Melopsittacus undulatus isolate bMelUnd1 chromosome 25, bMelUnd1.mat.Z, whole genome shotgun sequence.
type: Entry
definition: Melopsittacus undulatus isolate bMelUnd1 chromosome 25, bMelUnd1.mat.Z, whole genome shotgun sequence.
sequence version: NC_047551.1
sequence date: 2020-05-06
sequence: sequence
division: CON
label: NC_047551.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA629576
dblink: SAMN12623090
keyword: WGS
keyword: RefSeq
source: Melopsittacus undulatus (budgerigar)
organism: Melopsittacus undulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittaculidae; Melopsittacus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022656.1.\nAssembly name: bMelUnd1.mat.Z\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the G10K on 2020/04/13. The\noriginal whole-genome shotgun project has the accession\nJAAVWG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: G10K\nAssembly Date :: 24-FEB-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; Freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-02-24; VGP assembly\n pipeline v. 1.6\nAssembly Name :: bMelUnd1.mat.Z\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 61.11x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Melopsittacus undulatus Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 425885
topology: linear
so has quality: SO_0000987
location: 1..425885
location: region:1-425885:1
RO_0002162: 13146

NC_047551
type: RefSeq
SIO_000068: refseq

PRJNA629576
type: BioProject
SIO_000068: bioproject

SAMN12623090
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425885:1
position: 425885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-425885:1:source
so part of: sequence
organism: Melopsittacus undulatus
mol type: genomic DNA
isolate: bMelUnd1
chromosome: 25
sex: female
tissue type: blood
dev stage: juvenile
country: USA: New Mexico State University
lat lon: 32.278282 N 106.74994 W
collection date: 02-Nov-2018
collected by: Timothy Wright, Justin Apodaca

13146
type: Taxonomy
SIO_000068: taxonomy

LOC115945291
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945291
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9689..10420)
location: region:9689-10420:-1
so has part: feature:9689-10420:-1:exon
subclass of: SO_0000011

115945291
type: Gene
SIO_000068: ncbigene

position:9689:-1
position: 9689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10420:-1
position: 10420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9689-10420:-1:exon

LOC115945291
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC115945291
product: uncharacterized LOC115945291
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004079654.2
SIO_010081: LOC115945291
subclass of: SO_0000673
so part of: LOC115945291
location: complement(join(9689..9826,9914..9975,10320..10420))
location: region:9689-10420:-1
so has part: feature:10320-10420:-1:exon
so has part: feature:9914-9975:-1:exon
so has part: feature:9689-9826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10320-10420:-1:exon

position:10320:-1
position: 10320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9914-9975:-1:exon

position:9914:-1
position: 9914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9975:-1
position: 9975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9689-9826:-1:exon

position:9826:-1
position: 9826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115945292
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10462..13303)
location: region:10462-13303:-1
so has part: feature:10462-13303:-1:exon
subclass of: SO_0000010

115945292
type: Gene
SIO_000068: ncbigene

position:10462:-1
position: 10462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13303:-1
position: 13303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10462-13303:-1:exon

LOC115945292
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945292
product: mucin-3B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072254.1
SIO_010081: LOC115945292
subclass of: SO_0000673
so part of: LOC115945292
location: complement(join(10462..10657,10764..10926,11009..11074,11467..11615,11856..11914,11994..12112,12990..13175,13255..13303))
location: region:10462-13303:-1
so has part: feature:13255-13303:-1:exon
so has part: feature:12990-13175:-1:exon
so has part: feature:11994-12112:-1:exon
so has part: feature:11856-11914:-1:exon
so has part: feature:11467-11615:-1:exon
so has part: feature:11009-11074:-1:exon
so has part: feature:10764-10926:-1:exon
so has part: feature:10462-10657:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13255-13303:-1:exon

position:13255:-1
position: 13255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12990-13175:-1:exon

position:12990:-1
position: 12990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13175:-1
position: 13175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11994-12112:-1:exon

position:11994:-1
position: 11994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12112:-1
position: 12112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11856-11914:-1:exon

position:11856:-1
position: 11856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11914:-1
position: 11914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11467-11615:-1:exon

position:11467:-1
position: 11467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11615:-1
position: 11615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11009-11074:-1:exon

position:11009:-1
position: 11009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11074:-1
position: 11074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10764-10926:-1:exon

position:10764:-1
position: 10764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10926:-1
position: 10926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10462-10657:-1:exon

position:10657:-1
position: 10657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115945292
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945292
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-3B-like
translation: MKTKVDNREFTPELQNKSSPAFQDFEKEFKEQMRDLYKDIEGYHDVVIHELTQGSIVVNYTVLLKVPASTKANETLKTISDDLISAITSSTTCDENCKEANCSFCFNATFTNVTNYEVEEVEESICDSLSLMNFSSYYSPLLTTTGIICISRCDQRASDPLPCVFGTCKLLQGGPKCMCSEKAAFWYRDDACSSRISKVGVAIGVPVTGLVLAISIFIVFLVRARRQKEMYRQVGWGQGVVP
SIO_010081: LOC115945292
subclass of: SO_0000673
so part of: LOC115945292
location: complement(join(10462..10657,10764..10926,11009..11074,11467..11615,11856..11914,11994..12089))
location: region:10462-12089:-1
so has part: feature:11994-12089:-1:exon
so has part: feature:11856-11914:-1:exon
so has part: feature:11467-11615:-1:exon
so has part: feature:11009-11074:-1:exon
so has part: feature:10764-10926:-1:exon
so has part: feature:10462-10657:-1:exon

XP_033928145.1
type: Protein
SIO_000068: ncbiprotein

position:12089:-1
position: 12089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11994-12089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11856-11914:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11467-11615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11009-11074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10764-10926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10462-10657:-1:exon

LOC117437671
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 27441..32754
location: region:27441-32754:1
so has part: feature:27441-32754:1:exon
subclass of: SO_0000010

117437671
type: Gene
SIO_000068: ncbigene

position:27441:1
position: 27441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32754:1
position: 32754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27441-32754:1:exon

LOC117437671
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437671
product: adaptor related protein complex 1 subunit sigma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034072230.1
SIO_010081: LOC117437671
subclass of: SO_0000673
so part of: LOC117437671
location: join(27441..27623,27762..27788,28911..29089,30004..30112,30695..30832,32312..32754)
location: region:27441-32754:1
so has part: feature:27441-27623:1:exon
so has part: feature:27762-27788:1:exon
so has part: feature:28911-29089:1:exon
so has part: feature:30004-30112:1:exon
so has part: feature:30695-30832:1:exon
so has part: feature:32312-32754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27441-27623:1:exon

position:27623:1
position: 27623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27762-27788:1:exon

position:27762:1
position: 27762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27788:1
position: 27788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28911-29089:1:exon

position:28911:1
position: 28911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29089:1
position: 29089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:30004-30112:1:exon

position:30004:1
position: 30004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30112:1
position: 30112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:30695-30832:1:exon

position:30695:1
position: 30695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30832:1
position: 30832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:32312-32754:1:exon

position:32312:1
position: 32312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437671
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437671
product: adaptor related protein complex 1 subunit sigma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072231.1
SIO_010081: LOC117437671
subclass of: SO_0000673
so part of: LOC117437671
location: join(27441..27597,27762..27788,28911..29089,30004..30112,30695..30832,32312..32754)
location: region:27441-32754:1
so has part: feature:27441-27597:1:exon
so has part: feature:27762-27788:1:exon
so has part: feature:28911-29089:1:exon
so has part: feature:30004-30112:1:exon
so has part: feature:30695-30832:1:exon
so has part: feature:32312-32754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27441-27597:1:exon

position:27597:1
position: 27597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27762-27788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28911-29089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30004-30112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30695-30832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32312-32754:1:exon

LOC117437671
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437671
product: adaptor related protein complex 1 subunit sigma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072232.1
SIO_010081: LOC117437671
subclass of: SO_0000673
so part of: LOC117437671
location: join(27468..27485,27762..27788,28911..29089,30004..30112,30695..30832,32312..32754)
location: region:27468-32754:1
so has part: feature:27468-27485:1:exon
so has part: feature:27762-27788:1:exon
so has part: feature:28911-29089:1:exon
so has part: feature:30004-30112:1:exon
so has part: feature:30695-30832:1:exon
so has part: feature:32312-32754:1:exon

position:27468:1
position: 27468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27468-27485:1:exon

position:27485:1
position: 27485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27762-27788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28911-29089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30004-30112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30695-30832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32312-32754:1:exon

LOC117437671
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit sigma-1A
translation: MMRFMLLFSRQGKLRLQKWFLATADRDKKKLVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFVMGGEIQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA
SIO_010081: LOC117437671
subclass of: SO_0000673
so part of: LOC117437671
location: join(27786..27788,28911..29089,30004..30112,30695..30832,32312..32359)
location: region:27786-32359:1
so has part: feature:27786-27788:1:exon
so has part: feature:28911-29089:1:exon
so has part: feature:30004-30112:1:exon
so has part: feature:30695-30832:1:exon
so has part: feature:32312-32359:1:exon

XP_033928121.1
type: Protein
SIO_000068: ncbiprotein

position:27786:1
position: 27786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32359:1
position: 32359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27786-27788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28911-29089:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30004-30112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30695-30832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32312-32359:1:exon

LOC117437671
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit sigma-1A
translation: MMRFMLLFSRQGKLRLQKWFLATADRDKKKLVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFVMGGEIQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA
SIO_010081: LOC117437671
subclass of: SO_0000673
so part of: LOC117437671
location: join(27786..27788,28911..29089,30004..30112,30695..30832,32312..32359)
location: region:27786-32359:1
so has part: feature:27786-27788:1:exon
so has part: feature:28911-29089:1:exon
so has part: feature:30004-30112:1:exon
so has part: feature:30695-30832:1:exon
so has part: feature:32312-32359:1:exon

XP_033928122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27786-27788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28911-29089:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30004-30112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30695-30832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32312-32359:1:exon

LOC117437671
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit sigma-1A
translation: MMRFMLLFSRQGKLRLQKWFLATADRDKKKLVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFVMGGEIQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA
SIO_010081: LOC117437671
subclass of: SO_0000673
so part of: LOC117437671
location: join(27786..27788,28911..29089,30004..30112,30695..30832,32312..32359)
location: region:27786-32359:1
so has part: feature:27786-27788:1:exon
so has part: feature:28911-29089:1:exon
so has part: feature:30004-30112:1:exon
so has part: feature:30695-30832:1:exon
so has part: feature:32312-32359:1:exon

XP_033928123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27786-27788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28911-29089:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30004-30112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30695-30832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32312-32359:1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 40057..40130
location: region:40057-40130:1
so has part: feature:40057-40130:1:exon
subclass of: SO_0000663

117437692
type: Gene
SIO_000068: ncbigene

position:40057:1
position: 40057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40130:1
position: 40130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40057-40130:1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13146
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:40091..40093,aa:Thr,seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: 40057..40130
location: region:40057-40130:1
so has part: feature:40057-40130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40057-40130:1:exon

LOC117437660
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41028..41443)
location: region:41028-41443:-1
so has part: feature:41028-41443:-1:exon
subclass of: SO_0000011

117437660
type: Gene
SIO_000068: ncbigene

position:41028:-1
position: 41028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41443:-1
position: 41443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41028-41443:-1:exon

LOC117437660
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437660
product: uncharacterized LOC117437660
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004550486.1
SIO_010081: LOC117437660
subclass of: SO_0000673
so part of: LOC117437660
location: complement(join(41028..41159,41238..41296,41384..41443))
location: region:41028-41443:-1
so has part: feature:41384-41443:-1:exon
so has part: feature:41238-41296:-1:exon
so has part: feature:41028-41159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41384-41443:-1:exon

position:41384:-1
position: 41384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41238-41296:-1:exon

position:41238:-1
position: 41238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41296:-1
position: 41296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41028-41159:-1:exon

position:41159:-1
position: 41159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115945999
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(52763..54585)
location: region:52763-54585:-1
so has part: feature:52763-54585:-1:exon
subclass of: SO_0000010

115945999
type: Gene
SIO_000068: ncbigene

position:52763:-1
position: 52763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54585:-1
position: 54585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52763-54585:-1:exon

LOC115945999
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945999
product: mucin-3B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072216.1
SIO_010081: LOC115945999
subclass of: SO_0000673
so part of: LOC115945999
location: complement(join(52763..52891,53561..53748,53826..53974,54055..54113,54193..54320,54404..54511,54582..54585))
location: region:52763-54585:-1
so has part: feature:54582-54585:-1:exon
so has part: feature:54404-54511:-1:exon
so has part: feature:54193-54320:-1:exon
so has part: feature:54055-54113:-1:exon
so has part: feature:53826-53974:-1:exon
so has part: feature:53561-53748:-1:exon
so has part: feature:52763-52891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54582-54585:-1:exon

position:54582:-1
position: 54582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54404-54511:-1:exon

position:54404:-1
position: 54404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54511:-1
position: 54511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:54193-54320:-1:exon

position:54193:-1
position: 54193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54320:-1
position: 54320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:54055-54113:-1:exon

position:54055:-1
position: 54055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54113:-1
position: 54113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:53826-53974:-1:exon

position:53826:-1
position: 53826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53974:-1
position: 53974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:53561-53748:-1:exon

position:53561:-1
position: 53561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53748:-1
position: 53748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:52763-52891:-1:exon

position:52891:-1
position: 52891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115945999
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-3B-like
translation: MGFCYNGGTHDGIKCLCTPIFYGPSCEFSTESFNTNLPFPGTILAHADLEVTVTNFNFTEDLLDITSEAYGAFEDLFHKEMMRIYGSIPGYEGVKIETLRRGSIVVTYEVFFTLVASNNVSQDVEDITHGLVLTLKEVEDGQGACQNETDILCLKVAENPLIGNVTETSDLDGETLPGPHHHPWTRQVHGCNSFILISTSSSSSHTVSVSIPSYFADTTGGSVSCITTCTPNRPTSLQCHHGQCRVTLQGSSCL
SIO_010081: LOC115945999
subclass of: SO_0000673
so part of: LOC115945999
location: complement(join(52763..52891,53561..53748,53826..53974,54055..54113,54193..54320,54404..54511,54582..54585))
location: region:52763-54585:-1
so has part: feature:54582-54585:-1:exon
so has part: feature:54404-54511:-1:exon
so has part: feature:54193-54320:-1:exon
so has part: feature:54055-54113:-1:exon
so has part: feature:53826-53974:-1:exon
so has part: feature:53561-53748:-1:exon
so has part: feature:52763-52891:-1:exon

XP_033928107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54582-54585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54404-54511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54193-54320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54055-54113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53826-53974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53561-53748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:52763-52891:-1:exon

LOC115945377
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(66772..90013)
location: region:66772-90013:-1
so has part: feature:66772-90013:-1:exon
subclass of: SO_0000010

115945377
type: Gene
SIO_000068: ncbigene

position:66772:-1
position: 66772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90013:-1
position: 90013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66772-90013:-1:exon

LOC115945377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945377
product: RNA polymerase II subunit A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072223.1
SIO_010081: LOC115945377
subclass of: SO_0000673
so part of: LOC115945377
location: complement(join(66772..68192,68548..68697,68930..69043,70219..70405,71075..71278,71903..72085,72483..72587,72669..72769,73311..73557,74050..74274,75235..75440,76061..76166,76407..76578,77237..77420,78007..78229,79151..79354,79794..79888,80364..80532,81061..81270,82158..82368,82909..83033,83669..83801,84512..84732,85500..85661,86599..86880,87487..87660,88277..88413,88996..89128,89924..90013))
location: region:66772-90013:-1
so has part: feature:89924-90013:-1:exon
so has part: feature:88996-89128:-1:exon
so has part: feature:88277-88413:-1:exon
so has part: feature:87487-87660:-1:exon
so has part: feature:86599-86880:-1:exon
so has part: feature:85500-85661:-1:exon
so has part: feature:84512-84732:-1:exon
so has part: feature:83669-83801:-1:exon
so has part: feature:82909-83033:-1:exon
so has part: feature:82158-82368:-1:exon
so has part: feature:81061-81270:-1:exon
so has part: feature:80364-80532:-1:exon
so has part: feature:79794-79888:-1:exon
so has part: feature:79151-79354:-1:exon
so has part: feature:78007-78229:-1:exon
so has part: feature:77237-77420:-1:exon
so has part: feature:76407-76578:-1:exon
so has part: feature:76061-76166:-1:exon
so has part: feature:75235-75440:-1:exon
so has part: feature:74050-74274:-1:exon
so has part: feature:73311-73557:-1:exon
so has part: feature:72669-72769:-1:exon
so has part: feature:72483-72587:-1:exon
so has part: feature:71903-72085:-1:exon
so has part: feature:71075-71278:-1:exon
so has part: feature:70219-70405:-1:exon
so has part: feature:68930-69043:-1:exon
so has part: feature:68548-68697:-1:exon
so has part: feature:66772-68192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89924-90013:-1:exon

position:89924:-1
position: 89924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88996-89128:-1:exon

position:88996:-1
position: 88996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89128:-1
position: 89128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88277-88413:-1:exon

position:88277:-1
position: 88277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88413:-1
position: 88413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87487-87660:-1:exon

position:87487:-1
position: 87487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87660:-1
position: 87660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:86599-86880:-1:exon

position:86599:-1
position: 86599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86880:-1
position: 86880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:85500-85661:-1:exon

position:85500:-1
position: 85500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85661:-1
position: 85661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:84512-84732:-1:exon

position:84512:-1
position: 84512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84732:-1
position: 84732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:83669-83801:-1:exon

position:83669:-1
position: 83669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83801:-1
position: 83801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:82909-83033:-1:exon

position:82909:-1
position: 82909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83033:-1
position: 83033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:82158-82368:-1:exon

position:82158:-1
position: 82158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82368:-1
position: 82368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:81061-81270:-1:exon

position:81061:-1
position: 81061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81270:-1
position: 81270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:80364-80532:-1:exon

position:80364:-1
position: 80364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80532:-1
position: 80532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:79794-79888:-1:exon

position:79794:-1
position: 79794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79888:-1
position: 79888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:79151-79354:-1:exon

position:79151:-1
position: 79151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79354:-1
position: 79354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:78007-78229:-1:exon

position:78007:-1
position: 78007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78229:-1
position: 78229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:77237-77420:-1:exon

position:77237:-1
position: 77237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77420:-1
position: 77420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:76407-76578:-1:exon

position:76407:-1
position: 76407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76578:-1
position: 76578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:76061-76166:-1:exon

position:76061:-1
position: 76061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76166:-1
position: 76166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:75235-75440:-1:exon

position:75235:-1
position: 75235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75440:-1
position: 75440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:74050-74274:-1:exon

position:74050:-1
position: 74050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74274:-1
position: 74274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:73311-73557:-1:exon

position:73311:-1
position: 73311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73557:-1
position: 73557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:72669-72769:-1:exon

position:72669:-1
position: 72669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72769:-1
position: 72769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:72483-72587:-1:exon

position:72483:-1
position: 72483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72587:-1
position: 72587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:71903-72085:-1:exon

position:71903:-1
position: 71903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72085:-1
position: 72085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:71075-71278:-1:exon

position:71075:-1
position: 71075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71278:-1
position: 71278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:70219-70405:-1:exon

position:70219:-1
position: 70219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70405:-1
position: 70405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:68930-69043:-1:exon

position:68930:-1
position: 68930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69043:-1
position: 69043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:68548-68697:-1:exon

position:68548:-1
position: 68548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68697:-1
position: 68697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:66772-68192:-1:exon

position:68192:-1
position: 68192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115945377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945377
product: RNA polymerase II subunit A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072225.1
SIO_010081: LOC115945377
subclass of: SO_0000673
so part of: LOC115945377
location: complement(join(66772..68192,68548..68697,68930..69043,70219..70405,71075..71278,71903..72085,72483..72587,72669..72769,73311..73557,74050..74274,75235..75440,76061..76166,76407..76578,77237..77420,78007..78229,79151..79354,79794..79888,80364..80532,81061..81270,82158..82368,82909..83033,83669..83801,84512..84732,85500..85661,86276..86343))
location: region:66772-86343:-1
so has part: feature:86276-86343:-1:exon
so has part: feature:85500-85661:-1:exon
so has part: feature:84512-84732:-1:exon
so has part: feature:83669-83801:-1:exon
so has part: feature:82909-83033:-1:exon
so has part: feature:82158-82368:-1:exon
so has part: feature:81061-81270:-1:exon
so has part: feature:80364-80532:-1:exon
so has part: feature:79794-79888:-1:exon
so has part: feature:79151-79354:-1:exon
so has part: feature:78007-78229:-1:exon
so has part: feature:77237-77420:-1:exon
so has part: feature:76407-76578:-1:exon
so has part: feature:76061-76166:-1:exon
so has part: feature:75235-75440:-1:exon
so has part: feature:74050-74274:-1:exon
so has part: feature:73311-73557:-1:exon
so has part: feature:72669-72769:-1:exon
so has part: feature:72483-72587:-1:exon
so has part: feature:71903-72085:-1:exon
so has part: feature:71075-71278:-1:exon
so has part: feature:70219-70405:-1:exon
so has part: feature:68930-69043:-1:exon
so has part: feature:68548-68697:-1:exon
so has part: feature:66772-68192:-1:exon

position:86343:-1
position: 86343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86276-86343:-1:exon

position:86276:-1
position: 86276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85500-85661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84512-84732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83669-83801:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82909-83033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82158-82368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81061-81270:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80364-80532:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79794-79888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:79151-79354:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78007-78229:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77237-77420:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:76407-76578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:76061-76166:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75235-75440:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74050-74274:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:73311-73557:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72669-72769:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:72483-72587:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:71903-72085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:71075-71278:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:70219-70405:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:68930-69043:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:68548-68697:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:66772-68192:-1:exon

LOC115945377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945377
product: RNA polymerase II subunit A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072224.1
SIO_010081: LOC115945377
subclass of: SO_0000673
so part of: LOC115945377
location: complement(join(66772..68192,68548..68697,68930..69043,70219..70405,71075..71278,71903..72085,72483..72587,72669..72769,73311..73557,74050..74274,75235..75440,76061..76166,76407..76578,77237..77420,78007..78229,79151..79354,79794..79888,80364..80532,81061..81270,82158..82368,82909..83033,83669..83801,84512..84732,85500..85661,86144..86211))
location: region:66772-86211:-1
so has part: feature:86144-86211:-1:exon
so has part: feature:85500-85661:-1:exon
so has part: feature:84512-84732:-1:exon
so has part: feature:83669-83801:-1:exon
so has part: feature:82909-83033:-1:exon
so has part: feature:82158-82368:-1:exon
so has part: feature:81061-81270:-1:exon
so has part: feature:80364-80532:-1:exon
so has part: feature:79794-79888:-1:exon
so has part: feature:79151-79354:-1:exon
so has part: feature:78007-78229:-1:exon
so has part: feature:77237-77420:-1:exon
so has part: feature:76407-76578:-1:exon
so has part: feature:76061-76166:-1:exon
so has part: feature:75235-75440:-1:exon
so has part: feature:74050-74274:-1:exon
so has part: feature:73311-73557:-1:exon
so has part: feature:72669-72769:-1:exon
so has part: feature:72483-72587:-1:exon
so has part: feature:71903-72085:-1:exon
so has part: feature:71075-71278:-1:exon
so has part: feature:70219-70405:-1:exon
so has part: feature:68930-69043:-1:exon
so has part: feature:68548-68697:-1:exon
so has part: feature:66772-68192:-1:exon

position:86211:-1
position: 86211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86144-86211:-1:exon

position:86144:-1
position: 86144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85500-85661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84512-84732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83669-83801:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82909-83033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82158-82368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81061-81270:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80364-80532:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79794-79888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:79151-79354:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78007-78229:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77237-77420:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:76407-76578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:76061-76166:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75235-75440:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74050-74274:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:73311-73557:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72669-72769:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:72483-72587:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:71903-72085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:71075-71278:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:70219-70405:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:68930-69043:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:68548-68697:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:66772-68192:-1:exon

LOC115945377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945377
product: RNA polymerase II subunit A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072226.1
SIO_010081: LOC115945377
subclass of: SO_0000673
so part of: LOC115945377
location: complement(join(66772..68192,68548..68697,68930..69043,70219..70405,71075..71278,71903..72085,72483..72587,72669..72769,73311..73557,74050..74274,75235..75440,76061..76166,76407..76578,77237..77420,78007..78229,79151..79354,79794..79888,80364..80532,81061..81270,82158..82368,82909..83033,83669..83801,84330..84381))
location: region:66772-84381:-1
so has part: feature:84330-84381:-1:exon
so has part: feature:83669-83801:-1:exon
so has part: feature:82909-83033:-1:exon
so has part: feature:82158-82368:-1:exon
so has part: feature:81061-81270:-1:exon
so has part: feature:80364-80532:-1:exon
so has part: feature:79794-79888:-1:exon
so has part: feature:79151-79354:-1:exon
so has part: feature:78007-78229:-1:exon
so has part: feature:77237-77420:-1:exon
so has part: feature:76407-76578:-1:exon
so has part: feature:76061-76166:-1:exon
so has part: feature:75235-75440:-1:exon
so has part: feature:74050-74274:-1:exon
so has part: feature:73311-73557:-1:exon
so has part: feature:72669-72769:-1:exon
so has part: feature:72483-72587:-1:exon
so has part: feature:71903-72085:-1:exon
so has part: feature:71075-71278:-1:exon
so has part: feature:70219-70405:-1:exon
so has part: feature:68930-69043:-1:exon
so has part: feature:68548-68697:-1:exon
so has part: feature:66772-68192:-1:exon

position:84381:-1
position: 84381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84330-84381:-1:exon

position:84330:-1
position: 84330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83669-83801:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82909-83033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82158-82368:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81061-81270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80364-80532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:79794-79888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:79151-79354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:78007-78229:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77237-77420:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76407-76578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76061-76166:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75235-75440:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:74050-74274:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73311-73557:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:72669-72769:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72483-72587:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71903-72085:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:71075-71278:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:70219-70405:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:68930-69043:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:68548-68697:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:66772-68192:-1:exon

