Melopsittacus undulatus isolate bMelUnd1 chromosome 28, bMelUnd1.mat.Z, whole genome shotgun sequence.
type: Entry
definition: Melopsittacus undulatus isolate bMelUnd1 chromosome 28, bMelUnd1.mat.Z, whole genome shotgun sequence.
sequence version: NC_047554.1
sequence date: 2020-05-06
sequence: sequence
division: CON
label: NC_047554.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA629576
dblink: SAMN12623090
keyword: WGS
keyword: RefSeq
source: Melopsittacus undulatus (budgerigar)
organism: Melopsittacus undulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittaculidae; Melopsittacus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022659.1.\nAssembly name: bMelUnd1.mat.Z\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the G10K on 2020/04/13. The\noriginal whole-genome shotgun project has the accession\nJAAVWG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: G10K\nAssembly Date :: 24-FEB-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; Freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-02-24; VGP assembly\n pipeline v. 1.6\nAssembly Name :: bMelUnd1.mat.Z\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 61.11x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Melopsittacus undulatus Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 352337
topology: linear
so has quality: SO_0000987
location: 1..352337
location: region:1-352337:1
RO_0002162: 13146

NC_047554
type: RefSeq
SIO_000068: refseq

PRJNA629576
type: BioProject
SIO_000068: bioproject

SAMN12623090
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352337:1
position: 352337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-352337:1:source
so part of: sequence
organism: Melopsittacus undulatus
mol type: genomic DNA
isolate: bMelUnd1
chromosome: 28
sex: female
tissue type: blood
dev stage: juvenile
country: USA: New Mexico State University
lat lon: 32.278282 N 106.74994 W
collection date: 02-Nov-2018
collected by: Timothy Wright, Justin Apodaca

13146
type: Taxonomy
SIO_000068: taxonomy

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 9044..9151
location: region:9044-9151:1
so has part: feature:9044-9151:1:exon
subclass of: SO_0000663

117437820
type: Gene
SIO_000068: ncbigene

position:9044:1
position: 9044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9151:1
position: 9151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9044-9151:1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:9078..9080,aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: join(9044..9081,9106..9151)
location: region:9044-9151:1
so has part: feature:9044-9081:1:exon
so has part: feature:9106-9151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9044-9081:1:exon

position:9081:1
position: 9081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9106-9151:1:exon

position:9106:1
position: 9106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 9308..9379
location: region:9308-9379:1
so has part: feature:9308-9379:1:exon
subclass of: SO_0000663

117437826
type: Gene
SIO_000068: ncbigene

position:9308:1
position: 9308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9379:1
position: 9379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9308-9379:1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:9341..9343,aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: 9308..9379
location: region:9308-9379:1
so has part: feature:9308-9379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9308-9379:1:exon

LOC101868176
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14121..18585
location: region:14121-18585:1
so has part: feature:14121-18585:1:exon
subclass of: SO_0000010

101868176
type: Gene
SIO_000068: ncbigene

position:14121:1
position: 14121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18585:1
position: 18585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14121-18585:1:exon

LOC101868176
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868176
product: interleukin 4 induced 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072434.1
SIO_010081: LOC101868176
subclass of: SO_0000673
so part of: LOC101868176
location: join(14121..14151,15658..15872,16208..16320,16526..16727,17118..17186,17484..17617,17760..18585)
location: region:14121-18585:1
so has part: feature:14121-14151:1:exon
so has part: feature:15658-15872:1:exon
so has part: feature:16208-16320:1:exon
so has part: feature:16526-16727:1:exon
so has part: feature:17118-17186:1:exon
so has part: feature:17484-17617:1:exon
so has part: feature:17760-18585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14121-14151:1:exon

position:14151:1
position: 14151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15658-15872:1:exon

position:15658:1
position: 15658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15872:1
position: 15872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16208-16320:1:exon

position:16208:1
position: 16208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16320:1
position: 16320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16526-16727:1:exon

position:16526:1
position: 16526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16727:1
position: 16727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17118-17186:1:exon

position:17118:1
position: 17118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17186:1
position: 17186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17484-17617:1:exon

position:17484:1
position: 17484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17617:1
position: 17617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17760-18585:1:exon

position:17760:1
position: 17760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868176
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-amino-acid oxidase
translation: MDPVSKPDTTVLSQLLLLAGLLSARSFPCFPECCLHDEDYEELLSIIEHGLEPAAHPADVLIVGAGISGLTAAKLLRDAGHRVTVLEASGRVGGRIRTHRPEGQDWYVELGAMRLPSKHRLVRELIRQFELKLNPFIQSDENTWYLLNGTRVRAKEVNRNPNILQYPVEPSERGKSAQQLYREALHKALKEFQATDCKEYLKKYDSFSTKEYLIKVGNLSRGAVQMIGDLLNEDSGFYLSFLDSLWGFHTFSDERFDEITGGFDQLPKAFHRALPNIIRFNSTVEKIITEGNKVHVHYRDGDIPTPTMVTTDYVLVTSTTRATRHIQFQPQLPAPKRRALRSLHYASSSKVALGCKERFWEQDGIRGGQSITDRPSRFIYYPSTHFPSGTSVLLASYTWNDDADFFLPLTEEQCLDVVFQDLAAIHGLSEGYLRDACPQYTIQRWQLDPHSQGAFAAFTPYQFTDYSWDLFQPHGRVHFAGEHTAQPHAWIDTAVKAAVRAASSIHRDSGDVLVLSTEQAGWALHREGL
SIO_010081: LOC101868176
subclass of: SO_0000673
so part of: LOC101868176
location: join(14121..14151,15658..15872,16208..16320,16526..16727,17118..17186,17484..17617,17760..18585)
location: region:14121-18585:1
so has part: feature:14121-14151:1:exon
so has part: feature:15658-15872:1:exon
so has part: feature:16208-16320:1:exon
so has part: feature:16526-16727:1:exon
so has part: feature:17118-17186:1:exon
so has part: feature:17484-17617:1:exon
so has part: feature:17760-18585:1:exon

XP_033928325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14121-14151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15658-15872:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16208-16320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16526-16727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17118-17186:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17484-17617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17760-18585:1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(19720..19793)
location: region:19720-19793:-1
so has part: feature:19720-19793:-1:exon
subclass of: SO_0000663

115945926
type: Gene
SIO_000068: ncbigene

position:19720:-1
position: 19720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19793:-1
position: 19793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19720-19793:-1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(19757..19759),aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: complement(19720..19793)
location: region:19720-19793:-1
so has part: feature:19720-19793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19720-19793:-1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(20108..20180)
location: region:20108-20180:-1
so has part: feature:20108-20180:-1:exon
subclass of: SO_0000663

115945925
type: Gene
SIO_000068: ncbigene

position:20108:-1
position: 20108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20180:-1
position: 20180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20108-20180:-1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(20145..20147),aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: complement(20108..20180)
location: region:20108-20180:-1
so has part: feature:20108-20180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20108-20180:-1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 20416..20497
location: region:20416-20497:1
so has part: feature:20416-20497:1:exon
subclass of: SO_0000663

115945927
type: Gene
SIO_000068: ncbigene

position:20416:1
position: 20416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20497:1
position: 20497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20416-20497:1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:20450..20452,aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: 20416..20497
location: region:20416-20497:1
so has part: feature:20416-20497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20416-20497:1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(20783..20855)
location: region:20783-20855:-1
so has part: feature:20783-20855:-1:exon
subclass of: SO_0000663

115946070
type: Gene
SIO_000068: ncbigene

position:20783:-1
position: 20783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20855:-1
position: 20855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20783-20855:-1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(20820..20822),aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: complement(20783..20855)
location: region:20783-20855:-1
so has part: feature:20783-20855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20783-20855:-1:exon

TRNAP-UGG
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAP-UGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(21625..21696)
location: region:21625-21696:-1
so has part: feature:21625-21696:-1:exon
subclass of: SO_0000663

115946068
type: Gene
SIO_000068: ncbigene

position:21625:-1
position: 21625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21696:-1
position: 21696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21625-21696:-1:exon

TRNAP-UGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAP-UGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(21662..21664),aa:Pro,seq:tgg)
SIO_010081: TRNAP-UGG
subclass of: SO_0000673
so part of: TRNAP-UGG
location: complement(21625..21696)
location: region:21625-21696:-1
so has part: feature:21625-21696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21625-21696:-1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(21861..21933)
location: region:21861-21933:-1
so has part: feature:21861-21933:-1:exon
subclass of: SO_0000663

117437821
type: Gene
SIO_000068: ncbigene

position:21861:-1
position: 21861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21933:-1
position: 21933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21861-21933:-1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(21898..21900),aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: complement(21861..21933)
location: region:21861-21933:-1
so has part: feature:21861-21933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21861-21933:-1:exon

LOC101880893
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101880893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22978..32007)
location: region:22978-32007:-1
so has part: feature:22978-32007:-1:exon
subclass of: SO_0000010

101880893
type: Gene
SIO_000068: ncbigene

position:22978:-1
position: 22978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32007:-1
position: 32007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22978-32007:-1:exon

LOC101880893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101880893
product: E3 ubiquitin-protein ligase TRIM7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072453.1
SIO_010081: LOC101880893
subclass of: SO_0000673
so part of: LOC101880893
location: complement(join(22978..23522,24680..24715,25201..25316,25455..25477,27031..27261,29883..29978,31574..32007))
location: region:22978-32007:-1
so has part: feature:31574-32007:-1:exon
so has part: feature:29883-29978:-1:exon
so has part: feature:27031-27261:-1:exon
so has part: feature:25455-25477:-1:exon
so has part: feature:25201-25316:-1:exon
so has part: feature:24680-24715:-1:exon
so has part: feature:22978-23522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31574-32007:-1:exon

position:31574:-1
position: 31574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29883-29978:-1:exon

position:29883:-1
position: 29883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29978:-1
position: 29978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27031-27261:-1:exon

position:27031:-1
position: 27031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27261:-1
position: 27261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25455-25477:-1:exon

position:25455:-1
position: 25455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25477:-1
position: 25477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:25201-25316:-1:exon

position:25201:-1
position: 25201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25316:-1
position: 25316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:24680-24715:-1:exon

position:24680:-1
position: 24680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24715:-1
position: 24715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22978-23522:-1:exon

position:23522:-1
position: 23522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101880893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101880893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like
translation: MAAVFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRSCIVKSWQELELDFPCPQCRELSQQRSFRPNRQLANMSEIISQFTLRGARAAEADGLCPKHREALKLYCKDDGSSICVVCDRSREHRPHAVVPVEEAAEEYKEKLQGRLDSLKKERQELLEFKVNDDKKTQELLESIVLERQKLLSEFERLRQFLQDQEHLLLGQLENMEKSITRRQNDNITDLSKGITLLNKLITELEEKVQQPTLQFLKDVMSIISRSDDVKCQKPVPVCTDMKMHVCNFSLKTVVLEKVLRKFRDNLRDELGRGEKEDLTLDPDTANQLLVLSADLRSVRMGCRKQELPDNPKRFDTNSRVLASTGFQSGRHYWEVEVGAEDGWAFGVAKESVRRKGLTQFSPEEGIWAIQQNGGRYWAVTTPQRTALSISRKLSRVRVYLDYEGEEVSFYDAENMQHIYTFNVAFKEKVFPLFSVCSTVTYLRLCP
SIO_010081: LOC101880893
subclass of: SO_0000673
so part of: LOC101880893
location: complement(join(23008..23522,24680..24715,25201..25316,25455..25477,27031..27261,29883..29978,31574..31990))
location: region:23008-31990:-1
so has part: feature:31574-31990:-1:exon
so has part: feature:29883-29978:-1:exon
so has part: feature:27031-27261:-1:exon
so has part: feature:25455-25477:-1:exon
so has part: feature:25201-25316:-1:exon
so has part: feature:24680-24715:-1:exon
so has part: feature:23008-23522:-1:exon

XP_033928344.1
type: Protein
SIO_000068: ncbiprotein

position:23008:-1
position: 23008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31990:-1
position: 31990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31574-31990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29883-29978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27031-27261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25455-25477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25201-25316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24680-24715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23008-23522:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(37772..37844)
location: region:37772-37844:-1
so has part: feature:37772-37844:-1:exon
subclass of: SO_0000663

117437822
type: Gene
SIO_000068: ncbigene

position:37772:-1
position: 37772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37844:-1
position: 37844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37772-37844:-1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(37809..37811),aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: complement(37772..37844)
location: region:37772-37844:-1
so has part: feature:37772-37844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37772-37844:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(39103..39175)
location: region:39103-39175:-1
so has part: feature:39103-39175:-1:exon
subclass of: SO_0000663

117437823
type: Gene
SIO_000068: ncbigene

position:39103:-1
position: 39103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39175:-1
position: 39175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39103-39175:-1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(39140..39142),aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: complement(39103..39175)
location: region:39103-39175:-1
so has part: feature:39103-39175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39103-39175:-1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(39708..39779)
location: region:39708-39779:-1
so has part: feature:39708-39779:-1:exon
subclass of: SO_0000663

117437824
type: Gene
SIO_000068: ncbigene

position:39708:-1
position: 39708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39779:-1
position: 39779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39708-39779:-1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(39744..39746),aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: complement(39708..39779)
location: region:39708-39779:-1
so has part: feature:39708-39779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39708-39779:-1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(41578..41650)
location: region:41578-41650:-1
so has part: feature:41578-41650:-1:exon
subclass of: SO_0000663

117437825
type: Gene
SIO_000068: ncbigene

position:41578:-1
position: 41578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41650:-1
position: 41650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41578-41650:-1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(41615..41617),aa:Val,seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: complement(41578..41650)
location: region:41578-41650:-1
so has part: feature:41578-41650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41578-41650:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(41888..41960)
location: region:41888-41960:-1
so has part: feature:41888-41960:-1:exon
subclass of: SO_0000663

117437827
type: Gene
SIO_000068: ncbigene

position:41888:-1
position: 41888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41960:-1
position: 41960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41888-41960:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(41925..41927),aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(41888..41960)
location: region:41888-41960:-1
so has part: feature:41888-41960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41888-41960:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(42841..42913)
location: region:42841-42913:-1
so has part: feature:42841-42913:-1:exon
subclass of: SO_0000663

115945396
type: Gene
SIO_000068: ncbigene

position:42841:-1
position: 42841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42913:-1
position: 42913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42841-42913:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(42878..42880),aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(42841..42913)
location: region:42841-42913:-1
so has part: feature:42841-42913:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42841-42913:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 43131..43203
location: region:43131-43203:1
so has part: feature:43131-43203:1:exon
subclass of: SO_0000663

115945405
type: Gene
SIO_000068: ncbigene

position:43131:1
position: 43131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43203:1
position: 43203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43131-43203:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:43164..43166,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 43131..43203
location: region:43131-43203:1
so has part: feature:43131-43203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43131-43203:1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 43348..43455
location: region:43348-43455:1
so has part: feature:43348-43455:1:exon
subclass of: SO_0000663

115945403
type: Gene
SIO_000068: ncbigene

position:43348:1
position: 43348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43455:1
position: 43455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43348-43455:1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:43382..43384,aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: join(43348..43385,43410..43455)
location: region:43348-43455:1
so has part: feature:43348-43385:1:exon
so has part: feature:43410-43455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43348-43385:1:exon

position:43385:1
position: 43385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43410-43455:1:exon

position:43410:1
position: 43410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 43808..43880
location: region:43808-43880:1
so has part: feature:43808-43880:1:exon
subclass of: SO_0000663

115945397
type: Gene
SIO_000068: ncbigene

position:43808:1
position: 43808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43880:1
position: 43880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43808-43880:1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:43841..43843,aa:Val,seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: 43808..43880
location: region:43808-43880:1
so has part: feature:43808-43880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43808-43880:1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(44157..44228)
location: region:44157-44228:-1
so has part: feature:44157-44228:-1:exon
subclass of: SO_0000663

117437828
type: Gene
SIO_000068: ncbigene

position:44157:-1
position: 44157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44228:-1
position: 44228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44157-44228:-1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(44193..44195),aa:Glu,seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: complement(44157..44228)
location: region:44157-44228:-1
so has part: feature:44157-44228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44157-44228:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(46052..46124)
location: region:46052-46124:-1
so has part: feature:46052-46124:-1:exon
subclass of: SO_0000663

117437829
type: Gene
SIO_000068: ncbigene

position:46052:-1
position: 46052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46124:-1
position: 46124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46052-46124:-1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(46089..46091),aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: complement(46052..46124)
location: region:46052-46124:-1
so has part: feature:46052-46124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46052-46124:-1:exon

LOC117437818
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 46668..55616
location: region:46668-55616:1
so has part: feature:46668-55616:1:exon
subclass of: SO_0000010

117437818
type: Gene
SIO_000068: ncbigene

position:46668:1
position: 46668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55616:1
position: 55616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46668-55616:1:exon

