Pseudorhizobium flavum strain YW14 plasmid 5, complete sequence.
type: Entry
definition: Pseudorhizobium flavum strain YW14 plasmid 5, complete sequence.
sequence version: NZ_LR723674.1
sequence date: 2023-04-28
sequence: sequence
division: CON
label: NZ_LR723674.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA104296051
keyword: RefSeq
source: Pseudorhizobium flavum
organism: Pseudorhizobium flavum
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Pseudorhizobium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLR723674.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/28/2023 04:57:52\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,621\nCDSs (total) :: 4,558\nGenes (coding) :: 4,447\nCDSs (with protein) :: 4,447\nGenes (RNA) :: 63\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 4\nPseudo Genes (total) :: 111\nCDSs (without protein) :: 111\nPseudo Genes (ambiguous residues) :: 0 of 111\nPseudo Genes (frameshifted) :: 53 of 111\nPseudo Genes (incomplete) :: 79 of 111\nPseudo Genes (internal stop) :: 19 of 111\nPseudo Genes (multiple problems) :: 33 of 111\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 107320
topology: circular
so has quality: SO_0000988
location: 1..107320
location: region:1-107320:1
RO_0002162: 1335061

NZ_LR723674
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA104296051
type: BioSample
SIO_000068: biosample

1
title: Direct Submission
author: Lassalle, F.
journal: Submitted (20-OCT-2020) UNIVERSITY COLLEGE LONDON, UCL Genetics Institute, Gower Street, London WC1E 6BT, United Kingdom

2
title: Direct Submission
author: Lassalle, F.
journal: Submitted (07-OCT-2019) UNIVERSITY COLLEGE LONDON, UCL Genetics Institute, Gower Street, London WC1E 6BT, United Kingdom

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107320:1
position: 107320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-107320:1:source
so part of: sequence
organism: Pseudorhizobium flavum
mol type: genomic DNA
strain: YW14
isolation source: Paddy soil under the long-term application of triazophos insecticide
type material: type strain of Rhizobium flavum
plasmid: 5
country: China
collection date: 2008-08-07
collected by: Jun Zhang
identified by: Jun Zhang

1335061
type: Taxonomy
SIO_000068: taxonomy

GFD27_RS23055
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS23055
old locus tag: RFYW14_04646
so part of: sequence
location: complement(join(106106..107320,1..279))
location: region:1-107320:-1
so has part: feature:1-279:-1:exon
so has part: feature:106106-107320:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107320:-1
position: 107320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-279:-1:exon

position:279:-1
position: 279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106106-107320:-1:exon

position:106106:-1
position: 106106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GFD27_RS23055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS23055
old locus tag: RFYW14_04646
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015916284.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MRYLIPIASKDDLFPKEEYHFPKPLIEVDGIPMIALVVGSIRRRDPSARFIFVVLRQDVLDYSLDSILRLMGGEDCVVVELTSPTMGAVCSALMAIDHIDDDQPLVICNGDQVIDANMGAIADSFRHSEAEAGVVTFPSVHPRWSYIREDADGRVVETAEKRVLSRKAIAGYYYFHKGSSFVRWAQDCLLKSDPVGGKYYLSSVLNEVILSGGRIMQFEIPAESYVSFYSPKRIELYQAENQGRLAALSQPGPSVQVVIPMAGLGSRFSQAGYAKPKPFIDVDGVTMIERVMDNLRVDGGRFILIARRDHLEAEPAVVENLMRRGDISFSPIDFVTEGAACTVLTARSHLDLEAPLMIANCDQIVDFDCSAFIKDAMDRALDGSILCFRDPDRDPKWSFARINDNGRVDEVREKVAISDLATVGIYYFRRTGDFIDAALDMITANDRSNNEFYVCPVYNYLCRRGSQIGVYEIGSQAMHGIGTPADLNDYLDLLKIA
SIO_010081: GFD27_RS23055
subclass of: SO_0000673
so part of: GFD27_RS23055
location: complement(join(106106..107320,1..279))
location: region:1-107320:-1
so has part: feature:1-279:-1:exon
so has part: feature:106106-107320:-1:exon

WP_077549247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106106-107320:-1:exon

GFD27_RS22545
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22545
old locus tag: RFYW14_04561
so part of: sequence
location: complement(279..905)
location: region:279-905:-1
so has part: feature:279-905:-1:exon
subclass of: SO_0000010

position:905:-1
position: 905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279-905:-1:exon

GFD27_RS22545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22545
old locus tag: RFYW14_04561
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003163966.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD family phosphatase
translation: MIKAVLFDMDGVLIDAKEWHYETLNDALAVFGLTITRTEHLAVYDGLPTRKKLEILSRTHGLSPKLHEFLNTLKQQMTYRVIVEKCRPVFHHEYALGRLHREGKRLVVCSNSVRSSVEAMMHHSNLLKYMDFLLSNQDVVKAKPDPEIYLTAMERLKLAPHECLILEDNDHGIQAARASGAHVMVVGSINDVNYQRISQEITTIEAIH
SIO_010081: GFD27_RS22545
subclass of: SO_0000673
so part of: GFD27_RS22545
location: complement(279..905)
location: region:279-905:-1
so has part: feature:279-905:-1:exon

WP_077549246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279-905:-1:exon

GFD27_RS22550
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22550
old locus tag: RFYW14_04562
so part of: sequence
location: complement(933..1553)
location: region:933-1553:-1
so has part: feature:933-1553:-1:exon
subclass of: SO_0000010

position:933:-1
position: 933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1553:-1
position: 1553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933-1553:-1:exon

GFD27_RS22550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22550
old locus tag: RFYW14_04562
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014189897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEILAHRGWWLDPVEKNTEAAFRRAFESGFGVETDVRDQNGILRIAHDMPVGDNSLDFNDFMLLHHSYERAGTVALNIKADGLQRSIRAALAPASPPALFCFDMSVPDALGYLKEGFITYTRHSELEPVPSFYDKADGVWLDAFESDWITPEIVEQHLAAGKKVALVSPELHGREYRAAWEMWRDLKSVDLAICTDFPDRAADFWK
SIO_010081: GFD27_RS22550
subclass of: SO_0000673
so part of: GFD27_RS22550
location: complement(933..1553)
location: region:933-1553:-1
so has part: feature:933-1553:-1:exon

WP_077549245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:933-1553:-1:exon

GFD27_RS22555
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
gene: glf
locus tag: GFD27_RS22555
old locus tag: RFYW14_04563
so part of: sequence
location: complement(1718..2875)
location: region:1718-2875:-1
so has part: feature:1718-2875:-1:exon
subclass of: SO_0000010

position:1718:-1
position: 1718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2875:-1
position: 2875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1718-2875:-1:exon

GFD27_RS22555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
gene: glf
locus tag: GFD27_RS22555
old locus tag: RFYW14_04563
EC number: 5.4.99.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020811333.1
GO function: GO:0008767 - UDP-galactopyranose mutase activity [Evidence IEA]
GO process: GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-galactopyranose mutase
translation: MSVDKRILIVGAGLSGAVIGRELALKGYQVDIVDSRDHIGGNCHTVRDEATGVMVHVYGPHIFHTDDAEVWDYVNGFTSFLPYKNRVKTTSGGQVYSLPVNLHTINQFFGKTFRPDEARAFLEEQADETITDPQTFEEQALRFVGRDLYEAFFKGYTQKQWGCSPTELPASILKRLPVRFNYDDNYFFHKYQGMPESGYSDMIERILDHPAITVTLNTKFKRCDGAGYGHVFYSGPLDGYFDYELGRLGYRTLDFERFTYDGDYQGCAVMNFGEVDVPFTRITEHKHFSPWEEHSGSVCYREYSRACEPNDIPYYPIRLVKEKAQLADYVALAQQERDVTFVGRLGTYRYLDMDVTIREALDTARLYLDGKADNLPMKSFLSSPI
SIO_010081: GFD27_RS22555
subclass of: SO_0000673
so part of: GFD27_RS22555
location: complement(1718..2875)
location: region:1718-2875:-1
so has part: feature:1718-2875:-1:exon

WP_077549244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1718-2875:-1:exon

GFD27_RS22560
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22560
old locus tag: RFYW14_04564
so part of: sequence
location: complement(2906..4192)
location: region:2906-4192:-1
so has part: feature:2906-4192:-1:exon
subclass of: SO_0000010

position:2906:-1
position: 2906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4192:-1
position: 4192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2906-4192:-1:exon

GFD27_RS22560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22560
old locus tag: RFYW14_04564
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014327299.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPVILVTFAGRQTRMEILTRYIRRALDLGIIDEWHVWDFTRSAGDHAWVTQEFGPVRYMGSKVPYQEAGTVSATSSFRTTARIRHDLHVAVTPHDRPQECYEIVAGGWNNTHSALRKISRDQMGHFDRSEDATLWSKPTPSLLSSGRPNDVTFSIDPAGVPTLRVNDVTLGVWPELDLTAGATVHIRGGWGADLELCDVEARTRRYIGNPNEQMPYYQAYDYYATRVEKFDEAVFLKCDDDIVYIELDKLDEFIQFRRTNPHYFIVSANVINNGVCAYLQQAAGSIPTVVGDFEHPPGGFGGTLWESAERAAKLHAYFLGQDGQTLPLSQSVVDWTERQSINFITWLGRDLRHMALPQCDDEYALSVGIPTFLGRPSAIYSNFTVSHLSFGPQERGWDPTALINAYERLMQSRLSPEAEEPLLRVAS
SIO_010081: GFD27_RS22560
subclass of: SO_0000673
so part of: GFD27_RS22560
location: complement(2906..4192)
location: region:2906-4192:-1
so has part: feature:2906-4192:-1:exon

WP_077549243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2906-4192:-1:exon

GFD27_RS22565
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22565
old locus tag: RFYW14_04565
so part of: sequence
location: complement(4245..6254)
location: region:4245-6254:-1
so has part: feature:4245-6254:-1:exon
subclass of: SO_0000010

position:4245:-1
position: 4245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6254:-1
position: 6254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4245-6254:-1:exon

GFD27_RS22565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22565
old locus tag: RFYW14_04565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015916637.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVSTPIVSARTQQLSLSELFQIAEEQTAAGQAAQAVELYKTWIAFNDANPLLHLAYFNYAVSLSKAGDIAGALNALRAALKLNPDFGQAHVNLGRTLEDCGLIGQAVLQWRSYVDATNDITPDRINHRHLVLQHIGRVLEGAGKLEEAEAALWQAMELQPHRTEAAQHWTSLRMRQVKWPVITPSLNITARQFMDAMSSMTAACYADDPLFQLAKAYRYCRTTVGRPDLSNFTRKPVRKKTGTGARLRVGYVSSDLRQHAVGFALSEVLELHDKSDVEVFAYYCGEPAPLDQTQARIKKAVDHWRDITSLSDLEAARQIVVDEIDILVDVNGYTKHARTKIFAHQPAPVIVNFCGYPGSMASPYHQYMIADEFIVPPENELYYTEKVLRIPCNQPVDRKRAVNPRPTRASVGLPENAFVFASFNGMQKISASCFARWMAILLSTPGSVLWLLVGDDSVNERVKQMAQQAGVSPDRLIFAGKVQNPDHLARLGLADLFLDTFPYGAHSTAADAITQGLPVLTVPGKSFASRFCASIVAAAGIPEMICDGPDDYVRKAVMYAKNPARLIAVRESLQSQRDSCPLRDMDGLVRRLEELFWQMQGDAERGETPVPDLRNLDVYYEIGAELAVANVEFESEHAYRQRYLKQLKLLHEYAPLMPDARLWTGAAE
SIO_010081: GFD27_RS22565
subclass of: SO_0000673
so part of: GFD27_RS22565
location: complement(4245..6254)
location: region:4245-6254:-1
so has part: feature:4245-6254:-1:exon

WP_077549242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4245-6254:-1:exon

GFD27_RS22570
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22570
old locus tag: RFYW14_04566
so part of: sequence
location: complement(6433..9864)
location: region:6433-9864:-1
so has part: feature:6433-9864:-1:exon
subclass of: SO_0000010

position:6433:-1
position: 6433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9864:-1
position: 9864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6433-9864:-1:exon

GFD27_RS22570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22570
old locus tag: RFYW14_04566
inference: COORDINATES: protein motif:HMM:NF040115.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSIVTSLSVNQIKSLSSTAIANLSTTDVAALTSTQIKALSSAQIAAFETEDLAAFSSTQLSAVTAAAITGLTLSQMESLSSTNIAGLTSTQMNALSTAQVGQLNSEQVEALTSKQIAALSAAALGTMTSDELATFSTDEVAAINTKVLAALSTDAIANFSSDQLGALSSRQIAALTTAQVAVLTSEQIDGLTSTQVSAFTVKQVAALTTAAITSLDSTQIAALNAKQIAALTTDQVATLDSDQVTALSSTQIAALSAAALGTMTSDELATFSTDEVAAINTKVLAALSTDAIANFSSDQLGALSSRQIAALTTAQVAVLTSEQIDGLTSTQVSAFTVKQVAALTTAAITSLDSTQIAALNAKQIAALTTDQVATLDSDQVTALSSTQIAALSAAALGTMTSDELATFSTDEVAAISTKVLAALSTDTIANFDSAQLGALSSRQIAALTTAQVAVLTSEQIDGLTSTQVSAFTVKQVAALSTEAVSSLESDQITALTSRQVAALTTAQVDAFTSDQVQALTSTQIAALGAIALDTMTSDEIATFSTDEIAAINTKVLAALSSATIANLDSDKIAALSSKQVAALTTAQVATLTSAQVDGLTSANIVALTAKQVAALTTDALASLDSDQIGALSSKQIAALTTDQVASLNSDQVEALSSSQIAALSAAALGTMASDEIATFSSDEVAAISTKVLAALSSATIANLDSDKIAALSSKQVAALTTAQVATLTSAQVDGLTSANIVALTAKQVAALTTDALASLDSDQIGALSSKQIAALTTDQVASLNSDQVEALSSSQIAALSAAALGTMASDEIATFSSDEVAAISTKVLAALSSATIANLDSDKIAALSTSQVAALTTAQVATLTSAQVDGLTSDQVAALTPGQVAALSTDAVASLESTQIEALTSRQVASLTTDQVASLTSDQVDALTSSQVAALSAAALGTMTSDEIATFSSEEIAAISTKVIAGLSSDTVSFLSSDQIGALSTSQLTLLTTAQIATLSSDQVDGLTSGQVAALTAKQIGSLTTAAIASLESDQIGALTSTQIAALSTDQVATLTSDQVEALSSVQIAALSSAALEAMDSSEIATFTTDEIAAINVKALPGLSTDDIAALTSEQAQALTSQQIAALTSAQVEAVIAAYNDV
SIO_010081: GFD27_RS22570
subclass of: SO_0000673
so part of: GFD27_RS22570
location: complement(6433..9864)
location: region:6433-9864:-1
so has part: feature:6433-9864:-1:exon

WP_152338523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6433-9864:-1:exon

GFD27_RS22575
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22575
old locus tag: RFYW14_04567
so part of: sequence
location: 10375..10683
location: region:10375-10683:1
so has part: feature:10375-10683:1:exon
subclass of: SO_0000010

position:10375:1
position: 10375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10683:1
position: 10683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10375-10683:1:exon

GFD27_RS22575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22575
old locus tag: RFYW14_04567
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIENLRLHNDPPTPKGFKRHCTFSVQVNSDIRLYEMQLLQAPDGRYLVVPPKHPNGAPMCSLSPELRDEIAKLASRELISSYAKQAGDWFNTNYLNHQKAR
SIO_010081: GFD27_RS22575
subclass of: SO_0000673
so part of: GFD27_RS22575
location: 10375..10683
location: region:10375-10683:1
so has part: feature:10375-10683:1:exon

