Melopsittacus undulatus isolate bMelUnd1 chromosome 23, bMelUnd1.mat.Z, whole genome shotgun sequence.
type: Entry
definition: Melopsittacus undulatus isolate bMelUnd1 chromosome 23, bMelUnd1.mat.Z, whole genome shotgun sequence.
sequence version: NC_047549.1
sequence date: 2020-05-06
sequence: sequence
division: CON
label: NC_047549.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA629576
dblink: SAMN12623090
keyword: WGS
keyword: RefSeq
source: Melopsittacus undulatus (budgerigar)
organism: Melopsittacus undulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittaculidae; Melopsittacus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022654.1.\nAssembly name: bMelUnd1.mat.Z\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the G10K on 2020/04/13. The\noriginal whole-genome shotgun project has the accession\nJAAVWG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: G10K\nAssembly Date :: 24-FEB-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; Freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-02-24; VGP assembly\n pipeline v. 1.6\nAssembly Name :: bMelUnd1.mat.Z\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 61.11x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Melopsittacus undulatus Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1430276
topology: linear
so has quality: SO_0000987
location: 1..1430276
location: region:1-1430276:1
RO_0002162: 13146

NC_047549
type: RefSeq
SIO_000068: refseq

PRJNA629576
type: BioProject
SIO_000068: bioproject

SAMN12623090
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430276:1
position: 1430276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1430276:1:source
so part of: sequence
organism: Melopsittacus undulatus
mol type: genomic DNA
isolate: bMelUnd1
chromosome: 23
sex: female
tissue type: blood
dev stage: juvenile
country: USA: New Mexico State University
lat lon: 32.278282 N 106.74994 W
collection date: 02-Nov-2018
collected by: Timothy Wright, Justin Apodaca

13146
type: Taxonomy
SIO_000068: taxonomy

LOC101879167
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101879167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8148..9113)
location: region:8148-9113:-1
so has part: feature:8148-9113:-1:exon
subclass of: SO_0000010

101879167
type: Gene
SIO_000068: ncbigene

position:8148:-1
position: 8148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9113:-1
position: 9113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8148-9113:-1:exon

LOC101879167
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101879167
product: olfactory receptor 14C36-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034071948.1
SIO_010081: LOC101879167
subclass of: SO_0000673
so part of: LOC101879167
location: complement(8148..9113)
location: region:8148-9113:-1
so has part: feature:8148-9113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8148-9113:-1:exon

LOC101879167
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101879167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14C36-like
translation: MSNGSSITHFLLLPFAHTRELQLCHFWLFLGISLAALLGNGLIITSTACDQHLHTPMYFFLLNLSLLDLGCILTTVPKSMANSLWDTRAISYTGCAAQLFFFVFFMSAEYSVLTIMSYDRYVAICKPLHYGTLLGSRACVHMAAAAWASGFLNALLHTANTFSLPLCRGNAVEQFFCEIPPILKLSCSHSYLREVGLLVLGFSSAIGCFVFIVGSYVQIFKAVLRIPSEQGRHKAFSTCLPHLAVLSVIVSTGTFAYLKPPSISSPTLDLVVSVLYSVVPPAVNPLIYSLRNQELKDAVRKLVTGCVWTAIQCLLSSGKGC
SIO_010081: LOC101879167
subclass of: SO_0000673
so part of: LOC101879167
location: complement(8148..9113)
location: region:8148-9113:-1
so has part: feature:8148-9113:-1:exon

XP_033927839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8148-9113:-1:exon

LOC117437557
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15133..16859
location: region:15133-16859:1
so has part: feature:15133-16859:1:exon
subclass of: SO_0000011

117437557
type: Gene
SIO_000068: ncbigene

position:15133:1
position: 15133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16859:1
position: 16859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15133-16859:1:exon

LOC117437557
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437557
product: uncharacterized LOC117437557
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550469.1
SIO_010081: LOC117437557
subclass of: SO_0000673
so part of: LOC117437557
location: join(15133..15319,15418..15531,16769..16859)
location: region:15133-16859:1
so has part: feature:15133-15319:1:exon
so has part: feature:15418-15531:1:exon
so has part: feature:16769-16859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15133-15319:1:exon

position:15319:1
position: 15319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15418-15531:1:exon

position:15418:1
position: 15418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15531:1
position: 15531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16769-16859:1:exon

position:16769:1
position: 16769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437570
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22350..25344)
location: region:22350-25344:-1
so has part: feature:22350-25344:-1:exon
subclass of: SO_0000010