LOC115945377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1 isoform X1
translation: MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLAKTMKILRCVCFFCSKLLVDSNNPKIRDILAKSKGQPKKRLSHVYDLCKGKNICEGGEEMDHKFGVEQPDGDDELARDKGHGGCGRYQPRIRRSGLELYAEWKHVNEDSQDKKILLSPERVHEVFKRISDEECLVLGMDPKFARPEWMVCTVLPVPPLAVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQANRPVMGIVQDTLTAVRKFTKRDVFLQRGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDCTNERALRRTLQEELVKDILSNAHIQNELEREFEKMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPIKVVEGVRELSRRLVIVNGEDPLSRQAQHNATLLFNIHLRSTLCARRMADEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSTLPGMGMGGTTGMFFGSAPSPMGGLSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEDN
SIO_010081: LOC115945377
subclass of: SO_0000673
so part of: LOC115945377
location: complement(join(67036..68192,68548..68697,68930..69043,70219..70405,71075..71278,71903..72085,72483..72587,72669..72769,73311..73557,74050..74274,75235..75440,76061..76166,76407..76578,77237..77420,78007..78229,79151..79354,79794..79888,80364..80532,81061..81270,82158..82368,82909..83033,83669..83801,84512..84732,85500..85661,86599..86880,87487..87660,88277..88413,88996..89128,89924..90013))
location: region:67036-90013:-1
so has part: feature:89924-90013:-1:exon
so has part: feature:88996-89128:-1:exon
so has part: feature:88277-88413:-1:exon
so has part: feature:87487-87660:-1:exon
so has part: feature:86599-86880:-1:exon
so has part: feature:85500-85661:-1:exon
so has part: feature:84512-84732:-1:exon
so has part: feature:83669-83801:-1:exon
so has part: feature:82909-83033:-1:exon
so has part: feature:82158-82368:-1:exon
so has part: feature:81061-81270:-1:exon
so has part: feature:80364-80532:-1:exon
so has part: feature:79794-79888:-1:exon
so has part: feature:79151-79354:-1:exon
so has part: feature:78007-78229:-1:exon
so has part: feature:77237-77420:-1:exon
so has part: feature:76407-76578:-1:exon
so has part: feature:76061-76166:-1:exon
so has part: feature:75235-75440:-1:exon
so has part: feature:74050-74274:-1:exon
so has part: feature:73311-73557:-1:exon
so has part: feature:72669-72769:-1:exon
so has part: feature:72483-72587:-1:exon
so has part: feature:71903-72085:-1:exon
so has part: feature:71075-71278:-1:exon
so has part: feature:70219-70405:-1:exon
so has part: feature:68930-69043:-1:exon
so has part: feature:68548-68697:-1:exon
so has part: feature:67036-68192:-1:exon

XP_033928114.1
type: Protein
SIO_000068: ncbiprotein

position:67036:-1
position: 67036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89924-90013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88996-89128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88277-88413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87487-87660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86599-86880:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85500-85661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84512-84732:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83669-83801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:82909-83033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:82158-82368:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81061-81270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:80364-80532:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:79794-79888:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:79151-79354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:78007-78229:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:77237-77420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:76407-76578:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:76061-76166:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:75235-75440:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74050-74274:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:73311-73557:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:72669-72769:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:72483-72587:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:71903-72085:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:71075-71278:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:70219-70405:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:68930-69043:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:68548-68697:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:67036-68192:-1:exon

LOC115945377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1 isoform X3
translation: MQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQANRPVMGIVQDTLTAVRKFTKRDVFLQRGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDCTNERALRRTLQEELVKDILSNAHIQNELEREFEKMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPIKVVEGVRELSRRLVIVNGEDPLSRQAQHNATLLFNIHLRSTLCARRMADEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSTLPGMGMGGTTGMFFGSAPSPMGGLSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEDN
SIO_010081: LOC115945377
subclass of: SO_0000673
so part of: LOC115945377
location: complement(join(67036..68192,68548..68697,68930..69043,70219..70405,71075..71278,71903..72085,72483..72587,72669..72769,73311..73557,74050..74274,75235..75440,76061..76166,76407..76578,77237..77420,78007..78229,79151..79354,79794..79888,80364..80532,81061..81270,82158..82368,82909..83033,83669..83801,84512..84732,85500..85661,86276..86299))
location: region:67036-86299:-1
so has part: feature:86276-86299:-1:exon
so has part: feature:85500-85661:-1:exon
so has part: feature:84512-84732:-1:exon
so has part: feature:83669-83801:-1:exon
so has part: feature:82909-83033:-1:exon
so has part: feature:82158-82368:-1:exon
so has part: feature:81061-81270:-1:exon
so has part: feature:80364-80532:-1:exon
so has part: feature:79794-79888:-1:exon
so has part: feature:79151-79354:-1:exon
so has part: feature:78007-78229:-1:exon
so has part: feature:77237-77420:-1:exon
so has part: feature:76407-76578:-1:exon
so has part: feature:76061-76166:-1:exon
so has part: feature:75235-75440:-1:exon
so has part: feature:74050-74274:-1:exon
so has part: feature:73311-73557:-1:exon
so has part: feature:72669-72769:-1:exon
so has part: feature:72483-72587:-1:exon
so has part: feature:71903-72085:-1:exon
so has part: feature:71075-71278:-1:exon
so has part: feature:70219-70405:-1:exon
so has part: feature:68930-69043:-1:exon
so has part: feature:68548-68697:-1:exon
so has part: feature:67036-68192:-1:exon

XP_033928116.1
type: Protein
SIO_000068: ncbiprotein

position:86299:-1
position: 86299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86276-86299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85500-85661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84512-84732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83669-83801:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82909-83033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82158-82368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81061-81270:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80364-80532:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79794-79888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:79151-79354:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78007-78229:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77237-77420:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:76407-76578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:76061-76166:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75235-75440:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74050-74274:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:73311-73557:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72669-72769:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:72483-72587:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:71903-72085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:71075-71278:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:70219-70405:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:68930-69043:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:68548-68697:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:67036-68192:-1:exon

LOC115945377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1 isoform X2
translation: MQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQANRPVMGIVQDTLTAVRKFTKRDVFLQRGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDCTNERALRRTLQEELVKDILSNAHIQNELEREFEKMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPIKVVEGVRELSRRLVIVNGEDPLSRQAQHNATLLFNIHLRSTLCARRMADEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSTLPGMGMGGTTGMFFGSAPSPMGGLSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEDN
SIO_010081: LOC115945377
subclass of: SO_0000673
so part of: LOC115945377
location: complement(join(67036..68192,68548..68697,68930..69043,70219..70405,71075..71278,71903..72085,72483..72587,72669..72769,73311..73557,74050..74274,75235..75440,76061..76166,76407..76578,77237..77420,78007..78229,79151..79354,79794..79888,80364..80532,81061..81270,82158..82368,82909..83033,83669..83801,84512..84732,85500..85661,86144..86167))
location: region:67036-86167:-1
so has part: feature:86144-86167:-1:exon
so has part: feature:85500-85661:-1:exon
so has part: feature:84512-84732:-1:exon
so has part: feature:83669-83801:-1:exon
so has part: feature:82909-83033:-1:exon
so has part: feature:82158-82368:-1:exon
so has part: feature:81061-81270:-1:exon
so has part: feature:80364-80532:-1:exon
so has part: feature:79794-79888:-1:exon
so has part: feature:79151-79354:-1:exon
so has part: feature:78007-78229:-1:exon
so has part: feature:77237-77420:-1:exon
so has part: feature:76407-76578:-1:exon
so has part: feature:76061-76166:-1:exon
so has part: feature:75235-75440:-1:exon
so has part: feature:74050-74274:-1:exon
so has part: feature:73311-73557:-1:exon
so has part: feature:72669-72769:-1:exon
so has part: feature:72483-72587:-1:exon
so has part: feature:71903-72085:-1:exon
so has part: feature:71075-71278:-1:exon
so has part: feature:70219-70405:-1:exon
so has part: feature:68930-69043:-1:exon
so has part: feature:68548-68697:-1:exon
so has part: feature:67036-68192:-1:exon

XP_033928115.1
type: Protein
SIO_000068: ncbiprotein

position:86167:-1
position: 86167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86144-86167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85500-85661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84512-84732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83669-83801:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82909-83033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82158-82368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81061-81270:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80364-80532:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79794-79888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:79151-79354:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78007-78229:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77237-77420:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:76407-76578:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:76061-76166:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75235-75440:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74050-74274:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:73311-73557:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72669-72769:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:72483-72587:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:71903-72085:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:71075-71278:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:70219-70405:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:68930-69043:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:68548-68697:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:67036-68192:-1:exon

LOC115945377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1 isoform X4
translation: MTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQANRPVMGIVQDTLTAVRKFTKRDVFLQRGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDCTNERALRRTLQEELVKDILSNAHIQNELEREFEKMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPIKVVEGVRELSRRLVIVNGEDPLSRQAQHNATLLFNIHLRSTLCARRMADEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSTLPGMGMGGTTGMFFGSAPSPMGGLSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEDN
SIO_010081: LOC115945377
subclass of: SO_0000673
so part of: LOC115945377
location: complement(join(67036..68192,68548..68697,68930..69043,70219..70405,71075..71278,71903..72085,72483..72587,72669..72769,73311..73557,74050..74274,75235..75440,76061..76166,76407..76578,77237..77420,78007..78229,79151..79354,79794..79888,80364..80532,81061..81270,82158..82368,82909..83033,83669..83801,84330..84370))
location: region:67036-84370:-1
so has part: feature:84330-84370:-1:exon
so has part: feature:83669-83801:-1:exon
so has part: feature:82909-83033:-1:exon
so has part: feature:82158-82368:-1:exon
so has part: feature:81061-81270:-1:exon
so has part: feature:80364-80532:-1:exon
so has part: feature:79794-79888:-1:exon
so has part: feature:79151-79354:-1:exon
so has part: feature:78007-78229:-1:exon
so has part: feature:77237-77420:-1:exon
so has part: feature:76407-76578:-1:exon
so has part: feature:76061-76166:-1:exon
so has part: feature:75235-75440:-1:exon
so has part: feature:74050-74274:-1:exon
so has part: feature:73311-73557:-1:exon
so has part: feature:72669-72769:-1:exon
so has part: feature:72483-72587:-1:exon
so has part: feature:71903-72085:-1:exon
so has part: feature:71075-71278:-1:exon
so has part: feature:70219-70405:-1:exon
so has part: feature:68930-69043:-1:exon
so has part: feature:68548-68697:-1:exon
so has part: feature:67036-68192:-1:exon

XP_033928117.1
type: Protein
SIO_000068: ncbiprotein

position:84370:-1
position: 84370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84330-84370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83669-83801:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82909-83033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82158-82368:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81061-81270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80364-80532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:79794-79888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:79151-79354:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:78007-78229:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77237-77420:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76407-76578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76061-76166:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75235-75440:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:74050-74274:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73311-73557:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:72669-72769:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72483-72587:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71903-72085:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:71075-71278:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:70219-70405:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:68930-69043:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:68548-68697:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:67036-68192:-1:exon

LOC117437669
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90541..93925
location: region:90541-93925:1
so has part: feature:90541-93925:1:exon
subclass of: SO_0000011

117437669
type: Gene
SIO_000068: ncbigene

position:90541:1
position: 90541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93925:1
position: 93925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90541-93925:1:exon

LOC117437669
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437669
product: uncharacterized LOC117437669, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004550488.1
SIO_010081: LOC117437669
subclass of: SO_0000673
so part of: LOC117437669
location: join(90541..90681,92714..92761,93820..93925)
location: region:90541-93925:1
so has part: feature:90541-90681:1:exon
so has part: feature:92714-92761:1:exon
so has part: feature:93820-93925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90541-90681:1:exon

position:90681:1
position: 90681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92714-92761:1:exon

position:92714:1
position: 92714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92761:1
position: 92761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93820-93925:1:exon

position:93820:1
position: 93820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437669
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437669
product: uncharacterized LOC117437669, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004550489.1
SIO_010081: LOC117437669
subclass of: SO_0000673
so part of: LOC117437669
location: join(91913..91979,92714..92761,93820..93925)
location: region:91913-93925:1
so has part: feature:91913-91979:1:exon
so has part: feature:92714-92761:1:exon
so has part: feature:93820-93925:1:exon

position:91913:1
position: 91913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91913-91979:1:exon

position:91979:1
position: 91979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92714-92761:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93820-93925:1:exon

LOC117437663
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 93954..98201
location: region:93954-98201:1
so has part: feature:93954-98201:1:exon
subclass of: SO_0000010

117437663
type: Gene
SIO_000068: ncbigene

position:93954:1
position: 93954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98201:1
position: 98201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93954-98201:1:exon

LOC117437663
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437663
product: zinc finger and BTB domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072217.1
SIO_010081: LOC117437663
subclass of: SO_0000673
so part of: LOC117437663
location: join(93954..94180,94418..97509,98162..98201)
location: region:93954-98201:1
so has part: feature:93954-94180:1:exon
so has part: feature:94418-97509:1:exon
so has part: feature:98162-98201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93954-94180:1:exon

position:94180:1
position: 94180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94418-97509:1:exon

position:94418:1
position: 94418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97509:1
position: 97509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98162-98201:1:exon

position:98162:1
position: 98162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437663
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 4
translation: MALTSSVTSSSSEAPMALTSSSSTPSASTSVTPLALTSSPSLAPLTPLALTSSVSSPSLAPLALTSSSSSSSPLAAAAAALAPLAAAAASLAPLTSSLTSSSLAPLASSSTPSPVTSSLTSSLTPLTSASPSLTPLTPSLTPLAPPSPSLTPLAPSLTPLAPPSPSLTPLTPLSTSLAPPSPSLTPLAPPSPSLTPLAPPSPSLTPLAPPSPSLTQLTPPSPSLTPMAPPSPSSAPLAPPSPSSPPPLGCGLCGRAFASAPALTFHLKLHRGRRGLGCRHCGKSFIHVKRLQTHEVLCRDGDGAMDNTMANNTVANSTMANSAMDNTMTNNTMDNSTMDSSTMDNNAMDNNTIAKSTVANTMTSTMDSTMTNSTMVNNTVAATMISTMDNNTMANSTMGNSTMDNTMANNVIDSITMDTTKAMVGNGTIVINSSMDTTVTSNSTNTMKVNSTMDTTNTMKVNSTMDTTNTMKVNSAMDTTNTVKINSTVDTTNTVNVHSTMDTTNTMKVNSTMDTTNTMKVNSAMDTTNTVNVHSAIDSPKPMVCNTSMNTTNTTVPVNSPTATTTTMANSPMATPKTPPPPTITTPPKPGKKALLLRHRALEPAPEPDAVVKVVDGHLVYACSTCQRSYMTLSSLKRHANVHSWRRTYPCRYCDKVFALAEYRTKHEVWHTGERRYQCVFCWDTFVTYYNLKTHQKTAHGINPALISSEKTPNGGYRPKVDALKLYRLLPMRAHKRPYKTYSQEATPHGFVVPAVAAAEPTSVIAYGRPPSVIMRNSAATTATPGGGGGGAYNRPGPTPVVPPIKKQVLKEYIEAQQAAAAAATPQPAPCSAAGDSRTMTYVAKPACSGPLGGLCQITVRIGQEAVVKRSIAESHLHPPATGGGTGDPEERLWGYSPKAKRKAAAGGAGTHGTGGSEGVKAPPWRRGWQHPCGVCGKSFPALRKLRRHQRGHPELGGDKGGVVGAGVGGAGVAAPPRVGRRPSLRFACSRCVKVCRTAAALSRHLKRHQAEVQAEGGGAEGYGPIEGTGGGGGHKEVGVAPGDAMGDSGSEGAGGDNRRTGDAMGDVTVTSAPPGVGGGYPVQEQPLALLSHAPFYRPRLLLL
SIO_010081: LOC117437663
subclass of: SO_0000673
so part of: LOC117437663
location: join(93998..94180,94418..97509,98162..98201)
location: region:93998-98201:1
so has part: feature:93998-94180:1:exon
so has part: feature:94418-97509:1:exon
so has part: feature:98162-98201:1:exon

XP_033928108.1
type: Protein
SIO_000068: ncbiprotein

position:93998:1
position: 93998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93998-94180:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94418-97509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98162-98201:1:exon

LOC101877643
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101877643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 99680..104498
location: region:99680-104498:1
so has part: feature:99680-104498:1:exon
subclass of: SO_0000010

101877643
type: Gene
SIO_000068: ncbigene

position:99680:1
position: 99680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104498:1
position: 104498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99680-104498:1:exon

LOC101877643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101877643
product: trafficking protein particle complex 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072245.1
SIO_010081: LOC101877643
subclass of: SO_0000673
so part of: LOC101877643
location: join(99680..99784,99916..100014,100662..100732,101451..101589,102939..104498)
location: region:99680-104498:1
so has part: feature:99680-99784:1:exon
so has part: feature:99916-100014:1:exon
so has part: feature:100662-100732:1:exon
so has part: feature:101451-101589:1:exon
so has part: feature:102939-104498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99680-99784:1:exon

position:99784:1
position: 99784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99916-100014:1:exon

position:99916:1
position: 99916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100014:1
position: 100014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100662-100732:1:exon

position:100662:1
position: 100662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100732:1
position: 100732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101451-101589:1:exon

position:101451:1
position: 101451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101589:1
position: 101589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:102939-104498:1:exon

position:102939:1
position: 102939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101877643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101877643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 1
translation: MTIHNLYIFDRTGTCLHYSEWHRRRQAGIPKEEEFKLMFGMLFSLCSFVNKMSPTDMREGFVSFQTSRYRLHYLESPSGVRLVLNTDLGVSSARDALQHIYSNLFVELVVKNPLCPPRAPVQSELFRSRLDAFIRGLPFFAPRPS
SIO_010081: LOC101877643
subclass of: SO_0000673
so part of: LOC101877643
location: join(99916..100014,100662..100732,101451..101589,102939..103067)
location: region:99916-103067:1
so has part: feature:99916-100014:1:exon
so has part: feature:100662-100732:1:exon
so has part: feature:101451-101589:1:exon
so has part: feature:102939-103067:1:exon

XP_033928136.1
type: Protein
SIO_000068: ncbiprotein

position:103067:1
position: 103067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99916-100014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100662-100732:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101451-101589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102939-103067:1:exon

LOC117437675
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 104812..111340
location: region:104812-111340:1
so has part: feature:104812-111340:1:exon
subclass of: SO_0000010

117437675
type: Gene
SIO_000068: ncbigene

position:104812:1
position: 104812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111340:1
position: 111340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104812-111340:1:exon

LOC117437675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437675
product: WD repeat containing antisense to TP53, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072236.1
SIO_010081: LOC117437675
subclass of: SO_0000673
so part of: LOC117437675
location: join(104812..104865,104946..104994,105476..105574,106265..106367,106601..106689,107206..107296,108133..108265,108833..109041,109491..109594,109693..109839,110386..111340)
location: region:104812-111340:1
so has part: feature:104812-104865:1:exon
so has part: feature:104946-104994:1:exon
so has part: feature:105476-105574:1:exon
so has part: feature:106265-106367:1:exon
so has part: feature:106601-106689:1:exon
so has part: feature:107206-107296:1:exon
so has part: feature:108133-108265:1:exon
so has part: feature:108833-109041:1:exon
so has part: feature:109491-109594:1:exon
so has part: feature:109693-109839:1:exon
so has part: feature:110386-111340:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104812-104865:1:exon

position:104865:1
position: 104865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104946-104994:1:exon

position:104946:1
position: 104946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104994:1
position: 104994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105476-105574:1:exon

position:105476:1
position: 105476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105574:1
position: 105574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:106265-106367:1:exon

position:106265:1
position: 106265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106367:1
position: 106367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:106601-106689:1:exon

position:106601:1
position: 106601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106689:1
position: 106689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107206-107296:1:exon

position:107206:1
position: 107206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107296:1
position: 107296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108133-108265:1:exon

position:108133:1
position: 108133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108265:1
position: 108265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:108833-109041:1:exon

position:108833:1
position: 108833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109041:1
position: 109041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:109491-109594:1:exon

position:109491:1
position: 109491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109594:1
position: 109594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:109693-109839:1:exon

position:109693:1
position: 109693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109839:1
position: 109839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:110386-111340:1:exon

position:110386:1
position: 110386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437675
product: WD repeat containing antisense to TP53, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034072237.1
SIO_010081: LOC117437675
subclass of: SO_0000673
so part of: LOC117437675
location: join(104812..104865,104946..104994,105476..105574,106265..106367,106601..106689,107206..107296,108133..108265,108833..109041,109491..109594,109693..109839,110386..110865,110902..111340)
location: region:104812-111340:1
so has part: feature:104812-104865:1:exon
so has part: feature:104946-104994:1:exon
so has part: feature:105476-105574:1:exon
so has part: feature:106265-106367:1:exon
so has part: feature:106601-106689:1:exon
so has part: feature:107206-107296:1:exon
so has part: feature:108133-108265:1:exon
so has part: feature:108833-109041:1:exon
so has part: feature:109491-109594:1:exon
so has part: feature:109693-109839:1:exon
so has part: feature:110386-110865:1:exon
so has part: feature:110902-111340:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104812-104865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104946-104994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105476-105574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106265-106367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106601-106689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107206-107296:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108133-108265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108833-109041:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109491-109594:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109693-109839:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110386-110865:1:exon

position:110865:1
position: 110865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:110902-111340:1:exon

position:110902:1
position: 110902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase Cajal body protein 1 isoform X1
translation: MAAPMERAPPPAETTHEAAEEPMGLPPLSPDHPPRLLGGAQDEFRLRPHNFLRGCKWAPDGSCVLSCSADNTLRLFNLPACPPPGQDLLQLELALRVHEGDIIYDFTWFPHMNSRDPQTCLMASSSRDNPVHLWDAFDGTLRGSFCAYNHLEVLCAPHSLCFTLDGSRLLGGFKGSVRIFPMERPGRGQEEHVLRYGSKRQGGPIGCLAMSPSQSVFACGSYGRSLGLYALGGGGALLFWPRLPAAPTQLLFSHDGLRLYVGGRKDTHILCWDLRLPDRPLLAMERHVTTNQRVTFDLDPTGRYLVSGDTRGFVSLWDTVGTPPEGTDLPLLSPVLRFRALQDCINGTSLHPQLPLLATSSGQRLFPPLWSSDEEEDEPPPGGDNRLQLWWWGHEPPEDNGWCMAMDSEQEDTHCHPMGGTDCDTDCQLIEDTHCHPTGGTGSDADCQLVEDTHCHPTGGTDCDADSHPMGDAHCHPMGGTDCDADCQHIEDTHCHPMGDTHCHPIEDDHCHPAEDTDCDTHCHPTEDTGTVSGDCHPPGDTDCDASIDYPMSSECDPAQGH
SIO_010081: LOC117437675
subclass of: SO_0000673
so part of: LOC117437675
location: join(104844..104865,104946..104994,105476..105574,106265..106367,106601..106689,107206..107296,108133..108265,108833..109041,109491..109594,109693..109839,110386..111028)
location: region:104844-111028:1
so has part: feature:104844-104865:1:exon
so has part: feature:104946-104994:1:exon
so has part: feature:105476-105574:1:exon
so has part: feature:106265-106367:1:exon
so has part: feature:106601-106689:1:exon
so has part: feature:107206-107296:1:exon
so has part: feature:108133-108265:1:exon
so has part: feature:108833-109041:1:exon
so has part: feature:109491-109594:1:exon
so has part: feature:109693-109839:1:exon
so has part: feature:110386-111028:1:exon

XP_033928127.1
type: Protein
SIO_000068: ncbiprotein

position:104844:1
position: 104844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111028:1
position: 111028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104844-104865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104946-104994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105476-105574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106265-106367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106601-106689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107206-107296:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108133-108265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108833-109041:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109491-109594:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109693-109839:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110386-111028:1:exon

LOC117437675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase Cajal body protein 1 isoform X2
translation: MAAPMERAPPPAETTHEAAEEPMGLPPLSPDHPPRLLGGAQDEFRLRPHNFLRGCKWAPDGSCVLSCSADNTLRLFNLPACPPPGQDLLQLELALRVHEGDIIYDFTWFPHMNSRDPQTCLMASSSRDNPVHLWDAFDGTLRGSFCAYNHLEVLCAPHSLCFTLDGSRLLGGFKGSVRIFPMERPGRGQEEHVLRYGSKRQGGPIGCLAMSPSQSVFACGSYGRSLGLYALGGGGALLFWPRLPAAPTQLLFSHDGLRLYVGGRKDTHILCWDLRLPDRPLLAMERHVTTNQRVTFDLDPTGRYLVSGDTRGFVSLWDTVGTPPEGTDLPLLSPVLRFRALQDCINGTSLHPQLPLLATSSGQRLFPPLWSSDEEEDEPPPGGDNRLQLWWWGHEPPEDNGWCMAMDSEQEDTHCHPMGGTDCDTDCQLIEDTHCHPTGGTGSDADCQLVEDTHCHPTGGTDCDADSHPMGDAHCHPMGGTDCDADCQHIEDTHCHPMGDTHCHPIEDDHCHPTEDTGTVSGDCHPPGDTDCDASIDYPMSSECDPAQGH
SIO_010081: LOC117437675
subclass of: SO_0000673
so part of: LOC117437675
location: join(104844..104865,104946..104994,105476..105574,106265..106367,106601..106689,107206..107296,108133..108265,108833..109041,109491..109594,109693..109839,110386..110865,110902..111028)
location: region:104844-111028:1
so has part: feature:104844-104865:1:exon
so has part: feature:104946-104994:1:exon
so has part: feature:105476-105574:1:exon
so has part: feature:106265-106367:1:exon
so has part: feature:106601-106689:1:exon
so has part: feature:107206-107296:1:exon
so has part: feature:108133-108265:1:exon
so has part: feature:108833-109041:1:exon
so has part: feature:109491-109594:1:exon
so has part: feature:109693-109839:1:exon
so has part: feature:110386-110865:1:exon
so has part: feature:110902-111028:1:exon

XP_033928128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104844-104865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104946-104994:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105476-105574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106265-106367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106601-106689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107206-107296:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108133-108265:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108833-109041:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109491-109594:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109693-109839:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110386-110865:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110902-111028:1:exon

LOC117437690
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 113377..122579
location: region:113377-122579:1
so has part: feature:113377-122579:1:exon
subclass of: SO_0000011