WP_077549240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10375-10683:1:exon

GFD27_RS22580
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22580
old locus tag: RFYW14_04568
so part of: sequence
location: complement(10719..11540)
location: region:10719-11540:-1
so has part: feature:10719-11540:-1:exon
subclass of: SO_0000010

position:10719:-1
position: 10719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11540:-1
position: 11540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10719-11540:-1:exon

GFD27_RS22580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22580
old locus tag: RFYW14_04568
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004432490.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellin
translation: MAALDTLRSISRDMSTTQNRISSGLKVEQASDNAAYWSIATTMKAESSSLSVVGEALGMGSSLADIANTAVESLVELMSKVRDRVVAAGESTTDKAKIQTELTELFSQIDSTVNGAAFNKVNWLTGDNNGTAITEAEVLSGANGSTLTTINVNLEASANGNVAAIVGTVTTIDVSAAADAAEISGYLATIDTAMADLTTQGATFGAATTRIDLQKDFISSITDAIDRGVGSLVDADMNEESTRLKALQTQQQLAVQSLSIANSNTDLILQLFR
SIO_010081: GFD27_RS22580
subclass of: SO_0000673
so part of: GFD27_RS22580
location: complement(10719..11540)
location: region:10719-11540:-1
so has part: feature:10719-11540:-1:exon

WP_244969378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10719-11540:-1:exon

GFD27_RS22585
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22585
old locus tag: RFYW14_04569
so part of: sequence
location: complement(11879..12739)
location: region:11879-12739:-1
so has part: feature:11879-12739:-1:exon
subclass of: SO_0000010

position:11879:-1
position: 11879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12739:-1
position: 12739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11879-12739:-1:exon

GFD27_RS22585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22585
old locus tag: RFYW14_04569
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004432490.1
GO function: GO:0005198 - structural molecule activity [Evidence IEA]
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellin
translation: MASILTNTAAMAALQTLRSIDRAMSTTQDRISSGLKVGSAADNAAYWSIATTMRSESSSLTVVGEALGMGASLAEISNTAVQSIVELMSQVRDRVVAAGEQTTDRAKLQTELDELYAQMGQTTAAATFNGMNWLTATGETTILSGLSKDSSGATILDFITVPLEASGDNIAAIVETVAGDGTPGSGLSVATDAEVATALEAVDAAIKGLTELGARFGAASTRIDTQQDFIHALTDAIDRGIGALVDADLNEESSKIKALQTQQQLAVQSLQIANTGPEMILQLFRS
SIO_010081: GFD27_RS22585
subclass of: SO_0000673
so part of: GFD27_RS22585
location: complement(11879..12739)
location: region:11879-12739:-1
so has part: feature:11879-12739:-1:exon

WP_077549238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11879-12739:-1:exon

GFD27_RS22590
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22590
old locus tag: RFYW14_04571
so part of: sequence
location: 13428..14729
location: region:13428-14729:1
so has part: feature:13428-14729:1:exon
subclass of: SO_0000010

position:13428:1
position: 13428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14729:1
position: 14729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13428-14729:1:exon

GFD27_RS22590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22590
old locus tag: RFYW14_04571
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012556612.1
GO process: GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar hook protein FlgE
translation: MSIFGTMRTAVSGMNGQANRLGTVGDNIANANTVGYKGASTSFTSLILPSSEGSYNSGGVETKVRYSISQEGGYSATTSLTDLSIKGNGFFIVKAEGGSPVLTRAGNFVPDGDGNLVNAAGFALMGYSYNAGAPAVVVNGFDGLVPVNVKQQGLSAQASTSGYFQGNINAGAPVVAAADLPSANADPGADNTFKTSMVGYDTLGNVVQYDYYFTKTAEGDPSVPTESEWEVAIYRNADAATGGTSSFPYTSGPIATGTLMFDSYGKLTESGTVTPTITLDMDDPVTGQTIEMDFGGLIQLGAQSSGEGKLDGLAASELKGVNIDKDGTVYAQYADGSLKPLYRIPLATVASPDLLTPGSGNVYTANTESGVTVTGFAQTNGLGYIQSGSLESSNVDIAEELTEMIEAQRVYTANSKVFQTGSDLMEVLVNLKR
SIO_010081: GFD27_RS22590
subclass of: SO_0000673
so part of: GFD27_RS22590
location: 13428..14729
location: region:13428-14729:1
so has part: feature:13428-14729:1:exon

WP_077549237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13428-14729:1:exon

GFD27_RS22595
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22595
old locus tag: RFYW14_04572
so part of: sequence
location: 14770..15258
location: region:14770-15258:1
so has part: feature:14770-15258:1:exon
subclass of: SO_0000010

position:14770:1
position: 14770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15258:1
position: 15258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14770-15258:1:exon

GFD27_RS22595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22595
old locus tag: RFYW14_04572
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSACDLALLDPALHDHYVQHRLSPDPQLSGHGGGVWERSGPGPIAFIGNTWTNGVTLAPEFKVAGTTRLVALSYAWDPARLDAWAPQCQVRLIVTDAVNLKSYLLDVTSAPSGAVIVPAEADLSANCSVVFQLKAGSRTGPLKKPPYIENYAVTGRYRLLD
SIO_010081: GFD27_RS22595
subclass of: SO_0000673
so part of: GFD27_RS22595
location: 14770..15258
location: region:14770-15258:1
so has part: feature:14770-15258:1:exon

WP_139346335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14770-15258:1:exon

GFD27_RS22600
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22600
old locus tag: RFYW14_04573
so part of: sequence
location: complement(15769..18075)
location: region:15769-18075:-1
so has part: feature:15769-18075:-1:exon
subclass of: SO_0000010

position:15769:-1
position: 15769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18075:-1
position: 18075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15769-18075:-1:exon

GFD27_RS22600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22600
old locus tag: RFYW14_04573
inference: COORDINATES: protein motif:HMM:NF018458.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1217 domain-containing protein
translation: MLSAYTSYSLQTRDLQASLKRVASDSMVAREAAYYKENIGKVRSVDDLMNDYRLYNYVVKAHGLEEMAYAKAFIRQVLESDLNDPKSLANRLTDTRYLTLAAAFDFGNRSASPALQSEAQQDALVAAYYSQITNHEKQQKAETDYYISEAVTISNVDDIFRDTALRDYIYSAFAIDGAITNEEQLKKIIASDPADPASHVNATYGPKLEEWQLKIDDLVLERQQPGLSSTRKEQIDYLITSYQKFIGQAENYFKLASAFSFNPDGTPIDGVPAQNNDQILFVAERFVSSSGRLDETGATLNYGYFTSKIDEVQSVGDLTADSRLKDMLIVAFGLPKYTTTTGKLEWALTQDPSDPDSPIHAEAPGFVALARAFNFSADGTLADGISAMSAEQQNTMMSAYFERYDDEYEAADEKTVNQYKKYVGLVSNLSDFLSASAGSTAVRSFALQAFDIGPNELSLLDLRKILTSDINDRRSFVNSLKDDRFLRLAKAFNFNTDGTIGTPLLAQPESEITRLSKAYLAEKTKSDTNAAAKTKAEDETKYYREQIERISSVSELLSNKRLVSFMLTAEGIDPAKVKLSDLEKMFKSDLNDPKSFVNQLEDQGFRLLVASFNFGPDGKISESAASVQTRRTLMSTQDMYLRQTLEEQVGEENEGARLALYFQRMAPTIKNVYEILSDTAIAKVVRTMFGLPDEIANGNIDMQANVIKKNLDLADLKDPEKVEKLISRFLAFYEMENGAPDPVLMAFQAPGEISADTLTALALLRTRR
SIO_010081: GFD27_RS22600
subclass of: SO_0000673
so part of: GFD27_RS22600
location: complement(15769..18075)
location: region:15769-18075:-1
so has part: feature:15769-18075:-1:exon

WP_077549236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15769-18075:-1:exon

GFD27_RS22605
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22605
so part of: sequence
location: complement(18264..18590)
location: region:18264-18590:-1
so has part: feature:18264-18590:-1:exon
subclass of: SO_0000010

position:18264:-1
position: 18264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18590:-1
position: 18590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18264-18590:-1:exon

GFD27_RS22605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKAALEAATPNQQEQALAYAADFIDRLCFQGRKLKPSQMRAWPRAGVLDPNGKSVTGIPAEIQYATDLVAGSVIADHVDRETVLAHVLFIIDHLIDECGRVSKPSRPH
SIO_010081: GFD27_RS22605
subclass of: SO_0000673
so part of: GFD27_RS22605
location: complement(18264..18590)
location: region:18264-18590:-1
so has part: feature:18264-18590:-1:exon

WP_139346334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18264-18590:-1:exon

GFD27_RS22610
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22610
old locus tag: RFYW14_04574
so part of: sequence
location: complement(18845..19831)
location: region:18845-19831:-1
so has part: feature:18845-19831:-1:exon
subclass of: SO_0000010

position:18845:-1
position: 18845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19831:-1
position: 19831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18845-19831:-1:exon

GFD27_RS22610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22610
old locus tag: RFYW14_04574
EC number: 2.3.1.-
inference: COORDINATES: protein motif:HMM:NF013884.2
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MAIVAVVTTHAANFGLSLDGWNYDFVLVLREMVNFAVPTFFLLAGYFANSRSLNDPVGFWRLRAFRILPTYLFWTAVYLLIFAPGDLIHPALAQHVLTGTGVFIGYYVVVLVQMTALTPMLNRIKSLRLHGVIMLVLIGAGLSFTYAAQATTTFGKFGTFPYSALPFFVWYPFYHFGFVVAKYDLPHRLQRIKINHLIAVALLALLSAVLEAFGLWYDKPSLASSQLKATSLLCSFVVAMLVLRLSSTSFSPPQALVTLGRSSFFIYLTHLLVLIAVEPLMRRVPLLTEVQALYIPVLVIVVLAAMWGAIRGITLANNRPVNRLLGIE
SIO_010081: GFD27_RS22610
subclass of: SO_0000673
so part of: GFD27_RS22610
location: complement(18845..19831)
location: region:18845-19831:-1
so has part: feature:18845-19831:-1:exon

WP_172977953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18845-19831:-1:exon

GFD27_RS22615
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22615
old locus tag: RFYW14_04575
so part of: sequence
location: 20128..20472
location: region:20128-20472:1
so has part: feature:20128-20472:1:exon
subclass of: SO_0000010

position:20128:1
position: 20128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20472:1
position: 20472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20128-20472:1:exon

GFD27_RS22615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22615
old locus tag: RFYW14_04575
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008530272.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGFGHLRDFAKSCFGGSPFLRLAIVGFGQCLRDLVGVDPDASEKDLRGFVIKRKISGGTVSRNGRQARDSLLGLSKTCQKLGLSFWHYLGDRLGICTSQAAIPPLATMIVARS
SIO_010081: GFD27_RS22615
subclass of: SO_0000673
so part of: GFD27_RS22615
location: 20128..20472
location: region:20128-20472:1
so has part: feature:20128-20472:1:exon

WP_235864348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20128-20472:1:exon

GFD27_RS22620
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22620
old locus tag: RFYW14_04576
so part of: sequence
location: complement(20478..20825)
location: region:20478-20825:-1
so has part: feature:20478-20825:-1:exon
subclass of: SO_0000010

position:20478:-1
position: 20478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20825:-1
position: 20825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20478-20825:-1:exon

GFD27_RS22620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22620
old locus tag: RFYW14_04576
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007598477.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQQIDIDSLDEATLIELNARIVERLQFLHHQRTAAALQEIRVGSGVEFEGPGGIQVRGVVIRRNKKTVTVHADDERQWNVSPTLLKPTGTHVLDTAGQIQSEDSKVVSFPKPDRR
SIO_010081: GFD27_RS22620
subclass of: SO_0000673
so part of: GFD27_RS22620
location: complement(20478..20825)
location: region:20478-20825:-1
so has part: feature:20478-20825:-1:exon

WP_152338524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20478-20825:-1:exon

GFD27_RS22625
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22625
old locus tag: RFYW14_04577
so part of: sequence
location: 21176..21433
location: region:21176-21433:1
so has part: feature:21176-21433:1:exon
subclass of: SO_0000010

position:21176:1
position: 21176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21433:1
position: 21433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21176-21433:1:exon

GFD27_RS22625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22625
old locus tag: RFYW14_04577
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018096619.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapB family antitoxin
translation: MSEPQLSIRSTKARDLAHALSRRTGQPINRLVEQALEHYDQELRQKQAKTPADALWELMAEGRRSVPPGTTSAHDDLYDENGLPK
SIO_010081: GFD27_RS22625
subclass of: SO_0000673
so part of: GFD27_RS22625
location: 21176..21433
location: region:21176-21433:1
so has part: feature:21176-21433:1:exon

WP_077549233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21176-21433:1:exon

GFD27_RS22630
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22630
old locus tag: RFYW14_04578
so part of: sequence
location: 21430..21834
location: region:21430-21834:1
so has part: feature:21430-21834:1:exon
subclass of: SO_0000010

position:21430:1
position: 21430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21834:1
position: 21834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21430-21834:1:exon

GFD27_RS22630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22630
old locus tag: RFYW14_04578
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006724018.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MIALDTSAVVATALGEPEAELFHTLVSREEILVGWPTLLEIRMVLTGKRFAGAAAVISQLTALPNVNTVAFGERHYHAAEVAFERFGKGRHPARLNMGDCFSYAVSAVAKAPLLFKGRDFSETDLKLHPASSTW
SIO_010081: GFD27_RS22630
subclass of: SO_0000673
so part of: GFD27_RS22630
location: 21430..21834
location: region:21430-21834:1
so has part: feature:21430-21834:1:exon

WP_077549232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21430-21834:1:exon

GFD27_RS22635
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22635
old locus tag: RFYW14_04579
so part of: sequence
location: 22208..22765
location: region:22208-22765:1
so has part: feature:22208-22765:1:exon
subclass of: SO_0000010

position:22208:1
position: 22208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22765:1
position: 22765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22208-22765:1:exon

GFD27_RS22635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22635
old locus tag: RFYW14_04579
inference: COORDINATES: protein motif:HMM:NF024784.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HNH endonuclease
translation: MRWLDGKNILSNRASHIFYIGPIPEGHIVRHRCGNPGCVNPKHLLLGTQEDKLQDARDRDRFARGEQHPSAHLTEEDIRAILASDEHRDILAKRYRVTSRYISMIQRGVRWSHIVVDHLPEKVRVRRQLAGSGQGHHKTHLTPDDVRAIRKDDRVQSKIAADFNITRQAVSNIKLRKHWRDVPDD
SIO_010081: GFD27_RS22635
subclass of: SO_0000673
so part of: GFD27_RS22635
location: 22208..22765
location: region:22208-22765:1
so has part: feature:22208-22765:1:exon

WP_172977954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22208-22765:1:exon

GFD27_RS22640
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22640
old locus tag: RFYW14_04580
so part of: sequence
location: 23190..23381
location: region:23190-23381:1
so has part: feature:23190-23381:1:exon
subclass of: SO_0000010

position:23190:1
position: 23190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23381:1
position: 23381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23190-23381:1:exon

GFD27_RS22640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22640
old locus tag: RFYW14_04580
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDSPFSDDIEMTAWVIAARHMTAGQKDVTKMIADAIRQERARCAGLMRSALNSDEDHLSGGA
SIO_010081: GFD27_RS22640
subclass of: SO_0000673
so part of: GFD27_RS22640
location: 23190..23381
location: region:23190-23381:1
so has part: feature:23190-23381:1:exon

WP_077549230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23190-23381:1:exon

GFD27_RS22645
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22645
old locus tag: RFYW14_04581
so part of: sequence
location: complement(23498..24112)
location: region:23498-24112:-1
so has part: feature:23498-24112:-1:exon
subclass of: SO_0000010

position:23498:-1
position: 23498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24112:-1
position: 24112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23498-24112:-1:exon

