Melopsittacus undulatus isolate bMelUnd1 chromosome 30, bMelUnd1.mat.Z, whole genome shotgun sequence.
type: Entry
definition: Melopsittacus undulatus isolate bMelUnd1 chromosome 30, bMelUnd1.mat.Z, whole genome shotgun sequence.
sequence version: NC_047556.1
sequence date: 2020-05-06
sequence: sequence
division: CON
label: NC_047556.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA629576
dblink: SAMN12623090
keyword: WGS
keyword: RefSeq
source: Melopsittacus undulatus (budgerigar)
organism: Melopsittacus undulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittaculidae; Melopsittacus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022661.1.\nAssembly name: bMelUnd1.mat.Z\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the G10K on 2020/04/13. The\noriginal whole-genome shotgun project has the accession\nJAAVWG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: G10K\nAssembly Date :: 24-FEB-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; Freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-02-24; VGP assembly\n pipeline v. 1.6\nAssembly Name :: bMelUnd1.mat.Z\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 61.11x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Melopsittacus undulatus Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 613772
topology: linear
so has quality: SO_0000987
location: 1..613772
location: region:1-613772:1
RO_0002162: 13146

NC_047556
type: RefSeq
SIO_000068: refseq

PRJNA629576
type: BioProject
SIO_000068: bioproject

SAMN12623090
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613772:1
position: 613772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-613772:1:source
so part of: sequence
organism: Melopsittacus undulatus
mol type: genomic DNA
isolate: bMelUnd1
chromosome: 30
sex: female
tissue type: blood
dev stage: juvenile
country: USA: New Mexico State University
lat lon: 32.278282 N 106.74994 W
collection date: 02-Nov-2018
collected by: Timothy Wright, Justin Apodaca

13146
type: Taxonomy
SIO_000068: taxonomy

LOC117437874
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<577..7811)
location: region:577-7811:-1
so has part: feature:577-7811:-1:exon
subclass of: SO_0000010

117437874
type: Gene
SIO_000068: ncbigene

position:577:-1
position: 577
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:7811:-1
position: 7811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577-7811:-1:exon

LOC117437874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437874
product: neuroguidin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072519.1
SIO_010081: LOC117437874
subclass of: SO_0000673
so part of: LOC117437874
location: complement(join(<577..752,1257..1341,1528..1577,1661..1745,3234..3371,5745..5816,7431..7811))
location: region:577-7811:-1
so has part: feature:7431-7811:-1:exon
so has part: feature:5745-5816:-1:exon
so has part: feature:3234-3371:-1:exon
so has part: feature:1661-1745:-1:exon
so has part: feature:1528-1577:-1:exon
so has part: feature:1257-1341:-1:exon
so has part: feature:577-752:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7431-7811:-1:exon

position:7431:-1
position: 7431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5745-5816:-1:exon

position:5745:-1
position: 5745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5816:-1
position: 5816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3234-3371:-1:exon

position:3234:-1
position: 3234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371:-1
position: 3371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1661-1745:-1:exon

position:1661:-1
position: 1661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745:-1
position: 1745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1528-1577:-1:exon

position:1528:-1
position: 1528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577:-1
position: 1577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1257-1341:-1:exon

position:1257:-1
position: 1257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341:-1
position: 1341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:577-752:-1:exon

position:752:-1
position: 752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroguidin-like
translation: MAATEAVPLLEALQGQVAAVTDHIRLLLLRVRGGGLRTEKGLSLPQLGALQLLLYLQDLGLLLGVKVHGGALGGAPALPRLLETRVVLEKMRPIEHRIKYQVEKLLRAAMTGAPGAEHPLAFHPEPSNMAQEPDPAPLKPPGLGGGRRYVPPHIIPVQYDSMGREQRAQEAARRRALSSSVLRELRDELSDAPQELWGSRGAGGERPSKGEVERWVWG
SIO_010081: LOC117437874
subclass of: SO_0000673
so part of: LOC117437874
location: complement(join(<577..752,1257..1341,1528..1577,1661..1745,3234..3371,5745..5816,7431..7478))
location: region:577-7478:-1
so has part: feature:7431-7478:-1:exon
so has part: feature:5745-5816:-1:exon
so has part: feature:3234-3371:-1:exon
so has part: feature:1661-1745:-1:exon
so has part: feature:1528-1577:-1:exon
so has part: feature:1257-1341:-1:exon
so has part: feature:577-752:-1:exon

XP_033928410.1
type: Protein
SIO_000068: ncbiprotein

position:7478:-1
position: 7478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7431-7478:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5745-5816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3234-3371:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1661-1745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1528-1577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1257-1341:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577-752:-1:exon

LOC117437851
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8492..22800)
location: region:8492-22800:-1
so has part: feature:8492-22800:-1:exon
subclass of: SO_0000010

117437851
type: Gene
SIO_000068: ncbigene

position:8492:-1
position: 8492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22800:-1
position: 22800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8492-22800:-1:exon

LOC117437851
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437851
product: apoptotic chromatin condensation inducer in the nucleus-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072501.1
SIO_010081: LOC117437851
subclass of: SO_0000673
so part of: LOC117437851
location: complement(join(8492..8499,9273..9429,10649..10749,11467..11875,12488..12595,13294..13401,15457..15581,17106..17292,18070..18339,19659..19792,20449..20494,20644..22800))
location: region:8492-22800:-1
so has part: feature:20644-22800:-1:exon
so has part: feature:20449-20494:-1:exon
so has part: feature:19659-19792:-1:exon
so has part: feature:18070-18339:-1:exon
so has part: feature:17106-17292:-1:exon
so has part: feature:15457-15581:-1:exon
so has part: feature:13294-13401:-1:exon
so has part: feature:12488-12595:-1:exon
so has part: feature:11467-11875:-1:exon
so has part: feature:10649-10749:-1:exon
so has part: feature:9273-9429:-1:exon
so has part: feature:8492-8499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20644-22800:-1:exon

position:20644:-1
position: 20644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20449-20494:-1:exon

position:20449:-1
position: 20449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20494:-1
position: 20494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19659-19792:-1:exon

position:19659:-1
position: 19659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19792:-1
position: 19792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18070-18339:-1:exon

position:18070:-1
position: 18070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18339:-1
position: 18339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17106-17292:-1:exon

position:17106:-1
position: 17106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17292:-1
position: 17292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15457-15581:-1:exon

position:15457:-1
position: 15457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15581:-1
position: 15581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13294-13401:-1:exon

position:13294:-1
position: 13294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13401:-1
position: 13401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12488-12595:-1:exon

position:12488:-1
position: 12488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12595:-1
position: 12595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11467-11875:-1:exon

position:11467:-1
position: 11467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11875:-1
position: 11875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10649-10749:-1:exon

position:10649:-1
position: 10649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10749:-1
position: 10749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9273-9429:-1:exon

position:9273:-1
position: 9273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9429:-1
position: 9429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8492-8499:-1:exon

position:8499:-1
position: 8499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437851
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptotic chromatin condensation inducer in the nucleus-like
translation: MGQPTDAPDAPPTPESPARPKAFKRKISVVSAARGSSDAEGGAGPVPGGTRKRRWGSSTGAPKRPSISITTESLKSLIPEMKAEAVVELHPEEEEEEEEEDEDRPMGMEEEAGGGVAGGGGGVASMPLPPPPPPPLLGLPHHLHHHLHHHHGNNPPLKICRTVTQDVPPENGRRHDNEAEGEEGEEEGRGRAEPPPPAGSGPAPSAQATPPAEGAPPPAGAEGDVKRGDPPRRPRPGLVLPVDDPVRAGPNRPSPPRARPSPIVHLCNLVRPFTLGQLKELLGRTGRLREDGFWIDRIKSHCYVTYCSVEEAVATRNALHGVKWPQSNPKVLAADFAEQEELDFHRGLLPERPDTGEEPPGSCPQARGACPGGVASAGRSQSQWAEREREMERRERARGEREWDRDKGAGPGALAPPPASGHAPNASPGHAPSAAGTRPPGAGHAPSGREPRPRHRQPMGDKERAGRGSREGRGEKKEKPPEEPPAKLLDDLFRKTKAAPCIYWLPLTDTQFIQKQAERMARARERERRRKEQEEEELRQQRGAPPPSRDKRAPPTGPAPSGGGL
SIO_010081: LOC117437851
subclass of: SO_0000673
so part of: LOC117437851
location: complement(join(8492..8499,9273..9429,10649..10749,11467..11875,12488..12595,13294..13401,15457..15581,17106..17292,18070..18339,19659..19792,20449..20494,20644..20688))
location: region:8492-20688:-1
so has part: feature:20644-20688:-1:exon
so has part: feature:20449-20494:-1:exon
so has part: feature:19659-19792:-1:exon
so has part: feature:18070-18339:-1:exon
so has part: feature:17106-17292:-1:exon
so has part: feature:15457-15581:-1:exon
so has part: feature:13294-13401:-1:exon
so has part: feature:12488-12595:-1:exon
so has part: feature:11467-11875:-1:exon
so has part: feature:10649-10749:-1:exon
so has part: feature:9273-9429:-1:exon
so has part: feature:8492-8499:-1:exon

XP_033928392.1
type: Protein
SIO_000068: ncbiprotein

position:20688:-1
position: 20688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20644-20688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20449-20494:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19659-19792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18070-18339:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17106-17292:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15457-15581:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13294-13401:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12488-12595:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11467-11875:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10649-10749:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9273-9429:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8492-8499:-1:exon

LOC117437886
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22908..28037)
location: region:22908-28037:-1
so has part: feature:22908-28037:-1:exon
subclass of: SO_0000011

117437886
type: Gene
SIO_000068: ncbigene

position:22908:-1
position: 22908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28037:-1
position: 28037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22908-28037:-1:exon

LOC117437886
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437886
product: uncharacterized LOC117437886
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004550521.1
SIO_010081: LOC117437886
subclass of: SO_0000673
so part of: LOC117437886
location: complement(join(22908..22945,27841..27899,27986..28037))
location: region:22908-28037:-1
so has part: feature:27986-28037:-1:exon
so has part: feature:27841-27899:-1:exon
so has part: feature:22908-22945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27986-28037:-1:exon

position:27986:-1
position: 27986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27841-27899:-1:exon

position:27841:-1
position: 27841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27899:-1
position: 27899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22908-22945:-1:exon

position:22945:-1
position: 22945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437888
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 45324..55830
location: region:45324-55830:1
so has part: feature:45324-55830:1:exon
subclass of: SO_0000010

117437888
type: Gene
SIO_000068: ncbigene

position:45324:1
position: 45324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55830:1
position: 55830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45324-55830:1:exon

LOC117437888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437888
product: poly(A) binding protein nuclear 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072538.1
SIO_010081: LOC117437888
subclass of: SO_0000673
so part of: LOC117437888
location: join(45324..45431,48096..48210,49633..49700,50410..50516,51752..51839,52741..52886,54705..55830)
location: region:45324-55830:1
so has part: feature:45324-45431:1:exon
so has part: feature:48096-48210:1:exon
so has part: feature:49633-49700:1:exon
so has part: feature:50410-50516:1:exon
so has part: feature:51752-51839:1:exon
so has part: feature:52741-52886:1:exon
so has part: feature:54705-55830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45324-45431:1:exon

position:45431:1
position: 45431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48096-48210:1:exon

position:48096:1
position: 48096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48210:1
position: 48210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49633-49700:1:exon

position:49633:1
position: 49633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49700:1
position: 49700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:50410-50516:1:exon

position:50410:1
position: 50410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50516:1
position: 50516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51752-51839:1:exon

position:51752:1
position: 51752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51839:1
position: 51839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:52741-52886:1:exon

position:52741:1
position: 52741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52886:1
position: 52886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:54705-55830:1:exon

position:54705:1
position: 54705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437888
product: poly(A) binding protein nuclear 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072537.1
SIO_010081: LOC117437888
subclass of: SO_0000673
so part of: LOC117437888
location: join(45521..45533,48096..48210,49633..49700,50410..50516,51752..51839,52741..52886,54705..55830)
location: region:45521-55830:1
so has part: feature:45521-45533:1:exon
so has part: feature:48096-48210:1:exon
so has part: feature:49633-49700:1:exon
so has part: feature:50410-50516:1:exon
so has part: feature:51752-51839:1:exon
so has part: feature:52741-52886:1:exon
so has part: feature:54705-55830:1:exon

position:45521:1
position: 45521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45521-45533:1:exon

position:45533:1
position: 45533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48096-48210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49633-49700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50410-50516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51752-51839:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52741-52886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:54705-55830:1:exon

LOC117437888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 2
translation: MEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYSGHPKGFAYIEFSDKESVRTSMALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRFRGRGGFSSSRARFYSGYSRARARAYRGRARATSWYSPY
SIO_010081: LOC117437888
subclass of: SO_0000673
so part of: LOC117437888
location: join(48129..48210,49633..49700,50410..50516,51752..51839,52741..52886,54705..54744)
location: region:48129-54744:1
so has part: feature:48129-48210:1:exon
so has part: feature:49633-49700:1:exon
so has part: feature:50410-50516:1:exon
so has part: feature:51752-51839:1:exon
so has part: feature:52741-52886:1:exon
so has part: feature:54705-54744:1:exon

XP_033928428.1
type: Protein
SIO_000068: ncbiprotein

position:48129:1
position: 48129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54744:1
position: 54744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48129-48210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49633-49700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50410-50516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51752-51839:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52741-52886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:54705-54744:1:exon

LOC117437888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 2
translation: MEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYSGHPKGFAYIEFSDKESVRTSMALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRFRGRGGFSSSRARFYSGYSRARARAYRGRARATSWYSPY
SIO_010081: LOC117437888
subclass of: SO_0000673
so part of: LOC117437888
location: join(48129..48210,49633..49700,50410..50516,51752..51839,52741..52886,54705..54744)
location: region:48129-54744:1
so has part: feature:48129-48210:1:exon
so has part: feature:49633-49700:1:exon
so has part: feature:50410-50516:1:exon
so has part: feature:51752-51839:1:exon
so has part: feature:52741-52886:1:exon
so has part: feature:54705-54744:1:exon

XP_033928429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48129-48210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49633-49700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50410-50516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51752-51839:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52741-52886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:54705-54744:1:exon

LOC117437882
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 57876..99093
location: region:57876-99093:1
so has part: feature:57876-99093:1:exon
subclass of: SO_0000010

117437882
type: Gene
SIO_000068: ncbigene

position:57876:1
position: 57876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99093:1
position: 99093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57876-99093:1:exon

LOC117437882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437882
product: DDB1- and CUL4-associated factor 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072532.1
SIO_010081: LOC117437882
subclass of: SO_0000673
so part of: LOC117437882
location: join(57876..57931,58177..58293,59746..59831,60621..60739,62648..62712,62875..62975,64487..64636,91715..91769,92674..92800,93853..94038,94684..94756,94976..95056,95920..96075,97536..97642,98960..99093)
location: region:57876-99093:1
so has part: feature:57876-57931:1:exon
so has part: feature:58177-58293:1:exon
so has part: feature:59746-59831:1:exon
so has part: feature:60621-60739:1:exon
so has part: feature:62648-62712:1:exon
so has part: feature:62875-62975:1:exon
so has part: feature:64487-64636:1:exon
so has part: feature:91715-91769:1:exon
so has part: feature:92674-92800:1:exon
so has part: feature:93853-94038:1:exon
so has part: feature:94684-94756:1:exon
so has part: feature:94976-95056:1:exon
so has part: feature:95920-96075:1:exon
so has part: feature:97536-97642:1:exon
so has part: feature:98960-99093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57876-57931:1:exon

position:57931:1
position: 57931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58177-58293:1:exon

position:58177:1
position: 58177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58293:1
position: 58293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59746-59831:1:exon

position:59746:1
position: 59746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59831:1
position: 59831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60621-60739:1:exon

position:60621:1
position: 60621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60739:1
position: 60739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62648-62712:1:exon

position:62648:1
position: 62648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62712:1
position: 62712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:62875-62975:1:exon

position:62875:1
position: 62875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62975:1
position: 62975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:64487-64636:1:exon

position:64487:1
position: 64487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64636:1
position: 64636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:91715-91769:1:exon

position:91715:1
position: 91715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91769:1
position: 91769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:92674-92800:1:exon

position:92674:1
position: 92674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92800:1
position: 92800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:93853-94038:1:exon

position:93853:1
position: 93853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94038:1
position: 94038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:94684-94756:1:exon

position:94684:1
position: 94684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94756:1
position: 94756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:94976-95056:1:exon

position:94976:1
position: 94976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95056:1
position: 95056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:95920-96075:1:exon

position:95920:1
position: 95920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96075:1
position: 96075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:97536-97642:1:exon

position:97536:1
position: 97536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97642:1
position: 97642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:98960-99093:1:exon

position:98960:1
position: 98960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437882
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 11-like
translation: MGSQSSSRGAGPEEEGRGEGQEEDDVDLRRVLSLLLRGRSVQDPSDEEEEEEEQWGWGNDDVTAPAPPPPDTRVLDGHELKAELLLARGKGAGPKEENLPRLLRMRQWGRCRNSSFSYGERSMLSSHFLPNHEAFKDQYPQKAFCGIYSPDGSLFVSASQDHLLRFYWSRDPLRLRPFRSAPARDVGWSLLDVTFTPDGTQCVYCSWSNYVHVYDIYGEGDNHTALDMRPDNSRFSIFSLAVGPDGREILGGGSDGCVYVYDRGVQRRTLRVEAHEDDVNAVALLDPGGQLLLSGGDDGVTRVWDRRSMGQEGARPVGLLAGHRDGVTFLHPRGDSRYVLSNSKDQSCKLWDLRCPTGPNGLEATRRAVAKQGWDYRWQRVPHRALTSPPLPGDTSLMTYRGHVVLNTLLRCRLAPPPGPGAGQYLSAACATGAVIVYDVLTGRPVRRLTNHSGCVRDVSWHPEGGALASASWDGSIRLWTYQEPDQEPMGEQRGRDPP
SIO_010081: LOC117437882
subclass of: SO_0000673
so part of: LOC117437882
location: join(58184..58293,59746..59831,60621..60739,62648..62712,62875..62975,64487..64636,91715..91769,92674..92800,93853..94038,94684..94756,94976..95056,95920..96075,97536..97642,98960..99043)
location: region:58184-99043:1
so has part: feature:58184-58293:1:exon
so has part: feature:59746-59831:1:exon
so has part: feature:60621-60739:1:exon
so has part: feature:62648-62712:1:exon
so has part: feature:62875-62975:1:exon
so has part: feature:64487-64636:1:exon
so has part: feature:91715-91769:1:exon
so has part: feature:92674-92800:1:exon
so has part: feature:93853-94038:1:exon
so has part: feature:94684-94756:1:exon
so has part: feature:94976-95056:1:exon
so has part: feature:95920-96075:1:exon
so has part: feature:97536-97642:1:exon
so has part: feature:98960-99043:1:exon

XP_033928423.1
type: Protein
SIO_000068: ncbiprotein

position:58184:1
position: 58184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99043:1
position: 99043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58184-58293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59746-59831:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60621-60739:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62648-62712:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62875-62975:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64487-64636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91715-91769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92674-92800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93853-94038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94684-94756:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94976-95056:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95920-96075:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:97536-97642:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:98960-99043:1:exon

LOC117437883
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 99412..108349
location: region:99412-108349:1
so has part: feature:99412-108349:1:exon
subclass of: SO_0000010

117437883
type: Gene
SIO_000068: ncbigene

position:99412:1
position: 99412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108349:1
position: 108349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99412-108349:1:exon

LOC117437883
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437883
product: DDB1- and CUL4-associated factor 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072533.1
SIO_010081: LOC117437883
subclass of: SO_0000673
so part of: LOC117437883
location: join(99412..99531,106084..106239,107267..107373,108209..108349)
location: region:99412-108349:1
so has part: feature:99412-99531:1:exon
so has part: feature:106084-106239:1:exon
so has part: feature:107267-107373:1:exon
so has part: feature:108209-108349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99412-99531:1:exon

position:99531:1
position: 99531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106084-106239:1:exon

position:106084:1
position: 106084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106239:1
position: 106239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107267-107373:1:exon

position:107267:1
position: 107267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107373:1
position: 107373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:108209-108349:1:exon

position:108209:1
position: 108209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437883
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 11-like
translation: MTYRGHVVLNTLLRCRLAPPPGPGAGQYLSAACATGAVIVYDVLTGRPVRRLTNHSGCVRDVSWHPEGGALASASWDGSIRLWTYQEPDQEPMGEQRGRDPP
SIO_010081: LOC117437883
subclass of: SO_0000673
so part of: LOC117437883
location: join(106122..106239,107267..107373,108209..108292)
location: region:106122-108292:1
so has part: feature:106122-106239:1:exon
so has part: feature:107267-107373:1:exon
so has part: feature:108209-108292:1:exon