117437690
type: Gene
SIO_000068: ncbigene

position:113377:1
position: 113377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122579:1
position: 122579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113377-122579:1:exon

LOC117437690
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437690
product: uncharacterized LOC117437690
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004550491.1
SIO_010081: LOC117437690
subclass of: SO_0000673
so part of: LOC117437690
location: join(113377..113523,120547..120638,121116..121207,121728..121857,122480..122579)
location: region:113377-122579:1
so has part: feature:113377-113523:1:exon
so has part: feature:120547-120638:1:exon
so has part: feature:121116-121207:1:exon
so has part: feature:121728-121857:1:exon
so has part: feature:122480-122579:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113377-113523:1:exon

position:113523:1
position: 113523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120547-120638:1:exon

position:120547:1
position: 120547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120638:1
position: 120638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121116-121207:1:exon

position:121116:1
position: 121116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121207:1
position: 121207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:121728-121857:1:exon

position:121728:1
position: 121728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121857:1
position: 121857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:122480-122579:1:exon

position:122480:1
position: 122480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437664
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437664
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 122847..137539
location: region:122847-137539:1
so has part: feature:122847-137539:1:exon
subclass of: SO_0000010

117437664
type: Gene
SIO_000068: ncbigene

position:122847:1
position: 122847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137539:1
position: 137539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122847-137539:1:exon

LOC117437664
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437664
product: lysine demethylase 6B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072218.1
SIO_010081: LOC117437664
subclass of: SO_0000673
so part of: LOC117437664
location: join(122847..122860,122957..123104,124190..124279,124419..124550,125261..125362,126947..127054,127965..128209,128761..128887,129975..130080,131325..131530,132424..132488,132587..132658,133301..133449,134089..134203,134834..135021,135430..135571,136001..136127,136734..136904,137396..137539)
location: region:122847-137539:1
so has part: feature:122847-122860:1:exon
so has part: feature:122957-123104:1:exon
so has part: feature:124190-124279:1:exon
so has part: feature:124419-124550:1:exon
so has part: feature:125261-125362:1:exon
so has part: feature:126947-127054:1:exon
so has part: feature:127965-128209:1:exon
so has part: feature:128761-128887:1:exon
so has part: feature:129975-130080:1:exon
so has part: feature:131325-131530:1:exon
so has part: feature:132424-132488:1:exon
so has part: feature:132587-132658:1:exon
so has part: feature:133301-133449:1:exon
so has part: feature:134089-134203:1:exon
so has part: feature:134834-135021:1:exon
so has part: feature:135430-135571:1:exon
so has part: feature:136001-136127:1:exon
so has part: feature:136734-136904:1:exon
so has part: feature:137396-137539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122847-122860:1:exon

position:122860:1
position: 122860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:122957-123104:1:exon

position:122957:1
position: 122957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123104:1
position: 123104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124190-124279:1:exon

position:124190:1
position: 124190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124279:1
position: 124279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:124419-124550:1:exon

position:124419:1
position: 124419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124550:1
position: 124550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:125261-125362:1:exon

position:125261:1
position: 125261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125362:1
position: 125362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:126947-127054:1:exon

position:126947:1
position: 126947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127054:1
position: 127054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:127965-128209:1:exon

position:127965:1
position: 127965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128209:1
position: 128209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:128761-128887:1:exon

position:128761:1
position: 128761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128887:1
position: 128887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:129975-130080:1:exon

position:129975:1
position: 129975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130080:1
position: 130080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:131325-131530:1:exon

position:131325:1
position: 131325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131530:1
position: 131530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:132424-132488:1:exon

position:132424:1
position: 132424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132488:1
position: 132488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:132587-132658:1:exon

position:132587:1
position: 132587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132658:1
position: 132658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:133301-133449:1:exon

position:133301:1
position: 133301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133449:1
position: 133449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:134089-134203:1:exon

position:134089:1
position: 134089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134203:1
position: 134203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:134834-135021:1:exon

position:134834:1
position: 134834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135021:1
position: 135021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:135430-135571:1:exon

position:135430:1
position: 135430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135571:1
position: 135571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:136001-136127:1:exon

position:136001:1
position: 136001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136127:1
position: 136127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:136734-136904:1:exon

position:136734:1
position: 136734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136904:1
position: 136904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:137396-137539:1:exon

position:137396:1
position: 137396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437664
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437664
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 6B
translation: MGVSLPAPPPRAALEPPPGCVRLLPWEPPAEGAAELESVCPGRARAVRLRGLQQAQLWSFPVGPVSPPRSRALPPLQPAWSPPEKRTFPPKRGVQLKRGAPPPEPPPPAPPDELPPPGKRQRSRSPEQVPPPFPLPPQGLWPPQHGDAWTPPPRLGAPLERQFEEPPEFAPILPDGLATIMRMLDESIRQGEDEDGLLPPPSYVSSSDLLKLRALGGEGPPKELKIRLIKVESGGGTGTGPPQNGAIGGGGDTAAEEPQGPPLAQLTIRHSAAEVVRASKQARLKGPFRESYLCPAQSVKPHIDAQEKLPRDKLNPPTPSIYLESKRDAFSPVLLQFCTDPKNPITVIRGLAGSLRLNLGLFSTKTLVQASGEHAVEVRTQVQQPSDQNWDLSGTRQVWPCASSRSHTTIAKYAQYQASSFQEALQEDKDSEDEEAEEPDSTTETPPSSNPDQKSHQIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVSSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISGFCDRHGVDYLTGSWWPVLEDLYSSNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLALERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLYSMIKYCLLQSIKHCQVQRESLVRAGKKITFQARVKDEPAYYCNECDVEVFNILFVTSETGGRNTYLVHCEGCARRRSGALHGVVVLEQYKTEELMNIYDSFTLVPSPSSR
SIO_010081: LOC117437664
subclass of: SO_0000673
so part of: LOC117437664
location: join(122847..122860,122957..123104,124190..124279,124419..124550,125261..125362,126947..127054,127965..128209,128761..128887,129975..130080,131325..131530,132424..132488,132587..132658,133301..133449,134089..134203,134834..135021,135430..135571,136001..136127,136734..136904,137396..137419)
location: region:122847-137419:1
so has part: feature:122847-122860:1:exon
so has part: feature:122957-123104:1:exon
so has part: feature:124190-124279:1:exon
so has part: feature:124419-124550:1:exon
so has part: feature:125261-125362:1:exon
so has part: feature:126947-127054:1:exon
so has part: feature:127965-128209:1:exon
so has part: feature:128761-128887:1:exon
so has part: feature:129975-130080:1:exon
so has part: feature:131325-131530:1:exon
so has part: feature:132424-132488:1:exon
so has part: feature:132587-132658:1:exon
so has part: feature:133301-133449:1:exon
so has part: feature:134089-134203:1:exon
so has part: feature:134834-135021:1:exon
so has part: feature:135430-135571:1:exon
so has part: feature:136001-136127:1:exon
so has part: feature:136734-136904:1:exon
so has part: feature:137396-137419:1:exon

XP_033928109.1
type: Protein
SIO_000068: ncbiprotein

position:137419:1
position: 137419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122847-122860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122957-123104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:124190-124279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:124419-124550:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125261-125362:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126947-127054:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127965-128209:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128761-128887:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129975-130080:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:131325-131530:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132424-132488:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:132587-132658:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:133301-133449:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:134089-134203:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:134834-135021:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:135430-135571:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:136001-136127:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:136734-136904:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:137396-137419:1:exon

LOC117437661
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(138815..147863)
location: region:138815-147863:-1
so has part: feature:138815-147863:-1:exon
subclass of: SO_0000010

117437661
type: Gene
SIO_000068: ncbigene

position:138815:-1
position: 138815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147863:-1
position: 147863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138815-147863:-1:exon

LOC117437661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437661
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072215.1
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138815..138965,139569..139830,140955..141165,146188..146238,147783..147863))
location: region:138815-147863:-1
so has part: feature:147783-147863:-1:exon
so has part: feature:146188-146238:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138815-138965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147783-147863:-1:exon

position:147783:-1
position: 147783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146188-146238:-1:exon

position:146188:-1
position: 146188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146238:-1
position: 146238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140955-141165:-1:exon

position:140955:-1
position: 140955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141165:-1
position: 141165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:139569-139830:-1:exon

position:139569:-1
position: 139569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139830:-1
position: 139830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:138815-138965:-1:exon

position:138965:-1
position: 138965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437661
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072213.1
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138815..138965,139569..139830,140955..141165,146188..146238,147237..147310,147783..147863))
location: region:138815-147863:-1
so has part: feature:147783-147863:-1:exon
so has part: feature:147237-147310:-1:exon
so has part: feature:146188-146238:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138815-138965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147783-147863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147237-147310:-1:exon

position:147237:-1
position: 147237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147310:-1
position: 147310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146188-146238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138815-138965:-1:exon

LOC117437661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437661
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072209.1
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138815..138965,139569..139830,140955..141165,145332..145449,146188..146238,147237..147310,147783..147863))
location: region:138815-147863:-1
so has part: feature:147783-147863:-1:exon
so has part: feature:147237-147310:-1:exon
so has part: feature:146188-146238:-1:exon
so has part: feature:145332-145449:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138815-138965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147783-147863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147237-147310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146188-146238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145332-145449:-1:exon

position:145332:-1
position: 145332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145449:-1
position: 145449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138815-138965:-1:exon

LOC117437661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437661
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072211.1
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138815..138965,139569..139830,140955..141165,145332..145520,146188..146238,147237..147310,147783..147863))
location: region:138815-147863:-1
so has part: feature:147783-147863:-1:exon
so has part: feature:147237-147310:-1:exon
so has part: feature:146188-146238:-1:exon
so has part: feature:145332-145520:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138815-138965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147783-147863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147237-147310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146188-146238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145332-145520:-1:exon

position:145520:-1
position: 145520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138815-138965:-1:exon

LOC117437661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437661
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034072212.1
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138815..138965,139569..139800,140955..141165,145332..145630,146188..146238,147237..147310,147783..147863))
location: region:138815-147863:-1
so has part: feature:147783-147863:-1:exon
so has part: feature:147237-147310:-1:exon
so has part: feature:146188-146238:-1:exon
so has part: feature:145332-145630:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139800:-1:exon
so has part: feature:138815-138965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147783-147863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147237-147310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146188-146238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145332-145630:-1:exon

position:145630:-1
position: 145630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139569-139800:-1:exon

position:139800:-1
position: 139800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:138815-138965:-1:exon

LOC117437661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437661
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072207.1
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138815..138965,139569..139830,140955..141165,145332..145630,146188..146238,147237..147310,147783..147863))
location: region:138815-147863:-1
so has part: feature:147783-147863:-1:exon
so has part: feature:147237-147310:-1:exon
so has part: feature:146188-146238:-1:exon
so has part: feature:145332-145630:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138815-138965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147783-147863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147237-147310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146188-146238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145332-145630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138815-138965:-1:exon

LOC117437661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437661
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072214.1
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138815..138965,139569..139830,140955..141165,146188..146238,147237..147344,147783..147863))
location: region:138815-147863:-1
so has part: feature:147783-147863:-1:exon
so has part: feature:147237-147344:-1:exon
so has part: feature:146188-146238:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138815-138965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147783-147863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147237-147344:-1:exon

position:147344:-1
position: 147344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146188-146238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138815-138965:-1:exon

LOC117437661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437661
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072208.1
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138815..138965,139569..139830,140955..141165,145332..145630,146188..146238,147237..147344,147783..147863))
location: region:138815-147863:-1
so has part: feature:147783-147863:-1:exon
so has part: feature:147237-147344:-1:exon
so has part: feature:146188-146238:-1:exon
so has part: feature:145332-145630:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138815-138965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147783-147863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147237-147344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146188-146238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145332-145630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138815-138965:-1:exon

LOC117437661
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437661
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034072210.1
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138815..138965,139569..139830,140955..141165,145332..145804))
location: region:138815-145804:-1
so has part: feature:145332-145804:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138815-138965:-1:exon

position:145804:-1
position: 145804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145332-145804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138815-138965:-1:exon

LOC117437661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit isoform X3
translation: MAQTSSSAAMMVSMATPRPEVPPVPMATPRPELPVVAMTTPRTPEVSAVATATGPEVPPLRGGCWEAAPAMAEAADAVGDPVLPQPPGAGVGVAPGAVSVPVSVPVPVSVPVPRSRRLLESLLNRSLRIRMSDGRTLVGAFLCTDRDANVILGSAQEFLKAADAFPGSEPRVLGLAMVPGHHIVSIEVEREGTGTPPLPPPGPPH
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138835..138965,139569..139830,140955..141165,146188..146201))
location: region:138835-146201:-1
so has part: feature:146188-146201:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138835-138965:-1:exon

XP_033928104.1
type: Protein
SIO_000068: ncbiprotein

position:138835:-1
position: 138835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146201:-1
position: 146201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146188-146201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138835-138965:-1:exon

LOC117437661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit isoform X3
translation: MAQTSSSAAMMVSMATPRPEVPPVPMATPRPELPVVAMTTPRTPEVSAVATATGPEVPPLRGGCWEAAPAMAEAADAVGDPVLPQPPGAGVGVAPGAVSVPVSVPVPVSVPVPRSRRLLESLLNRSLRIRMSDGRTLVGAFLCTDRDANVILGSAQEFLKAADAFPGSEPRVLGLAMVPGHHIVSIEVEREGTGTPPLPPPGPPH
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138835..138965,139569..139830,140955..141165,146188..146201))
location: region:138835-146201:-1
so has part: feature:146188-146201:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138835-138965:-1:exon

XP_033928105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146188-146201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138835-138965:-1:exon

LOC117437661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit isoform X3
translation: MAQTSSSAAMMVSMATPRPEVPPVPMATPRPELPVVAMTTPRTPEVSAVATATGPEVPPLRGGCWEAAPAMAEAADAVGDPVLPQPPGAGVGVAPGAVSVPVSVPVPVSVPVPRSRRLLESLLNRSLRIRMSDGRTLVGAFLCTDRDANVILGSAQEFLKAADAFPGSEPRVLGLAMVPGHHIVSIEVEREGTGTPPLPPPGPPH
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138835..138965,139569..139830,140955..141165,146188..146201))
location: region:138835-146201:-1
so has part: feature:146188-146201:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138835-138965:-1:exon

XP_033928106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146188-146201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138835-138965:-1:exon

LOC117437661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit isoform X2
translation: MDTRTGRHMDRRQEHCEPPQGGVSSSAAMMVSMATPRPEVPPVPMATPRPELPVVAMTTPRTPEVSAVATATGPEVPPLRGGCWEAAPAMAEAAPPGAGVGVAPGAVSVPVSVPVPVSVPVPRSRRLLESLLNRSLRIRMSDGRTLVGAFLCTDRDANVILGSAQEFLKAADAFPGSEPRVLGLAMVPGHHIVSIEVEREGTGTPPLPPPGPPH
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138835..138965,139569..139800,140955..141165,145332..145402))
location: region:138835-145402:-1
so has part: feature:145332-145402:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139800:-1:exon
so has part: feature:138835-138965:-1:exon

XP_033928103.1
type: Protein
SIO_000068: ncbiprotein

position:145402:-1
position: 145402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145332-145402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139569-139800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138835-138965:-1:exon

LOC117437661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit isoform X1
translation: MDTRTGRHMDRRQEHCEPPQGGVSSSAAMMVSMATPRPEVPPVPMATPRPELPVVAMTTPRTPEVSAVATATGPEVPPLRGGCWEAAPAMAEAADAVGDPVLPQPPGAGVGVAPGAVSVPVSVPVPVSVPVPRSRRLLESLLNRSLRIRMSDGRTLVGAFLCTDRDANVILGSAQEFLKAADAFPGSEPRVLGLAMVPGHHIVSIEVEREGTGTPPLPPPGPPH
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138835..138965,139569..139830,140955..141165,145332..145402))
location: region:138835-145402:-1
so has part: feature:145332-145402:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138835-138965:-1:exon

XP_033928098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145332-145402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138835-138965:-1:exon

LOC117437661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit isoform X1
translation: MDTRTGRHMDRRQEHCEPPQGGVSSSAAMMVSMATPRPEVPPVPMATPRPELPVVAMTTPRTPEVSAVATATGPEVPPLRGGCWEAAPAMAEAADAVGDPVLPQPPGAGVGVAPGAVSVPVSVPVPVSVPVPRSRRLLESLLNRSLRIRMSDGRTLVGAFLCTDRDANVILGSAQEFLKAADAFPGSEPRVLGLAMVPGHHIVSIEVEREGTGTPPLPPPGPPH
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138835..138965,139569..139830,140955..141165,145332..145402))
location: region:138835-145402:-1
so has part: feature:145332-145402:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138835-138965:-1:exon

XP_033928099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145332-145402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138835-138965:-1:exon

LOC117437661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit isoform X1
translation: MDTRTGRHMDRRQEHCEPPQGGVSSSAAMMVSMATPRPEVPPVPMATPRPELPVVAMTTPRTPEVSAVATATGPEVPPLRGGCWEAAPAMAEAADAVGDPVLPQPPGAGVGVAPGAVSVPVSVPVPVSVPVPRSRRLLESLLNRSLRIRMSDGRTLVGAFLCTDRDANVILGSAQEFLKAADAFPGSEPRVLGLAMVPGHHIVSIEVEREGTGTPPLPPPGPPH
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138835..138965,139569..139830,140955..141165,145332..145402))
location: region:138835-145402:-1
so has part: feature:145332-145402:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138835-138965:-1:exon

XP_033928100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145332-145402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138835-138965:-1:exon

LOC117437661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit isoform X1
translation: MDTRTGRHMDRRQEHCEPPQGGVSSSAAMMVSMATPRPEVPPVPMATPRPELPVVAMTTPRTPEVSAVATATGPEVPPLRGGCWEAAPAMAEAADAVGDPVLPQPPGAGVGVAPGAVSVPVSVPVPVSVPVPRSRRLLESLLNRSLRIRMSDGRTLVGAFLCTDRDANVILGSAQEFLKAADAFPGSEPRVLGLAMVPGHHIVSIEVEREGTGTPPLPPPGPPH
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138835..138965,139569..139830,140955..141165,145332..145402))
location: region:138835-145402:-1
so has part: feature:145332-145402:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138835-138965:-1:exon

XP_033928101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145332-145402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138835-138965:-1:exon

LOC117437661
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit isoform X1
translation: MDTRTGRHMDRRQEHCEPPQGGVSSSAAMMVSMATPRPEVPPVPMATPRPELPVVAMTTPRTPEVSAVATATGPEVPPLRGGCWEAAPAMAEAADAVGDPVLPQPPGAGVGVAPGAVSVPVSVPVPVSVPVPRSRRLLESLLNRSLRIRMSDGRTLVGAFLCTDRDANVILGSAQEFLKAADAFPGSEPRVLGLAMVPGHHIVSIEVEREGTGTPPLPPPGPPH
SIO_010081: LOC117437661
subclass of: SO_0000673
so part of: LOC117437661
location: complement(join(138835..138965,139569..139830,140955..141165,145332..145402))
location: region:138835-145402:-1
so has part: feature:145332-145402:-1:exon
so has part: feature:140955-141165:-1:exon
so has part: feature:139569-139830:-1:exon
so has part: feature:138835-138965:-1:exon

XP_033928102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145332-145402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140955-141165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139569-139830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138835-138965:-1:exon

LOC117437662
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437662
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 141932..145022
location: region:141932-145022:1
so has part: feature:141932-145022:1:exon
subclass of: SO_0000011

117437662
type: Gene
SIO_000068: ncbigene

position:141932:1
position: 141932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145022:1
position: 145022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141932-145022:1:exon

LOC117437662
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437662
product: uncharacterized LOC117437662
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004550487.1
SIO_010081: LOC117437662
subclass of: SO_0000673
so part of: LOC117437662
location: join(141932..142011,143988..144176,144912..145022)
location: region:141932-145022:1
so has part: feature:141932-142011:1:exon
so has part: feature:143988-144176:1:exon
so has part: feature:144912-145022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141932-142011:1:exon

position:142011:1
position: 142011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143988-144176:1:exon

position:143988:1
position: 143988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144176:1
position: 144176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144912-145022:1:exon

position:144912:1
position: 144912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101881272
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101881272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 147444..184410
location: region:147444-184410:1
so has part: feature:147444-184410:1:exon
subclass of: SO_0000010

101881272
type: Gene
SIO_000068: ncbigene

position:147444:1
position: 147444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184410:1
position: 184410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147444-184410:1:exon

LOC101881272
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881272
product: chromodomain helicase DNA binding protein 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072206.1
SIO_010081: LOC101881272
subclass of: SO_0000673
so part of: LOC101881272
location: join(147444..147589,148057..148376,152975..153093,153972..154164,154622..154746,155312..155550,156346..156476,157040..157175,157862..157915,158635..158813,159443..159673,160434..160631,161022..161236,161771..161902,162172..162271,162724..162915,163750..163950,164504..164641,165312..165433,165802..165975,166576..166717,167124..167255,168046..168163,169091..169215,169904..170135,170726..170892,171362..171539,171911..171976,172377..172462,173205..173338,174414..174558,175474..175621,176141..176247,176338..176476,177220..177306,177565..177678,178188..178296,179514..179646,181055..181250,182800..182963,183519..183645,184306..184410)
location: region:147444-184410:1
so has part: feature:147444-147589:1:exon
so has part: feature:148057-148376:1:exon
so has part: feature:152975-153093:1:exon
so has part: feature:153972-154164:1:exon
so has part: feature:154622-154746:1:exon
so has part: feature:155312-155550:1:exon
so has part: feature:156346-156476:1:exon
so has part: feature:157040-157175:1:exon
so has part: feature:157862-157915:1:exon
so has part: feature:158635-158813:1:exon
so has part: feature:159443-159673:1:exon
so has part: feature:160434-160631:1:exon
so has part: feature:161022-161236:1:exon
so has part: feature:161771-161902:1:exon
so has part: feature:162172-162271:1:exon
so has part: feature:162724-162915:1:exon
so has part: feature:163750-163950:1:exon
so has part: feature:164504-164641:1:exon
so has part: feature:165312-165433:1:exon
so has part: feature:165802-165975:1:exon
so has part: feature:166576-166717:1:exon
so has part: feature:167124-167255:1:exon
so has part: feature:168046-168163:1:exon
so has part: feature:169091-169215:1:exon
so has part: feature:169904-170135:1:exon
so has part: feature:170726-170892:1:exon
so has part: feature:171362-171539:1:exon
so has part: feature:171911-171976:1:exon
so has part: feature:172377-172462:1:exon
so has part: feature:173205-173338:1:exon
so has part: feature:174414-174558:1:exon
so has part: feature:175474-175621:1:exon
so has part: feature:176141-176247:1:exon
so has part: feature:176338-176476:1:exon
so has part: feature:177220-177306:1:exon
so has part: feature:177565-177678:1:exon
so has part: feature:178188-178296:1:exon
so has part: feature:179514-179646:1:exon
so has part: feature:181055-181250:1:exon
so has part: feature:182800-182963:1:exon
so has part: feature:183519-183645:1:exon
so has part: feature:184306-184410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147444-147589:1:exon

position:147589:1
position: 147589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148057-148376:1:exon

position:148057:1
position: 148057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148376:1
position: 148376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152975-153093:1:exon

position:152975:1
position: 152975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153093:1
position: 153093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:153972-154164:1:exon

position:153972:1
position: 153972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154164:1
position: 154164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:154622-154746:1:exon

position:154622:1
position: 154622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154746:1
position: 154746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:155312-155550:1:exon

position:155312:1
position: 155312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155550:1
position: 155550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:156346-156476:1:exon

position:156346:1
position: 156346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156476:1
position: 156476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:157040-157175:1:exon

position:157040:1
position: 157040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157175:1
position: 157175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:157862-157915:1:exon

position:157862:1
position: 157862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157915:1
position: 157915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:158635-158813:1:exon

position:158635:1
position: 158635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158813:1
position: 158813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:159443-159673:1:exon

position:159443:1
position: 159443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159673:1
position: 159673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:160434-160631:1:exon

position:160434:1
position: 160434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160631:1
position: 160631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:161022-161236:1:exon

position:161022:1
position: 161022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161236:1
position: 161236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:161771-161902:1:exon

position:161771:1
position: 161771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161902:1
position: 161902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:162172-162271:1:exon

position:162172:1
position: 162172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162271:1
position: 162271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:162724-162915:1:exon

position:162724:1
position: 162724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162915:1
position: 162915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:163750-163950:1:exon

position:163750:1
position: 163750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163950:1
position: 163950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:164504-164641:1:exon

position:164504:1
position: 164504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164641:1
position: 164641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:165312-165433:1:exon

position:165312:1
position: 165312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165433:1
position: 165433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:165802-165975:1:exon

position:165802:1
position: 165802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165975:1
position: 165975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:166576-166717:1:exon

position:166576:1
position: 166576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166717:1
position: 166717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:167124-167255:1:exon

position:167124:1
position: 167124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167255:1
position: 167255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:168046-168163:1:exon

position:168046:1
position: 168046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168163:1
position: 168163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:169091-169215:1:exon

position:169091:1
position: 169091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169215:1
position: 169215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:169904-170135:1:exon

position:169904:1
position: 169904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170135:1
position: 170135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:170726-170892:1:exon

position:170726:1
position: 170726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170892:1
position: 170892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:171362-171539:1:exon

position:171362:1
position: 171362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171539:1
position: 171539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:171911-171976:1:exon

position:171911:1
position: 171911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171976:1
position: 171976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:172377-172462:1:exon

position:172377:1
position: 172377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172462:1
position: 172462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:173205-173338:1:exon

position:173205:1
position: 173205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173338:1
position: 173338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:174414-174558:1:exon

position:174414:1
position: 174414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174558:1
position: 174558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:175474-175621:1:exon

position:175474:1
position: 175474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175621:1
position: 175621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:176141-176247:1:exon

position:176141:1
position: 176141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176247:1
position: 176247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:176338-176476:1:exon

position:176338:1
position: 176338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176476:1
position: 176476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:177220-177306:1:exon

position:177220:1
position: 177220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177306:1
position: 177306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:177565-177678:1:exon

position:177565:1
position: 177565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177678:1
position: 177678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:178188-178296:1:exon

