Streptomonospora nanhaiensis strain 12A09 plasmid p12A09, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Streptosporangiales; Nocardiopsaceae; Streptomonospora.
Description of Streptomonospora sediminis sp. nov. and Streptomonospora nanhaiensis sp. nov., and reclassification of Nocardiopsis arabia Hozzein & Goodfellow 2008 as Streptomonospora arabica comb. nov. and emended description of the genus Streptomonospora
Int J Syst Evol Microbiol 63 (Pt 12), 4447-4455 (2013)
Submitted (25-NOV-2022) the Group of Microbial Biotechnology, Institute of Applied Ecology, Chinese Academy of Sciences, 72 Wenhua Road, Shenhe District, Shenyang, Liaoning 110016, China
REFSEQ INFORMATION: The reference sequence is identical to\nCP113265.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: MAR-2019\nAssembly Method :: HGAP v. 2016; Pilon v. V1.22; CANU v.\n V1.6\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 255.0x\nSequencing Technology :: Illumina MiSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/26/2023 17:11:26\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,306\nCDSs (total) :: 6,229\nGenes (coding) :: 6,177\nCDSs (with protein) :: 6,177\nGenes (RNA) :: 77\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 59\nncRNAs :: 3\nPseudo Genes (total) :: 52\nCDSs (without protein) :: 52\nPseudo Genes (ambiguous residues) :: 0 of 52\nPseudo Genes (frameshifted) :: 12 of 52\nPseudo Genes (incomplete) :: 43 of 52\nPseudo Genes (internal stop) :: 1 of 52\nPseudo Genes (multiple problems) :: 4 of 52\nCRISPR Arrays :: 11\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Streptomonospora nanhaiensis
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_018106296.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF022388.2
COORDINATES: protein motif:HMM:NF041492.1
COORDINATES: similar to AA sequence:RefSeq:WP_017606823.1
COORDINATES: protein motif:HMM:NF015736.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017544635.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017615774.1
COORDINATES: similar to AA sequence:RefSeq:WP_018163626.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013153786.1
COORDINATES: similar to AA sequence:RefSeq:WP_016642463.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017594174.1
COORDINATES: similar to AA sequence:RefSeq:WP_018845093.1