XP_033928424.1
type: Protein
SIO_000068: ncbiprotein

position:106122:1
position: 106122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108292:1
position: 108292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106122-106239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107267-107373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108209-108292:1:exon

LOC117437877
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 109460..113524
location: region:109460-113524:1
so has part: feature:109460-113524:1:exon
subclass of: SO_0000010

117437877
type: Gene
SIO_000068: ncbigene

position:109460:1
position: 109460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113524:1
position: 113524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109460-113524:1:exon

LOC117437877
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437877
product: DDB1- and CUL4-associated factor 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072524.1
SIO_010081: LOC117437877
subclass of: SO_0000673
so part of: LOC117437877
location: join(109460..109683,112236..112342,113386..113524)
location: region:109460-113524:1
so has part: feature:109460-109683:1:exon
so has part: feature:112236-112342:1:exon
so has part: feature:113386-113524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109460-109683:1:exon

position:109683:1
position: 109683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:112236-112342:1:exon

position:112236:1
position: 112236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112342:1
position: 112342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:113386-113524:1:exon

position:113386:1
position: 113386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437877
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 11-like
translation: MSLCVSMTSPPALTSPPLPGDTSLMTYRGHVVLNTLLRCRLAPPPGPGAGQYLSAACATGAVIVYDVLTGRPVRRLTNHSGCVRDVSWHPEGGALASASWDGSIRLWTYQEPDQEPMGEQRGRDPP
SIO_010081: LOC117437877
subclass of: SO_0000673
so part of: LOC117437877
location: join(109494..109683,112236..112342,113386..113469)
location: region:109494-113469:1
so has part: feature:109494-109683:1:exon
so has part: feature:112236-112342:1:exon
so has part: feature:113386-113469:1:exon

XP_033928415.1
type: Protein
SIO_000068: ncbiprotein

position:109494:1
position: 109494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113469:1
position: 113469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109494-109683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112236-112342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113386-113469:1:exon

LOC117437852
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437852
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(123211..>135483)
location: region:123211-135483:-1
so has part: feature:123211-135483:-1:exon
subclass of: SO_0000010

117437852
type: Gene
SIO_000068: ncbigene

position:123211:-1
position: 123211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135483:-1
position: 135483
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123211-135483:-1:exon

LOC117437852
type: Constant Region
subclass of: SO_0001834
RO_0002162: 13146
gene: LOC117437852
standard name: Ig mu chain C region-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
SIO_010081: LOC117437852
subclass of: SO_0000673
so part of: LOC117437852
location: complement(join(123211..123437,127774..127904,133280..133606,135201..>135483))
location: region:123211-135483:-1
so has part: feature:135201-135483:-1:exon
so has part: feature:133280-133606:-1:exon
so has part: feature:127774-127904:-1:exon
so has part: feature:123211-123437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135201-135483:-1:exon

position:135201:-1
position: 135201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133280-133606:-1:exon

position:133280:-1
position: 133280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133606:-1
position: 133606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:127774-127904:-1:exon

position:127774:-1
position: 127774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127904:-1
position: 127904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:123211-123437:-1:exon

position:123437:-1
position: 123437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437852
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437852
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig mu chain C region-like
SIO_010081: LOC117437852
subclass of: SO_0000673
so part of: LOC117437852
location: complement(join(123354..123437,127774..127904,133280..133606,135201..>135483))
location: region:123354-135483:-1
so has part: feature:135201-135483:-1:exon
so has part: feature:133280-133606:-1:exon
so has part: feature:127774-127904:-1:exon
so has part: feature:123354-123437:-1:exon

position:123354:-1
position: 123354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135201-135483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133280-133606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127774-127904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123354-123437:-1:exon

LOC117437853
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 136899..153518
location: region:136899-153518:1
so has part: feature:136899-153518:1:exon
subclass of: SO_0000010

117437853
type: Gene
SIO_000068: ncbigene

position:136899:1
position: 136899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153518:1
position: 153518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136899-153518:1:exon

LOC117437853
type: Constant Region
subclass of: SO_0001834
RO_0002162: 13146
gene: LOC117437853
standard name: Ig mu chain C region-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC117437853
subclass of: SO_0000673
so part of: LOC117437853
location: join(136899..136910,146156..146442,147660..148006,150603..150920,152958..153518)
location: region:136899-153518:1
so has part: feature:136899-136910:1:exon
so has part: feature:146156-146442:1:exon
so has part: feature:147660-148006:1:exon
so has part: feature:150603-150920:1:exon
so has part: feature:152958-153518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136899-136910:1:exon

position:136910:1
position: 136910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146156-146442:1:exon

position:146156:1
position: 146156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146442:1
position: 146442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147660-148006:1:exon

position:147660:1
position: 147660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148006:1
position: 148006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150603-150920:1:exon

position:150603:1
position: 150603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150920:1
position: 150920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152958-153518:1:exon

position:152958:1
position: 152958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437853
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437853
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig mu chain C region-like
SIO_010081: LOC117437853
subclass of: SO_0000673
so part of: LOC117437853
location: join(136899..136910,146156..146442,147660..148006,150603..150920,152958..153343)
location: region:136899-153343:1
so has part: feature:136899-136910:1:exon
so has part: feature:146156-146442:1:exon
so has part: feature:147660-148006:1:exon
so has part: feature:150603-150920:1:exon
so has part: feature:152958-153343:1:exon

position:153343:1
position: 153343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136899-136910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146156-146442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147660-148006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150603-150920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152958-153343:1:exon

LOC117437854
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(159262..182997)
location: region:159262-182997:-1
so has part: feature:159262-182997:-1:exon
subclass of: SO_0000010

117437854
type: Gene
SIO_000068: ncbigene

position:159262:-1
position: 159262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182997:-1
position: 182997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159262-182997:-1:exon

LOC117437854
type: Constant Region
subclass of: SO_0001834
RO_0002162: 13146
gene: LOC117437854
standard name: Ig mu chain C region membrane-bound form-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC117437854
subclass of: SO_0000673
so part of: LOC117437854
location: complement(join(159262..159377,160296..160423,162600..162947,166953..167049,168897..169118,182564..182862,182955..182997))
location: region:159262-182997:-1
so has part: feature:182955-182997:-1:exon
so has part: feature:182564-182862:-1:exon
so has part: feature:168897-169118:-1:exon
so has part: feature:166953-167049:-1:exon
so has part: feature:162600-162947:-1:exon
so has part: feature:160296-160423:-1:exon
so has part: feature:159262-159377:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182955-182997:-1:exon

position:182955:-1
position: 182955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182564-182862:-1:exon

position:182564:-1
position: 182564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182862:-1
position: 182862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:168897-169118:-1:exon

position:168897:-1
position: 168897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169118:-1
position: 169118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:166953-167049:-1:exon

position:166953:-1
position: 166953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167049:-1
position: 167049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:162600-162947:-1:exon

position:162600:-1
position: 162600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162947:-1
position: 162947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:160296-160423:-1:exon

position:160296:-1
position: 160296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160423:-1
position: 160423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:159262-159377:-1:exon

position:159377:-1
position: 159377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437854
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437854
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig mu chain C region membrane-bound form-like
SIO_010081: LOC117437854
subclass of: SO_0000673
so part of: LOC117437854
location: complement(join(159369..159377,160296..160423,162600..162947,166953..167049,168897..169118,182564..182862,182955..182997))
location: region:159369-182997:-1
so has part: feature:182955-182997:-1:exon
so has part: feature:182564-182862:-1:exon
so has part: feature:168897-169118:-1:exon
so has part: feature:166953-167049:-1:exon
so has part: feature:162600-162947:-1:exon
so has part: feature:160296-160423:-1:exon
so has part: feature:159369-159377:-1:exon

position:159369:-1
position: 159369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182955-182997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182564-182862:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168897-169118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166953-167049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162600-162947:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160296-160423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159369-159377:-1:exon

LOC117437855
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 188694..189197
location: region:188694-189197:1
so has part: feature:188694-189197:1:exon
subclass of: SO_0000010

117437855
type: Gene
SIO_000068: ncbigene

position:188694:1
position: 188694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189197:1
position: 189197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188694-189197:1:exon

LOC117437855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437855
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig heavy chain V region 914-like
SIO_010081: LOC117437855
subclass of: SO_0000673
so part of: LOC117437855
location: 188694..189197
location: region:188694-189197:1
so has part: feature:188694-189197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188694-189197:1:exon

LOC117437855
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 13146
gene: LOC117437855
standard name: Ig heavy chain V region 914-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 333 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC117437855
subclass of: SO_0000673
so part of: LOC117437855
location: 188694..189197
location: region:188694-189197:1
so has part: feature:188694-189197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188694-189197:1:exon

LOC117437856
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 189973..190485
location: region:189973-190485:1
so has part: feature:189973-190485:1:exon
subclass of: SO_0000010

117437856
type: Gene
SIO_000068: ncbigene

position:189973:1
position: 189973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190485:1
position: 190485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189973-190485:1:exon

LOC117437856
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437856
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin heavy variable 3-64D-like
SIO_010081: LOC117437856
subclass of: SO_0000673
so part of: LOC117437856
location: 189973..190485
location: region:189973-190485:1
so has part: feature:189973-190485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189973-190485:1:exon

LOC117437856
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 13146
gene: LOC117437856
standard name: immunoglobulin heavy variable 3-64D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 422 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC117437856
subclass of: SO_0000673
so part of: LOC117437856
location: 189973..190485
location: region:189973-190485:1
so has part: feature:189973-190485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:189973-190485:1:exon

LOC117437857
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190593..190991)
location: region:190593-190991:-1
so has part: feature:190593-190991:-1:exon
subclass of: SO_0000010

117437857
type: Gene
SIO_000068: ncbigene

position:190593:-1
position: 190593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190991:-1
position: 190991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190593-190991:-1:exon

LOC117437857
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437857
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin heavy variable 3-23-like
SIO_010081: LOC117437857
subclass of: SO_0000673
so part of: LOC117437857
location: complement(190593..190991)
location: region:190593-190991:-1
so has part: feature:190593-190991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190593-190991:-1:exon

LOC117437857
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 13146
gene: LOC117437857
standard name: immunoglobulin heavy variable 3-23-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
SIO_010081: LOC117437857
subclass of: SO_0000673
so part of: LOC117437857
location: complement(190593..190991)
location: region:190593-190991:-1
so has part: feature:190593-190991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190593-190991:-1:exon

LOC117437858
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 193464..194233
location: region:193464-194233:1
so has part: feature:193464-194233:1:exon
subclass of: SO_0000010

117437858
type: Gene
SIO_000068: ncbigene

position:193464:1
position: 193464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194233:1
position: 194233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193464-194233:1:exon

LOC117437858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437858
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig heavy chain V region 914-like
SIO_010081: LOC117437858
subclass of: SO_0000673
so part of: LOC117437858
location: join(193464..193485,193749..194233)
location: region:193464-194233:1
so has part: feature:193464-193485:1:exon
so has part: feature:193749-194233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193464-193485:1:exon

position:193485:1
position: 193485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193749-194233:1:exon

position:193749:1
position: 193749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437858
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 13146
gene: LOC117437858
standard name: Ig heavy chain V region 914-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
SIO_010081: LOC117437858
subclass of: SO_0000673
so part of: LOC117437858
location: join(193464..193485,193749..194233)
location: region:193464-194233:1
so has part: feature:193464-193485:1:exon
so has part: feature:193749-194233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193464-193485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193749-194233:1:exon

LOC117437859
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 206163..208295
location: region:206163-208295:1
so has part: feature:206163-208295:1:exon
subclass of: SO_0000010

117437859
type: Gene
SIO_000068: ncbigene

position:206163:1
position: 206163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208295:1
position: 208295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206163-208295:1:exon

LOC117437859
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437859
product: N66 matrix protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072502.1
SIO_010081: LOC117437859
subclass of: SO_0000673
so part of: LOC117437859
location: join(206163..206489,206559..207044,207075..207470,208145..208148,208271..208295)
location: region:206163-208295:1
so has part: feature:206163-206489:1:exon
so has part: feature:206559-207044:1:exon
so has part: feature:207075-207470:1:exon
so has part: feature:208145-208148:1:exon
so has part: feature:208271-208295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206163-206489:1:exon

position:206489:1
position: 206489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:206559-207044:1:exon

position:206559:1
position: 206559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207044:1
position: 207044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:207075-207470:1:exon

position:207075:1
position: 207075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207470:1
position: 207470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:208145-208148:1:exon

position:208145:1
position: 208145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208148:1
position: 208148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:208271-208295:1:exon

position:208271:1
position: 208271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437859
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N66 matrix protein-like
translation: MGNQPVNEGNGVNGGNQQLNGGNQVNGVNGGNGVNGVNVGNQVLNGGNQTLNGGNGVNGGNQALNGVNGVNGGNQTLNMGNQPVNGGNGVNGGNQALNGGNQVNGVNGGNQALNGVNGVNGGNQTLNMGNQPVNGGNQVNGANGGNQEVNVATPDLNGSKQLMDVGAQEVNGGTHNINGGSPIAINGGSPIPINGSPIPINGSPIPINGGSPIPINGTPIPINGSPIPINGSPIPTNGSPIPTNGSPIPINGSPIPINGSPIPINGGSPIPINAPRRHQRRH
SIO_010081: LOC117437859
subclass of: SO_0000673
so part of: LOC117437859
location: join(206621..207044,207075..207470,208145..208148,208271..208295)
location: region:206621-208295:1
so has part: feature:206621-207044:1:exon
so has part: feature:207075-207470:1:exon
so has part: feature:208145-208148:1:exon
so has part: feature:208271-208295:1:exon

XP_033928393.1
type: Protein
SIO_000068: ncbiprotein

position:206621:1
position: 206621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206621-207044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207075-207470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208145-208148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208271-208295:1:exon

LOC117437889
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 208350..209281
location: region:208350-209281:1
so has part: feature:208350-209281:1:exon
subclass of: SO_0000011

117437889
type: Gene
SIO_000068: ncbigene

position:208350:1
position: 208350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209281:1
position: 209281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208350-209281:1:exon

LOC117437889
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437889
product: uncharacterized LOC117437889
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004550522.1
SIO_010081: LOC117437889
subclass of: SO_0000673
so part of: LOC117437889
location: join(208350..208411,209182..209281)
location: region:208350-209281:1
so has part: feature:208350-208411:1:exon
so has part: feature:209182-209281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208350-208411:1:exon

position:208411:1
position: 208411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209182-209281:1:exon

position:209182:1
position: 209182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115945683
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 210183..229191
location: region:210183-229191:1
so has part: feature:210183-229191:1:exon
subclass of: SO_0000010

115945683
type: Gene
SIO_000068: ncbigene

position:210183:1
position: 210183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229191:1
position: 229191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210183-229191:1:exon

LOC115945683
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945683
product: methyltransferase like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072503.1
SIO_010081: LOC115945683
subclass of: SO_0000673
so part of: LOC115945683
location: join(210183..210537,212813..212975,214016..214103,214312..214460,218665..218840,220110..220323,224013..224200,225505..225543,225695..225803,227841..227906,228016..228128,229008..229191)
location: region:210183-229191:1
so has part: feature:210183-210537:1:exon
so has part: feature:212813-212975:1:exon
so has part: feature:214016-214103:1:exon
so has part: feature:214312-214460:1:exon
so has part: feature:218665-218840:1:exon
so has part: feature:220110-220323:1:exon
so has part: feature:224013-224200:1:exon
so has part: feature:225505-225543:1:exon
so has part: feature:225695-225803:1:exon
so has part: feature:227841-227906:1:exon
so has part: feature:228016-228128:1:exon
so has part: feature:229008-229191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210183-210537:1:exon

position:210537:1
position: 210537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212813-212975:1:exon

position:212813:1
position: 212813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212975:1
position: 212975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214016-214103:1:exon

position:214016:1
position: 214016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214103:1
position: 214103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214312-214460:1:exon

position:214312:1
position: 214312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214460:1
position: 214460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:218665-218840:1:exon

position:218665:1
position: 218665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218840:1
position: 218840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:220110-220323:1:exon

position:220110:1
position: 220110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220323:1
position: 220323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:224013-224200:1:exon

position:224013:1
position: 224013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224200:1
position: 224200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:225505-225543:1:exon

position:225505:1
position: 225505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225543:1
position: 225543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:225695-225803:1:exon

position:225695:1
position: 225695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225803:1
position: 225803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:227841-227906:1:exon

position:227841:1
position: 227841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227906:1
position: 227906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:228016-228128:1:exon

position:228016:1
position: 228016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228128:1
position: 228128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:229008-229191:1:exon

position:229008:1
position: 229008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115945683
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N6-adenosine-methyltransferase catalytic subunit
translation: MSDTWSSIQAHKKQLDSLRERLQRRRKQEQSGEEWGQPLTSALTSPRPRPPSDDVTAADPALERRLLLLLSDPPVTLPADADALCRVMAADDVIAPRRAVESLLQKFAAQELIEVRGGGGAEQEGGGATGGGAAGGEGLKRSRKMASDVDLEIERLLSQQSTREQQSKKVSQEILELLHASTAKEQSIVDKFRSRGRAQVQEFCDYGTKEECVRASGGERACRRLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDAGPTAAPHCPIAPAPRQRSPAPKEGGDGGVDRLFPPQWICCDIRYLDVSILGKFSVVMADPPWDIHMELPYGTLTDDEMRRLNIPVLQDEGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGKEHCLVGVKGNPQGFNRGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNVQPNWITLGNQLDGIHLLDPDVVAQFKQLYPDGVISKPKNL
SIO_010081: LOC115945683
subclass of: SO_0000673
so part of: LOC115945683
location: join(210431..210537,212813..212975,214016..214103,214312..214460,218665..218840,220110..220323,224013..224200,225505..225543,225695..225803,227841..227906,228016..228128,229008..229119)
location: region:210431-229119:1
so has part: feature:210431-210537:1:exon
so has part: feature:212813-212975:1:exon
so has part: feature:214016-214103:1:exon
so has part: feature:214312-214460:1:exon
so has part: feature:218665-218840:1:exon
so has part: feature:220110-220323:1:exon
so has part: feature:224013-224200:1:exon
so has part: feature:225505-225543:1:exon
so has part: feature:225695-225803:1:exon
so has part: feature:227841-227906:1:exon
so has part: feature:228016-228128:1:exon
so has part: feature:229008-229119:1:exon

XP_033928394.1
type: Protein
SIO_000068: ncbiprotein

position:210431:1
position: 210431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229119:1
position: 229119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210431-210537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212813-212975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214016-214103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214312-214460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218665-218840:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:220110-220323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:224013-224200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225505-225543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225695-225803:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227841-227906:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228016-228128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:229008-229119:1:exon

LOC117437860
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(231904..252196)
location: region:231904-252196:-1
so has part: feature:231904-252196:-1:exon
subclass of: SO_0000010

117437860
type: Gene
SIO_000068: ncbigene

position:231904:-1
position: 231904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252196:-1
position: 252196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231904-252196:-1:exon

