796624:1:exon
so has part: feature:4799389-4799552:1:exon
so has part: feature:4816220-4816310:1:exon
so has part: feature:4817075-4817242:1:exon
so has part: feature:4818291-4818433:1:exon
so has part: feature:4819255-4819425:1:exon
so has part: feature:4819526-4819609:1:exon
so has part: feature:4821040-4821111:1:exon
so has part: feature:4823244-4823313:1:exon
so has part: feature:4823796-4824004:1:exon
so has part: feature:4824620-4824775:1:exon
so has part: feature:4826643-4826806:1:exon
so has part: feature:4827236-4827460:1:exon
so has part: feature:4830035-4830175:1:exon
so has part: feature:4832449-4832533:1:exon
so has part: feature:4834675-4834910:1:exon
so has part: feature:4836492-4836624:1:exon
so has part: feature:4838470-4838572:1:exon
so has part: feature:4839302-4839431:1:exon
so has part: feature:4841116-4841203:1:exon
so has part: feature:4841508-4841720:1:exon
so has part: feature:4845302-4845468:1:exon
so has part: feature:4846768-4846890:1:exon
so has part: feature:4849204-4849312:1:exon
so has part: feature:4851376-4853544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4730620-4730788:1:exon

position:4730788:1
position: 4730788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4740146-4740245:1:exon

position:4740146:1
position: 4740146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4740245:1
position: 4740245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4778590-4778746:1:exon

position:4778590:1
position: 4778590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4778746:1
position: 4778746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4779367-4779444:1:exon

position:4779367:1
position: 4779367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4779444:1
position: 4779444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4781502-4781578:1:exon

position:4781502:1
position: 4781502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4781578:1
position: 4781578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4783624-4783691:1:exon

position:4783624:1
position: 4783624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4783691:1
position: 4783691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4786390-4786503:1:exon

position:4786390:1
position: 4786390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4786503:1
position: 4786503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4787398-4787576:1:exon

position:4787398:1
position: 4787398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4787576:1
position: 4787576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4788553-4788643:1:exon

position:4788553:1
position: 4788553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4788643:1
position: 4788643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4791137-4791300:1:exon

position:4791137:1
position: 4791137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4791300:1
position: 4791300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4791762-4791843:1:exon

position:4791762:1
position: 4791762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4791843:1
position: 4791843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4793114-4793277:1:exon

position:4793114:1
position: 4793114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4793277:1
position: 4793277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4794593-4794753:1:exon

position:4794593:1
position: 4794593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4794753:1
position: 4794753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4796500-4796624:1:exon

position:4796500:1
position: 4796500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4796624:1
position: 4796624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4799389-4799552:1:exon

position:4799389:1
position: 4799389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4799552:1
position: 4799552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4816220-4816310:1:exon

position:4816220:1
position: 4816220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4816310:1
position: 4816310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4817075-4817242:1:exon

position:4817075:1
position: 4817075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4817242:1
position: 4817242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4818291-4818433:1:exon

position:4818291:1
position: 4818291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4818433:1
position: 4818433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4819255-4819425:1:exon

position:4819255:1
position: 4819255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4819425:1
position: 4819425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4819526-4819609:1:exon

position:4819526:1
position: 4819526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4819609:1
position: 4819609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4821040-4821111:1:exon

position:4821040:1
position: 4821040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4821111:1
position: 4821111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4823244-4823313:1:exon

position:4823244:1
position: 4823244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4823313:1
position: 4823313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4823796-4824004:1:exon

position:4823796:1
position: 4823796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4824004:1
position: 4824004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4824620-4824775:1:exon

position:4824620:1
position: 4824620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4824775:1
position: 4824775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4826643-4826806:1:exon

position:4826643:1
position: 4826643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4826806:1
position: 4826806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4827236-4827460:1:exon

position:4827236:1
position: 4827236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4827460:1
position: 4827460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4830035-4830175:1:exon

position:4830035:1
position: 4830035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4830175:1
position: 4830175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4832449-4832533:1:exon

position:4832449:1
position: 4832449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4832533:1
position: 4832533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:4834675-4834910:1:exon

position:4834675:1
position: 4834675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4834910:1
position: 4834910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:4836492-4836624:1:exon

position:4836492:1
position: 4836492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4836624:1
position: 4836624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:4838470-4838572:1:exon

position:4838470:1
position: 4838470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4838572:1
position: 4838572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:4839302-4839431:1:exon

position:4839302:1
position: 4839302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4839431:1
position: 4839431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:4841116-4841203:1:exon