LOC117437818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437818
product: E3 ubiquitin-protein ligase TRIM41-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072462.1
SIO_010081: LOC117437818
subclass of: SO_0000673
so part of: LOC117437818
location: join(46668..47679,48690..48785,48958..49188,53081..53103,53348..53475,54589..55616)
location: region:46668-55616:1
so has part: feature:46668-47679:1:exon
so has part: feature:48690-48785:1:exon
so has part: feature:48958-49188:1:exon
so has part: feature:53081-53103:1:exon
so has part: feature:53348-53475:1:exon
so has part: feature:54589-55616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46668-47679:1:exon

position:47679:1
position: 47679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48690-48785:1:exon

position:48690:1
position: 48690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48785:1
position: 48785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48958-49188:1:exon

position:48958:1
position: 48958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49188:1
position: 49188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:53081-53103:1:exon

position:53081:1
position: 53081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53103:1
position: 53103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:53348-53475:1:exon

position:53348:1
position: 53348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53475:1
position: 53475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:54589-55616:1:exon

position:54589:1
position: 54589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437818
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM41-like
translation: MADPVETLQEEAICAICLDYFMDPVSIGCGHNFCRGCIAQLWAAEASEAAEASEAAEASEEEEEEEEEEEEEEEEELDVVEEEEDDGAEEEEGDGMWSEEEELWGEGEGLWGGXGGMYLGEEEFDEEVMEEDVEEEEEEEEEGEGEEEQPPGPFTCPQCRKSFAQRNFRPNLQLANMVQIIRQLHPRPQRPQPPGATGVTGVTGVTGGTGVTGVTGVTGGTGGTGGTGGTGGGPGPAERCQRHQEPLKLYCEVDEEAICVVCREARGHKQHSVVPLEEVLQDYRHKLQSHLEPLKKKLELVLKQKSNEEEKITELRAKMKLEMKELESDFERLHQFLVGEQVLLLQQLEERYQSLLGRQSSNVRLLQEQSVALRRLLAEAQDKSRQDGLRMLQDIKGTFIRCENMKFQEPEMVPVDVGKRYRNYFLQDVVMRKMEKVFYKVPQADVTLDPSTAHPRLSLSLDRRSVRLCERRPEPPEPPKASEWDLSVLGAPGFSSGRHCWQVEVCGRRGWALGAAPEPPRRKAMEPQPKREVWCVGSIGKRFQALTATEQTVLAPVERPRRFLLYLDYERGQLCFYNADNMSHIHTFNACFRERICPFFRVLAKGTRIKICA
SIO_010081: LOC117437818
subclass of: SO_0000673
so part of: LOC117437818
location: join(46830..47679,48690..48785,48958..49188,53081..53103,53348..53475,54589..55100)
location: region:46830-55100:1
so has part: feature:46830-47679:1:exon
so has part: feature:48690-48785:1:exon
so has part: feature:48958-49188:1:exon
so has part: feature:53081-53103:1:exon
so has part: feature:53348-53475:1:exon
so has part: feature:54589-55100:1:exon

XP_033928353.1
type: Protein
SIO_000068: ncbiprotein

position:46830:1
position: 46830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55100:1
position: 55100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46830-47679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48690-48785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48958-49188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53081-53103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53348-53475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:54589-55100:1:exon

LOC117437819
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57067..62998)
location: region:57067-62998:-1
so has part: feature:57067-62998:-1:exon
subclass of: SO_0000010

117437819
type: Gene
SIO_000068: ncbigene

position:57067:-1
position: 57067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62998:-1
position: 62998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57067-62998:-1:exon

LOC117437819
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437819
product: receptor for activated C kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 32 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072470.1
SIO_010081: LOC117437819
subclass of: SO_0000673
so part of: LOC117437819
location: complement(join(57067..57172,57334..57444,57626..57766,57846..57956,58054..58149,58265..58412,60245..60416,62759..62998))
location: region:57067-62998:-1
so has part: feature:62759-62998:-1:exon
so has part: feature:60245-60416:-1:exon
so has part: feature:58265-58412:-1:exon
so has part: feature:58054-58149:-1:exon
so has part: feature:57846-57956:-1:exon
so has part: feature:57626-57766:-1:exon
so has part: feature:57334-57444:-1:exon
so has part: feature:57067-57172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62759-62998:-1:exon

position:62759:-1
position: 62759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60245-60416:-1:exon

position:60245:-1
position: 60245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60416:-1
position: 60416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58265-58412:-1:exon

position:58265:-1
position: 58265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58412:-1
position: 58412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:58054-58149:-1:exon

position:58054:-1
position: 58054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58149:-1
position: 58149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:57846-57956:-1:exon

position:57846:-1
position: 57846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57956:-1
position: 57956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57626-57766:-1:exon

position:57626:-1
position: 57626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57766:-1
position: 57766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57334-57444:-1:exon

position:57334:-1
position: 57334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57444:-1
position: 57444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:57067-57172:-1:exon

position:57172:-1
position: 57172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437819
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor of activated protein C kinase 1
translation: MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
SIO_010081: LOC117437819
subclass of: SO_0000673
so part of: LOC117437819
location: complement(join(57107..57172,57334..57444,57626..57766,57846..57956,58054..58149,58265..58412,60245..60416,62759..62867))
location: region:57107-62867:-1
so has part: feature:62759-62867:-1:exon
so has part: feature:60245-60416:-1:exon
so has part: feature:58265-58412:-1:exon
so has part: feature:58054-58149:-1:exon
so has part: feature:57846-57956:-1:exon
so has part: feature:57626-57766:-1:exon
so has part: feature:57334-57444:-1:exon
so has part: feature:57107-57172:-1:exon

XP_033928361.1
type: Protein
SIO_000068: ncbiprotein

position:57107:-1
position: 57107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62867:-1
position: 62867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62759-62867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60245-60416:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58265-58412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58054-58149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57846-57956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57626-57766:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57334-57444:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57107-57172:-1:exon

LOC115947192
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115947192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 62762..79571
location: region:62762-79571:1
so has part: feature:62762-79571:1:exon
subclass of: SO_0000010

115947192
type: Gene
SIO_000068: ncbigene

position:62762:1
position: 62762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79571:1
position: 79571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62762-79571:1:exon

LOC115947192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115947192
product: E3 ubiquitin-protein ligase TRIM58-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072463.1
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(62762..63044,65010..65058,66042..66062,66214..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74071..74091,74242..74262,74332..74337,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79571)
location: region:62762-79571:1
so has part: feature:62762-63044:1:exon
so has part: feature:65010-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69677-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74071-74091:1:exon
so has part: feature:74242-74262:1:exon
so has part: feature:74332-74337:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62762-63044:1:exon

position:63044:1
position: 63044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65010-65058:1:exon

position:65010:1
position: 65010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65058:1
position: 65058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66042-66062:1:exon

position:66042:1
position: 66042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66062:1
position: 66062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:66214-66324:1:exon

position:66214:1
position: 66214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66324:1
position: 66324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:67425-67445:1:exon

position:67425:1
position: 67425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67445:1
position: 67445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:67850-67873:1:exon

position:67850:1
position: 67850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67873:1
position: 67873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:68912-68932:1:exon

position:68912:1
position: 68912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68932:1
position: 68932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:69244-69264:1:exon

position:69244:1
position: 69244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69264:1
position: 69264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:69457-69477:1:exon

position:69457:1
position: 69457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69477:1
position: 69477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:69677-69697:1:exon

position:69677:1
position: 69677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69697:1
position: 69697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:69859-69879:1:exon

position:69859:1
position: 69859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69879:1
position: 69879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:69985-70005:1:exon

position:69985:1
position: 69985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70005:1
position: 70005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:70154-70174:1:exon

position:70154:1
position: 70154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70174:1
position: 70174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:70436-70456:1:exon

position:70436:1
position: 70436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70456:1
position: 70456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:70549-70569:1:exon

position:70549:1
position: 70549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70569:1
position: 70569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:70729-70749:1:exon

position:70729:1
position: 70729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70749:1
position: 70749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:71124-71144:1:exon

position:71124:1
position: 71124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71144:1
position: 71144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:71238-71258:1:exon

position:71238:1
position: 71238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71258:1
position: 71258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:71340-71468:1:exon

position:71340:1
position: 71340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71468:1
position: 71468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:72465-72485:1:exon

position:72465:1
position: 72465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72485:1
position: 72485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:72767-72787:1:exon

position:72767:1
position: 72767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72787:1
position: 72787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:73165-73278:1:exon

position:73165:1
position: 73165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73278:1
position: 73278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:74071-74091:1:exon

position:74071:1
position: 74071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74091:1
position: 74091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:74242-74262:1:exon

position:74242:1
position: 74242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74262:1
position: 74262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:74332-74337:1:exon

position:74332:1
position: 74332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74337:1
position: 74337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:74559-74579:1:exon

position:74559:1
position: 74559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74579:1
position: 74579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:74782-74802:1:exon

position:74782:1
position: 74782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74802:1
position: 74802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:75787-75807:1:exon

position:75787:1
position: 75787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75807:1
position: 75807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:76024-76044:1:exon

position:76024:1
position: 76024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76044:1
position: 76044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:76163-76183:1:exon

position:76163:1
position: 76163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76183:1
position: 76183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:76269-76289:1:exon

position:76269:1
position: 76269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76289:1
position: 76289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:76651-76671:1:exon

position:76651:1
position: 76651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76671:1
position: 76671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:76815-76835:1:exon

position:76815:1
position: 76815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76835:1
position: 76835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:77040-77060:1:exon

position:77040:1
position: 77040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77060:1
position: 77060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:78951-79571:1:exon

position:78951:1
position: 78951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115947192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115947192
product: E3 ubiquitin-protein ligase TRIM58-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072465.1
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(62762..63044,65010..65058,66042..66062,66214..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74071..74091,74242..74262,74332..74337,74559..74579,74782..74802,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79571)
location: region:62762-79571:1
so has part: feature:62762-63044:1:exon
so has part: feature:65010-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69677-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74071-74091:1:exon
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so has part: feature:74332-74337:1:exon
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so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62762-63044:1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:71340-71468:1:exon

urn:…
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
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urn:…
SIO_000300: 25
SIO_000628: feature:74332-74337:1:exon

urn:…
SIO_000300: 26
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urn:…
SIO_000300: 27
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SIO_000300: 28
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urn:…
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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
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urn:…
SIO_000300: 32
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:78951-79571:1:exon

LOC115947192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115947192
product: E3 ubiquitin-protein ligase TRIM58-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072466.1
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(62762..63044,65010..65058,66042..66062,66214..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74242..74262,74332..74337,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79571)
location: region:62762-79571:1
so has part: feature:62762-63044:1:exon
so has part: feature:65010-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69677-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74242-74262:1:exon
so has part: feature:74332-74337:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62762-63044:1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 12
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
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urn:…
SIO_000300: 25
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
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urn:…
SIO_000300: 32
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:78951-79571:1:exon

LOC115947192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115947192
product: E3 ubiquitin-protein ligase TRIM58-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072467.1
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(62762..63044,65010..65058,66042..66062,66214..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79571)
location: region:62762-79571:1
so has part: feature:62762-63044:1:exon
so has part: feature:65010-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
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so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
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so has part: feature:76269-76289:1:exon
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so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62762-63044:1:exon

urn:…
SIO_000300: 2
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 19
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
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urn:…
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urn:…
SIO_000300: 28
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:78951-79571:1:exon

LOC115947192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115947192
product: E3 ubiquitin-protein ligase TRIM58-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072468.1
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(62762..63044,65010..65058,66042..66062,66214..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71360,71448..71468,72465..72485,72767..72787,73165..73278,74071..74091,74242..74262,74332..74337,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79571)
location: region:62762-79571:1
so has part: feature:62762-63044:1:exon
so has part: feature:65010-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
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so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
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so has part: feature:72767-72787:1:exon
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so has part: feature:74071-74091:1:exon
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so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62762-63044:1:exon

urn:…
SIO_000300: 2
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urn:…
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urn:…
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position:71360:1
position: 71360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:71448-71468:1:exon

position:71448:1
position: 71448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:72465-72485:1:exon

urn:…
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urn:…
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urn:…
SIO_000300: 24
SIO_000628: feature:74071-74091:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:74242-74262:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:74332-74337:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:74559-74579:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:74782-74802:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:75787-75807:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:76024-76044:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:76163-76183:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:78951-79571:1:exon

LOC115947192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115947192
product: E3 ubiquitin-protein ligase TRIM58-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072464.1
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(62762..63044,65010..65058,66042..66062,66214..66324,67425..67445,67853..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74071..74091,74242..74262,74332..74337,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79571)
location: region:62762-79571:1
so has part: feature:62762-63044:1:exon
so has part: feature:65010-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67853-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69677-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74071-74091:1:exon
so has part: feature:74242-74262:1:exon
so has part: feature:74332-74337:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62762-63044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65010-65058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66042-66062:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66214-66324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67425-67445:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67853-67873:1:exon

position:67853:1
position: 67853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:68912-68932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69244-69264:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69457-69477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69677-69697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69859-69879:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69985-70005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70154-70174:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70436-70456:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70549-70569:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:70729-70749:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:71124-71144:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71238-71258:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:71340-71468:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:72465-72485:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:72767-72787:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:73165-73278:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:74071-74091:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:74242-74262:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:74332-74337:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:74559-74579:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:74782-74802:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:75787-75807:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:76024-76044:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:76163-76183:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:78951-79571:1:exon

LOC115947192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115947192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM58-like isoform X1
translation: MMDPAGWDAELQSDVELGMLPEQGTGSLPSCSIPKLCGSLLEGCDMENGELTAEIAESLSSQLEERDRRISKLTAELGERDARIKERDRKTTRLAAEVRRLTALLGDRDSRLRKLTAELTKCDATIRIFTVELGEQHTKIGELTADIKECGRKLRKCLPVIHLELCPYGKGSAPIPALPPLFAGKQAAELEERDLIIWENEAEIRRLRELLGFPDHRSHRNRAEDDINPDPFPLAESQDSGMHGSPNELEDRDLERELEDRDRHIGEITEELAEQSTRIEELTLELETRERRIEELTAELEEYKAKARRCLQEHRKEEETMAQVTLDPSSAHPRLVLSPDHRSVRWEFHLDPPPDIPERFDSDPCVLGCESFSSGRHCWDVDVSQGQFCAVGITRASVRRKGSITFSPEQGIWALQQWGFQSRVLASPPLVLRLARVPRRIRVSLDYEGGEVKFWDVENQVPIFTFPSASFHGERLRPWFWLELGSISLR
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(65046..65058,66042..66062,66214..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74071..74091,74242..74262,74332..74337,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79459)
location: region:65046-79459:1
so has part: feature:65046-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69677-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74071-74091:1:exon
so has part: feature:74242-74262:1:exon
so has part: feature:74332-74337:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79459:1:exon

XP_033928354.1
type: Protein
SIO_000068: ncbiprotein

position:65046:1
position: 65046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79459:1
position: 79459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65046-65058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66042-66062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66214-66324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67425-67445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67850-67873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68912-68932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69244-69264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69457-69477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69677-69697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69859-69879:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69985-70005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70154-70174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70436-70456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70549-70569:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70729-70749:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71124-71144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:71238-71258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71340-71468:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:72465-72485:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:72767-72787:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:73165-73278:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:74071-74091:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:74242-74262:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:74332-74337:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:74559-74579:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:74782-74802:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:75787-75807:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:76024-76044:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:76163-76183:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:78951-79459:1:exon

LOC115947192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115947192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM58-like isoform X3
translation: MMDPAGWDAELQSDVELGMLPEQGTGSLPSCSIPKLCGSLLEGCDMENGELTAEIAESLSSQLEERDRRISKLTAELGERDARIKERDRKTTRLAAEVRRLTALLGDRDSRLRKLTAELTKCDATIRIFTVELGEQHTKIGELTADIKECGRKLRKCLPVIHLELCPYGKGSAPIPALPPLFAGKQAAELEERDLIIWENEAEIRRLRELLGFPDHRSHRNRAEDDINPDPFPLAESQDSGMHGSPNELEDRDLERELEDRDRHIGEITEELEELTLELETRERRIEELTAELEEYKAKARRCLQEHRKEEETMAQVTLDPSSAHPRLVLSPDHRSVRWEFHLDPPPDIPERFDSDPCVLGCESFSSGRHCWDVDVSQGQFCAVGITRASVRRKGSITFSPEQGIWALQQWGFQSRVLASPPLVLRLARVPRRIRVSLDYEGGEVKFWDVENQVPIFTFPSASFHGERLRPWFWLELGSISLR
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(65046..65058,66042..66062,66214..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74071..74091,74242..74262,74332..74337,74559..74579,74782..74802,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79459)
location: region:65046-79459:1
so has part: feature:65046-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69677-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74071-74091:1:exon
so has part: feature:74242-74262:1:exon
so has part: feature:74332-74337:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79459:1:exon

XP_033928356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65046-65058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66042-66062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66214-66324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67425-67445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67850-67873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68912-68932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69244-69264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69457-69477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69677-69697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69859-69879:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69985-70005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70154-70174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70436-70456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70549-70569:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70729-70749:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71124-71144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:71238-71258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71340-71468:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:72465-72485:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:72767-72787:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:73165-73278:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:74071-74091:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:74242-74262:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:74332-74337:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:74559-74579:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:74782-74802:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:76024-76044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:76163-76183:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:78951-79459:1:exon

LOC115947192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115947192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM58-like isoform X4
translation: MMDPAGWDAELQSDVELGMLPEQGTGSLPSCSIPKLCGSLLEGCDMENGELTAEIAESLSSQLEERDRRISKLTAELGERDARIKERDRKTTRLAAEVRRLTALLGDRDSRLRKLTAELTKCDATIRIFTVELGEQHTKIGELTADIKECGRKLRKCLPVIHLELCPYGKGSAPIPALPPLFAGKQAAELEERDLIIWENEAEIRRLRELLGFPDHRSHRNRAEDDINPDPFPLAESQDSGMQDRDLERELEDRDRHIGEITEELAEQSTRIEELTLELETRERRIEELTAELEEYKAKARRCLQEHRKEEETMAQVTLDPSSAHPRLVLSPDHRSVRWEFHLDPPPDIPERFDSDPCVLGCESFSSGRHCWDVDVSQGQFCAVGITRASVRRKGSITFSPEQGIWALQQWGFQSRVLASPPLVLRLARVPRRIRVSLDYEGGEVKFWDVENQVPIFTFPSASFHGERLRPWFWLELGSISLR
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(65046..65058,66042..66062,66214..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74242..74262,74332..74337,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79459)
location: region:65046-79459:1
so has part: feature:65046-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69677-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74242-74262:1:exon
so has part: feature:74332-74337:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79459:1:exon

XP_033928357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65046-65058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66042-66062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66214-66324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67425-67445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67850-67873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68912-68932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69244-69264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69457-69477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69677-69697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69859-69879:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69985-70005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70154-70174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70436-70456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70549-70569:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70729-70749:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71124-71144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:71238-71258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71340-71468:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:72465-72485:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:72767-72787:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:73165-73278:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:74242-74262:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:74332-74337:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:74559-74579:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:74782-74802:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:75787-75807:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:76024-76044:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:76163-76183:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:78951-79459:1:exon

