Frigidibacter mobilis strain cai42 plasmid pcai42B, complete sequence.
type: Entry
definition: Frigidibacter mobilis strain cai42 plasmid pcai42B, complete sequence.
sequence version: NZ_CP012663.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP012663.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN03956960
keyword: RefSeq
source: Frigidibacter mobilis
organism: Frigidibacter mobilis
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Frigidibacter.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP012663.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP de novo in SMRT Analysis v. 2.1\nGenome Coverage :: missing\nSequencing Technology :: Illumina Hiseq 2000; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/05/2023 22:24:24\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,018\nCDSs (total) :: 4,962\nGenes (coding) :: 4,586\nCDSs (with protein) :: 4,586\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 4\nPseudo Genes (total) :: 376\nCDSs (without protein) :: 376\nPseudo Genes (ambiguous residues) :: 0 of 376\nPseudo Genes (frameshifted) :: 280 of 376\nPseudo Genes (incomplete) :: 118 of 376\nPseudo Genes (internal stop) :: 11 of 376\nPseudo Genes (multiple problems) :: 30 of 376\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 19278
topology: circular
so has quality: SO_0000988
location: 1..19278
location: region:1-19278:1
RO_0002162: 1335048

NZ_CP012663
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN03956960
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Defluviimonas alba cai42t isolated from an oilfield in Xinjiang
author: Geng, S.
author: Pan, X.
author: Wu, X.
journal: Unpublished

2
title: Direct Submission
author: Geng, S.
author: Pan, X.
author: Wu, X.
journal: Submitted (10-SEP-2015) Peking University, Beier Street, Zhongguancun, Haidian District, Beijing, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19278:1
position: 19278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19278:1:source
so part of: sequence
organism: Frigidibacter mobilis
mol type: genomic DNA
strain: cai42
culture collection: CGMCC:1.12518
culture collection: LMG:27406
type material: type strain of Frigidibacter mobilis
plasmid: pcai42B

1335048
type: Taxonomy
SIO_000068: taxonomy

AKL17_RS22915
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22915
old locus tag: AKL17_2p0002
so part of: sequence
location: 989..1588
location: region:989-1588:1
so has part: feature:989-1588:1:exon
subclass of: SO_0000010

position:989:1
position: 989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588:1
position: 1588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989-1588:1:exon

AKL17_RS22915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22915
old locus tag: AKL17_2p0002
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MANLSENTKFLSDPQIKAATARSSFDMADLIRKPTSVYLVIPPDRIDTQRTWLRLIVAAVMNTHRYYPLDQRPGHRCMVLMDEFPALGRMPDMPSDIATMAGYGIDFTLIVQGIDQLKDHYGKGAAALLSNCAYKWFCNVQDLESAKYLSETLGKTTVRTLGQSEGENQGPAARQRARQELRGDRPAAAGPRRGADAGP
SIO_010081: AKL17_RS22915
subclass of: SO_0000673
so part of: AKL17_RS22915
location: 989..1588
location: region:989-1588:1
so has part: feature:989-1588:1:exon

WP_250647480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:989-1588:1:exon

AKL17_RS27340
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS27340
so part of: sequence
location: 1470..1808
location: region:1470-1808:1
so has part: feature:1470-1808:1:exon
subclass of: SO_0000010

position:1470:1
position: 1470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1808:1
position: 1808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1470-1808:1:exon

AKL17_RS27340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS27340
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MGSPRARTKARRRVKERGKSYGETGRLLLAPDEVLTLGRDVAIVLNPEGHPLYVHPVDYWQLKDAFRHLAGRTLRFTTLRFDENPYHEAGKKKAGQGASRRSRPRPNPAPAP
SIO_010081: AKL17_RS27340
subclass of: SO_0000673
so part of: AKL17_RS27340
location: 1470..1808
location: region:1470-1808:1
so has part: feature:1470-1808:1:exon

WP_250647481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1470-1808:1:exon

AKL17_RS22920
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22920
so part of: sequence
location: 1714..1983
location: region:1714-1983:1
so has part: feature:1714-1983:1:exon
subclass of: SO_0000010

position:1714:1
position: 1714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983:1
position: 1983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1714-1983:1:exon