position:4841116:1
position: 4841116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4841203:1
position: 4841203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:4841508-4841720:1:exon

position:4841508:1
position: 4841508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4841720:1
position: 4841720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:4845302-4845468:1:exon

position:4845302:1
position: 4845302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4845468:1
position: 4845468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:4846768-4846890:1:exon

position:4846768:1
position: 4846768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4846890:1
position: 4846890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:4849204-4849312:1:exon

position:4849204:1
position: 4849204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4849312:1
position: 4849312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:4851376-4853544:1:exon

position:4851376:1
position: 4851376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

iqgap1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: iqgap1
product: IQ motif containing GTPase activating protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041178355.1
SIO_010081: iqgap1
subclass of: SO_0000673
so part of: iqgap1
location: join(4730621..4730788,4740146..4740245,4778590..4778746,4779367..4779444,4781502..4781578,4783624..4783691,4786390..4786503,4787398..4787576,4788553..4788643,4791137..4791300,4791756..4791843,4793114..4793277,4794593..4794753,4796500..4796624,4799389..4799552,4816220..4816310,4817075..4817242,4818291..4818433,4819255..4819425,4819526..4819609,4821040..4821111,4823244..4823313,4823796..4824004,4824620..4824775,4826643..4826806,4827236..4827460,4830035..4830175,4832449..4832533,4834675..4834910,4836492..4836624,4838470..4838572,4839302..4839431,4841116..4841203,4841508..4841720,4845302..4845468,4846768..4846890,4849204..4849312,4851376..4853544)
location: region:4730621-4853544:1
so has part: feature:4730621-4730788:1:exon
so has part: feature:4740146-4740245:1:exon
so has part: feature:4778590-4778746:1:exon
so has part: feature:4779367-4779444:1:exon
so has part: feature:4781502-4781578:1:exon
so has part: feature:4783624-4783691:1:exon
so has part: feature:4786390-4786503:1:exon
so has part: feature:4787398-4787576:1:exon
so has part: feature:4788553-4788643:1:exon
so has part: feature:4791137-4791300:1:exon
so has part: feature:4791756-4791843:1:exon
so has part: feature:4793114-4793277:1:exon
so has part: feature:4794593-4794753:1:exon
so has part: feature:4796500-4796624:1:exon
so has part: feature:4799389-4799552:1:exon
so has part: feature:4816220-4816310:1:exon
so has part: feature:4817075-4817242:1:exon
so has part: feature:4818291-4818433:1:exon
so has part: feature:4819255-4819425:1:exon
so has part: feature:4819526-4819609:1:exon
so has part: feature:4821040-4821111:1:exon
so has part: feature:4823244-4823313:1:exon
so has part: feature:4823796-4824004:1:exon
so has part: feature:4824620-4824775:1:exon
so has part: feature:4826643-4826806:1:exon
so has part: feature:4827236-4827460:1:exon
so has part: feature:4830035-4830175:1:exon
so has part: feature:4832449-4832533:1:exon
so has part: feature:4834675-4834910:1:exon
so has part: feature:4836492-4836624:1:exon
so has part: feature:4838470-4838572:1:exon
so has part: feature:4839302-4839431:1:exon
so has part: feature:4841116-4841203:1:exon
so has part: feature:4841508-4841720:1:exon
so has part: feature:4845302-4845468:1:exon
so has part: feature:4846768-4846890:1:exon
so has part: feature:4849204-4849312:1:exon
so has part: feature:4851376-4853544:1:exon

position:4730621:1
position: 4730621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4730621-4730788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4740146-4740245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4778590-4778746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4779367-4779444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4781502-4781578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4783624-4783691:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4786390-4786503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4787398-4787576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4788553-4788643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4791137-4791300:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4791756-4791843:1:exon

position:4791756:1
position: 4791756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4793114-4793277:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4794593-4794753:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4796500-4796624:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4799389-4799552:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4816220-4816310:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4817075-4817242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4818291-4818433:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4819255-4819425:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4819526-4819609:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4821040-4821111:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4823244-4823313:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4823796-4824004:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4824620-4824775:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4826643-4826806:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4827236-4827460:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4830035-4830175:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4832449-4832533:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4834675-4834910:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4836492-4836624:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4838470-4838572:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4839302-4839431:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4841116-4841203:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4841508-4841720:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4845302-4845468:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4846768-4846890:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4849204-4849312:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4851376-4853544:1:exon