LOC115947192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115947192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM58-like isoform X5
translation: MMDPAGWDAELQSDVELGMLPEQGTGSLPSCSIPKLCGSLLEGCDMENGELTAEIAESLSSQLEERDRRISKLTAELGERDARIKERDRKTTRLAAEVRRLTALLGDRDSRLRKLTAELTKCDATIRIFTVELGEQHTKIGELTADIKECGRKLRKCLPVIHLELCPYGKGSAPIPALPPLFAGKQAAELEERDLIIWENEAEIRRLRELLGFPDHRSHRNRAEDDINPDPFPLAESQDSGMQDRDRHIGEITEELAEQSTRIEELTLELETRERRIEELTAELEEYKAKARRCLQEHRKEEETMAQVTLDPSSAHPRLVLSPDHRSVRWEFHLDPPPDIPERFDSDPCVLGCESFSSGRHCWDVDVSQGQFCAVGITRASVRRKGSITFSPEQGIWALQQWGFQSRVLASPPLVLRLARVPRRIRVSLDYEGGEVKFWDVENQVPIFTFPSASFHGERLRPWFWLELGSISLR
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(65046..65058,66042..66062,66214..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79459)
location: region:65046-79459:1
so has part: feature:65046-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69677-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79459:1:exon

XP_033928358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65046-65058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66042-66062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66214-66324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67425-67445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67850-67873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68912-68932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69244-69264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69457-69477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69677-69697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69859-69879:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69985-70005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70154-70174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70436-70456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70549-70569:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70729-70749:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71124-71144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:71238-71258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71340-71468:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:72465-72485:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:72767-72787:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:73165-73278:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:74559-74579:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:74782-74802:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:75787-75807:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:76024-76044:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:76163-76183:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:78951-79459:1:exon

LOC115947192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115947192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM58-like isoform X6
translation: MMDPAGWDAELQSDVELGMLPEQGTGSLPSCSIPKLCGSLLEGCDMENGELTAEIAESLSSQLEERDRRISKLTAELGERDARIKERDRKTTRLAAEVRRLTALLGDRDSRLRKLTAELTKCDATIRIFTVELGEQHTKIGELTADIKECGRKLRKQAAELEERDLIIWENEAEIRRLRELLGFPDHRSHRNRAEDDINPDPFPLAESQDSGMHGSPNELEDRDLERELEDRDRHIGEITEELAEQSTRIEELTLELETRERRIEELTAELEEYKAKARRCLQEHRKEEETMAQVTLDPSSAHPRLVLSPDHRSVRWEFHLDPPPDIPERFDSDPCVLGCESFSSGRHCWDVDVSQGQFCAVGITRASVRRKGSITFSPEQGIWALQQWGFQSRVLASPPLVLRLARVPRRIRVSLDYEGGEVKFWDVENQVPIFTFPSASFHGERLRPWFWLELGSISLR
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(65046..65058,66042..66062,66214..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71360,71448..71468,72465..72485,72767..72787,73165..73278,74071..74091,74242..74262,74332..74337,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79459)
location: region:65046-79459:1
so has part: feature:65046-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69677-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71360:1:exon
so has part: feature:71448-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74071-74091:1:exon
so has part: feature:74242-74262:1:exon
so has part: feature:74332-74337:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79459:1:exon

XP_033928359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65046-65058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66042-66062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66214-66324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67425-67445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67850-67873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68912-68932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69244-69264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69457-69477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69677-69697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69859-69879:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69985-70005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70154-70174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70436-70456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70549-70569:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70729-70749:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71124-71144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:71238-71258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71340-71360:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:71448-71468:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:72465-72485:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:72767-72787:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:73165-73278:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:74071-74091:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:74242-74262:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:74332-74337:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:74559-74579:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:74782-74802:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:75787-75807:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:76024-76044:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:76163-76183:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:78951-79459:1:exon

LOC115947192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115947192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM58-like isoform X2
translation: MMDPAGWDAELQSDVELGMLPEQGTGSLPSCSIPKLCGSLLEGCDMENGELTAEIESLSSQLEERDRRISKLTAELGERDARIKERDRKTTRLAAEVRRLTALLGDRDSRLRKLTAELTKCDATIRIFTVELGEQHTKIGELTADIKECGRKLRKCLPVIHLELCPYGKGSAPIPALPPLFAGKQAAELEERDLIIWENEAEIRRLRELLGFPDHRSHRNRAEDDINPDPFPLAESQDSGMHGSPNELEDRDLERELEDRDRHIGEITEELAEQSTRIEELTLELETRERRIEELTAELEEYKAKARRCLQEHRKEEETMAQVTLDPSSAHPRLVLSPDHRSVRWEFHLDPPPDIPERFDSDPCVLGCESFSSGRHCWDVDVSQGQFCAVGITRASVRRKGSITFSPEQGIWALQQWGFQSRVLASPPLVLRLARVPRRIRVSLDYEGGEVKFWDVENQVPIFTFPSASFHGERLRPWFWLELGSISLR
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(65046..65058,66042..66062,66214..66324,67425..67445,67853..67873,68912..68932,69244..69264,69457..69477,69677..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74071..74091,74242..74262,74332..74337,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79459)
location: region:65046-79459:1
so has part: feature:65046-65058:1:exon
so has part: feature:66042-66062:1:exon
so has part: feature:66214-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67853-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69677-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74071-74091:1:exon
so has part: feature:74242-74262:1:exon
so has part: feature:74332-74337:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79459:1:exon

XP_033928355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65046-65058:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66042-66062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66214-66324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67425-67445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67853-67873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:68912-68932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69244-69264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69457-69477:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69677-69697:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69859-69879:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69985-70005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70154-70174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70436-70456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:70549-70569:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:70729-70749:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71124-71144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:71238-71258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71340-71468:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:72465-72485:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:72767-72787:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:73165-73278:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:74071-74091:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:74242-74262:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:74332-74337:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:74559-74579:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:74782-74802:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:75787-75807:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:76024-76044:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:76163-76183:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:78951-79459:1:exon

LOC115947192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115947192
product: E3 ubiquitin-protein ligase TRIM58-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072469.1
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(66287..66324,67425..67445,67850..67873,68912..68932,69244..69264,69457..69477,69679..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74071..74091,74242..74262,74332..74337,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79571)
location: region:66287-79571:1
so has part: feature:66287-66324:1:exon
so has part: feature:67425-67445:1:exon
so has part: feature:67850-67873:1:exon
so has part: feature:68912-68932:1:exon
so has part: feature:69244-69264:1:exon
so has part: feature:69457-69477:1:exon
so has part: feature:69679-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74071-74091:1:exon
so has part: feature:74242-74262:1:exon
so has part: feature:74332-74337:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79571:1:exon

position:66287:1
position: 66287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66287-66324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67425-67445:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67850-67873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68912-68932:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69244-69264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69457-69477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69679-69697:1:exon

position:69679:1
position: 69679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:69859-69879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69985-70005:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70154-70174:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70436-70456:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70549-70569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:70729-70749:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:71124-71144:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:71238-71258:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71340-71468:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72465-72485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72767-72787:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:73165-73278:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74071-74091:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:74242-74262:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:74332-74337:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:74559-74579:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:74782-74802:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:75787-75807:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:76024-76044:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:76163-76183:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:78951-79571:1:exon

LOC115947192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115947192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM58-like isoform X7
translation: MPGSERDRKTTRLAAEVRRLTALLGDRDSRLRKLTAELTKCDATIRIFTVELGEQHTKIGELTADIKECGRKLRKCLPVIHLELCPYGKGSAPIPALPPLFAGKQAAELEERDLIIWENEAEIRRLRELLGFPDHRSHRNRAEDDINPDPFPLAESQDSGMHGSPNELEDRDLERELEDRDRHIGEITEELAEQSTRIEELTLELETRERRIEELTAELEEYKAKARRCLQEHRKEEETMAQVTLDPSSAHPRLVLSPDHRSVRWEFHLDPPPDIPERFDSDPCVLGCESFSSGRHCWDVDVSQGQFCAVGITRASVRRKGSITFSPEQGIWALQQWGFQSRVLASPPLVLRLARVPRRIRVSLDYEGGEVKFWDVENQVPIFTFPSASFHGERLRPWFWLELGSISLR
SIO_010081: LOC115947192
subclass of: SO_0000673
so part of: LOC115947192
location: join(69466..69477,69679..69697,69859..69879,69985..70005,70154..70174,70436..70456,70549..70569,70729..70749,71124..71144,71238..71258,71340..71468,72465..72485,72767..72787,73165..73278,74071..74091,74242..74262,74332..74337,74559..74579,74782..74802,75787..75807,76024..76044,76163..76183,76269..76289,76651..76671,76815..76835,77040..77060,78951..79459)
location: region:69466-79459:1
so has part: feature:69466-69477:1:exon
so has part: feature:69679-69697:1:exon
so has part: feature:69859-69879:1:exon
so has part: feature:69985-70005:1:exon
so has part: feature:70154-70174:1:exon
so has part: feature:70436-70456:1:exon
so has part: feature:70549-70569:1:exon
so has part: feature:70729-70749:1:exon
so has part: feature:71124-71144:1:exon
so has part: feature:71238-71258:1:exon
so has part: feature:71340-71468:1:exon
so has part: feature:72465-72485:1:exon
so has part: feature:72767-72787:1:exon
so has part: feature:73165-73278:1:exon
so has part: feature:74071-74091:1:exon
so has part: feature:74242-74262:1:exon
so has part: feature:74332-74337:1:exon
so has part: feature:74559-74579:1:exon
so has part: feature:74782-74802:1:exon
so has part: feature:75787-75807:1:exon
so has part: feature:76024-76044:1:exon
so has part: feature:76163-76183:1:exon
so has part: feature:76269-76289:1:exon
so has part: feature:76651-76671:1:exon
so has part: feature:76815-76835:1:exon
so has part: feature:77040-77060:1:exon
so has part: feature:78951-79459:1:exon

XP_033928360.1
type: Protein
SIO_000068: ncbiprotein

position:69466:1
position: 69466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69466-69477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69679-69697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69859-69879:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69985-70005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70154-70174:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70436-70456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:70549-70569:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:70729-70749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:71124-71144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:71238-71258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:71340-71468:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:72465-72485:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:72767-72787:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73165-73278:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:74071-74091:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74242-74262:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:74332-74337:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:74559-74579:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:74782-74802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75787-75807:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:76024-76044:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:76163-76183:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:76269-76289:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:76651-76671:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:76815-76835:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:77040-77060:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:78951-79459:1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(81035..81116)
location: region:81035-81116:-1
so has part: feature:81035-81116:-1:exon
subclass of: SO_0000663

117437830
type: Gene
SIO_000068: ncbigene

position:81035:-1
position: 81035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81116:-1
position: 81116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81035-81116:-1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(81080..81082),aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: complement(81035..81116)
location: region:81035-81116:-1
so has part: feature:81035-81116:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81035-81116:-1:exon

LOC117437803
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437803
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(81081..90499)
location: region:81081-90499:-1
so has part: feature:81081-90499:-1:exon
subclass of: SO_0000010

117437803
type: Gene
SIO_000068: ncbigene

position:81081:-1
position: 81081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90499:-1
position: 90499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81081-90499:-1:exon

LOC117437803
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437803
product: zinc finger protein interacting with ribonucleoprotein K-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072435.1
SIO_010081: LOC117437803
subclass of: SO_0000673
so part of: LOC117437803
location: complement(join(81081..81141,83280..84129,85369..85515,89008..89083,90431..90499))
location: region:81081-90499:-1
so has part: feature:90431-90499:-1:exon
so has part: feature:89008-89083:-1:exon
so has part: feature:85369-85515:-1:exon
so has part: feature:83280-84129:-1:exon
so has part: feature:81081-81141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90431-90499:-1:exon

position:90431:-1
position: 90431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89008-89083:-1:exon

position:89008:-1
position: 89008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89083:-1
position: 89083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85369-85515:-1:exon

position:85369:-1
position: 85369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85515:-1
position: 85515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83280-84129:-1:exon

position:83280:-1
position: 83280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84129:-1
position: 84129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81081-81141:-1:exon

position:81141:-1
position: 81141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437803
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437803
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein interacting with ribonucleoprotein K-like
translation: MLLPAPCFHMGLIHRDEVPGSEGVPEALQEVTIPSAEQPDPSCGPPPIGQDAWIPDIPSSEEEEERGRPLLMLWSRSRKQWKSCWDAGSSPGSIPSSDDGRRSSPPSIPSHVPPSMTPSGPHPPLNHRLHRNHPPHGTIPPSHHHCGTCGKTFSRGSSLRRHQRLHVNQQPLSCPICGRSFGSSLLLREHRQSRCRRRRHRCPTCGKRLATPRSLRRHRRRHGLAFPCSQCGKALSSRASLVAHQRMHTGERPFPCPDCGKGFAARAALNKHRKRHQDGAAFTCPDCGKRLMSKATLLEHRRLHTGERPFECLECGKSFAGSKSLSKHRKAHAERRLQALPTGAAVMAHTQSLQLCPHCGKGFRDRTGLNRHQLVHTGHRGRSPIVPYGGSVAERSKALD
SIO_010081: LOC117437803
subclass of: SO_0000673
so part of: LOC117437803
location: complement(join(81081..81141,83280..84129,85369..85515,89008..89083,90431..90499))
location: region:81081-90499:-1
so has part: feature:90431-90499:-1:exon
so has part: feature:89008-89083:-1:exon
so has part: feature:85369-85515:-1:exon
so has part: feature:83280-84129:-1:exon
so has part: feature:81081-81141:-1:exon

XP_033928326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90431-90499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89008-89083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85369-85515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83280-84129:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81081-81141:-1:exon

LOC117437814
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437814
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(94401..97712)
location: region:94401-97712:-1
so has part: feature:94401-97712:-1:exon
subclass of: SO_0000011

117437814
type: Gene
SIO_000068: ncbigene

position:94401:-1
position: 94401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97712:-1
position: 97712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94401-97712:-1:exon

LOC117437814
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437814
product: uncharacterized LOC117437814
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550513.1
SIO_010081: LOC117437814
subclass of: SO_0000673
so part of: LOC117437814
location: complement(join(94401..95027,96119..96201,97600..97712))
location: region:94401-97712:-1
so has part: feature:97600-97712:-1:exon
so has part: feature:96119-96201:-1:exon
so has part: feature:94401-95027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97600-97712:-1:exon

position:97600:-1
position: 97600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96119-96201:-1:exon

position:96119:-1
position: 96119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96201:-1
position: 96201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94401-95027:-1:exon

position:95027:-1
position: 95027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437816
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 126339..188985
location: region:126339-188985:1
so has part: feature:126339-188985:1:exon
subclass of: SO_0000010

117437816
type: Gene
SIO_000068: ncbigene

position:126339:1
position: 126339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188985:1
position: 188985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126339-188985:1:exon

LOC117437816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437816
product: valine--tRNA ligase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072460.1
SIO_010081: LOC117437816
subclass of: SO_0000673
so part of: LOC117437816
location: join(126339..126446,128002..128080,128822..128922,135085..135212,141221..141385,142389..142470,146256..146375,149728..149836,150575..150669,152248..152338,154268..154392,155340..155443,156703..156861,159562..159652,165498..165603,166797..166867,168011..168136,169493..169597,173549..173617,174047..174125,175465..175590,177883..178034,178759..178867,180144..180382,181428..181539,185698..185882,186891..187040,188899..188985)
location: region:126339-188985:1
so has part: feature:126339-126446:1:exon
so has part: feature:128002-128080:1:exon
so has part: feature:128822-128922:1:exon
so has part: feature:135085-135212:1:exon
so has part: feature:141221-141385:1:exon
so has part: feature:142389-142470:1:exon
so has part: feature:146256-146375:1:exon
so has part: feature:149728-149836:1:exon
so has part: feature:150575-150669:1:exon
so has part: feature:152248-152338:1:exon
so has part: feature:154268-154392:1:exon
so has part: feature:155340-155443:1:exon
so has part: feature:156703-156861:1:exon
so has part: feature:159562-159652:1:exon
so has part: feature:165498-165603:1:exon
so has part: feature:166797-166867:1:exon
so has part: feature:168011-168136:1:exon
so has part: feature:169493-169597:1:exon
so has part: feature:173549-173617:1:exon
so has part: feature:174047-174125:1:exon
so has part: feature:175465-175590:1:exon
so has part: feature:177883-178034:1:exon
so has part: feature:178759-178867:1:exon
so has part: feature:180144-180382:1:exon
so has part: feature:181428-181539:1:exon
so has part: feature:185698-185882:1:exon
so has part: feature:186891-187040:1:exon
so has part: feature:188899-188985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126339-126446:1:exon

position:126446:1
position: 126446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128002-128080:1:exon

position:128002:1
position: 128002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128080:1
position: 128080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128822-128922:1:exon

position:128822:1
position: 128822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128922:1
position: 128922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135085-135212:1:exon

position:135085:1
position: 135085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135212:1
position: 135212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:141221-141385:1:exon

position:141221:1
position: 141221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141385:1
position: 141385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:142389-142470:1:exon

position:142389:1
position: 142389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142470:1
position: 142470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:146256-146375:1:exon

position:146256:1
position: 146256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146375:1
position: 146375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:149728-149836:1:exon

position:149728:1
position: 149728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149836:1
position: 149836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:150575-150669:1:exon

position:150575:1
position: 150575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150669:1
position: 150669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:152248-152338:1:exon

position:152248:1
position: 152248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152338:1
position: 152338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:154268-154392:1:exon

position:154268:1
position: 154268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154392:1
position: 154392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:155340-155443:1:exon

position:155340:1
position: 155340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155443:1
position: 155443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:156703-156861:1:exon

position:156703:1
position: 156703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156861:1
position: 156861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:159562-159652:1:exon