position:178188:1
position: 178188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178296:1
position: 178296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:179514-179646:1:exon

position:179514:1
position: 179514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179646:1
position: 179646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:181055-181250:1:exon

position:181055:1
position: 181055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181250:1
position: 181250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:182800-182963:1:exon

position:182800:1
position: 182800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182963:1
position: 182963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:183519-183645:1:exon

position:183519:1
position: 183519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183645:1
position: 183645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:184306-184410:1:exon

position:184306:1
position: 184306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101881272
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881272
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 3
translation: MASPLREDEEDEEEMAVSEGEEEEEEDEEDDEEEDEDEDDAAAMLGGSGGLRGGPGADMFPPAPVPPVPPVPPPVPPPVPSVPPAPAQPLPPPQAALPAPGVHTEGAEELLRGLEGALGVKKKKRGPRKQKENKPGKPRKRKKLGSEDELESEREEFPRQEYRDKSESGGSESGGGGNRKRRRKHRDKKDKKTKRRKKADEEGGQKVKAVEQKSSAQLLGAWGLEDVDHVFTEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVGNGGTEAPAPPLRKAKTKEGKGPGHKKRSRSPRVPELKRKLKGRRMAPLKIKLGVLGGKRKKSSSSEDAGEAEDDSDAESPGVPGAPPRPDPSPRLKKLKRGRPGRKKKKAGLGRERGPVGTGTAPGHGPGAEDDADGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGRWSCPHCEKEGVQWEAKEEEEEEEEEEEEGEKEEEDDHMEYCRVCKDGGELLCCDACVSSYHIHCLNPPLPEVPNGEWLCPRCTCPVLKGRVQKILYWRWGEPPPPRGPPRSPPPPEGPPQALQGRSEREFFVKWVGLSYWHCSWIKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGDDDPKSEKRGAGGDPLFGGMEERFYRYGIKPEWMTVHRIINHSVDRKGQYHYLVKWRDLPYDQATWEEDEMPIPDYDLHKLAYWKHREVFMGEDPAQPRRYKKKKKETPGEGPPDSPTNDPTVKYESQPRFITATGGTLHLYQLEGLNWLRFSWAQSTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPAFYVVTYTGDKDSRAIIRENEFSFDDNAMKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIEHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLLLLQKMLRKLKEQNHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVVIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDDNEGDNKEEDSSVIHYDNEAIARLLDRNQDATDDADVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTSQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGSDTFADGVPREGLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSLPELAPEPCPESHRSSRASSPARTEHSAANSPAPHTPATPAPSERGEGTGPPQDLGESREEKETKGGEKMDTEAPAPELPPSPGDGSEAEGMLKGKEEEEGAGHREPEAEGTPAREERGGPDPAADKGDERAADEDPKERPGDPDPKREELKADKEPKAEPRPNGRREDKAEKPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRHDYWLLAGIVLHGYARWTDIQNDGAFGVINEPFKGEASKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTESHPPPTFPPGPYATPQTYGGTFGTAPPGALPPGG…
SIO_010081: LOC101881272
subclass of: SO_0000673
so part of: LOC101881272
location: join(148064..148376,152975..153093,153972..154164,154622..154746,155312..155550,156346..156476,157040..157175,157862..157915,158635..158813,159443..159673,160434..160631,161022..161236,161771..161902,162172..162271,162724..162915,163750..163950,164504..164641,165312..165433,165802..165975,166576..166717,167124..167255,168046..168163,169091..169215,169904..170135,170726..170892,171362..171539,171911..171976,172377..172462,173205..173338,174414..174558,175474..175621,176141..176247,176338..176476,177220..177306,177565..177678,178188..178296,179514..179646,181055..181250,182800..182963,183519..183645,184306..184409)
location: region:148064-184409:1
so has part: feature:148064-148376:1:exon
so has part: feature:152975-153093:1:exon
so has part: feature:153972-154164:1:exon
so has part: feature:154622-154746:1:exon
so has part: feature:155312-155550:1:exon
so has part: feature:156346-156476:1:exon
so has part: feature:157040-157175:1:exon
so has part: feature:157862-157915:1:exon
so has part: feature:158635-158813:1:exon
so has part: feature:159443-159673:1:exon
so has part: feature:160434-160631:1:exon
so has part: feature:161022-161236:1:exon
so has part: feature:161771-161902:1:exon
so has part: feature:162172-162271:1:exon
so has part: feature:162724-162915:1:exon
so has part: feature:163750-163950:1:exon
so has part: feature:164504-164641:1:exon
so has part: feature:165312-165433:1:exon
so has part: feature:165802-165975:1:exon
so has part: feature:166576-166717:1:exon
so has part: feature:167124-167255:1:exon
so has part: feature:168046-168163:1:exon
so has part: feature:169091-169215:1:exon
so has part: feature:169904-170135:1:exon
so has part: feature:170726-170892:1:exon
so has part: feature:171362-171539:1:exon
so has part: feature:171911-171976:1:exon
so has part: feature:172377-172462:1:exon
so has part: feature:173205-173338:1:exon
so has part: feature:174414-174558:1:exon
so has part: feature:175474-175621:1:exon
so has part: feature:176141-176247:1:exon
so has part: feature:176338-176476:1:exon
so has part: feature:177220-177306:1:exon
so has part: feature:177565-177678:1:exon
so has part: feature:178188-178296:1:exon
so has part: feature:179514-179646:1:exon
so has part: feature:181055-181250:1:exon
so has part: feature:182800-182963:1:exon
so has part: feature:183519-183645:1:exon
so has part: feature:184306-184409:1:exon

XP_033928097.1
type: Protein
SIO_000068: ncbiprotein

position:148064:1
position: 148064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184409:1
position: 184409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148064-148376:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152975-153093:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153972-154164:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:154622-154746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:155312-155550:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156346-156476:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157040-157175:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:157862-157915:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158635-158813:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:159443-159673:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:160434-160631:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:161022-161236:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:161771-161902:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:162172-162271:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:162724-162915:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:163750-163950:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:164504-164641:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:165312-165433:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:165802-165975:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:166576-166717:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:167124-167255:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:168046-168163:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:169091-169215:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:169904-170135:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:170726-170892:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:171362-171539:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:171911-171976:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:172377-172462:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:173205-173338:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:174414-174558:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:175474-175621:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:176141-176247:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:176338-176476:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:177220-177306:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:177565-177678:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:178188-178296:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:179514-179646:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:181055-181250:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:182800-182963:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:183519-183645:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:184306-184409:1:exon

LOC115946999
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115946999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(186276..188231)
location: region:186276-188231:-1
so has part: feature:186276-188231:-1:exon
subclass of: SO_0000010

115946999
type: Gene
SIO_000068: ncbigene

position:186276:-1
position: 186276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188231:-1
position: 188231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186276-188231:-1:exon

LOC115946999
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115946999
product: coiled-coil domain containing 81
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072219.1
SIO_010081: LOC115946999
subclass of: SO_0000673
so part of: LOC115946999
location: complement(join(186276..186403,186565..186692,186790..186875,187364..187620,188174..188231))
location: region:186276-188231:-1
so has part: feature:188174-188231:-1:exon
so has part: feature:187364-187620:-1:exon
so has part: feature:186790-186875:-1:exon
so has part: feature:186565-186692:-1:exon
so has part: feature:186276-186403:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188174-188231:-1:exon

position:188174:-1
position: 188174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:187364-187620:-1:exon

position:187364:-1
position: 187364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187620:-1
position: 187620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:186790-186875:-1:exon

position:186790:-1
position: 186790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186875:-1
position: 186875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186565-186692:-1:exon

position:186565:-1
position: 186565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186692:-1
position: 186692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:186276-186403:-1:exon

position:186403:-1
position: 186403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115946999
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115946999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 81
translation: MAQIHNLMDNKDYAPSHKELEPLKYSQVASSIPSSRREVERCVQGTLSLLSYCLGQGEAVALVLKDLGVLLVQGSRVSVRFYSHFLEQLMGNWSLEGDGDKVSHLLDSGMSPSDPVSSLSTSGRVLIFPTFGIALETPRFPKDPLKSLGSAGGDKEMGMGMGTSPAPDEAMGVGSPGVPIPGVPIPGVPIPGVPIPMAGDGQEEATGMKKAQVR
SIO_010081: LOC115946999
subclass of: SO_0000673
so part of: LOC115946999
location: complement(join(186276..186403,186565..186692,186790..186875,187364..187620,188174..188219))
location: region:186276-188219:-1
so has part: feature:188174-188219:-1:exon
so has part: feature:187364-187620:-1:exon
so has part: feature:186790-186875:-1:exon
so has part: feature:186565-186692:-1:exon
so has part: feature:186276-186403:-1:exon

XP_033928110.1
type: Protein
SIO_000068: ncbiprotein

position:188219:-1
position: 188219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188174-188219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187364-187620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186790-186875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186565-186692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186276-186403:-1:exon

LOC117437682
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190868..197890)
location: region:190868-197890:-1
so has part: feature:190868-197890:-1:exon
subclass of: SO_0000010

117437682
type: Gene
SIO_000068: ncbigene

position:190868:-1
position: 190868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197890:-1
position: 197890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190868-197890:-1:exon

LOC117437682
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437682
product: potassium voltage-gated channel subfamily A regulatory beta subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072249.1
SIO_010081: LOC117437682
subclass of: SO_0000673
so part of: LOC117437682
location: complement(join(190868..191231,192401..192488,192632..192717,193226..193319,193796..193881,195543..195580,195806..195850,196287..196331,196433..196494,196855..196892,197313..197356,197813..197890))
location: region:190868-197890:-1
so has part: feature:197813-197890:-1:exon
so has part: feature:197313-197356:-1:exon
so has part: feature:196855-196892:-1:exon
so has part: feature:196433-196494:-1:exon
so has part: feature:196287-196331:-1:exon
so has part: feature:195806-195850:-1:exon
so has part: feature:195543-195580:-1:exon
so has part: feature:193796-193881:-1:exon
so has part: feature:193226-193319:-1:exon
so has part: feature:192632-192717:-1:exon
so has part: feature:192401-192488:-1:exon
so has part: feature:190868-191231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197813-197890:-1:exon

position:197813:-1
position: 197813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197313-197356:-1:exon

position:197313:-1
position: 197313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197356:-1
position: 197356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196855-196892:-1:exon

position:196855:-1
position: 196855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196892:-1
position: 196892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:196433-196494:-1:exon

position:196433:-1
position: 196433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196494:-1
position: 196494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196287-196331:-1:exon

position:196287:-1
position: 196287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196331:-1
position: 196331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:195806-195850:-1:exon

position:195806:-1
position: 195806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195850:-1
position: 195850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:195543-195580:-1:exon

position:195543:-1
position: 195543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195580:-1
position: 195580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:193796-193881:-1:exon

position:193796:-1
position: 193796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193881:-1
position: 193881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:193226-193319:-1:exon

position:193226:-1
position: 193226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193319:-1
position: 193319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:192632-192717:-1:exon

position:192632:-1
position: 192632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192717:-1
position: 192717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:192401-192488:-1:exon

position:192401:-1
position: 192401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192488:-1
position: 192488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:190868-191231:-1:exon

position:191231:-1
position: 191231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437682
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437682
product: potassium voltage-gated channel subfamily A regulatory beta subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072248.1
SIO_010081: LOC117437682
subclass of: SO_0000673
so part of: LOC117437682
location: complement(join(190868..191231,192401..192488,192632..192717,193226..193319,193796..193881,194750..194836,195543..195580,195806..195850,196287..196331,196433..196494,196855..196892,197313..197356,197813..197890))
location: region:190868-197890:-1
so has part: feature:197813-197890:-1:exon
so has part: feature:197313-197356:-1:exon
so has part: feature:196855-196892:-1:exon
so has part: feature:196433-196494:-1:exon
so has part: feature:196287-196331:-1:exon
so has part: feature:195806-195850:-1:exon
so has part: feature:195543-195580:-1:exon
so has part: feature:194750-194836:-1:exon
so has part: feature:193796-193881:-1:exon
so has part: feature:193226-193319:-1:exon
so has part: feature:192632-192717:-1:exon
so has part: feature:192401-192488:-1:exon
so has part: feature:190868-191231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197813-197890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197313-197356:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196855-196892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196433-196494:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196287-196331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195806-195850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195543-195580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194750-194836:-1:exon

position:194750:-1
position: 194750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194836:-1
position: 194836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:193796-193881:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193226-193319:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192632-192717:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192401-192488:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190868-191231:-1:exon

LOC117437682
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-gated potassium channel subunit beta-3 isoform X2
translation: MKYRTLGRSGLRVSCIGLGIQGTFGAGISDEVLTAAYDSGVTLYDVTEASGRAEKMLGEVLRSKGWRRSSYVITTRVFWGGQADRSLSRKQVLEELVRVMSDVIDRGLALYWGTAGGAPNDVMDTFAVARQFNLVAPVCQWAELPPEPRLFRQLGLGAVTWSPLAPGPALQEEQLPHGRPIGKAMGHRKPLNPADLQPLAQRLGCSVSQLGIGPAQPQPHSPTGARPPAGGSGASIGPAPHLPLAASRMSPAPPHPIPAPRPAPPANGVAGGRGLPSSCSPSPSRGRGHVTIEQ
SIO_010081: LOC117437682
subclass of: SO_0000673
so part of: LOC117437682
location: complement(join(190984..191231,192401..192488,192632..192717,193226..193319,193796..193881,195543..195580,195806..195850,196287..196331,196433..196494,196855..196892,197313..197356,197813..197823))
location: region:190984-197823:-1
so has part: feature:197813-197823:-1:exon
so has part: feature:197313-197356:-1:exon
so has part: feature:196855-196892:-1:exon
so has part: feature:196433-196494:-1:exon
so has part: feature:196287-196331:-1:exon
so has part: feature:195806-195850:-1:exon
so has part: feature:195543-195580:-1:exon
so has part: feature:193796-193881:-1:exon
so has part: feature:193226-193319:-1:exon
so has part: feature:192632-192717:-1:exon
so has part: feature:192401-192488:-1:exon
so has part: feature:190984-191231:-1:exon

XP_033928140.1
type: Protein
SIO_000068: ncbiprotein

position:190984:-1
position: 190984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197823:-1
position: 197823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197813-197823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197313-197356:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196855-196892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196433-196494:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196287-196331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195806-195850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195543-195580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193796-193881:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193226-193319:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192632-192717:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192401-192488:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190984-191231:-1:exon

LOC117437682
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-gated potassium channel subunit beta-3 isoform X1
translation: MKYRTLGRSGLRVSCIGLGIQGTFGAGISDEVLTAAYDSGVTLYDVTEASGRAEKMLGEVLRSKGWRRSSYVITTRVFWGGQADRSLSRKQVLEGLQGSLQRLQLDYVDVIFAGPRPGPAHTEELVRVMSDVIDRGLALYWGTAGGAPNDVMDTFAVARQFNLVAPVCQWAELPPEPRLFRQLGLGAVTWSPLAPGPALQEEQLPHGRPIGKAMGHRKPLNPADLQPLAQRLGCSVSQLGIGPAQPQPHSPTGARPPAGGSGASIGPAPHLPLAASRMSPAPPHPIPAPRPAPPANGVAGGRGLPSSCSPSPSRGRGHVTIEQ
SIO_010081: LOC117437682
subclass of: SO_0000673
so part of: LOC117437682
location: complement(join(190984..191231,192401..192488,192632..192717,193226..193319,193796..193881,194750..194836,195543..195580,195806..195850,196287..196331,196433..196494,196855..196892,197313..197356,197813..197823))
location: region:190984-197823:-1
so has part: feature:197813-197823:-1:exon
so has part: feature:197313-197356:-1:exon
so has part: feature:196855-196892:-1:exon
so has part: feature:196433-196494:-1:exon
so has part: feature:196287-196331:-1:exon
so has part: feature:195806-195850:-1:exon
so has part: feature:195543-195580:-1:exon
so has part: feature:194750-194836:-1:exon
so has part: feature:193796-193881:-1:exon
so has part: feature:193226-193319:-1:exon
so has part: feature:192632-192717:-1:exon
so has part: feature:192401-192488:-1:exon
so has part: feature:190984-191231:-1:exon

XP_033928139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197813-197823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197313-197356:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196855-196892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196433-196494:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196287-196331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195806-195850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195543-195580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194750-194836:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193796-193881:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193226-193319:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192632-192717:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192401-192488:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190984-191231:-1:exon

LOC117437680
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 200154..207265
location: region:200154-207265:1
so has part: feature:200154-207265:1:exon
subclass of: SO_0000010

117437680
type: Gene
SIO_000068: ncbigene

position:200154:1
position: 200154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207265:1
position: 207265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200154-207265:1:exon

LOC117437680
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437680
product: ATPase Na+/K+ transporting subunit beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072246.1
SIO_010081: LOC117437680
subclass of: SO_0000673
so part of: LOC117437680
location: join(200154..200396,201724..201852,202435..202539,203345..203556,204303..204359,205917..206015,207070..207265)
location: region:200154-207265:1
so has part: feature:200154-200396:1:exon
so has part: feature:201724-201852:1:exon
so has part: feature:202435-202539:1:exon
so has part: feature:203345-203556:1:exon
so has part: feature:204303-204359:1:exon
so has part: feature:205917-206015:1:exon
so has part: feature:207070-207265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200154-200396:1:exon

position:200396:1
position: 200396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201724-201852:1:exon

position:201724:1
position: 201724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201852:1
position: 201852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202435-202539:1:exon

position:202435:1
position: 202435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202539:1
position: 202539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:203345-203556:1:exon

position:203345:1
position: 203345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203556:1
position: 203556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:204303-204359:1:exon

position:204303:1
position: 204303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204359:1
position: 204359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:205917-206015:1:exon

position:205917:1
position: 205917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206015:1
position: 206015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:207070-207265:1:exon

position:207070:1
position: 207070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-2
translation: MARDKEKRSCGQVWAEWKAFVWDPRTRQLLGRTASSWGLILLFYLVFYGFLAGLFALTMWVMLQSVDPHVPKYQDRLLTPGMMIRPYAEGLDVTFNVSQRHTWMPYVHALHQFLEPYNDSLQAARNAACTPGRYHEQPDDGVPNVPKRACRFNRSSLGPCAGLGPPHSETYGYGTGQPCVLVKINRVINYFPGANKSINVVCAAKDEEDAALLGPLHLFPPNGSIDLMYFPYYGKRVHVNYTQPVVAVQFANATAGVQHHVECRLRALGMRGEGAEPQRDRFAGRVEFRLRLHRE
SIO_010081: LOC117437680
subclass of: SO_0000673
so part of: LOC117437680
location: join(200285..200396,201724..201852,202435..202539,203345..203556,204303..204359,205917..206015,207070..207243)
location: region:200285-207243:1
so has part: feature:200285-200396:1:exon
so has part: feature:201724-201852:1:exon
so has part: feature:202435-202539:1:exon
so has part: feature:203345-203556:1:exon
so has part: feature:204303-204359:1:exon
so has part: feature:205917-206015:1:exon
so has part: feature:207070-207243:1:exon

XP_033928137.1
type: Protein
SIO_000068: ncbiprotein

position:200285:1
position: 200285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207243:1
position: 207243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200285-200396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201724-201852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202435-202539:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203345-203556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204303-204359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205917-206015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207070-207243:1:exon

LOC117437684
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 208936..213166
location: region:208936-213166:1
so has part: feature:208936-213166:1:exon
subclass of: SO_0000010

117437684
type: Gene
SIO_000068: ncbigene

position:208936:1
position: 208936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213166:1
position: 213166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208936-213166:1:exon

LOC117437684
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437684
product: mannose-P-dolichol utilization defect 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072252.1
SIO_010081: LOC117437684
subclass of: SO_0000673
so part of: LOC117437684
location: join(208936..209042,209415..209480,210587..210719,211052..211137,211469..211587,212377..212487,213028..213166)
location: region:208936-213166:1
so has part: feature:208936-209042:1:exon
so has part: feature:209415-209480:1:exon
so has part: feature:210587-210719:1:exon
so has part: feature:211052-211137:1:exon
so has part: feature:211469-211587:1:exon
so has part: feature:212377-212487:1:exon
so has part: feature:213028-213166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208936-209042:1:exon

position:209042:1
position: 209042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209415-209480:1:exon

position:209415:1
position: 209415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209480:1
position: 209480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210587-210719:1:exon

position:210587:1
position: 210587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210719:1
position: 210719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:211052-211137:1:exon

position:211052:1
position: 211052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211137:1
position: 211137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:211469-211587:1:exon

position:211469:1
position: 211469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211587:1
position: 211587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212377-212487:1:exon

position:212377:1
position: 212377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212487:1
position: 212487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:213028-213166:1:exon

position:213028:1
position: 213028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437684
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannose-P-dolichol utilization defect 1 protein isoform X1
translation: MEALRAWLVPGLMPESCFEELVMRLQPMHVPCLRILVSKVLGYGIVAGSVLVKLPQVLQVLGSRSGSGLSIPGLLLELLALVGSVAYGCSRAFPFSAWGEALFLLLQTMALGFLIQHYGGHTGRGLLLVASYWLLLGALLSPQAPPWVVTFLQGANLPIIILSRLLQAATNYRQGHTGQLSGLSTLLLFGGALARVFTSLQETGDPLLALTFASSAACNGLLLGQLLYYRGGHSPKPPPRPKMD
SIO_010081: LOC117437684
subclass of: SO_0000673
so part of: LOC117437684
location: join(208955..209042,209415..209480,210587..210719,211052..211137,211469..211587,212377..212487,213028..213159)
location: region:208955-213159:1
so has part: feature:208955-209042:1:exon
so has part: feature:209415-209480:1:exon
so has part: feature:210587-210719:1:exon
so has part: feature:211052-211137:1:exon
so has part: feature:211469-211587:1:exon
so has part: feature:212377-212487:1:exon
so has part: feature:213028-213159:1:exon

XP_033928143.1
type: Protein
SIO_000068: ncbiprotein

position:208955:1
position: 208955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213159:1
position: 213159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208955-209042:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209415-209480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210587-210719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211052-211137:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211469-211587:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212377-212487:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213028-213159:1:exon

LOC117437684
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437684
product: mannose-P-dolichol utilization defect 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072253.1
SIO_010081: LOC117437684
subclass of: SO_0000673
so part of: LOC117437684
location: join(209415..209480,210592..210719,211052..211137,211469..211587,212377..212487,213028..213166)
location: region:209415-213166:1
so has part: feature:209415-209480:1:exon
so has part: feature:210592-210719:1:exon
so has part: feature:211052-211137:1:exon
so has part: feature:211469-211587:1:exon
so has part: feature:212377-212487:1:exon
so has part: feature:213028-213166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209415-209480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210592-210719:1:exon

position:210592:1
position: 210592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:211052-211137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211469-211587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212377-212487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213028-213166:1:exon

LOC117437684
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannose-P-dolichol utilization defect 1 protein isoform X2
translation: MESWPDPSWLPQVLQVLGSRSGSGLSIPGLLLELLALVGSVAYGCSRAFPFSAWGEALFLLLQTMALGFLIQHYGGHTGRGLLLVASYWLLLGALLSPQAPPWVVTFLQGANLPIIILSRLLQAATNYRQGHTGQLSGLSTLLLFGGALARVFTSLQETGDPLLALTFASSAACNGLLLGQLLYYRGGHSPKPPPRPKMD
SIO_010081: LOC117437684
subclass of: SO_0000673
so part of: LOC117437684
location: join(209454..209480,210592..210719,211052..211137,211469..211587,212377..212487,213028..213159)
location: region:209454-213159:1
so has part: feature:209454-209480:1:exon
so has part: feature:210592-210719:1:exon
so has part: feature:211052-211137:1:exon
so has part: feature:211469-211587:1:exon
so has part: feature:212377-212487:1:exon
so has part: feature:213028-213159:1:exon

XP_033928144.1
type: Protein
SIO_000068: ncbiprotein

position:209454:1
position: 209454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209454-209480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210592-210719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211052-211137:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211469-211587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212377-212487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213028-213159:1:exon

LOC117437685
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 213901..215459
location: region:213901-215459:1
so has part: feature:213901-215459:1:exon
subclass of: SO_0000010

117437685
type: Gene
SIO_000068: ncbigene

position:213901:1
position: 213901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215459:1
position: 215459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213901-215459:1:exon

LOC117437685
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437685
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072255.1
SIO_010081: LOC117437685
subclass of: SO_0000673
so part of: LOC117437685
location: join(213901..213982,214068..214148,214837..214954,215324..215459)
location: region:213901-215459:1
so has part: feature:213901-213982:1:exon
so has part: feature:214068-214148:1:exon
so has part: feature:214837-214954:1:exon
so has part: feature:215324-215459:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:213901-213982:1:exon

position:213982:1
position: 213982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214068-214148:1:exon

position:214068:1
position: 214068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214148:1
position: 214148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214837-214954:1:exon

position:214837:1
position: 214837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214954:1
position: 214954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:215324-215459:1:exon

position:215324:1
position: 215324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437685
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR4
translation: MSGALTQGLERVPAQVGYLVISDGAVLASSGELQNDEVSAGLLSSLVSAAAGLRLQRGTEPPFKRLSVVFGDHSLLVTVSGQKLFVVKRQNHVQEPLTV
SIO_010081: LOC117437685
subclass of: SO_0000673
so part of: LOC117437685
location: join(213980..213982,214068..214148,214837..214954,215324..215421)
location: region:213980-215421:1
so has part: feature:213980-213982:1:exon
so has part: feature:214068-214148:1:exon
so has part: feature:214837-214954:1:exon
so has part: feature:215324-215421:1:exon

XP_033928146.1
type: Protein
SIO_000068: ncbiprotein

position:213980:1
position: 213980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215421:1
position: 215421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213980-213982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214068-214148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214837-214954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215324-215421:1:exon

LOC106023324
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC106023324
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(216591..227447)
location: region:216591-227447:-1
so has part: feature:216591-227447:-1:exon
subclass of: SO_0000010

106023324
type: Gene
SIO_000068: ncbigene

position:216591:-1
position: 216591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227447:-1
position: 227447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216591-227447:-1:exon