LOC117437860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437860
product: TOX high mobility group box family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072504.1
SIO_010081: LOC117437860
subclass of: SO_0000673
so part of: LOC117437860
location: complement(join(231904..232125,233943..234094,236365..236414,236842..236872,238632..238703,241032..241258,241592..241628,242263..242544,244861..244937,245061..245187,247937..248005,249418..249475,252139..252196))
location: region:231904-252196:-1
so has part: feature:252139-252196:-1:exon
so has part: feature:249418-249475:-1:exon
so has part: feature:247937-248005:-1:exon
so has part: feature:245061-245187:-1:exon
so has part: feature:244861-244937:-1:exon
so has part: feature:242263-242544:-1:exon
so has part: feature:241592-241628:-1:exon
so has part: feature:241032-241258:-1:exon
so has part: feature:238632-238703:-1:exon
so has part: feature:236842-236872:-1:exon
so has part: feature:236365-236414:-1:exon
so has part: feature:233943-234094:-1:exon
so has part: feature:231904-232125:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252139-252196:-1:exon

position:252139:-1
position: 252139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:249418-249475:-1:exon

position:249418:-1
position: 249418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249475:-1
position: 249475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247937-248005:-1:exon

position:247937:-1
position: 247937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248005:-1
position: 248005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:245061-245187:-1:exon

position:245061:-1
position: 245061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245187:-1
position: 245187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:244861-244937:-1:exon

position:244861:-1
position: 244861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244937:-1
position: 244937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:242263-242544:-1:exon

position:242263:-1
position: 242263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242544:-1
position: 242544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:241592-241628:-1:exon

position:241592:-1
position: 241592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241628:-1
position: 241628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:241032-241258:-1:exon

position:241032:-1
position: 241032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241258:-1
position: 241258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:238632-238703:-1:exon

position:238632:-1
position: 238632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238703:-1
position: 238703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:236842-236872:-1:exon

position:236842:-1
position: 236842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236872:-1
position: 236872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:236365-236414:-1:exon

position:236365:-1
position: 236365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236414:-1
position: 236414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:233943-234094:-1:exon

position:233943:-1
position: 233943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234094:-1
position: 234094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:231904-232125:-1:exon

position:232125:-1
position: 232125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOX high mobility group box family member 4
translation: MEFPGGSDNFLAITGSAHPFLSGAETFHTPSLGDEEFEIPPIPLDSDVVGHFEDLGGSNGAGVGGGAAHYGVQGLEMGMGHALMEQGAGLLAMELEASMSTPYSTTPPVTIDVPIAGLLGPGQLTTIDQSELSTQLGLSLGANGGAGSGTPPPPPQAEAPPPPEERLSPPPSPTGSMQEEEAEEFRRPQNDPKLPKMTLTPPPGPCDPPRVRGKPPKKGKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRAILTSDPPRRRPLQAEEEVVEMVGGEFGGEADSPPGLAVELVPEDPPPPRCIRAGCGNPPVASGDWDEEYCSSECVVRHCRDVFLAWLAARNSSPNNVVFVK
SIO_010081: LOC117437860
subclass of: SO_0000673
so part of: LOC117437860
location: complement(join(232059..232125,233943..234094,236365..236414,236842..236872,238632..238703,241032..241258,241592..241628,242263..242544,244861..244937,245061..245187,247937..248005,249418..249423))
location: region:232059-249423:-1
so has part: feature:249418-249423:-1:exon
so has part: feature:247937-248005:-1:exon
so has part: feature:245061-245187:-1:exon
so has part: feature:244861-244937:-1:exon
so has part: feature:242263-242544:-1:exon
so has part: feature:241592-241628:-1:exon
so has part: feature:241032-241258:-1:exon
so has part: feature:238632-238703:-1:exon
so has part: feature:236842-236872:-1:exon
so has part: feature:236365-236414:-1:exon
so has part: feature:233943-234094:-1:exon
so has part: feature:232059-232125:-1:exon

XP_033928395.1
type: Protein
SIO_000068: ncbiprotein

position:232059:-1
position: 232059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249423:-1
position: 249423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249418-249423:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247937-248005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245061-245187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244861-244937:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242263-242544:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241592-241628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241032-241258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:238632-238703:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:236842-236872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236365-236414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:233943-234094:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:232059-232125:-1:exon

LOC117437861
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 249582..>340544
location: region:249582-340544:1
so has part: feature:249582-340544:1:exon
subclass of: SO_0000010

117437861
type: Gene
SIO_000068: ncbigene

position:249582:1
position: 249582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340544:1
position: 340544
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249582-340544:1:exon

LOC117437861
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437861
product: chromodomain helicase DNA binding protein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072505.1
SIO_010081: LOC117437861
subclass of: SO_0000673
so part of: LOC117437861
location: join(249582..249649,252151..252213,259384..259965,261175..261242,261848..261956,263823..264203,266633..266940,268758..268872,269946..270137,271183..271251,272623..272678,274731..274848,276587..276670,281007..281144,282710..282831,284536..284779,285992..286168,287908..288051,290347..290602,293397..293610,296408..296603,309340..309507,310497..310679,311729..311839,313691..313914,315693..315892,318681..318834,319820..319909,320799..320902,321929..322022,325030..325096,325197..325248,326280..326406,327686..327894,336061..336399,337907..337986,339141..339323,339464..339553,340449..>340544)
location: region:249582-340544:1
so has part: feature:249582-249649:1:exon
so has part: feature:252151-252213:1:exon
so has part: feature:259384-259965:1:exon
so has part: feature:261175-261242:1:exon
so has part: feature:261848-261956:1:exon
so has part: feature:263823-264203:1:exon
so has part: feature:266633-266940:1:exon
so has part: feature:268758-268872:1:exon
so has part: feature:269946-270137:1:exon
so has part: feature:271183-271251:1:exon
so has part: feature:272623-272678:1:exon
so has part: feature:274731-274848:1:exon
so has part: feature:276587-276670:1:exon
so has part: feature:281007-281144:1:exon
so has part: feature:282710-282831:1:exon
so has part: feature:284536-284779:1:exon
so has part: feature:285992-286168:1:exon
so has part: feature:287908-288051:1:exon
so has part: feature:290347-290602:1:exon
so has part: feature:293397-293610:1:exon
so has part: feature:296408-296603:1:exon
so has part: feature:309340-309507:1:exon
so has part: feature:310497-310679:1:exon
so has part: feature:311729-311839:1:exon
so has part: feature:313691-313914:1:exon
so has part: feature:315693-315892:1:exon
so has part: feature:318681-318834:1:exon
so has part: feature:319820-319909:1:exon
so has part: feature:320799-320902:1:exon
so has part: feature:321929-322022:1:exon
so has part: feature:325030-325096:1:exon
so has part: feature:325197-325248:1:exon
so has part: feature:326280-326406:1:exon
so has part: feature:327686-327894:1:exon
so has part: feature:336061-336399:1:exon
so has part: feature:337907-337986:1:exon
so has part: feature:339141-339323:1:exon
so has part: feature:339464-339553:1:exon
so has part: feature:340449-340544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249582-249649:1:exon

position:249649:1
position: 249649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252151-252213:1:exon

position:252151:1
position: 252151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252213:1
position: 252213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:259384-259965:1:exon

position:259384:1
position: 259384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259965:1
position: 259965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:261175-261242:1:exon

position:261175:1
position: 261175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261242:1
position: 261242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:261848-261956:1:exon

position:261848:1
position: 261848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261956:1
position: 261956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:263823-264203:1:exon

position:263823:1
position: 263823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264203:1
position: 264203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:266633-266940:1:exon

position:266633:1
position: 266633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266940:1
position: 266940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268758-268872:1:exon

position:268758:1
position: 268758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268872:1
position: 268872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:269946-270137:1:exon

position:269946:1
position: 269946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270137:1
position: 270137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:271183-271251:1:exon

position:271183:1
position: 271183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271251:1
position: 271251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:272623-272678:1:exon

position:272623:1
position: 272623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272678:1
position: 272678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:274731-274848:1:exon

position:274731:1
position: 274731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274848:1
position: 274848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:276587-276670:1:exon

position:276587:1
position: 276587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276670:1
position: 276670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:281007-281144:1:exon

position:281007:1
position: 281007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281144:1
position: 281144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:282710-282831:1:exon

position:282710:1
position: 282710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282831:1
position: 282831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:284536-284779:1:exon

position:284536:1
position: 284536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284779:1
position: 284779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:285992-286168:1:exon

position:285992:1
position: 285992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286168:1
position: 286168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:287908-288051:1:exon

position:287908:1
position: 287908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288051:1
position: 288051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:290347-290602:1:exon

position:290347:1
position: 290347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290602:1
position: 290602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:293397-293610:1:exon

position:293397:1
position: 293397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293610:1
position: 293610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:296408-296603:1:exon

position:296408:1
position: 296408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296603:1
position: 296603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:309340-309507:1:exon

position:309340:1
position: 309340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309507:1
position: 309507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:310497-310679:1:exon

position:310497:1
position: 310497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310679:1
position: 310679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:311729-311839:1:exon

position:311729:1
position: 311729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311839:1
position: 311839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:313691-313914:1:exon

position:313691:1
position: 313691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313914:1
position: 313914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:315693-315892:1:exon

position:315693:1
position: 315693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315892:1
position: 315892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:318681-318834:1:exon

position:318681:1
position: 318681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318834:1
position: 318834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:319820-319909:1:exon

position:319820:1
position: 319820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319909:1
position: 319909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:320799-320902:1:exon

position:320799:1
position: 320799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320902:1
position: 320902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:321929-322022:1:exon

position:321929:1
position: 321929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322022:1
position: 322022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:325030-325096:1:exon

position:325030:1
position: 325030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325096:1
position: 325096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:325197-325248:1:exon

position:325197:1
position: 325197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325248:1
position: 325248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:326280-326406:1:exon

position:326280:1
position: 326280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326406:1
position: 326406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:327686-327894:1:exon

position:327686:1
position: 327686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327894:1
position: 327894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:336061-336399:1:exon

position:336061:1
position: 336061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336399:1
position: 336399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:337907-337986:1:exon

position:337907:1
position: 337907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337986:1
position: 337986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:339141-339323:1:exon

position:339141:1
position: 339141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339323:1
position: 339323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:339464-339553:1:exon

position:339464:1
position: 339464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339553:1
position: 339553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:340449-340544:1:exon

position:340449:1
position: 340449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437861
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 8
translation: MADPIMDLFDDPNLFSLDPLADDAFGSAPSAPPPPQPITDETTPPPAPPIGPQPPDDPAAPPPDPQDRDLIGQLNPFMGAAPPPPPSCPAPPKLLLLKPADVTSPAPDAASPAPPKVTLAKVLVGAGPGGGASVATPTNAVHRLVQTARPVKQLVLQPVKAGGGAKGGGATAVAATANQGDPKRITLLLQQPPGQRPLLLATVTPSASPCCCSSPQASAPCCWPRDKDTPPSGLATPPGDPKRITLLLQQPPGQRPLLLGTLPGKLLLQTPPKDTPPSGPSPAPSGSSHAPSASSHAPSGPSPAPSKVVTIQLQVQHPPHGTAPHRIQLVPGGGGQGAPIAVASGLATGAGQRVTVPLKVVLQPQPAPLRPPDESRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPHVRPEEEAERRRRRKGERGTGGTGGAGGAGKEERGRRGKGQGARSKGRSKASTITPVVGKKRKRNPSSDTSDTEALPAPAPRLEEEPSVQKRRSNRQVKRKKYTEDLDIKITDDEEEEEEELDVIGPTRPPVTPVPPVPPEAEGGALPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSGQSVETEEFFVKYKNYSYLHCEWATIDQLEKDKRIHQKLKRFKTKMSQMRHFFHEDEEPFNPDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDSTWELQEDVDEAKIEEFKRIQARIPELKRVPRPQAGAWKKLEPCQEYKNQNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQQVHGSGVHGPFLVIAPLSTIANWEREFGAWTHMNTIVYHGSLASRQMIQQYEMYCKDARGRLIPGAYKFDALITTFEMILSECPELREIEWRCVVIDEAHRLKNRHCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSEAEFLKDFGDLKTEEQVQQLQALLKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKRFYRAILERNFSFLARGAGAANMPNLLNTMMELRKCCNHPYLINGAEEKILSEFRASCPTAAPQTLALQALVRSAGKLVLLDKLLPKLRAGGHKVLLFSQMVRCLDILEDYLIHKRYPYERLDGRVRGHLRQAAIDRFSRADSERFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQCKAVKVYRLITRSSYEREMFDKASLKLGLDRAVLQSMSNREGAIAGPMQQLSKKEIEDLLRRGAYAAIMEEDDEGSKFCEEDIDQILLRRATTITIESQGQGSTFAKASFVASENRTDIALDDPNFWQKWAKKADLDPELLNSKDPLVLDTPRLRRQTRPFKALRDEDLAELSELESEEEERPRPPRRPHPPQATPPAPQRPCGREDSLRLHRHLMTYGWGRWQELLSSGRLKRRLLEREARAGAAAILATCLALGHGQGSLGAFVWGLLAPAENGRSRDGPGNSGASGSRGRKSRKGKVPIGCSDSQPLEWLRRQRPEQLLQDEGHRQHLQLHGHKLLLRVRMLHYLRHEVVGEHAQRVLAGAKASSIDLWVPALEHPDAPAPWWDPEADKSLLLGVFKHGWGRFQAMRSDPALCFLSRAGGPEHRALQEERADLDDPEYQPLMGPSQEDEEDEQDPLGMLDEEISVDGDEAPPCWWPPPSALSLRLRQLLGAWERERERRRRLREPRRDKDRRWSRREQAAFFRVASTFGVELDPGSGRFRWSRFRLLSRLERRSDTELTRFYHGFVAMCRQVCRLPPAPGDEPPDPSLTVFPVSPSRASRGLRRLSLLRLVREQVLVHPLLPARLSLCPQPGPELPRWWQRGRHDGELLRGAARHGLAHPQGSILPDPELSFAAARGRFMREREGSKEGSDEERGEGGAPSSRPPPPPRPPRPRHLQEWPKDRALIRRLELVCRAVLSGEWPKEDTPPAPPPLAPPPMDPPALPPPPRPRHEDKEFTVQIKDEEGLKLTFQKHRLGPNGAAPPKKSSKKMV…
SIO_010081: LOC117437861
subclass of: SO_0000673
so part of: LOC117437861
location: join(259429..259965,261175..261242,261848..261956,263823..264203,266633..266940,268758..268872,269946..270137,271183..271251,272623..272678,274731..274848,276587..276670,281007..281144,282710..282831,284536..284779,285992..286168,287908..288051,290347..290602,293397..293610,296408..296603,309340..309507,310497..310679,311729..311839,313691..313914,315693..315892,318681..318834,319820..319909,320799..320902,321929..322022,325030..325096,325197..325248,326280..326406,327686..327894,336061..336399,337907..337986,339141..339323,339464..339553,340449..>340544)
location: region:259429-340544:1
so has part: feature:259429-259965:1:exon
so has part: feature:261175-261242:1:exon
so has part: feature:261848-261956:1:exon
so has part: feature:263823-264203:1:exon
so has part: feature:266633-266940:1:exon
so has part: feature:268758-268872:1:exon
so has part: feature:269946-270137:1:exon
so has part: feature:271183-271251:1:exon
so has part: feature:272623-272678:1:exon
so has part: feature:274731-274848:1:exon
so has part: feature:276587-276670:1:exon
so has part: feature:281007-281144:1:exon
so has part: feature:282710-282831:1:exon
so has part: feature:284536-284779:1:exon
so has part: feature:285992-286168:1:exon
so has part: feature:287908-288051:1:exon
so has part: feature:290347-290602:1:exon
so has part: feature:293397-293610:1:exon
so has part: feature:296408-296603:1:exon
so has part: feature:309340-309507:1:exon
so has part: feature:310497-310679:1:exon
so has part: feature:311729-311839:1:exon
so has part: feature:313691-313914:1:exon
so has part: feature:315693-315892:1:exon
so has part: feature:318681-318834:1:exon
so has part: feature:319820-319909:1:exon
so has part: feature:320799-320902:1:exon
so has part: feature:321929-322022:1:exon
so has part: feature:325030-325096:1:exon
so has part: feature:325197-325248:1:exon
so has part: feature:326280-326406:1:exon
so has part: feature:327686-327894:1:exon
so has part: feature:336061-336399:1:exon
so has part: feature:337907-337986:1:exon
so has part: feature:339141-339323:1:exon
so has part: feature:339464-339553:1:exon
so has part: feature:340449-340544:1:exon

XP_033928396.1
type: Protein
SIO_000068: ncbiprotein

position:259429:1
position: 259429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259429-259965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261175-261242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261848-261956:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263823-264203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266633-266940:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268758-268872:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269946-270137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:271183-271251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272623-272678:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:274731-274848:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:276587-276670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:281007-281144:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:282710-282831:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:284536-284779:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:285992-286168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:287908-288051:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:290347-290602:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:293397-293610:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:296408-296603:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:309340-309507:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:310497-310679:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:311729-311839:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:313691-313914:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:315693-315892:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:318681-318834:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:319820-319909:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:320799-320902:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:321929-322022:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:325030-325096:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:325197-325248:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:326280-326406:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:327686-327894:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:336061-336399:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:337907-337986:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:339141-339323:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:339464-339553:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:340449-340544:1:exon

LOC117437878
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 330205..335517
location: region:330205-335517:1
so has part: feature:330205-335517:1:exon
subclass of: SO_0000010

117437878
type: Gene
SIO_000068: ncbigene

position:330205:1
position: 330205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335517:1
position: 335517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330205-335517:1:exon

LOC117437878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437878
product: chromodomain-helicase-DNA-binding protein 8-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072525.1
SIO_010081: LOC117437878
subclass of: SO_0000673
so part of: LOC117437878
location: join(330205..330332,335207..335517)
location: region:330205-335517:1
so has part: feature:330205-330332:1:exon
so has part: feature:335207-335517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330205-330332:1:exon

position:330332:1
position: 330332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335207-335517:1:exon

position:335207:1
position: 335207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437878
product: chromodomain-helicase-DNA-binding protein 8-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072527.1
SIO_010081: LOC117437878
subclass of: SO_0000673
so part of: LOC117437878
location: join(330205..330332,333357..333649)
location: region:330205-333649:1
so has part: feature:330205-330332:1:exon
so has part: feature:333357-333649:1:exon

position:333649:1
position: 333649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330205-330332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333357-333649:1:exon

position:333357:1
position: 333357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 8-like isoform X1
translation: MCRQVCRLPPAPGDEPPDPSLTVFPVSPSRASRGLRRLSLLRLVREQVLVHPLLPARLSLCPQPGPELPRWWQRGRHDGELLRGAARHGLAHPQGSILPAP
SIO_010081: LOC117437878
subclass of: SO_0000673
so part of: LOC117437878
location: join(330290..330332,335207..335469)
location: region:330290-335469:1
so has part: feature:330290-330332:1:exon
so has part: feature:335207-335469:1:exon

XP_033928416.1
type: Protein
SIO_000068: ncbiprotein

position:330290:1
position: 330290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335469:1
position: 335469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330290-330332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335207-335469:1:exon

LOC117437878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 8-like isoform X3
translation: MCRQVCRLPPAPGDEPPDPSLTVFPVSPSRASRGLRRLSLLRLVREQVLVHPLLPARLSLCPQPGPELPRWWQRGRHDGELLRGAARHGLAHPQGSILPAP
SIO_010081: LOC117437878
subclass of: SO_0000673
so part of: LOC117437878
location: join(330290..330332,333357..333619)
location: region:330290-333619:1
so has part: feature:330290-330332:1:exon
so has part: feature:333357-333619:1:exon

XP_033928418.1
type: Protein
SIO_000068: ncbiprotein

position:333619:1
position: 333619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330290-330332:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333357-333619:1:exon

LOC117437878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437878
product: chromodomain-helicase-DNA-binding protein 8-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072526.1
SIO_010081: LOC117437878
subclass of: SO_0000673
so part of: LOC117437878
location: join(331199..331326,335207..335517)
location: region:331199-335517:1
so has part: feature:331199-331326:1:exon
so has part: feature:335207-335517:1:exon

position:331199:1
position: 331199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331199-331326:1:exon

position:331326:1
position: 331326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335207-335517:1:exon

LOC117437878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437878
product: chromodomain-helicase-DNA-binding protein 8-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072528.1
SIO_010081: LOC117437878
subclass of: SO_0000673
so part of: LOC117437878
location: join(331199..331326,334293..334585)
location: region:331199-334585:1
so has part: feature:331199-331326:1:exon
so has part: feature:334293-334585:1:exon

position:334585:1
position: 334585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331199-331326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334293-334585:1:exon

position:334293:1
position: 334293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437878
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC117437878
product: chromodomain-helicase-DNA-binding protein 8-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004550519.1
SIO_010081: LOC117437878
so part of: LOC117437878
location: join(331199..331326,333357..333389)
location: region:331199-333389:1
so has part: feature:331199-331326:1:exon
so has part: feature:333357-333389:1:exon

position:333389:1
position: 333389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331199-331326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333357-333389:1:exon