position:159562:1
position: 159562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159652:1
position: 159652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:165498-165603:1:exon

position:165498:1
position: 165498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165603:1
position: 165603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:166797-166867:1:exon

position:166797:1
position: 166797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166867:1
position: 166867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:168011-168136:1:exon

position:168011:1
position: 168011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168136:1
position: 168136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:169493-169597:1:exon

position:169493:1
position: 169493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169597:1
position: 169597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:173549-173617:1:exon

position:173549:1
position: 173549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173617:1
position: 173617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:174047-174125:1:exon

position:174047:1
position: 174047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174125:1
position: 174125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:175465-175590:1:exon

position:175465:1
position: 175465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175590:1
position: 175590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:177883-178034:1:exon

position:177883:1
position: 177883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178034:1
position: 178034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:178759-178867:1:exon

position:178759:1
position: 178759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178867:1
position: 178867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:180144-180382:1:exon

position:180144:1
position: 180144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180382:1
position: 180382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:181428-181539:1:exon

position:181428:1
position: 181428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181539:1
position: 181539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:185698-185882:1:exon

position:185698:1
position: 185698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185882:1
position: 185882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:186891-187040:1:exon

position:186891:1
position: 186891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187040:1
position: 187040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:188899-188985:1:exon

position:188899:1
position: 188899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: valine--tRNA ligase-like
translation: MKEKQAPPTRRQRRPPGVVTYDLETPPGQKKDVSVPLPPSYSPRYVEASWYSWWEQQGFFKPEYGRSRVSEPNPRGVFMMCVPPPNVTGVLHLGHALTSAIQDSLTRWHRMRGLTTLWNPGCDHAGIATQVVVERRLWRQQQLTRHQLGRERFLQEVWAWKQEKGDRIYQQLRQLGASMDWDRACFTMDPKMSRAVCEAFVRLHDQGLIYRSTRMVHWSCALRSAISDIEVDKRELSGRTLLRVPGYGEPVEFGVLVSFAYPLEGSGGGQEVVVATTRLETMLGDVAVAVHPEDPRYTHLRGRHVVHPFTGQRLPVLHDPFVDPQFGTGAVKVTPGHDATDFDVGQRHHLPSPCILDDEGRLQDVPPPFLGMPRFQARTAVMEALKERGLFRGVTENPMVVPICSRSQDVLEPVLRPQWFLRCSALAAAAAAVVRGGELRLRPAAHTRTWLQWMDNIRDWCISRQLWWGHRIPAYFITIDDPNIPPGKDGDGKFWVSGRTEEEAREKAAKRFHVTPERVTLRQDEDVLDTWFSSGLFPFSIFGWPEPTEDLSVFYPGSLLETGHDILFFWVARMVMLGLALTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGITLQGLHEQLENSNLEPAELERAREGQKRDFPNGIPECGTDALRFALCAYTAQGRDINLDVLRVLGYRHFCNKVWNGARFVLQTLGGSYRPPPRPGGRPGLPERWIRSRLSRAVGSVGSAMEDFDFPGATSAVHRFWVYELCDVYLECVKPVLARAAAASGTRGRGDPEAAPIGADGDALDAAADAVDAADAVDAVDALGALDAALAVQDTLHTCLDVGLRLLAPFMPFLSEELWQRLPPPAPPAPPPAPSICVCPFPEPQQYCWQDEEAEASMEFTLSIVHALRSLRSTHGITRARPPCFLQVSDPSWASLAESCTPHIRVLGGVGSVRVLGGGASPEPPPPGCAVGVASERCSVHLLLKGLVDAPKELSRLGGRRQELVRTIERLQERRGGAGYMEKVPPHVQEADAAKLAQAEAELEKVLEAEELMRKML
SIO_010081: LOC117437816
subclass of: SO_0000673
so part of: LOC117437816
location: join(126432..126446,128002..128080,128822..128922,135085..135212,141221..141385,142389..142470,146256..146375,149728..149836,150575..150669,152248..152338,154268..154392,155340..155443,156703..156861,159562..159652,165498..165603,166797..166867,168011..168136,169493..169597,173549..173617,174047..174125,175465..175590,177883..178034,178759..178867,180144..180382,181428..181539,185698..185882,186891..187040,188899..188967)
location: region:126432-188967:1
so has part: feature:126432-126446:1:exon
so has part: feature:128002-128080:1:exon
so has part: feature:128822-128922:1:exon
so has part: feature:135085-135212:1:exon
so has part: feature:141221-141385:1:exon
so has part: feature:142389-142470:1:exon
so has part: feature:146256-146375:1:exon
so has part: feature:149728-149836:1:exon
so has part: feature:150575-150669:1:exon
so has part: feature:152248-152338:1:exon
so has part: feature:154268-154392:1:exon
so has part: feature:155340-155443:1:exon
so has part: feature:156703-156861:1:exon
so has part: feature:159562-159652:1:exon
so has part: feature:165498-165603:1:exon
so has part: feature:166797-166867:1:exon
so has part: feature:168011-168136:1:exon
so has part: feature:169493-169597:1:exon
so has part: feature:173549-173617:1:exon
so has part: feature:174047-174125:1:exon
so has part: feature:175465-175590:1:exon
so has part: feature:177883-178034:1:exon
so has part: feature:178759-178867:1:exon
so has part: feature:180144-180382:1:exon
so has part: feature:181428-181539:1:exon
so has part: feature:185698-185882:1:exon
so has part: feature:186891-187040:1:exon
so has part: feature:188899-188967:1:exon

XP_033928351.1
type: Protein
SIO_000068: ncbiprotein

position:126432:1
position: 126432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188967:1
position: 188967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126432-126446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128002-128080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128822-128922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135085-135212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141221-141385:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142389-142470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146256-146375:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149728-149836:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:150575-150669:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152248-152338:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154268-154392:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155340-155443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:156703-156861:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:159562-159652:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:165498-165603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:166797-166867:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:168011-168136:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:169493-169597:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:173549-173617:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:174047-174125:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:175465-175590:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:177883-178034:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:178759-178867:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:180144-180382:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:181428-181539:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:185698-185882:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:186891-187040:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:188899-188967:1:exon

LOC117437817
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189132..221746)
location: region:189132-221746:-1
so has part: feature:189132-221746:-1:exon
subclass of: SO_0000010

117437817
type: Gene
SIO_000068: ncbigene

position:189132:-1
position: 189132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221746:-1
position: 221746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189132-221746:-1:exon

LOC117437817
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437817
product: abhydrolase domain containing 16A, phospholipase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072461.1
SIO_010081: LOC117437817
subclass of: SO_0000673
so part of: LOC117437817
location: complement(join(189132..189236,189950..189996,191317..191415,194971..195047,195688..195750,196721..196777,200374..200437,202498..202602,205487..205610,206765..206814,208205..208268,211644..211743,214071..214187,215047..215151,216115..216191,216267..216352,217204..217290,218680..218746,220285..220341,221614..221746))
location: region:189132-221746:-1
so has part: feature:221614-221746:-1:exon
so has part: feature:220285-220341:-1:exon
so has part: feature:218680-218746:-1:exon
so has part: feature:217204-217290:-1:exon
so has part: feature:216267-216352:-1:exon
so has part: feature:216115-216191:-1:exon
so has part: feature:215047-215151:-1:exon
so has part: feature:214071-214187:-1:exon
so has part: feature:211644-211743:-1:exon
so has part: feature:208205-208268:-1:exon
so has part: feature:206765-206814:-1:exon
so has part: feature:205487-205610:-1:exon
so has part: feature:202498-202602:-1:exon
so has part: feature:200374-200437:-1:exon
so has part: feature:196721-196777:-1:exon
so has part: feature:195688-195750:-1:exon
so has part: feature:194971-195047:-1:exon
so has part: feature:191317-191415:-1:exon
so has part: feature:189950-189996:-1:exon
so has part: feature:189132-189236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221614-221746:-1:exon

position:221614:-1
position: 221614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220285-220341:-1:exon

position:220285:-1
position: 220285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220341:-1
position: 220341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218680-218746:-1:exon

position:218680:-1
position: 218680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218746:-1
position: 218746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:217204-217290:-1:exon

position:217204:-1
position: 217204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217290:-1
position: 217290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216267-216352:-1:exon

position:216267:-1
position: 216267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216352:-1
position: 216352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216115-216191:-1:exon

position:216115:-1
position: 216115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216191:-1
position: 216191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:215047-215151:-1:exon

position:215047:-1
position: 215047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215151:-1
position: 215151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:214071-214187:-1:exon

position:214071:-1
position: 214071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214187:-1
position: 214187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:211644-211743:-1:exon

position:211644:-1
position: 211644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211743:-1
position: 211743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:208205-208268:-1:exon

position:208205:-1
position: 208205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208268:-1
position: 208268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:206765-206814:-1:exon

position:206765:-1
position: 206765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206814:-1
position: 206814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:205487-205610:-1:exon

position:205487:-1
position: 205487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205610:-1
position: 205610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:202498-202602:-1:exon

position:202498:-1
position: 202498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202602:-1
position: 202602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:200374-200437:-1:exon

position:200374:-1
position: 200374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200437:-1
position: 200437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:196721-196777:-1:exon

position:196721:-1
position: 196721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196777:-1
position: 196777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:195688-195750:-1:exon

position:195688:-1
position: 195688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195750:-1
position: 195750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:194971-195047:-1:exon

position:194971:-1
position: 194971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195047:-1
position: 195047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:191317-191415:-1:exon

position:191317:-1
position: 191317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191415:-1
position: 191415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:189950-189996:-1:exon

position:189950:-1
position: 189950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189996:-1
position: 189996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:189132-189236:-1:exon

position:189236:-1
position: 189236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437817
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine lipase ABHD16A
translation: MAKLLSCVLGPRLYRVHRTGAGGGGEGTGNSGGERSWDSYYQPRGLEKHTDSVLALASVLWSISYYASPLAVFYLYRKGLLTMSRVIPMSHCAATIVLLLAGVACLRGIGRWSNPQYVEFISVLEDSHRLGTPETKRKLAQYSFDFRSWPIDFRWDSTGAPWGGSRAVPLLRTPPRHRGSARGFLGALRKVPCRLASLVLAHTLGRRMLFPGSVRLLQKLLLPSLLQGQARLVEEVGGQRAKLLACDGNEIDAMFIDRRQRPGPHGSTLVICCEGNAGFYEVGCLCTPLEAGYSVLGWNHPGFGGSTGVPLPQSEANAMDVVVRFALQELQFPPHSIVLYAWSIGGFTATWAAMSYPELGALVLDASFDDLVPLALKVLPRSWGELVTRTVREHLNLNNAEQLCRYQGPVLLVRRTRDEIITTTVPDDIASNRGNDLLLKLLQHRYPKIMADEGTRIVREWLETATPAEERALAQRCPVDERWCLELLEAFAGDRDPQFPWSLGEELSGEERQQLALFLAQKHLQNFEASHCTPLPPQAFRLPWSL
SIO_010081: LOC117437817
subclass of: SO_0000673
so part of: LOC117437817
location: complement(join(189153..189236,189950..189996,191317..191415,194971..195047,195688..195750,196721..196777,200374..200437,202498..202602,205487..205610,206765..206814,208205..208268,211644..211743,214071..214187,215047..215151,216115..216191,216267..216352,217204..217290,218680..218746,220285..220341,221614..221724))
location: region:189153-221724:-1
so has part: feature:221614-221724:-1:exon
so has part: feature:220285-220341:-1:exon
so has part: feature:218680-218746:-1:exon
so has part: feature:217204-217290:-1:exon
so has part: feature:216267-216352:-1:exon
so has part: feature:216115-216191:-1:exon
so has part: feature:215047-215151:-1:exon
so has part: feature:214071-214187:-1:exon
so has part: feature:211644-211743:-1:exon
so has part: feature:208205-208268:-1:exon
so has part: feature:206765-206814:-1:exon
so has part: feature:205487-205610:-1:exon
so has part: feature:202498-202602:-1:exon
so has part: feature:200374-200437:-1:exon
so has part: feature:196721-196777:-1:exon
so has part: feature:195688-195750:-1:exon
so has part: feature:194971-195047:-1:exon
so has part: feature:191317-191415:-1:exon
so has part: feature:189950-189996:-1:exon
so has part: feature:189153-189236:-1:exon

XP_033928352.1
type: Protein
SIO_000068: ncbiprotein

position:189153:-1
position: 189153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221724:-1
position: 221724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221614-221724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220285-220341:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218680-218746:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217204-217290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216267-216352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216115-216191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215047-215151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214071-214187:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211644-211743:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:208205-208268:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206765-206814:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205487-205610:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202498-202602:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:200374-200437:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:196721-196777:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:195688-195750:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:194971-195047:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:191317-191415:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:189950-189996:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:189153-189236:-1:exon

LOC117437815
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(226891..235414)
location: region:226891-235414:-1
so has part: feature:226891-235414:-1:exon
subclass of: SO_0000010

117437815
type: Gene
SIO_000068: ncbigene

position:226891:-1
position: 226891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235414:-1
position: 235414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226891-235414:-1:exon

LOC117437815
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437815
product: coiled-coil alpha-helical rod protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072459.1
SIO_010081: LOC117437815
subclass of: SO_0000673
so part of: LOC117437815
location: complement(join(226891..227156,228221..228264,228368..228414,229170..229282,230051..230136,230875..230985,233146..233283,233881..233964,235387..235414))
location: region:226891-235414:-1
so has part: feature:235387-235414:-1:exon
so has part: feature:233881-233964:-1:exon
so has part: feature:233146-233283:-1:exon
so has part: feature:230875-230985:-1:exon
so has part: feature:230051-230136:-1:exon
so has part: feature:229170-229282:-1:exon
so has part: feature:228368-228414:-1:exon
so has part: feature:228221-228264:-1:exon
so has part: feature:226891-227156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235387-235414:-1:exon

position:235387:-1
position: 235387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:233881-233964:-1:exon

position:233881:-1
position: 233881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233964:-1
position: 233964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233146-233283:-1:exon

position:233146:-1
position: 233146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233283:-1
position: 233283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:230875-230985:-1:exon

position:230875:-1
position: 230875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230985:-1
position: 230985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:230051-230136:-1:exon

position:230051:-1
position: 230051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230136:-1
position: 230136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:229170-229282:-1:exon

position:229170:-1
position: 229170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229282:-1
position: 229282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:228368-228414:-1:exon

position:228368:-1
position: 228368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228414:-1
position: 228414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:228221-228264:-1:exon

position:228221:-1
position: 228221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228264:-1
position: 228264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:226891-227156:-1:exon

position:227156:-1
position: 227156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil alpha-helical rod protein 1-like
translation: MGHILALQEKELSQELPPPGLPLSLPPPHLLQLLGRWRLKVFELLVQLQVQEELQRLLSTQVSTLGAVVAAGTRRVTRLELRLQERMERAEEQRQERQRLEQELIQHRGRAEAAEEALGELAQAAARLTRVAAAHEAAVAAATRTMDTLSTRLRRAGHRLRVLQALVSPVVALEQVTPDEAPPREDRMSPPPQQSCPGLPGDAATGSGCLHPWGPPLTR
SIO_010081: LOC117437815
subclass of: SO_0000673
so part of: LOC117437815
location: complement(join(227081..227156,228221..228264,228368..228414,229170..229282,230051..230136,230875..230985,233146..233283,233881..233925))
location: region:227081-233925:-1
so has part: feature:233881-233925:-1:exon
so has part: feature:233146-233283:-1:exon
so has part: feature:230875-230985:-1:exon
so has part: feature:230051-230136:-1:exon
so has part: feature:229170-229282:-1:exon
so has part: feature:228368-228414:-1:exon
so has part: feature:228221-228264:-1:exon
so has part: feature:227081-227156:-1:exon

XP_033928350.1
type: Protein
SIO_000068: ncbiprotein

position:227081:-1
position: 227081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233925:-1
position: 233925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233881-233925:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233146-233283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230875-230985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230051-230136:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229170-229282:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228368-228414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228221-228264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227081-227156:-1:exon

LOC117437804
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<238758..247806)
location: region:238758-247806:-1
so has part: feature:238758-247806:-1:exon
subclass of: SO_0000010

117437804
type: Gene
SIO_000068: ncbigene

position:238758:-1
position: 238758
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:247806:-1
position: 247806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238758-247806:-1:exon