GFD27_RS22645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22645
old locus tag: RFYW14_04581
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330936.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid pRiA4b ORF-3 family protein
translation: MTSSERIARIIVKLDHIDPAIWRRVEVPITTSLKGLHDIIQAVMPFQDYHLFEFNVGGKRYAVPDPEWDFGRETYAARNVRIGALVDRGITTFNYTYDFGDDWRHSITVEAVTDADPAVEYPRFVDGERRAPPEDVGGLSGFEEFLNAMAKPRHAQHREVVAWYGGRFEPDNIGVDTINDRIAKIARRRTLGKVGYAKSQNNRH
SIO_010081: GFD27_RS22645
subclass of: SO_0000673
so part of: GFD27_RS22645
location: complement(23498..24112)
location: region:23498-24112:-1
so has part: feature:23498-24112:-1:exon

WP_152338515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23498-24112:-1:exon

GFD27_RS22650
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22650
old locus tag: RFYW14_04582
so part of: sequence
location: complement(24109..25767)
location: region:24109-25767:-1
so has part: feature:24109-25767:-1:exon
subclass of: SO_0000010

position:24109:-1
position: 24109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25767:-1
position: 25767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24109-25767:-1:exon

GFD27_RS22650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22650
old locus tag: RFYW14_04582
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014330937.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MNDAAEQLPDDLASALAALAAERARRITAEAEAATAKAEAASAKALVSHSEALIARLKLEIEKVRRELYGSRSERKARLLEQMELQLEELEADAGEDELAAEIAANASTVSAFERKRPSRKPFPEHLPRERVVIAAPTNCSCCGSAKLSKLGEDITETLEVIPRQWKVIQTVREKFSCRECEKITQPPAPFHVTPRGFAGPNLLAMILFEKFAQHQPLNRQSERYAREGIDLSLSTLADQVGACAAALKPIHSLIEAHVLAAERLHGDDTTVPILAKGKTDTGRIWTYVRDDRPFGGLSPPAALFYASRDRRQEHPERHLKTFTGILQADAYGGYNPLYKVDRDPAPLRQALCWAHSRRKFFVLADIATNAKRGSKAAPISPMALEAVKRIDALFDFEREINGLAAQQRLEHRCKNSLPLVEELHDWLQTERTKLSRSSPVAEAIEYMLKRWDGFTSFLDDGRVCLTNNAAERALRGFALGRKSWLFAGSDRGADRAAFMATLIMTAKLNDIDPQAWLADVLARIADTPVSRLEQLLPWHWTSAQAPMALAS
SIO_010081: GFD27_RS22650
subclass of: SO_0000673
so part of: GFD27_RS22650
location: complement(24109..25767)
location: region:24109-25767:-1
so has part: feature:24109-25767:-1:exon

WP_152338507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24109-25767:-1:exon

GFD27_RS22655
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
gene: tnpB
locus tag: GFD27_RS22655
old locus tag: RFYW14_04583
so part of: sequence
location: complement(25813..26160)
location: region:25813-26160:-1
so has part: feature:25813-26160:-1:exon
subclass of: SO_0000010

position:25813:-1
position: 25813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26160:-1
position: 26160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25813-26160:-1:exon

GFD27_RS22655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
gene: tnpB
locus tag: GFD27_RS22655
old locus tag: RFYW14_04583
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIPVPGGVKVWLATGYTDMRKGFPGLSLMVQETLKRDPMCGHLFVFRGRGGGLIKVIWHDSQGACLFTKKLERGRFVWPSVADGTVVITPGQLGYLLEGIDWRMPQKTWRPTSVG
SIO_010081: GFD27_RS22655
subclass of: SO_0000673
so part of: GFD27_RS22655
location: complement(25813..26160)
location: region:25813-26160:-1
so has part: feature:25813-26160:-1:exon

WP_077549229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25813-26160:-1:exon

GFD27_RS22660
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22660
old locus tag: RFYW14_04584
so part of: sequence
location: complement(26157..26567)
location: region:26157-26567:-1
so has part: feature:26157-26567:-1:exon
subclass of: SO_0000010

position:26157:-1
position: 26157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26567:-1
position: 26567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26157-26567:-1:exon

GFD27_RS22660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22660
old locus tag: RFYW14_04584
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTKHPIEVITSVERRRRWSREEKERLVAACFEPGAVISEVARAAGIHVSQLFRWRKELCRIEEPSMQVSSTLVPLIVSETAPAAQSAAPETPVPPPPRRKRSDVTIELGRGRRVRVDSDIDTEALGRILDCVLGRR
SIO_010081: GFD27_RS22660
subclass of: SO_0000673
so part of: GFD27_RS22660
location: complement(26157..26567)
location: region:26157-26567:-1
so has part: feature:26157-26567:-1:exon

WP_152338506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26157-26567:-1:exon

GFD27_RS22670
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22670
so part of: sequence
location: 27479..27769
location: region:27479-27769:1
so has part: feature:27479-27769:1:exon
subclass of: SO_0000010

position:27479:1
position: 27479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27769:1
position: 27769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27479-27769:1:exon

GFD27_RS22670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22670
inference: COORDINATES: protein motif:HMM:NF015513.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MPDDVRISGPVMLVLSALGATRNGICGNEILLTTGLDSGSLDPVLTQLERDGWVESDWEDIDPSELERPKRRLYALSDLGRSKTEQLLANLFQFAG
SIO_010081: GFD27_RS22670
subclass of: SO_0000673
so part of: GFD27_RS22670
location: 27479..27769
location: region:27479-27769:1
so has part: feature:27479-27769:1:exon

WP_172977955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27479-27769:1:exon

GFD27_RS22675
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22675
so part of: sequence
location: 27775..27939
location: region:27775-27939:1
so has part: feature:27775-27939:1:exon
subclass of: SO_0000010

position:27775:1
position: 27775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27939:1
position: 27939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27775-27939:1:exon

GFD27_RS22675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22675
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTWFNMAISIAILCATVTLLVVALIRGGAKKEGLSQKFLDDEQAKALREWDEAR
SIO_010081: GFD27_RS22675
subclass of: SO_0000673
so part of: GFD27_RS22675
location: 27775..27939
location: region:27775-27939:1
so has part: feature:27775-27939:1:exon

WP_172977956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27775-27939:1:exon

GFD27_RS23315
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS23315
pseudo: true
so part of: sequence
location: complement(<27955..>28210)
location: region:27955-28210:-1
so has part: feature:27955-28210:-1:exon
subclass of: SO_0000010

position:27955:-1
position: 27955
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:28210:-1
position: 28210
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27955-28210:-1:exon

GFD27_RS23315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS23315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012606012.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: GFD27_RS23315
subclass of: SO_0000673
so part of: GFD27_RS23315
location: complement(<27955..>28210)
location: region:27955-28210:-1
so has part: feature:27955-28210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27955-28210:-1:exon

GFD27_RS22685
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22685
old locus tag: RFYW14_04586
so part of: sequence
location: 28524..30215
location: region:28524-30215:1
so has part: feature:28524-30215:1:exon
subclass of: SO_0000010

position:28524:1
position: 28524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30215:1
position: 30215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28524-30215:1:exon

GFD27_RS22685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22685
old locus tag: RFYW14_04586
inference: COORDINATES: protein motif:HMM:NF013080.2
GO function: GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfatase-like hydrolase/transferase
translation: MSIKLMRRLLDLTINPFLVAATGIGAIAFLLVTEDDFASAAFAVTAVAVVIGVLLLASRRPAFSVYSAITLTLLVVAPSVVKARLTGASLHALDLAHLADPKVSSFLVTGYASYVLPILAVLVMAILFLVMVYRYETPRQVGLVRRATLVVLPALLLPVALPQWASGDDYQFAGKHASAFTASLRELPHLWDEHPLMVRLAKTPPQPVYELPLTCTGAAVMPDIVLVHAESQLPPGDVPSWGTDMLSDSFKSGDDKLRRFGVETYGGSSWVTVSSVMSGLSGADFDWMRQFISASMTGKVDDAVPAVLASCGYDTAGVLTFGYDQFDLGPFLASTGIAKVSGAEETGIPVHGERDIRYYDAALDALHSGRNGGRPQFVYVETMFTHSPYDARQEAHAVFDGEPFHSDPETAEYLRRLVIARQDIEALREQLERNPGPRGTILVEYGDHRPLVAPAAPSKDGKGGLADWRSKDYETYFAVHAYGPAALPAIPDHARLDATYLGYWIVEAAGAATGGVVSDMEALRRHCDGLFHTCSDRAAVDRVLRRRLDADNVRFDPLMNPSS
SIO_010081: GFD27_RS22685
subclass of: SO_0000673
so part of: GFD27_RS22685
location: 28524..30215
location: region:28524-30215:1
so has part: feature:28524-30215:1:exon

WP_077546297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28524-30215:1:exon

GFD27_RS22690
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22690
old locus tag: RFYW14_04587
so part of: sequence
location: 30352..30744
location: region:30352-30744:1
so has part: feature:30352-30744:1:exon
subclass of: SO_0000010

position:30352:1
position: 30352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30744:1
position: 30744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30352-30744:1:exon

GFD27_RS22690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22690
old locus tag: RFYW14_04587
EC number: 2.7.1.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013066393.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004143 - diacylglycerol kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]; GO:0008654 - phospholipid biosynthetic process [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diacylglycerol kinase
translation: MQQPTDRTFRLPPRRTGLAHAFDAARYSLNGMRRLFAESAFRQELLAALGVFGLFALAALPAHAFLIQFVLFCLLFAVEALNTAIEVIVDRVSPEYSSFAKDGKDLGSVAVFALLVANGATAAWFLSSAF
SIO_010081: GFD27_RS22690
subclass of: SO_0000673
so part of: GFD27_RS22690
location: 30352..30744
location: region:30352-30744:1
so has part: feature:30352-30744:1:exon

WP_077546298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30352-30744:1:exon

GFD27_RS22695
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22695
old locus tag: RFYW14_04588
so part of: sequence
location: 31299..32495
location: region:31299-32495:1
so has part: feature:31299-32495:1:exon
subclass of: SO_0000010

position:31299:1
position: 31299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32495:1
position: 32495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31299-32495:1:exon

GFD27_RS22695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22695
old locus tag: RFYW14_04588
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012497740.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MPSTDNQHPIRVLFLQTQAELAGAQEISRILAEQLSEISLNGKLIFETHHVFLYRKTSGCDHFQNVHFAALERPSSLHSGLELIKTLAKIMREVRPDVLLTFQHYGNIVGAPLGRIFGVPQIIANHVSAPLTIKGPVRLLDRLLGLFGAYDVITVNSAATWNDYKTYPMRYRRRLIHVPHGFTPRSGTLSKKEAKRALGVTEFGPLIGTVARLHPLKQIDLAIRTLPILANVNLVVAGQGPDAERLSRVAEDLGVRDRVHFVGEIAPEEIGTFLAALDLFVFPSAAETFGLAAVEAAQAGIPVVANDLAVLREVLEWDQHPCALFVDTADTASFAQAINELLSDQQLRDELARRGRQLSERYSVDTMVKGYLRLILGAHSLKKRLNPDELKQHELWHE
SIO_010081: GFD27_RS22695
subclass of: SO_0000673
so part of: GFD27_RS22695
location: 31299..32495
location: region:31299-32495:1
so has part: feature:31299-32495:1:exon

WP_077546299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31299-32495:1:exon

GFD27_RS22700
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22700
old locus tag: RFYW14_04589
so part of: sequence
location: 32488..34059
location: region:32488-34059:1
so has part: feature:32488-34059:1:exon
subclass of: SO_0000010

position:32488:1
position: 32488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34059:1
position: 34059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32488-34059:1:exon

GFD27_RS22700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22700
old locus tag: RFYW14_04589
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRGHPLSILMIADVGSLSAFVPALASAFTRELRAHVRLQLQSSPADAAQTALATLLSLEKMLLRRNRPCWADRIAPSSLREWTSHKADVPISLIVDLTSKHQDHDLPVLRPVFNGGFGEEALASSVFFSGTPKIEITLRRTASNLPVVLCEGTASLEAATGVGGAMEAVWSRAAMLMVQAIRNRLSVDRHEPLHTAGSSPAPLSMPAVLRYSISAVAKAAAQAAYTLCCHRGHWRIGWRFADTSNDVWSHRSLAGVRWNVLQDPIDHFYADPFPVFWHGKDYIFFEDLDHKTGKGIISVVEFDSSGRPGTAVPVLEEPWHLSYPFMIEAEGELWMIPEASQSGQVTVYRAANFPWSWEPHAVLVSGTEAADATIANYGGRLWMFAVVRNGFGGYSDALSLWSADQLLGDWHPHEMNPVLIDDRLARPAGAMVVRDGHLMRPVQDCRNGYGAALSLARVTMLNDSSFKQVVETVLVPGTKAWPGHKVHTLNSSGRLEAIDGGVLRPRFPIATEVAKYIYRPQG
SIO_010081: GFD27_RS22700
subclass of: SO_0000673
so part of: GFD27_RS22700
location: 32488..34059
location: region:32488-34059:1
so has part: feature:32488-34059:1:exon

WP_077546300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32488-34059:1:exon

GFD27_RS22705
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22705
old locus tag: RFYW14_04590
so part of: sequence
location: complement(34188..35300)
location: region:34188-35300:-1
so has part: feature:34188-35300:-1:exon
subclass of: SO_0000010

position:34188:-1
position: 34188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35300:-1
position: 35300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34188-35300:-1:exon

GFD27_RS22705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22705
old locus tag: RFYW14_04590
inference: COORDINATES: protein motif:HMM:NF024871.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MLMLNCQTDILELKLEVEPEFDFLSPEYHELYSHSNATAFQAPLWMGMLNQKLAPRLSAKQYTITARRVGGGQLVAVMPLVIQRVRGVAMILPADFGLCDYNAVVANNAVLDRLARNPENLKRIAELVGEADLVMFRKVRADSFDVRRLFPKGMMSISEHAAYRCDFGSDLDAWRRTLAKSISNRLPRQYRQVEQQFGPYEHRRVRDETGIRDAFAFLKRVREGRFEGDLIEDPLYYDFYLEYAIASAGSGEAGLYVGYIDGQPVSFLFGLMGGRHFHAVQLGADRDRYSKYSVGNQIYYYAMQAQFNEGQTMLDMGIGDTGYKSDFRAVQIPMCNFTSANTLKGAAIATVYHRVKPLKNMLRQLAPRLH
SIO_010081: GFD27_RS22705
subclass of: SO_0000673
so part of: GFD27_RS22705
location: complement(34188..35300)
location: region:34188-35300:-1
so has part: feature:34188-35300:-1:exon

WP_077546301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34188-35300:-1:exon

GFD27_RS22710
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22710
old locus tag: RFYW14_04591
so part of: sequence
location: 35782..36858
location: region:35782-36858:1
so has part: feature:35782-36858:1:exon
subclass of: SO_0000010

position:35782:1
position: 35782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36858:1
position: 36858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35782-36858:1:exon

GFD27_RS22710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22710
old locus tag: RFYW14_04591
inference: COORDINATES: protein motif:HMM:NF024871.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MLEVVDTQERLEEIRFAWDALVKRSYSSLLDHNWIASSAKAFSAIATPAIYLLWQGDQIRAAAPLGLFREGLNYRLRFIGYLLREPNGLLFSDEGALQELVTHLFNQGRPLALARLPSGAAEEKVLRATCPRSSLMIRAKGGFTHTARLPSSVDALETEMSANVRSTLRRKLKRARKLGEVTFTVQSPDAENVGGLIDELIRIEGGGWKGRRGTAIACDATLRVFYHEFSARAAANGRLRIYRMAIDGATIAIRLGVVADNALYELKIAFDEQFRELSPGLLLTHETLKLEIAEGLTRHEFLGMAEDWQKHWPLERKEQASFRSYPLDMRGAMAIGHDVYDKVRRRYSAAVTTAIDRN
SIO_010081: GFD27_RS22710
subclass of: SO_0000673
so part of: GFD27_RS22710
location: 35782..36858
location: region:35782-36858:1
so has part: feature:35782-36858:1:exon