LOC117437878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 8-like isoform X2
translation: MCRQVCRLPPASGDEPPDPSLTVFPVSPSRASRGLRRLSLLRLVREQVLVHPLLPARLSLCPQPGPELPRWWQRGRHDGELLRGAARHGLAHPQGSILPAP
SIO_010081: LOC117437878
subclass of: SO_0000673
so part of: LOC117437878
location: join(331284..331326,335207..335469)
location: region:331284-335469:1
so has part: feature:331284-331326:1:exon
so has part: feature:335207-335469:1:exon

XP_033928417.1
type: Protein
SIO_000068: ncbiprotein

position:331284:1
position: 331284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331284-331326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335207-335469:1:exon

LOC117437878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 8-like isoform X4
translation: MCRQVCRLPPASGDEPPDPSLTVFPVSPSRASRGLRRLSLLRLVREQVLVHPLLPARLSLCPQPGPELPRWWQRGRHDGELLRGAARHGLAHPQGSILPAP
SIO_010081: LOC117437878
subclass of: SO_0000673
so part of: LOC117437878
location: join(331284..331326,334293..334555)
location: region:331284-334555:1
so has part: feature:331284-331326:1:exon
so has part: feature:334293-334555:1:exon

XP_033928419.1
type: Protein
SIO_000068: ncbiprotein

position:334555:1
position: 334555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331284-331326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334293-334555:1:exon

LOC117437875
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 346018..393896
location: region:346018-393896:1
so has part: feature:346018-393896:1:exon
subclass of: SO_0000010

117437875
type: Gene
SIO_000068: ncbigene

position:346018:1
position: 346018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393896:1
position: 393896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346018-393896:1:exon

LOC117437875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437875
product: SPT16 homolog, facilitates chromatin remodeling subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072520.1
SIO_010081: LOC117437875
subclass of: SO_0000673
so part of: LOC117437875
location: join(346018..346141,349651..349743,351654..351824,352783..352935,356677..356823,361014..361165,363232..363404,365648..365738,366921..366994,368213..368325,369775..369840,371166..371261,371907..372022,373257..373410,377624..377751,379556..379691,381246..381372,382832..382950,384642..384767,385878..385990,386492..386567,388247..388416,390514..390643,391183..391312,392143..392220,393715..393896)
location: region:346018-393896:1
so has part: feature:346018-346141:1:exon
so has part: feature:349651-349743:1:exon
so has part: feature:351654-351824:1:exon
so has part: feature:352783-352935:1:exon
so has part: feature:356677-356823:1:exon
so has part: feature:361014-361165:1:exon
so has part: feature:363232-363404:1:exon
so has part: feature:365648-365738:1:exon
so has part: feature:366921-366994:1:exon
so has part: feature:368213-368325:1:exon
so has part: feature:369775-369840:1:exon
so has part: feature:371166-371261:1:exon
so has part: feature:371907-372022:1:exon
so has part: feature:373257-373410:1:exon
so has part: feature:377624-377751:1:exon
so has part: feature:379556-379691:1:exon
so has part: feature:381246-381372:1:exon
so has part: feature:382832-382950:1:exon
so has part: feature:384642-384767:1:exon
so has part: feature:385878-385990:1:exon
so has part: feature:386492-386567:1:exon
so has part: feature:388247-388416:1:exon
so has part: feature:390514-390643:1:exon
so has part: feature:391183-391312:1:exon
so has part: feature:392143-392220:1:exon
so has part: feature:393715-393896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346018-346141:1:exon

position:346141:1
position: 346141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:349651-349743:1:exon

position:349651:1
position: 349651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349743:1
position: 349743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:351654-351824:1:exon

position:351654:1
position: 351654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351824:1
position: 351824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:352783-352935:1:exon

position:352783:1
position: 352783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352935:1
position: 352935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:356677-356823:1:exon

position:356677:1
position: 356677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356823:1
position: 356823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:361014-361165:1:exon

position:361014:1
position: 361014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361165:1
position: 361165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:363232-363404:1:exon

position:363232:1
position: 363232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363404:1
position: 363404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:365648-365738:1:exon

position:365648:1
position: 365648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365738:1
position: 365738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:366921-366994:1:exon

position:366921:1
position: 366921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366994:1
position: 366994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:368213-368325:1:exon

position:368213:1
position: 368213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368325:1
position: 368325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:369775-369840:1:exon

position:369775:1
position: 369775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369840:1
position: 369840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:371166-371261:1:exon

position:371166:1
position: 371166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371261:1
position: 371261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:371907-372022:1:exon

position:371907:1
position: 371907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372022:1
position: 372022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:373257-373410:1:exon

position:373257:1
position: 373257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373410:1
position: 373410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:377624-377751:1:exon

position:377624:1
position: 377624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377751:1
position: 377751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:379556-379691:1:exon

position:379556:1
position: 379556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379691:1
position: 379691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:381246-381372:1:exon

position:381246:1
position: 381246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381372:1
position: 381372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:382832-382950:1:exon

position:382832:1
position: 382832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382950:1
position: 382950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:384642-384767:1:exon

position:384642:1
position: 384642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384767:1
position: 384767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:385878-385990:1:exon

position:385878:1
position: 385878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385990:1
position: 385990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:386492-386567:1:exon

position:386492:1
position: 386492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386567:1
position: 386567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:388247-388416:1:exon

position:388247:1
position: 388247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388416:1
position: 388416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:390514-390643:1:exon

position:390514:1
position: 390514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390643:1
position: 390643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:391183-391312:1:exon

position:391183:1
position: 391183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391312:1
position: 391312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:392143-392220:1:exon

position:392143:1
position: 392143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392220:1
position: 392220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:393715-393896:1:exon

position:393715:1
position: 393715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437875
product: SPT16 homolog, facilitates chromatin remodeling subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072521.1
SIO_010081: LOC117437875
subclass of: SO_0000673
so part of: LOC117437875
location: join(346018..346141,349651..349743,351654..351824,352783..352935,356677..356823,361014..361075,361730..361819,363232..363404,365648..365738,366921..366994,368213..368325,369775..369840,371166..371261,371907..372022,373257..373410,377624..377751,379556..379691,381246..381372,382832..382950,384642..384767,385878..385990,386492..386567,388247..388416,390514..390643,391183..391312,392143..392220,393715..393896)
location: region:346018-393896:1
so has part: feature:346018-346141:1:exon
so has part: feature:349651-349743:1:exon
so has part: feature:351654-351824:1:exon
so has part: feature:352783-352935:1:exon
so has part: feature:356677-356823:1:exon
so has part: feature:361014-361075:1:exon
so has part: feature:361730-361819:1:exon
so has part: feature:363232-363404:1:exon
so has part: feature:365648-365738:1:exon
so has part: feature:366921-366994:1:exon
so has part: feature:368213-368325:1:exon
so has part: feature:369775-369840:1:exon
so has part: feature:371166-371261:1:exon
so has part: feature:371907-372022:1:exon
so has part: feature:373257-373410:1:exon
so has part: feature:377624-377751:1:exon
so has part: feature:379556-379691:1:exon
so has part: feature:381246-381372:1:exon
so has part: feature:382832-382950:1:exon
so has part: feature:384642-384767:1:exon
so has part: feature:385878-385990:1:exon
so has part: feature:386492-386567:1:exon
so has part: feature:388247-388416:1:exon
so has part: feature:390514-390643:1:exon
so has part: feature:391183-391312:1:exon
so has part: feature:392143-392220:1:exon
so has part: feature:393715-393896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346018-346141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349651-349743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351654-351824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352783-352935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356677-356823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361014-361075:1:exon

position:361075:1
position: 361075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:361730-361819:1:exon

position:361730:1
position: 361730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361819:1
position: 361819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:363232-363404:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:365648-365738:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:366921-366994:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:368213-368325:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:369775-369840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371166-371261:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:371907-372022:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:373257-373410:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377624-377751:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:379556-379691:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:381246-381372:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:382832-382950:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:384642-384767:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:385878-385990:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:386492-386567:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:388247-388416:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390514-390643:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:391183-391312:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:392143-392220:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:393715-393896:1:exon

LOC117437875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437875
product: SPT16 homolog, facilitates chromatin remodeling subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072522.1
SIO_010081: LOC117437875
subclass of: SO_0000673
so part of: LOC117437875
location: join(346018..346141,349651..349743,351654..351824,352783..352935,356677..356823,361014..361165,363232..363404,365648..365738,366921..366994,368213..368325,369775..369840,371166..371261,371907..372022,373257..373410,377624..377751,379556..379691,381246..381372,382832..382950,384642..384767,385878..385990,386492..386567,388247..388357,388794..388870)
location: region:346018-388870:1
so has part: feature:346018-346141:1:exon
so has part: feature:349651-349743:1:exon
so has part: feature:351654-351824:1:exon
so has part: feature:352783-352935:1:exon
so has part: feature:356677-356823:1:exon
so has part: feature:361014-361165:1:exon
so has part: feature:363232-363404:1:exon
so has part: feature:365648-365738:1:exon
so has part: feature:366921-366994:1:exon
so has part: feature:368213-368325:1:exon
so has part: feature:369775-369840:1:exon
so has part: feature:371166-371261:1:exon
so has part: feature:371907-372022:1:exon
so has part: feature:373257-373410:1:exon
so has part: feature:377624-377751:1:exon
so has part: feature:379556-379691:1:exon
so has part: feature:381246-381372:1:exon
so has part: feature:382832-382950:1:exon
so has part: feature:384642-384767:1:exon
so has part: feature:385878-385990:1:exon
so has part: feature:386492-386567:1:exon
so has part: feature:388247-388357:1:exon
so has part: feature:388794-388870:1:exon

position:388870:1
position: 388870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346018-346141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349651-349743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351654-351824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352783-352935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356677-356823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361014-361165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363232-363404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365648-365738:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:366921-366994:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368213-368325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:369775-369840:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371166-371261:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371907-372022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:373257-373410:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:377624-377751:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379556-379691:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:381246-381372:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:382832-382950:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:384642-384767:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:385878-385990:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:386492-386567:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:388247-388357:1:exon

position:388357:1
position: 388357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:388794-388870:1:exon

position:388794:1
position: 388794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SPT16 isoform X1
translation: MALSLDRDALYRRLRRLYGTWERGEEELAGVDAIVVAVGVDEEIVYAKSTALQTWLFGYELTDTILVFCAQRILFMASKKKVEFLKQVAQGKGNEGGNGVPAISLLVREKTESNQANFDRLLEALRGSRGGKRLGVFSKDHFPGDFLRAWNECLSREPFEKVDISAAVAYTMAAKEEGEVHLMRKAAAITSELFTRFFKERVMEIVDADEKVRHSKLAEAVEKALEDKRFLCGAEPAAVELCYPPIIQSGGRYSLKFSVVSDRHPLHFGAVTCAMGVRYRSYCSNLVRTLLVDPGPEAQELYGFLLTLHERLLREMRPGTKLCDVYSSVMDVVKRQRPELLGKITKNLGFAMGIEFREGSLVINSKNQQRLKKGMVFSVHVGLSELQNRSGRRPEDRSYAIFIGDTVLVEEEGPATVLTSVKKKVKNVGIFLKNEDEEEEEEAKDEAEDLLGRSSRAALLTERTRNELTAEERRRAHQKELAAQLNEEARRRLTQQRGEQQVQRARKSNVSYRSPSLLPREPQVRELKLFIDKKYESVLVPVFGIAAPFHIATIKNISMSVEGDYTYLRINFYCPGSALGRNEGNLFPNPEATFVKEITYRASNLKSPGEAAVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGALEAHVNGFRFTSVRGDKVDILYNNIKHAVFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKSAFKNFIEKVEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNCTEWPPFVVTLDELELIHFERVQFHLKNFDMVLVYKDYGRKVTMINAIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPEGEGSDADVGESESEMEDETFNPSEEDYEEEEEDSDEDYSSEAEESEYSKESLGSEEESGKDWDELEEEARKADRESQYEEEEERGRGRKRKAPGGRRGTHRPPSGPPKKKRK
SIO_010081: LOC117437875
subclass of: SO_0000673
so part of: LOC117437875
location: join(346076..346141,349651..349743,351654..351824,352783..352935,356677..356823,361014..361165,363232..363404,365648..365738,366921..366994,368213..368325,369775..369840,371166..371261,371907..372022,373257..373410,377624..377751,379556..379691,381246..381372,382832..382950,384642..384767,385878..385990,386492..386567,388247..388416,390514..390643,391183..391312,392143..392220,393715..393839)
location: region:346076-393839:1
so has part: feature:346076-346141:1:exon
so has part: feature:349651-349743:1:exon
so has part: feature:351654-351824:1:exon
so has part: feature:352783-352935:1:exon
so has part: feature:356677-356823:1:exon
so has part: feature:361014-361165:1:exon
so has part: feature:363232-363404:1:exon
so has part: feature:365648-365738:1:exon
so has part: feature:366921-366994:1:exon
so has part: feature:368213-368325:1:exon
so has part: feature:369775-369840:1:exon
so has part: feature:371166-371261:1:exon
so has part: feature:371907-372022:1:exon
so has part: feature:373257-373410:1:exon
so has part: feature:377624-377751:1:exon
so has part: feature:379556-379691:1:exon
so has part: feature:381246-381372:1:exon
so has part: feature:382832-382950:1:exon
so has part: feature:384642-384767:1:exon
so has part: feature:385878-385990:1:exon
so has part: feature:386492-386567:1:exon
so has part: feature:388247-388416:1:exon
so has part: feature:390514-390643:1:exon
so has part: feature:391183-391312:1:exon
so has part: feature:392143-392220:1:exon
so has part: feature:393715-393839:1:exon

XP_033928411.1
type: Protein
SIO_000068: ncbiprotein

position:346076:1
position: 346076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393839:1
position: 393839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346076-346141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349651-349743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351654-351824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352783-352935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356677-356823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361014-361165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363232-363404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365648-365738:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:366921-366994:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368213-368325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:369775-369840:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371166-371261:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371907-372022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:373257-373410:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:377624-377751:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379556-379691:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:381246-381372:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:382832-382950:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:384642-384767:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:385878-385990:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:386492-386567:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:388247-388416:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:390514-390643:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:391183-391312:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:392143-392220:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:393715-393839:1:exon

LOC117437875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SPT16 isoform X2
translation: MALSLDRDALYRRLRRLYGTWERGEEELAGVDAIVVAVGVDEEIVYAKSTALQTWLFGYELTDTILVFCAQRILFMASKKKVEFLKQVAQGKGNEGGNGVPAISLLVREKTESNQANFDRLLEALRGSRGGKRLGVFSKDHFPGDFLRAWNECLSREPFEKVDISAAVAYTMAAKEEGEVHLMRKAAAITSELFTRFFKERVMEIVDADEKVRHSKLAEAVEKALEDKRFLCGAEPAAVELCYPPIIQSGGRYSLKFSVVSDRHPLHFGAVTCAMGVRYRSYCSNLVRTLLVDPGPEAQELYGFLLTLHERLLREMRPGTKLCDVYSSVMDVVKRQRPELLGKITKNLGFAMGIEFREGSLVINSKNQQRLKKGMVFSVHVGLSELQNRSGRRPEDRSYAIFIGDTVLVEEEGPATVLTSVKKKVKNVGIFLKNEDEEEEEEAKDEAEDLLGRSSRAALLTERTRNELTAEERRRAHQKELAAQLNEEARRRLTQQRGEQQVQRARKSNVSYRSPSLLPREPQVRELKLFIDKKYESVLVPVFGIAAPFHIATIKNISMSVEGDYTYLRINFYCPGSALGRNEGNLFPNPEATFVKEITYRASNLKSPGEAAVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGALEAHVNGFRFTSVRGDKVDILYNNIKHAVFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKSAFKNFIEKVEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNCTEWPPFVVTLDELELIHFERVQFHLKNFDMVLVYKDYGRKVTMINAIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPEGEGSDADVGESESEMEDETFNPSEEDYEEEEEDSDEDYSSEAEESEYSKESLGSEEESGKDWDELEEEARKADRESQYEEEEERGRGRKRKAPGGRRGTHRPPSGPPKKKRK
SIO_010081: LOC117437875
subclass of: SO_0000673
so part of: LOC117437875
location: join(346076..346141,349651..349743,351654..351824,352783..352935,356677..356823,361014..361075,361730..361819,363232..363404,365648..365738,366921..366994,368213..368325,369775..369840,371166..371261,371907..372022,373257..373410,377624..377751,379556..379691,381246..381372,382832..382950,384642..384767,385878..385990,386492..386567,388247..388416,390514..390643,391183..391312,392143..392220,393715..393839)
location: region:346076-393839:1
so has part: feature:346076-346141:1:exon
so has part: feature:349651-349743:1:exon
so has part: feature:351654-351824:1:exon
so has part: feature:352783-352935:1:exon
so has part: feature:356677-356823:1:exon
so has part: feature:361014-361075:1:exon
so has part: feature:361730-361819:1:exon
so has part: feature:363232-363404:1:exon
so has part: feature:365648-365738:1:exon
so has part: feature:366921-366994:1:exon
so has part: feature:368213-368325:1:exon
so has part: feature:369775-369840:1:exon
so has part: feature:371166-371261:1:exon
so has part: feature:371907-372022:1:exon
so has part: feature:373257-373410:1:exon
so has part: feature:377624-377751:1:exon
so has part: feature:379556-379691:1:exon
so has part: feature:381246-381372:1:exon
so has part: feature:382832-382950:1:exon
so has part: feature:384642-384767:1:exon
so has part: feature:385878-385990:1:exon
so has part: feature:386492-386567:1:exon
so has part: feature:388247-388416:1:exon
so has part: feature:390514-390643:1:exon
so has part: feature:391183-391312:1:exon
so has part: feature:392143-392220:1:exon
so has part: feature:393715-393839:1:exon

XP_033928412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346076-346141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349651-349743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351654-351824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352783-352935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356677-356823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361014-361075:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:361730-361819:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:363232-363404:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:365648-365738:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:366921-366994:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:368213-368325:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:369775-369840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371166-371261:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:371907-372022:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:373257-373410:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377624-377751:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:379556-379691:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:381246-381372:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:382832-382950:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:384642-384767:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:385878-385990:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:386492-386567:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:388247-388416:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390514-390643:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:391183-391312:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:392143-392220:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:393715-393839:1:exon

LOC117437875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SPT16 isoform X3
translation: MALSLDRDALYRRLRRLYGTWERGEEELAGVDAIVVAVGVDEEIVYAKSTALQTWLFGYELTDTILVFCAQRILFMASKKKVEFLKQVAQGKGNEGGNGVPAISLLVREKTESNQANFDRLLEALRGSRGGKRLGVFSKDHFPGDFLRAWNECLSREPFEKVDISAAVAYTMAAKEEGEVHLMRKAAAITSELFTRFFKERVMEIVDADEKVRHSKLAEAVEKALEDKRFLCGAEPAAVELCYPPIIQSGGRYSLKFSVVSDRHPLHFGAVTCAMGVRYRSYCSNLVRTLLVDPGPEAQELYGFLLTLHERLLREMRPGTKLCDVYSSVMDVVKRQRPELLGKITKNLGFAMGIEFREGSLVINSKNQQRLKKGMVFSVHVGLSELQNRSGRRPEDRSYAIFIGDTVLVEEEGPATVLTSVKKKVKNVGIFLKNEDEEEEEEAKDEAEDLLGRSSRAALLTERTRNELTAEERRRAHQKELAAQLNEEARRRLTQQRGEQQVQRARKSNVSYRSPSLLPREPQVRELKLFIDKKYESVLVPVFGIAAPFHIATIKNISMSVEGDYTYLRINFYCPGSALGRNEGNLFPNPEATFVKEITYRASNLKSPGEAAVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGALEAHVNGFRFTSVRGDKVDILYNNIKHAVFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKSAFKNFIEKVEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNCTEWPPFVVTLDELELIHFERVQFHLKNFDMVLVYKDYGRKVTMINAIPVASLDPIKEWLK
SIO_010081: LOC117437875
subclass of: SO_0000673
so part of: LOC117437875
location: join(346076..346141,349651..349743,351654..351824,352783..352935,356677..356823,361014..361165,363232..363404,365648..365738,366921..366994,368213..368325,369775..369840,371166..371261,371907..372022,373257..373410,377624..377751,379556..379691,381246..381372,382832..382950,384642..384767,385878..385990,386492..386567,388247..388357,388794..388856)
location: region:346076-388856:1
so has part: feature:346076-346141:1:exon
so has part: feature:349651-349743:1:exon
so has part: feature:351654-351824:1:exon
so has part: feature:352783-352935:1:exon
so has part: feature:356677-356823:1:exon
so has part: feature:361014-361165:1:exon
so has part: feature:363232-363404:1:exon
so has part: feature:365648-365738:1:exon
so has part: feature:366921-366994:1:exon
so has part: feature:368213-368325:1:exon
so has part: feature:369775-369840:1:exon
so has part: feature:371166-371261:1:exon
so has part: feature:371907-372022:1:exon
so has part: feature:373257-373410:1:exon
so has part: feature:377624-377751:1:exon
so has part: feature:379556-379691:1:exon
so has part: feature:381246-381372:1:exon
so has part: feature:382832-382950:1:exon
so has part: feature:384642-384767:1:exon
so has part: feature:385878-385990:1:exon
so has part: feature:386492-386567:1:exon
so has part: feature:388247-388357:1:exon
so has part: feature:388794-388856:1:exon