117437570
type: Gene
SIO_000068: ncbigene

position:22350:-1
position: 22350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25344:-1
position: 25344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22350-25344:-1:exon

LOC117437570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437570
product: E3 ubiquitin-protein ligase RBBP6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072076.1
SIO_010081: LOC117437570
subclass of: SO_0000673
so part of: LOC117437570
location: complement(join(22350..22440,24125..24221,25179..25344))
location: region:22350-25344:-1
so has part: feature:25179-25344:-1:exon
so has part: feature:24125-24221:-1:exon
so has part: feature:22350-22440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25179-25344:-1:exon

position:25179:-1
position: 25179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24125-24221:-1:exon

position:24125:-1
position: 24125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24221:-1
position: 24221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22350-22440:-1:exon

position:22440:-1
position: 22440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RBBP6-like
translation: MSCIHYKFFSKLDYGTVTFSGFDISLCDLKCKIMRKEKLKAANCDLQISNAQTKEEYTEDALIPKNSLVIVKRIPAGGVKATSKTDVTSRTEPVSRTSEAVRKNPISPFFSTHCTEF
SIO_010081: LOC117437570
subclass of: SO_0000673
so part of: LOC117437570
location: complement(join(22350..22440,24125..24221,25179..25344))
location: region:22350-25344:-1
so has part: feature:25179-25344:-1:exon
so has part: feature:24125-24221:-1:exon
so has part: feature:22350-22440:-1:exon

XP_033927967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25179-25344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24125-24221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22350-22440:-1:exon

LOC101870462
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101870462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(34991..35949)
location: region:34991-35949:-1
so has part: feature:34991-35949:-1:exon

101870462
type: Gene
SIO_000068: ncbigene

position:34991:-1
position: 34991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35949:-1
position: 35949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34991-35949:-1:exon

LOC101870462
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC101870462
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC101870462
subclass of: SO_0000673
so part of: LOC101870462
location: complement(34991..35949)
location: region:34991-35949:-1
so has part: feature:34991-35949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34991-35949:-1:exon

LOC117437538
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75038..83995)
location: region:75038-83995:-1
so has part: feature:75038-83995:-1:exon
subclass of: SO_0000010

117437538
type: Gene
SIO_000068: ncbigene

position:75038:-1
position: 75038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83995:-1
position: 83995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75038-83995:-1:exon

LOC117437538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437538
product: cysteine protease ATG4D-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071981.1
SIO_010081: LOC117437538
subclass of: SO_0000673
so part of: LOC117437538
location: complement(join(75038..75716,75805..75924,76015..76091,76180..76258,78197..78312,78411..78475,80138..80336,82326..82496,83899..83995))
location: region:75038-83995:-1
so has part: feature:83899-83995:-1:exon
so has part: feature:82326-82496:-1:exon
so has part: feature:80138-80336:-1:exon
so has part: feature:78411-78475:-1:exon
so has part: feature:78197-78312:-1:exon
so has part: feature:76180-76258:-1:exon
so has part: feature:76015-76091:-1:exon
so has part: feature:75805-75924:-1:exon
so has part: feature:75038-75716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83899-83995:-1:exon

position:83899:-1
position: 83899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82326-82496:-1:exon

position:82326:-1
position: 82326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82496:-1
position: 82496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80138-80336:-1:exon

position:80138:-1
position: 80138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80336:-1
position: 80336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78411-78475:-1:exon

position:78411:-1
position: 78411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78475:-1
position: 78475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:78197-78312:-1:exon

position:78197:-1
position: 78197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78312:-1
position: 78312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:76180-76258:-1:exon

position:76180:-1
position: 76180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76258:-1
position: 76258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:76015-76091:-1:exon

position:76015:-1
position: 76015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76091:-1
position: 76091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:75805-75924:-1:exon

position:75805:-1
position: 75805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75924:-1
position: 75924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:75038-75716:-1:exon