WP_172977957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35782-36858:1:exon

GFD27_RS23320
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS23320
pseudo: true
so part of: sequence
location: <36912..>37176
location: region:36912-37176:1
so has part: feature:36912-37176:1:exon
subclass of: SO_0000010

position:36912:1
position: 36912
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:37176:1
position: 37176
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36912-37176:1:exon

GFD27_RS23320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS23320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611421.1
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5/IS1182 family transposase
SIO_010081: GFD27_RS23320
subclass of: SO_0000673
so part of: GFD27_RS23320
location: <36912..>37176
location: region:36912-37176:1
so has part: feature:36912-37176:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36912-37176:1:exon

GFD27_RS22715
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22715
old locus tag: RFYW14_04592
so part of: sequence
location: complement(37184..37942)
location: region:37184-37942:-1
so has part: feature:37184-37942:-1:exon
subclass of: SO_0000010

position:37184:-1
position: 37184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37942:-1
position: 37942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37184-37942:-1:exon

GFD27_RS22715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22715
old locus tag: RFYW14_04592
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007801588.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
GO process: GO:0043163 - cell envelope organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WecB/TagA/CpsF family glycosyltransferase
translation: MNLWPRSVVGGLPIVKTTIDETADGFITQAVWARGKNIRPFYSTSANGQVLALCIRNPACSNLILEADQIHADGMPMVHYSKLFCNLPLPERVATTDLVHAVAQRAQETSVSFYFLGGSEAVNAAAVATMRRLYPNLTFAGRRNGYFNQEEEVEVVAEIRAARPDILWIGLGFPLEQLFLRRHLNSLQGIGLVKTSGGLFDFLSGKNPRAPEWMQRIGLEWVYRMVNEPRRLTLRYLITNPLAVYALLRYSR
SIO_010081: GFD27_RS22715
subclass of: SO_0000673
so part of: GFD27_RS22715
location: complement(37184..37942)
location: region:37184-37942:-1
so has part: feature:37184-37942:-1:exon

WP_077546303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37184-37942:-1:exon

GFD27_RS22720
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22720
old locus tag: RFYW14_04593
so part of: sequence
location: complement(38197..39774)
location: region:38197-39774:-1
so has part: feature:38197-39774:-1:exon
subclass of: SO_0000010

position:38197:-1
position: 38197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39774:-1
position: 39774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38197-39774:-1:exon

GFD27_RS22720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22720
old locus tag: RFYW14_04593
inference: COORDINATES: protein motif:HMM:NF014732.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GumC family protein
translation: MASYLNAVRVKVNVPAEATRQIPTLPEQGLSNYLQIDLRRLYYWLRTKFRWILACALGGMFLGVIFNVITPPRYTVTSEVLIDPAGLQIVSDDLYERADQREALLLNADSKLQTLLSRNVLARVIDRLDLTDDREFVPAPGFQLLPFRSEEPPSIDPAIIALEALQRRVSARRDQTSFVLIISVWSSDASKSIRISEALIEEFKAELTAADSDGAGRMTSSLIARLTELKLRVSEAEEAVEKFRRENDLRSSQGELASTRSMSQVDTQLREARQHLIAAQSRYNQMLAGGNDSHAMQSATLSALRTQYAMLRRQSDEFTNIYGPRHPRRISMQEALNSLRSEIDAELGRLTRAAENEYIQSRAIVEALEKEVKEVSTDVFTGNDAQIKLRELTREASARSAVYEAFLARARLTAERQQVDTTNIRVISAPIAPSNRSWPPSLPQATLFGFTVGFTLGALGVLAFGIAADIYAPTKPVPAYAEPREPEPPPAQKKMPGSLLSLLPQSPHPGVADRVGDRPWDERHA
SIO_010081: GFD27_RS22720
subclass of: SO_0000673
so part of: GFD27_RS22720
location: complement(38197..39774)
location: region:38197-39774:-1
so has part: feature:38197-39774:-1:exon

WP_172977958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38197-39774:-1:exon

GFD27_RS22725
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22725
old locus tag: RFYW14_04594
so part of: sequence
location: 39920..41170
location: region:39920-41170:1
so has part: feature:39920-41170:1:exon
subclass of: SO_0000010

position:39920:1
position: 39920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41170:1
position: 41170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39920-41170:1:exon

GFD27_RS22725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22725
old locus tag: RFYW14_04594
inference: COORDINATES: protein motif:HMM:NF016800.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: O-antigen ligase family protein
translation: MRLRLIALTFYLLVLLSIWSPTEELPSWIEFARYVIFLLLSGTIIISTFSLTGMRTPKGIEAELVALFVIYFGISAFWGAQHPDSYIKSLLLLNAGLTSVAIAVALPLEQTLRIIFLGLVTLMILSLITIVFFPGTGIENSWKHAGKWRGIVGQKNGFGTLAAFSFVAAVALPLKHRTSPSHQWLSLVGRIGFALLSLISLYMAGSRGSLLISAIGIISLLISQMPKIVQRAALVGAVVITLPLFNIVLSTIEVDADKVGVAGVVVDTDSRIKLWRFGFEQMAERELFGVGLASFWTEERKTQFSDANGWVLDNFHNGYITVLVETGVIGLLLYLFAFGALYLLLIVSIGAIRDRYLALVFAYTNMFTVINLVENEIGRSTSLLIFIFLIIAFSLREHVRQQLAARTSLTVLTPHH
SIO_010081: GFD27_RS22725
subclass of: SO_0000673
so part of: GFD27_RS22725
location: 39920..41170
location: region:39920-41170:1
so has part: feature:39920-41170:1:exon

WP_077546305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39920-41170:1:exon

GFD27_RS22730
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22730
old locus tag: RFYW14_04595
so part of: sequence
location: complement(41126..42241)
location: region:41126-42241:-1
so has part: feature:41126-42241:-1:exon
subclass of: SO_0000010

position:41126:-1
position: 41126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42241:-1
position: 42241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41126-42241:-1:exon

GFD27_RS22730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22730
old locus tag: RFYW14_04595
EC number: 2.3.-.-
inference: COORDINATES: protein motif:HMM:NF013884.2
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MKQSASYHPALDGIRAVCVVFTVAAHVKDTPWFINGSVGVDVFFALSGWLITTLLLDEWNEHGRLDLRAFYVRRFFRIIPLYALTISLYGAAAVTLSVVLGNTAEVDNFLSGFVYFSTFNGEYMNHQDGLLFGHSWTLGIEEKFYVLWPLLLPLLILGKRLAIPFLFLSICLLMVPAFAWGLLLRGYAGLGFGAMAAFMAWRSPACRQSLKGSATQPVTLALVLGAYLLSLIQPHPFLWNIAISMSAALFIGSIWLSGGTTRIKAVLEFNPFVRAGRLTYAVYLTHVLVINVVVLILSRFTDDPNWALSFALSYSFSLALGVFLNRLIERPFINFGRKLARGSRDSFPLRDGSKGFMLMMRRKDRQRGARS
SIO_010081: GFD27_RS22730
subclass of: SO_0000673
so part of: GFD27_RS22730
location: complement(41126..42241)
location: region:41126-42241:-1
so has part: feature:41126-42241:-1:exon

WP_172977959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41126-42241:-1:exon

GFD27_RS22735
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22735
old locus tag: RFYW14_04596
so part of: sequence
location: complement(42395..43663)
location: region:42395-43663:-1
so has part: feature:42395-43663:-1:exon
subclass of: SO_0000010

position:42395:-1
position: 42395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43663:-1
position: 43663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42395-43663:-1:exon

GFD27_RS22735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22735
old locus tag: RFYW14_04596
inference: COORDINATES: protein motif:HMM:NF014051.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide biosynthesis protein
translation: MIAIKSVIMVLNFTLVALAARGLGSTDFGHYSVLFSAGGLLLIIGTAGQELFVIRAWNEFRSAHDTAGAKGALHFSGLLVLTASCAVGILFLPWASAAYGTREAILVTTFVILASGLQVTSHFVRTAVGVTAGDGVGNVLQIAPAVLYLAASLAWHWQPSLIGIFSFLAAGTFCALLTHLIIARSVIRQRLSEWKKTTPRIETREWLKRSARLFGASSVEAVNQYADVLVLGLLVSPTIAGAYFVIARIANLFAAAADAINLFTTQHFSRLYHDTHPEKLEGHLDIVAKITLAFVVIGLLAVALVGYFILLMINETYISFYPELLVLCIATAALAMARPTGSILMLMGFEGSYLATIAVSATVRIIGILILTPDLGVMGAVAVTAVTHVLTAAALYRIAYQTTGLNLSFLRLTRGLSNLERA
SIO_010081: GFD27_RS22735
subclass of: SO_0000673
so part of: GFD27_RS22735
location: complement(42395..43663)
location: region:42395-43663:-1
so has part: feature:42395-43663:-1:exon

WP_172977960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42395-43663:-1:exon

GFD27_RS22740
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22740
so part of: sequence
location: complement(44908..45210)
location: region:44908-45210:-1
so has part: feature:44908-45210:-1:exon
subclass of: SO_0000010

position:44908:-1
position: 44908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45210:-1
position: 45210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44908-45210:-1:exon

GFD27_RS22740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22740
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDINEKALDALGKAYTELLARQLISERAIQCLIRRMLHGAPDDVKEKELYSYFQAIRSAAAAHIGSSSFTNDEAIATIDKAIAVFEHDTRTAQQLPQNS
SIO_010081: GFD27_RS22740
subclass of: SO_0000673
so part of: GFD27_RS22740
location: complement(44908..45210)
location: region:44908-45210:-1
so has part: feature:44908-45210:-1:exon

WP_077546309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44908-45210:-1:exon

GFD27_RS22745
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22745
old locus tag: RFYW14_04598
so part of: sequence
location: complement(45414..45923)
location: region:45414-45923:-1
so has part: feature:45414-45923:-1:exon
subclass of: SO_0000010

position:45414:-1
position: 45414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45923:-1
position: 45923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45414-45923:-1:exon

GFD27_RS22745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22745
old locus tag: RFYW14_04598
inference: COORDINATES: protein motif:HMM:NF025292.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipocalin-like domain-containing protein
translation: MERRSTVFAASAMALIAASQAAQAGDGKTLREQVVGTWSLVSLTVHQPDKKVELFGENPRGIQIMDPNGRFVNFITCSSLPLYAGNNRMQGTAEEYSAIGKGSNALYGTYDVDEEAKTVTFNVEVSTFPNWEGEKQRRESTVEGDTWRYTNPMTTIGEGRVEVVWRRLD
SIO_010081: GFD27_RS22745
subclass of: SO_0000673
so part of: GFD27_RS22745
location: complement(45414..45923)
location: region:45414-45923:-1
so has part: feature:45414-45923:-1:exon

WP_077546310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45414-45923:-1:exon

GFD27_RS22750
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22750
old locus tag: RFYW14_04599
so part of: sequence
location: 46055..47710
location: region:46055-47710:1
so has part: feature:46055-47710:1:exon
subclass of: SO_0000010

position:46055:1
position: 46055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47710:1
position: 47710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46055-47710:1:exon

GFD27_RS22750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22750
old locus tag: RFYW14_04599
inference: COORDINATES: protein motif:HMM:NF012698.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MTTPKRYRFGSFVLDLERMALIDDGTQIELRPKAFDTLRVLVERAGCLVTKDELVAAVWPDVIVNDDALAQCVRDVRKALRDTEQRIIETVPRRGYLFAAKIEDGSGSSDPQSAPITTGDHRRLTFVAALTAVVALLVTLGWYGFARKAETTIAQDRRPSIAVLPFRASTESDADAWLGEGVADDIIMALSRFRDIAVISRNSSFRFNDGEDLATIRDRVKADFLLQGSLRRTGDKLRLAVQLVDLETGVNRWAERFDRPWSHVFDIQEAVARDVAAQLATQARDAAVVRSQGMPPAVLDAYDLVLRGRKAYLSFSRPGALEGLDLVRRAVAVDPSYAVAWELLAQLLIQFFIQPYDERQGDPVVMAEARAALTKAVQLDPYYSTARAGLGAIIAREGDFDTSLKELREALRLNPNDASTLKVHADILSRAGHHEESLTTWNEVARLDPVGTPLDAALKSRAEFFMGYNEAALASARRCAALAPRLQPCLLYLTIAASAAGQPEEAKAAAQRLLELNPDISIARHFAIIPFRNPTDVEKMASYLRAAGLPE
SIO_010081: GFD27_RS22750
subclass of: SO_0000673
so part of: GFD27_RS22750
location: 46055..47710
location: region:46055-47710:1
so has part: feature:46055-47710:1:exon

WP_172977961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46055-47710:1:exon

GFD27_RS22755
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22755
old locus tag: RFYW14_04600
pseudo: true
so part of: sequence
location: 47913..>48335
location: region:47913-48335:1
so has part: feature:47913-48335:1:exon
subclass of: SO_0000010

position:47913:1
position: 47913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48335:1
position: 48335
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47913-48335:1:exon

GFD27_RS22755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22755
old locus tag: RFYW14_04600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003574557.1
GO function: GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: nucleotidyltransferase domain-containing protein
SIO_010081: GFD27_RS22755
subclass of: SO_0000673
so part of: GFD27_RS22755
location: 47913..>48335
location: region:47913-48335:1
so has part: feature:47913-48335:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47913-48335:1:exon

GFD27_RS22760
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22760
old locus tag: RFYW14_04601
so part of: sequence
location: complement(48410..49761)
location: region:48410-49761:-1
so has part: feature:48410-49761:-1:exon
subclass of: SO_0000010

position:48410:-1
position: 48410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49761:-1
position: 49761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48410-49761:-1:exon

GFD27_RS22760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22760
old locus tag: RFYW14_04601
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611865.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MRQKTGPQTSSAEKTIKDIRRATRKHHSSEEKIRIVLEGLRGEDSIAAICRREGIAESLYYSWSKEFLEAGKKRLAGDTARSATSDEVKALRRESRDLKEALADLTLENRLLKKKHDRGWGRRRMRYPATEKLEIIRLVEGSHLPARQTLDKLGIPRPTFYRWYDRFQTHGVEGLEDRTSAPSRVWNRIPDDIRDRIITLALDHADLSPRELAVKFTDMESYFVSEASVYRLLKAHDLITSPAYIVIKANDEFKDKTTRPNEMWQTDFTYLKVIGWGWFYLSTILDDYSRYIIAWKLCTSMKVEDVTDTLDLALAASGCDKVKVEHRPRLLSDNGPCYVASDLGEWLDKYKIDQVHGAPGHPQTQGKIERWHQTLKSRILLENYFFQEDLEAQIAAFVEHYNHRRYHESLENLTPADVYFGRGQTILLERERIKRDTIRQRRLNHQAKAA
SIO_010081: GFD27_RS22760
subclass of: SO_0000673
so part of: GFD27_RS22760
location: complement(join(48410..49425,49425..49761))
location: region:48410-49761:-1
so has part: feature:49425-49761:-1:exon
so has part: feature:48410-49425:-1:exon

WP_152338390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49425-49761:-1:exon

position:49425:-1
position: 49425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48410-49425:-1:exon