XP_033928413.1
type: Protein
SIO_000068: ncbiprotein

position:388856:1
position: 388856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346076-346141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349651-349743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:351654-351824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:352783-352935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356677-356823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361014-361165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363232-363404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365648-365738:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:366921-366994:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368213-368325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:369775-369840:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371166-371261:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371907-372022:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:373257-373410:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:377624-377751:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379556-379691:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:381246-381372:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:382832-382950:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:384642-384767:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:385878-385990:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:386492-386567:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:388247-388357:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:388794-388856:1:exon

LOC117437880
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 396787..400478
location: region:396787-400478:1
so has part: feature:396787-400478:1:exon
subclass of: SO_0000011

117437880
type: Gene
SIO_000068: ncbigene

position:396787:1
position: 396787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400478:1
position: 400478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396787-400478:1:exon

LOC117437880
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437880
product: uncharacterized LOC117437880
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004550520.1
SIO_010081: LOC117437880
subclass of: SO_0000673
so part of: LOC117437880
location: join(396787..396853,399930..399952,400408..400478)
location: region:396787-400478:1
so has part: feature:396787-396853:1:exon
so has part: feature:399930-399952:1:exon
so has part: feature:400408-400478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396787-396853:1:exon

position:396853:1
position: 396853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399930-399952:1:exon

position:399930:1
position: 399930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399952:1
position: 399952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:400408-400478:1:exon

position:400408:1
position: 400408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437862
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 403168..410637
location: region:403168-410637:1
so has part: feature:403168-410637:1:exon
subclass of: SO_0000010

117437862
type: Gene
SIO_000068: ncbigene

position:403168:1
position: 403168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410637:1
position: 410637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403168-410637:1:exon

LOC117437862
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437862
product: heterogeneous nuclear ribonucleoprotein C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 23 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072506.1
SIO_010081: LOC117437862
subclass of: SO_0000673
so part of: LOC117437862
location: join(403168..403436,404816..404891,405059..405106,405969..406126,407944..408045,409050..409216,410301..410637)
location: region:403168-410637:1
so has part: feature:403168-403436:1:exon
so has part: feature:404816-404891:1:exon
so has part: feature:405059-405106:1:exon
so has part: feature:405969-406126:1:exon
so has part: feature:407944-408045:1:exon
so has part: feature:409050-409216:1:exon
so has part: feature:410301-410637:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:403168-403436:1:exon

position:403436:1
position: 403436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:404816-404891:1:exon

position:404816:1
position: 404816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404891:1
position: 404891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405059-405106:1:exon

position:405059:1
position: 405059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405106:1
position: 405106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:405969-406126:1:exon

position:405969:1
position: 405969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406126:1
position: 406126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:407944-408045:1:exon

position:407944:1
position: 407944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408045:1
position: 408045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:409050-409216:1:exon

position:409050:1
position: 409050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409216:1
position: 409216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:410301-410637:1:exon

position:410301:1
position: 410301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437862
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFGKYGKIVGCSVHKGFAFVQFVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAELYGSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSFNSKSGQRGSSSKSSKVKGDDLQSIKKELSQIKQKVDALLESLERLEREQKLKSDKAEEELCGGGAGAGGGAKKEEGSGGGGKDGDDSPEEGDLEEEEPEEREHEQLESLKGDEKEAEEGEDDRDSANGEDDS
SIO_010081: LOC117437862
subclass of: SO_0000673
so part of: LOC117437862
location: join(403196..403436,404816..404891,405059..405106,405969..406126,407944..408045,409050..409216,410301..410384)
location: region:403196-410384:1
so has part: feature:403196-403436:1:exon
so has part: feature:404816-404891:1:exon
so has part: feature:405059-405106:1:exon
so has part: feature:405969-406126:1:exon
so has part: feature:407944-408045:1:exon
so has part: feature:409050-409216:1:exon
so has part: feature:410301-410384:1:exon

XP_033928397.1
type: Protein
SIO_000068: ncbiprotein

position:403196:1
position: 403196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410384:1
position: 410384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403196-403436:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404816-404891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405059-405106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405969-406126:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:407944-408045:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:409050-409216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:410301-410384:1:exon

LOC117437876
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 411673..437264
location: region:411673-437264:1
so has part: feature:411673-437264:1:exon
subclass of: SO_0000010

117437876
type: Gene
SIO_000068: ncbigene

position:411673:1
position: 411673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437264:1
position: 437264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411673-437264:1:exon

LOC117437876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437876
product: protein arginine methyltransferase 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072523.1
SIO_010081: LOC117437876
subclass of: SO_0000673
so part of: LOC117437876
location: join(411673..412019,413464..413582,415030..415115,417714..417848,419959..420059,420581..420630,422128..422291,425721..425882,427943..428020,428109..428167,430172..430294,432979..433154,434010..434119,435202..435295,435377..435493,436407..436471,437081..437264)
location: region:411673-437264:1
so has part: feature:411673-412019:1:exon
so has part: feature:413464-413582:1:exon
so has part: feature:415030-415115:1:exon
so has part: feature:417714-417848:1:exon
so has part: feature:419959-420059:1:exon
so has part: feature:420581-420630:1:exon
so has part: feature:422128-422291:1:exon
so has part: feature:425721-425882:1:exon
so has part: feature:427943-428020:1:exon
so has part: feature:428109-428167:1:exon
so has part: feature:430172-430294:1:exon
so has part: feature:432979-433154:1:exon
so has part: feature:434010-434119:1:exon
so has part: feature:435202-435295:1:exon
so has part: feature:435377-435493:1:exon
so has part: feature:436407-436471:1:exon
so has part: feature:437081-437264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411673-412019:1:exon

position:412019:1
position: 412019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413464-413582:1:exon

position:413464:1
position: 413464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413582:1
position: 413582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:415030-415115:1:exon

position:415030:1
position: 415030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415115:1
position: 415115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:417714-417848:1:exon

position:417714:1
position: 417714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417848:1
position: 417848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:419959-420059:1:exon

position:419959:1
position: 419959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420059:1
position: 420059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:420581-420630:1:exon

position:420581:1
position: 420581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420630:1
position: 420630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:422128-422291:1:exon

position:422128:1
position: 422128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422291:1
position: 422291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:425721-425882:1:exon

position:425721:1
position: 425721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425882:1
position: 425882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428020:1:exon

position:427943:1
position: 427943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428020:1
position: 428020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:428109-428167:1:exon

position:428109:1
position: 428109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428167:1
position: 428167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:430172-430294:1:exon

position:430172:1
position: 430172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430294:1
position: 430294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:432979-433154:1:exon

position:432979:1
position: 432979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433154:1
position: 433154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:434010-434119:1:exon

position:434010:1
position: 434010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434119:1
position: 434119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:435202-435295:1:exon

position:435202:1
position: 435202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435295:1
position: 435295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:435377-435493:1:exon

position:435377:1
position: 435377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435493:1
position: 435493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:436407-436471:1:exon

position:436407:1
position: 436407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436471:1
position: 436471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:437081-437264:1:exon

position:437081:1
position: 437081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 5
translation: MAAARVSAGRDLSCVPEVAAALAAVARQGFDFLCLPLFHPRHRREFQREPARSRAGPHTRSDLLLSGRDWNTLIVGKLSPWIRPDSPLEHVRRNSEEALRQELGFSAYLGLPAVLVPLRQRHSPNLARMLCTHLQAAHHSAMVWVQVPLMAPEDEREDLVGNEELERGGDETTWGWWNDFRTLCDYNKRVGVALEVGPDLPSSAAIDRWLGEPLKAALLPTSLFLTNKRGFPVLSRAHQRLLARLLKLEVQVVLTGAPRHGGKPLGSYLQYMEHVGQHRPPPSAYELFARGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYRCLLDRVPEEEKDTNVQVVMVLGAGRGPLVSAALRASRQAARAIRVYAVEKNPNAVVTLQSWQYEEWGAQVTVVAEDMRGWTPPEPADLVVSELLGSFGDNELSPECLDGAQHCLKAGGVSIPCSYTSFLAPISSSKLYTEVRGCRERDRDPEAQFEMPYVVRLHNYHQLASPQPCFTFQHPNPEPTNDNSRFRVMTFGIGADSVLHGFAGYFETTLYGELGLSIRPETHSPGMFSWFPIFFPLKQPLPLKAGEDLTVAFWRCCTPKKVWYEWAVTAPVPSALHNPSGRSYTIGL
SIO_010081: LOC117437876
subclass of: SO_0000673
so part of: LOC117437876
location: join(411934..412019,413464..413582,415030..415115,417714..417848,419959..420059,420581..420630,422128..422291,425721..425882,427943..428020,428109..428167,430172..430294,432979..433154,434010..434119,435202..435295,435377..435493,436407..436471,437081..437233)
location: region:411934-437233:1
so has part: feature:411934-412019:1:exon
so has part: feature:413464-413582:1:exon
so has part: feature:415030-415115:1:exon
so has part: feature:417714-417848:1:exon
so has part: feature:419959-420059:1:exon
so has part: feature:420581-420630:1:exon
so has part: feature:422128-422291:1:exon
so has part: feature:425721-425882:1:exon
so has part: feature:427943-428020:1:exon
so has part: feature:428109-428167:1:exon
so has part: feature:430172-430294:1:exon
so has part: feature:432979-433154:1:exon
so has part: feature:434010-434119:1:exon
so has part: feature:435202-435295:1:exon
so has part: feature:435377-435493:1:exon
so has part: feature:436407-436471:1:exon
so has part: feature:437081-437233:1:exon

XP_033928414.1
type: Protein
SIO_000068: ncbiprotein

position:411934:1
position: 411934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437233:1
position: 437233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411934-412019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413464-413582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415030-415115:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417714-417848:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419959-420059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420581-420630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422128-422291:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425721-425882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:427943-428020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428109-428167:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430172-430294:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:432979-433154:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:434010-434119:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:435202-435295:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:435377-435493:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:436407-436471:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:437081-437233:1:exon

LOC117437885
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 437604..451823
location: region:437604-451823:1
so has part: feature:437604-451823:1:exon
subclass of: SO_0000010

117437885
type: Gene
SIO_000068: ncbigene

position:437604:1
position: 437604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451823:1
position: 451823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437604-451823:1:exon

LOC117437885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437885
product: RNA binding motif protein 23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072535.1
SIO_010081: LOC117437885
subclass of: SO_0000673
so part of: LOC117437885
location: join(437604..437851,438116..438194,438286..438360,439210..439251,439361..439410,439888..439944,440661..440789,442160..442213,443875..443992,446201..446353,447193..447330,449016..449081,449856..450042,450825..450917,451735..451823)
location: region:437604-451823:1
so has part: feature:437604-437851:1:exon
so has part: feature:438116-438194:1:exon
so has part: feature:438286-438360:1:exon
so has part: feature:439210-439251:1:exon
so has part: feature:439361-439410:1:exon
so has part: feature:439888-439944:1:exon
so has part: feature:440661-440789:1:exon
so has part: feature:442160-442213:1:exon
so has part: feature:443875-443992:1:exon
so has part: feature:446201-446353:1:exon
so has part: feature:447193-447330:1:exon
so has part: feature:449016-449081:1:exon
so has part: feature:449856-450042:1:exon
so has part: feature:450825-450917:1:exon
so has part: feature:451735-451823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:437604-437851:1:exon

position:437851:1
position: 437851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:438116-438194:1:exon

position:438116:1
position: 438116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438194:1
position: 438194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:438286-438360:1:exon

position:438286:1
position: 438286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438360:1
position: 438360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:439210-439251:1:exon

position:439210:1
position: 439210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439251:1
position: 439251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:439361-439410:1:exon

position:439361:1
position: 439361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439410:1
position: 439410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:439888-439944:1:exon

position:439888:1
position: 439888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439944:1
position: 439944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:440661-440789:1:exon

position:440661:1
position: 440661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440789:1
position: 440789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:442160-442213:1:exon

position:442160:1
position: 442160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442213:1
position: 442213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:443875-443992:1:exon

position:443875:1
position: 443875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443992:1
position: 443992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:446201-446353:1:exon

position:446201:1
position: 446201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446353:1
position: 446353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:447193-447330:1:exon

position:447193:1
position: 447193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447330:1
position: 447330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:449016-449081:1:exon

position:449016:1
position: 449016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449081:1
position: 449081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:449856-450042:1:exon

position:449856:1
position: 449856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450042:1
position: 450042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:450825-450917:1:exon

position:450825:1
position: 450825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450917:1
position: 450917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:451735-451823:1:exon

position:451735:1
position: 451735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable RNA-binding protein 23
translation: MEAAGSDPTDAMTSDDFDIVIEAMLEAPYKKEEAQPGPSKAEPPAAQQAPEESSKEAKKETGSSSSRKKRSRSRSRSREHRHSRSRDRDRRRRSRSRERRSRHRSRERRRGSRSRSRERRREERARRRFGHSKSPLYREKSPVREAVGSLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAALASSLQKGSGGPMRLFVGSLHCNITKEMLRGIFEPFGKIESIVLMRDPDTGQSKGYGFITFSEAECARRALEQLNGFELAGRPMRVGQLHEGPDLGGAPEATEDPELMGPSARLQLMAKLAEGSGLQLPSSAQAALQLNGALPLGALNPAALTALSPALNLASQTLASQCLTLSGLFSPQTM
SIO_010081: LOC117437885
subclass of: SO_0000673
so part of: LOC117437885
location: join(438171..438194,438286..438360,439210..439251,439361..439410,439888..439944,440661..440789,442160..442213,443875..443992,446201..446353,447193..447330,449016..449081,449856..450042,450825..450917,451735..451823)
location: region:438171-451823:1
so has part: feature:438171-438194:1:exon
so has part: feature:438286-438360:1:exon
so has part: feature:439210-439251:1:exon
so has part: feature:439361-439410:1:exon
so has part: feature:439888-439944:1:exon
so has part: feature:440661-440789:1:exon
so has part: feature:442160-442213:1:exon
so has part: feature:443875-443992:1:exon
so has part: feature:446201-446353:1:exon
so has part: feature:447193-447330:1:exon
so has part: feature:449016-449081:1:exon
so has part: feature:449856-450042:1:exon
so has part: feature:450825-450917:1:exon
so has part: feature:451735-451823:1:exon

XP_033928426.1
type: Protein
SIO_000068: ncbiprotein

position:438171:1
position: 438171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438171-438194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:438286-438360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439210-439251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439361-439410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439888-439944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440661-440789:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:442160-442213:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:443875-443992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446201-446353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447193-447330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449016-449081:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449856-450042:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450825-450917:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:451735-451823:1:exon

LOC117437887
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 460873..478248
location: region:460873-478248:1
so has part: feature:460873-478248:1:exon
subclass of: SO_0000010

117437887
type: Gene
SIO_000068: ncbigene

position:460873:1
position: 460873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478248:1
position: 478248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460873-478248:1:exon

LOC117437887
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437887
product: matrix metallopeptidase 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034072536.1
SIO_010081: LOC117437887
subclass of: SO_0000673
so part of: LOC117437887
location: join(460873..460968,465770..465918,467776..467898,468603..468910,470360..470521,471731..471879,473554..473692,475109..475259,476790..476905,477767..478248)
location: region:460873-478248:1
so has part: feature:460873-460968:1:exon
so has part: feature:465770-465918:1:exon
so has part: feature:467776-467898:1:exon
so has part: feature:468603-468910:1:exon
so has part: feature:470360-470521:1:exon
so has part: feature:471731-471879:1:exon
so has part: feature:473554-473692:1:exon
so has part: feature:475109-475259:1:exon
so has part: feature:476790-476905:1:exon
so has part: feature:477767-478248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460873-460968:1:exon

position:460968:1
position: 460968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465770-465918:1:exon

position:465770:1
position: 465770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465918:1
position: 465918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:467776-467898:1:exon

position:467776:1
position: 467776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467898:1
position: 467898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:468603-468910:1:exon

position:468603:1
position: 468603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468910:1
position: 468910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:470360-470521:1:exon

position:470360:1
position: 470360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470521:1
position: 470521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:471731-471879:1:exon

position:471731:1
position: 471731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471879:1
position: 471879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:473554-473692:1:exon

position:473554:1
position: 473554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473692:1
position: 473692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:475109-475259:1:exon

position:475109:1
position: 475109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475259:1
position: 475259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:476790-476905:1:exon

position:476790:1
position: 476790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476905:1
position: 476905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:477767-478248:1:exon

position:477767:1
position: 477767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437887
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrix metalloproteinase-14
translation: MELLLLLLLAMGVLPPPAAPQQRFSPEAWLQQYGYLPPGDLRAQAQRSPHSLAAAFAAMQRLYGLKVTARADPDTIRAMRRPRCGVPDKFGPELKANVRRRRFAIQGMRWEQQEITYSIQNYTPKIGERGTLTSIRRAFSAWAAAAPLRFREVPYGAIRAGLAPLADIMVLFAEGFHGDSTPFDGQGGFLAHAYFPGPHIGGDTHFDGAEPWTDRNEELSGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTEGFTLPEDDRRGIQQLYGTGPGPSWPPVVPRSTEKPHRPPGPPYGPDICDGNFDTIAMLRGEMFVFKERWFWRVRDRRVLDGYPLPIGHFWAGLPPSISAAYERRDGKFVFFKGDRHWVFNEAALEPGYPRALRDMGQGVPSDRLDAALQWLPSGTTYLFRGNKYYRFNEDTRSVDPDYPKSIEVWGGVPEAPSGAFMGPDDAVTYFYKAGRYWLFDNRLLRVPPGYPKSALRDWLGCDRPDQSEPSPPGGGGDNDVIVIEVGPAPSALATPLALLGGAAAILLAAVLLCRRRGAPKRLLRCQRSLLPRV
SIO_010081: LOC117437887
subclass of: SO_0000673
so part of: LOC117437887
location: join(460888..460968,465770..465918,467776..467898,468603..468910,470360..470521,471731..471879,473554..473692,475109..475259,476790..476905,477767..478092)
location: region:460888-478092:1
so has part: feature:460888-460968:1:exon
so has part: feature:465770-465918:1:exon
so has part: feature:467776-467898:1:exon
so has part: feature:468603-468910:1:exon
so has part: feature:470360-470521:1:exon
so has part: feature:471731-471879:1:exon
so has part: feature:473554-473692:1:exon
so has part: feature:475109-475259:1:exon
so has part: feature:476790-476905:1:exon
so has part: feature:477767-478092:1:exon

XP_033928427.1
type: Protein
SIO_000068: ncbiprotein

position:460888:1
position: 460888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478092:1
position: 478092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460888-460968:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465770-465918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467776-467898:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:468603-468910:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470360-470521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471731-471879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473554-473692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475109-475259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:476790-476905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:477767-478092:1:exon

LOC117437879
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(480267..482201)
location: region:480267-482201:-1
so has part: feature:480267-482201:-1:exon
subclass of: SO_0000010

117437879
type: Gene
SIO_000068: ncbigene

position:480267:-1
position: 480267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482201:-1
position: 482201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480267-482201:-1:exon