AKL17_RS22920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22920
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: J domain-containing protein
translation: MKTPIMRPARRRRGRGRAEEAGPAQIQHRPHEPAAALSILGLAEGATPAQINAAYKRLIKKFHSDAGGTDGLAVLLNEARAVLLGGKAA
SIO_010081: AKL17_RS22920
subclass of: SO_0000673
so part of: AKL17_RS22920
location: 1714..1983
location: region:1714-1983:1
so has part: feature:1714-1983:1:exon

WP_166507309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1714-1983:1:exon

AKL17_RS22925
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22925
old locus tag: AKL17_2p0005
so part of: sequence
location: 2604..2783
location: region:2604-2783:1
so has part: feature:2604-2783:1:exon
subclass of: SO_0000010

position:2604:1
position: 2604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2783:1
position: 2783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2604-2783:1:exon

AKL17_RS22925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22925
old locus tag: AKL17_2p0005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MADDLTMHRRLADLPAPAADNDPLADARLMARAAGFGDRVDLFIIARARGHRIMPEGTA
SIO_010081: AKL17_RS22925
subclass of: SO_0000673
so part of: AKL17_RS22925
location: 2604..2783
location: region:2604-2783:1
so has part: feature:2604-2783:1:exon

WP_066819069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2604-2783:1:exon

AKL17_RS22930
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
gene: mobC
locus tag: AKL17_RS22930
old locus tag: AKL17_2p0006
so part of: sequence
location: 2780..3226
location: region:2780-3226:1
so has part: feature:2780-3226:1:exon
subclass of: SO_0000010

position:2780:1
position: 2780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3226:1
position: 3226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2780-3226:1:exon

AKL17_RS22930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
gene: mobC
locus tag: AKL17_RS22930
old locus tag: AKL17_2p0006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006966993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MTDTPRQPRPKSEARQRTDRLFVRLTPEEKAIFLGRADKAGLTAAAFLRAAALGDAGPRAQKRVPADAQALREVLGHLGKIGGNLNQIARYLHTGGSTEVVLGDIRDVLADHARIRDRLYEALGKVPDHARPSDPTQTPPPKRPPPQR
SIO_010081: AKL17_RS22930
subclass of: SO_0000673
so part of: AKL17_RS22930
location: 2780..3226
location: region:2780-3226:1
so has part: feature:2780-3226:1:exon

WP_066819072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2780-3226:1:exon

AKL17_RS22935
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22935
old locus tag: AKL17_2p0007
so part of: sequence
location: 3236..4780
location: region:3236-4780:1
so has part: feature:3236-4780:1:exon
subclass of: SO_0000010

position:3236:1
position: 3236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4780:1
position: 4780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3236-4780:1:exon

AKL17_RS22935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22935
old locus tag: AKL17_2p0007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006966991.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MIVKGGSRGGPQQLADHLRRTDTNERVEVLELHAGTDDLAATFRDWQVLSEATRGSKGLYHVNIDPDARYVMTPDQWARAVEVLEQELGLTGQPRAVVMHEKKGRQHIHVVWARTDLETMTLRDDGFNYDAHERASLRMEQEFGHEHVPGKHAKRDREKQPDFPRAEITHAEWQQAERAALSIDERKAQITAIKESCDSGPAFRAALDEAGYVLARGDRRGFVLVDAEGEVHVLGRQIGMRAAEVKAFMADVDMDALPSVAEAREHQEARQAAPVPEAISPDPAPPAPEASAPEKPALSAVQMDPPPIEDLAPAPEARKPDLDPAPLDPLVAAALAAREREEADKLAAWHAAETRQLERALLREVQDKLKAQDALDAAERRRFEREMKEKQRGILGYIEALQNRLNPGRGAELRQAREQARQQLHARQEIERRDMQVLWEQTKAQELEALAERHAQQMREQAGRFEEDRKRYAEDTERSRRLLERIEEERRLRERQEQERWGRGDPPGGGGRTK
SIO_010081: AKL17_RS22935
subclass of: SO_0000673
so part of: AKL17_RS22935
location: 3236..4780
location: region:3236-4780:1
so has part: feature:3236-4780:1:exon

WP_066819074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3236-4780:1:exon