LOC106023324
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC106023324
product: microtubule associated protein 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072262.1
SIO_010081: LOC106023324
subclass of: SO_0000673
so part of: LOC106023324
location: complement(join(216591..216745,218957..219183,219869..219993,220867..221048,221714..221796,222457..222595,223149..223269,224133..224219,225023..225155,225585..225680,227054..227447))
location: region:216591-227447:-1
so has part: feature:227054-227447:-1:exon
so has part: feature:225585-225680:-1:exon
so has part: feature:225023-225155:-1:exon
so has part: feature:224133-224219:-1:exon
so has part: feature:223149-223269:-1:exon
so has part: feature:222457-222595:-1:exon
so has part: feature:221714-221796:-1:exon
so has part: feature:220867-221048:-1:exon
so has part: feature:219869-219993:-1:exon
so has part: feature:218957-219183:-1:exon
so has part: feature:216591-216745:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227054-227447:-1:exon

position:227054:-1
position: 227054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:225585-225680:-1:exon

position:225585:-1
position: 225585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225680:-1
position: 225680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225023-225155:-1:exon

position:225023:-1
position: 225023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225155:-1
position: 225155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:224133-224219:-1:exon

position:224133:-1
position: 224133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224219:-1
position: 224219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:223149-223269:-1:exon

position:223149:-1
position: 223149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223269:-1
position: 223269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:222457-222595:-1:exon

position:222457:-1
position: 222457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222595:-1
position: 222595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:221714-221796:-1:exon

position:221714:-1
position: 221714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221796:-1
position: 221796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:220867-221048:-1:exon

position:220867:-1
position: 220867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221048:-1
position: 221048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:219869-219993:-1:exon

position:219869:-1
position: 219869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219993:-1
position: 219993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:218957-219183:-1:exon

position:218957:-1
position: 218957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219183:-1
position: 219183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:216591-216745:-1:exon

position:216745:-1
position: 216745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106023324
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC106023324
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein 11
translation: MESQCDYSMYFPAVPFSARELLSAEPGRYRSLPRRNHLFLGETVRFLLVLRCRPGPGSPPWPAVVSSLTALASVSPGPGAGPAEGEGEESAPCGREDPAAYRECGVMLSEGGGARRRVPVEEPIVCPDEVIFPLTIALDRLPPGTSKAKVVVTVWRRDSEPPELQEGSGYLELLQSRDPAQVFRQEQAAFKAQVSTLLTVLPPPVVRCRQLTVSGKYLTLLKVLNGSSQDPLSLCSVRVLPNLNASYLPVLPDGSVLLVDDVCHHSGEVPVGSFCPIAGGSGPCSLQALEEQNFMFQLQAAPRGGEGREGLEVPLIAIIQWSTPKLPFTTSISTHYRLPSIRLERPRFVMMGTCVSPVVVGQRFRVTYTLVNELQDFLSVRLVWTPESGEGPMGAMGCQQGALDSIVCHSPHTNLGCSRKGSSSTVSVGFMALREGLFELSQHMKLKLQFAAPGVVPGVVPGVVPGVVPAVPKSVSRRSSPSSPALRDLLERHQGGLGRSQSFSHQQPPRGHLSRSGSGLERRAITPPVGSPVGRPLALGPERPVLALDKIAKRECKVLVVPPVQ
SIO_010081: LOC106023324
subclass of: SO_0000673
so part of: LOC106023324
location: complement(join(216592..216745,218957..219183,219869..219993,220867..221048,221714..221796,222457..222595,223149..223269,224133..224219,225023..225155,225585..225680,227054..227404))
location: region:216592-227404:-1
so has part: feature:227054-227404:-1:exon
so has part: feature:225585-225680:-1:exon
so has part: feature:225023-225155:-1:exon
so has part: feature:224133-224219:-1:exon
so has part: feature:223149-223269:-1:exon
so has part: feature:222457-222595:-1:exon
so has part: feature:221714-221796:-1:exon
so has part: feature:220867-221048:-1:exon
so has part: feature:219869-219993:-1:exon
so has part: feature:218957-219183:-1:exon
so has part: feature:216592-216745:-1:exon

XP_033928153.1
type: Protein
SIO_000068: ncbiprotein

position:216592:-1
position: 216592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227404:-1
position: 227404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227054-227404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225585-225680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225023-225155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:224133-224219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223149-223269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222457-222595:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221714-221796:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220867-221048:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:219869-219993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218957-219183:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216592-216745:-1:exon

LOC115945607
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 228285..237110
location: region:228285-237110:1
so has part: feature:228285-237110:1:exon
subclass of: SO_0000010

115945607
type: Gene
SIO_000068: ncbigene

position:228285:1
position: 228285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237110:1
position: 237110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228285-237110:1:exon

LOC115945607
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945607
product: COP9 signalosome subunit 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034072261.1
SIO_010081: LOC115945607
subclass of: SO_0000673
so part of: LOC115945607
location: join(228285..228781,230784..230909,232811..232942,233997..234085,234174..234236,234360..234407,235223..235337,235906..235998,236110..236210,236926..237110)
location: region:228285-237110:1
so has part: feature:228285-228781:1:exon
so has part: feature:230784-230909:1:exon
so has part: feature:232811-232942:1:exon
so has part: feature:233997-234085:1:exon
so has part: feature:234174-234236:1:exon
so has part: feature:234360-234407:1:exon
so has part: feature:235223-235337:1:exon
so has part: feature:235906-235998:1:exon
so has part: feature:236110-236210:1:exon
so has part: feature:236926-237110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228285-228781:1:exon

position:228781:1
position: 228781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:230784-230909:1:exon

position:230784:1
position: 230784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230909:1
position: 230909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:232811-232942:1:exon

position:232811:1
position: 232811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232942:1
position: 232942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:233997-234085:1:exon

position:233997:1
position: 233997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234085:1
position: 234085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:234174-234236:1:exon

position:234174:1
position: 234174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234236:1
position: 234236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:234360-234407:1:exon

position:234360:1
position: 234360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234407:1
position: 234407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:235223-235337:1:exon

position:235223:1
position: 235223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235337:1
position: 235337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:235906-235998:1:exon

position:235906:1
position: 235906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235998:1
position: 235998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:236110-236210:1:exon

position:236110:1
position: 236110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236210:1
position: 236210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:236926-237110:1:exon

position:236926:1
position: 236926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115945607
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 6
translation: MRRAQAKMAAAASGAASSTTGSNGAGGMEVDGAAAPPVMAGGVPGSVAVALHPLVILNISDHWIRLRSQEGRPGQVIGALIGRQEGRSIEVMNSFELLSHLVDGHVLIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPEPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELPYTLATEEAERIGVDHVARMTATGGGESSTVAEHLIAQHSAIKMLHSRVRLILEYVRAAQAGEVPFNHEILREACALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTLTKACNTMNQFVNKFNVLYDRQGLGRRMRGLFF
SIO_010081: LOC115945607
subclass of: SO_0000673
so part of: LOC115945607
location: join(228682..228781,230784..230909,232811..232942,233997..234085,234174..234236,234360..234407,235223..235337,235906..235998,236110..236210,236926..237066)
location: region:228682-237066:1
so has part: feature:228682-228781:1:exon
so has part: feature:230784-230909:1:exon
so has part: feature:232811-232942:1:exon
so has part: feature:233997-234085:1:exon
so has part: feature:234174-234236:1:exon
so has part: feature:234360-234407:1:exon
so has part: feature:235223-235337:1:exon
so has part: feature:235906-235998:1:exon
so has part: feature:236110-236210:1:exon
so has part: feature:236926-237066:1:exon

XP_033928152.1
type: Protein
SIO_000068: ncbiprotein

position:228682:1
position: 228682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237066:1
position: 237066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228682-228781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230784-230909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232811-232942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233997-234085:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234174-234236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234360-234407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235223-235337:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235906-235998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:236110-236210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236926-237066:1:exon

LOC117437689
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(239491..253511)
location: region:239491-253511:-1
so has part: feature:239491-253511:-1:exon
subclass of: SO_0000010

117437689
type: Gene
SIO_000068: ncbigene

position:239491:-1
position: 239491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253511:-1
position: 253511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239491-253511:-1:exon

LOC117437689
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437689
product: minichromosome maintenance complex component 7
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072260.1
SIO_010081: LOC117437689
subclass of: SO_0000673
so part of: LOC117437689
location: complement(join(239491..239736,240373..240482,241191..241359,242279..242362,243727..244120,244953..245036,245244..245375,246554..246668,247435..247584,249073..249210,249898..250079,250829..250947,251751..251909,252738..252817,253410..253511))
location: region:239491-253511:-1
so has part: feature:253410-253511:-1:exon
so has part: feature:252738-252817:-1:exon
so has part: feature:251751-251909:-1:exon
so has part: feature:250829-250947:-1:exon
so has part: feature:249898-250079:-1:exon
so has part: feature:249073-249210:-1:exon
so has part: feature:247435-247584:-1:exon
so has part: feature:246554-246668:-1:exon
so has part: feature:245244-245375:-1:exon
so has part: feature:244953-245036:-1:exon
so has part: feature:243727-244120:-1:exon
so has part: feature:242279-242362:-1:exon
so has part: feature:241191-241359:-1:exon
so has part: feature:240373-240482:-1:exon
so has part: feature:239491-239736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253410-253511:-1:exon

position:253410:-1
position: 253410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252738-252817:-1:exon

position:252738:-1
position: 252738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252817:-1
position: 252817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251751-251909:-1:exon

position:251751:-1
position: 251751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251909:-1
position: 251909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:250829-250947:-1:exon

position:250829:-1
position: 250829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250947:-1
position: 250947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249898-250079:-1:exon

position:249898:-1
position: 249898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250079:-1
position: 250079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:249073-249210:-1:exon

position:249073:-1
position: 249073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249210:-1
position: 249210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:247435-247584:-1:exon

position:247435:-1
position: 247435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247584:-1
position: 247584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:246554-246668:-1:exon

position:246554:-1
position: 246554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246668:-1
position: 246668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:245244-245375:-1:exon

position:245244:-1
position: 245244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245375:-1
position: 245375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:244953-245036:-1:exon

position:244953:-1
position: 244953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245036:-1
position: 245036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:243727-244120:-1:exon

position:243727:-1
position: 243727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244120:-1
position: 244120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:242279-242362:-1:exon

position:242279:-1
position: 242279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242362:-1
position: 242362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:241191-241359:-1:exon

position:241191:-1
position: 241191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241359:-1
position: 241359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:240373-240482:-1:exon

position:240373:-1
position: 240373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240482:-1
position: 240482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:239491-239736:-1:exon

position:239736:-1
position: 239736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437689
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437689
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DNA replication licensing factor MCM7
translation: MIPVDYAAEKEKIRRFLQEFYREGADGRKEFPYREQLAQLQSRSLPALWVALDDVAEADPGLAEAAADNVRRYQSLFMETLQEMLQPQTQEPPRDVLDVYLQHRLLLEQRGQGQPRDPQNQYPPQLLRRFELYFRPPSPSPPRSLRSVGASSIGKLVTVTGVVTRVTEVQPRLEVATYTCDQCGAETYQPISAPTFTPLLLCPSRVCRMDRAGGRLYLQSRGSKFIKYQELRMQEHMDHVPVGHLPRAITVAATGANTRQAQPGDHIRVTGVTLPLLRAGFQQLVQGLLSETYLEAHEVLKMDKSEEEELGGEDLSEEELQLLAQGNVYERLAGSIAPEIYGHEDVKKALLLLLVGGVERDLPGLRIRGNINICLMGDPGVAKSQLLSYIDRLAPRSHFTTGRGSSGAGLTASVTRDPTTGSVSVSGGALVLSDCGVCVMDEFEKLRGEERAALHEAMEQQRLSLAKAGVMATLNARCAVLAAANPAGGRWEQAAAIGNNVRMAPALRSRFDLLWAMRDRHQRHRDISLAHHITFVHRHNREPPGAFQPLDMKLMRRYLARCKRHQPQVPEALAEPITAAYVELRKGTGNGRELGFTSARSLLAILRMATALARLRLGDVVEREDVAEAVRLLEMSRESLEPEPEPSARPQRPSDAILGALRDLGGGRGAVPYSEALERCLAKGFTPAQLQGALQEWEELNVLQVNAARTRITFV
SIO_010081: LOC117437689
subclass of: SO_0000673
so part of: LOC117437689
location: complement(join(239535..239736,240373..240482,241191..241359,242279..242362,243727..244120,244953..245036,245244..245375,246554..246668,247435..247584,249073..249210,249898..250079,250829..250947,251751..251909,252738..252817,253410..253440))
location: region:239535-253440:-1
so has part: feature:253410-253440:-1:exon
so has part: feature:252738-252817:-1:exon
so has part: feature:251751-251909:-1:exon
so has part: feature:250829-250947:-1:exon
so has part: feature:249898-250079:-1:exon
so has part: feature:249073-249210:-1:exon
so has part: feature:247435-247584:-1:exon
so has part: feature:246554-246668:-1:exon
so has part: feature:245244-245375:-1:exon
so has part: feature:244953-245036:-1:exon
so has part: feature:243727-244120:-1:exon
so has part: feature:242279-242362:-1:exon
so has part: feature:241191-241359:-1:exon
so has part: feature:240373-240482:-1:exon
so has part: feature:239535-239736:-1:exon

XP_033928151.1
type: Protein
SIO_000068: ncbiprotein

position:239535:-1
position: 239535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253440:-1
position: 253440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253410-253440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252738-252817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251751-251909:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250829-250947:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249898-250079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249073-249210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247435-247584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246554-246668:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245244-245375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244953-245036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:243727-244120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:242279-242362:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:241191-241359:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240373-240482:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:239535-239736:-1:exon

LOC117437679
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 253597..264471
location: region:253597-264471:1
so has part: feature:253597-264471:1:exon
subclass of: SO_0000010

117437679
type: Gene
SIO_000068: ncbigene

position:253597:1
position: 253597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264471:1
position: 264471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253597-264471:1:exon

LOC117437679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437679
product: adaptor related protein complex 4 subunit mu 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072241.1
SIO_010081: LOC117437679
subclass of: SO_0000673
so part of: LOC117437679
location: join(253597..253689,254238..254299,255023..255117,256198..256304,257600..257696,258452..258562,259403..259483,260058..260114,260351..260417,261063..261116,261463..261569,261707..261798,262107..262151,262339..262389,263114..263231,264193..264471)
location: region:253597-264471:1
so has part: feature:253597-253689:1:exon
so has part: feature:254238-254299:1:exon
so has part: feature:255023-255117:1:exon
so has part: feature:256198-256304:1:exon
so has part: feature:257600-257696:1:exon
so has part: feature:258452-258562:1:exon
so has part: feature:259403-259483:1:exon
so has part: feature:260058-260114:1:exon
so has part: feature:260351-260417:1:exon
so has part: feature:261063-261116:1:exon
so has part: feature:261463-261569:1:exon
so has part: feature:261707-261798:1:exon
so has part: feature:262107-262151:1:exon
so has part: feature:262339-262389:1:exon
so has part: feature:263114-263231:1:exon
so has part: feature:264193-264471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253597-253689:1:exon

position:253689:1
position: 253689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254238-254299:1:exon

position:254238:1
position: 254238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254299:1
position: 254299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:255023-255117:1:exon

position:255023:1
position: 255023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255117:1
position: 255117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:256198-256304:1:exon

position:256198:1
position: 256198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256304:1
position: 256304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:257600-257696:1:exon

position:257600:1
position: 257600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257696:1
position: 257696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:258452-258562:1:exon

position:258452:1
position: 258452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258562:1
position: 258562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:259403-259483:1:exon

position:259403:1
position: 259403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259483:1
position: 259483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:260058-260114:1:exon

position:260058:1
position: 260058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260114:1
position: 260114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:260351-260417:1:exon

position:260351:1
position: 260351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260417:1
position: 260417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:261063-261116:1:exon

position:261063:1
position: 261063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261116:1
position: 261116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:261463-261569:1:exon

position:261463:1
position: 261463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261569:1
position: 261569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:261707-261798:1:exon

position:261707:1
position: 261707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261798:1
position: 261798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:262107-262151:1:exon

position:262107:1
position: 262107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262151:1
position: 262151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:262339-262389:1:exon

position:262339:1
position: 262339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262389:1
position: 262389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:263114-263231:1:exon

position:263114:1
position: 263114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263231:1
position: 263231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:264193-264471:1:exon

position:264193:1
position: 264193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437679
product: adaptor related protein complex 4 subunit mu 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034072244.1
SIO_010081: LOC117437679
subclass of: SO_0000673
so part of: LOC117437679
location: join(253597..253689,254238..254299,255023..255117,256198..256304,257600..257669,258452..258562,259403..259483,260058..260114,260351..260417,261063..261116,261463..261569,261707..261798,262107..262151,262339..262389,263114..263231,264193..264471)
location: region:253597-264471:1
so has part: feature:253597-253689:1:exon
so has part: feature:254238-254299:1:exon
so has part: feature:255023-255117:1:exon
so has part: feature:256198-256304:1:exon
so has part: feature:257600-257669:1:exon
so has part: feature:258452-258562:1:exon
so has part: feature:259403-259483:1:exon
so has part: feature:260058-260114:1:exon
so has part: feature:260351-260417:1:exon
so has part: feature:261063-261116:1:exon
so has part: feature:261463-261569:1:exon
so has part: feature:261707-261798:1:exon
so has part: feature:262107-262151:1:exon
so has part: feature:262339-262389:1:exon
so has part: feature:263114-263231:1:exon
so has part: feature:264193-264471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253597-253689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254238-254299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255023-255117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256198-256304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257600-257669:1:exon

position:257669:1
position: 257669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:258452-258562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259403-259483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260058-260114:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260351-260417:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261063-261116:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261463-261569:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:261707-261798:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262107-262151:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:262339-262389:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263114-263231:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264193-264471:1:exon

LOC117437679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437679
product: adaptor related protein complex 4 subunit mu 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072243.1
SIO_010081: LOC117437679
subclass of: SO_0000673
so part of: LOC117437679
location: join(253597..253689,254238..254299,255023..255117,256198..256304,257618..257696,258452..258562,259403..259483,260058..260114,260351..260417,261063..261116,261463..261569,261707..261798,262107..262151,262339..262389,263114..263231,264193..264471)
location: region:253597-264471:1
so has part: feature:253597-253689:1:exon
so has part: feature:254238-254299:1:exon
so has part: feature:255023-255117:1:exon
so has part: feature:256198-256304:1:exon
so has part: feature:257618-257696:1:exon
so has part: feature:258452-258562:1:exon
so has part: feature:259403-259483:1:exon
so has part: feature:260058-260114:1:exon
so has part: feature:260351-260417:1:exon
so has part: feature:261063-261116:1:exon
so has part: feature:261463-261569:1:exon
so has part: feature:261707-261798:1:exon
so has part: feature:262107-262151:1:exon
so has part: feature:262339-262389:1:exon
so has part: feature:263114-263231:1:exon
so has part: feature:264193-264471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:253597-253689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254238-254299:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255023-255117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256198-256304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257618-257696:1:exon

position:257618:1
position: 257618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:258452-258562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:259403-259483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260058-260114:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260351-260417:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261063-261116:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261463-261569:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:261707-261798:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262107-262151:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:262339-262389:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263114-263231:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264193-264471:1:exon

LOC117437679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437679
product: adaptor related protein complex 4 subunit mu 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072242.1
SIO_010081: LOC117437679
subclass of: SO_0000673
so part of: LOC117437679
location: join(254198..254299,255023..255117,256198..256304,257600..257696,258452..258562,259403..259483,260058..260114,260351..260417,261063..261116,261463..261569,261707..261798,262107..262151,262339..262389,263114..263231,264193..264471)
location: region:254198-264471:1
so has part: feature:254198-254299:1:exon
so has part: feature:255023-255117:1:exon
so has part: feature:256198-256304:1:exon
so has part: feature:257600-257696:1:exon
so has part: feature:258452-258562:1:exon
so has part: feature:259403-259483:1:exon
so has part: feature:260058-260114:1:exon
so has part: feature:260351-260417:1:exon
so has part: feature:261063-261116:1:exon
so has part: feature:261463-261569:1:exon
so has part: feature:261707-261798:1:exon
so has part: feature:262107-262151:1:exon
so has part: feature:262339-262389:1:exon
so has part: feature:263114-263231:1:exon
so has part: feature:264193-264471:1:exon

position:254198:1
position: 254198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254198-254299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255023-255117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256198-256304:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257600-257696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258452-258562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259403-259483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260058-260114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260351-260417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261063-261116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261463-261569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261707-261798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262107-262151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262339-262389:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263114-263231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264193-264471:1:exon

LOC117437679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X1
translation: MLSQLFILSSKGDRLLHRDFRGDPSDPITDVADVFYRGVTALPGDQAPVFMALGGLHFVHVRHSGLYFVATTTAEASPFTLVEFLNRFVSLLRDFCGLLSEKNLGENFALVSELLEEMLDYGYIQSTAPEVLRSLTQSPPVSPSPFSLLDLGSIGLFGADTQRSKVAPGSAATRPLGTPRGEQGEELFVDVLERLTVVLAPNGTPLKVDVQGEMRLKCYIPNCRELRLGLSEEFCVGKAELRGYGTQVRVDEVSFHPCVNLEEFEAQRVLRVTPPQGEVTLMRYQLLDDVPTPLPFRLYPHMEWDPMGRLRLHLKLRCDLPPNNHAINIRLELPLPKGVTSVAQELSSPDQRAEVPPGSQCIQWDIPKCRGGAQVGAIFKLRSPAPPPALPPAAARFELPAVTCSGLRLRFLRLAGGGGAGQAPPPRWLRYVTHSDSYVMRMEAPPPPPLPAQTSRGSQ
SIO_010081: LOC117437679
subclass of: SO_0000673
so part of: LOC117437679
location: join(254242..254299,255023..255117,256198..256304,257600..257696,258452..258562,259403..259483,260058..260114,260351..260417,261063..261116,261463..261569,261707..261798,262107..262151,262339..262389,263114..263231,264193..264432)
location: region:254242-264432:1
so has part: feature:254242-254299:1:exon
so has part: feature:255023-255117:1:exon
so has part: feature:256198-256304:1:exon
so has part: feature:257600-257696:1:exon
so has part: feature:258452-258562:1:exon
so has part: feature:259403-259483:1:exon
so has part: feature:260058-260114:1:exon
so has part: feature:260351-260417:1:exon
so has part: feature:261063-261116:1:exon
so has part: feature:261463-261569:1:exon
so has part: feature:261707-261798:1:exon
so has part: feature:262107-262151:1:exon
so has part: feature:262339-262389:1:exon
so has part: feature:263114-263231:1:exon
so has part: feature:264193-264432:1:exon

XP_033928132.1
type: Protein
SIO_000068: ncbiprotein

position:254242:1
position: 254242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264432:1
position: 264432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254242-254299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255023-255117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256198-256304:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257600-257696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258452-258562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259403-259483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260058-260114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260351-260417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261063-261116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261463-261569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261707-261798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262107-262151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262339-262389:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263114-263231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264193-264432:1:exon

LOC117437679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X1
translation: MLSQLFILSSKGDRLLHRDFRGDPSDPITDVADVFYRGVTALPGDQAPVFMALGGLHFVHVRHSGLYFVATTTAEASPFTLVEFLNRFVSLLRDFCGLLSEKNLGENFALVSELLEEMLDYGYIQSTAPEVLRSLTQSPPVSPSPFSLLDLGSIGLFGADTQRSKVAPGSAATRPLGTPRGEQGEELFVDVLERLTVVLAPNGTPLKVDVQGEMRLKCYIPNCRELRLGLSEEFCVGKAELRGYGTQVRVDEVSFHPCVNLEEFEAQRVLRVTPPQGEVTLMRYQLLDDVPTPLPFRLYPHMEWDPMGRLRLHLKLRCDLPPNNHAINIRLELPLPKGVTSVAQELSSPDQRAEVPPGSQCIQWDIPKCRGGAQVGAIFKLRSPAPPPALPPAAARFELPAVTCSGLRLRFLRLAGGGGAGQAPPPRWLRYVTHSDSYVMRMEAPPPPPLPAQTSRGSQ
SIO_010081: LOC117437679
subclass of: SO_0000673
so part of: LOC117437679
location: join(254242..254299,255023..255117,256198..256304,257600..257696,258452..258562,259403..259483,260058..260114,260351..260417,261063..261116,261463..261569,261707..261798,262107..262151,262339..262389,263114..263231,264193..264432)
location: region:254242-264432:1
so has part: feature:254242-254299:1:exon
so has part: feature:255023-255117:1:exon
so has part: feature:256198-256304:1:exon
so has part: feature:257600-257696:1:exon
so has part: feature:258452-258562:1:exon
so has part: feature:259403-259483:1:exon
so has part: feature:260058-260114:1:exon
so has part: feature:260351-260417:1:exon
so has part: feature:261063-261116:1:exon
so has part: feature:261463-261569:1:exon
so has part: feature:261707-261798:1:exon
so has part: feature:262107-262151:1:exon
so has part: feature:262339-262389:1:exon
so has part: feature:263114-263231:1:exon
so has part: feature:264193-264432:1:exon

XP_033928133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254242-254299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255023-255117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256198-256304:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257600-257696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258452-258562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259403-259483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260058-260114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260351-260417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261063-261116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261463-261569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261707-261798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262107-262151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262339-262389:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263114-263231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264193-264432:1:exon