GFD27_RS22765
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22765
old locus tag: RFYW14_04603
pseudo: true
so part of: sequence
location: <49851..50348
location: region:49851-50348:1
so has part: feature:49851-50348:1:exon
subclass of: SO_0000010

position:49851:1
position: 49851
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:50348:1
position: 50348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49851-50348:1:exon

GFD27_RS22765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22765
old locus tag: RFYW14_04603
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007773203.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: HEPN domain-containing protein
SIO_010081: GFD27_RS22765
subclass of: SO_0000673
so part of: GFD27_RS22765
location: <49851..50348
location: region:49851-50348:1
so has part: feature:49851-50348:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49851-50348:1:exon

GFD27_RS22770
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22770
old locus tag: RFYW14_04604
so part of: sequence
location: complement(50500..50709)
location: region:50500-50709:-1
so has part: feature:50500-50709:-1:exon
subclass of: SO_0000010

position:50500:-1
position: 50500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50709:-1
position: 50709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50500-50709:-1:exon

GFD27_RS22770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22770
old locus tag: RFYW14_04604
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPDDRYTMRQEENGTWTVFDTNLPPSSENRIMYGITHERARQYVEHLNKARPKDEVEDYSSQPPTEDID
SIO_010081: GFD27_RS22770
subclass of: SO_0000673
so part of: GFD27_RS22770
location: complement(50500..50709)
location: region:50500-50709:-1
so has part: feature:50500-50709:-1:exon

WP_077549183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50500-50709:-1:exon

GFD27_RS22775
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22775
old locus tag: RFYW14_04605
so part of: sequence
location: complement(50808..51914)
location: region:50808-51914:-1
so has part: feature:50808-51914:-1:exon
subclass of: SO_0000010

position:50808:-1
position: 50808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51914:-1
position: 51914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50808-51914:-1:exon

GFD27_RS22775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22775
old locus tag: RFYW14_04605
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011424107.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MRVLHFFKTYWPDTFGGVERTIHAIAKGCRSLGIEAQILSLSPKPAAEPFEFDGHRIIQVKQDLDIASTGLSLAAFQKFRELSHQADVVHFHFPWPFMDLVDLVTPARKPVVVTYHSDIVKQKLLLRLYSPLMHHFLRRSDRIVATSPNYLASSPVLSRYQNKVDVIPIGLDETEYPQSDPERLAHWRNRFPGSFFLFVGVLRYYKGIQFLIEAASKTHLPVVIVGGGGLEHELKKQVEREKLSNIHLLGALPDQDKTALLSLCRALVFPSHLRSEAFGLSLVEAAMAGKPMVSCEIGTGTSFVNLNGVTGLTVPPADPEGLGQAMQRLWTNQAEADRFGEAARHRYETVFTAQKMAQSYAKLYRTLG
SIO_010081: GFD27_RS22775
subclass of: SO_0000673
so part of: GFD27_RS22775
location: complement(50808..51914)
location: region:50808-51914:-1
so has part: feature:50808-51914:-1:exon

WP_077549182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50808-51914:-1:exon

GFD27_RS22780
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22780
old locus tag: RFYW14_04606
so part of: sequence
location: 52074..53231
location: region:52074-53231:1
so has part: feature:52074-53231:1:exon
subclass of: SO_0000010

position:52074:1
position: 52074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53231:1
position: 53231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52074-53231:1:exon

GFD27_RS22780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22780
old locus tag: RFYW14_04606
inference: COORDINATES: protein motif:HMM:NF025314.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4214 domain-containing protein
translation: MINLQKIYLAFFGRPADPEGLRYWDQQLKSGVPMAEVAEIISQGTEFEERFSGLSYTSVLEKMVQSLFGRSMEEELLLAYQARLAEGQATIATVIAEILSSAEGRDLSMLNEKVAAANLYTSSLEEVLEVQAYRGEDAADVARLFLRSVTDTHPATPEAVARAIQGLLNSGGGAQSPAPNGAEVNGVQHWLNAAITPHREVDGEKVLLIGSGSAEGFTVAKGSASQLELGLSVRDELGNPLLSQGYVKGHIAGFEEISSPSHILVSIASLGQQELEEFSFKLSIDTDPTDGVSWKHYYLEGEPDHGYAWSLDHNNDGKPNGDDDLIHETLAIVGEQGHFMILDRLPLPAEEGIFDIRLDALEGGFLVVEAAVRVHLIGHSEPLEW
SIO_010081: GFD27_RS22780
subclass of: SO_0000673
so part of: GFD27_RS22780
location: 52074..53231
location: region:52074-53231:1
so has part: feature:52074-53231:1:exon

WP_077549181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52074-53231:1:exon

GFD27_RS22785
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22785
old locus tag: RFYW14_04607
so part of: sequence
location: complement(53247..54227)
location: region:53247-54227:-1
so has part: feature:53247-54227:-1:exon
subclass of: SO_0000010

position:53247:-1
position: 53247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54227:-1
position: 54227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53247-54227:-1:exon

GFD27_RS22785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22785
old locus tag: RFYW14_04607
EC number: 4.2.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015318710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-mannose 4,6-dehydratase
translation: MTGSQHGDLIVSKRRLVVTGKGGFVGTALSKAASDAWSDTFDLIDFADPETGKSPDLRDPPALERAIAHAKPDALIHLAAVAAPRQAKEEPATAWQVNVMGTFHLAQSVLRHAPEARFIFAGSSEAYGATFNESSTPLSENAVLQPWSAYGATKAASDIMLRQMAKDGLRATIFRPFNHTGAGQSPTYVVPAFATQIARIEAGLQEPVLKVGNLEAKRDFLDVQDVVDAYLMAADCDELMDGLTLNLSTGSPVAISTLLTMLTDMATVPITVEVDPDRYLPNTIPIMSGNNAKAREALHWAPNVSLSQTLARTLDQARADLNNSSQ
SIO_010081: GFD27_RS22785
subclass of: SO_0000673
so part of: GFD27_RS22785
location: complement(53247..54227)
location: region:53247-54227:-1
so has part: feature:53247-54227:-1:exon

WP_139346322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53247-54227:-1:exon

GFD27_RS22790
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
gene: gmd
locus tag: GFD27_RS22790
old locus tag: RFYW14_04608
so part of: sequence
location: complement(54261..55238)
location: region:54261-55238:-1
so has part: feature:54261-55238:-1:exon
subclass of: SO_0000010

position:54261:-1
position: 54261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55238:-1
position: 55238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54261-55238:-1:exon

GFD27_RS22790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
gene: gmd
locus tag: GFD27_RS22790
old locus tag: RFYW14_04608
EC number: 4.2.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009210110.1
GO function: GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-mannose 4,6-dehydratase
translation: MSKTALITGITGQDGAYLAQLLLSKGYEVHGLARRSSSSDVNLSRLRWLGIEKDVRIVDGNLLDLSGLIRTVTAVKPDELYNLAAQSFVASSWQQPLLTGQVTALGVTNVLEAIRLVKPDTRFYQASSSEMYGLVQQPVQSETTPFYPRSPYAVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVSDSVARIKLGLAKELRLGNTSAQRDWGHAKDYVRAMWLMLQQDTPDDYVVATGRTSTVRTMCEIAFSHVGLNIEDHLVIDEALFRPAEVEILLGDPSKAKSKLGWETSVTMEDLIREMVDADLARYRKH
SIO_010081: GFD27_RS22790
subclass of: SO_0000673
so part of: GFD27_RS22790
location: complement(54261..55238)
location: region:54261-55238:-1
so has part: feature:54261-55238:-1:exon

WP_077549180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54261-55238:-1:exon

GFD27_RS22795
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22795
old locus tag: RFYW14_04610
so part of: sequence
location: 55616..57331
location: region:55616-57331:1
so has part: feature:55616-57331:1:exon
subclass of: SO_0000010

position:55616:1
position: 55616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57331:1
position: 57331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55616-57331:1:exon

GFD27_RS22795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22795
old locus tag: RFYW14_04610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007120947.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I secretion system permease/ATPase
translation: MKIENPFQLALKTYRSVLFSTIVFSVVINALMFVGPLYMLQVYDRVLHSRSEMTLIMLTLIAVAMLMVYGLLEWLRSRVLVRAGLRFDQMISNGVFTRVVTSTLKQPQARAEFALSDIDRLREFFTGSGLIAICDVPWVPIFLFVCFLFHPLIGWVATCGALIIFALAIANEFMTKKPLAEAAGHGQAAQHFSNSTLQNVEVIRALGMEKSLRGRWSAMHRSMLEKQANASDRAGGLLSTSKFVRMALQTLILGAGAYLAIAGEISPGAMIAASIMMGRALAPVDQVVGQWKQFVGARMAYRRLSEIFRQLPEEGERTALPAPTGNLTVEQLIVAPPGSRTPLIQGVSFAVKPGEAIAVVGPSGAGKSSLVRALVGVWQPLSGAIRLDGAELQHWDQDDLGRHLGYLPQSVELFAGTIAENIARFQEGVDAEEVINAAKLARAHQMIQNLPDGYDTQIGVGGRQISGGQRQRVGLARAIFGSPALIILDEPNSNLDSEGEEALAQAIAELKAQGKAIIVVSHKMSLVALADKTLVLAEGRMRAFGPTRDVLQPKPAVAPAPAQAQNNRSIA
SIO_010081: GFD27_RS22795
subclass of: SO_0000673
so part of: GFD27_RS22795
location: 55616..57331
location: region:55616-57331:1
so has part: feature:55616-57331:1:exon

WP_077549179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55616-57331:1:exon

GFD27_RS22800
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22800
old locus tag: RFYW14_04611
so part of: sequence
location: 57372..58682
location: region:57372-58682:1
so has part: feature:57372-58682:1:exon
subclass of: SO_0000010

position:57372:1
position: 57372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58682:1
position: 58682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57372-58682:1:exon

GFD27_RS22800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22800
old locus tag: RFYW14_04611
inference: COORDINATES: protein motif:HMM:TIGR01843.1
GO process: GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HlyD family type I secretion periplasmic adaptor subunit
translation: MTEAKKNKNFSPAPYITAGYVVVFLGVGVFGTWAATAPLASGVVAPGTLSVETNRKTIQHLEGGIISEILAKEGEIVEVGDLLVKLDPTQAYGNFTVLQTRVTLLEATQARLLAESVDAAEIEWPAGLSLDSNDPSVQAAVKLQQRLFKDRKLTKDGQVGIMKTRIEQLNEAVKGLQQQLSSVDKQIASMQSEIDRLTSGQKKGVIGENQLSQINRALLQLQGEHGEITAEIAKLRQTISETELQIVQIRQEFIERAGSELRDIRDQLAEVTERRNVARDVLNRTEVRAPVRGMVQNIQIHTTNGVIRPAEPILDIIPLDDDLIVSAKIRPIDIDSVHVDSEAEVRFSAFSSRTTPAIFGKLTVLSKDVILPQQQGQEPYYLARIEVADQNVPAEIRGRLLPGMPADVIVATGERTFADYMIRPLTDAFHKSMREK
SIO_010081: GFD27_RS22800
subclass of: SO_0000673
so part of: GFD27_RS22800
location: 57372..58682
location: region:57372-58682:1
so has part: feature:57372-58682:1:exon

WP_172977962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57372-58682:1:exon

GFD27_RS22805
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22805
old locus tag: RFYW14_04612
so part of: sequence
location: 58843..59787
location: region:58843-59787:1
so has part: feature:58843-59787:1:exon
subclass of: SO_0000010

position:58843:1
position: 58843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59787:1
position: 59787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58843-59787:1:exon

GFD27_RS22805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22805
old locus tag: RFYW14_04612
inference: COORDINATES: protein motif:HMM:NF025314.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4214 domain-containing protein
translation: MAIVEAYSSTNLVDPNSWFGDIVRATSTEIVISDGYRTAVYEGYGFSYIGYEVVGGTLTGYRDYYQGTLMNEAYNFALPAAAVSDYIDQNNLQGLFRTALNYDDVIYGSVYDDDLAGYDGYDVIYTGGGDDFVSGGYGIDTVVLRGYGNDYRLGTSGSDILIDRTDGTSYNTLNSVERIRFDNGTLAVDVAEGQNAGQAYRIYQAAFDRTPDAGGLRYWIDELDDGADLIDVASGFVGSAEFRSVYGYNPTDYEFVDRLYYNVLGRQGEDRGVDYWLDTLEDGASRAYVLAMFAESPENIVGTTPELSSGIWLG
SIO_010081: GFD27_RS22805
subclass of: SO_0000673
so part of: GFD27_RS22805
location: 58843..59787
location: region:58843-59787:1
so has part: feature:58843-59787:1:exon

WP_077549177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58843-59787:1:exon

GFD27_RS22810
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22810
old locus tag: RFYW14_04613
so part of: sequence
location: 60381..61496
location: region:60381-61496:1
so has part: feature:60381-61496:1:exon
subclass of: SO_0000010

position:60381:1
position: 60381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61496:1
position: 61496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60381-61496:1:exon

GFD27_RS22810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22810
old locus tag: RFYW14_04613
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWASASITDVSEEVSSVITDAAIGRRCWSDLCKLFTQAFPGSYAALLNQNFVRPEVNFAVSDGLEEEHINSFLGHYSLVNPWQRFWQHASNGAILVAERDDPARQYRGSEFYEDWMKAVGDFDAAVGLRLQVEDDQIIYLPVHFSEKLSPAYEPRLEAVMRNTRRSLTNALQLASYVQDTAQKVSAEAALAGLDHHIVFVVDENLKLHEANQRAVDAFSCRFPVTCRNGMIRFAVPSVTSQVLQRLRSKQRDLVGKLLMTAGVDKWVVGLNSLPRLCPEGPILSRPQFLIQIHKLSSSLERIDEDLLVAGFGLTPSELRLCRALAAGVLLADAAPLVQISYENARQKLKSIFKKLSVSSQADLKMVLRSMV
SIO_010081: GFD27_RS22810
subclass of: SO_0000673
so part of: GFD27_RS22810
location: 60381..61496
location: region:60381-61496:1
so has part: feature:60381-61496:1:exon

WP_077549176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60381-61496:1:exon

GFD27_RS22815
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22815
old locus tag: RFYW14_04614
so part of: sequence
location: complement(61657..64053)
location: region:61657-64053:-1
so has part: feature:61657-64053:-1:exon
subclass of: SO_0000010

position:61657:-1
position: 61657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64053:-1
position: 64053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61657-64053:-1:exon

GFD27_RS22815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22815
old locus tag: RFYW14_04614
inference: COORDINATES: protein motif:HMM:NF025314.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4214 domain-containing protein
translation: MATIQGVYLALFGRPADPAGLTYWNGVTGNGADLTAIRGLAQQPEYLDRFDNFTSAEIVTAIYQSLFGRDPEPEGLNFFVAELDSGRQSIETIAINILDGAQASDASTIANKLSVSSAFTAFLDAQDLSEIYVGNAAAEYGRRHLVSVTDDTRTVELALATVAALPAGVTTKFFGELSEQFTDGTLLLDTDNYLDSTTDDPDGMIVGGGADLVVDGDFTLRGDGGAVAVSGAGTTVSFSNWTSIAGGPGLSDESIFTIADDAQVTMRDGFSLGHRIVFTGNDGSQINDIGGNNTGILNIFTGGRLTIDGFANFASYFAQPDDLNDGTETSTAFVTVVGQGSVLDLRGEHASFATTRGGVSHLTIADGGAVLLASGGSFGDVDDDTTTLGGEAYVYVSGPGSRMVNSGVDGLGFGRGSGSHAFLDVSDGGLVSSAEFLGFGRDGGTAEVGLRGGSSIESVFVHLGARGGQGVMTIDGSTLLLAGEDAAGQGAYLTVGMNASTTGASEMLVTNGGDVIIDGEGSFSPGFRVGRDGGQGTIRVDGIGSTFTVTGDDPDTVNPDGASGASFSGIGRGAGSVGTFEVTNGGAFQNSATGTIDIGRDEANGTLLVDGNGSLFGSGDYLRIGHENGQGRVVVSNSGSLRTEDTLFDGEEDISIRESGELLVSQGASLRGDVGNRGLFSVQATSSSNGLEGDFRQSADGVLDFDIAGAAGSAALTISGQVFLDGEINIDMLAGHGLAAGAEVILLDAAQGLSVGSSFDVTFSGLDASLDAQVVIADGTATLLIGVAGAFADNFAVA
SIO_010081: GFD27_RS22815
subclass of: SO_0000673
so part of: GFD27_RS22815
location: complement(61657..64053)
location: region:61657-64053:-1
so has part: feature:61657-64053:-1:exon