LOC117437879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437879
product: mitochondrial ribosomal protein L52
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072529.1
SIO_010081: LOC117437879
subclass of: SO_0000673
so part of: LOC117437879
location: complement(join(480267..480442,480712..480776,481719..481786,481861..481930,482149..482201))
location: region:480267-482201:-1
so has part: feature:482149-482201:-1:exon
so has part: feature:481861-481930:-1:exon
so has part: feature:481719-481786:-1:exon
so has part: feature:480712-480776:-1:exon
so has part: feature:480267-480442:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482149-482201:-1:exon

position:482149:-1
position: 482149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:481861-481930:-1:exon

position:481861:-1
position: 481861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481930:-1
position: 481930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:481719-481786:-1:exon

position:481719:-1
position: 481719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481786:-1
position: 481786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:480712-480776:-1:exon

position:480712:-1
position: 480712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480776:-1
position: 480776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480267-480442:-1:exon

position:480442:-1
position: 480442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L52, mitochondrial
translation: MAARRIMRLAERQARGLRPLPPRPQRIGEWRVTQGWAPSTAGYGPLRDLPDWSFVDGRPAPLWKGQQRRLQENEALARRAVKLSQALDGAIQRGGGSKEGSGPPPLKPKGAQRKPV
SIO_010081: LOC117437879
subclass of: SO_0000673
so part of: LOC117437879
location: complement(join(480323..480442,480712..480776,481719..481786,481861..481930,482149..482176))
location: region:480323-482176:-1
so has part: feature:482149-482176:-1:exon
so has part: feature:481861-481930:-1:exon
so has part: feature:481719-481786:-1:exon
so has part: feature:480712-480776:-1:exon
so has part: feature:480323-480442:-1:exon

XP_033928420.1
type: Protein
SIO_000068: ncbiprotein

position:480323:-1
position: 480323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482176:-1
position: 482176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482149-482176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481861-481930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481719-481786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480712-480776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480323-480442:-1:exon

LOC117437863
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(482543..489768)
location: region:482543-489768:-1
so has part: feature:482543-489768:-1:exon
subclass of: SO_0000010

117437863
type: Gene
SIO_000068: ncbigene

position:482543:-1
position: 482543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489768:-1
position: 489768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482543-489768:-1:exon

LOC117437863
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437863
product: OXA1L mitochondrial inner membrane protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072507.1
SIO_010081: LOC117437863
subclass of: SO_0000673
so part of: LOC117437863
location: complement(join(482543..482575,482838..482938,483159..483239,483574..483745,485074..485178,486029..486193,487007..487092,487692..487835,488599..488944,489455..489538,489655..489768))
location: region:482543-489768:-1
so has part: feature:489655-489768:-1:exon
so has part: feature:489455-489538:-1:exon
so has part: feature:488599-488944:-1:exon
so has part: feature:487692-487835:-1:exon
so has part: feature:487007-487092:-1:exon
so has part: feature:486029-486193:-1:exon
so has part: feature:485074-485178:-1:exon
so has part: feature:483574-483745:-1:exon
so has part: feature:483159-483239:-1:exon
so has part: feature:482838-482938:-1:exon
so has part: feature:482543-482575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489655-489768:-1:exon

position:489655:-1
position: 489655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:489455-489538:-1:exon

position:489455:-1
position: 489455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489538:-1
position: 489538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:488599-488944:-1:exon

position:488599:-1
position: 488599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488944:-1
position: 488944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:487692-487835:-1:exon

position:487692:-1
position: 487692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487835:-1
position: 487835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:487007-487092:-1:exon

position:487007:-1
position: 487007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487092:-1
position: 487092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:486029-486193:-1:exon

position:486029:-1
position: 486029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486193:-1
position: 486193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:485074-485178:-1:exon

position:485074:-1
position: 485074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485178:-1
position: 485178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:483574-483745:-1:exon

position:483574:-1
position: 483574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483745:-1
position: 483745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:483159-483239:-1:exon

position:483159:-1
position: 483159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483239:-1
position: 483239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:482838-482938:-1:exon

position:482838:-1
position: 482838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482938:-1
position: 482938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:482543-482575:-1:exon

position:482575:-1
position: 482575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437863
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial inner membrane protein OXA1L
translation: MTHAPLEGGAVSVVTSQATPHSPQGAKMAAMLRVVRLQALRGPPWPWRPPVGPAAARRGLAGGGAEPGLTAPIAPMGPSPPLMGQTPPAPPPSPPLVGQDPSLIAPSPSLLPPSPPAAMGQDPLSMGQSMGLAPHAMGPGAPEVRLEELGLGACTPVGLVQNFLQFLHLDVGLPWWGAIAAGTLCVRVALLPLLLRAQREAAVLALHTPRLQQLSKGLAQARRGSDQREVARAYTELVGYQQRHNLNPLRGFLVPLVQTPVFVSFFLALQGMAAAPVPGLQWGGLGWFQDLSAPDPYYLLPVLVTASMGLVLELGAETGVSSPGGGAMRQLLRLLPLICLPFILHFPTAIFTYWLTSNSFSLLHVALLRVPALRARLGLPPPVKGGGVTPGGGGEKKGLIARMKQEWREAQALQQGEQRQWRQRHHLDMAAKGPLRQTFASNPLAPPTPPPPPPLASQAAMEGDIGWFMDGKMAAP
SIO_010081: LOC117437863
subclass of: SO_0000673
so part of: LOC117437863
location: complement(join(482543..482575,482838..482938,483159..483239,483574..483745,485074..485178,486029..486193,487007..487092,487692..487835,488599..488944,489455..489538,489655..489768))
location: region:482543-489768:-1
so has part: feature:489655-489768:-1:exon
so has part: feature:489455-489538:-1:exon
so has part: feature:488599-488944:-1:exon
so has part: feature:487692-487835:-1:exon
so has part: feature:487007-487092:-1:exon
so has part: feature:486029-486193:-1:exon
so has part: feature:485074-485178:-1:exon
so has part: feature:483574-483745:-1:exon
so has part: feature:483159-483239:-1:exon
so has part: feature:482838-482938:-1:exon
so has part: feature:482543-482575:-1:exon

XP_033928398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489655-489768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489455-489538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488599-488944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:487692-487835:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487007-487092:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486029-486193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485074-485178:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:483574-483745:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:483159-483239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482838-482938:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:482543-482575:-1:exon

LOC117437864
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 489805..508865
location: region:489805-508865:1
so has part: feature:489805-508865:1:exon
subclass of: SO_0000010

117437864
type: Gene
SIO_000068: ncbigene

position:489805:1
position: 489805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508865:1
position: 508865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489805-508865:1:exon

LOC117437864
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437864
product: ring finger protein 31
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072508.1
SIO_010081: LOC117437864
subclass of: SO_0000673
so part of: LOC117437864
location: join(489805..489878,490474..491254,491486..491619,493517..493679,494937..495092,495674..495727,495885..495943,496787..496949,498365..498630,499412..499628,500430..500612,501697..501903,503318..503491,504631..504729,505081..505170,505917..506037,506822..506940,507658..507771,507992..508049,508416..508512,508629..508865)
location: region:489805-508865:1
so has part: feature:489805-489878:1:exon
so has part: feature:490474-491254:1:exon
so has part: feature:491486-491619:1:exon
so has part: feature:493517-493679:1:exon
so has part: feature:494937-495092:1:exon
so has part: feature:495674-495727:1:exon
so has part: feature:495885-495943:1:exon
so has part: feature:496787-496949:1:exon
so has part: feature:498365-498630:1:exon
so has part: feature:499412-499628:1:exon
so has part: feature:500430-500612:1:exon
so has part: feature:501697-501903:1:exon
so has part: feature:503318-503491:1:exon
so has part: feature:504631-504729:1:exon
so has part: feature:505081-505170:1:exon
so has part: feature:505917-506037:1:exon
so has part: feature:506822-506940:1:exon
so has part: feature:507658-507771:1:exon
so has part: feature:507992-508049:1:exon
so has part: feature:508416-508512:1:exon
so has part: feature:508629-508865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489805-489878:1:exon

position:489878:1
position: 489878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:490474-491254:1:exon

position:490474:1
position: 490474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491254:1
position: 491254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:491486-491619:1:exon

position:491486:1
position: 491486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491619:1
position: 491619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:493517-493679:1:exon

position:493517:1
position: 493517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493679:1
position: 493679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:494937-495092:1:exon

position:494937:1
position: 494937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495092:1
position: 495092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:495674-495727:1:exon

position:495674:1
position: 495674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495727:1
position: 495727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:495885-495943:1:exon

position:495885:1
position: 495885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495943:1
position: 495943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:496787-496949:1:exon

position:496787:1
position: 496787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496949:1
position: 496949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498365-498630:1:exon

position:498365:1
position: 498365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498630:1
position: 498630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:499412-499628:1:exon

position:499412:1
position: 499412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499628:1
position: 499628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:500430-500612:1:exon

position:500430:1
position: 500430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500612:1
position: 500612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:501697-501903:1:exon

position:501697:1
position: 501697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501903:1
position: 501903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:503318-503491:1:exon

position:503318:1
position: 503318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503491:1
position: 503491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:504631-504729:1:exon

position:504631:1
position: 504631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504729:1
position: 504729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:505081-505170:1:exon

position:505081:1
position: 505081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505170:1
position: 505170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:505917-506037:1:exon

position:505917:1
position: 505917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506037:1
position: 506037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:506822-506940:1:exon

position:506822:1
position: 506822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506940:1
position: 506940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:507658-507771:1:exon

position:507658:1
position: 507658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507771:1
position: 507771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:507992-508049:1:exon

position:507992:1
position: 507992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508049:1
position: 508049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:508416-508512:1:exon

position:508416:1
position: 508416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508512:1
position: 508512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:508629-508865:1:exon

position:508629:1
position: 508629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437864
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF31
translation: MEEQGQPQSVEETPESPTGASIGDPIEGNGNPIKPNGDPIKGNGNPIEGNGDPIKPNENPIKPNGDPIEGNGEPIKPNESPIKPNGDPSKGNGNPINDTGTPIKPNETPIEGNGNPIEPYRDPIKGSGNPIEPYGDPIKGNGNPIKGNGEPIKPNETPIKGNGNPIKDNGTPIKPYGDPIKGNGDHIEGSVAPKGNGDPIKPNGHPIKPNDTPIKPNGDPIKPNETPIEAHRAPIKPNGDPIKPYGDPIKPNDTPIKPHLEAALLQAPGLPLPPELTPLLALPLPPPHKCVLLDGAGLLRSNLSPLGGAPPLGLPVVHRALTLLERYGRNLLQAPPPRHWRRVSRGNPAYRGALRHVTGAREVLMLLGYTSEEGEGLSFPPWVPAPHGPRVATVTADVLLLRRELELLMENQHPNPHFFTDILKGGEEEDLVTDAMPIVEHDGPIGMGSAPPPAMGQPHSAMGQEEEGGGWACASCTFLNGSPSVLCGVCERPRLARRPPPQGWPCPHCTYFNHGPGPTCSLCHLHRSHPVSPAPEHHVTAPDPHVTPSEPRPPAEPRPPPKATPPLDADQWRQRRLEQDGRRVVALLRVRPLSSMAPPPLSPPPAPPHTLWVLAGAVGLYGAQEPGGPLGALSLPEALWGWGRAMGQAGGALRACMGRRRKQLKALSSMGFPDQLQSGRALFQAGGSISGALALLQAPLMGPFLQRLWDPHVPPMDWGCADQAPLIRRALAELPLPSWGRAQLLVGLGRELGYGAALGALLEAVGSCGDPEQLRRRLRCECAVCGAAVAREQAQVLPACQCWLCPECFRLHFRVGVRERRVRDLVCPSCARPDLRDPAAAAGYFCLLDAQLRQCLDPATYELFTQKLTELELERDPQFLWCPQCSFGFIFEAEQGPAQCPQCKHSCCPRCQRPWLPAHTSLSCAAFEAWLGSSNHQGAPEAPSLEAFLQEHSIGCPRCGARFALARGGCLHLQCSQCQHQFCSGCACPFHPRDSCPIDGCPLRGSLHGHHPRDCIFHLRDWSPTRLQRLLQDASIPFETELPAGFSPPPGGGCPVLEQKETPMGLKDEPCGRDTPLAHGGLCRGHYTEYLVHVINHHRLDPLPLYDSTELRACAERHLPGGRSQRRAGEGGVAYERRLRLLLQREAPLRGGATPPQDT
SIO_010081: LOC117437864
subclass of: SO_0000673
so part of: LOC117437864
location: join(490478..491254,491486..491619,493517..493679,494937..495092,495674..495727,495885..495943,496787..496949,498365..498630,499412..499628,500430..500612,501697..501903,503318..503491,504631..504729,505081..505170,505917..506037,506822..506940,507658..507771,507992..508049,508416..508512,508629..508857)
location: region:490478-508857:1
so has part: feature:490478-491254:1:exon
so has part: feature:491486-491619:1:exon
so has part: feature:493517-493679:1:exon
so has part: feature:494937-495092:1:exon
so has part: feature:495674-495727:1:exon
so has part: feature:495885-495943:1:exon
so has part: feature:496787-496949:1:exon
so has part: feature:498365-498630:1:exon
so has part: feature:499412-499628:1:exon
so has part: feature:500430-500612:1:exon
so has part: feature:501697-501903:1:exon
so has part: feature:503318-503491:1:exon
so has part: feature:504631-504729:1:exon
so has part: feature:505081-505170:1:exon
so has part: feature:505917-506037:1:exon
so has part: feature:506822-506940:1:exon
so has part: feature:507658-507771:1:exon
so has part: feature:507992-508049:1:exon
so has part: feature:508416-508512:1:exon
so has part: feature:508629-508857:1:exon

XP_033928399.1
type: Protein
SIO_000068: ncbiprotein

position:490478:1
position: 490478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508857:1
position: 508857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490478-491254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491486-491619:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493517-493679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494937-495092:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:495674-495727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495885-495943:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:496787-496949:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498365-498630:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:499412-499628:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:500430-500612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:501697-501903:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:503318-503491:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:504631-504729:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505081-505170:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505917-506037:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506822-506940:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:507658-507771:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:507992-508049:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:508416-508512:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:508629-508857:1:exon

LOC117437865
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 509332..513540
location: region:509332-513540:1
so has part: feature:509332-513540:1:exon
subclass of: SO_0000010

117437865
type: Gene
SIO_000068: ncbigene

position:509332:1
position: 509332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513540:1
position: 513540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509332-513540:1:exon

LOC117437865
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437865
product: interferon regulatory factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072509.1
SIO_010081: LOC117437865
subclass of: SO_0000673
so part of: LOC117437865
location: join(509332..509672,510975..511167,512614..512829,513376..513444,513533..513540)
location: region:509332-513540:1
so has part: feature:509332-509672:1:exon
so has part: feature:510975-511167:1:exon
so has part: feature:512614-512829:1:exon
so has part: feature:513376-513444:1:exon
so has part: feature:513533-513540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509332-509672:1:exon

position:509672:1
position: 509672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510975-511167:1:exon

position:510975:1
position: 510975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511167:1
position: 511167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:512614-512829:1:exon

position:512614:1
position: 512614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512829:1
position: 512829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:513376-513444:1:exon

position:513376:1
position: 513376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513444:1
position: 513444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:513533-513540:1:exon

position:513533:1
position: 513533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon regulatory factor 9
translation: MTEATPPRGKKRLRDWLLAQLRSGRYAGLVWDDPERTALRIPWQRGGKGGAGSALCKAWAEFKGRLPPGAPPDPAAWKSRLRCALHKSPEFQELPHRSQPHGHSPYRVYRLLPPRPEPQSTGARRPRPPAPDPPPLIGPSGSPAQEEEEEGAGPEDRGVASVGGASPCPAPSEAPPPPYTLTLSSPHPLPPAEGPCCLLISLLVSGSICSSLLLPPAL
SIO_010081: LOC117437865
subclass of: SO_0000673
so part of: LOC117437865
location: join(509502..509672,510975..511167,512614..512829,513376..513444,513533..513540)
location: region:509502-513540:1
so has part: feature:509502-509672:1:exon
so has part: feature:510975-511167:1:exon
so has part: feature:512614-512829:1:exon
so has part: feature:513376-513444:1:exon
so has part: feature:513533-513540:1:exon

XP_033928400.1
type: Protein
SIO_000068: ncbiprotein

position:509502:1
position: 509502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509502-509672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510975-511167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512614-512829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513376-513444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:513533-513540:1:exon

LOC117437884
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 513793..517043
location: region:513793-517043:1
so has part: feature:513793-517043:1:exon
subclass of: SO_0000010

117437884
type: Gene
SIO_000068: ncbigene

position:513793:1
position: 513793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517043:1
position: 517043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513793-517043:1:exon

LOC117437884
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437884
product: uncharacterized LOC117437884
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072534.1
SIO_010081: LOC117437884
subclass of: SO_0000673
so part of: LOC117437884
location: join(513793..513972,514902..514978,515513..516356,516444..517043)
location: region:513793-517043:1
so has part: feature:513793-513972:1:exon
so has part: feature:514902-514978:1:exon
so has part: feature:515513-516356:1:exon
so has part: feature:516444-517043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513793-513972:1:exon

position:513972:1
position: 513972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:514902-514978:1:exon

position:514902:1
position: 514902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514978:1
position: 514978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:515513-516356:1:exon

position:515513:1
position: 515513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516356:1
position: 516356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:516444-517043:1:exon

position:516444:1
position: 516444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437884
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117437884
translation: MTSLPPTMPFGRSSLPPGAHREYEAAMAALGAEPEPEVVTSSPPPPELIRDPHFRLQAEAAVTPGFMAAILGPGSMGQLAAMLDGEREDKMAAGSEGATASKMAAPMAELTADKMAAPREKGEQAEVRVTWCTLCPKMAATVKRQGHKMAAPIVRPVSKMATPMERPVFKMAAPIDPPPFKMAAPMIDPTPNMAQPTASGDTIKMAAMALTLTQHGGPHGDTQDGGSH
SIO_010081: LOC117437884
subclass of: SO_0000673
so part of: LOC117437884
location: join(516186..516356,516444..516959)
location: region:516186-516959:1
so has part: feature:516186-516356:1:exon
so has part: feature:516444-516959:1:exon

XP_033928425.1
type: Protein
SIO_000068: ncbiprotein

position:516186:1
position: 516186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516959:1
position: 516959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516186-516356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516444-516959:1:exon

LOC115946206
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115946206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516880..526319)
location: region:516880-526319:-1
so has part: feature:516880-526319:-1:exon
subclass of: SO_0000010

115946206
type: Gene
SIO_000068: ncbigene

position:516880:-1
position: 516880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526319:-1
position: 526319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516880-526319:-1:exon