LOC117437679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X3
translation: MLSQLFILSSKGDRLLHRDFRGDPSDPITDVADVFYRGVTALPGDQAPVFMALGGLHFVHVRHSGLYFVATTTAEASPFTLVEFLNRFVSLLRDFCGLLSEKNLGENFALDYGYIQSTAPEVLRSLTQSPPVSPSPFSLLDLGSIGLFGADTQRSKVAPGSAATRPLGTPRGEQGEELFVDVLERLTVVLAPNGTPLKVDVQGEMRLKCYIPNCRELRLGLSEEFCVGKAELRGYGTQVRVDEVSFHPCVNLEEFEAQRVLRVTPPQGEVTLMRYQLLDDVPTPLPFRLYPHMEWDPMGRLRLHLKLRCDLPPNNHAINIRLELPLPKGVTSVAQELSSPDQRAEVPPGSQCIQWDIPKCRGGAQVGAIFKLRSPAPPPALPPAAARFELPAVTCSGLRLRFLRLAGGGGAGQAPPPRWLRYVTHSDSYVMRMEAPPPPPLPAQTSRGSQ
SIO_010081: LOC117437679
subclass of: SO_0000673
so part of: LOC117437679
location: join(254242..254299,255023..255117,256198..256304,257600..257669,258452..258562,259403..259483,260058..260114,260351..260417,261063..261116,261463..261569,261707..261798,262107..262151,262339..262389,263114..263231,264193..264432)
location: region:254242-264432:1
so has part: feature:254242-254299:1:exon
so has part: feature:255023-255117:1:exon
so has part: feature:256198-256304:1:exon
so has part: feature:257600-257669:1:exon
so has part: feature:258452-258562:1:exon
so has part: feature:259403-259483:1:exon
so has part: feature:260058-260114:1:exon
so has part: feature:260351-260417:1:exon
so has part: feature:261063-261116:1:exon
so has part: feature:261463-261569:1:exon
so has part: feature:261707-261798:1:exon
so has part: feature:262107-262151:1:exon
so has part: feature:262339-262389:1:exon
so has part: feature:263114-263231:1:exon
so has part: feature:264193-264432:1:exon

XP_033928135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254242-254299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255023-255117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256198-256304:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257600-257669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258452-258562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259403-259483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260058-260114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260351-260417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261063-261116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261463-261569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261707-261798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262107-262151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262339-262389:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263114-263231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264193-264432:1:exon

LOC117437679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X2
translation: MLSQLFILSSKGDRLLHRDFRGDPSDPITDVADVFYRGVTALPGDQAPVFMALGGLHFVHVRHSGLYFVATTTAEASPFTLVEFLNRDFCGLLSEKNLGENFALVSELLEEMLDYGYIQSTAPEVLRSLTQSPPVSPSPFSLLDLGSIGLFGADTQRSKVAPGSAATRPLGTPRGEQGEELFVDVLERLTVVLAPNGTPLKVDVQGEMRLKCYIPNCRELRLGLSEEFCVGKAELRGYGTQVRVDEVSFHPCVNLEEFEAQRVLRVTPPQGEVTLMRYQLLDDVPTPLPFRLYPHMEWDPMGRLRLHLKLRCDLPPNNHAINIRLELPLPKGVTSVAQELSSPDQRAEVPPGSQCIQWDIPKCRGGAQVGAIFKLRSPAPPPALPPAAARFELPAVTCSGLRLRFLRLAGGGGAGQAPPPRWLRYVTHSDSYVMRMEAPPPPPLPAQTSRGSQ
SIO_010081: LOC117437679
subclass of: SO_0000673
so part of: LOC117437679
location: join(254242..254299,255023..255117,256198..256304,257618..257696,258452..258562,259403..259483,260058..260114,260351..260417,261063..261116,261463..261569,261707..261798,262107..262151,262339..262389,263114..263231,264193..264432)
location: region:254242-264432:1
so has part: feature:254242-254299:1:exon
so has part: feature:255023-255117:1:exon
so has part: feature:256198-256304:1:exon
so has part: feature:257618-257696:1:exon
so has part: feature:258452-258562:1:exon
so has part: feature:259403-259483:1:exon
so has part: feature:260058-260114:1:exon
so has part: feature:260351-260417:1:exon
so has part: feature:261063-261116:1:exon
so has part: feature:261463-261569:1:exon
so has part: feature:261707-261798:1:exon
so has part: feature:262107-262151:1:exon
so has part: feature:262339-262389:1:exon
so has part: feature:263114-263231:1:exon
so has part: feature:264193-264432:1:exon

XP_033928134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254242-254299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255023-255117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:256198-256304:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257618-257696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258452-258562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259403-259483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260058-260114:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260351-260417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261063-261116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261463-261569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261707-261798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262107-262151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262339-262389:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263114-263231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264193-264432:1:exon

LOC117437665
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(264999..267765)
location: region:264999-267765:-1
so has part: feature:264999-267765:-1:exon
subclass of: SO_0000010

117437665
type: Gene
SIO_000068: ncbigene

position:264999:-1
position: 264999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267765:-1
position: 267765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264999-267765:-1:exon

LOC117437665
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437665
product: adenosine deaminase tRNA specific 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072220.1
SIO_010081: LOC117437665
subclass of: SO_0000673
so part of: LOC117437665
location: complement(join(264999..265267,265454..266152,267720..267765))
location: region:264999-267765:-1
so has part: feature:267720-267765:-1:exon
so has part: feature:265454-266152:-1:exon
so has part: feature:264999-265267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267720-267765:-1:exon

position:267720:-1
position: 267720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265454-266152:-1:exon

position:265454:-1
position: 265454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266152:-1
position: 266152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:264999-265267:-1:exon

position:265267:-1
position: 265267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive tRNA-specific adenosine deaminase-like protein 3
translation: MRLHTGPYWHKLVQTGDGAADDVTAATTPDPSGDVTKAPSAITKGTDDVTNDVTEGPSMATKDTDDVTDAARDNPVNDVTADVTRANPVNDVTRDNPINDVTADVTASPLPPLRVLLGPSVSPLGLGSPFRVLVPGRAPHPGPETEAALAMGLWPWVLRGGSPPADPPPLQPMEAAAVAGAMAAAVAAALSGVRSGMEPSGAAVMDPGTGEVVAAAGDGRRGGHPLSHATMRCLEEVARRRRGYGGYGGINRDNGDTMGYLCQGWDVVLTREPCALCAMALVLARARRVLFGAPAPQGALSTRYGLHGRSRLNHRYRAYGGVAPKVWAPLVGDGVEK
SIO_010081: LOC117437665
subclass of: SO_0000673
so part of: LOC117437665
location: complement(join(264999..265267,265454..266152,267720..267765))
location: region:264999-267765:-1
so has part: feature:267720-267765:-1:exon
so has part: feature:265454-266152:-1:exon
so has part: feature:264999-265267:-1:exon

XP_033928111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267720-267765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:265454-266152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264999-265267:-1:exon

LOC117437676
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(268703..291866)
location: region:268703-291866:-1
so has part: feature:268703-291866:-1:exon
subclass of: SO_0000010

117437676
type: Gene
SIO_000068: ncbigene

position:268703:-1
position: 268703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291866:-1
position: 291866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268703-291866:-1:exon

LOC117437676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437676
product: discs large MAGUK scaffold protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072238.1
SIO_010081: LOC117437676
subclass of: SO_0000673
so part of: LOC117437676
location: complement(join(268703..268928,269932..270023,270650..270759,272187..272359,273975..274076,274644..274682,274797..274824,274930..274966,275776..275952,276933..277047,279294..279396,281898..282054,283085..283223,284374..284518,285640..285776,287786..287955,289063..289187,289770..289820,289917..289970,290637..290702,291852..291866))
location: region:268703-291866:-1
so has part: feature:291852-291866:-1:exon
so has part: feature:290637-290702:-1:exon
so has part: feature:289917-289970:-1:exon
so has part: feature:289770-289820:-1:exon
so has part: feature:289063-289187:-1:exon
so has part: feature:287786-287955:-1:exon
so has part: feature:285640-285776:-1:exon
so has part: feature:284374-284518:-1:exon
so has part: feature:283085-283223:-1:exon
so has part: feature:281898-282054:-1:exon
so has part: feature:279294-279396:-1:exon
so has part: feature:276933-277047:-1:exon
so has part: feature:275776-275952:-1:exon
so has part: feature:274930-274966:-1:exon
so has part: feature:274797-274824:-1:exon
so has part: feature:274644-274682:-1:exon
so has part: feature:273975-274076:-1:exon
so has part: feature:272187-272359:-1:exon
so has part: feature:270650-270759:-1:exon
so has part: feature:269932-270023:-1:exon
so has part: feature:268703-268928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291852-291866:-1:exon

position:291852:-1
position: 291852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:290637-290702:-1:exon

position:290637:-1
position: 290637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290702:-1
position: 290702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:289917-289970:-1:exon

position:289917:-1
position: 289917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289970:-1
position: 289970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289770-289820:-1:exon

position:289770:-1
position: 289770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289820:-1
position: 289820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:289063-289187:-1:exon

position:289063:-1
position: 289063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289187:-1
position: 289187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:287786-287955:-1:exon

position:287786:-1
position: 287786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287955:-1
position: 287955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:285640-285776:-1:exon

position:285640:-1
position: 285640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285776:-1
position: 285776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:284374-284518:-1:exon

position:284374:-1
position: 284374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284518:-1
position: 284518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:283085-283223:-1:exon

position:283085:-1
position: 283085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283223:-1
position: 283223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:281898-282054:-1:exon

position:281898:-1
position: 281898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282054:-1
position: 282054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:279294-279396:-1:exon

position:279294:-1
position: 279294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279396:-1
position: 279396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:276933-277047:-1:exon

position:276933:-1
position: 276933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277047:-1
position: 277047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:275776-275952:-1:exon

position:275776:-1
position: 275776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275952:-1
position: 275952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:274930-274966:-1:exon

position:274930:-1
position: 274930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274966:-1
position: 274966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:274797-274824:-1:exon

position:274797:-1
position: 274797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274824:-1
position: 274824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:274644-274682:-1:exon

position:274644:-1
position: 274644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274682:-1
position: 274682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:273975-274076:-1:exon

position:273975:-1
position: 273975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274076:-1
position: 274076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:272187-272359:-1:exon

position:272187:-1
position: 272187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272359:-1
position: 272359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:270650-270759:-1:exon

position:270650:-1
position: 270650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270759:-1
position: 270759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:269932-270023:-1:exon

position:269932:-1
position: 269932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270023:-1
position: 270023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:268703-268928:-1:exon

position:268928:-1
position: 268928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437676
product: discs large MAGUK scaffold protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072239.1
SIO_010081: LOC117437676
subclass of: SO_0000673
so part of: LOC117437676
location: complement(join(268703..268928,269932..270023,270650..270759,272187..272359,273975..274076,274644..274682,274797..274824,274930..274966,275776..275952,276933..277047,279294..279396,281898..282054,283085..283223,284219..284240))
location: region:268703-284240:-1
so has part: feature:284219-284240:-1:exon
so has part: feature:283085-283223:-1:exon
so has part: feature:281898-282054:-1:exon
so has part: feature:279294-279396:-1:exon
so has part: feature:276933-277047:-1:exon
so has part: feature:275776-275952:-1:exon
so has part: feature:274930-274966:-1:exon
so has part: feature:274797-274824:-1:exon
so has part: feature:274644-274682:-1:exon
so has part: feature:273975-274076:-1:exon
so has part: feature:272187-272359:-1:exon
so has part: feature:270650-270759:-1:exon
so has part: feature:269932-270023:-1:exon
so has part: feature:268703-268928:-1:exon

position:284240:-1
position: 284240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284219-284240:-1:exon

position:284219:-1
position: 284219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283085-283223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:281898-282054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279294-279396:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276933-277047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:275776-275952:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:274930-274966:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274797-274824:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274644-274682:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273975-274076:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272187-272359:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:270650-270759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:269932-270023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:268703-268928:-1:exon

LOC117437676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X1
translation: MEYEEITLERGNSGLGFSIAGGTDNPHVGDDPSIFITKIIPGGAAAQDGRLRVNDNILFVNEADVREVPHSAAVEALKEAGAVVRLYVMRRKAPQEKVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQIGDKILAVNNVSLEDVMHEDAVAALKNTFDVVYLRVAKPAGAFLGDGFVPPDVTGSYSAHLDADLGPQSYLGPEFPPSMTPTSPRRYSPGPKDLLPDDDVPRDPRRILIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRSATHEQAAVALKNAGQSVTIIAQYKPEEYSRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDCGFLSQALSFRFGDVLHVLDASDEEWWQARAVHPPGQPPQLGFVPSKRRVERREWTRLKAKDRVPGSGSQDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVGSRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVRQVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLENVLEISKRVTEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEELSGPYIWVPARDRL
SIO_010081: LOC117437676
subclass of: SO_0000673
so part of: LOC117437676
location: complement(join(268822..268928,269932..270023,270650..270759,272187..272359,273975..274076,274644..274682,274797..274824,274930..274966,275776..275952,276933..277047,279294..279396,281898..282054,283085..283223,284374..284518,285640..285776,287786..287955,289063..289187,289770..289799))
location: region:268822-289799:-1
so has part: feature:289770-289799:-1:exon
so has part: feature:289063-289187:-1:exon
so has part: feature:287786-287955:-1:exon
so has part: feature:285640-285776:-1:exon
so has part: feature:284374-284518:-1:exon
so has part: feature:283085-283223:-1:exon
so has part: feature:281898-282054:-1:exon
so has part: feature:279294-279396:-1:exon
so has part: feature:276933-277047:-1:exon
so has part: feature:275776-275952:-1:exon
so has part: feature:274930-274966:-1:exon
so has part: feature:274797-274824:-1:exon
so has part: feature:274644-274682:-1:exon
so has part: feature:273975-274076:-1:exon
so has part: feature:272187-272359:-1:exon
so has part: feature:270650-270759:-1:exon
so has part: feature:269932-270023:-1:exon
so has part: feature:268822-268928:-1:exon

XP_033928129.1
type: Protein
SIO_000068: ncbiprotein

position:268822:-1
position: 268822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289799:-1
position: 289799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289770-289799:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:289063-289187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287786-287955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285640-285776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284374-284518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283085-283223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281898-282054:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279294-279396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276933-277047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275776-275952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274930-274966:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:274797-274824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:274644-274682:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273975-274076:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272187-272359:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:270650-270759:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:269932-270023:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268822-268928:-1:exon

LOC117437676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X2
translation: MTPTSPRRYSPGPKDLLPDDDVPRDPRRILIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRSATHEQAAVALKNAGQSVTIIAQYKPEEYSRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDCGFLSQALSFRFGDVLHVLDASDEEWWQARAVHPPGQPPQLGFVPSKRRVERREWTRLKAKDRVPGSGSQDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVGSRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVRQVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLENVLEISKRVTEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEELSGPYIWVPARDRL
SIO_010081: LOC117437676
subclass of: SO_0000673
so part of: LOC117437676
location: complement(join(268822..268928,269932..270023,270650..270759,272187..272359,273975..274076,274644..274682,274797..274824,274930..274966,275776..275952,276933..277047,279294..279396,281898..282054,283085..283155))
location: region:268822-283155:-1
so has part: feature:283085-283155:-1:exon
so has part: feature:281898-282054:-1:exon
so has part: feature:279294-279396:-1:exon
so has part: feature:276933-277047:-1:exon
so has part: feature:275776-275952:-1:exon
so has part: feature:274930-274966:-1:exon
so has part: feature:274797-274824:-1:exon
so has part: feature:274644-274682:-1:exon
so has part: feature:273975-274076:-1:exon
so has part: feature:272187-272359:-1:exon
so has part: feature:270650-270759:-1:exon
so has part: feature:269932-270023:-1:exon
so has part: feature:268822-268928:-1:exon

XP_033928130.1
type: Protein
SIO_000068: ncbiprotein

position:283155:-1
position: 283155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283085-283155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281898-282054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279294-279396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276933-277047:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275776-275952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274930-274966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:274797-274824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274644-274682:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273975-274076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:272187-272359:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:270650-270759:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:269932-270023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:268822-268928:-1:exon

LOC117437686
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(298337..309513)
location: region:298337-309513:-1
so has part: feature:298337-309513:-1:exon
subclass of: SO_0000010

117437686
type: Gene
SIO_000068: ncbigene

position:298337:-1
position: 298337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309513:-1
position: 309513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298337-309513:-1:exon

LOC117437686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437686
product: acyl-CoA dehydrogenase very long chain
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072256.1
SIO_010081: LOC117437686
subclass of: SO_0000673
so part of: LOC117437686
location: complement(join(298337..298478,298562..298637,299632..299704,299981..300053,300641..300713,300817..300914,301624..301725,301857..301919,302022..302108,302196..302300,303375..303573,304918..305043,306025..306154,306229..306373,307738..307872,308424..308488,308601..308673,308761..308823,309244..309283,309396..309513))
location: region:298337-309513:-1
so has part: feature:309396-309513:-1:exon
so has part: feature:309244-309283:-1:exon
so has part: feature:308761-308823:-1:exon
so has part: feature:308601-308673:-1:exon
so has part: feature:308424-308488:-1:exon
so has part: feature:307738-307872:-1:exon
so has part: feature:306229-306373:-1:exon
so has part: feature:306025-306154:-1:exon
so has part: feature:304918-305043:-1:exon
so has part: feature:303375-303573:-1:exon
so has part: feature:302196-302300:-1:exon
so has part: feature:302022-302108:-1:exon
so has part: feature:301857-301919:-1:exon
so has part: feature:301624-301725:-1:exon
so has part: feature:300817-300914:-1:exon
so has part: feature:300641-300713:-1:exon
so has part: feature:299981-300053:-1:exon
so has part: feature:299632-299704:-1:exon
so has part: feature:298562-298637:-1:exon
so has part: feature:298337-298478:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309396-309513:-1:exon

position:309396:-1
position: 309396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309244-309283:-1:exon

position:309244:-1
position: 309244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309283:-1
position: 309283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308761-308823:-1:exon

position:308761:-1
position: 308761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308823:-1
position: 308823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:308601-308673:-1:exon

position:308601:-1
position: 308601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308673:-1
position: 308673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:308424-308488:-1:exon

position:308424:-1
position: 308424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308488:-1
position: 308488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:307738-307872:-1:exon

position:307738:-1
position: 307738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307872:-1
position: 307872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:306229-306373:-1:exon

position:306229:-1
position: 306229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306373:-1
position: 306373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:306025-306154:-1:exon

position:306025:-1
position: 306025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306154:-1
position: 306154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:304918-305043:-1:exon

position:304918:-1
position: 304918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305043:-1
position: 305043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:303375-303573:-1:exon

position:303375:-1
position: 303375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303573:-1
position: 303573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:302196-302300:-1:exon

position:302196:-1
position: 302196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302300:-1
position: 302300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:302022-302108:-1:exon

position:302022:-1
position: 302022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302108:-1
position: 302108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:301857-301919:-1:exon

position:301857:-1
position: 301857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301919:-1
position: 301919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:301624-301725:-1:exon

position:301624:-1
position: 301624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301725:-1
position: 301725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:300817-300914:-1:exon

position:300817:-1
position: 300817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300914:-1
position: 300914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:300641-300713:-1:exon

position:300641:-1
position: 300641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300713:-1
position: 300713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:299981-300053:-1:exon

position:299981:-1
position: 299981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300053:-1
position: 300053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:299632-299704:-1:exon

position:299632:-1
position: 299632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299704:-1
position: 299704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:298562-298637:-1:exon

position:298562:-1
position: 298562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298637:-1
position: 298637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:298337-298478:-1:exon

position:298478:-1
position: 298478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437686
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: very long-chain specific acyl-CoA dehydrogenase, mitochondrial
translation: MRGAAGMGLGLRLLRRAPTGYRGTRLQSTQQAEAVLDKAKVSSTAPPKAAATQEESKSFAVGMFLGRLNTEQVFPYPQALSEEQEQTLQDLVGPMSKFFEEVNDPFKNDALERVEEATMQGLKELGAFGLQVPPELGGLGLSNTQYARLVQIVGQHDLGVGITLGAHQSIGFKGLLLYGTPAQRSKYLPRLASGETVAAFCLTEPGSGSDAASIRTRAELSPCGSFYTLDGTKIWISNGGLAELFTVFAQTRLPDAATGESRDRITAFIVERSFGGVTHGAPEHKMGIRASNTAEVHFEGVRVPVGNVLGAPGGGFKVAMNVLNNGRFGMAAAMAGTMRGVIAKAVEHASNRTQFGAKIHTFGAIQEKLARMALLQYVTESMAYMISANMDQGATDFQIEAAISKIFGSEAAWTVTDECIQVMGGMGFMKEAGVERVLRDLRIFRIFEGTNDILRLFVALNGFQSLGVQLRGVQKALKNPLGNIGLLAGEVTQRIRRKAGMGSGLSLQEHVHPELKESAQKTLQCLELFAATADALLLKYGKKIVDEQFVLKRVADCAIDIYAMVVVLSRASRSLSMGLPTAQHERLLCDTWCQEAHHRVTVSLRPLPSESFRNLRSISQAVVEGGGVVTPTPLGF
SIO_010081: LOC117437686
subclass of: SO_0000673
so part of: LOC117437686
location: complement(join(298352..298478,298562..298637,299632..299704,299981..300053,300641..300713,300817..300914,301624..301725,301857..301919,302022..302108,302196..302300,303375..303573,304918..305043,306025..306154,306229..306373,307738..307872,308424..308488,308601..308673,308761..308823,309244..309283,309396..309454))
location: region:298352-309454:-1
so has part: feature:309396-309454:-1:exon
so has part: feature:309244-309283:-1:exon
so has part: feature:308761-308823:-1:exon
so has part: feature:308601-308673:-1:exon
so has part: feature:308424-308488:-1:exon
so has part: feature:307738-307872:-1:exon
so has part: feature:306229-306373:-1:exon
so has part: feature:306025-306154:-1:exon
so has part: feature:304918-305043:-1:exon
so has part: feature:303375-303573:-1:exon
so has part: feature:302196-302300:-1:exon
so has part: feature:302022-302108:-1:exon
so has part: feature:301857-301919:-1:exon
so has part: feature:301624-301725:-1:exon
so has part: feature:300817-300914:-1:exon
so has part: feature:300641-300713:-1:exon
so has part: feature:299981-300053:-1:exon
so has part: feature:299632-299704:-1:exon
so has part: feature:298562-298637:-1:exon
so has part: feature:298352-298478:-1:exon

XP_033928147.1
type: Protein
SIO_000068: ncbiprotein

position:298352:-1
position: 298352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309454:-1
position: 309454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309396-309454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309244-309283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308761-308823:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308601-308673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308424-308488:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307738-307872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306229-306373:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306025-306154:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304918-305043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:303375-303573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:302196-302300:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:302022-302108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:301857-301919:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:301624-301725:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:300817-300914:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:300641-300713:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:299981-300053:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:299632-299704:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:298562-298637:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:298352-298478:-1:exon

LOC117437687
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(311105..315738)
location: region:311105-315738:-1
so has part: feature:311105-315738:-1:exon
subclass of: SO_0000010

117437687
type: Gene
SIO_000068: ncbigene

position:311105:-1
position: 311105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315738:-1
position: 315738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311105-315738:-1:exon

LOC117437687
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437687
product: PHD finger protein 23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072257.1
SIO_010081: LOC117437687
subclass of: SO_0000673
so part of: LOC117437687
location: complement(join(311105..311385,313136..313826,315008..315100,315399..315430,315635..315738))
location: region:311105-315738:-1
so has part: feature:315635-315738:-1:exon
so has part: feature:315399-315430:-1:exon
so has part: feature:315008-315100:-1:exon
so has part: feature:313136-313826:-1:exon
so has part: feature:311105-311385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315635-315738:-1:exon

position:315635:-1
position: 315635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315399-315430:-1:exon

position:315399:-1
position: 315399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315430:-1
position: 315430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315008-315100:-1:exon

position:315008:-1
position: 315008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315100:-1
position: 315100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:313136-313826:-1:exon

position:313136:-1
position: 313136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313826:-1
position: 313826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:311105-311385:-1:exon

position:311385:-1
position: 311385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437687
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 23
translation: MAQPGPEEPLPSLKAETQPPEKRRRTIEDFNKFCSFVLAYAGYIPAAAEDPSWASSGPSSPHPDAGGTTGAAGGGDAWSSAPTALRTIETFVRKAKSSKKRGFNRLNAPDAALLDKMRLKDSLFDLGPPPQPSAIRVVPPPPPPPPPSLTASPRRRERPKRRGGGGGRPEARPRIKKSKKRRWKKAGGGEREGGGKASPSDTDSDEEPGTPPGARAPTALPPPAAPQVGASEGAGTDGGGGGKDGGGGGGGSTETSRDGDGSSSEGEMRVMDEDIMVESGDDSWDLITCYCQKPFAGRPMIECSQCGTWIHLSCARVKKNNVPDVFYCQKCREGPPRRAPPAPPRPSGDS
SIO_010081: LOC117437687
subclass of: SO_0000673
so part of: LOC117437687
location: complement(join(311171..311385,313136..313826,315008..315100,315399..315430,315635..315656))
location: region:311171-315656:-1
so has part: feature:315635-315656:-1:exon
so has part: feature:315399-315430:-1:exon
so has part: feature:315008-315100:-1:exon
so has part: feature:313136-313826:-1:exon
so has part: feature:311171-311385:-1:exon

XP_033928148.1
type: Protein
SIO_000068: ncbiprotein

position:311171:-1
position: 311171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315656:-1
position: 315656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315635-315656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315399-315430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315008-315100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:313136-313826:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311171-311385:-1:exon

LOC117437674
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(315935..318120)
location: region:315935-318120:-1
so has part: feature:315935-318120:-1:exon
subclass of: SO_0000010

117437674
type: Gene
SIO_000068: ncbigene

position:315935:-1
position: 315935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318120:-1
position: 318120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315935-318120:-1:exon

LOC117437674
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437674
product: GABA type A receptor-associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072235.1
SIO_010081: LOC117437674
subclass of: SO_0000673
so part of: LOC117437674
location: complement(join(315935..316034,316720..316838,316920..316998,317931..318120))
location: region:315935-318120:-1
so has part: feature:317931-318120:-1:exon
so has part: feature:316920-316998:-1:exon
so has part: feature:316720-316838:-1:exon
so has part: feature:315935-316034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317931-318120:-1:exon

position:317931:-1
position: 317931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316920-316998:-1:exon

position:316920:-1
position: 316920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316998:-1
position: 316998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316720-316838:-1:exon

position:316720:-1
position: 316720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316838:-1
position: 316838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:315935-316034:-1:exon

position:316034:-1
position: 316034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437674
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor-associated protein
translation: MKFLYKEEHPFEKRRCEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGA
SIO_010081: LOC117437674
subclass of: SO_0000673
so part of: LOC117437674
location: complement(join(315969..316034,316720..316838,316920..316998,317931..318020))
location: region:315969-318020:-1
so has part: feature:317931-318020:-1:exon
so has part: feature:316920-316998:-1:exon
so has part: feature:316720-316838:-1:exon
so has part: feature:315969-316034:-1:exon