LOC117437804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437804
product: mediator of DNA damage checkpoint 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072436.1
SIO_010081: LOC117437804
subclass of: SO_0000673
so part of: LOC117437804
location: complement(join(<238758..238928,239662..239772,241127..241252,244117..244302,246142..246219,246318..246536,246644..246759,246944..246997,247095..247806))
location: region:238758-247806:-1
so has part: feature:247095-247806:-1:exon
so has part: feature:246944-246997:-1:exon
so has part: feature:246644-246759:-1:exon
so has part: feature:246318-246536:-1:exon
so has part: feature:246142-246219:-1:exon
so has part: feature:244117-244302:-1:exon
so has part: feature:241127-241252:-1:exon
so has part: feature:239662-239772:-1:exon
so has part: feature:238758-238928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247095-247806:-1:exon

position:247095:-1
position: 247095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246944-246997:-1:exon

position:246944:-1
position: 246944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246997:-1
position: 246997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246644-246759:-1:exon

position:246644:-1
position: 246644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246759:-1
position: 246759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:246318-246536:-1:exon

position:246318:-1
position: 246318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246536:-1
position: 246536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:246142-246219:-1:exon

position:246142:-1
position: 246142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246219:-1
position: 246219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244117-244302:-1:exon

position:244117:-1
position: 244117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244302:-1
position: 244302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:241127-241252:-1:exon

position:241127:-1
position: 241127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241252:-1
position: 241252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:239662-239772:-1:exon

position:239662:-1
position: 239662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239772:-1
position: 239772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:238758-238928:-1:exon

position:238928:-1
position: 238928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of DNA damage checkpoint protein 1
translation: MGMILNGDDGSTDPDVETPSPDTRSPSPDVVAPYPDVVAPSPDVVTPNPDAVTPNPDVVTPDPDAVTSNPDVVAPSPDVRASDPDVPAPNPDVGAPNPDVVAPNPDVKAPNPDVEAPNPDVETPNPDVGAPDPDVGAPDPDVKAPNPDVGTPNPDVGTPNPDVKAPNPDVKAPNPDDKAPNADVGAPNPDVGPQEHNGETLAPIPAVPMDSSTPKSQHLDPCSAVTSDANGIESDSDDVDLFLEPTQSFLPAADKGSPQVWDPEEPTQLFCPPQEEDKDPPQPPPPPKEGTKEEGRSQRRAKSRGGGAKGGVASEEVAVGVASVGPAPLRRSPRLLARPVAEPTPPPPPAKPRPRRAGTGQSRKRAQDKEEEPIEVEAPKLRPRRSVGSSPPKVLFTGLVASEAMELALLSLGGSVASSVLDCTHLVTDRVRRTIKFLCALGRGVPIVTPLWIQKSASTGRILPPGPFLVQDPQQEQHFGFSLAQALQRARRQPLLRGYEIHVTPSVRPEPEHMKDIITCSGGTFLPTMPSTYRPRRVVVSCPADSWCWTPALSSHLPLASVELVLTGLLRQRLQLQPYLLPPPPQDPPQD
SIO_010081: LOC117437804
subclass of: SO_0000673
so part of: LOC117437804
location: complement(join(<238758..238928,239662..239772,241127..241252,244117..244302,246142..246219,246318..246536,246644..246759,246944..246997,247095..247806))
location: region:238758-247806:-1
so has part: feature:247095-247806:-1:exon
so has part: feature:246944-246997:-1:exon
so has part: feature:246644-246759:-1:exon
so has part: feature:246318-246536:-1:exon
so has part: feature:246142-246219:-1:exon
so has part: feature:244117-244302:-1:exon
so has part: feature:241127-241252:-1:exon
so has part: feature:239662-239772:-1:exon
so has part: feature:238758-238928:-1:exon

XP_033928327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247095-247806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:246944-246997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246644-246759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246318-246536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246142-246219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244117-244302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241127-241252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:239662-239772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:238758-238928:-1:exon

LOC101877088
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101877088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 249791..256874
location: region:249791-256874:1
so has part: feature:249791-256874:1:exon
subclass of: SO_0000010

101877088
type: Gene
SIO_000068: ncbigene

position:249791:1
position: 249791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256874:1
position: 256874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249791-256874:1:exon

LOC101877088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101877088
product: tubulin beta class I
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 184 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072438.1
SIO_010081: LOC101877088
subclass of: SO_0000673
so part of: LOC101877088
location: join(249791..249978,252762..252870,254061..254171,255027..256874)
location: region:249791-256874:1
so has part: feature:249791-249978:1:exon
so has part: feature:252762-252870:1:exon
so has part: feature:254061-254171:1:exon
so has part: feature:255027-256874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249791-249978:1:exon

position:249978:1
position: 249978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252762-252870:1:exon

position:252762:1
position: 252762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252870:1
position: 252870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254061-254171:1:exon

position:254061:1
position: 254061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254171:1
position: 254171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255027-256874:1:exon

position:255027:1
position: 255027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101877088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101877088
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: tubulin beta chain
translation: MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA
SIO_010081: LOC101877088
subclass of: SO_0000673
so part of: LOC101877088
location: join(249922..249978,252762..252870,254061..254171,255027..256085)
location: region:249922-256085:1
so has part: feature:249922-249978:1:exon
so has part: feature:252762-252870:1:exon
so has part: feature:254061-254171:1:exon
so has part: feature:255027-256085:1:exon

XP_033928329.1
type: Protein
SIO_000068: ncbiprotein

position:249922:1
position: 249922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256085:1
position: 256085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249922-249978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252762-252870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254061-254171:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255027-256085:1:exon

LOC117437807
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(257397..266832)
location: region:257397-266832:-1
so has part: feature:257397-266832:-1:exon
subclass of: SO_0000010

117437807
type: Gene
SIO_000068: ncbigene

position:257397:-1
position: 257397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266832:-1
position: 266832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257397-266832:-1:exon

LOC117437807
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437807
product: flotillin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072448.1
SIO_010081: LOC117437807
subclass of: SO_0000673
so part of: LOC117437807
location: complement(join(257397..257657,258836..258913,258988..259152,260348..260485,260569..260614,261181..261362,262242..262394,262474..262569,263393..263512,263661..263911))
location: region:257397-263911:-1
so has part: feature:263661-263911:-1:exon
so has part: feature:263393-263512:-1:exon
so has part: feature:262474-262569:-1:exon
so has part: feature:262242-262394:-1:exon
so has part: feature:261181-261362:-1:exon
so has part: feature:260569-260614:-1:exon
so has part: feature:260348-260485:-1:exon
so has part: feature:258988-259152:-1:exon
so has part: feature:258836-258913:-1:exon
so has part: feature:257397-257657:-1:exon

position:263911:-1
position: 263911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263661-263911:-1:exon

position:263661:-1
position: 263661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263393-263512:-1:exon

position:263393:-1
position: 263393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263512:-1
position: 263512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:262474-262569:-1:exon

position:262474:-1
position: 262474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262569:-1
position: 262569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:262242-262394:-1:exon

position:262242:-1
position: 262242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262394:-1
position: 262394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:261181-261362:-1:exon

position:261181:-1
position: 261181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261362:-1
position: 261362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:260569-260614:-1:exon

position:260569:-1
position: 260569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260614:-1
position: 260614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:260348-260485:-1:exon

position:260348:-1
position: 260348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260485:-1
position: 260485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:258988-259152:-1:exon

position:258988:-1
position: 258988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259152:-1
position: 259152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:258836-258913:-1:exon

position:258836:-1
position: 258836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258913:-1
position: 258913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:257397-257657:-1:exon

position:257657:-1
position: 257657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437807
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437807
product: flotillin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072449.1
SIO_010081: LOC117437807
subclass of: SO_0000673
so part of: LOC117437807
location: complement(join(258830..258913,258988..259152,260348..260485,260569..260614,261181..261362,262242..262394,262474..262569,263393..263512,263661..263804,264165..264255,266519..266594,266723..266832))
location: region:258830-266832:-1
so has part: feature:266723-266832:-1:exon
so has part: feature:266519-266594:-1:exon
so has part: feature:264165-264255:-1:exon
so has part: feature:263661-263804:-1:exon
so has part: feature:263393-263512:-1:exon
so has part: feature:262474-262569:-1:exon
so has part: feature:262242-262394:-1:exon
so has part: feature:261181-261362:-1:exon
so has part: feature:260569-260614:-1:exon
so has part: feature:260348-260485:-1:exon
so has part: feature:258988-259152:-1:exon
so has part: feature:258830-258913:-1:exon

position:258830:-1
position: 258830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266723-266832:-1:exon

position:266723:-1
position: 266723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266519-266594:-1:exon

position:266519:-1
position: 266519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266594:-1
position: 266594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:264165-264255:-1:exon

position:264165:-1
position: 264165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264255:-1
position: 264255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:263661-263804:-1:exon

position:263804:-1
position: 263804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:263393-263512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262474-262569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262242-262394:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:261181-261362:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260569-260614:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260348-260485:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258988-259152:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:258830-258913:-1:exon

LOC117437807
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: flotillin-1 isoform X2
translation: MFFTCGPNEAMVVSGFCRSPPVMVAGGRVLVVPCLQQIQRISLNTLTLNVRSEKVYTRHGVPISVTGIAQVKIQGQNKEMLAAACQMFLGKSEAEIAQIALETLEGHQRAIMAHMTVEEIYKDRQKFSEQVFNVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKGRTAQVQRDARVGEAEAKRDAGIREARARQEQVSAQLLSEAAMARAQRDFELQQAQCDAAVSARKATADLAYELQVAKTKQQIEEQRAQVLVVERAQRAQLQEHEIGRRELELEATVRKPAEAERYRLERLAEAQRSQLILQAEAEAEAMRVTGAAKAAAVAARARAEAAQAAAKAEAFGQYQDAAVVEMVLQRLPQAAEAVAQPLLGTRRVTLVAGATGAVGVSRLPGEVLDVVTRLPSAIEALTGVSITQGSQKKSECQG
SIO_010081: LOC117437807
subclass of: SO_0000673
so part of: LOC117437807
location: complement(join(258881..258913,258988..259152,260348..260485,260569..260614,261181..261362,262242..262394,262474..262569,263393..263512,263661..263804,264165..264255,266519..266594,266723..266765))
location: region:258881-266765:-1
so has part: feature:266723-266765:-1:exon
so has part: feature:266519-266594:-1:exon
so has part: feature:264165-264255:-1:exon
so has part: feature:263661-263804:-1:exon
so has part: feature:263393-263512:-1:exon
so has part: feature:262474-262569:-1:exon
so has part: feature:262242-262394:-1:exon
so has part: feature:261181-261362:-1:exon
so has part: feature:260569-260614:-1:exon
so has part: feature:260348-260485:-1:exon
so has part: feature:258988-259152:-1:exon
so has part: feature:258881-258913:-1:exon

XP_033928340.1
type: Protein
SIO_000068: ncbiprotein

position:258881:-1
position: 258881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266765:-1
position: 266765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266723-266765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266519-266594:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264165-264255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263661-263804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263393-263512:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262474-262569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262242-262394:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:261181-261362:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260569-260614:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260348-260485:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258988-259152:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:258881-258913:-1:exon

LOC117437807
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437807
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: flotillin-1 isoform X1
translation: MRLNGSCWEQVKIQGQNKEMLAAACQMFLGKSEAEIAQIALETLEGHQRAIMAHMTVEEIYKDRQKFSEQVFNVASSDLVNMGISVVSYTLKDIHDDQDYLHSLGKGRTAQVQRDARVGEAEAKRDAGIREARARQEQVSAQLLSEAAMARAQRDFELQQAQCDAAVSARKATADLAYELQVAKTKQQIEEQRAQVLVVERAQRAQLQEHEIGRRELELEATVRKPAEAERYRLERLAEAQRSQLILQAEAEAEAMRVTGAAKAAAVAARARAEAAQAAAKAEAFGQYQDAAVVEMVLQRLPQAAEAVAQPLLGTRRVTLVAGATGAVGVSRLPGEVLDVVTRLPSAIEALTGVSITQGSQKKSECQG
SIO_010081: LOC117437807
subclass of: SO_0000673
so part of: LOC117437807
location: complement(join(258881..258913,258988..259152,260348..260485,260569..260614,261181..261362,262242..262394,262474..262569,263393..263512,263661..263834))
location: region:258881-263834:-1
so has part: feature:263661-263834:-1:exon
so has part: feature:263393-263512:-1:exon
so has part: feature:262474-262569:-1:exon
so has part: feature:262242-262394:-1:exon
so has part: feature:261181-261362:-1:exon
so has part: feature:260569-260614:-1:exon
so has part: feature:260348-260485:-1:exon
so has part: feature:258988-259152:-1:exon
so has part: feature:258881-258913:-1:exon

XP_033928339.1
type: Protein
SIO_000068: ncbiprotein

position:263834:-1
position: 263834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263661-263834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263393-263512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262474-262569:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262242-262394:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261181-261362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260569-260614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260348-260485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:258988-259152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258881-258913:-1:exon

LOC117437808
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437808
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 266933..271129
location: region:266933-271129:1
so has part: feature:266933-271129:1:exon
subclass of: SO_0000011

117437808
type: Gene
SIO_000068: ncbigene

position:266933:1
position: 266933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271129:1
position: 271129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266933-271129:1:exon

LOC117437808
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437808
product: uncharacterized LOC117437808, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550505.1
SIO_010081: LOC117437808
subclass of: SO_0000673
so part of: LOC117437808
location: join(266933..267037,267281..267383,268770..269005,269257..269565)
location: region:266933-269565:1
so has part: feature:266933-267037:1:exon
so has part: feature:267281-267383:1:exon
so has part: feature:268770-269005:1:exon
so has part: feature:269257-269565:1:exon

position:269565:1
position: 269565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266933-267037:1:exon

position:267037:1
position: 267037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:267281-267383:1:exon

position:267281:1
position: 267281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267383:1
position: 267383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268770-269005:1:exon

position:268770:1
position: 268770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269005:1
position: 269005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269257-269565:1:exon

position:269257:1
position: 269257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437808
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437808
product: uncharacterized LOC117437808, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004550511.1
SIO_010081: LOC117437808
subclass of: SO_0000673
so part of: LOC117437808
location: join(267013..267037,267273..267383,268770..269005,269257..270191,270857..271129)
location: region:267013-271129:1
so has part: feature:267013-267037:1:exon
so has part: feature:267273-267383:1:exon
so has part: feature:268770-269005:1:exon
so has part: feature:269257-270191:1:exon
so has part: feature:270857-271129:1:exon

position:267013:1
position: 267013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267013-267037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267273-267383:1:exon

position:267273:1
position: 267273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268770-269005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269257-270191:1:exon

position:270191:1
position: 270191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270857-271129:1:exon

position:270857:1
position: 270857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437808
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437808
product: uncharacterized LOC117437808, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004550506.1
SIO_010081: LOC117437808
subclass of: SO_0000673
so part of: LOC117437808
location: join(267013..267037,267273..268082,268770..269005,269257..269565)
location: region:267013-269565:1
so has part: feature:267013-267037:1:exon
so has part: feature:267273-268082:1:exon
so has part: feature:268770-269005:1:exon
so has part: feature:269257-269565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267013-267037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267273-268082:1:exon

position:268082:1
position: 268082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268770-269005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269257-269565:1:exon

LOC117437808
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437808
product: uncharacterized LOC117437808, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004550507.1
SIO_010081: LOC117437808
subclass of: SO_0000673
so part of: LOC117437808
location: join(267013..267037,267273..267383,267757..268082,268770..269005,269257..269565)
location: region:267013-269565:1
so has part: feature:267013-267037:1:exon
so has part: feature:267273-267383:1:exon
so has part: feature:267757-268082:1:exon
so has part: feature:268770-269005:1:exon
so has part: feature:269257-269565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267013-267037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267273-267383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267757-268082:1:exon

position:267757:1
position: 267757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:268770-269005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269257-269565:1:exon

LOC117437808
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437808
product: uncharacterized LOC117437808, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004550509.1
SIO_010081: LOC117437808
subclass of: SO_0000673
so part of: LOC117437808
location: join(268206..268244,268770..269005,269257..269565)
location: region:268206-269565:1
so has part: feature:268206-268244:1:exon
so has part: feature:268770-269005:1:exon
so has part: feature:269257-269565:1:exon

position:268206:1
position: 268206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268206-268244:1:exon

position:268244:1
position: 268244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268770-269005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269257-269565:1:exon

LOC117437808
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437808
product: uncharacterized LOC117437808, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004550510.1
SIO_010081: LOC117437808
subclass of: SO_0000673
so part of: LOC117437808
location: join(268320..268344,268770..269005,269257..269565)
location: region:268320-269565:1
so has part: feature:268320-268344:1:exon
so has part: feature:268770-269005:1:exon
so has part: feature:269257-269565:1:exon

position:268320:1
position: 268320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268320-268344:1:exon

position:268344:1
position: 268344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268770-269005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269257-269565:1:exon

LOC117437808
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437808
product: uncharacterized LOC117437808, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004550508.1
SIO_010081: LOC117437808
subclass of: SO_0000673
so part of: LOC117437808
location: join(268345..268394,268770..269005,269257..269565)
location: region:268345-269565:1
so has part: feature:268345-268394:1:exon
so has part: feature:268770-269005:1:exon
so has part: feature:269257-269565:1:exon

position:268345:1
position: 268345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268345-268394:1:exon

position:268394:1
position: 268394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268770-269005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269257-269565:1:exon

LOC101869354
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101869354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(269191..272222)
location: region:269191-272222:-1
so has part: feature:269191-272222:-1:exon
subclass of: SO_0000010

101869354
type: Gene
SIO_000068: ncbigene

position:269191:-1
position: 269191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272222:-1
position: 272222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269191-272222:-1:exon

LOC101869354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869354
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072446.1
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269191..269534,269662..269722,269793..269891,269968..270243,271221..271484,271584..272222))
location: region:269191-272222:-1
so has part: feature:271584-272222:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269662-269722:-1:exon
so has part: feature:269191-269534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271584-272222:-1:exon

position:271584:-1
position: 271584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

position:271221:-1
position: 271221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271484:-1
position: 271484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:269968-270243:-1:exon

position:269968:-1
position: 269968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270243:-1
position: 270243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269793-269891:-1:exon

position:269793:-1
position: 269793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269891:-1
position: 269891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:269662-269722:-1:exon

position:269662:-1
position: 269662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269722:-1
position: 269722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:269191-269534:-1:exon

position:269534:-1
position: 269534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101869354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869354
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 297 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072443.1
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269191..269534,269662..269694,269793..269891,269968..270243,270844..271119,271221..271484,271584..272222))
location: region:269191-272222:-1
so has part: feature:271584-272222:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269662-269694:-1:exon
so has part: feature:269191-269534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271584-272222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

position:270844:-1
position: 270844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271119:-1
position: 271119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269662-269694:-1:exon

position:269694:-1
position: 269694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269191-269534:-1:exon

LOC101869354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869354
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 297 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072444.1
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269191..269353,269502..269694,269793..269891,269968..270243,270844..271119,271221..271484,271584..272222))
location: region:269191-272222:-1
so has part: feature:271584-272222:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269502-269694:-1:exon
so has part: feature:269191-269353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271584-272222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269502-269694:-1:exon

position:269502:-1
position: 269502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269191-269353:-1:exon

position:269353:-1
position: 269353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101869354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869354
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 297 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072445.1
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269191..269353,269502..269534,269662..269722,269793..269891,269968..270243,270844..271119,271221..271484,271584..272222))
location: region:269191-272222:-1
so has part: feature:271584-272222:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269662-269722:-1:exon
so has part: feature:269502-269534:-1:exon
so has part: feature:269191-269353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271584-272222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269662-269722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269502-269534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:269191-269353:-1:exon