WP_172977963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61657-64053:-1:exon

GFD27_RS22820
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22820
old locus tag: RFYW14_04615
so part of: sequence
location: complement(64575..65264)
location: region:64575-65264:-1
so has part: feature:64575-65264:-1:exon
subclass of: SO_0000010

position:64575:-1
position: 64575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65264:-1
position: 65264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64575-65264:-1:exon

GFD27_RS22820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22820
old locus tag: RFYW14_04615
inference: COORDINATES: protein motif:HMM:NF015437.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LuxR family transcriptional regulator
translation: MRAALADLGVTAFNYGAAQMKITEGPVIDRFWTNMEERWIQRYVVKRYHLLDRLVAAALVRVRPFTFSEIFSVPPDLPEQEEMETEFPYRNGVVVPIHSPFGRFGMLSAACDHPILDGGDAATSFIANVALLATTAHERAEQLSAVETASSIALTDREVECLRWSVFGKTSDEIAVILGLTERTVRKHITTAMDKLNVTNRVQAVSKALALGLVSFGYSTKMEPDPRFQ
SIO_010081: GFD27_RS22820
subclass of: SO_0000673
so part of: GFD27_RS22820
location: complement(64575..65264)
location: region:64575-65264:-1
so has part: feature:64575-65264:-1:exon

WP_172977964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64575-65264:-1:exon

GFD27_RS22825
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22825
old locus tag: RFYW14_04616
so part of: sequence
location: 65401..67737
location: region:65401-67737:1
so has part: feature:65401-67737:1:exon
subclass of: SO_0000010

position:65401:1
position: 65401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67737:1
position: 67737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65401-67737:1:exon

GFD27_RS22825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22825
old locus tag: RFYW14_04616
inference: COORDINATES: protein motif:HMM:TIGR01965.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4214 domain-containing protein
translation: MKLSKKEQDGFIALEGKKPMSSAAVEQLYMEILLRQPGAAESSYWVEQLAQGLSLSQVQQIFLDSDEGRLVNNVLLPLTAFYQGAFARAPDAAGLSYWAEKLTSGEIDLKGVLQAFGSSSEFRSLHPDIGDDVSPEELVSLLYQNLLGRSADAAGTAFWSDLLQSGQIDYAQLARSFLVSDEFQEAAGEALRSFIDDYRTDRDLDHDHGSLLEPDPPEIPRNPADGSGGDGGGNGGHGGGDDGGHGDGNGGEEPTEGPPKVTNDTADAHEAGLASGTDATGNVLNNDGDATFVTAINGNSNLVGQTIVGEFGTLTLQSDGQFRYIVDQDNLTVNDLKYGESLAETFTYSAQNDDYYEASASLTITILGSNERIERLSPTYDSTLGTGGGDSYDAAISDGGRYVAFTSQDSNVVQGDDNSQPDPFVWDREGNVQVFAKNGSFVGGSVAAISGNGLVVAFHTGNSLVGADEDNTYDPNDVTDVYLFNRQTETVELLLDDPTALDVSLSADARFVAFDSLKGGNFKDLDDAYDIFVLDRHDLSDPNDDTMEFISISANGSQAYGAASRDPVISGDGSFVAFESSDGTLAYENNEETDIFVFDRATHTLDLVSVSSNEAASNGTSRNATLSDDGRYVTFESVATNLAGTDSAAFYDIFLRDRVDGTTQRISVGLGGQDANGHSSGAVISADGRFVVFESDASNLVEGDTNSERDLFLFTVATGKLQRIVEGDSNYGTDYFAADISADGRYIAFHSENQLTPGDHDTAQDVHVIDGSEWWWTP
SIO_010081: GFD27_RS22825
subclass of: SO_0000673
so part of: GFD27_RS22825
location: 65401..67737
location: region:65401-67737:1
so has part: feature:65401-67737:1:exon

WP_077549173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65401-67737:1:exon

GFD27_RS22830
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22830
so part of: sequence
location: complement(67999..68301)
location: region:67999-68301:-1
so has part: feature:67999-68301:-1:exon
subclass of: SO_0000010

position:67999:-1
position: 67999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68301:-1
position: 68301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67999-68301:-1:exon

GFD27_RS22830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011387743.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAHIAPVLLVVALGASSASAKECSFPRNEPVQQSGKTEYLFLDTCGRPYEVGYRLDGNTLLFPRGGKHALPKADDASAEKVLRDAYGLVGERDKLIRTKF
SIO_010081: GFD27_RS22830
subclass of: SO_0000673
so part of: GFD27_RS22830
location: complement(67999..68301)
location: region:67999-68301:-1
so has part: feature:67999-68301:-1:exon

WP_077549172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67999-68301:-1:exon

GFD27_RS22835
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22835
old locus tag: RFYW14_04617
so part of: sequence
location: complement(68651..70627)
location: region:68651-70627:-1
so has part: feature:68651-70627:-1:exon
subclass of: SO_0000010

position:68651:-1
position: 68651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70627:-1
position: 70627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68651-70627:-1:exon

GFD27_RS22835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22835
old locus tag: RFYW14_04617
inference: COORDINATES: protein motif:HMM:NF020137.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4214 domain-containing protein
translation: MATAVNVQASGQSFIDPLLNRKAWAETLITFGFTTSADQYSTVYGVGETVQGYQPLNPNQISAAKAAMSLWGDLINVDFVQASGSTADIRIASSSMPKTAWAYAPGSSGEAGDVWLGTSAGYYTSPKAGNYGFHTLVHELGHALGLAHPHENKLGAGNYSAEDVTEGSLCPCCAGLMHGVVSKEEAVAVQAANDGSSTLNFGGNTSSNAYDAMAYSIMSYSSYVNDGRTGYKNGTWDYAQTPMLRDIAAIQHLYGANYTTRDGNTVYSWSEQTGEKSINGVGVGAPGANKVFEALWDGGGRDTIDLQSYKSDLKIDLAPGGWANFGNSQIANLGNGQSAPGNVAFAYLYQGDERSLLENAMGGSGDDIIKGNVASNVLVGGAGNDRLEGVAGNNVLAGGSIGRELSFLGLNKADWISATLKPVSADGNDTLIGGAGNDIFVAGAGSDTVQGGAGLNTLVIDASLSGIRISQVGSDLVFSYASGSARVSDIDYLSLEDGIYAIGGSDAVVTPDPQAGIKSDIALVYSAGLDREIDMPGLQYWTDIIDNGASLAYLASGIIASAEFGTRFGQPDQMDDAGFVNVLYQNVLDRAGEAEGVAYWTDAMSQGQSRADVLVAFSVSEENRANLPNPTQGYDGAIHLDGVDLVAISTQQWAEIWA
SIO_010081: GFD27_RS22835
subclass of: SO_0000673
so part of: GFD27_RS22835
location: complement(68651..70627)
location: region:68651-70627:-1
so has part: feature:68651-70627:-1:exon

WP_077549171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68651-70627:-1:exon

GFD27_RS22840
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22840
old locus tag: RFYW14_04618
so part of: sequence
location: 70905..72059
location: region:70905-72059:1
so has part: feature:70905-72059:1:exon
subclass of: SO_0000010

position:70905:1
position: 70905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72059:1
position: 72059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70905-72059:1:exon

GFD27_RS22840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22840
old locus tag: RFYW14_04618
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018988031.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 1 protein
translation: MKIILSVQPIRFPLTGIGRYTLELARHLPTVSGVEDLKFFGDSDFVPDLPSADDKASKPASLVTQLKHRLARNPLLLDFYRKRVHTRRGKALEGQGDYVYHGPNFYLPPFPGPSVVTIHDLSVFTMPERHPLERVMFVRKEVESALRQATILITPSQHARHEVAEYFNWPLEKVRNTALAGGSEFHPREEDAIAPVLARHNLTPRGYVLYTGTIEPRKNIVRLIDAYGQLPQNLKSHFPLVLAGFKGWNNEAEMARINLAEREGWLRYLGFVSDADLPVLFSGAKLFAFPSLYEGFGLPVLEAMASGVPVVTSNSSSLPEVAGDAAASCAPEDVDALAGLLQQGLEDEEWRAEAIRRGFLQAAKFSWKRCAEETAEIYRSALAC
SIO_010081: GFD27_RS22840
subclass of: SO_0000673
so part of: GFD27_RS22840
location: 70905..72059
location: region:70905-72059:1
so has part: feature:70905-72059:1:exon

WP_077549170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70905-72059:1:exon

GFD27_RS22845
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22845
old locus tag: RFYW14_04619
so part of: sequence
location: 72145..72945
location: region:72145-72945:1
so has part: feature:72145-72945:1:exon
subclass of: SO_0000010

position:72145:1
position: 72145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72945:1
position: 72945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72145-72945:1:exon

GFD27_RS22845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22845
old locus tag: RFYW14_04619
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014818909.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MNGRLAESTLWRYRYFILTSIQSDFRARVARSRLGMFWIVLAPLSQVVIYAFVLSSLMSQRLPGIETPFAYSIYLMAGFQAWFLFTEILTRCLNVFIENGNALKKISFPRMALPVIAVGAAILNNLIFFVLVIAAYLLVGYHPGWSLAWFPVLLLVTSALATGLGLVLGILNVFMRDVGQLVAILLQFGFWLTPIVYTIDILPERFQDIIRLNPMFWVVDNYHRVLAYGVAPNLIALGLVAGLAVILLWLALVLFRKASGEIVDVL
SIO_010081: GFD27_RS22845
subclass of: SO_0000673
so part of: GFD27_RS22845
location: 72145..72945
location: region:72145-72945:1
so has part: feature:72145-72945:1:exon

WP_077549169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72145-72945:1:exon

GFD27_RS22850
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22850
old locus tag: RFYW14_04620
so part of: sequence
location: 72942..74195
location: region:72942-74195:1
so has part: feature:72942-74195:1:exon
subclass of: SO_0000010

position:72942:1
position: 72942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74195:1
position: 74195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72942-74195:1:exon

GFD27_RS22850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22850
old locus tag: RFYW14_04620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016485365.1
GO function: GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MTQDPVLTVNGLGKVFRRYKRELHRVLNWFSFQFPPAEEHWVLRDISFEVRAGEALGIVGRNGAGKSTLLKMITGTTRPSEGGVHFKGRIAAILELGMGFNYDYTGRQNVYHASGLMGLQRSDMDAIMPELEAFAELGAYFDQPIRVYSSGMQVRLAFAVATAFRPDILIIDEALSVGDAYFQHKSFDKIKQFREQGTTLILVSHDRLALLSLCDRALLLDQGRLALDGDPESVLDYYNALLGRKEGDVIETSLQDDGRIQTISGSREATIETATLVNTQGEPIDTIEVGSEVEIRVVAKAHKAIPRLVLGYAIKDRLGQTMYGTNTHYSQQALDTLQAGETVEYSIRFPVALGPGTYSVALALSGAENHLGQNYEWRDLAIMFSVVNLREQAFDGKIFMPSSIEVRRSARPDHEDG
SIO_010081: GFD27_RS22850
subclass of: SO_0000673
so part of: GFD27_RS22850
location: 72942..74195
location: region:72942-74195:1
so has part: feature:72942-74195:1:exon

WP_077549168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72942-74195:1:exon

GFD27_RS22855
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22855
old locus tag: RFYW14_04621
so part of: sequence
location: complement(74180..75268)
location: region:74180-75268:-1
so has part: feature:74180-75268:-1:exon
subclass of: SO_0000010

position:74180:-1
position: 74180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75268:-1
position: 75268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74180-75268:-1:exon

GFD27_RS22855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22855
old locus tag: RFYW14_04621
EC number: 2.3.-.-
inference: COORDINATES: protein motif:HMM:NF013884.2
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyltransferase
translation: MKSRNIGYIPELDHLRLLAALLVFGFHFFHFNMGTWRSYPDQPHWGLITEGHTGVSLFFVLSGFIFMTIALENDEIRYGAFLRNRILRIAPLFLVVFIVAVSIGRDRFEATDVLYLLITNIGDAPTSWHFATGPAWSISVEFAFYLVFPFLALFTKERGSGFLVKALLLLLIIKLGAYLATDNSRHMLYSTLVGRFDQFLIGMLAAIAYARRRPVLERRARLFFAVAVVLVFLGAAVQARWLSYLSPEPKQPLGIIWGSVEASLWGLAVVSYLSARLPWPNWIGNLLAKGGERSFSLYMWHAMIIYIVHELVGPAGATGGLALAFHGIFVLTLALMFASLSFAIIEKPFLDMRRRYTDQPSS
SIO_010081: GFD27_RS22855
subclass of: SO_0000673
so part of: GFD27_RS22855
location: complement(74180..75268)
location: region:74180-75268:-1
so has part: feature:74180-75268:-1:exon

WP_077549167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74180-75268:-1:exon

GFD27_RS22860
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22860
old locus tag: RFYW14_04622
so part of: sequence
location: complement(75292..77691)
location: region:75292-77691:-1
so has part: feature:75292-77691:-1:exon
subclass of: SO_0000010

position:75292:-1
position: 75292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77691:-1
position: 77691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75292-77691:-1:exon

GFD27_RS22860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22860
old locus tag: RFYW14_04622
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012744.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKIAIVTPHPVPLAIGGAENLWWGLQDHFQNHTVHECDVIALLSPEASFWDLISSYEAFSKLDLSAYDCVISGKYPAWMVNHPNHICYMLHRLRGLYDTYAPPAEDHTVLRLPKLRNLVEWLDDAGRYPDPEQIPDLFDKLRSLKDAGLPESVFAFPGPFIRKIVHFLDNAALSPQRIRRYAAIAETVRQRKNYFPPDAMVDVLYPPPHRSDYREGDFRYLFTSSRLDRPKRVDLIVEAMKHVSEAIPLLIAGTGPDEARLKALAGNDQRIQFLGFVPDEAMSALYADALAVPFVPYDEDYGLVTIEAMRSGKPVLTFADSGGPCEFVHDGETGFVTAPSAKALAERISELARNPQLARQMGERAKGEVAPVIWDNAASGLLQSVPHATAERPARRKKLTVATTFRVFPPMNGGQARVYHLYKNLAKIFDIDIVSLGIATDLRSEKEIAPGLVEIHIPKSEAHAEAERDLSNLTGHIPIGDIAAYPLIGLTPAFDDALELSAMTSDAVVACHPYLIQALRKAAPDKPLWYEAQDVEITLKSAMFAGKPEGQPLLEEVKSAEKSCWISAERVFACADRDLKELQSIYGPTRARVYEVPNGVALDEIPFTDLQTRRHIQARSGLSGRQTAIFMGSWHGPNLEAIEEILQSAEQAPKTRFIVMGSACIPFKDRKKPTNVHLLGQVDETTRNSLLASADVALNPMHSGSGTNLKMLDYFAAGIPVVSTMFGARGLEVQPEIHFLASDAGLAATLDKLAQFDDMRLSSMIASARRLVEEHYSWKVIAERFADRLADSGFSLTRG
SIO_010081: GFD27_RS22860
subclass of: SO_0000673
so part of: GFD27_RS22860
location: complement(75292..77691)
location: region:75292-77691:-1
so has part: feature:75292-77691:-1:exon