LOC115946206
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115946206
product: tetratricopeptide repeat domain 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072510.1
SIO_010081: LOC115946206
subclass of: SO_0000673
so part of: LOC115946206
location: complement(join(516880..517372,517894..518038,518148..518251,518291..518332,518854..519000,519600..519656,520184..520275,520940..521096,522194..522405,522495..522618,523813..524075,524711..524762,524856..524913,526237..526319))
location: region:516880-526319:-1
so has part: feature:526237-526319:-1:exon
so has part: feature:524856-524913:-1:exon
so has part: feature:524711-524762:-1:exon
so has part: feature:523813-524075:-1:exon
so has part: feature:522495-522618:-1:exon
so has part: feature:522194-522405:-1:exon
so has part: feature:520940-521096:-1:exon
so has part: feature:520184-520275:-1:exon
so has part: feature:519600-519656:-1:exon
so has part: feature:518854-519000:-1:exon
so has part: feature:518291-518332:-1:exon
so has part: feature:518148-518251:-1:exon
so has part: feature:517894-518038:-1:exon
so has part: feature:516880-517372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526237-526319:-1:exon

position:526237:-1
position: 526237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:524856-524913:-1:exon

position:524856:-1
position: 524856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524913:-1
position: 524913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:524711-524762:-1:exon

position:524711:-1
position: 524711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524762:-1
position: 524762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:523813-524075:-1:exon

position:523813:-1
position: 523813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524075:-1
position: 524075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:522495-522618:-1:exon

position:522495:-1
position: 522495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522618:-1
position: 522618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:522194-522405:-1:exon

position:522194:-1
position: 522194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522405:-1
position: 522405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:520940-521096:-1:exon

position:520940:-1
position: 520940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521096:-1
position: 521096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:520184-520275:-1:exon

position:520184:-1
position: 520184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520275:-1
position: 520275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:519600-519656:-1:exon

position:519600:-1
position: 519600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519656:-1
position: 519656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:518854-519000:-1:exon

position:518854:-1
position: 518854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519000:-1
position: 519000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:518291-518332:-1:exon

position:518291:-1
position: 518291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518332:-1
position: 518332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:518148-518251:-1:exon

position:518148:-1
position: 518148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518251:-1
position: 518251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:517894-518038:-1:exon

position:517894:-1
position: 517894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518038:-1
position: 518038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:516880-517372:-1:exon

position:517372:-1
position: 517372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115946206
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115946206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5
translation: MRQSAQPGAMAAAGPEAAAGGAEEEGDGDEEGLKRLEELVSDLQRFRLSLPSDPPNDPPTVTLEQELERTLRLMDDVHVSQQARGRALELRAEALGVCPTAAPQVEQALSRAVKLDPGLASAWIRLGELQWGRGDLEGARACFRGALAHPRPHDVTPAAEARARRLLSVVLRAGGGGGALRESLTQAEAAVRCQPCDGASWYVLGNAYVSLFFAGGQSPEAARRALGAYAQAERVDPEAANNPDLHLNRATLLQYEERYGAALEGLSRAASLAPGWAEPRRRHAHLLDFLSRLCAALANRPPSRSKRRRSRPDPLSPAPLSELRPGPNPRRALIGRVLFTCSPEGRVPYVLGLADGAGGVAAVTVYNAAPDWTVAVGDSVTVPRPCLKQHQHQHQGQTFSFLGLRVPSPLSLLINGRPPPSSSVAPARLLLRAEPEQATPPEP
SIO_010081: LOC115946206
subclass of: SO_0000673
so part of: LOC115946206
location: complement(join(517232..517372,517894..518038,518148..518251,518291..518332,518854..519000,519600..519656,520184..520275,520940..521096,522194..522405,522495..522618,523813..523923))
location: region:517232-523923:-1
so has part: feature:523813-523923:-1:exon
so has part: feature:522495-522618:-1:exon
so has part: feature:522194-522405:-1:exon
so has part: feature:520940-521096:-1:exon
so has part: feature:520184-520275:-1:exon
so has part: feature:519600-519656:-1:exon
so has part: feature:518854-519000:-1:exon
so has part: feature:518291-518332:-1:exon
so has part: feature:518148-518251:-1:exon
so has part: feature:517894-518038:-1:exon
so has part: feature:517232-517372:-1:exon

XP_033928401.1
type: Protein
SIO_000068: ncbiprotein

position:517232:-1
position: 517232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523923:-1
position: 523923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523813-523923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:522495-522618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:522194-522405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:520940-521096:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:520184-520275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519600-519656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518854-519000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:518291-518332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:518148-518251:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517894-518038:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:517232-517372:-1:exon

LOC117437873
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(526856..532566)
location: region:526856-532566:-1
so has part: feature:526856-532566:-1:exon
subclass of: SO_0000010

117437873
type: Gene
SIO_000068: ncbigene

position:526856:-1
position: 526856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532566:-1
position: 532566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526856-532566:-1:exon

LOC117437873
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437873
product: O-sialoglycoprotein endopeptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072518.1
SIO_010081: LOC117437873
subclass of: SO_0000673
so part of: LOC117437873
location: complement(join(526856..526939,527342..527440,527621..527696,528244..528334,529488..529553,529819..529897,530589..530638,531028..531123,531835..532010,532078..532197,532320..532566))
location: region:526856-532566:-1
so has part: feature:532320-532566:-1:exon
so has part: feature:532078-532197:-1:exon
so has part: feature:531835-532010:-1:exon
so has part: feature:531028-531123:-1:exon
so has part: feature:530589-530638:-1:exon
so has part: feature:529819-529897:-1:exon
so has part: feature:529488-529553:-1:exon
so has part: feature:528244-528334:-1:exon
so has part: feature:527621-527696:-1:exon
so has part: feature:527342-527440:-1:exon
so has part: feature:526856-526939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:532320-532566:-1:exon

position:532320:-1
position: 532320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:532078-532197:-1:exon

position:532078:-1
position: 532078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532197:-1
position: 532197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531835-532010:-1:exon

position:531835:-1
position: 531835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532010:-1
position: 532010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:531028-531123:-1:exon

position:531028:-1
position: 531028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531123:-1
position: 531123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:530589-530638:-1:exon

position:530589:-1
position: 530589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530638:-1
position: 530638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:529819-529897:-1:exon

position:529819:-1
position: 529819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529897:-1
position: 529897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:529488-529553:-1:exon

position:529488:-1
position: 529488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529553:-1
position: 529553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:528244-528334:-1:exon

position:528244:-1
position: 528244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528334:-1
position: 528334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:527621-527696:-1:exon

position:527621:-1
position: 527621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527696:-1
position: 527696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:527342-527440:-1:exon

position:527342:-1
position: 527342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527440:-1
position: 527440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:526856-526939:-1:exon

position:526939:-1
position: 526939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437873
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable tRNA N6-adenosine threonylcarbamoyltransferase
translation: MPTVLGLEGSANKVGAGVVRDGVILSSRRATYVTPPGQGFAPGPVGRHHQGALLGLVAAAMAEAGAGPRDLDGIAFTRGPGLGAPLAVVAAVGRTLAQLWGLPLLGVNHCVGHIEMGRLLAPARDPVVLYVSGGNTQVIAFSRRRYRIFGETLDLALGNCLDRLARMLRLPNDPSPGYNVEVMARRGRRLLELPYVVKGMDVSFSGLLSHLQAVTPKLLASGEATPEDLCFSLQETAFAMLAEVTERALALTRAPHLLLVGGVACNQRLQEMLRTMCSARGVTLCPTDERYCIDNGAMIAQAGWEMLRVGQVTELDQSGITQRYRTDEVEVTWRD
SIO_010081: LOC117437873
subclass of: SO_0000673
so part of: LOC117437873
location: complement(join(526900..526939,527342..527440,527621..527696,528244..528334,529488..529553,529819..529897,530589..530638,531028..531123,531835..532010,532078..532197,532320..532434))
location: region:526900-532434:-1
so has part: feature:532320-532434:-1:exon
so has part: feature:532078-532197:-1:exon
so has part: feature:531835-532010:-1:exon
so has part: feature:531028-531123:-1:exon
so has part: feature:530589-530638:-1:exon
so has part: feature:529819-529897:-1:exon
so has part: feature:529488-529553:-1:exon
so has part: feature:528244-528334:-1:exon
so has part: feature:527621-527696:-1:exon
so has part: feature:527342-527440:-1:exon
so has part: feature:526900-526939:-1:exon

XP_033928409.1
type: Protein
SIO_000068: ncbiprotein

position:526900:-1
position: 526900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532434:-1
position: 532434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532320-532434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:532078-532197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531835-532010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531028-531123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530589-530638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529819-529897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:529488-529553:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:528244-528334:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527621-527696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:527342-527440:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526900-526939:-1:exon

LOC117437866
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 534012..538113
location: region:534012-538113:1
so has part: feature:534012-538113:1:exon
subclass of: SO_0000010

117437866
type: Gene
SIO_000068: ncbigene

position:534012:1
position: 534012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538113:1
position: 538113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534012-538113:1:exon

LOC117437866
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437866
product: apurinic/apyrimidinic endodeoxyribonuclease 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072511.1
SIO_010081: LOC117437866
subclass of: SO_0000673
so part of: LOC117437866
location: join(534012..534018,534294..534448,535574..535766,537599..538113)
location: region:534012-538113:1
so has part: feature:534012-534018:1:exon
so has part: feature:534294-534448:1:exon
so has part: feature:535574-535766:1:exon
so has part: feature:537599-538113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534012-534018:1:exon

position:534018:1
position: 534018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534294-534448:1:exon

position:534294:1
position: 534294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534448:1
position: 534448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:535574-535766:1:exon

position:535574:1
position: 535574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535766:1
position: 535766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:537599-538113:1:exon

position:537599:1
position: 537599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437866
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-(apurinic or apyrimidinic site) lyase
translation: MDGAAAKRSRESAVPLPEETPVREVAPSGKRVGMRLVSWNVAGLRAWLRKGGLKWVQDAAPDVLCLQETKCGAESVPPEVRDLQALPHQYWASPEGKPGYSGVGLLCRCEPLRVTYGIDDPEHDPSARVLTAEFPSFFVVCAYVPNAGRGLTRLQPRLRFDAAFLSYLSRLDAIKPVALGGDLNVAHTELDLRHPSANRRSPGFTDEERRGMDAILAAGFLDAFRVMYPALPHAYTFWTYLGGARERNVGWRLDYFLISERLRPALCDCKIRPRVMGSDHCPVELYLAL
SIO_010081: LOC117437866
subclass of: SO_0000673
so part of: LOC117437866
location: join(534012..534018,534294..534448,535574..535766,537599..538113)
location: region:534012-538113:1
so has part: feature:534012-534018:1:exon
so has part: feature:534294-534448:1:exon
so has part: feature:535574-535766:1:exon
so has part: feature:537599-538113:1:exon

XP_033928402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534012-534018:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534294-534448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535574-535766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537599-538113:1:exon

LOC115946137
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115946137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(539539..543393)
location: region:539539-543393:-1
so has part: feature:539539-543393:-1:exon
subclass of: SO_0000010

115946137
type: Gene
SIO_000068: ncbigene

position:539539:-1
position: 539539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543393:-1
position: 543393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539539-543393:-1:exon

LOC115946137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115946137
product: phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072516.1
SIO_010081: LOC115946137
subclass of: SO_0000673
so part of: LOC115946137
location: complement(join(539539..540419,540969..541059,541145..541197,541968..542073,542721..542827,543029..543210,543326..543393))
location: region:539539-543393:-1
so has part: feature:543326-543393:-1:exon
so has part: feature:543029-543210:-1:exon
so has part: feature:542721-542827:-1:exon
so has part: feature:541968-542073:-1:exon
so has part: feature:541145-541197:-1:exon
so has part: feature:540969-541059:-1:exon
so has part: feature:539539-540419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543326-543393:-1:exon

position:543326:-1
position: 543326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543029-543210:-1:exon

position:543029:-1
position: 543029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543210:-1
position: 543210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:542721-542827:-1:exon

position:542721:-1
position: 542721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542827:-1
position: 542827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:541968-542073:-1:exon

position:541968:-1
position: 541968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542073:-1
position: 542073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:541145-541197:-1:exon

position:541145:-1
position: 541145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541197:-1
position: 541197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:540969-541059:-1:exon

position:540969:-1
position: 540969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541059:-1
position: 541059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539539-540419:-1:exon

position:540419:-1
position: 540419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115946137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115946137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase
translation: MADGERSPLLPVEPGPGGAPGEAPPPYSPLVSPEGGGAGGGSEGVGGAGPSVTCRVCQRPISVEGKGHQHVVKCGACGEATPIRTAPAGKKYVRCPCNCLLVCSGAAQRIACPRPYCKRIINLGPVQAGAASPEPPAGGVRVACGHCGGPFLWAELSDRALARCPHCRKVSAIGRRLPRRRCLCCLLLALLMAGAATGLAVLTWGVSRKLRPLHAGWALLGAGSGACLLRAAYWGCVRVSRALPARP
SIO_010081: LOC115946137
subclass of: SO_0000673
so part of: LOC115946137
location: complement(join(540276..540419,540969..541059,541145..541197,541968..542073,542721..542827,543029..543210,543326..543386))
location: region:540276-543386:-1
so has part: feature:543326-543386:-1:exon
so has part: feature:543029-543210:-1:exon
so has part: feature:542721-542827:-1:exon
so has part: feature:541968-542073:-1:exon
so has part: feature:541145-541197:-1:exon
so has part: feature:540969-541059:-1:exon
so has part: feature:540276-540419:-1:exon

XP_033928407.1
type: Protein
SIO_000068: ncbiprotein

position:540276:-1
position: 540276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543386:-1
position: 543386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543326-543386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543029-543210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542721-542827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541968-542073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541145-541197:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540969-541059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540276-540419:-1:exon

LOC117437870
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 544098..550958
location: region:544098-550958:1
so has part: feature:544098-550958:1:exon
subclass of: SO_0000010

117437870
type: Gene
SIO_000068: ncbigene

position:544098:1
position: 544098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550958:1
position: 550958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544098-550958:1:exon

LOC117437870
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437870
product: purine nucleoside phosphorylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072515.1
SIO_010081: LOC117437870
subclass of: SO_0000673
so part of: LOC117437870
location: join(544098..544140,544268..544431,545360..545463,547321..547496,548448..548629,550207..550958)
location: region:544098-550958:1
so has part: feature:544098-544140:1:exon
so has part: feature:544268-544431:1:exon
so has part: feature:545360-545463:1:exon
so has part: feature:547321-547496:1:exon
so has part: feature:548448-548629:1:exon
so has part: feature:550207-550958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544098-544140:1:exon

position:544140:1
position: 544140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:544268-544431:1:exon

position:544268:1
position: 544268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544431:1
position: 544431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:545360-545463:1:exon

position:545360:1
position: 545360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545463:1
position: 545463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:547321-547496:1:exon

position:547321:1
position: 547321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547496:1
position: 547496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:548448-548629:1:exon

position:548448:1
position: 548448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548629:1
position: 548629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:550207-550958:1:exon

position:550207:1
position: 550207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: purine nucleoside phosphorylase
translation: MDASYEACAEAAAWLRARLKQAPVVGLVCGSGLGALAQELQQPQSFDYGDIPHFPRSTVQGHAGRLLVGTLGGCPCAVMQGRFHLYEGYSPAQVALPVRTLALLGAHTVVLTNAAGSLREGLDPGDLLVIRDHIDLPGLAGRSPLVGANDSRFGPRFPVMAGAYDPALRRLALALAPPPLRARAGVYCGVGGPSYETPAECALLRMLGGDAVGMSTVAEAAAARHCGLRVLGLSLITNAAASHEEEEEEGPEHAKDMEHAKEHAKEHAKEHAKDTEHAKDKAHQEVLDAAQAGARLLAQLLLALAPRLQHV
SIO_010081: LOC117437870
subclass of: SO_0000673
so part of: LOC117437870
location: join(544130..544140,544268..544431,545360..545463,547321..547496,548448..548629,550207..550505)
location: region:544130-550505:1
so has part: feature:544130-544140:1:exon
so has part: feature:544268-544431:1:exon
so has part: feature:545360-545463:1:exon
so has part: feature:547321-547496:1:exon
so has part: feature:548448-548629:1:exon
so has part: feature:550207-550505:1:exon

XP_033928406.1
type: Protein
SIO_000068: ncbiprotein

position:544130:1
position: 544130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550505:1
position: 550505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544130-544140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544268-544431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:545360-545463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547321-547496:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548448-548629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:550207-550505:1:exon

LOC117437872
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 551746..558485
location: region:551746-558485:1
so has part: feature:551746-558485:1:exon
subclass of: SO_0000010

117437872
type: Gene
SIO_000068: ncbigene

position:551746:1
position: 551746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558485:1
position: 558485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551746-558485:1:exon

LOC117437872
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437872
product: protein NDRG2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072517.1
SIO_010081: LOC117437872
subclass of: SO_0000673
so part of: LOC117437872
location: join(551746..551808,551936..551992,553067..553172,553838..553958,554649..554711,554826..554886,555526..555612,555737..555793,555958..556052,556299..556343,556426..556477,556588..556635,556726..556761,557251..557302,558264..558485)
location: region:551746-558485:1
so has part: feature:551746-551808:1:exon
so has part: feature:551936-551992:1:exon
so has part: feature:553067-553172:1:exon
so has part: feature:553838-553958:1:exon
so has part: feature:554649-554711:1:exon
so has part: feature:554826-554886:1:exon
so has part: feature:555526-555612:1:exon
so has part: feature:555737-555793:1:exon
so has part: feature:555958-556052:1:exon
so has part: feature:556299-556343:1:exon
so has part: feature:556426-556477:1:exon
so has part: feature:556588-556635:1:exon
so has part: feature:556726-556761:1:exon
so has part: feature:557251-557302:1:exon
so has part: feature:558264-558485:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:551746-551808:1:exon

position:551808:1
position: 551808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551936-551992:1:exon

position:551936:1
position: 551936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551992:1
position: 551992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553067-553172:1:exon

position:553067:1
position: 553067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553172:1
position: 553172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:553838-553958:1:exon

position:553838:1
position: 553838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553958:1
position: 553958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:554649-554711:1:exon

position:554649:1
position: 554649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554711:1
position: 554711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:554826-554886:1:exon

position:554826:1
position: 554826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554886:1
position: 554886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:555526-555612:1:exon

position:555526:1
position: 555526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555612:1
position: 555612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:555737-555793:1:exon

position:555737:1
position: 555737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555793:1
position: 555793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:555958-556052:1:exon

position:555958:1
position: 555958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556052:1
position: 556052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:556299-556343:1:exon

position:556299:1
position: 556299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556343:1
position: 556343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:556426-556477:1:exon

position:556426:1
position: 556426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556477:1
position: 556477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:556588-556635:1:exon

position:556588:1
position: 556588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556635:1
position: 556635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:556726-556761:1:exon

position:556726:1
position: 556726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556761:1
position: 556761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:557251-557302:1:exon

position:557251:1
position: 557251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557302:1
position: 557302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:558264-558485:1:exon

position:558264:1
position: 558264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437872
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG2-like
translation: MMELNEAAAPPPPPEGKGAVLETPYGPVAVAMLGTPRPGRPVILTLPDVGHTSCSCFGPLFALEEMQELLRSFLVLHLDPPGMEAGAAPYPPAYQYPSMEQLASMLPCILQPLNIKSIVGIGVGAGAFVLAKFGLLHPDAVEGLVLVNIDPKAKGWMDWAAHKLSGLTMSTNEMILAHLFTQAELSDSPPYVQQVRQHLEGGTNSAHLWTMYSSRGDLGLQRSGAGSLRCPVLLVVGDESPHVDAVVECNAKLDPTQTSFLKMADGGGQPQITQPARLTEAFKYFLQGMGYMAASAMTRLSRSRTASVSSSTSGEGERGRSRTLSRGSTGGGAGGTAPQ
SIO_010081: LOC117437872
subclass of: SO_0000673
so part of: LOC117437872
location: join(551942..551992,553067..553172,553838..553958,554649..554711,554826..554886,555526..555612,555737..555793,555958..556052,556299..556343,556426..556477,556588..556635,556726..556761,557251..557302,558264..558409)
location: region:551942-558409:1
so has part: feature:551942-551992:1:exon
so has part: feature:553067-553172:1:exon
so has part: feature:553838-553958:1:exon
so has part: feature:554649-554711:1:exon
so has part: feature:554826-554886:1:exon
so has part: feature:555526-555612:1:exon
so has part: feature:555737-555793:1:exon
so has part: feature:555958-556052:1:exon
so has part: feature:556299-556343:1:exon
so has part: feature:556426-556477:1:exon
so has part: feature:556588-556635:1:exon
so has part: feature:556726-556761:1:exon
so has part: feature:557251-557302:1:exon
so has part: feature:558264-558409:1:exon

XP_033928408.1
type: Protein
SIO_000068: ncbiprotein

position:551942:1
position: 551942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558409:1
position: 558409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551942-551992:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553067-553172:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553838-553958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554649-554711:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554826-554886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555526-555612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555737-555793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555958-556052:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:556299-556343:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556426-556477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556588-556635:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:556726-556761:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:557251-557302:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:558264-558409:1:exon

LOC117437881
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(560365..569392)
location: region:560365-569392:-1
so has part: feature:560365-569392:-1:exon
subclass of: SO_0000010

117437881
type: Gene
SIO_000068: ncbigene

position:560365:-1
position: 560365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569392:-1
position: 569392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560365-569392:-1:exon