XP_033928126.1
type: Protein
SIO_000068: ncbiprotein

position:315969:-1
position: 315969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318020:-1
position: 318020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317931-318020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316920-316998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316720-316838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315969-316034:-1:exon

LOC117437681
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(318421..323366)
location: region:318421-323366:-1
so has part: feature:318421-323366:-1:exon
subclass of: SO_0000010

117437681
type: Gene
SIO_000068: ncbigene

position:318421:-1
position: 318421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323366:-1
position: 323366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318421-323366:-1:exon

LOC117437681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437681
product: CTD nuclear envelope phosphatase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072247.1
SIO_010081: LOC117437681
subclass of: SO_0000673
so part of: LOC117437681
location: complement(join(318421..318984,319101..319185,319899..320010,320964..321080,321648..321719,321860..321978,322254..322320,323114..323366))
location: region:318421-323366:-1
so has part: feature:323114-323366:-1:exon
so has part: feature:322254-322320:-1:exon
so has part: feature:321860-321978:-1:exon
so has part: feature:321648-321719:-1:exon
so has part: feature:320964-321080:-1:exon
so has part: feature:319899-320010:-1:exon
so has part: feature:319101-319185:-1:exon
so has part: feature:318421-318984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323114-323366:-1:exon

position:323114:-1
position: 323114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322254-322320:-1:exon

position:322254:-1
position: 322254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322320:-1
position: 322320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321860-321978:-1:exon

position:321860:-1
position: 321860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321978:-1
position: 321978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321648-321719:-1:exon

position:321648:-1
position: 321648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321719:-1
position: 321719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320964-321080:-1:exon

position:320964:-1
position: 320964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321080:-1
position: 321080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319899-320010:-1:exon

position:319899:-1
position: 319899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320010:-1
position: 320010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:319101-319185:-1:exon

position:319101:-1
position: 319101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319185:-1
position: 319185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:318421-318984:-1:exon

position:318984:-1
position: 318984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTD nuclear envelope phosphatase 1
translation: MMRSQCLLGMRGFVAFAARLWSFVLYLMRRHVRTVIQYQTVRYDVLPLSPISRNRLNQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRCILSRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQHRLW
SIO_010081: LOC117437681
subclass of: SO_0000673
so part of: LOC117437681
location: complement(join(318924..318984,319101..319185,319899..320010,320964..321080,321648..321719,321860..321978,322254..322320,323114..323215))
location: region:318924-323215:-1
so has part: feature:323114-323215:-1:exon
so has part: feature:322254-322320:-1:exon
so has part: feature:321860-321978:-1:exon
so has part: feature:321648-321719:-1:exon
so has part: feature:320964-321080:-1:exon
so has part: feature:319899-320010:-1:exon
so has part: feature:319101-319185:-1:exon
so has part: feature:318924-318984:-1:exon

XP_033928138.1
type: Protein
SIO_000068: ncbiprotein

position:318924:-1
position: 318924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323215:-1
position: 323215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323114-323215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322254-322320:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321860-321978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321648-321719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320964-321080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319899-320010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319101-319185:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318924-318984:-1:exon

LOC117437688
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(324214..326128)
location: region:324214-326128:-1
so has part: feature:324214-326128:-1:exon
subclass of: SO_0000010

117437688
type: Gene
SIO_000068: ncbigene

position:324214:-1
position: 324214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326128:-1
position: 326128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324214-326128:-1:exon

LOC117437688
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437688
product: uncharacterized LOC117437688, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072258.1
SIO_010081: LOC117437688
subclass of: SO_0000673
so part of: LOC117437688
location: complement(join(324214..324339,324429..324622,325054..325241,325924..326128))
location: region:324214-326128:-1
so has part: feature:325924-326128:-1:exon
so has part: feature:325054-325241:-1:exon
so has part: feature:324429-324622:-1:exon
so has part: feature:324214-324339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325924-326128:-1:exon

position:325924:-1
position: 325924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325054-325241:-1:exon

position:325054:-1
position: 325054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325241:-1
position: 325241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324429-324622:-1:exon

position:324429:-1
position: 324429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324622:-1
position: 324622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:324214-324339:-1:exon

position:324339:-1
position: 324339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437688
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437688
product: uncharacterized LOC117437688, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034072259.1
SIO_010081: LOC117437688
subclass of: SO_0000673
so part of: LOC117437688
location: complement(join(324214..324339,324429..324622,325054..325287,325924..326128))
location: region:324214-326128:-1
so has part: feature:325924-326128:-1:exon
so has part: feature:325054-325287:-1:exon
so has part: feature:324429-324622:-1:exon
so has part: feature:324214-324339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325924-326128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325054-325287:-1:exon

position:325287:-1
position: 325287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324429-324622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324214-324339:-1:exon

LOC117437688
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117437688 isoform X1
translation: MDVGGLLGALGGRGSPGPSPTLLLDSLSWLLLRMRPPHVGGAIAGLLRGGTEGGRVVALLHEDLHPPSLVRALGAMATAQLVLGGPAPMATPLSQATPPRLVRVLTRPRRGGGTQKDEAFTVHPNGTLGVPPPLLATEGEGGGPSPTPPSGGAPSPITFRLRLSGAERAARAAVTPPYEHRSSMQGVPIDPDPPEDEDPDEDLDV
SIO_010081: LOC117437688
subclass of: SO_0000673
so part of: LOC117437688
location: complement(join(324264..324339,324429..324622,325054..325241,325924..326083))
location: region:324264-326083:-1
so has part: feature:325924-326083:-1:exon
so has part: feature:325054-325241:-1:exon
so has part: feature:324429-324622:-1:exon
so has part: feature:324264-324339:-1:exon

XP_033928149.1
type: Protein
SIO_000068: ncbiprotein

position:324264:-1
position: 324264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326083:-1
position: 326083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325924-326083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325054-325241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324429-324622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324264-324339:-1:exon

LOC117437688
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117437688 isoform X2
translation: MAPIGINGAPTPPGRVVALLHEDLHPPSLVRALGAMATAQLVLGGPAPMATPLSQATPPRLVRVLTRPRRGGGTQKDEAFTVHPNGTLGVPPPLLATEGEGGGPSPTPPSGGAPSPITFRLRLSGAERAARAAVTPPYEHRSSMQGVPIDPDPPEDEDPDEDLDV
SIO_010081: LOC117437688
subclass of: SO_0000673
so part of: LOC117437688
location: complement(join(324264..324339,324429..324622,325054..325281))
location: region:324264-325281:-1
so has part: feature:325054-325281:-1:exon
so has part: feature:324429-324622:-1:exon
so has part: feature:324264-324339:-1:exon

XP_033928150.1
type: Protein
SIO_000068: ncbiprotein

position:325281:-1
position: 325281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325054-325281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324429-324622:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324264-324339:-1:exon

LOC117437683
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(326666..327742)
location: region:326666-327742:-1
so has part: feature:326666-327742:-1:exon
subclass of: SO_0000010

117437683
type: Gene
SIO_000068: ncbigene

position:326666:-1
position: 326666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327742:-1
position: 327742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326666-327742:-1:exon

LOC117437683
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437683
product: elongator complex protein 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072251.1
SIO_010081: LOC117437683
subclass of: SO_0000673
so part of: LOC117437683
location: complement(join(326666..326768,326939..326999,327613..327742))
location: region:326666-327742:-1
so has part: feature:327613-327742:-1:exon
so has part: feature:326939-326999:-1:exon
so has part: feature:326666-326768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327613-327742:-1:exon

position:327613:-1
position: 327613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326939-326999:-1:exon

position:326939:-1
position: 326939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326999:-1
position: 326999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:326666-326768:-1:exon

position:326768:-1
position: 326768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437683
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437683
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongator complex protein 5-like
translation: MGSDVIAPRMRAASEGGAKMAAPRSGLLQALVEGGASGLVLVRDSAACEGRSLLRAFATAAVKRSEPVLVVLLDVPRESFEAGLSPDVKQR
SIO_010081: LOC117437683
subclass of: SO_0000673
so part of: LOC117437683
location: complement(join(326684..326768,326939..326999,327613..327742))
location: region:326684-327742:-1
so has part: feature:327613-327742:-1:exon
so has part: feature:326939-326999:-1:exon
so has part: feature:326684-326768:-1:exon

XP_033928142.1
type: Protein
SIO_000068: ncbiprotein

position:326684:-1
position: 326684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327613-327742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326939-326999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326684-326768:-1:exon

LOC101868393
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868393
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(327744..330038)
location: region:327744-330038:-1
so has part: feature:327744-330038:-1:exon
subclass of: SO_0000010

101868393
type: Gene
SIO_000068: ncbigene

position:327744:-1
position: 327744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330038:-1
position: 330038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327744-330038:-1:exon

LOC101868393
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868393
product: mediator complex subunit 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072250.1
SIO_010081: LOC101868393
subclass of: SO_0000673
so part of: LOC101868393
location: complement(join(327744..327977,328683..328813,329774..330038))
location: region:327744-330038:-1
so has part: feature:329774-330038:-1:exon
so has part: feature:328683-328813:-1:exon
so has part: feature:327744-327977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329774-330038:-1:exon

position:329774:-1
position: 329774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328683-328813:-1:exon

position:328683:-1
position: 328683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328813:-1
position: 328813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327744-327977:-1:exon

position:327977:-1
position: 327977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101868393
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868393
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 11
translation: MAGYAVANDRLRVLEELEREIAAALQSAGLVILELSKEKPGERLLERQAAQFSAAVLKVEAELSAQIRYLTQVATGQPHEGSTYGARKSCQLALNRLDYARLKLGDVARACEQLLDA
SIO_010081: LOC101868393
subclass of: SO_0000673
so part of: LOC101868393
location: complement(join(327840..327977,328683..328813,329774..329858))
location: region:327840-329858:-1
so has part: feature:329774-329858:-1:exon
so has part: feature:328683-328813:-1:exon
so has part: feature:327840-327977:-1:exon

XP_033928141.1
type: Protein
SIO_000068: ncbiprotein

position:327840:-1
position: 327840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329858:-1
position: 329858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329774-329858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328683-328813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327840-327977:-1:exon

LOC117437666
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437666
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 330202..344051
location: region:330202-344051:1
so has part: feature:330202-344051:1:exon
subclass of: SO_0000010

117437666
type: Gene
SIO_000068: ncbigene

position:330202:1
position: 330202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344051:1
position: 344051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330202-344051:1:exon

LOC117437666
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437666
product: proline, glutamate and leucine rich protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072221.1
SIO_010081: LOC117437666
subclass of: SO_0000673
so part of: LOC117437666
location: join(330202..330351,331040..331104,331686..331791,332351..332500,333290..333361,334051..334110,334888..335038,335650..335779,336360..336447,337133..337221,337908..338021,338450..338600,339258..339390,339670..339725,340606..340813,341492..341566,341823..342816,343776..344051)
location: region:330202-344051:1
so has part: feature:330202-330351:1:exon
so has part: feature:331040-331104:1:exon
so has part: feature:331686-331791:1:exon
so has part: feature:332351-332500:1:exon
so has part: feature:333290-333361:1:exon
so has part: feature:334051-334110:1:exon
so has part: feature:334888-335038:1:exon
so has part: feature:335650-335779:1:exon
so has part: feature:336360-336447:1:exon
so has part: feature:337133-337221:1:exon
so has part: feature:337908-338021:1:exon
so has part: feature:338450-338600:1:exon
so has part: feature:339258-339390:1:exon
so has part: feature:339670-339725:1:exon
so has part: feature:340606-340813:1:exon
so has part: feature:341492-341566:1:exon
so has part: feature:341823-342816:1:exon
so has part: feature:343776-344051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330202-330351:1:exon

position:330351:1
position: 330351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331040-331104:1:exon

position:331040:1
position: 331040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331104:1
position: 331104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:331686-331791:1:exon

position:331686:1
position: 331686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331791:1
position: 331791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332351-332500:1:exon

position:332351:1
position: 332351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332500:1
position: 332500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333290-333361:1:exon

position:333290:1
position: 333290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333361:1
position: 333361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:334051-334110:1:exon

position:334051:1
position: 334051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334110:1
position: 334110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:334888-335038:1:exon

position:334888:1
position: 334888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335038:1
position: 335038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:335650-335779:1:exon

position:335650:1
position: 335650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335779:1
position: 335779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:336360-336447:1:exon

position:336360:1
position: 336360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336447:1
position: 336447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:337133-337221:1:exon

position:337133:1
position: 337133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337221:1
position: 337221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:337908-338021:1:exon

position:337908:1
position: 337908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338021:1
position: 338021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:338450-338600:1:exon

position:338450:1
position: 338450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338600:1
position: 338600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:339258-339390:1:exon

position:339258:1
position: 339258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339390:1
position: 339390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:339670-339725:1:exon

position:339670:1
position: 339670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339725:1
position: 339725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:340606-340813:1:exon

position:340606:1
position: 340606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340813:1
position: 340813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:341492-341566:1:exon

position:341492:1
position: 341492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341566:1
position: 341566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:341823-342816:1:exon

position:341823:1
position: 341823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342816:1
position: 342816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:343776-344051:1:exon

position:343776:1
position: 343776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437666
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437666
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: proline-, glutamic acid- and leucine-rich protein 1
translation: MAAGCAALLEALSALPPARGALPRLVRGLRDSAGTQSAQAIGGLVGVTSARLSSMKTRFEGLCLLSLLVSESPTEPFTQHCLGWLRALQHLLQSQDPAPTMALGVLVLRELLRFSSQLPELARDIGTDHIPGMLTSLLALRPECEVSTLEGIKACMSFYPRACGSMRGKLAAYFLARIDSDSPQVQQLACECYALVPALGRGFAQGLRHTEAWQQELQGLLATLHALLGELFEGCESEPLPYEGPGVELLLPAPPDGDPSISLTLHKRCSGLARVLQLLLSKEFVAPVTVPVQDILDLVCRALSITPKTINAAGDGALRLLLLPAVHLDALDVLEALVLACGARLVRWGSALARLFPQVLSAWSGAREALPGQEKPFGEVRARLYHVMELWAQVGGASCGLLQQPGAATEALLSHVMGDIAPPCDSLRLKAEAKPSAPKRPKLGGGPDGDPPPLHRKQEPAANSDVCRAALKALRRIILTGGSLIKEDIHRRLQELLVPLVLSVPSACSTSGSPYASAPCREALYHLLLALVLVPAPAAPPPLHCAIQAFTMGQRDPALQVSSACTEALIITNALVRPWVPPLRAPIFIHYEREEASDVEISLESDSDDSVVIVPKRGGPPLPSPPPLPPPPPPPPPPPPGLPPLPPIPPLGQAGDEVAPPPPPPPPPPPPPLPPAPPLSSSSPPPPSSSSPPPPPLPLPAPPPEVEMDPAVININSSEEEEEEEFGEEEEEEEEEEEFYEEEEEEEDYEEEEEYEEEEEYEEGLSEEEEEEEEEEGNPPPLPPPGYGGSADGGGGCSERCPPPRGGGGRSPPRAHRHGNGKGGGRGRGKGAWPEPRPAPSAPGPAPCAPGHAPCAPGPAHALAGGGAAESARGR
SIO_010081: LOC117437666
subclass of: SO_0000673
so part of: LOC117437666
location: join(330244..330351,331040..331104,331686..331791,332351..332500,333290..333361,334051..334110,334888..335038,335650..335779,336360..336447,337133..337221,337908..338021,338450..338600,339258..339390,339670..339725,340606..340813,341492..341566,341823..342695)
location: region:330244-342695:1
so has part: feature:330244-330351:1:exon
so has part: feature:331040-331104:1:exon
so has part: feature:331686-331791:1:exon
so has part: feature:332351-332500:1:exon
so has part: feature:333290-333361:1:exon
so has part: feature:334051-334110:1:exon
so has part: feature:334888-335038:1:exon
so has part: feature:335650-335779:1:exon
so has part: feature:336360-336447:1:exon
so has part: feature:337133-337221:1:exon
so has part: feature:337908-338021:1:exon
so has part: feature:338450-338600:1:exon
so has part: feature:339258-339390:1:exon
so has part: feature:339670-339725:1:exon
so has part: feature:340606-340813:1:exon
so has part: feature:341492-341566:1:exon
so has part: feature:341823-342695:1:exon

XP_033928112.1
type: Protein
SIO_000068: ncbiprotein

position:330244:1
position: 330244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342695:1
position: 342695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330244-330351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331040-331104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:331686-331791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332351-332500:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333290-333361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334051-334110:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:334888-335038:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:335650-335779:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:336360-336447:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:337133-337221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:337908-338021:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338450-338600:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:339258-339390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:339670-339725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:340606-340813:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:341492-341566:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:341823-342695:1:exon

LOC117437672
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 344219..349083
location: region:344219-349083:1
so has part: feature:344219-349083:1:exon
subclass of: SO_0000010

117437672
type: Gene
SIO_000068: ncbigene

position:344219:1
position: 344219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349083:1
position: 349083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344219-349083:1:exon

LOC117437672
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437672
product: small nuclear RNA activating complex polypeptide 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072233.1
SIO_010081: LOC117437672
subclass of: SO_0000673
so part of: LOC117437672
location: join(344219..344533,345219..345326,346136..346204,346749..347106,348820..349083)
location: region:344219-349083:1
so has part: feature:344219-344533:1:exon
so has part: feature:345219-345326:1:exon
so has part: feature:346136-346204:1:exon
so has part: feature:346749-347106:1:exon
so has part: feature:348820-349083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344219-344533:1:exon

position:344533:1
position: 344533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:345219-345326:1:exon

position:345219:1
position: 345219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345326:1
position: 345326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346136-346204:1:exon

position:346136:1
position: 346136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346204:1
position: 346204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:346749-347106:1:exon

position:346749:1
position: 346749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347106:1
position: 347106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:348820-349083:1:exon

position:348820:1
position: 348820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437672
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: snRNA-activating protein complex subunit 2
translation: MKPPVRPRWAPLRFSASVPDGPRGTWTEREKRTLLRELRNRNLRDRNRNRDLRDPELRERLPRRSEAEIQAFLCRLRGRAAREALCGQFRHCLGQPRPRPAPIEVWLEVASVLSEGLEEAAMAAFGQVFTVAGTEPLSLSLAPPSEPPRSQSEPVPSEPRPSEPRSSQSEPVPSEPRPSGPRPLPSEPGSVQSDPLPPEPRPSEPAAVQSGAPPPEPRPLHVDFQRVYEYLGRLSRDGRGPAPPPGESLLLLALLGSLPLELGSLDLGALRNHFRGVYSDLTGPPPAPPEAPPPGLGPAPSPWAELGLSPLNLFRVPLRLLRRGGVTSG
SIO_010081: LOC117437672
subclass of: SO_0000673
so part of: LOC117437672
location: join(344330..344533,345219..345326,346136..346204,346749..347106,348820..349070)
location: region:344330-349070:1
so has part: feature:344330-344533:1:exon
so has part: feature:345219-345326:1:exon
so has part: feature:346136-346204:1:exon
so has part: feature:346749-347106:1:exon
so has part: feature:348820-349070:1:exon

XP_033928124.1
type: Protein
SIO_000068: ncbiprotein

position:344330:1
position: 344330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349070:1
position: 349070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344330-344533:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:345219-345326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346136-346204:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346749-347106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348820-349070:1:exon

LOC117437667
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 349983..361814
location: region:349983-361814:1
so has part: feature:349983-361814:1:exon

117437667
type: Gene
SIO_000068: ncbigene

position:349983:1
position: 349983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361814:1
position: 361814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349983-361814:1:exon

LOC117437667
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC117437667
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117437667
subclass of: SO_0000673
so part of: LOC117437667
location: 349983..350121
location: region:349983-350121:1
so has part: feature:349983-350121:1:exon

position:350121:1
position: 350121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349983-350121:1:exon

LOC117437667
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC117437667
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117437667
subclass of: SO_0000673
so part of: LOC117437667
location: 350789..350874
location: region:350789-350874:1
so has part: feature:350789-350874:1:exon

position:350789:1
position: 350789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350874:1
position: 350874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350789-350874:1:exon

LOC117437667
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC117437667
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117437667
subclass of: SO_0000673
so part of: LOC117437667
location: 351426..351478
location: region:351426-351478:1
so has part: feature:351426-351478:1:exon

position:351426:1
position: 351426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351478:1
position: 351478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351426-351478:1:exon

LOC117437667
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC117437667
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117437667
subclass of: SO_0000673
so part of: LOC117437667
location: 351900..352000
location: region:351900-352000:1
so has part: feature:351900-352000:1:exon

position:351900:1
position: 351900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352000:1
position: 352000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351900-352000:1:exon

LOC117437667
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC117437667
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117437667
subclass of: SO_0000673
so part of: LOC117437667
location: 352528..352624
location: region:352528-352624:1
so has part: feature:352528-352624:1:exon

position:352528:1
position: 352528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352624:1
position: 352624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352528-352624:1:exon

LOC115945743
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945743
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 353632..353783
location: region:353632-353783:1
so has part: feature:353632-353783:1:exon
subclass of: SO_0000578

115945743
type: Gene
SIO_000068: ncbigene

position:353632:1
position: 353632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353783:1
position: 353783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353632-353783:1:exon

LOC115945743
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: snoRNA
gene: LOC115945743
product: U8 small nucleolar RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00096
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004079991.2
SIO_010081: LOC115945743
subclass of: SO_0000673
so part of: LOC115945743
location: 353632..353783
location: region:353632-353783:1
so has part: feature:353632-353783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353632-353783:1:exon

LOC117437667
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC117437667
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117437667
subclass of: SO_0000673
so part of: LOC117437667
location: 355847..355966
location: region:355847-355966:1
so has part: feature:355847-355966:1:exon

position:355847:1
position: 355847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355966:1
position: 355966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355847-355966:1:exon

LOC117437667
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC117437667
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117437667
subclass of: SO_0000673
so part of: LOC117437667
location: 356801..356960
location: region:356801-356960:1
so has part: feature:356801-356960:1:exon

position:356801:1
position: 356801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356960:1
position: 356960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356801-356960:1:exon

LOC117437667
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC117437667
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117437667
subclass of: SO_0000673
so part of: LOC117437667
location: 357752..357802
location: region:357752-357802:1
so has part: feature:357752-357802:1:exon

position:357752:1
position: 357752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357802:1
position: 357802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357752-357802:1:exon

LOC117437667
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC117437667
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117437667
subclass of: SO_0000673
so part of: LOC117437667
location: 361708..361814
location: region:361708-361814:1
so has part: feature:361708-361814:1:exon

position:361708:1
position: 361708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361708-361814:1:exon

LOC117437678
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 368574..369855
location: region:368574-369855:1
so has part: feature:368574-369855:1:exon
subclass of: SO_0000011

117437678
type: Gene
SIO_000068: ncbigene

position:368574:1
position: 368574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369855:1
position: 369855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368574-369855:1:exon

LOC117437678
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437678
product: uncharacterized LOC117437678
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550490.1
SIO_010081: LOC117437678
subclass of: SO_0000673
so part of: LOC117437678
location: join(368574..368614,369149..369245,369786..369855)
location: region:368574-369855:1
so has part: feature:368574-368614:1:exon
so has part: feature:369149-369245:1:exon
so has part: feature:369786-369855:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368574-368614:1:exon

position:368614:1
position: 368614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:369149-369245:1:exon

position:369149:1
position: 369149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369245:1
position: 369245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:369786-369855:1:exon

position:369786:1
position: 369786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437691
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437691
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 370244..370394
location: region:370244-370394:1
so has part: feature:370244-370394:1:exon
subclass of: SO_0000578

117437691
type: Gene
SIO_000068: ncbigene

position:370244:1
position: 370244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370394:1
position: 370394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370244-370394:1:exon

LOC117437691
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: snoRNA
gene: LOC117437691
product: U8 small nucleolar RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00096
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004550492.1
SIO_010081: LOC117437691
subclass of: SO_0000673
so part of: LOC117437691
location: 370244..370394
location: region:370244-370394:1
so has part: feature:370244-370394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370244-370394:1:exon

LOC117437677
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 371374..375200
location: region:371374-375200:1
so has part: feature:371374-375200:1:exon
subclass of: SO_0000010

117437677
type: Gene
SIO_000068: ncbigene

position:371374:1
position: 371374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375200:1
position: 375200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371374-375200:1:exon

LOC117437677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437677
product: vesicle-associated membrane protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034072240.1
SIO_010081: LOC117437677
subclass of: SO_0000673
so part of: LOC117437677
location: join(371374..371427,372482..372602,373447..373605,374418..374469,375081..375200)
location: region:371374-375200:1
so has part: feature:371374-371427:1:exon
so has part: feature:372482-372602:1:exon
so has part: feature:373447-373605:1:exon
so has part: feature:374418-374469:1:exon
so has part: feature:375081-375200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371374-371427:1:exon

position:371427:1
position: 371427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:372482-372602:1:exon

position:372482:1
position: 372482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372602:1
position: 372602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373447-373605:1:exon

position:373447:1
position: 373447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373605:1
position: 373605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:374418-374469:1:exon

position:374418:1
position: 374418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374469:1
position: 374469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:375081-375200:1:exon

position:375081:1
position: 375081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein 2
translation: MSAPAAPSAPPPAAEGGGAPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMIILGVICAIVLIIIIVYLST
SIO_010081: LOC117437677
subclass of: SO_0000673
so part of: LOC117437677
location: join(371426..371427,372482..372602,373447..373605,374418..374469,375081..375097)
location: region:371426-375097:1
so has part: feature:371426-371427:1:exon
so has part: feature:372482-372602:1:exon
so has part: feature:373447-373605:1:exon
so has part: feature:374418-374469:1:exon
so has part: feature:375081-375097:1:exon

XP_033928131.1
type: Protein
SIO_000068: ncbiprotein

position:371426:1
position: 371426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375097:1
position: 375097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371426-371427:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:372482-372602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373447-373605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374418-374469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375081-375097:1:exon

LOC117437670
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(377473..391905)
location: region:377473-391905:-1
so has part: feature:377473-391905:-1:exon
subclass of: SO_0000010

117437670
type: Gene
SIO_000068: ncbigene

position:377473:-1
position: 377473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391905:-1
position: 391905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377473-391905:-1:exon