LOC101869354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869354
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 298 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072441.1
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269191..269534,269662..269722,269793..269891,269968..270243,270844..271119,271221..271484,271584..272222))
location: region:269191-272222:-1
so has part: feature:271584-272222:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269662-269722:-1:exon
so has part: feature:269191-269534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271584-272222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269662-269722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269191-269534:-1:exon

LOC101869354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869354
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 297 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072442.1
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269191..269353,269502..269534,269662..269891,269968..270243,270844..271119,271221..271484,271584..272222))
location: region:269191-272222:-1
so has part: feature:271584-272222:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269662-269891:-1:exon
so has part: feature:269502-269534:-1:exon
so has part: feature:269191-269353:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271584-272222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269662-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269502-269534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269191-269353:-1:exon

LOC101869354
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869354
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 297 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072447.1
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269200..269353,269502..269534,269662..269694,269793..269891,269968..270243,270844..271119,271221..271484,271584..272222))
location: region:269200-272222:-1
so has part: feature:271584-272222:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269662-269694:-1:exon
so has part: feature:269502-269534:-1:exon
so has part: feature:269200-269353:-1:exon

position:269200:-1
position: 269200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271584-272222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269662-269694:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269502-269534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:269200-269353:-1:exon

LOC101869354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X6
translation: MGPGSAVGLLLLCGLGGGARVLHSMRYLSIAVSDPSPGVPRFQAMGYVDRNLFVHCSSESKRCQPRTQWIEDNVGQEYWDRVNLIAQTIQQLSYDGLNTLRDLYNQSGVSPTVRVSGKEQEDGILTLTCRAHGFYPRPIVLSWLKDGEVRDQDTQWGGLAPNSDGTYYTWASIEAHPGDKDRFRCRVEHASLLQPGLYALEPHSDLLSILLPVAAVVLVAITIIGVLLWKLRAGLLMALPLCREEQGWQQRDPRHGHGLCQLSTRYELAPGGTDGVAPAPAWSLHGMQGDTEPPPRALWAQGGSPGCLFLSSLQSFLLNSCMGWMSCNRRLLLAAAPLLCAAASPSAAGNEQGLNLELLLPHKC
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269201..269534,269662..269722,269793..269891,269968..270243,271221..271484,271584..271644))
location: region:269201-271644:-1
so has part: feature:271584-271644:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269662-269722:-1:exon
so has part: feature:269201-269534:-1:exon

XP_033928337.1
type: Protein
SIO_000068: ncbiprotein

position:269201:-1
position: 269201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271644:-1
position: 271644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271584-271644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269662-269722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269201-269534:-1:exon

LOC101869354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X1
translation: MGPGSAVGLLLLCGLGGGARVLHSMRYLSIAVSDPSPGVPRFQAMGYVDRNLFVHCSSESKRCQPRTQWIEDNVGQEYWDRVNLIAQTIQQLSYDGLNTLRDLYNQSGGDHTLQCMSGCDLLDDGSTKGYTKVAYDGKDFIAFDKDTMTFIPAVPEAEIAKRKWEQDGRGDEDWNNYLENSCVEWLKKYLSYGRLELERRVSPTVRVSGKEQEDGILTLTCRAHGFYPRPIVLSWLKDGEVRDQDTQWGGLAPNSDGTYYTWASIEAHPGDKDRFRCRVEHASLLQPGLYALEPHSDLLSILLPVAAVVLVAITIIGVLLWKLRAGLLMALPLCREEQGWQQRDPRHGHGLCQLSTRYELAPGGTDGVAPAPAWSLHGMQGDTEPPPRALWAQGGSPGCLFLSSLQSFLLNSCMGWMSCNRRLLLAAAPLLCAAASPSAAGNEQGLNLELLLPHKC
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269201..269534,269662..269722,269793..269891,269968..270243,270844..271119,271221..271484,271584..271644))
location: region:269201-271644:-1
so has part: feature:271584-271644:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269662-269722:-1:exon
so has part: feature:269201-269534:-1:exon

XP_033928332.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271584-271644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269662-269722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269201-269534:-1:exon

LOC101869354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X2
translation: MGPGSAVGLLLLCGLGGGARVLHSMRYLSIAVSDPSPGVPRFQAMGYVDRNLFVHCSSESKRCQPRTQWIEDNVGQEYWDRVNLIAQTIQQLSYDGLNTLRDLYNQSGGDHTLQCMSGCDLLDDGSTKGYTKVAYDGKDFIAFDKDTMTFIPAVPEAEIAKRKWEQDGRGDEDWNNYLENSCVEWLKKYLSYGRLELERRVSPTVRVSGKEQEDGILTLTCRAHGFYPRPIVLSWLKDGEVRDQDTQWGGLAPNSDGTYYTWASIEAHPGDKDRFRCRVEHASLLQPGLYALEPHSDLLSILLPVAAVVLVAITIIGVLLWKLRAGKAPHAGREAGQELLNGSPDQPHRAADGSASLQGRTGMATARPQAWPWALPAQHQSFLLNSCMGWMSCNRRLLLAAAPLLCAAASPSAAGNEQGLNLELLLPHKC
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269201..269353,269502..269534,269662..269891,269968..270243,270844..271119,271221..271484,271584..271644))
location: region:269201-271644:-1
so has part: feature:271584-271644:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269662-269891:-1:exon
so has part: feature:269502-269534:-1:exon
so has part: feature:269201-269353:-1:exon

XP_033928333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271584-271644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269662-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269502-269534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269201-269353:-1:exon

LOC101869354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X3
translation: MGPGSAVGLLLLCGLGGGARVLHSMRYLSIAVSDPSPGVPRFQAMGYVDRNLFVHCSSESKRCQPRTQWIEDNVGQEYWDRVNLIAQTIQQLSYDGLNTLRDLYNQSGGDHTLQCMSGCDLLDDGSTKGYTKVAYDGKDFIAFDKDTMTFIPAVPEAEIAKRKWEQDGRGDEDWNNYLENSCVEWLKKYLSYGRLELERRVSPTVRVSGKEQEDGILTLTCRAHGFYPRPIVLSWLKDGEVRDQDTQWGGLAPNSDGTYYTWASIEAHPGDKDRFRCRVEHASLLQPGLYALEPHSDLLSILLPVAAVVLVAITIIGVLLWKLRAGKNRDGNSATPGMAMGSASSAPGTSWHQGVRMGWPQLLHGASMGCRGIPSPPPELCGHREVALGVSSSPPCRASYLTPAWAG
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269320..269534,269662..269694,269793..269891,269968..270243,270844..271119,271221..271484,271584..271644))
location: region:269320-271644:-1
so has part: feature:271584-271644:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269662-269694:-1:exon
so has part: feature:269320-269534:-1:exon

XP_033928334.1
type: Protein
SIO_000068: ncbiprotein

position:269320:-1
position: 269320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271584-271644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269662-269694:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269320-269534:-1:exon

LOC101869354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X4
translation: MGPGSAVGLLLLCGLGGGARVLHSMRYLSIAVSDPSPGVPRFQAMGYVDRNLFVHCSSESKRCQPRTQWIEDNVGQEYWDRVNLIAQTIQQLSYDGLNTLRDLYNQSGGDHTLQCMSGCDLLDDGSTKGYTKVAYDGKDFIAFDKDTMTFIPAVPEAEIAKRKWEQDGRGDEDWNNYLENSCVEWLKKYLSYGRLELERRVSPTVRVSGKEQEDGILTLTCRAHGFYPRPIVLSWLKDGEVRDQDTQWGGLAPNSDGTYYTWASIEAHPGDKDRFRCRVEHASLLQPGLYALEPHSDLLSILLPVAAVVLVAITIIGVLLWKLRAGKNRDGNSATPGEHRGHIQHRAGPVPPASQSSAPIGGTDGKGGVLAAHGSFSCRHGHGLCQLSTRASYLTPAWAG
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269320..269353,269502..269694,269793..269891,269968..270243,270844..271119,271221..271484,271584..271644))
location: region:269320-271644:-1
so has part: feature:271584-271644:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269502-269694:-1:exon
so has part: feature:269320-269353:-1:exon

XP_033928335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271584-271644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269502-269694:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269320-269353:-1:exon

LOC101869354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X5
translation: MGPGSAVGLLLLCGLGGGARVLHSMRYLSIAVSDPSPGVPRFQAMGYVDRNLFVHCSSESKRCQPRTQWIEDNVGQEYWDRVNLIAQTIQQLSYDGLNTLRDLYNQSGGDHTLQCMSGCDLLDDGSTKGYTKVAYDGKDFIAFDKDTMTFIPAVPEAEIAKRKWEQDGRGDEDWNNYLENSCVEWLKKYLSYGRLELERRVSPTVRVSGKEQEDGILTLTCRAHGFYPRPIVLSWLKDGEVRDQDTQWGGLAPNSDGTYYTWASIEAHPGDKDRFRCRVEHASLLQPGLYALEPHSDLLSILLPVAAVVLVAITIIGVLLWKLRAGLLMALPLCREEQGWQQRDPRHGHGLCQLSTRASYLTPAWAG
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269320..269353,269502..269534,269662..269722,269793..269891,269968..270243,270844..271119,271221..271484,271584..271644))
location: region:269320-271644:-1
so has part: feature:271584-271644:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269662-269722:-1:exon
so has part: feature:269502-269534:-1:exon
so has part: feature:269320-269353:-1:exon

XP_033928336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271584-271644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269662-269722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269502-269534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:269320-269353:-1:exon

LOC101869354
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X7
translation: MGPGSAVGLLLLCGLGGGARVLHSMRYLSIAVSDPSPGVPRFQAMGYVDRNLFVHCSSESKRCQPRTQWIEDNVGQEYWDRVNLIAQTIQQLSYDGLNTLRDLYNQSGGDHTLQCMSGCDLLDDGSTKGYTKVAYDGKDFIAFDKDTMTFIPAVPEAEIAKRKWEQDGRGDEDWNNYLENSCVEWLKKYLSYGRLELERRVSPTVRVSGKEQEDGILTLTCRAHGFYPRPIVLSWLKDGEVRDQDTQWGGLAPNSDGTYYTWASIEAHPGDKDRFRCRVEHASLLQPGLYALEPHSDLLSILLPVAAVVLVAITIIGVLLWKLRAGKNRDGNSATPGMAMGSASSAPELPT
SIO_010081: LOC101869354
subclass of: SO_0000673
so part of: LOC101869354
location: complement(join(269340..269353,269502..269534,269662..269694,269793..269891,269968..270243,270844..271119,271221..271484,271584..271644))
location: region:269340-271644:-1
so has part: feature:271584-271644:-1:exon
so has part: feature:271221-271484:-1:exon
so has part: feature:270844-271119:-1:exon
so has part: feature:269968-270243:-1:exon
so has part: feature:269793-269891:-1:exon
so has part: feature:269662-269694:-1:exon
so has part: feature:269502-269534:-1:exon
so has part: feature:269340-269353:-1:exon

XP_033928338.1
type: Protein
SIO_000068: ncbiprotein

position:269340:-1
position: 269340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271584-271644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271221-271484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270844-271119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269968-270243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269793-269891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269662-269694:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269502-269534:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:269340-269353:-1:exon

LOC117437806
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(274144..287402)
location: region:274144-287402:-1
so has part: feature:274144-287402:-1:exon
subclass of: SO_0000010

117437806
type: Gene
SIO_000068: ncbigene

position:274144:-1
position: 274144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287402:-1
position: 287402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274144-287402:-1:exon

LOC117437806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437806
product: WD repeat domain 46, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072439.1
SIO_010081: LOC117437806
subclass of: SO_0000673
so part of: LOC117437806
location: complement(join(274144..274637,275061..275162,276155..276250,277132..277226,277309..277456,278614..278767,279670..279769,280958..281093,282646..282796,284084..284188,284356..284417,285036..285123,286132..286244,287158..287402))
location: region:274144-287402:-1
so has part: feature:287158-287402:-1:exon
so has part: feature:286132-286244:-1:exon
so has part: feature:285036-285123:-1:exon
so has part: feature:284356-284417:-1:exon
so has part: feature:284084-284188:-1:exon
so has part: feature:282646-282796:-1:exon
so has part: feature:280958-281093:-1:exon
so has part: feature:279670-279769:-1:exon
so has part: feature:278614-278767:-1:exon
so has part: feature:277309-277456:-1:exon
so has part: feature:277132-277226:-1:exon
so has part: feature:276155-276250:-1:exon
so has part: feature:275061-275162:-1:exon
so has part: feature:274144-274637:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287158-287402:-1:exon

position:287158:-1
position: 287158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286132-286244:-1:exon

position:286132:-1
position: 286132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286244:-1
position: 286244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:285036-285123:-1:exon

position:285036:-1
position: 285036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285123:-1
position: 285123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284356-284417:-1:exon

position:284356:-1
position: 284356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284417:-1
position: 284417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:284084-284188:-1:exon

position:284084:-1
position: 284084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284188:-1
position: 284188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:282646-282796:-1:exon

position:282646:-1
position: 282646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282796:-1
position: 282796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:280958-281093:-1:exon

position:280958:-1
position: 280958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281093:-1
position: 281093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:279670-279769:-1:exon

position:279670:-1
position: 279670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279769:-1
position: 279769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:278614-278767:-1:exon

position:278614:-1
position: 278614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278767:-1
position: 278767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:277309-277456:-1:exon

position:277309:-1
position: 277309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277456:-1
position: 277456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:277132-277226:-1:exon

position:277132:-1
position: 277132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277226:-1
position: 277226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:276155-276250:-1:exon

position:276155:-1
position: 276155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276250:-1
position: 276250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:275061-275162:-1:exon

position:275061:-1
position: 275061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275162:-1
position: 275162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:274144-274637:-1:exon

position:274637:-1
position: 274637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437806
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437806
product: WD repeat domain 46, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034072440.1
SIO_010081: LOC117437806
subclass of: SO_0000673
so part of: LOC117437806
location: complement(join(274144..274637,275061..275162,276155..276250,277132..277226,277309..277456,278614..278767,279670..279769,280958..281093,282646..282728,282908..282975,284084..284188,284356..284417,285036..285123,286132..286244,287158..287402))
location: region:274144-287402:-1
so has part: feature:287158-287402:-1:exon
so has part: feature:286132-286244:-1:exon
so has part: feature:285036-285123:-1:exon
so has part: feature:284356-284417:-1:exon
so has part: feature:284084-284188:-1:exon
so has part: feature:282908-282975:-1:exon
so has part: feature:282646-282728:-1:exon
so has part: feature:280958-281093:-1:exon
so has part: feature:279670-279769:-1:exon
so has part: feature:278614-278767:-1:exon
so has part: feature:277309-277456:-1:exon
so has part: feature:277132-277226:-1:exon
so has part: feature:276155-276250:-1:exon
so has part: feature:275061-275162:-1:exon
so has part: feature:274144-274637:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287158-287402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286132-286244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285036-285123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284356-284417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284084-284188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282908-282975:-1:exon

position:282908:-1
position: 282908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282975:-1
position: 282975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:282646-282728:-1:exon

position:282728:-1
position: 282728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:280958-281093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279670-279769:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278614-278767:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277309-277456:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:277132-277226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:276155-276250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:275061-275162:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:274144-274637:-1:exon

LOC117437806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 46 isoform X1
translation: MAAASSSVSRRRRPRPGSASGSGALGPGRVHRRPEPGRVRGRDPRGRRAQAQKDPFPGPAALNPELVKRFRRGGGERAPRPRAPRLRRCLQSSAQREEAAAERAARTELMLPLEPGFLEPDPGQDSSTITQGDIVEAVDIASAAKHFELRLDQFGPYRIDYTRNGRHLLLGGRRGHVAALDWQTKQLQFEMNVMEQLNDVTWLHCESLLAVAQRRWLHVYDGQGLELSVLKSFPCILHLRFLPYHFLLAAASSRGLLQFLDVSVGQEVSVLSTHGGRPTTMEQNPSNAVLHVGHGNGTITLWSPSVQEPLVRMLSHRGAVRALAIDPSGTYMASAGLDRKVRLWDLRTYGALQDLVLPMGASHLDFSQRGLLAAACGDVVQVYKDIPKTLSPHPYLCHRPPGPTSALRFCPYEDVLGTGHAHGFTSILVPGAGEANWDALENNPYRSRKQRQEWEVKALLEKIPAELITLDPSLLGRMDTATLEQKREERIQRLGFDPQAKPKFKPRHRTKGSSGLRRKKKVAHEQQRAVIQKSVEQREQKRKEMGTPLTPKRGALERFKR
SIO_010081: LOC117437806
subclass of: SO_0000673
so part of: LOC117437806
location: complement(join(274536..274637,275061..275162,276155..276250,277132..277226,277309..277456,278614..278767,279670..279769,280958..281093,282646..282796,284084..284188,284356..284417,285036..285123,286132..286244,287158..287391))
location: region:274536-287391:-1
so has part: feature:287158-287391:-1:exon
so has part: feature:286132-286244:-1:exon
so has part: feature:285036-285123:-1:exon
so has part: feature:284356-284417:-1:exon
so has part: feature:284084-284188:-1:exon
so has part: feature:282646-282796:-1:exon
so has part: feature:280958-281093:-1:exon
so has part: feature:279670-279769:-1:exon
so has part: feature:278614-278767:-1:exon
so has part: feature:277309-277456:-1:exon
so has part: feature:277132-277226:-1:exon
so has part: feature:276155-276250:-1:exon
so has part: feature:275061-275162:-1:exon
so has part: feature:274536-274637:-1:exon

XP_033928330.1
type: Protein
SIO_000068: ncbiprotein

position:274536:-1
position: 274536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287391:-1
position: 287391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287158-287391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286132-286244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285036-285123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284356-284417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284084-284188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282646-282796:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280958-281093:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279670-279769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278614-278767:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:277309-277456:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277132-277226:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276155-276250:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:275061-275162:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:274536-274637:-1:exon