iqgap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: iqgap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP1 isoform X1
translation: MSTSDEVDGAGAVRPHYGSVLDNERLTAEEMDERRRQNIAYEYLCHLEEAKRWMEACLDEELPPTTELEEGLRNGVYLAKLGNFFSPKVVSRKKIYDCEQTRYKATGLHFRHTDNTIQWFNAMSNIGLPKIFYPETTDVYDRKNMPRCIYCIHALSLYLFKLGLAPQIQDLYGKVAFTEEEINNMKTELEKYGIQMPAFSKIGGILANELSVDEAALHAAVIAINDAIEKGVPAETLAAMKNPNAMLVNLNPTQSVQYQNTLSAAKQEKTANARNKDMPGSPQEERDVYEELLTQAEIQGNVNKVNLQNSLMSIDGALGQGDGIALYNALKSPALGLREVELDNCDWYLKQLSSDKQLKAQEQGSHEPLTKEELQFGVDQANRDAHRFKKMLEAVSRINAAIRKGVAEETVTELMNRDAQLPEVHPYAAELYQQELSTLQQQSHQGNLTHAELAVAVEMLSSVALINRALDAGDVNGVWKQIQNSVTGLTNVDDGNGQRYVDELMRLKAKARAEGNEFLTWNDIQGSVDQVNLVVQEEHDRIKAIGLINEAVDEGDPQKTLKALLLPSAKLADVSSPVAEHYQETLIRTKREKAQETQDDSAVLWLDEIQDTIWKSNKDTQDADKFSLGILAINEAVDSGDTARILGALRSADVGLYGVTSECDDIYQQELTEAKRAKKLEGDNGSQWVRHWVKGGYHYYYNLVTKQGSWEQPSGFVQNNTQLSKEEIQSTISGVTAAYNREQLWVANEGLITKLQARCRGYLVRREYLERMNFLKKQQPAILTIQSNWRGYKQRQAYKNRLQYLKDNTGSAVKIQSLVRMHQAKKRYQNRLKYFKDHESDIIKIQAFIRANKARDDYKTLISAEQPPMAVVRKFVHLLDQSDQDFQEELEMMRLREEVVTRIRSNQQLENDLNTMDIKIGLLVKNKITLQEVVSHSKKLTRKNKEQLSDMMRINKQKGGLKALSKEKRMKLEAYQNLFYLLQTNPTYLAKLIFQMPQNKSTKFMDSVIFTLYNYASNQREEYLLLKLFKTALQEEIKSKVDQLHEIITGNPTVIKMVVSFNRGARGQNALRQILAPVVKEIIEERSMNIKTDPVDIYKAWVNQMESQTGEASKLPYDVTPDQALSHEEVKLRLDTSIKNMRAITEKFLSAIVTSVDKIPYGMRLIAKVLKDSLHEKFPDATDDELIKIIGNLLYYRYMNPAIVAPDAFDIIDISAGGGGLTTDQRRNLGSIAKVLQHAASSKMFDKENCHLGSVNDYLSQAHMKFRRFFQAACEVPELEDRFNVDEYSDLVTLTKPVIYISIGEIINTHTLFLDHQDAIAPEHNDPIHELLEDLGEVPTIESLIGEGGVHDPNKEQLAKTEVSLTLTNKFDVPGGENEEMNARTLLLNTKRLIVDVIRFQPGETLTEILETPASAEQDTDHQRAMQRRAIRDAKTPEKMKRNQIQSEENQMSLKEKKEKIEQNLKKLATLGKVNPQNKYQDLINDIAKDIRNQRRYRQRRKAELVKLQQTYSGLISKTAFFEEQIDYYNQYIKTCMDNLASKGKVSKKPGDVKGKKSKQVSQRYTAARLHEKGVLLEIEDLNSNQFKNVIFDICPTEEVGDFEVKAKFMGVQMETFMLHYQDLLQLQYEGVAVMKLFDKAKVNVNLLIFLLNKKFYGK
SIO_010081: iqgap1
subclass of: SO_0000673
so part of: iqgap1
location: join(4730734..4730788,4740146..4740245,4778590..4778746,4779367..4779444,4781502..4781578,4783624..4783691,4786390..4786503,4787398..4787576,4788553..4788643,4791137..4791300,4791756..4791843,4793114..4793277,4794593..4794753,4796500..4796624,4799389..4799552,4816220..4816310,4817075..4817242,4818291..4818433,4819255..4819425,4819526..4819609,4821040..4821111,4823244..4823313,4823796..4824004,4824620..4824775,4826643..4826806,4827236..4827460,4830035..4830175,4832449..4832533,4834675..4834910,4836492..4836624,4838470..4838572,4839302..4839431,4841116..4841203,4841508..4841720,4845302..4845468,4846768..4846890,4849204..4849312,4851376..4851489)
location: region:4730734-4851489:1
so has part: feature:4730734-4730788:1:exon
so has part: feature:4740146-4740245:1:exon
so has part: feature:4778590-4778746:1:exon
so has part: feature:4779367-4779444:1:exon
so has part: feature:4781502-4781578:1:exon
so has part: feature:4783624-4783691:1:exon
so has part: feature:4786390-4786503:1:exon
so has part: feature:4787398-4787576:1:exon
so has part: feature:4788553-4788643:1:exon
so has part: feature:4791137-4791300:1:exon
so has part: feature:4791756-4791843:1:exon
so has part: feature:4793114-4793277:1:exon
so has part: feature:4794593-4794753:1:exon
so has part: feature:4796500-4796624:1:exon
so has part: feature:4799389-4799552:1:exon
so has part: feature:4816220-4816310:1:exon
so has part: feature:4817075-4817242:1:exon
so has part: feature:4818291-4818433:1:exon
so has part: feature:4819255-4819425:1:exon
so has part: feature:4819526-4819609:1:exon
so has part: feature:4821040-4821111:1:exon
so has part: feature:4823244-4823313:1:exon
so has part: feature:4823796-4824004:1:exon
so has part: feature:4824620-4824775:1:exon
so has part: feature:4826643-4826806:1:exon
so has part: feature:4827236-4827460:1:exon
so has part: feature:4830035-4830175:1:exon
so has part: feature:4832449-4832533:1:exon
so has part: feature:4834675-4834910:1:exon
so has part: feature:4836492-4836624:1:exon
so has part: feature:4838470-4838572:1:exon
so has part: feature:4839302-4839431:1:exon
so has part: feature:4841116-4841203:1:exon
so has part: feature:4841508-4841720:1:exon
so has part: feature:4845302-4845468:1:exon
so has part: feature:4846768-4846890:1:exon
so has part: feature:4849204-4849312:1:exon
so has part: feature:4851376-4851489:1:exon