WP_077549166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75292-77691:-1:exon

GFD27_RS22865
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22865
old locus tag: RFYW14_04623
so part of: sequence
location: complement(77688..78782)
location: region:77688-78782:-1
so has part: feature:77688-78782:-1:exon
subclass of: SO_0000010

position:77688:-1
position: 77688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78782:-1
position: 78782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77688-78782:-1:exon

GFD27_RS22865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22865
old locus tag: RFYW14_04623
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012744.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 4 protein
translation: MRVGIASVHTPGIYGGAEFLVDGLIEAVRAAGHSVHKISVPFYFEPMDAAAKTMDQCLATDFLPYGGGQIDRMICLKFPAYMIRHPDKRVWLLHQHRSAYDLYGTPYGWLPGKKDTDALRSRIIAEDNQSLAGGTPGSARAVYTIAERVCARLRQYNGIESKALYHPPADFEAFRCERALPYIFVPSRLEGLKRQDLMLKALAACRSPIQAIFAGTGSMRKHLEAMAEGLGLAERVRFVGAVSREEMLSLYAHATAVFFGPLDEDYGYVTLEAMLSSKPVVTCTDSGGPLEFVRDGETGMITTPEPEAIAEALETLTGNAAKAAELGRNGYARYQSMDITWSHVVDTLLADIPDLPTRAAGKLP
SIO_010081: GFD27_RS22865
subclass of: SO_0000673
so part of: GFD27_RS22865
location: complement(77688..78782)
location: region:77688-78782:-1
so has part: feature:77688-78782:-1:exon

WP_172977965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77688-78782:-1:exon

GFD27_RS22870
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22870
old locus tag: RFYW14_04624
so part of: sequence
location: complement(78782..80278)
location: region:78782-80278:-1
so has part: feature:78782-80278:-1:exon
subclass of: SO_0000010

position:80278:-1
position: 80278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78782-80278:-1:exon

GFD27_RS22870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22870
old locus tag: RFYW14_04624
inference: COORDINATES: protein motif:HMM:NF024880.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase domain-containing protein
translation: MDEKTAVRETPETIDEILARVRAELASVAPASGDLEDAAPLRRTQGVGAIPLVVEPDDSEVIPLGRPFYTIEEFAALDEDAFLRNAYRIVLGREMDAAGASYYLPALRGGHIGVVRVLSALRRSAEGREHGVRIRWLIPAAILDRLAGLPVVGKFFAPFMTFLVRSQTNRRLATVAQRHLEMIGSVNTSLSAVRKSNVHLENRITMAERGTAEYREFSLRAHEDAANALSEIKATRQLIAEESLQLRRLINEARAALPERSKVQDTVETLENHKFDSLYVAFENRFRGSTAEISKRSERYLPIFRHAPPVAAGGVVLDIGCGRGEWLSLLKRHNIATRGIDLNVSMVAEARSLGLDVIDGDAIAYLRDLPENSLAAVTGFHIVEHLTFKDLVALFDEARRALMPGGVILFETPNPENLVVGACTFNYDPTHNKPLPPDFLRFIAEVRGYEEARIIRSEADCDLSQPETGFAPDDVNDWFRQPPDYAVYARKPDNHGTE
SIO_010081: GFD27_RS22870
subclass of: SO_0000673
so part of: GFD27_RS22870
location: complement(78782..80278)
location: region:78782-80278:-1
so has part: feature:78782-80278:-1:exon

WP_077549164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78782-80278:-1:exon

GFD27_RS22875
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22875
old locus tag: RFYW14_04625
so part of: sequence
location: 80912..82936
location: region:80912-82936:1
so has part: feature:80912-82936:1:exon
subclass of: SO_0000010

position:80912:1
position: 80912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82936:1
position: 82936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80912-82936:1:exon

GFD27_RS22875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22875
old locus tag: RFYW14_04625
inference: COORDINATES: protein motif:HMM:NF037144.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ig-like domain-containing protein
translation: MASIQGIYVALFGRPADPAGLAYFNEVTNNGADLTAIGDLAGTAEYQDRFTGMTKEQVVNSIYQSLFGRDAEPGGLAHFVDGWNDGTYNINNIAIAILDGAKDGDLATVNAKIAAANLFTSQLDLALEVDSYEGDDAADIAREFIDSVTSSDPGTSVEADVAIARIVNLQNAGGPGQGGGGGGGGGGNGANISPISVNDGPYSVDEDSQTGASGNVLANDSDPNGDTITAVLVADAANGTVNLNSDGTFTYVPDADFNGTDTFTYKTNDGKADGDVATVTIDVAPVNDKPVFDPAGDYDLEVDENSAVDTVVGSVVATDDADGDTNITYSLKAPSTTFAISADGVITLIGATDHEAQDSYTITVVAEDSDGGTEEQDVVISIGDVNDAPVAEDDTASTNAGVAKDIDVLANDADQDASDTLEVSDVTQGASGTVVINVDGTINYTPNAGFMGEDTFSYTVTDGEDFDTATVTVTVTGDPNDFDELGQPGDNVISGSYSDYYANNTFYGGAGQDTLYGLGGNDTLYGGSGHDELFGDGTRFDFGNDILYGGSGDDMLLGSSGADKLYGGQGSDTFVYLRTGDSYNSNDNSQTRDIIYDFEIGKDKIDLSAIDAREGGGDQAFRFGGQSSTTADRDVTFQFVGGNTIVTANVENSSDVLQIVLIGQHQLSATDFVL
SIO_010081: GFD27_RS22875
subclass of: SO_0000673
so part of: GFD27_RS22875
location: 80912..82936
location: region:80912-82936:1
so has part: feature:80912-82936:1:exon

WP_077549163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80912-82936:1:exon

GFD27_RS22880
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22880
so part of: sequence
location: 83130..83330
location: region:83130-83330:1
so has part: feature:83130-83330:1:exon
subclass of: SO_0000010

position:83130:1
position: 83130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83330:1
position: 83330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83130-83330:1:exon

GFD27_RS22880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22880
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEDIMNLQPWRRARLRLRRSQPSFTYGGQYLTYFINGNILTATEISGGDKFIENLIIGEKASPIS
SIO_010081: GFD27_RS22880
subclass of: SO_0000673
so part of: GFD27_RS22880
location: 83130..83330
location: region:83130-83330:1
so has part: feature:83130-83330:1:exon

WP_139346320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83130-83330:1:exon

GFD27_RS22885
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22885
old locus tag: RFYW14_04626
so part of: sequence
location: complement(83641..85395)
location: region:83641-85395:-1
so has part: feature:83641-85395:-1:exon
subclass of: SO_0000010

position:83641:-1
position: 83641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85395:-1
position: 85395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83641-85395:-1:exon

GFD27_RS22885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22885
old locus tag: RFYW14_04626
inference: COORDINATES: protein motif:HMM:NF025314.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4214 domain-containing protein
translation: MATIQGIYIALFGRPADPLGLAYFEAETNGGADLTAIGDLAATAEYQNRFEGMSNVEIVNSIYQSLYGRDADLAGLTFFVNALQDGTYNINNIAIAILDGAQGNDAAILANKLEAANLFTASLDTGSEVVAYQGDDAAAAGRAFLSGVTSDDATVPTQAEVDAAVEAIVDASDDVGPGTPGSIFTLTDASNTTTGGVDNVVGTANDDNIRAISGGSLDSGDVINGGAGYDTLNISDDAYVANAAPVISGVERINNGESVALDLTDVSGVQQIWSSNAAGATYDNASLSTVFGTTVGGTIDIDIEASTAGNSDTLRLAVDDNNGTDAVFTSGTDAASIENIVIDAQGASGTSGTNATADDVVLTAFTGLETLTVTGAGNINIVAAAPAVAPAVPAITSLTTVDASAATGSVTVDASESTEDMTFTGGSGANDFTSGSGDDVLNGGAGNDTLDAGAGDDTLTLNGGDTATGGADEDVFNVSGGIALGAGNEITDFVLADDDAIEFGGAAGTTTNYAESTTTAGSFSEAREIASTEFAGNADLDYVAVWDGTDVHLFYNGGSGDDLVSAVTLTGAVTLATIDHTAII
SIO_010081: GFD27_RS22885
subclass of: SO_0000673
so part of: GFD27_RS22885
location: complement(83641..85395)
location: region:83641-85395:-1
so has part: feature:83641-85395:-1:exon

WP_077549162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83641-85395:-1:exon

GFD27_RS22890
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22890
old locus tag: RFYW14_04627
so part of: sequence
location: 85712..86068
location: region:85712-86068:1
so has part: feature:85712-86068:1:exon
subclass of: SO_0000010

position:85712:1
position: 85712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86068:1
position: 86068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85712-86068:1:exon

GFD27_RS22890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22890
old locus tag: RFYW14_04627
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008188390.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MRPAPSEQSRQQNEHLRVSVGQWLRDRRTSLGLSQRELADLAGFEYYTFISQLETGRGRVPAERYESYAKALQVDSREFAMRMLQAYENSTYKLLFPSEAMSDLERRLRALEAQVGKA
SIO_010081: GFD27_RS22890
subclass of: SO_0000673
so part of: GFD27_RS22890
location: 85712..86068
location: region:85712-86068:1
so has part: feature:85712-86068:1:exon

WP_077549161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85712-86068:1:exon

GFD27_RS22895
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22895
old locus tag: RFYW14_04628
so part of: sequence
location: 86145..87269
location: region:86145-87269:1
so has part: feature:86145-87269:1:exon
subclass of: SO_0000010

position:86145:1
position: 86145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87269:1
position: 87269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86145-87269:1:exon

GFD27_RS22895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22895
old locus tag: RFYW14_04628
inference: COORDINATES: protein motif:HMM:NF012630.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4214 domain-containing protein
translation: MSYVLEGPKWGNPGYGTSSGVITWSFAQLNWGGYEFDAIITDPAYQQGIRDALALWESVAQLDFHEVVDSASTMLRFGWDYIDGAYGTVGEASWSASSSDGTNYSITSAEIRFDTAETWSVRAGSGSSFFAVAVHEIGHALGLGHVDDPNQIMNPMLTDLQTLGPGDIAGMQILYGGRGFVATGGDDVFVLTSGNDVLDGLGGRDIAVMGGARTSFAITKSDDSLQVVGQGSDRLTSIERLVFTDGTLAFDFDGNAGQAYRIYQAAFDRTPDAGGLSYWIKSMDAGTSLADVAEGFVRSDEFTSIFGSNATDEAFVGGLYENILGREGEAAGISYWVEALEAGTSRATILYGFSESPENIVGTAPTIADGIWFA
SIO_010081: GFD27_RS22895
subclass of: SO_0000673
so part of: GFD27_RS22895
location: 86145..87269
location: region:86145-87269:1
so has part: feature:86145-87269:1:exon

WP_152338526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86145-87269:1:exon

GFD27_RS22900
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22900
old locus tag: RFYW14_04629
so part of: sequence
location: complement(87274..87696)
location: region:87274-87696:-1
so has part: feature:87274-87696:-1:exon
subclass of: SO_0000010

position:87274:-1
position: 87274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87696:-1
position: 87696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87274-87696:-1:exon

GFD27_RS22900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22900
old locus tag: RFYW14_04629
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004121588.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MucR family transcriptional regulator
translation: MEASVHNHDHKEHLAELTAGIVSAYLNKNVVSPAALVSLIESVQETLAKLDVPEDLPDSKRTSQANNVKKTVSREAITCLECGKHFKSLRRHLSVHHNLSPEEYRRKWALGSDYPMVAPAYAERRSQLARDMGLGGTSRR
SIO_010081: GFD27_RS22900
subclass of: SO_0000673
so part of: GFD27_RS22900
location: complement(87274..87696)
location: region:87274-87696:-1
so has part: feature:87274-87696:-1:exon

WP_077549160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87274-87696:-1:exon

GFD27_RS22905
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22905
old locus tag: RFYW14_04630
so part of: sequence
location: complement(87949..89379)
location: region:87949-89379:-1
so has part: feature:87949-89379:-1:exon
subclass of: SO_0000010

position:87949:-1
position: 87949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89379:-1
position: 89379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87949-89379:-1:exon

GFD27_RS22905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22905
old locus tag: RFYW14_04630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVLSFSSFSKKQTAAKGQDWSQQEIADFYRAHRLLAENGAAIGIDRGLTDIGEPWIVFYDLMTQDVFLHVGRIDGECILICEALGIRLKAATISDLVPRFEAAVRDHISVRAERQSNVVLHPAARVIMAISAVFLLSKIDGSGVAHAGEAEASEQASSTEDAGKKADAAAPLARAQTALARLFDTVDSPRAVASLAGAILTGELLIHLQPTAHQENPAGEANGVAIEVAHLPQAPDASLSEGKDASLDVSHIEAGIEKVPSATQVLVASSGAAVEQMQATYQKDQVSSEEKIVFSLPQVSGRSGDHFKDVVLASVAVPTANPVESVPTAGTDKDTPEAIDVLQSILGRSLKSTEEGTVTVGSAHTDVDKGVATIVPVAGLEISLSTLDKLDETVGFYMQTSLSDTGLHSMLSHFLASMSGYEIEYIGGRVLIEQQNTDGLAANDIGLWTNVLQDGSTISVIGQAALIDDIGGFLV
SIO_010081: GFD27_RS22905
subclass of: SO_0000673
so part of: GFD27_RS22905
location: complement(87949..89379)
location: region:87949-89379:-1
so has part: feature:87949-89379:-1:exon

WP_077548630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87949-89379:-1:exon

GFD27_RS22910
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22910
old locus tag: RFYW14_04631
so part of: sequence
location: 89581..90807
location: region:89581-90807:1
so has part: feature:89581-90807:1:exon
subclass of: SO_0000010

position:89581:1
position: 89581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90807:1
position: 90807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89581-90807:1:exon

GFD27_RS22910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22910
old locus tag: RFYW14_04631
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012029919.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MKRPKKLKMMSREDFAALSLHEKNAYLQELARQYAEVNDRDVAELDKDSLSRLRRYYSRRVWADLKLGEMDDDAISQSLRRLGEAIRNDSLRQDVEAVLKQESVPKRILRPAPAEDAQLTFFVPTVYDAPIKDDVNLMDVAPFSLSKRATSGVIRYELKDSLITIEGGAESGLATVFDYDIFLNMVTHLADEVQRYRREEKKGLRPSLPPKTYRPTASHILKFCRRSDGGKSYEDLEAALDRLANTTIKVINLSQGRRRQVDSRPLISGYRVVSRTGANRIELVEITIPDWVYLSVVNDVKTVPLLTLHEDYFLISSGLGRFIYRLARKAAGKGEATYSLREVYKRSGSSQDFRKFAYDLRQFVSRTQAFPMPDYNLALQDGKEGPILHMQRRNGDEGTALQIEAELQ
SIO_010081: GFD27_RS22910
subclass of: SO_0000673
so part of: GFD27_RS22910
location: 89581..90807
location: region:89581-90807:1
so has part: feature:89581-90807:1:exon

WP_077548629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89581-90807:1:exon

GFD27_RS22915
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22915
old locus tag: RFYW14_04632
so part of: sequence
location: complement(91354..91695)
location: region:91354-91695:-1
so has part: feature:91354-91695:-1:exon
subclass of: SO_0000010

position:91354:-1
position: 91354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91695:-1
position: 91695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91354-91695:-1:exon