LOC117437806
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 46 isoform X2
translation: MAAASSSVSRRRRPRPGSASGSGALGPGRVHRRPEPGRVRGRDPRGRRAQAQKDPFPGPAALNPELVKRFRRGGGERAPRPRAPRLRRCLQSSAQREEAAAERAARTELMLPLEPGFLEPDPGQDSSTITQGDIVEAVDIASAAKHFELRLDQFGPYRIDYTRNGRHLLLGGRRGHVAALDWQTKQLQFEMNVMEQLNDVTWLHCESLLAVAQRRWLHVYDGQGLELSVLKSFPCILHLRFLPYHFLLAAASSRGLLQFLDVSVGQEVSVLSTHGGRPTTMEQNPSNAVLHVGHGNGTITLWSPSVQEPLVRMLSHRGAVRALAIDPSGTYMASAGLDRKVRLWDLRTYGALQDLVLPMGASHLDFSQRGLLAAACGDVVQVYKDIPKTLSPHPYLCHRPPGPTSALRFCPYEDVLGTGHAHGFTSILVPGAGEANWDALENNPYRSRKQRQEWEVKALLEKIPAELITLDPSLLGRMDTATLEQKREERIQRLGFDPQAKPKFKPRHRTKGSSGLRRKKKVAHEQQRAVIQKSVEQREQKRKEMGTPLTPKRGALERFKR
SIO_010081: LOC117437806
subclass of: SO_0000673
so part of: LOC117437806
location: complement(join(274536..274637,275061..275162,276155..276250,277132..277226,277309..277456,278614..278767,279670..279769,280958..281093,282646..282728,282908..282975,284084..284188,284356..284417,285036..285123,286132..286244,287158..287391))
location: region:274536-287391:-1
so has part: feature:287158-287391:-1:exon
so has part: feature:286132-286244:-1:exon
so has part: feature:285036-285123:-1:exon
so has part: feature:284356-284417:-1:exon
so has part: feature:284084-284188:-1:exon
so has part: feature:282908-282975:-1:exon
so has part: feature:282646-282728:-1:exon
so has part: feature:280958-281093:-1:exon
so has part: feature:279670-279769:-1:exon
so has part: feature:278614-278767:-1:exon
so has part: feature:277309-277456:-1:exon
so has part: feature:277132-277226:-1:exon
so has part: feature:276155-276250:-1:exon
so has part: feature:275061-275162:-1:exon
so has part: feature:274536-274637:-1:exon

XP_033928331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287158-287391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286132-286244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285036-285123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284356-284417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284084-284188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282908-282975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282646-282728:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280958-281093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279670-279769:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278614-278767:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:277309-277456:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:277132-277226:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:276155-276250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:275061-275162:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:274536-274637:-1:exon

LOC117437809
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 277053..278805
location: region:277053-278805:1
so has part: feature:277053-278805:1:exon
subclass of: SO_0000011

117437809
type: Gene
SIO_000068: ncbigene

position:277053:1
position: 277053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278805:1
position: 278805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277053-278805:1:exon

LOC117437809
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437809
product: uncharacterized LOC117437809
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004550512.1
SIO_010081: LOC117437809
subclass of: SO_0000673
so part of: LOC117437809
location: join(277053..277182,277280..277414,278633..278805)
location: region:277053-278805:1
so has part: feature:277053-277182:1:exon
so has part: feature:277280-277414:1:exon
so has part: feature:278633-278805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277053-277182:1:exon

position:277182:1
position: 277182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277280-277414:1:exon

position:277280:1
position: 277280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277414:1
position: 277414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278633-278805:1:exon

position:278633:1
position: 278633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437812
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(288493..294649)
location: region:288493-294649:-1
so has part: feature:288493-294649:-1:exon
subclass of: SO_0000010

117437812
type: Gene
SIO_000068: ncbigene

position:288493:-1
position: 288493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294649:-1
position: 294649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288493-294649:-1:exon

LOC117437812
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437812
product: ribosomal protein S18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 36 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072457.1
SIO_010081: LOC117437812
subclass of: SO_0000673
so part of: LOC117437812
location: complement(join(288493..288597,289405..289496,289599..289700,290922..291008,292678..292776,294542..294649))
location: region:288493-294649:-1
so has part: feature:294542-294649:-1:exon
so has part: feature:292678-292776:-1:exon
so has part: feature:290922-291008:-1:exon
so has part: feature:289599-289700:-1:exon
so has part: feature:289405-289496:-1:exon
so has part: feature:288493-288597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294542-294649:-1:exon

position:294542:-1
position: 294542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292678-292776:-1:exon

position:292678:-1
position: 292678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292776:-1
position: 292776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290922-291008:-1:exon

position:290922:-1
position: 290922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291008:-1
position: 291008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289599-289700:-1:exon

position:289599:-1
position: 289599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289700:-1
position: 289700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:289405-289496:-1:exon

position:289405:-1
position: 289405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289496:-1
position: 289496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:288493-288597:-1:exon

position:288597:-1
position: 288597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437812
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437812
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S18
translation: MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKKK
SIO_010081: LOC117437812
subclass of: SO_0000673
so part of: LOC117437812
location: complement(join(288522..288597,289405..289496,289599..289700,290922..291008,292678..292776,294542..294544))
location: region:288522-294544:-1
so has part: feature:294542-294544:-1:exon
so has part: feature:292678-292776:-1:exon
so has part: feature:290922-291008:-1:exon
so has part: feature:289599-289700:-1:exon
so has part: feature:289405-289496:-1:exon
so has part: feature:288522-288597:-1:exon

XP_033928348.1
type: Protein
SIO_000068: ncbiprotein

position:288522:-1
position: 288522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294544:-1
position: 294544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294542-294544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292678-292776:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290922-291008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289599-289700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289405-289496:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:288522-288597:-1:exon

LOC117437811
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 294627..320885
location: region:294627-320885:1
so has part: feature:294627-320885:1:exon
subclass of: SO_0000010

117437811
type: Gene
SIO_000068: ncbigene

position:294627:1
position: 294627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320885:1
position: 320885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294627-320885:1:exon

LOC117437811
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437811
product: VPS52 subunit of GARP complex, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072455.1
SIO_010081: LOC117437811
subclass of: SO_0000673
so part of: LOC117437811
location: join(294627..294658,295498..295558,296227..296279,296865..296940,297852..297919,301862..301926,302294..302404,303637..303787,304538..304638,305573..305705,306552..306609,309158..309291,311410..311565,312730..312848,313736..313859,315379..315474,316712..316819,316966..317031,318230..318341,319153..319271,320711..320885)
location: region:294627-320885:1
so has part: feature:294627-294658:1:exon
so has part: feature:295498-295558:1:exon
so has part: feature:296227-296279:1:exon
so has part: feature:296865-296940:1:exon
so has part: feature:297852-297919:1:exon
so has part: feature:301862-301926:1:exon
so has part: feature:302294-302404:1:exon
so has part: feature:303637-303787:1:exon
so has part: feature:304538-304638:1:exon
so has part: feature:305573-305705:1:exon
so has part: feature:306552-306609:1:exon
so has part: feature:309158-309291:1:exon
so has part: feature:311410-311565:1:exon
so has part: feature:312730-312848:1:exon
so has part: feature:313736-313859:1:exon
so has part: feature:315379-315474:1:exon
so has part: feature:316712-316819:1:exon
so has part: feature:316966-317031:1:exon
so has part: feature:318230-318341:1:exon
so has part: feature:319153-319271:1:exon
so has part: feature:320711-320885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294627-294658:1:exon

position:294658:1
position: 294658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295498-295558:1:exon

position:295498:1
position: 295498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295558:1
position: 295558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:296227-296279:1:exon

position:296227:1
position: 296227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296279:1
position: 296279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296865-296940:1:exon

position:296865:1
position: 296865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296940:1
position: 296940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:297852-297919:1:exon

position:297852:1
position: 297852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297919:1
position: 297919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:301862-301926:1:exon

position:301862:1
position: 301862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301926:1
position: 301926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:302294-302404:1:exon

position:302294:1
position: 302294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302404:1
position: 302404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:303637-303787:1:exon

position:303637:1
position: 303637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303787:1
position: 303787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:304538-304638:1:exon

position:304538:1
position: 304538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304638:1
position: 304638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:305573-305705:1:exon

position:305573:1
position: 305573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305705:1
position: 305705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:306552-306609:1:exon

position:306552:1
position: 306552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306609:1
position: 306609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:309158-309291:1:exon

position:309158:1
position: 309158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309291:1
position: 309291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:311410-311565:1:exon

position:311410:1
position: 311410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311565:1
position: 311565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:312730-312848:1:exon

position:312730:1
position: 312730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312848:1
position: 312848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:313736-313859:1:exon

position:313736:1
position: 313736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313859:1
position: 313859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:315379-315474:1:exon

position:315379:1
position: 315379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315474:1
position: 315474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:316712-316819:1:exon

position:316712:1
position: 316712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316819:1
position: 316819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:316966-317031:1:exon

position:316966:1
position: 316966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317031:1
position: 317031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:318230-318341:1:exon

position:318230:1
position: 318230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318341:1
position: 318341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:319153-319271:1:exon

position:319153:1
position: 319153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319271:1
position: 319271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:320711-320885:1:exon

position:320711:1
position: 320711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437811
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437811
product: VPS52 subunit of GARP complex, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072454.1
SIO_010081: LOC117437811
subclass of: SO_0000673
so part of: LOC117437811
location: join(294627..294658,295498..295558,296227..296279,296865..296940,297852..297919,302229..302404,303637..303787,304538..304638,305573..305705,306552..306609,309158..309291,311410..311565,312730..312848,313736..313859,315379..315474,316712..316819,316966..317031,318230..318341,319153..319271,320711..320884)
location: region:294627-320884:1
so has part: feature:294627-294658:1:exon
so has part: feature:295498-295558:1:exon
so has part: feature:296227-296279:1:exon
so has part: feature:296865-296940:1:exon
so has part: feature:297852-297919:1:exon
so has part: feature:302229-302404:1:exon
so has part: feature:303637-303787:1:exon
so has part: feature:304538-304638:1:exon
so has part: feature:305573-305705:1:exon
so has part: feature:306552-306609:1:exon
so has part: feature:309158-309291:1:exon
so has part: feature:311410-311565:1:exon
so has part: feature:312730-312848:1:exon
so has part: feature:313736-313859:1:exon
so has part: feature:315379-315474:1:exon
so has part: feature:316712-316819:1:exon
so has part: feature:316966-317031:1:exon
so has part: feature:318230-318341:1:exon
so has part: feature:319153-319271:1:exon
so has part: feature:320711-320884:1:exon

position:320884:1
position: 320884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294627-294658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295498-295558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296227-296279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296865-296940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297852-297919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302229-302404:1:exon

position:302229:1
position: 302229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:303637-303787:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304538-304638:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305573-305705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:306552-306609:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309158-309291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311410-311565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:312730-312848:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:313736-313859:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:315379-315474:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:316712-316819:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:316966-317031:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:318230-318341:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:319153-319271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:320711-320884:1:exon

LOC117437811
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437811
product: VPS52 subunit of GARP complex, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072456.1
SIO_010081: LOC117437811
subclass of: SO_0000673
so part of: LOC117437811
location: join(294627..294658,295498..295558,296227..296279,296865..296940,297852..297919,302229..302404,303637..303787,304538..304638,305573..305705,306552..306609,309158..309291,311410..311565,312730..312848,313736..313859,315379..315474,316712..316819,316966..317031,318230..318341,319153..319271,320244..320276,320744..320883)
location: region:294627-320883:1
so has part: feature:294627-294658:1:exon
so has part: feature:295498-295558:1:exon
so has part: feature:296227-296279:1:exon
so has part: feature:296865-296940:1:exon
so has part: feature:297852-297919:1:exon
so has part: feature:302229-302404:1:exon
so has part: feature:303637-303787:1:exon
so has part: feature:304538-304638:1:exon
so has part: feature:305573-305705:1:exon
so has part: feature:306552-306609:1:exon
so has part: feature:309158-309291:1:exon
so has part: feature:311410-311565:1:exon
so has part: feature:312730-312848:1:exon
so has part: feature:313736-313859:1:exon
so has part: feature:315379-315474:1:exon
so has part: feature:316712-316819:1:exon
so has part: feature:316966-317031:1:exon
so has part: feature:318230-318341:1:exon
so has part: feature:319153-319271:1:exon
so has part: feature:320244-320276:1:exon
so has part: feature:320744-320883:1:exon

position:320883:1
position: 320883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294627-294658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295498-295558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296227-296279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296865-296940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297852-297919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302229-302404:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303637-303787:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304538-304638:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305573-305705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:306552-306609:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309158-309291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311410-311565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:312730-312848:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:313736-313859:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:315379-315474:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:316712-316819:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:316966-317031:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:318230-318341:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:319153-319271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:320244-320276:1:exon

position:320244:1
position: 320244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320276:1
position: 320276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:320744-320883:1:exon

position:320744:1
position: 320744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437811
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 52 homolog isoform X2
translation: MAAAVEQDSEPTDPEREELVLEDVDVHIQANLEDALVQEALKSGVDLRQYSKQVELELQEVERASIRDYIKESENIAALHNQITACDTILERMEQMLGSFQLHLSTLTLQIRSLQDQSGALSLRLRNRRRLRRHLGQLLEELVVPSAMISTILEAPVPEPEFLEQLRELDGKLGAVKEQTFRDTLACADVQHVLDRLRIKAVTKIREFILQKIFSFRKPMTNYQIPQDALLKYRFCYRFLLGHERSVAQELRDQYVDTVGKIYLSYFRSYSSRLLKIQYEEVADKDDLMGVEDTAKKGFFSKPQLRSRNTVFTLGNRGSIISAAELEAPVLVPHAAQRSDTRYPFEALFRSQHYALLDNSCREFLFLSDFFLVSGAAAQELFNSVMGKTLAMFLKQMDTYVGSCYDAIAVFLCIHIVLRFRNIMAKRNIPAMDRYWESLLELLWPRFELLLELHIRSIQSTEPQRLGHLDTRPHYITRRYAEFSSAIVSINQTFPNERTNALLGQLQVEVENFVLRVAAEFPSRREQLIFLINNYDMMLGVLMERAVEESKEVEGFQQLLSARTQEFIEELLSPPFGGMIAFVKEAEALLEKGELERLRGEEARVSHLARGFSGSWRSSVEVLSQEVMSSFSNFRNGTSIIQGALTQLLQYYHRFLKVLAQPPLRSLPARTELINIHHLMVELKKHKPNF
SIO_010081: LOC117437811
subclass of: SO_0000673
so part of: LOC117437811
location: join(294644..294658,295498..295558,296227..296279,296865..296940,297852..297919,301862..301926,302294..302404,303637..303787,304538..304638,305573..305705,306552..306609,309158..309291,311410..311565,312730..312848,313736..313859,315379..315474,316712..316819,316966..317031,318230..318341,319153..319271,320711..320857)
location: region:294644-320857:1
so has part: feature:294644-294658:1:exon
so has part: feature:295498-295558:1:exon
so has part: feature:296227-296279:1:exon
so has part: feature:296865-296940:1:exon
so has part: feature:297852-297919:1:exon
so has part: feature:301862-301926:1:exon
so has part: feature:302294-302404:1:exon
so has part: feature:303637-303787:1:exon
so has part: feature:304538-304638:1:exon
so has part: feature:305573-305705:1:exon
so has part: feature:306552-306609:1:exon
so has part: feature:309158-309291:1:exon
so has part: feature:311410-311565:1:exon
so has part: feature:312730-312848:1:exon
so has part: feature:313736-313859:1:exon
so has part: feature:315379-315474:1:exon
so has part: feature:316712-316819:1:exon
so has part: feature:316966-317031:1:exon
so has part: feature:318230-318341:1:exon
so has part: feature:319153-319271:1:exon
so has part: feature:320711-320857:1:exon

XP_033928346.1
type: Protein
SIO_000068: ncbiprotein

position:294644:1
position: 294644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320857:1
position: 320857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294644-294658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295498-295558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296227-296279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296865-296940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297852-297919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301862-301926:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302294-302404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303637-303787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304538-304638:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305573-305705:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:306552-306609:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309158-309291:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:311410-311565:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:312730-312848:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:313736-313859:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:315379-315474:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:316712-316819:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:316966-317031:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:318230-318341:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:319153-319271:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:320711-320857:1:exon

LOC117437811
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 52 homolog isoform X3
translation: MAAAVEQDSEPTDPEREELVLEDVDVHIQANLEDALVQEALKSGVDLRQYSKQVELELQEVERASIRDYIKESENIAALHNQITACDTILERMEQMLGSFQLHLSTLTLQIRSLQDQSGALSLRLRNRRRLRRHLGQLLEELVVPSAMISTILEAPVPEPEFLEQLRELDGKLGAVKEQTFRDTLACADVQHVLDRLRIKAVTKIREFILQKIFSFRKPMTNYQIPQDALLKYRFCYRFLLGHERSVAQELRDQYVDTVGKIYLSYFRSYSSRLLKIQYEEVADKDDLMGVEDTAKKGFFSKPQLRSRNTVFTLGNRGSIISAAELEAPVLVPHAAQRSDTRYPFEALFRSQHYALLDNSCREFLFLSDFFLVSGAAAQELFNSVMGKTLAMFLKQMDTYVGSCYDAIAVFLCIHIVLRFRNIMAKRNIPAMDRYWESLLELLWPRFELLLELHIRSIQSTEPQRLGHLDTRPHYITRRYAEFSSAIVSINQTFPNERTNALLGQLQVEVENFVLRVAAEFPSRREQLIFLINNYDMMLGVLMERAVEESKEVEGFQQLLSARTQEFIEELLSPPFGGMIAFVKEAEALLEKGELERLRGEEARVSHLARGFSGSWRSSVEVLSQEVMSSFSNFRNGTSIIQGALTQLLQYYHRFLKVLAQPPLRSLPARTELINIHHLMVELKKHKPNF
SIO_010081: LOC117437811
subclass of: SO_0000673
so part of: LOC117437811
location: join(294644..294658,295498..295558,296227..296279,296865..296940,297852..297919,302229..302404,303637..303787,304538..304638,305573..305705,306552..306609,309158..309291,311410..311565,312730..312848,313736..313859,315379..315474,316712..316819,316966..317031,318230..318341,319153..319271,320244..320276,320744..320857)
location: region:294644-320857:1
so has part: feature:294644-294658:1:exon
so has part: feature:295498-295558:1:exon
so has part: feature:296227-296279:1:exon
so has part: feature:296865-296940:1:exon
so has part: feature:297852-297919:1:exon
so has part: feature:302229-302404:1:exon
so has part: feature:303637-303787:1:exon
so has part: feature:304538-304638:1:exon
so has part: feature:305573-305705:1:exon
so has part: feature:306552-306609:1:exon
so has part: feature:309158-309291:1:exon
so has part: feature:311410-311565:1:exon
so has part: feature:312730-312848:1:exon
so has part: feature:313736-313859:1:exon
so has part: feature:315379-315474:1:exon
so has part: feature:316712-316819:1:exon
so has part: feature:316966-317031:1:exon
so has part: feature:318230-318341:1:exon
so has part: feature:319153-319271:1:exon
so has part: feature:320244-320276:1:exon
so has part: feature:320744-320857:1:exon