XP_041034289.1
type: Protein
SIO_000068: ncbiprotein

position:4730734:1
position: 4730734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4851489:1
position: 4851489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4730734-4730788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4740146-4740245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4778590-4778746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4779367-4779444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4781502-4781578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4783624-4783691:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4786390-4786503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4787398-4787576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4788553-4788643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4791137-4791300:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4791756-4791843:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4793114-4793277:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4794593-4794753:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4796500-4796624:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4799389-4799552:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4816220-4816310:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4817075-4817242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4818291-4818433:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4819255-4819425:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4819526-4819609:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4821040-4821111:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4823244-4823313:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4823796-4824004:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4824620-4824775:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4826643-4826806:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4827236-4827460:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4830035-4830175:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4832449-4832533:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4834675-4834910:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4836492-4836624:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4838470-4838572:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4839302-4839431:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4841116-4841203:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4841508-4841720:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4845302-4845468:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4846768-4846890:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4849204-4849312:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4851376-4851489:1:exon

iqgap1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13397
gene: iqgap1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP1 isoform X2
translation: MSTSDEVDGAGAVRPHYGSVLDNERLTAEEMDERRRQNIAYEYLCHLEEAKRWMEACLDEELPPTTELEEGLRNGVYLAKLGNFFSPKVVSRKKIYDCEQTRYKATGLHFRHTDNTIQWFNAMSNIGLPKIFYPETTDVYDRKNMPRCIYCIHALSLYLFKLGLAPQIQDLYGKVAFTEEEINNMKTELEKYGIQMPAFSKIGGILANELSVDEAALHAAVIAINDAIEKGVPAETLAAMKNPNAMLVNLNPTQSVQYQNTLSAAKQEKTANARNKDMPGSPQEERDVYEELLTQAEIQGNVNKVNLQNSLMSIDGALGQGDGIALYNALKSPALGLREVELDNCDWYLKQLSSDKQLKAQGSHEPLTKEELQFGVDQANRDAHRFKKMLEAVSRINAAIRKGVAEETVTELMNRDAQLPEVHPYAAELYQQELSTLQQQSHQGNLTHAELAVAVEMLSSVALINRALDAGDVNGVWKQIQNSVTGLTNVDDGNGQRYVDELMRLKAKARAEGNEFLTWNDIQGSVDQVNLVVQEEHDRIKAIGLINEAVDEGDPQKTLKALLLPSAKLADVSSPVAEHYQETLIRTKREKAQETQDDSAVLWLDEIQDTIWKSNKDTQDADKFSLGILAINEAVDSGDTARILGALRSADVGLYGVTSECDDIYQQELTEAKRAKKLEGDNGSQWVRHWVKGGYHYYYNLVTKQGSWEQPSGFVQNNTQLSKEEIQSTISGVTAAYNREQLWVANEGLITKLQARCRGYLVRREYLERMNFLKKQQPAILTIQSNWRGYKQRQAYKNRLQYLKDNTGSAVKIQSLVRMHQAKKRYQNRLKYFKDHESDIIKIQAFIRANKARDDYKTLISAEQPPMAVVRKFVHLLDQSDQDFQEELEMMRLREEVVTRIRSNQQLENDLNTMDIKIGLLVKNKITLQEVVSHSKKLTRKNKEQLSDMMRINKQKGGLKALSKEKRMKLEAYQNLFYLLQTNPTYLAKLIFQMPQNKSTKFMDSVIFTLYNYASNQREEYLLLKLFKTALQEEIKSKVDQLHEIITGNPTVIKMVVSFNRGARGQNALRQILAPVVKEIIEERSMNIKTDPVDIYKAWVNQMESQTGEASKLPYDVTPDQALSHEEVKLRLDTSIKNMRAITEKFLSAIVTSVDKIPYGMRLIAKVLKDSLHEKFPDATDDELIKIIGNLLYYRYMNPAIVAPDAFDIIDISAGGGGLTTDQRRNLGSIAKVLQHAASSKMFDKENCHLGSVNDYLSQAHMKFRRFFQAACEVPELEDRFNVDEYSDLVTLTKPVIYISIGEIINTHTLFLDHQDAIAPEHNDPIHELLEDLGEVPTIESLIGEGGVHDPNKEQLAKTEVSLTLTNKFDVPGGENEEMNARTLLLNTKRLIVDVIRFQPGETLTEILETPASAEQDTDHQRAMQRRAIRDAKTPEKMKRNQIQSEENQMSLKEKKEKIEQNLKKLATLGKVNPQNKYQDLINDIAKDIRNQRRYRQRRKAELVKLQQTYSGLISKTAFFEEQIDYYNQYIKTCMDNLASKGKVSKKPGDVKGKKSKQVSQRYTAARLHEKGVLLEIEDLNSNQFKNVIFDICPTEEVGDFEVKAKFMGVQMETFMLHYQDLLQLQYEGVAVMKLFDKAKVNVNLLIFLLNKKFYGK
SIO_010081: iqgap1
subclass of: SO_0000673
so part of: iqgap1
location: join(4730734..4730788,4740146..4740245,4778590..4778746,4779367..4779444,4781502..4781578,4783624..4783691,4786390..4786503,4787398..4787576,4788553..4788643,4791137..4791300,4791762..4791843,4793114..4793277,4794593..4794753,4796500..4796624,4799389..4799552,4816220..4816310,4817075..4817242,4818291..4818433,4819255..4819425,4819526..4819609,4821040..4821111,4823244..4823313,4823796..4824004,4824620..4824775,4826643..4826806,4827236..4827460,4830035..4830175,4832449..4832533,4834675..4834910,4836492..4836624,4838470..4838572,4839302..4839431,4841116..4841203,4841508..4841720,4845302..4845468,4846768..4846890,4849204..4849312,4851376..4851489)
location: region:4730734-4851489:1
so has part: feature:4730734-4730788:1:exon
so has part: feature:4740146-4740245:1:exon
so has part: feature:4778590-4778746:1:exon
so has part: feature:4779367-4779444:1:exon
so has part: feature:4781502-4781578:1:exon
so has part: feature:4783624-4783691:1:exon
so has part: feature:4786390-4786503:1:exon
so has part: feature:4787398-4787576:1:exon
so has part: feature:4788553-4788643:1:exon
so has part: feature:4791137-4791300:1:exon
so has part: feature:4791762-4791843:1:exon
so has part: feature:4793114-4793277:1:exon
so has part: feature:4794593-4794753:1:exon
so has part: feature:4796500-4796624:1:exon
so has part: feature:4799389-4799552:1:exon
so has part: feature:4816220-4816310:1:exon
so has part: feature:4817075-4817242:1:exon
so has part: feature:4818291-4818433:1:exon
so has part: feature:4819255-4819425:1:exon
so has part: feature:4819526-4819609:1:exon
so has part: feature:4821040-4821111:1:exon
so has part: feature:4823244-4823313:1:exon
so has part: feature:4823796-4824004:1:exon
so has part: feature:4824620-4824775:1:exon
so has part: feature:4826643-4826806:1:exon
so has part: feature:4827236-4827460:1:exon
so has part: feature:4830035-4830175:1:exon
so has part: feature:4832449-4832533:1:exon
so has part: feature:4834675-4834910:1:exon
so has part: feature:4836492-4836624:1:exon
so has part: feature:4838470-4838572:1:exon
so has part: feature:4839302-4839431:1:exon
so has part: feature:4841116-4841203:1:exon
so has part: feature:4841508-4841720:1:exon
so has part: feature:4845302-4845468:1:exon
so has part: feature:4846768-4846890:1:exon
so has part: feature:4849204-4849312:1:exon
so has part: feature:4851376-4851489:1:exon