GFD27_RS22915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22915
old locus tag: RFYW14_04632
inference: COORDINATES: protein motif:HMM:NF012514.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX domain-containing protein
translation: MKHTYTPGWHLPGGGVTNGMSVLETLEKELREEGNLRLASPPHLRQIFFNRDASAREHIVLYTVAVTQSGETGPSLEIAEGRFFPLHALPDDTDAATLRRIQEMRVGSFGTVW
SIO_010081: GFD27_RS22915
subclass of: SO_0000673
so part of: GFD27_RS22915
location: complement(91354..91695)
location: region:91354-91695:-1
so has part: feature:91354-91695:-1:exon

WP_235864295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91354-91695:-1:exon

GFD27_RS22920
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22920
old locus tag: RFYW14_04633
so part of: sequence
location: 92050..93246
location: region:92050-93246:1
so has part: feature:92050-93246:1:exon
subclass of: SO_0000010

position:92050:1
position: 92050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93246:1
position: 93246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92050-93246:1:exon

GFD27_RS22920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22920
old locus tag: RFYW14_04633
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558312.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MTDDMMNLRSLVEKSADADLLREMIGFAAEKLMALEVSTKTGAGYGEKNSFRLAQRNGYRDRDWETRAGTVELRIPKLRTGSYFPSFLEPRRMAEKALTAVIQEAYIQGVSTRSVDDLVKAMGMSGISKSQVSRLCEEIDEKVKAFLDRPIEGEWPYLWIDATYLKVRRGGRIVSVAVIIAVGVNTDGRREVLGMEIGTSEAEAIWTEFLRKLTRRGLCGVKLVVSDAHEGIKAAVSKVLSATWQRCRVHFMRNALAHAGKSGRRVVSAFIATAFAQDTSEAASTQWRNVADQIRPKVPKLASLMDSAEQDVLAYMTFPKQHWAKLHSTNPIERLNGEIKRRTEVVGIFPNDDAIVRLVGALLLEQNDEWAVQRSRYMTLETIATMSDDPLISLPAAS
SIO_010081: GFD27_RS22920
subclass of: SO_0000673
so part of: GFD27_RS22920
location: 92050..93246
location: region:92050-93246:1
so has part: feature:92050-93246:1:exon

WP_152338409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92050-93246:1:exon

GFD27_RS22925
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22925
old locus tag: RFYW14_04634
so part of: sequence
location: 93790..94461
location: region:93790-94461:1
so has part: feature:93790-94461:1:exon
subclass of: SO_0000010

position:93790:1
position: 93790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94461:1
position: 94461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93790-94461:1:exon

GFD27_RS22925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22925
old locus tag: RFYW14_04634
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015914926.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPVIAVANPKGGAGKSTTTLVVASTLAANGASVMILDCDPNRPIRDWRRGPSKNPLVVDGDVNESNITTKLDTYRRQHQFVFVDLEGTASRLMSRALARSQLVIIPIQASPTDAEQAAKAIRLIQEEEQSFEKTIPYRILFTRTSPAIPTKLERAILSQLRGGHVPQFGTHLNERSAYKSMFYHQLALEELDPADVNGLPQARDNAAKLAEELIEIVVGKVAA
SIO_010081: GFD27_RS22925
subclass of: SO_0000673
so part of: GFD27_RS22925
location: 93790..94461
location: region:93790-94461:1
so has part: feature:93790-94461:1:exon

WP_077545897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93790-94461:1:exon

GFD27_RS22935
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22935
old locus tag: RFYW14_04636
so part of: sequence
location: complement(94780..96354)
location: region:94780-96354:-1
so has part: feature:94780-96354:-1:exon
subclass of: SO_0000010

position:94780:-1
position: 94780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96354:-1
position: 96354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94780-96354:-1:exon

GFD27_RS22935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22935
old locus tag: RFYW14_04636
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012881262.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MTISRLIGSLVKAPFLGLAGLILGFFASALLLLASFLIHMVGGIEQNGVSRMVYVIANYLPVALGAVGVVSAFLPGVHIPPVFGSARWATKDEMRDFSTTGDSGLLIGRDPSSRKLLRYDGPAHLMTMAPTRTGKGVGTIIPNLLTADRSIICIDPKGENAKVTASVRERFGPVHILDPFGVTDRPSAAFNPLDLMDPDSLDVAEDANALADALVFDDPGLTTEVHWNEEAKALIAGLILKILVAESPGRRHLGTLREYLTLAPERFLGLLSRMQEAEEINGLIARAANRHLGKSDREAAGVLSAAQRHTHFLDSPRMTAVLRRSDFRFADLKRAKMTVFLVLPPDRISTYSRWVRLLVTESLTDMARDAALPSQPVLYLLDEFAALGHLAPVERAMGLMAGYGVQLWPILQDINQLRATYGQRAGTFLANAAVLQIFGVNDIETASLIARMIGKTDARYATKSWSEGKTSTSEHVSARSLINADEIMRLSSDQMILLRQGERPALAQKLRYYADMEFKALIEH
SIO_010081: GFD27_RS22935
subclass of: SO_0000673
so part of: GFD27_RS22935
location: complement(94780..96354)
location: region:94780-96354:-1
so has part: feature:94780-96354:-1:exon

WP_077545899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94780-96354:-1:exon

GFD27_RS22940
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22940
old locus tag: RFYW14_04637
so part of: sequence
location: complement(96351..96650)
location: region:96351-96650:-1
so has part: feature:96351-96650:-1:exon
subclass of: SO_0000010

position:96351:-1
position: 96351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96650:-1
position: 96650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96351-96650:-1:exon

GFD27_RS22940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22940
old locus tag: RFYW14_04637
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012881263.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mobilization protein
translation: MPRKTIEQRIAELEERKKALKARLGKQERAQDTRRKILLGALVLHRLDNSNNSDFADQLRDWIRKELPGFLTRDGDKALFDDILNASSSPEVTTSEQQT
SIO_010081: GFD27_RS22940
subclass of: SO_0000673
so part of: GFD27_RS22940
location: complement(96351..96650)
location: region:96351-96650:-1
so has part: feature:96351-96650:-1:exon

WP_077545900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96351-96650:-1:exon

GFD27_RS22945
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22945
old locus tag: RFYW14_04638
so part of: sequence
location: complement(96661..97449)
location: region:96661-97449:-1
so has part: feature:96661-97449:-1:exon
subclass of: SO_0000010

position:96661:-1
position: 96661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97449:-1
position: 97449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96661-97449:-1:exon

GFD27_RS22945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22945
old locus tag: RFYW14_04638
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012760581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NYN domain-containing protein
translation: MATENGTLAVLIDGDNVSPKIIVGLIAEIANYGVASVRRIYGDWTGPSLKGWKQCLLEHSIQPVQQFAYTAGKNATDGAMIIDAMDLLYTGRFSAFCIVSSDSDFARLAARIREQGLTVYGFGERKTPRPFITACDKFVYFDVLDASAEEPDEVPVAALPGSSRSKPSDAQPASKRRELDKTARDMLTRAILATADEDGRANLAQVGGHLAKQAPDFDARNYGFQKLSSLVKASGMVDVERPSDNPKIITVRLKDASARPVK
SIO_010081: GFD27_RS22945
subclass of: SO_0000673
so part of: GFD27_RS22945
location: complement(96661..97449)
location: region:96661-97449:-1
so has part: feature:96661-97449:-1:exon

WP_077545901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96661-97449:-1:exon

GFD27_RS22950
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
gene: traA
locus tag: GFD27_RS22950
old locus tag: RFYW14_04639
so part of: sequence
location: 97643..100930
location: region:97643-100930:1
so has part: feature:97643-100930:1:exon
subclass of: SO_0000010

position:97643:1
position: 97643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100930:1
position: 100930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97643-100930:1:exon

GFD27_RS22950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
gene: traA
locus tag: GFD27_RS22950
old locus tag: RFYW14_04639
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018068214.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIYHLSMKVISRSGGRSAIAAVAYRTASKLLNKRDGLVHDFTRKQGVEHAEIMLPAGVAADWARDRSALWNQVELIEKRKDARVAREFEVALPHELNASERLTLTREFAQDLANRYGAAVDFAIHQPHGEGDVRNFHAHVLMTTRRINAEGLGEKTLIERENKWLLNHNHPTSHMQLRSMRQAWETHANQHLTLAGLDVRIDHRSHQERGLEIEPTEHLGVYATQMDRRGLTVSRSRIDEKAARRNAELICQKPEQVLSVITGEKSVFDRHDIAKALHRYIEDPQAFQNAFAIAMASSALVELVPEQAGALARYTTREMLEIERDMVVNAERMGRSSGYAVDLRHIERALHRQDAAIQARAAASMPDKRDGHARERDQAERGVENIGLSDEQRIAVNHVTGSGKIAAVIGFAGAGKSTMLAAAREAWESEGYRVFGAALAGKAAEGLEESSGIASRTLASWEYGWQSNKGLLAEGDVLVIDEAGMVGSRQMARFVTEAESRGAKLVLVGDHEQLQAIGAGSPFRAIAECVGAVELTEVRRQSEDWQRQASIAFATHRTGEGLTAYADRGHVRFADDRDEARAALVRDYLVDLEGRPAGTRIGLAHRRIDVRAINADIRASLQERGRLARGGEQGGLGREVVYQTNDGKRSFAPGDRIVLLENNRELAVKNGMLGTVQAVEPDVLQIGLDAGGPTGGRTVSIPVNSYQAFDYGYATTIHKSQGATVDRAFVMASGTMDRHLTYVAMTRHRHEVQLYAGRDELKDLVALSASMSRSGIKETTFDYTREFAKRRGLADELGVRSEISVNVSPVGNEDRSAAHYGAREERVRSPTALHSPAIAGMPMEKVEPLVPALTRYSRSIEEVAVDRARPHLEQAMEAVRSVSRKVYSDPDPVVAKLKEAIVEGGGNGRSLAISVAERPEQFGELLGKTGLLGENKTRQAARQFAKALSNHVGWAGETWNRRLDEERQAEAWYRKERDVVEIPGLTQSSESLLRQLANLPQADKPKFLEALASTPEGKQALEEARTITFALQQRFGSSDPRDLKRGDLRLGPEAAVTLDRIKTVARLTHRARNAELSRQYELKRSLTKGLGLSI
SIO_010081: GFD27_RS22950
subclass of: SO_0000673
so part of: GFD27_RS22950
location: 97643..100930
location: region:97643-100930:1
so has part: feature:97643-100930:1:exon

WP_077545902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97643-100930:1:exon

GFD27_RS22955
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22955
old locus tag: RFYW14_04640
so part of: sequence
location: complement(101080..101262)
location: region:101080-101262:-1
so has part: feature:101080-101262:-1:exon
subclass of: SO_0000010

position:101080:-1
position: 101080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101262:-1
position: 101262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101080-101262:-1:exon

GFD27_RS22955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22955
old locus tag: RFYW14_04640
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: CrpP-related protein
translation: MEIILDWQQRGVTARVLGLKQEDNPLLKHQPERGDTSFEEWKQKVEAWLFGWAIEDAMRQ
SIO_010081: GFD27_RS22955
subclass of: SO_0000673
so part of: GFD27_RS22955
location: complement(101080..101262)
location: region:101080-101262:-1
so has part: feature:101080-101262:-1:exon

WP_077545903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101080-101262:-1:exon

GFD27_RS23325
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS23325
pseudo: true
so part of: sequence
location: complement(<102300..103319)
location: region:102300-103319:-1
so has part: feature:102300-103319:-1:exon
subclass of: SO_0000010

position:102300:-1
position: 102300
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:103319:-1
position: 103319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102300-103319:-1:exon

GFD27_RS23325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS23325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012760350.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: FecR domain-containing protein
SIO_010081: GFD27_RS23325
subclass of: SO_0000673
so part of: GFD27_RS23325
location: complement(<102300..103319)
location: region:102300-103319:-1
so has part: feature:102300-103319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102300-103319:-1:exon

GFD27_RS22965
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22965
old locus tag: RFYW14_04642
so part of: sequence
location: complement(103555..104010)
location: region:103555-104010:-1
so has part: feature:103555-104010:-1:exon
subclass of: SO_0000010

position:103555:-1
position: 103555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104010:-1
position: 104010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103555-104010:-1:exon

GFD27_RS22965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22965
old locus tag: RFYW14_04642
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011439477.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MLDTNIVSLLAPKKDAGLRISSELADWIRKNTDSLFLSAITMAEIRSGISKLRRSGGQTRSDDLELWLGKLVSNYGDRILPVEVHTAIMAGDLADQATAAGRNPGLANIFVAATAQQHHLCLLTANIKHFEHLALSMPVQNPLDHLPSDRH
SIO_010081: GFD27_RS22965
subclass of: SO_0000673
so part of: GFD27_RS22965
location: complement(103555..104010)
location: region:103555-104010:-1
so has part: feature:103555-104010:-1:exon

WP_235864349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103555-104010:-1:exon

GFD27_RS22970
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22970
old locus tag: RFYW14_04643
so part of: sequence
location: complement(104019..104261)
location: region:104019-104261:-1
so has part: feature:104019-104261:-1:exon
subclass of: SO_0000010

position:104019:-1
position: 104019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104261:-1
position: 104261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104019-104261:-1:exon

GFD27_RS22970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22970
old locus tag: RFYW14_04643
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011439476.1
GO component: GO:0110001 - toxin-antitoxin complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: MRTLNLREAKATFSAVVDAAVHGEPTVVTKHGRPAVMIVPIEEGRRIFPHTKPSFADLLLSMPHELEIERDQTPMREVDL
SIO_010081: GFD27_RS22970
subclass of: SO_0000673
so part of: GFD27_RS22970
location: complement(104019..104261)
location: region:104019-104261:-1
so has part: feature:104019-104261:-1:exon

WP_077549250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104019-104261:-1:exon

GFD27_RS22975
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22975
old locus tag: RFYW14_04644
so part of: sequence
location: 104515..105363
location: region:104515-105363:1
so has part: feature:104515-105363:1:exon
subclass of: SO_0000010

position:104515:1
position: 104515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105363:1
position: 105363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104515-105363:1:exon

GFD27_RS22975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22975
old locus tag: RFYW14_04644
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRILFSLPVHERPDIVRNQIDNIKYFCPDALICLHISEGAAEERSEFLRQCDVENVLINPHSYPTQWSAGIMHTHISNFLYVIEANWDFDKIVLISSNELLVKHGLEDYVARFEIGSQMEVYDSSNDWGVFREDFLKSGSMQGYLSALGLPLFFGGQAEGQFASKALFLQIAKAFVANFPMGPIGFPIEEVILPTMAARSGLIGVTVGMPITLCNYCNNLQITPQVVDQVRSARGALFARRVPRALRSPHIGASVLDSVFSVKRVPREDCELRRYIVSLMV
SIO_010081: GFD27_RS22975
subclass of: SO_0000673
so part of: GFD27_RS22975
location: 104515..105363
location: region:104515-105363:1
so has part: feature:104515-105363:1:exon

WP_077549249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104515-105363:1:exon

GFD27_RS22980
type: Gene
subclass of: SO_0000704
RO_0002162: 1335061
locus tag: GFD27_RS22980
so part of: sequence
location: complement(105414..105833)
location: region:105414-105833:-1
so has part: feature:105414-105833:-1:exon
subclass of: SO_0000010

position:105414:-1
position: 105414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105833:-1
position: 105833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105414-105833:-1:exon

GFD27_RS22980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335061
locus tag: GFD27_RS22980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAMVSPDEPIIIDLADILFSEGPQHPRALFESDGYGAIVPSFSSDESCFSYLKITAGLVIEAREKQVISSHASAGVYMFATSGIFLTAAAHSIAHRDSLAVNNNLFICPMINGVIAAGHTVIAPNITDYHPIGKIFHSL
SIO_010081: GFD27_RS22980
subclass of: SO_0000673
so part of: GFD27_RS22980
location: complement(105414..105833)
location: region:105414-105833:-1
so has part: feature:105414-105833:-1:exon

WP_077549248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105414-105833:-1:exon