XP_033928347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294644-294658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295498-295558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296227-296279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296865-296940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297852-297919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302229-302404:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303637-303787:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304538-304638:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305573-305705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:306552-306609:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309158-309291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311410-311565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:312730-312848:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:313736-313859:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:315379-315474:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:316712-316819:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:316966-317031:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:318230-318341:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:319153-319271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:320244-320276:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:320744-320857:1:exon

LOC117437811
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 52 homolog isoform X1
translation: MAAAVEQDSEPTDPEREELVLEDVDVHIQANLEDALVQEALKSGVDLRQYSKQVELELQEVERASIRDYIKESENIAALHNQITACDTILERMEQMLGSFQLHLSTLTLQIRSLQDQSGALSLRLRNRRRLRRHLGQLLEELVVPSAMISTILEAPVPEPEFLEQLRELDGKLGAVKEQTFRDTLACADVQHVLDRLRIKAVTKIREFILQKIFSFRKPMTNYQIPQDALLKYRFCYRFLLGHERSVAQELRDQYVDTVGKIYLSYFRSYSSRLLKIQYEEVADKDDLMGVEDTAKKGFFSKPQLRSRNTVFTLGNRGSIISAAELEAPVLVPHAAQRSDTRYPFEALFRSQHYALLDNSCREFLFLSDFFLVSGAAAQELFNSVMGKTLAMFLKQMDTYVGSCYDAIAVFLCIHIVLRFRNIMAKRNIPAMDRYWESLLELLWPRFELLLELHIRSIQSTEPQRLGHLDTRPHYITRRYAEFSSAIVSINQTFPNERTNALLGQLQVEVENFVLRVAAEFPSRREQLIFLINNYDMMLGVLMERAVEESKEVEGFQQLLSARTQEFIEELLSPPFGGMIAFVKEAEALLEKGELERLRGEEARVSHLARGFSGSWRSSVEVLSQEVMSSFSNFRNGTSIIQGALTQLLQYYHRFLKVLAQPPLRSLPARTELINIHHLMVELKKHKPNF
SIO_010081: LOC117437811
subclass of: SO_0000673
so part of: LOC117437811
location: join(294644..294658,295498..295558,296227..296279,296865..296940,297852..297919,302229..302404,303637..303787,304538..304638,305573..305705,306552..306609,309158..309291,311410..311565,312730..312848,313736..313859,315379..315474,316712..316819,316966..317031,318230..318341,319153..319271,320711..320857)
location: region:294644-320857:1
so has part: feature:294644-294658:1:exon
so has part: feature:295498-295558:1:exon
so has part: feature:296227-296279:1:exon
so has part: feature:296865-296940:1:exon
so has part: feature:297852-297919:1:exon
so has part: feature:302229-302404:1:exon
so has part: feature:303637-303787:1:exon
so has part: feature:304538-304638:1:exon
so has part: feature:305573-305705:1:exon
so has part: feature:306552-306609:1:exon
so has part: feature:309158-309291:1:exon
so has part: feature:311410-311565:1:exon
so has part: feature:312730-312848:1:exon
so has part: feature:313736-313859:1:exon
so has part: feature:315379-315474:1:exon
so has part: feature:316712-316819:1:exon
so has part: feature:316966-317031:1:exon
so has part: feature:318230-318341:1:exon
so has part: feature:319153-319271:1:exon
so has part: feature:320711-320857:1:exon

XP_033928345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294644-294658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295498-295558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296227-296279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296865-296940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297852-297919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302229-302404:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303637-303787:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304538-304638:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305573-305705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:306552-306609:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309158-309291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311410-311565:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:312730-312848:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:313736-313859:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:315379-315474:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:316712-316819:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:316966-317031:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:318230-318341:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:319153-319271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:320711-320857:1:exon

LOC117437810
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(322454..332577)
location: region:322454-332577:-1
so has part: feature:322454-332577:-1:exon
subclass of: SO_0000010

117437810
type: Gene
SIO_000068: ncbigene

position:322454:-1
position: 322454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332577:-1
position: 332577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322454-332577:-1:exon

LOC117437810
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437810
product: ring finger protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072450.1
SIO_010081: LOC117437810
subclass of: SO_0000673
so part of: LOC117437810
location: complement(join(322454..322592,323936..324173,326188..326478,327615..327700,327915..328044,330392..330552,332469..332577))
location: region:322454-332577:-1
so has part: feature:332469-332577:-1:exon
so has part: feature:330392-330552:-1:exon
so has part: feature:327915-328044:-1:exon
so has part: feature:327615-327700:-1:exon
so has part: feature:326188-326478:-1:exon
so has part: feature:323936-324173:-1:exon
so has part: feature:322454-322592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332469-332577:-1:exon

position:332469:-1
position: 332469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:330392-330552:-1:exon

position:330392:-1
position: 330392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330552:-1
position: 330552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327915-328044:-1:exon

position:327915:-1
position: 327915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328044:-1
position: 328044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:327615-327700:-1:exon

position:327615:-1
position: 327615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327700:-1
position: 327700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326188-326478:-1:exon

position:326188:-1
position: 326188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326478:-1
position: 326478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:323936-324173:-1:exon

position:323936:-1
position: 323936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324173:-1
position: 324173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:322454-322592:-1:exon

position:322592:-1
position: 322592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437810
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437810
product: ring finger protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072452.1
SIO_010081: LOC117437810
subclass of: SO_0000673
so part of: LOC117437810
location: complement(join(322454..322592,323936..324173,326188..326478,327829..328044,330392..330552,332469..332577))
location: region:322454-332577:-1
so has part: feature:332469-332577:-1:exon
so has part: feature:330392-330552:-1:exon
so has part: feature:327829-328044:-1:exon
so has part: feature:326188-326478:-1:exon
so has part: feature:323936-324173:-1:exon
so has part: feature:322454-322592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332469-332577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330392-330552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327829-328044:-1:exon

position:327829:-1
position: 327829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326188-326478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323936-324173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322454-322592:-1:exon

LOC117437810
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437810
product: ring finger protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072451.1
SIO_010081: LOC117437810
subclass of: SO_0000673
so part of: LOC117437810
location: complement(join(322454..322592,323936..324173,326188..326478,327615..327700,327915..328044,330392..330528,330903..330933))
location: region:322454-330933:-1
so has part: feature:330903-330933:-1:exon
so has part: feature:330392-330528:-1:exon
so has part: feature:327915-328044:-1:exon
so has part: feature:327615-327700:-1:exon
so has part: feature:326188-326478:-1:exon
so has part: feature:323936-324173:-1:exon
so has part: feature:322454-322592:-1:exon

position:330933:-1
position: 330933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330903-330933:-1:exon

position:330903:-1
position: 330903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:330392-330528:-1:exon

position:330528:-1
position: 330528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327915-328044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327615-327700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326188-326478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323936-324173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322454-322592:-1:exon

LOC117437810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING1 isoform X1
translation: MAAPANTQSATKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLSRLHNQQALSTSIEEGLKMQAMHRAQRVRKLPPESDNATLSGGEDTCDARSQFSTTSGPGPSRKRSRGSEDSGPDGGGGGGGGGGGGGGGRAEVEVGAAEIELVFRAHPLLVEKGEYNQTRYVKTTSNATVDHLSKYLALRIALEETPVPEAPVPTPAPPGGGTGTGTNTSTGTGAGGALQEVSEKQYTIYIPTAAGAFTTLNGSLTLELVNEKYWKVSKPLELYYAPTKEQK
SIO_010081: LOC117437810
subclass of: SO_0000673
so part of: LOC117437810
location: complement(join(322491..322592,323936..324173,326188..326478,327615..327700,327915..328044,330392..330552,332469..332546))
location: region:322491-332546:-1
so has part: feature:332469-332546:-1:exon
so has part: feature:330392-330552:-1:exon
so has part: feature:327915-328044:-1:exon
so has part: feature:327615-327700:-1:exon
so has part: feature:326188-326478:-1:exon
so has part: feature:323936-324173:-1:exon
so has part: feature:322491-322592:-1:exon

XP_033928341.1
type: Protein
SIO_000068: ncbiprotein

position:322491:-1
position: 322491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332546:-1
position: 332546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332469-332546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330392-330552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327915-328044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327615-327700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326188-326478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323936-324173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322491-322592:-1:exon

LOC117437810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING1 isoform X3
translation: MAAPANTQSATKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLSRLHNQQALSTSIEEGLKMQAMHRAQRVRKLPPESDNATLSGGEDTCDARSQFSTTSGPGPSRKRSRGSEDSGPDGGGGGGGGGGGGGGGRAEVEVGAAEIELVFRAHPLLVEKGEYNQTRYVKTTSNATVDHLSKYLALRIALEETPVPEAPVPTPAPPGGGTGTGTNTSTGTGAGGALQEVSEKQYTIYIPTAAGAFTTLNGSLTLELVNEKYWKVSKPLELYYAPTKEQK
SIO_010081: LOC117437810
subclass of: SO_0000673
so part of: LOC117437810
location: complement(join(322491..322592,323936..324173,326188..326478,327829..328044,330392..330552,332469..332546))
location: region:322491-332546:-1
so has part: feature:332469-332546:-1:exon
so has part: feature:330392-330552:-1:exon
so has part: feature:327829-328044:-1:exon
so has part: feature:326188-326478:-1:exon
so has part: feature:323936-324173:-1:exon
so has part: feature:322491-322592:-1:exon

XP_033928343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332469-332546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330392-330552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327829-328044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326188-326478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323936-324173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322491-322592:-1:exon

LOC117437810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437810
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING1 isoform X2
translation: MDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQDRVLAKLSRLHNQQALSTSIEEGLKMQAMHRAQRVRKLPPESDNATLSGGEDTCDARSQFSTTSGPGPSRKRSRGSEDSGPDGGGGGGGGGGGGGGGRAEVEVGAAEIELVFRAHPLLVEKGEYNQTRYVKTTSNATVDHLSKYLALRIALEETPVPEAPVPTPAPPGGGTGTGTNTSTGTGAGGALQEVSEKQYTIYIPTAAGAFTTLNGSLTLELVNEKYWKVSKPLELYYAPTKEQK
SIO_010081: LOC117437810
subclass of: SO_0000673
so part of: LOC117437810
location: complement(join(322491..322592,323936..324173,326188..326478,327615..327700,327915..328044,330392..330528,330903..330917))
location: region:322491-330917:-1
so has part: feature:330903-330917:-1:exon
so has part: feature:330392-330528:-1:exon
so has part: feature:327915-328044:-1:exon
so has part: feature:327615-327700:-1:exon
so has part: feature:326188-326478:-1:exon
so has part: feature:323936-324173:-1:exon
so has part: feature:322491-322592:-1:exon

XP_033928342.1
type: Protein
SIO_000068: ncbiprotein

position:330917:-1
position: 330917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330903-330917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330392-330528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327915-328044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327615-327700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326188-326478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323936-324173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322491-322592:-1:exon

LOC117437813
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(333310..340620)
location: region:333310-340620:-1
so has part: feature:333310-340620:-1:exon
subclass of: SO_0000010

117437813
type: Gene
SIO_000068: ncbigene

position:333310:-1
position: 333310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340620:-1
position: 340620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333310-340620:-1:exon

LOC117437813
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437813
product: hydroxysteroid 17-beta dehydrogenase 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034072458.1
SIO_010081: LOC117437813
subclass of: SO_0000673
so part of: LOC117437813
location: complement(join(333310..333365,333959..334033,334131..334173,335003..335055,338134..338230,339038..339154,340418..340620))
location: region:333310-340620:-1
so has part: feature:340418-340620:-1:exon
so has part: feature:339038-339154:-1:exon
so has part: feature:338134-338230:-1:exon
so has part: feature:335003-335055:-1:exon
so has part: feature:334131-334173:-1:exon
so has part: feature:333959-334033:-1:exon
so has part: feature:333310-333365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340418-340620:-1:exon

position:340418:-1
position: 340418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339038-339154:-1:exon

position:339038:-1
position: 339038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339154:-1
position: 339154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:338134-338230:-1:exon

position:338134:-1
position: 338134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338230:-1
position: 338230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335003-335055:-1:exon

position:335003:-1
position: 335003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335055:-1
position: 335055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:334131-334173:-1:exon

position:334131:-1
position: 334131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334173:-1
position: 334173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:333959-334033:-1:exon

position:333959:-1
position: 333959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334033:-1
position: 334033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:333310-333365:-1:exon

position:333365:-1
position: 333365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437813
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: estradiol 17-beta-dehydrogenase 8
translation: MGEREFREVLDVNLLGSFLLSQALAEALVTSGAPGALPGAGGQHRGQGFIVTPMTSTVPPKVLSKFAGMVPLGRLGQPDDVADVIEFLVSDRSSYITGASVEVTGGLFM
SIO_010081: LOC117437813
subclass of: SO_0000673
so part of: LOC117437813
location: complement(join(333349..333365,333959..334033,334131..334173,335003..335055,338134..338230,339038..339082))
location: region:333349-339082:-1
so has part: feature:339038-339082:-1:exon
so has part: feature:338134-338230:-1:exon
so has part: feature:335003-335055:-1:exon
so has part: feature:334131-334173:-1:exon
so has part: feature:333959-334033:-1:exon
so has part: feature:333349-333365:-1:exon

XP_033928349.1
type: Protein
SIO_000068: ncbiprotein

position:333349:-1
position: 333349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339082:-1
position: 339082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339038-339082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338134-338230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335003-335055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334131-334173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333959-334033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333349-333365:-1:exon

LOC117437805
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(344172..351630)
location: region:344172-351630:-1
so has part: feature:344172-351630:-1:exon
subclass of: SO_0000010

117437805
type: Gene
SIO_000068: ncbigene

position:344172:-1
position: 344172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351630:-1
position: 351630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344172-351630:-1:exon

LOC117437805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437805
product: solute carrier family 39 member 7
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 72% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072437.1
SIO_010081: LOC117437805
subclass of: SO_0000673
so part of: LOC117437805
location: complement(join(344172..344412,346411..346608,347400..347492,348226..348351,348779..348817,350251..350418,351531..351630))
location: region:344172-351630:-1
so has part: feature:351531-351630:-1:exon
so has part: feature:350251-350418:-1:exon
so has part: feature:348779-348817:-1:exon
so has part: feature:348226-348351:-1:exon
so has part: feature:347400-347492:-1:exon
so has part: feature:346411-346608:-1:exon
so has part: feature:344172-344412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351531-351630:-1:exon

position:351531:-1
position: 351531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:350251-350418:-1:exon

position:350251:-1
position: 350251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350418:-1
position: 350418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348779-348817:-1:exon

position:348779:-1
position: 348779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348817:-1
position: 348817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:348226-348351:-1:exon

position:348226:-1
position: 348226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348351:-1
position: 348351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:347400-347492:-1:exon

position:347400:-1
position: 347400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347492:-1
position: 347492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:346411-346608:-1:exon

position:346411:-1
position: 346411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346608:-1
position: 346608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:344172-344412:-1:exon

position:344412:-1
position: 344412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437805
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc transporter SLC39A7
translation: MDIPIPIGIPLHPRGQNLGGSPTSWNTVDTVGADHVIRCPHQPLSLPPPPPPPIGLLQPRAPEAPAAAAELCCWGTAGDAFLHLIPHALAPHGPGGHGHSHHGHGHGDVLAVGIWVLAGIVAFLVLETGVRHIKGGQHGHGHGHGSKAKSSSSEDEGGDTSAPSGQRGNRRTESSGLAVSGYLNLVADVTHNFTDGLAIGASFMAGSGLGPVTALTVLLHELPHELGDVVMLLRAGCSRGQALRLQLLTALGAVGGAGVSLLVGGGWDQGLLPFTAGGFIYVSTVGVIPELLRGGGGXGAMGQVLALVGGVALMGGIALYE
SIO_010081: LOC117437805
subclass of: SO_0000673
so part of: LOC117437805
location: complement(join(344172..344412,346411..346608,347400..347492,348226..348351,348779..348817,350251..350418,351531..351630))
location: region:344172-351630:-1
so has part: feature:351531-351630:-1:exon
so has part: feature:350251-350418:-1:exon
so has part: feature:348779-348817:-1:exon
so has part: feature:348226-348351:-1:exon
so has part: feature:347400-347492:-1:exon
so has part: feature:346411-346608:-1:exon
so has part: feature:344172-344412:-1:exon

XP_033928328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351531-351630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350251-350418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348779-348817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348226-348351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347400-347492:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346411-346608:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344172-344412:-1:exon