AKL17_RS22940
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22940
old locus tag: AKL17_2p0008
so part of: sequence
location: 4795..5142
location: region:4795-5142:1
so has part: feature:4795-5142:1:exon
subclass of: SO_0000010

position:4795:1
position: 4795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5142:1
position: 5142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4795-5142:1:exon

AKL17_RS22940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22940
old locus tag: AKL17_2p0008
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPEPGRSQEQQVATDDPADREDDDEDEEETAHFGVRGLESRFLAPVRRMVSRFWQAPPSAVPRAPAQPRGLRALLTRFLMPSRFRRRPVAPPLPPEQPSRPLKSRFDQSAGPKL
SIO_010081: AKL17_RS22940
subclass of: SO_0000673
so part of: AKL17_RS22940
location: 4795..5142
location: region:4795-5142:1
so has part: feature:4795-5142:1:exon

WP_066819075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4795-5142:1:exon

AKL17_RS22945
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22945
old locus tag: AKL17_2p0009
so part of: sequence
location: complement(5181..5459)
location: region:5181-5459:-1
so has part: feature:5181-5459:-1:exon
subclass of: SO_0000010

position:5181:-1
position: 5181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5459:-1
position: 5459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5181-5459:-1:exon

AKL17_RS22945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22945
old locus tag: AKL17_2p0009
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRWLPGSHEDGTEEWYRHGQRHREDGPALVRPSGEEFWFFEGRLHRDGGPAVKRKDGTEEWYQHGKRHREDGPAVIWPSGLQEWWRDGHRTK
SIO_010081: AKL17_RS22945
subclass of: SO_0000673
so part of: AKL17_RS22945
location: complement(5181..5459)
location: region:5181-5459:-1
so has part: feature:5181-5459:-1:exon

WP_066819077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5181-5459:-1:exon

AKL17_RS22950
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22950
old locus tag: AKL17_2p0010
so part of: sequence
location: 5891..6643
location: region:5891-6643:1
so has part: feature:5891-6643:1:exon
subclass of: SO_0000010

position:5891:1
position: 5891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6643:1
position: 6643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5891-6643:1:exon

AKL17_RS22950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22950
old locus tag: AKL17_2p0010
inference: COORDINATES: protein motif:HMM:NF019575.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MRGMYQEDLSTRNQGFTLVELAIVITIIGLLIGGVLKGQELINNARVTATIAQIKAYQAAMLSFQDRYDQFPGDFSVALTRVPGCTTDNYCSNGDGNSRVGNYYTGAAIGTIQTGTAVPAVETSNYWKHLAMADLISGVNPSANPASPVFGKTHPSSPFGGGFMTVFGMHVTGSKAGLWLVLSNTLTGTTAYLPSAQNVLTPARAAQIDRKMDDGRPDAGYVQSPDNGTCDSGSPGFIGKVMNMRTKRPA
SIO_010081: AKL17_RS22950
subclass of: SO_0000673
so part of: AKL17_RS22950
location: 5891..6643
location: region:5891-6643:1
so has part: feature:5891-6643:1:exon

WP_066819079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5891-6643:1:exon

AKL17_RS22955
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22955
so part of: sequence
location: 6663..7151
location: region:6663-7151:1
so has part: feature:6663-7151:1:exon
subclass of: SO_0000010

position:6663:1
position: 6663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7151:1
position: 7151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6663-7151:1:exon

AKL17_RS22955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22955
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMKIAWVTLFSVITVATVAYVWPQEPAFVVASDGTKFWLDEGLPHRDGAPAIIAANGAQFWLQHGIVHRDDGPAITWPSGAEIWCRHGLLHRDGGPAVTSAAGRRGWWIEGKPYRLDVPVVDRRSGVEQWGCNGQPWQGEEAAVWRTVSGVSANAAPSHIP
SIO_010081: AKL17_RS22955
subclass of: SO_0000673
so part of: AKL17_RS22955
location: 6663..7151
location: region:6663-7151:1
so has part: feature:6663-7151:1:exon

WP_066819082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6663-7151:1:exon

AKL17_RS22960
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22960
old locus tag: AKL17_2p0012
so part of: sequence
location: complement(7214..7441)
location: region:7214-7441:-1
so has part: feature:7214-7441:-1:exon
subclass of: SO_0000010

position:7214:-1
position: 7214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7441:-1
position: 7441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7214-7441:-1:exon