LOC117437670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437670
product: multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072228.1
SIO_010081: LOC117437670
subclass of: SO_0000673
so part of: LOC117437670
location: complement(join(377473..377701,378168..378281,378764..378880,379293..379391,379826..379891,380272..380385,380953..381094,381747..381872,382447..382551,383177..383298,384485..384616,386260..386357,386929..386992,387540..387652,388832..389004,390073..390209,390894..390985,391786..391905))
location: region:377473-391905:-1
so has part: feature:391786-391905:-1:exon
so has part: feature:390894-390985:-1:exon
so has part: feature:390073-390209:-1:exon
so has part: feature:388832-389004:-1:exon
so has part: feature:387540-387652:-1:exon
so has part: feature:386929-386992:-1:exon
so has part: feature:386260-386357:-1:exon
so has part: feature:384485-384616:-1:exon
so has part: feature:383177-383298:-1:exon
so has part: feature:382447-382551:-1:exon
so has part: feature:381747-381872:-1:exon
so has part: feature:380953-381094:-1:exon
so has part: feature:380272-380385:-1:exon
so has part: feature:379826-379891:-1:exon
so has part: feature:379293-379391:-1:exon
so has part: feature:378764-378880:-1:exon
so has part: feature:378168-378281:-1:exon
so has part: feature:377473-377701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391786-391905:-1:exon

position:391786:-1
position: 391786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390894-390985:-1:exon

position:390894:-1
position: 390894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390985:-1
position: 390985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:390073-390209:-1:exon

position:390073:-1
position: 390073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390209:-1
position: 390209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:388832-389004:-1:exon

position:388832:-1
position: 388832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389004:-1
position: 389004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:387540-387652:-1:exon

position:387540:-1
position: 387540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387652:-1
position: 387652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:386929-386992:-1:exon

position:386929:-1
position: 386929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386992:-1
position: 386992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:386260-386357:-1:exon

position:386260:-1
position: 386260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386357:-1
position: 386357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:384485-384616:-1:exon

position:384485:-1
position: 384485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384616:-1
position: 384616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:383177-383298:-1:exon

position:383177:-1
position: 383177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383298:-1
position: 383298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:382447-382551:-1:exon

position:382447:-1
position: 382447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382551:-1
position: 382551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:381747-381872:-1:exon

position:381747:-1
position: 381747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381872:-1
position: 381872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:380953-381094:-1:exon

position:380953:-1
position: 380953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381094:-1
position: 381094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:380272-380385:-1:exon

position:380272:-1
position: 380272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380385:-1
position: 380385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:379826-379891:-1:exon

position:379826:-1
position: 379826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379891:-1
position: 379891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:379293-379391:-1:exon

position:379293:-1
position: 379293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379391:-1
position: 379391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:378764-378880:-1:exon

position:378764:-1
position: 378764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378880:-1
position: 378880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:378168-378281:-1:exon

position:378168:-1
position: 378168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378281:-1
position: 378281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:377473-377701:-1:exon

position:377701:-1
position: 377701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437670
product: multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072227.1
SIO_010081: LOC117437670
subclass of: SO_0000673
so part of: LOC117437670
location: complement(join(377473..377701,378168..378281,378764..378880,379293..379391,379826..379891,380272..380385,380953..381094,381747..381872,382447..382551,383177..383298,384485..384616,385579..385677,386260..386357,386929..386992,387540..387652,388832..389004,390073..390209,390894..390985,391786..391905))
location: region:377473-391905:-1
so has part: feature:391786-391905:-1:exon
so has part: feature:390894-390985:-1:exon
so has part: feature:390073-390209:-1:exon
so has part: feature:388832-389004:-1:exon
so has part: feature:387540-387652:-1:exon
so has part: feature:386929-386992:-1:exon
so has part: feature:386260-386357:-1:exon
so has part: feature:385579-385677:-1:exon
so has part: feature:384485-384616:-1:exon
so has part: feature:383177-383298:-1:exon
so has part: feature:382447-382551:-1:exon
so has part: feature:381747-381872:-1:exon
so has part: feature:380953-381094:-1:exon
so has part: feature:380272-380385:-1:exon
so has part: feature:379826-379891:-1:exon
so has part: feature:379293-379391:-1:exon
so has part: feature:378764-378880:-1:exon
so has part: feature:378168-378281:-1:exon
so has part: feature:377473-377701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391786-391905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390894-390985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:390073-390209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388832-389004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387540-387652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386929-386992:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386260-386357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385579-385677:-1:exon

position:385579:-1
position: 385579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385677:-1
position: 385677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:384485-384616:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383177-383298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:382447-382551:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381747-381872:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380953-381094:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:380272-380385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:379826-379891:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379293-379391:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:378764-378880:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:378168-378281:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:377473-377701:-1:exon

LOC117437670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437670
product: multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072229.1
SIO_010081: LOC117437670
subclass of: SO_0000673
so part of: LOC117437670
location: complement(join(377473..377701,378168..378281,378764..378880,379293..379391,379826..379891,380272..380385,380953..381094,381747..381872,382447..382551,383177..383298,384485..384616,385579..385677,386260..386357,386929..386992,387540..387652,390073..390209,390894..390980,391786..391804))
location: region:377473-391804:-1
so has part: feature:391786-391804:-1:exon
so has part: feature:390894-390980:-1:exon
so has part: feature:390073-390209:-1:exon
so has part: feature:387540-387652:-1:exon
so has part: feature:386929-386992:-1:exon
so has part: feature:386260-386357:-1:exon
so has part: feature:385579-385677:-1:exon
so has part: feature:384485-384616:-1:exon
so has part: feature:383177-383298:-1:exon
so has part: feature:382447-382551:-1:exon
so has part: feature:381747-381872:-1:exon
so has part: feature:380953-381094:-1:exon
so has part: feature:380272-380385:-1:exon
so has part: feature:379826-379891:-1:exon
so has part: feature:379293-379391:-1:exon
so has part: feature:378764-378880:-1:exon
so has part: feature:378168-378281:-1:exon
so has part: feature:377473-377701:-1:exon

position:391804:-1
position: 391804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391786-391804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390894-390980:-1:exon

position:390980:-1
position: 390980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:390073-390209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387540-387652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386929-386992:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386260-386357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:385579-385677:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384485-384616:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:383177-383298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:382447-382551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381747-381872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:380953-381094:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380272-380385:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379826-379891:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:379293-379391:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:378764-378880:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:378168-378281:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:377473-377701:-1:exon

LOC117437670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like isoform X2
translation: MAPLLLLLLLPAALADLRPEQLLVLTVATERTEGYERFLRSAQRFNYSVQTLGLGQPWRGGDVAHTVGGGQKVRWLREALEPLKRRGELLVLFVDSYDVVLAGPAHELLASFSSAPPPPGLLFSAEGFCWPRGELASSYPPSPPRGKPFLNSGGFIGFAPAVWRLVEQWNHRDDDDDQLFYTQLYLQPQLREELGLALDHHSRIFQNLNGAIDEVVVKFEPGRVRVRNVASDSLPIVIHGNGPTKPEQLPWVLVGVFVEEPTPFLPRFLRRLLRWSYPGARMGLFLHNREPHHQPHVATLWPRLRSRFSFARLVGPEEGLEPAAARDLGMSLCRQDPQCQHYLSLDADVALTHMGTLRALLRQNRRVLAPLLSRPGQLWSNFWGALSPDGFYARSQDYVDIVQGNRRSVWNVPYISHAYLIEGAALRGPLGAGPVFSQSETDPDMALCQRARETGLFLHVTNREHFGHLLVTSNYNSSRKHPDLLQLPHNTQDWEQEYLHENYSRIFQESLYEEPCPDVFRFPLFSARFCRELLEEALGYGAWSQEQPGVLSVPLSRLGLDGLWMGALNRFLAPIARRLFPGYQHKGRAVFSSVVQYSPAPTGEEAPPPPAATVSVSLGLSPPRGGGWRFPRYDCGVLGPPRGWVLLHPGRLTHRPQLLPPPHGTRFALVTLLEP
SIO_010081: LOC117437670
subclass of: SO_0000673
so part of: LOC117437670
location: complement(join(377546..377701,378168..378281,378764..378880,379293..379391,379826..379891,380272..380385,380953..381094,381747..381872,382447..382551,383177..383298,384485..384616,386260..386357,386929..386992,387540..387652,388832..389004,390073..390209,390894..390985,391786..391843))
location: region:377546-391843:-1
so has part: feature:391786-391843:-1:exon
so has part: feature:390894-390985:-1:exon
so has part: feature:390073-390209:-1:exon
so has part: feature:388832-389004:-1:exon
so has part: feature:387540-387652:-1:exon
so has part: feature:386929-386992:-1:exon
so has part: feature:386260-386357:-1:exon
so has part: feature:384485-384616:-1:exon
so has part: feature:383177-383298:-1:exon
so has part: feature:382447-382551:-1:exon
so has part: feature:381747-381872:-1:exon
so has part: feature:380953-381094:-1:exon
so has part: feature:380272-380385:-1:exon
so has part: feature:379826-379891:-1:exon
so has part: feature:379293-379391:-1:exon
so has part: feature:378764-378880:-1:exon
so has part: feature:378168-378281:-1:exon
so has part: feature:377546-377701:-1:exon

XP_033928119.1
type: Protein
SIO_000068: ncbiprotein

position:377546:-1
position: 377546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391843:-1
position: 391843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391786-391843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390894-390985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:390073-390209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388832-389004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387540-387652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386929-386992:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386260-386357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384485-384616:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:383177-383298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:382447-382551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381747-381872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:380953-381094:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380272-380385:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379826-379891:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:379293-379391:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:378764-378880:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:378168-378281:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:377546-377701:-1:exon

LOC117437670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like isoform X1
translation: MAPLLLLLLLPAALADLRPEQLLVLTVATERTEGYERFLRSAQRFNYSVQTLGLGQPWRGGDVAHTVGGGQKVRWLREALEPLKRRGELLVLFVDSYDVVLAGPAHELLASFSSAPPPPGLLFSAEGFCWPRGELASSYPPSPPRGKPFLNSGGFIGFAPAVWRLVEQWNHRDDDDDQLFYTQLYLQPQLREELGLALDHHSRIFQNLNGAIDEVVVKFEPGRVRVRNVASDSLPIVIHGNGPTKLQLNYLGNYVPWGWSPEGCGDCDHGLRDLRGLKPEQLPWVLVGVFVEEPTPFLPRFLRRLLRWSYPGARMGLFLHNREPHHQPHVATLWPRLRSRFSFARLVGPEEGLEPAAARDLGMSLCRQDPQCQHYLSLDADVALTHMGTLRALLRQNRRVLAPLLSRPGQLWSNFWGALSPDGFYARSQDYVDIVQGNRRSVWNVPYISHAYLIEGAALRGPLGAGPVFSQSETDPDMALCQRARETGLFLHVTNREHFGHLLVTSNYNSSRKHPDLLQLPHNTQDWEQEYLHENYSRIFQESLYEEPCPDVFRFPLFSARFCRELLEEALGYGAWSQEQPGVLSVPLSRLGLDGLWMGALNRFLAPIARRLFPGYQHKGRAVFSSVVQYSPAPTGEEAPPPPAATVSVSLGLSPPRGGGWRFPRYDCGVLGPPRGWVLLHPGRLTHRPQLLPPPHGTRFALVTLLEP
SIO_010081: LOC117437670
subclass of: SO_0000673
so part of: LOC117437670
location: complement(join(377546..377701,378168..378281,378764..378880,379293..379391,379826..379891,380272..380385,380953..381094,381747..381872,382447..382551,383177..383298,384485..384616,385579..385677,386260..386357,386929..386992,387540..387652,388832..389004,390073..390209,390894..390985,391786..391843))
location: region:377546-391843:-1
so has part: feature:391786-391843:-1:exon
so has part: feature:390894-390985:-1:exon
so has part: feature:390073-390209:-1:exon
so has part: feature:388832-389004:-1:exon
so has part: feature:387540-387652:-1:exon
so has part: feature:386929-386992:-1:exon
so has part: feature:386260-386357:-1:exon
so has part: feature:385579-385677:-1:exon
so has part: feature:384485-384616:-1:exon
so has part: feature:383177-383298:-1:exon
so has part: feature:382447-382551:-1:exon
so has part: feature:381747-381872:-1:exon
so has part: feature:380953-381094:-1:exon
so has part: feature:380272-380385:-1:exon
so has part: feature:379826-379891:-1:exon
so has part: feature:379293-379391:-1:exon
so has part: feature:378764-378880:-1:exon
so has part: feature:378168-378281:-1:exon
so has part: feature:377546-377701:-1:exon

XP_033928118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391786-391843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390894-390985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:390073-390209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388832-389004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387540-387652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386929-386992:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386260-386357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385579-385677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384485-384616:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:383177-383298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:382447-382551:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381747-381872:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380953-381094:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:380272-380385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:379826-379891:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379293-379391:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:378764-378880:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:378168-378281:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:377546-377701:-1:exon

LOC117437670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like isoform X3
translation: MSGSCARLSASITAFRRWAWGSPGGGGTWPTPWGGGRRFDGCGRPWSRSRGGGSSWCCSWTGFIGFAPAVWRLVEQWNHRDDDDDQLFYTQLYLQPQLREELGLALDHHSRIFQNLNGAIDEVVVKFEPGRVRVRNVASDSLPIVIHGNGPTKLQLNYLGNYVPWGWSPEGCGDCDHGLRDLRGLKPEQLPWVLVGVFVEEPTPFLPRFLRRLLRWSYPGARMGLFLHNREPHHQPHVATLWPRLRSRFSFARLVGPEEGLEPAAARDLGMSLCRQDPQCQHYLSLDADVALTHMGTLRALLRQNRRVLAPLLSRPGQLWSNFWGALSPDGFYARSQDYVDIVQGNRRSVWNVPYISHAYLIEGAALRGPLGAGPVFSQSETDPDMALCQRARETGLFLHVTNREHFGHLLVTSNYNSSRKHPDLLQLPHNTQDWEQEYLHENYSRIFQESLYEEPCPDVFRFPLFSARFCRELLEEALGYGAWSQEQPGVLSVPLSRLGLDGLWMGALNRFLAPIARRLFPGYQHKGRAVFSSVVQYSPAPTGEEAPPPPAATVSVSLGLSPPRGGGWRFPRYDCGVLGPPRGWVLLHPGRLTHRPQLLPPPHGTRFALVTLLEP
SIO_010081: LOC117437670
subclass of: SO_0000673
so part of: LOC117437670
location: complement(join(377546..377701,378168..378281,378764..378880,379293..379391,379826..379891,380272..380385,380953..381094,381747..381872,382447..382551,383177..383298,384485..384616,385579..385677,386260..386357,386929..386992,387540..387652,390073..390209,390894..390940))
location: region:377546-390940:-1
so has part: feature:390894-390940:-1:exon
so has part: feature:390073-390209:-1:exon
so has part: feature:387540-387652:-1:exon
so has part: feature:386929-386992:-1:exon
so has part: feature:386260-386357:-1:exon
so has part: feature:385579-385677:-1:exon
so has part: feature:384485-384616:-1:exon
so has part: feature:383177-383298:-1:exon
so has part: feature:382447-382551:-1:exon
so has part: feature:381747-381872:-1:exon
so has part: feature:380953-381094:-1:exon
so has part: feature:380272-380385:-1:exon
so has part: feature:379826-379891:-1:exon
so has part: feature:379293-379391:-1:exon
so has part: feature:378764-378880:-1:exon
so has part: feature:378168-378281:-1:exon
so has part: feature:377546-377701:-1:exon

XP_033928120.1
type: Protein
SIO_000068: ncbiprotein

position:390940:-1
position: 390940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390894-390940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390073-390209:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387540-387652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386929-386992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386260-386357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:385579-385677:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:384485-384616:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:383177-383298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382447-382551:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:381747-381872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380953-381094:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:380272-380385:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:379826-379891:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379293-379391:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:378764-378880:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:378168-378281:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:377546-377701:-1:exon

LOC117437673
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 392505..397920
location: region:392505-397920:1
so has part: feature:392505-397920:1:exon
subclass of: SO_0000010

117437673
type: Gene
SIO_000068: ncbigene

position:392505:1
position: 392505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397920:1
position: 397920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392505-397920:1:exon

LOC117437673
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437673
product: zinc finger HIT-type containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072234.1
SIO_010081: LOC117437673
subclass of: SO_0000673
so part of: LOC117437673
location: join(392505..392564,393371..393541,396048..396127,396526..396704,397748..397920)
location: region:392505-397920:1
so has part: feature:392505-392564:1:exon
so has part: feature:393371-393541:1:exon
so has part: feature:396048-396127:1:exon
so has part: feature:396526-396704:1:exon
so has part: feature:397748-397920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:392505-392564:1:exon

position:392564:1
position: 392564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393371-393541:1:exon

position:393371:1
position: 393371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393541:1
position: 393541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:396048-396127:1:exon

position:396048:1
position: 396048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396127:1
position: 396127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:396526-396704:1:exon

position:396526:1
position: 396526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396704:1
position: 396704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:397748-397920:1:exon

position:397748:1
position: 397748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437673
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger HIT domain-containing protein 1
translation: MVEKKPPGRVPEGAQRRVLDRAARQRRLHRQLEALESDNFGDDPQAGLPRPGKRLPNFSDTAETGKKKKKTRGDHFKLRFRKNFQALLEEQALSSGTAPDSPSYVSACAGPSRRPQRHFCSVCGFPSPFTCVTCGARFCCARCQGAHQDTRCLKWTV
SIO_010081: LOC117437673
subclass of: SO_0000673
so part of: LOC117437673
location: join(392543..392564,393371..393541,396048..396127,396526..396704,397748..397769)
location: region:392543-397769:1
so has part: feature:392543-392564:1:exon
so has part: feature:393371-393541:1:exon
so has part: feature:396048-396127:1:exon
so has part: feature:396526-396704:1:exon
so has part: feature:397748-397769:1:exon

XP_033928125.1
type: Protein
SIO_000068: ncbiprotein

position:392543:1
position: 392543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397769:1
position: 397769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392543-392564:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393371-393541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396048-396127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396526-396704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:397748-397769:1:exon

LOC117437668
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(398955..412545)
location: region:398955-412545:-1
so has part: feature:398955-412545:-1:exon
subclass of: SO_0000010

117437668
type: Gene
SIO_000068: ncbigene

position:398955:-1
position: 398955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412545:-1
position: 412545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398955-412545:-1:exon

LOC117437668
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437668
product: guanylate cyclase 2D, retinal
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_034072222.1
SIO_010081: LOC117437668
subclass of: SO_0000673
so part of: LOC117437668
location: complement(join(398955..399045,399561..399646,399820..399914,400254..400352,401110..401284,402323..402515,403447..403610,404141..404289,404500..404649,405090..405246,406040..406216,406775..406855,407478..407573,408017..408113,408211..408295,408924..409281,409705..410006,410948..411570,411656..412545))
location: region:398955-412545:-1
so has part: feature:411656-412545:-1:exon
so has part: feature:410948-411570:-1:exon
so has part: feature:409705-410006:-1:exon
so has part: feature:408924-409281:-1:exon
so has part: feature:408211-408295:-1:exon
so has part: feature:408017-408113:-1:exon
so has part: feature:407478-407573:-1:exon
so has part: feature:406775-406855:-1:exon
so has part: feature:406040-406216:-1:exon
so has part: feature:405090-405246:-1:exon
so has part: feature:404500-404649:-1:exon
so has part: feature:404141-404289:-1:exon
so has part: feature:403447-403610:-1:exon
so has part: feature:402323-402515:-1:exon
so has part: feature:401110-401284:-1:exon
so has part: feature:400254-400352:-1:exon
so has part: feature:399820-399914:-1:exon
so has part: feature:399561-399646:-1:exon
so has part: feature:398955-399045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411656-412545:-1:exon

position:411656:-1
position: 411656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:410948-411570:-1:exon

position:410948:-1
position: 410948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411570:-1
position: 411570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:409705-410006:-1:exon

position:409705:-1
position: 409705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410006:-1
position: 410006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:408924-409281:-1:exon

position:408924:-1
position: 408924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409281:-1
position: 409281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:408211-408295:-1:exon

position:408211:-1
position: 408211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408295:-1
position: 408295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:408017-408113:-1:exon

position:408017:-1
position: 408017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408113:-1
position: 408113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407478-407573:-1:exon

position:407478:-1
position: 407478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407573:-1
position: 407573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:406775-406855:-1:exon

position:406775:-1
position: 406775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406855:-1
position: 406855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:406040-406216:-1:exon

position:406040:-1
position: 406040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406216:-1
position: 406216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:405090-405246:-1:exon

position:405090:-1
position: 405090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405246:-1
position: 405246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:404500-404649:-1:exon

position:404500:-1
position: 404500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404649:-1
position: 404649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:404141-404289:-1:exon

position:404141:-1
position: 404141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404289:-1
position: 404289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:403447-403610:-1:exon

position:403447:-1
position: 403447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403610:-1
position: 403610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:402323-402515:-1:exon

position:402323:-1
position: 402323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402515:-1
position: 402515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:401110-401284:-1:exon

position:401110:-1
position: 401110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401284:-1
position: 401284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:400254-400352:-1:exon

position:400254:-1
position: 400254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400352:-1
position: 400352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:399820-399914:-1:exon

position:399820:-1
position: 399820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399914:-1
position: 399914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:399561-399646:-1:exon

position:399561:-1
position: 399561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399646:-1
position: 399646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:398955-399045:-1:exon

position:399045:-1
position: 399045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437668
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinal guanylyl cyclase 1
translation: MAPAGISGDFNGGFNGDVNGDVNEGFNEAINGDVNGGFNGDFNVDVNGGVNGGFNEAINGDVNGGFNGGFNGSTNGDVNGGVNEDINRDFNGGFNGDFNGSTNGDVNGGINEDINRDFNGGFNGDFNGSFNGAVNGGFNEDINGDINGDIIVNGDIIANGDISKEDLVHGGISNGSNNGDISNGGIFHSGISYNGFSNGITSYSSISNGCVSNDGIISNGFTSNNSISNGSNNGDISNRSTSNGGISNGSLNGDINGDISNGGTSNGSINGSINGNINGDISNGSINGDINGDLSNGPFLFLLLLLLLPPPPTHTATFKVGVMGPWSCDPILARAYPELASRLATTRLNGDPNYNQVYWWEPLVLSESCSPSQAAMGLLNVDRYASSLVGPISPGACGAAALLMAAWNKPLVAWSCTGNGAGMETLVPPMPAPVEVLHVVLSSFRWAHVAVVAAPQELWRDVGQAVAQGLRAKGLPVSVVVVAGAEEEEAKEALRKVKRADGVRVVLMCMHSALLGGAEQRVLLESAAELGMADGSFVFIPYDALTFPLPYRDEAYADLANSSRLRRAHDAVLTVTMDSANGSFRQELRQAQRDGEIPAHVDPMQVHPLFTTIYNSIRALAAAVEATRRAGRWVMGTSVARGYRDLFIDGLCQSLSVDADGAVGVPYVVLDTDGRGDRLWPVYGLEPGARRLSRRERAAHWPRGAGPPGSDAGCWFEEGSVCNGGVDASIVLLMMVLICALAAAGAALACFIRRRMHQAQLMKGPNKIILTMDDLTFINTHSCKQLDGSRTSLAAHSTGDTKSAAATPDTTNVAIAEGDWVWLKRFPGDEHREVKPATKLAFCKLRDLRHENVNLFLGFFHSGGVLALVSEHCSRGSLQDLLHDQDMKLDWMFKSSLLIDLIKGIRYLHHRDVVHGRLKSRNCVVDGRFVLKVTDHGYNELLEAQRVPTAPLEPQERLWTAPELLRDEALERRGSFRGDVYGIGIIMQEVICRNGPYCMLGLPPEEIIEKVRTPPPLCRPTVSADQAPLECIHLMKQCWSEQPERRPHIDQVFEQFKGINKGRRTNLIDSMLRMLEQYSSNLEDLIRERTEELELEKQKTDRLLTQMLPPSVAEALKMGTPVEPEYFEEVTLYFSDIVGFTTISAMSEPIEVVDLLNDLYTLFDAIIGAHDVYKVETIGDAYMVASGLPKRNGNRHAGEIANMALDILSAVGSFRMRHMPEVPVRIRIGLHSGPCVAGVVGLTMPRYCLFGDTVNTASRMESTGLPYRIHVNARTVAILQALKEGFKLDIRGKTELKGKGVEDTYWLVGREGFTKPIPTPPDLLPGASNHGISLDEIPAERRRKLEKARPGQVPK
SIO_010081: LOC117437668
subclass of: SO_0000673
so part of: LOC117437668
location: complement(join(398955..399045,399561..399646,399820..399914,400254..400352,401110..401284,402323..402515,403447..403610,404141..404289,404500..404649,405090..405246,406040..406216,406775..406855,407478..407573,408017..408113,408211..408295,408924..409281,409705..410006,410948..411570,411656..412545))
location: region:398955-412545:-1
so has part: feature:411656-412545:-1:exon
so has part: feature:410948-411570:-1:exon
so has part: feature:409705-410006:-1:exon
so has part: feature:408924-409281:-1:exon
so has part: feature:408211-408295:-1:exon
so has part: feature:408017-408113:-1:exon
so has part: feature:407478-407573:-1:exon
so has part: feature:406775-406855:-1:exon
so has part: feature:406040-406216:-1:exon
so has part: feature:405090-405246:-1:exon
so has part: feature:404500-404649:-1:exon
so has part: feature:404141-404289:-1:exon
so has part: feature:403447-403610:-1:exon
so has part: feature:402323-402515:-1:exon
so has part: feature:401110-401284:-1:exon
so has part: feature:400254-400352:-1:exon
so has part: feature:399820-399914:-1:exon
so has part: feature:399561-399646:-1:exon
so has part: feature:398955-399045:-1:exon

XP_033928113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411656-412545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:410948-411570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:409705-410006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:408924-409281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408211-408295:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408017-408113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407478-407573:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406775-406855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406040-406216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:405090-405246:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:404500-404649:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:404141-404289:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403447-403610:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:402323-402515:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:401110-401284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:400254-400352:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:399820-399914:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399561-399646:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:398955-399045:-1:exon