LOC117437881
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437881
product: NOP9 nucleolar protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072530.1
SIO_010081: LOC117437881
subclass of: SO_0000673
so part of: LOC117437881
location: complement(join(560365..560648,561340..561445,562552..562755,564020..564130,564918..565058,565694..565883,566698..566824,566897..567046,567944..568324,569208..569392))
location: region:560365-569392:-1
so has part: feature:569208-569392:-1:exon
so has part: feature:567944-568324:-1:exon
so has part: feature:566897-567046:-1:exon
so has part: feature:566698-566824:-1:exon
so has part: feature:565694-565883:-1:exon
so has part: feature:564918-565058:-1:exon
so has part: feature:564020-564130:-1:exon
so has part: feature:562552-562755:-1:exon
so has part: feature:561340-561445:-1:exon
so has part: feature:560365-560648:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569208-569392:-1:exon

position:569208:-1
position: 569208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:567944-568324:-1:exon

position:567944:-1
position: 567944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568324:-1
position: 568324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:566897-567046:-1:exon

position:566897:-1
position: 566897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567046:-1
position: 567046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:566698-566824:-1:exon

position:566698:-1
position: 566698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566824:-1
position: 566824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:565694-565883:-1:exon

position:565694:-1
position: 565694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565883:-1
position: 565883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:564918-565058:-1:exon

position:564918:-1
position: 564918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565058:-1
position: 565058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:564020-564130:-1:exon

position:564020:-1
position: 564020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564130:-1
position: 564130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:562552-562755:-1:exon

position:562552:-1
position: 562552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562755:-1
position: 562755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:561340-561445:-1:exon

position:561340:-1
position: 561340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561445:-1
position: 561445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:560365-560648:-1:exon

position:560648:-1
position: 560648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437881
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 9
translation: MAVKRSGRTEAGSGSRPRFRAGARARLDPDTAAYFRRALETLQEGLSPEELALFTPNVLHEASMAAPIVALDPGGSRLLEALLPTAPLPLMGQLLPPLLQGGLQGPMGHPLGARVLEAALLRVLSAMGQGEAAMGQVEDAIGRLGVTVGGALVAAAKHPPSSFVVRALLRVLGGAPQEGRPPGGAGLKPQWAEPESKGAEPKPKGAELPPSFPPLLEQLAEAFEKHLQSLLSPPCASLCLQVALEVLHRSQSPSCARLCCAVIGQLAPGPGGLVPALEDPTRSRVLEAAIGVMTPPLLRELYQSELKGRLRGVANHRVANHGLQRLLDHTPYDVVEAVLSELGPSLAEPLTRGHHGVLTALMGACRRHPPLQQGALRCLLQAFGCWEPANRRKDCVRILAKLRPFEGGAKEPEGEELELPLPASLLLHHVLHFRDPAPVLGGLRSLPPPSLLALAHAQHGRRLWGALLSSASVRACVKQRLLRRLKGHWASLACHRTGSRVLEAAWAAASGPTREAIASELAAHQGALQRDPYGRRVARAIDLERFLRQRPSWRTERHPPPP
SIO_010081: LOC117437881
subclass of: SO_0000673
so part of: LOC117437881
location: complement(join(560524..560648,561340..561445,562552..562755,564020..564130,564918..565058,565694..565883,566698..566824,566897..567046,567944..568324,569208..569361))
location: region:560524-569361:-1
so has part: feature:569208-569361:-1:exon
so has part: feature:567944-568324:-1:exon
so has part: feature:566897-567046:-1:exon
so has part: feature:566698-566824:-1:exon
so has part: feature:565694-565883:-1:exon
so has part: feature:564918-565058:-1:exon
so has part: feature:564020-564130:-1:exon
so has part: feature:562552-562755:-1:exon
so has part: feature:561340-561445:-1:exon
so has part: feature:560524-560648:-1:exon

XP_033928421.1
type: Protein
SIO_000068: ncbiprotein

position:560524:-1
position: 560524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569361:-1
position: 569361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569208-569361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567944-568324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:566897-567046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:566698-566824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:565694-565883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:564918-565058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564020-564130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562552-562755:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:561340-561445:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:560524-560648:-1:exon

LOC115945969
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 569514..579939
location: region:569514-579939:1
so has part: feature:569514-579939:1:exon
subclass of: SO_0000010

115945969
type: Gene
SIO_000068: ncbigene

position:569514:1
position: 569514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579939:1
position: 579939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569514-579939:1:exon

LOC115945969
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945969
product: Rab geranylgeranyltransferase subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072531.1
SIO_010081: LOC115945969
subclass of: SO_0000673
so part of: LOC115945969
location: join(569514..569561,569687..569731,570308..570409,571775..571890,572798..572964,573558..573716,574458..574541,575302..575384,575484..575576,576530..576626,576699..576750,576842..576930,577506..577594,577791..577907,578681..578794,579036..579123,579735..579939)
location: region:569514-579939:1
so has part: feature:569514-569561:1:exon
so has part: feature:569687-569731:1:exon
so has part: feature:570308-570409:1:exon
so has part: feature:571775-571890:1:exon
so has part: feature:572798-572964:1:exon
so has part: feature:573558-573716:1:exon
so has part: feature:574458-574541:1:exon
so has part: feature:575302-575384:1:exon
so has part: feature:575484-575576:1:exon
so has part: feature:576530-576626:1:exon
so has part: feature:576699-576750:1:exon
so has part: feature:576842-576930:1:exon
so has part: feature:577506-577594:1:exon
so has part: feature:577791-577907:1:exon
so has part: feature:578681-578794:1:exon
so has part: feature:579036-579123:1:exon
so has part: feature:579735-579939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569514-569561:1:exon

position:569561:1
position: 569561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:569687-569731:1:exon

position:569687:1
position: 569687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569731:1
position: 569731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:570308-570409:1:exon

position:570308:1
position: 570308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570409:1
position: 570409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:571775-571890:1:exon

position:571775:1
position: 571775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571890:1
position: 571890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:572798-572964:1:exon

position:572798:1
position: 572798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572964:1
position: 572964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:573558-573716:1:exon

position:573558:1
position: 573558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573716:1
position: 573716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:574458-574541:1:exon

position:574458:1
position: 574458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574541:1
position: 574541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:575302-575384:1:exon

position:575302:1
position: 575302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575384:1
position: 575384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:575484-575576:1:exon

position:575484:1
position: 575484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575576:1
position: 575576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:576530-576626:1:exon

position:576530:1
position: 576530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576626:1
position: 576626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:576699-576750:1:exon

position:576699:1
position: 576699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576750:1
position: 576750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:576842-576930:1:exon

position:576842:1
position: 576842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576930:1
position: 576930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:577506-577594:1:exon

position:577506:1
position: 577506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577594:1
position: 577594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:577791-577907:1:exon

position:577791:1
position: 577791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577907:1
position: 577907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:578681-578794:1:exon

position:578681:1
position: 578681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578794:1
position: 578794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:579036-579123:1:exon

position:579036:1
position: 579036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579123:1
position: 579123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:579735-579939:1:exon

position:579735:1
position: 579735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115945969
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl transferase type-2 subunit alpha
translation: MHGRLKSRPPDAARLRQREEKLRKYRESMRELRECQQGGAVLELTASVLAANPDVATCWGRRREALLLEPPSQWVDSELGFVASCLALNPKSYGAWHHRAWTLRWVPAAAAAAAELALCERHLAADPRNFHAWEHRRALTSDPSSELQFTQQLLARDFSNYSAWHQRLKLLQGELSSDTLRQELELVRNAAFTDPHDQSAWIYLRCALSQPLPPPRILSLYFHREDPTLAITFSRPIVAGPELGVILDGDPMDGKWRSAEGGARSSHTWLLDLPPAPPTSPLHIQVTWAPGPAHCELTLQSGENEAWWQEPIAARELFWPEVGVSEAELLQAQAQWCRELRELEPQSRGCLLALALLLWALEPLEHEEETRSCLQELKASDPMRRGFACDAASRLEVAAALLRRGAGPDGELRLRGKALTSLPLLEHMALVPCLDLAHNALGRLPAAMGALRRLKVLDVAHNNLRSLQGFPPLPWLEEMGLEGNPISHASALSPLAACPRLARLRLAGTPLASAPDAAAHVTQLLPRVDVSLG
SIO_010081: LOC115945969
subclass of: SO_0000673
so part of: LOC115945969
location: join(569729..569731,570308..570409,571775..571890,572798..572964,573558..573716,574458..574541,575302..575384,575484..575576,576530..576626,576699..576750,576842..576930,577506..577594,577791..577907,578681..578794,579036..579123,579735..579883)
location: region:569729-579883:1
so has part: feature:569729-569731:1:exon
so has part: feature:570308-570409:1:exon
so has part: feature:571775-571890:1:exon
so has part: feature:572798-572964:1:exon
so has part: feature:573558-573716:1:exon
so has part: feature:574458-574541:1:exon
so has part: feature:575302-575384:1:exon
so has part: feature:575484-575576:1:exon
so has part: feature:576530-576626:1:exon
so has part: feature:576699-576750:1:exon
so has part: feature:576842-576930:1:exon
so has part: feature:577506-577594:1:exon
so has part: feature:577791-577907:1:exon
so has part: feature:578681-578794:1:exon
so has part: feature:579036-579123:1:exon
so has part: feature:579735-579883:1:exon

XP_033928422.1
type: Protein
SIO_000068: ncbiprotein

position:569729:1
position: 569729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579883:1
position: 579883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569729-569731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570308-570409:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571775-571890:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572798-572964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573558-573716:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574458-574541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575302-575384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575484-575576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576530-576626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576699-576750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576842-576930:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:577506-577594:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:577791-577907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:578681-578794:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:579036-579123:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:579735-579883:1:exon

LOC117437867
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 580865..603754
location: region:580865-603754:1
so has part: feature:580865-603754:1:exon
subclass of: SO_0000010

117437867
type: Gene
SIO_000068: ncbigene

position:580865:1
position: 580865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603754:1
position: 603754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580865-603754:1:exon

LOC117437867
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437867
product: transglutaminase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072512.1
SIO_010081: LOC117437867
subclass of: SO_0000673
so part of: LOC117437867
location: join(580865..581174,582072..582204,583425..583644,586398..586577,587369..587647,588813..588931,590057..590164,591830..592004,593638..593776,594393..594496,594710..594798,595286..595439,596464..596742,598191..598351,600672..600808,602234..602388,603711..603754)
location: region:580865-603754:1
so has part: feature:580865-581174:1:exon
so has part: feature:582072-582204:1:exon
so has part: feature:583425-583644:1:exon
so has part: feature:586398-586577:1:exon
so has part: feature:587369-587647:1:exon
so has part: feature:588813-588931:1:exon
so has part: feature:590057-590164:1:exon
so has part: feature:591830-592004:1:exon
so has part: feature:593638-593776:1:exon
so has part: feature:594393-594496:1:exon
so has part: feature:594710-594798:1:exon
so has part: feature:595286-595439:1:exon
so has part: feature:596464-596742:1:exon
so has part: feature:598191-598351:1:exon
so has part: feature:600672-600808:1:exon
so has part: feature:602234-602388:1:exon
so has part: feature:603711-603754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580865-581174:1:exon

position:581174:1
position: 581174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582072-582204:1:exon

position:582072:1
position: 582072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582204:1
position: 582204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:583425-583644:1:exon

position:583425:1
position: 583425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583644:1
position: 583644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:586398-586577:1:exon

position:586398:1
position: 586398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586577:1
position: 586577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:587369-587647:1:exon

position:587369:1
position: 587369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587647:1
position: 587647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:588813-588931:1:exon

position:588813:1
position: 588813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588931:1
position: 588931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:590057-590164:1:exon

position:590057:1
position: 590057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590164:1
position: 590164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:591830-592004:1:exon

position:591830:1
position: 591830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592004:1
position: 592004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:593638-593776:1:exon

position:593638:1
position: 593638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593776:1
position: 593776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:594393-594496:1:exon

position:594393:1
position: 594393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594496:1
position: 594496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:594710-594798:1:exon

position:594710:1
position: 594710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594798:1
position: 594798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:595286-595439:1:exon

position:595286:1
position: 595286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595439:1
position: 595439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:596464-596742:1:exon

position:596464:1
position: 596464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596742:1
position: 596742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:598191-598351:1:exon

position:598191:1
position: 598191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598351:1
position: 598351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:600672-600808:1:exon

position:600672:1
position: 600672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600808:1
position: 600808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:602234-602388:1:exon

position:602234:1
position: 602234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602388:1
position: 602388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:603711-603754:1:exon

position:603711:1
position: 603711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437867
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glutamine gamma-glutamyltransferase K
translation: MAAADPRWDPGRWAAASLRARGAPEPRPGPRRGLWRRLCRCCGHCCGRTAERRWEPDSREAPARRGLQAARPGQLIPLSLSIGCPEDPVSHHTADFRCPVLVVRRGQPFSLCLRLPRALRQPQDDLCVELTLGPAPQVAKGTHVLIPLGESSATGWTAEEEGGGAEEGAGPGAGHALRLRVTAPPHAPIGRYRLSVRTRTEEGGEYAAPFQERHDVIVLFNPWCPEDSVYMEPTSDLNEYVLNETGRIFYGTEEQIVERSWNYGQFDQGVLDACLYILDRRGMPHSARGDPVMVSRVVSAMVNSLDDNGVLVGNWTGRYEAGTNPSAWAGSVEILLGFHRTGAPVRYGQCWVFAGVMTTVLRCLGLPTRTVTNYNSAHDTDVSLTTDIYLDESMKPMERLNTDSVWNFHVWNDCWMKRPDLPEGHDGWQVVDATPQETSSGLFCCGPCSVEAVKNGEVFLKYDTPFVFAEVNSDKVYWQRQPNGTFAVVHVEEGAIGRRISTMGPGSGARLDITHLYKHPEGSAEERQAVSKATSHGSRPPRGRGSGSALTLALALAGPAVAGAALELRVRLRNQAPEPRTLRLRLALAAVRYTGVTGPAFRQEVHRREIAPGQEEVIPLSVPYREYQGQVQEQDALKVTATGTVEESGEVLARELRVQLQLPQLTLTLLAPAVVGQEAPIQVLFQNPLPEALTGASLRMEGAGLECPKPLALGSVGAGQTVRLRQAVVPLKAGLRRLVATLESPQLGPLHGLLSLDVAEGAGPGGGARENDVTTGARK
SIO_010081: LOC117437867
subclass of: SO_0000673
so part of: LOC117437867
location: join(583428..583644,586398..586577,587369..587647,588813..588931,590057..590164,591830..592004,593638..593776,594393..594496,594710..594798,595286..595439,596464..596742,598191..598351,600672..600808,602234..602388,603711..603754)
location: region:583428-603754:1
so has part: feature:583428-583644:1:exon
so has part: feature:586398-586577:1:exon
so has part: feature:587369-587647:1:exon
so has part: feature:588813-588931:1:exon
so has part: feature:590057-590164:1:exon
so has part: feature:591830-592004:1:exon
so has part: feature:593638-593776:1:exon
so has part: feature:594393-594496:1:exon
so has part: feature:594710-594798:1:exon
so has part: feature:595286-595439:1:exon
so has part: feature:596464-596742:1:exon
so has part: feature:598191-598351:1:exon
so has part: feature:600672-600808:1:exon
so has part: feature:602234-602388:1:exon
so has part: feature:603711-603754:1:exon

XP_033928403.1
type: Protein
SIO_000068: ncbiprotein

position:583428:1
position: 583428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583428-583644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586398-586577:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587369-587647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:588813-588931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:590057-590164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:591830-592004:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:593638-593776:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:594393-594496:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:594710-594798:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:595286-595439:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:596464-596742:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:598191-598351:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:600672-600808:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602234-602388:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:603711-603754:1:exon

LOC117437868
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 603810..608856
location: region:603810-608856:1
so has part: feature:603810-608856:1:exon
subclass of: SO_0000010

117437868
type: Gene
SIO_000068: ncbigene

position:603810:1
position: 603810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608856:1
position: 608856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603810-608856:1:exon

LOC117437868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437868
product: TERF1 interacting nuclear factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072513.1
SIO_010081: LOC117437868
subclass of: SO_0000673
so part of: LOC117437868
location: join(603810..603883,603975..604125,604542..604631,605465..605557,606385..606496,607038..607137,607218..607270,607448..607747,608289..608336,608816..608856)
location: region:603810-608856:1
so has part: feature:603810-603883:1:exon
so has part: feature:603975-604125:1:exon
so has part: feature:604542-604631:1:exon
so has part: feature:605465-605557:1:exon
so has part: feature:606385-606496:1:exon
so has part: feature:607038-607137:1:exon
so has part: feature:607218-607270:1:exon
so has part: feature:607448-607747:1:exon
so has part: feature:608289-608336:1:exon
so has part: feature:608816-608856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603810-603883:1:exon

position:603883:1
position: 603883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603975-604125:1:exon

position:603975:1
position: 603975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604125:1
position: 604125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:604542-604631:1:exon

position:604542:1
position: 604542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604631:1
position: 604631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:605465-605557:1:exon

position:605465:1
position: 605465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605557:1
position: 605557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:606385-606496:1:exon

position:606385:1
position: 606385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606496:1
position: 606496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:607038-607137:1:exon

position:607038:1
position: 607038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607137:1
position: 607137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:607218-607270:1:exon

position:607218:1
position: 607218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607270:1
position: 607270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:607448-607747:1:exon

position:607448:1
position: 607448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607747:1
position: 607747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:608289-608336:1:exon

position:608289:1
position: 608289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608336:1
position: 608336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:608816-608856:1:exon

position:608816:1
position: 608816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TERF1-interacting nuclear factor 2
translation: MADTVPAASGSDGDDGAELRCALAAAWHVMRARRVREFHHVVDVVDSLRDVPRSFKARTWTRLRMGLRAAVVMQMLRDGQSGDVISDAMRRYFPPGSSQKEQPDVAEAQEHFVRLVSELVQNPRKRKWYLQRWAPHTYGRKLVTNLKSLLFELLLRIDSALPPPRPRQDAGPDP
SIO_010081: LOC117437868
subclass of: SO_0000673
so part of: LOC117437868
location: join(603825..603883,603975..604125,604542..604631,605465..605557,606385..606496,607038..607057)
location: region:603825-607057:1
so has part: feature:603825-603883:1:exon
so has part: feature:603975-604125:1:exon
so has part: feature:604542-604631:1:exon
so has part: feature:605465-605557:1:exon
so has part: feature:606385-606496:1:exon
so has part: feature:607038-607057:1:exon

XP_033928404.1
type: Protein
SIO_000068: ncbiprotein

position:603825:1
position: 603825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607057:1
position: 607057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603825-603883:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603975-604125:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604542-604631:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:605465-605557:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:606385-606496:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607038-607057:1:exon

LOC117437869
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 609593..612267
location: region:609593-612267:1
so has part: feature:609593-612267:1:exon
subclass of: SO_0000010

117437869
type: Gene
SIO_000068: ncbigene

position:609593:1
position: 609593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612267:1
position: 612267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609593-612267:1:exon

LOC117437869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437869
product: NEDD8 ubiquitin like modifier
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072514.1
SIO_010081: LOC117437869
subclass of: SO_0000673
so part of: LOC117437869
location: join(609593..609690,610086..610133,611080..611162,612046..612267)
location: region:609593-612267:1
so has part: feature:609593-609690:1:exon
so has part: feature:610086-610133:1:exon
so has part: feature:611080-611162:1:exon
so has part: feature:612046-612267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609593-609690:1:exon

position:609690:1
position: 609690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610086-610133:1:exon

position:610086:1
position: 610086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610133:1
position: 610133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611080-611162:1:exon

position:611080:1
position: 611080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611162:1
position: 611162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:612046-612267:1:exon

position:612046:1
position: 612046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD8
translation: MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGGGAGPH
SIO_010081: LOC117437869
subclass of: SO_0000673
so part of: LOC117437869
location: join(609673..609690,610086..610133,611080..611162,612046..612142)
location: region:609673-612142:1
so has part: feature:609673-609690:1:exon
so has part: feature:610086-610133:1:exon
so has part: feature:611080-611162:1:exon
so has part: feature:612046-612142:1:exon

XP_033928405.1
type: Protein
SIO_000068: ncbiprotein

position:609673:1
position: 609673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612142:1
position: 612142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609673-609690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610086-610133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611080-611162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:612046-612142:1:exon