AKL17_RS22960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22960
old locus tag: AKL17_2p0012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018240730.1
GO process: GO:0051983 - regulation of chromosome segregation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system ParD family antitoxin
translation: MSGGTLLRGRSKSGRYSSASEVMREGLRLVEEREARLTALHQTLDAAIAEGGKQSAADAKAVVDAKLADLKKAGL
SIO_010081: AKL17_RS22960
subclass of: SO_0000673
so part of: AKL17_RS22960
location: complement(7214..7441)
location: region:7214-7441:-1
so has part: feature:7214-7441:-1:exon

WP_066819085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7214-7441:-1:exon

AKL17_RS22970
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22970
pseudo: true
so part of: sequence
location: 7478..8648
location: region:7478-8648:1
so has part: feature:7478-8648:1:exon
subclass of: SO_0000010

position:7478:1
position: 7478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8648:1
position: 8648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7478-8648:1:exon

AKL17_RS22970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22970
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611339.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AKL17_RS22970
subclass of: SO_0000673
so part of: AKL17_RS22970
location: 7478..8648
location: region:7478-8648:1
so has part: feature:7478-8648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7478-8648:1:exon

AKL17_RS22975
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22975
pseudo: true
so part of: sequence
location: 8972..10326
location: region:8972-10326:1
so has part: feature:8972-10326:1:exon
subclass of: SO_0000010

position:8972:1
position: 8972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10326:1
position: 10326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8972-10326:1:exon

AKL17_RS22975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011997539.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1380-like element ISPme1 family transposase
SIO_010081: AKL17_RS22975
subclass of: SO_0000673
so part of: AKL17_RS22975
location: 8972..10326
location: region:8972-10326:1
so has part: feature:8972-10326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8972-10326:1:exon

AKL17_RS22980
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22980
old locus tag: AKL17_2p0020
so part of: sequence
location: 10448..11029
location: region:10448-11029:1
so has part: feature:10448-11029:1:exon
subclass of: SO_0000010

position:10448:1
position: 10448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11029:1
position: 11029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10448-11029:1:exon

AKL17_RS22980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22980
old locus tag: AKL17_2p0020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDDRHRSGRKTLAQRAKSGDLEVKRQATWGMSGHRGFMRKLTFRNVMVAGAAMLLAGPLTGYGQNSASADTTVEALPLKRGYYVRSGTPCNRASRADVFSLVTRKGMNLNCTFKKIEKTGATTYRVTQECSSSGAAWGRPDEIETSTDTYEIPNETSYNVTYDGGYQASARYCAQSSMSPEYRSNDISDLIK
SIO_010081: AKL17_RS22980
subclass of: SO_0000673
so part of: AKL17_RS22980
location: 10448..11029
location: region:10448-11029:1
so has part: feature:10448-11029:1:exon

WP_166507041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10448-11029:1:exon

AKL17_RS25610
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS25610
so part of: sequence
location: 11042..11419
location: region:11042-11419:1
so has part: feature:11042-11419:1:exon
subclass of: SO_0000010

position:11042:1
position: 11042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11419:1
position: 11419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11042-11419:1:exon

AKL17_RS25610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS25610
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLKTYNEHATFGPSAGRPQRRRRRPAGRLCGAEFWPSRRSVQLDIEQLAGRAPHWMRRHPFKRGLALLIFAQILFVVIGTVVKPGSVVADLLSFSLLVAMVIGLAGVVVGIRDALKRRRAKAAS
SIO_010081: AKL17_RS25610
subclass of: SO_0000673
so part of: AKL17_RS25610
location: 11042..11419
location: region:11042-11419:1
so has part: feature:11042-11419:1:exon

WP_166507310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11042-11419:1:exon

AKL17_RS27090
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS27090
old locus tag: AKL17_2p0023
so part of: sequence
location: complement(11827..12372)
location: region:11827-12372:-1
so has part: feature:11827-12372:-1:exon
subclass of: SO_0000010

position:11827:-1
position: 11827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12372:-1
position: 12372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11827-12372:-1:exon