XP_041034290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4730734-4730788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4740146-4740245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4778590-4778746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4779367-4779444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4781502-4781578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4783624-4783691:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4786390-4786503:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4787398-4787576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4788553-4788643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4791137-4791300:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4791762-4791843:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4793114-4793277:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4794593-4794753:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4796500-4796624:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4799389-4799552:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4816220-4816310:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4817075-4817242:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4818291-4818433:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4819255-4819425:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4819526-4819609:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4821040-4821111:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4823244-4823313:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4823796-4824004:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4824620-4824775:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4826643-4826806:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4827236-4827460:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4830035-4830175:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4832449-4832533:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4834675-4834910:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4836492-4836624:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:4838470-4838572:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:4839302-4839431:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4841116-4841203:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4841508-4841720:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4845302-4845468:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4846768-4846890:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4849204-4849312:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:4851376-4851489:1:exon

crtc3
type: Gene
subclass of: SO_0000704
RO_0002162: 13397
gene: crtc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4871092..4948176
location: region:4871092-4948176:1
so has part: feature:4871092-4948176:1:exon
subclass of: SO_0000010

121272067
type: Gene
SIO_000068: ncbigene

position:4871092:1
position: 4871092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4948176:1
position: 4948176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4871092-4948176:1:exon

crtc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13397
gene: crtc3
product: CREB regulated transcription coactivator 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041178488.1
SIO_010081: crtc3
subclass of: SO_0000673
so part of: crtc3
location: join(4871092..4871426,4872698..4873057,4893598..4893708,4904655..4904789,4921852..4921913,4928135..4928200,4929655..4929758,4930662..4930697,4931789..4931874,4933361..4933410,4934286..4934503,4935658..4935950,4936313..4936492,4937970..4938125,4940105..4940306,4941155..4946811)
location: region:4871092-4946811:1
so has part: feature:4871092-4871426:1:exon
so has part: feature:4872698-4873057:1:exon
so has part: feature:4893598-4893708:1:exon
so has part: feature:4904655-4904789:1:exon
so has part: feature:4921852-4921913:1:exon
so has part: feature:4928135-4928200:1:exon
so has part: feature:4929655-4929758:1:exon
so has part: feature:4930662-4930697:1:exon
so has part: feature:4931789-4931874:1:exon
so has part: feature:4933361-4933410:1:exon
so has part: feature:4934286-4934503:1:exon
so has part: feature:4935658-4935950:1:exon
so has part: feature:4936313-4936492:1:exon
so has part: feature:4937970-4938125:1:exon
so has part: feature:4940105-4940306:1:exon
so has part: feature:4941155-4946811:1:exon

position:4946811:1
position: 4946811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4871092-4871426:1:exon

position:4871426:1
position: 4871426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4872698-4873057:1:exon

position:4872698:1
position: 4872698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4873057:1
position: 4873057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4893598-4893708:1:exon

position:4893598:1
position: 4893598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4893708:1
position: 4893708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4904655-4904789:1:exon

position:4904655:1
position: 4904655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4904789:1
position: 4904789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4921852-4921913:1:exon

position:4921852:1
position: 4921852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4921913:1
position: 4921913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4928135-4928200:1:exon

position:4928135:1
position: 4928135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4928200:1
position: 4928200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4929655-4929758:1:exon

position:4929655:1
position: 4929655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4929758:1
position: 4929758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4930662-4930697:1:exon