AKL17_RS27090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS27090
old locus tag: AKL17_2p0023
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRLITAAELDHQPEAVLHSKFMCVSRFLHRTDATTTARRNALASLENINRAIIKRRLKGPGCNPALRALGRAHHASRLRECRQVGRLQRLFHLRHRSPFLNAAIRALAYRGVTMLVRIPRPASRPARKGTDPTNPLRHEASGRTSSRSGLRAKSPRPDRVIDAPTPKDVPEGTIRIGQPPG
SIO_010081: AKL17_RS27090
subclass of: SO_0000673
so part of: AKL17_RS27090
location: complement(11827..12372)
location: region:11827-12372:-1
so has part: feature:11827-12372:-1:exon

WP_236938202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11827-12372:-1:exon

AKL17_RS22990
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22990
so part of: sequence
location: complement(12619..12831)
location: region:12619-12831:-1
so has part: feature:12619-12831:-1:exon
subclass of: SO_0000010

position:12619:-1
position: 12619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12831:-1
position: 12831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12619-12831:-1:exon

AKL17_RS22990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019751310.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAIATEDDGFTIIELLDGWELEAGDVLTWRNGYGLGSETYVNVSRGTRAEVYVQNHSVSRASLRQQLLL
SIO_010081: AKL17_RS22990
subclass of: SO_0000673
so part of: AKL17_RS22990
location: complement(12619..12831)
location: region:12619-12831:-1
so has part: feature:12619-12831:-1:exon

WP_066819089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12619-12831:-1:exon

AKL17_RS22995
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS22995
old locus tag: AKL17_2p0026
pseudo: true
so part of: sequence
location: complement(<12992..13494)
location: region:12992-13494:-1
so has part: feature:12992-13494:-1:exon
subclass of: SO_0000010

position:12992:-1
position: 12992
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:13494:-1
position: 13494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12992-13494:-1:exon

AKL17_RS22995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS22995
old locus tag: AKL17_2p0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011996094.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AKL17_RS22995
subclass of: SO_0000673
so part of: AKL17_RS22995
location: complement(<12992..13494)
location: region:12992-13494:-1
so has part: feature:12992-13494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12992-13494:-1:exon

AKL17_RS23000
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS23000
old locus tag: AKL17_2p0027
pseudo: true
so part of: sequence
location: complement(13589..14073)
location: region:13589-14073:-1
so has part: feature:13589-14073:-1:exon
subclass of: SO_0000010

position:13589:-1
position: 13589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14073:-1
position: 14073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13589-14073:-1:exon

AKL17_RS23000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS23000
old locus tag: AKL17_2p0027
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015282242.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
SIO_010081: AKL17_RS23000
subclass of: SO_0000673
so part of: AKL17_RS23000
location: complement(13589..14073)
location: region:13589-14073:-1
so has part: feature:13589-14073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13589-14073:-1:exon

AKL17_RS23005
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS23005
old locus tag: AKL17_2p0028
so part of: sequence
location: complement(14082..14366)
location: region:14082-14366:-1
so has part: feature:14082-14366:-1:exon
subclass of: SO_0000010

position:14082:-1
position: 14082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14366:-1
position: 14366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14082-14366:-1:exon

AKL17_RS23005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS23005
old locus tag: AKL17_2p0028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020561573.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MTSKETVSPVTRPVNLRVREDVRDLIDQAARVNGKTRSDFMIEASRQAAENALLDQTFVRVDADTYAQYLAVLDRPPSGEGYERLMRAPKPWKG
SIO_010081: AKL17_RS23005
subclass of: SO_0000673
so part of: AKL17_RS23005
location: complement(14082..14366)
location: region:14082-14366:-1
so has part: feature:14082-14366:-1:exon

WP_066819100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14082-14366:-1:exon

AKL17_RS23010
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS23010
old locus tag: AKL17_2p0029
pseudo: true
so part of: sequence
location: 14592..15160
location: region:14592-15160:1
so has part: feature:14592-15160:1:exon
subclass of: SO_0000010

position:14592:1
position: 14592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15160:1
position: 15160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14592-15160:1:exon

AKL17_RS23010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS23010
old locus tag: AKL17_2p0029
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015472921.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: AKL17_RS23010
subclass of: SO_0000673
so part of: AKL17_RS23010
location: 14592..15160
location: region:14592-15160:1
so has part: feature:14592-15160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14592-15160:1:exon

AKL17_RS27095
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS27095
so part of: sequence
location: complement(15413..15550)
location: region:15413-15550:-1
so has part: feature:15413-15550:-1:exon
subclass of: SO_0000010

position:15413:-1
position: 15413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15550:-1
position: 15550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15413-15550:-1:exon

AKL17_RS27095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS27095
inference: COORDINATES: protein motif:HMM:NF021637.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MSLDILLKKSGSKSSEKEFRRSLRELAAGNHLPTIWCLSTARKTW
SIO_010081: AKL17_RS27095
subclass of: SO_0000673
so part of: AKL17_RS27095
location: complement(15413..15550)
location: region:15413-15550:-1
so has part: feature:15413-15550:-1:exon

WP_236938203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15413-15550:-1:exon

AKL17_RS27100
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS27100
pseudo: true
so part of: sequence
location: complement(<15643..16107)
location: region:15643-16107:-1
so has part: feature:15643-16107:-1:exon
subclass of: SO_0000010

position:15643:-1
position: 15643
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:16107:-1
position: 16107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15643-16107:-1:exon

AKL17_RS27100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS27100
inference: COORDINATES: protein motif:HMM:NF021637.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: replication initiator protein A
SIO_010081: AKL17_RS27100
subclass of: SO_0000673
so part of: AKL17_RS27100
location: complement(<15643..16107)
location: region:15643-16107:-1
so has part: feature:15643-16107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15643-16107:-1:exon

AKL17_RS23020
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS23020
old locus tag: AKL17_2p0032
pseudo: true
so part of: sequence
location: 17225..17913
location: region:17225-17913:1
so has part: feature:17225-17913:1:exon
subclass of: SO_0000010

position:17225:1
position: 17225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17913:1
position: 17913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17225-17913:1:exon

AKL17_RS23020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS23020
old locus tag: AKL17_2p0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018082385.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ParA family protein
SIO_010081: AKL17_RS23020
subclass of: SO_0000673
so part of: AKL17_RS23020
location: 17225..17913
location: region:17225-17913:1
so has part: feature:17225-17913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17225-17913:1:exon

AKL17_RS23025
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS23025
old locus tag: AKL17_2p0033
so part of: sequence
location: 17913..18194
location: region:17913-18194:1
so has part: feature:17913-18194:1:exon
subclass of: SO_0000010

position:18194:1
position: 18194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17913-18194:1:exon

AKL17_RS23025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS23025
old locus tag: AKL17_2p0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005766168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTSSRKPLDFGSLDDFDTPKSGGIEKEVFAPIAEKKAVDRVSAFPSRERLDDSQLNIKAPEEVARRFRAMAKAERYTHGAFLEILMDAYDGKK
SIO_010081: AKL17_RS23025
subclass of: SO_0000673
so part of: AKL17_RS23025
location: 17913..18194
location: region:17913-18194:1
so has part: feature:17913-18194:1:exon

WP_066819095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17913-18194:1:exon

AKL17_RS23030
type: Gene
subclass of: SO_0000704
RO_0002162: 1335048
locus tag: AKL17_RS23030
old locus tag: AKL17_2p0034
so part of: sequence
location: 18238..18705
location: region:18238-18705:1
so has part: feature:18238-18705:1:exon
subclass of: SO_0000010

position:18238:1
position: 18238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18705:1
position: 18705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18238-18705:1:exon

AKL17_RS23030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1335048
locus tag: AKL17_RS23030
old locus tag: AKL17_2p0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006958303.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPEERAALDAYEKGQGDTPNPATHPKLAELRAALDALPDVRRLNGLLDAAMNDASDPVPVTIAVQPGLLRLLAHIAGLDATAAGRAPDPVSASLAQRVHNDLENLLHQLATDPTNHPHYAKAWNALCAAEGAPELAVPDGTPQSGPQAGERGVF
SIO_010081: AKL17_RS23030
subclass of: SO_0000673
so part of: AKL17_RS23030
location: 18238..18705
location: region:18238-18705:1
so has part: feature:18238-18705:1:exon

WP_066819097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18238-18705:1:exon