position:75716:-1
position: 75716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4D-like
translation: MLLAQGLLLHRLGRDWTWPEAEPEPEPRPLRAGSAPCALRPLLRCFGDHPRAPLGLHRLVALGSGTDGEWFGPGAAAHSLRRAVETWPDSGGLSVYVAQDCTVYRADVAALLRAPTGAVIILVPVRLGGDALNPIYVRGIKELLKLESCLGIIGGKPRHSLYFIGFQDDFLLYLDPHYCQPYVDTEQENFPLQSFQCRSLRKMPFGKMDPSCTIGFYAGAGTGLDALCKDLSRVLAPPTAPERYPLFTLVEGGAQGMEPPPPPETPPPPATPSGAEGFVFL
SIO_010081: LOC117437538
subclass of: SO_0000673
so part of: LOC117437538
location: complement(join(75570..75716,75805..75924,76015..76091,76180..76258,78197..78312,78411..78475,80138..80336,82326..82368))
location: region:75570-82368:-1
so has part: feature:82326-82368:-1:exon
so has part: feature:80138-80336:-1:exon
so has part: feature:78411-78475:-1:exon
so has part: feature:78197-78312:-1:exon
so has part: feature:76180-76258:-1:exon
so has part: feature:76015-76091:-1:exon
so has part: feature:75805-75924:-1:exon
so has part: feature:75570-75716:-1:exon

XP_033927872.1
type: Protein
SIO_000068: ncbiprotein

position:75570:-1
position: 75570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82368:-1
position: 82368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82326-82368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80138-80336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78411-78475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78197-78312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:76180-76258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:76015-76091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:75805-75924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75570-75716:-1:exon

LOC117437568
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 85599..101722
location: region:85599-101722:1
so has part: feature:85599-101722:1:exon
subclass of: SO_0000010

117437568
type: Gene
SIO_000068: ncbigene

position:85599:1
position: 85599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101722:1
position: 101722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85599-101722:1:exon

LOC117437568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437568
product: kelch like ECH associated protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072073.1
SIO_010081: LOC117437568
subclass of: SO_0000673
so part of: LOC117437568
location: join(85599..85645,88888..89512,91924..92609,98097..98302,100328..100504,101542..101722)
location: region:85599-101722:1
so has part: feature:85599-85645:1:exon
so has part: feature:88888-89512:1:exon
so has part: feature:91924-92609:1:exon
so has part: feature:98097-98302:1:exon
so has part: feature:100328-100504:1:exon
so has part: feature:101542-101722:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85599-85645:1:exon

position:85645:1
position: 85645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88888-89512:1:exon

position:88888:1
position: 88888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89512:1
position: 89512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91924-92609:1:exon

position:91924:1
position: 91924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92609:1
position: 92609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:98097-98302:1:exon

position:98097:1
position: 98097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98302:1
position: 98302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100328-100504:1:exon

position:100328:1
position: 100328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100504:1
position: 100504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:101542-101722:1:exon

position:101542:1
position: 101542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like ECH-associated protein 1
translation: MSSPPAPECAAEVTPSPGGGSGSFSYSLAEHPTAALAVMNQLRLDRHLCDVTLSIRYHSDAGDATADIPAHKVVLAASSPVFRAMFTAGLKEQGMEVVPIEGVHPKAMERLVEFAYTASVAVGESCVLQLMNGAVMYQMDRVVRACADFLARQLHPSNAIGIAAFAEHIGCADLHQRAREYIYMHFGEVSKQEEFFNLSHCQLATLISRDELNVRCESEVFHACINWVKHDCPNRRPYVQALLRAVRCHSLTPHFLQTQLQKCEILRGDSRSKDYLAQIFQDLTLHKATRVLPCRAPKVGQLIYAAGGYFRHSLCFLEAFNPRDGSWMRLADLQVPRSGLGGCVVGGLFYAVGGRNNAPDGNTDSAAIDCYNPMTNRWSPCAPMSVPRNRIGVGVIDGMIYAVGGSHGCVHHSSVERYDPERDTWERVAPMQSRRIGVGVAVLNRLLYAVGGFDGCSRLRSAECYHPERDTWRPVAAMATVRSGAGVCALNNCIYAMGGYDGTDQLSSTERYEVETDAWSFVAPMGHRRSALGVTVYQGKIYVLGGYDGHAFLDSVECYDPVTDAWTEVTRMTSGRSGVGVAITMEPCRDQPPPHCPC
SIO_010081: LOC117437568
subclass of: SO_0000673
so part of: LOC117437568
location: join(88949..89512,91924..92609,98097..98302,100328..100504,101542..101705)
location: region:88949-101705:1
so has part: feature:88949-89512:1:exon
so has part: feature:91924-92609:1:exon
so has part: feature:98097-98302:1:exon
so has part: feature:100328-100504:1:exon
so has part: feature:101542-101705:1:exon

XP_033927964.1
type: Protein
SIO_000068: ncbiprotein

position:88949:1
position: 88949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101705:1
position: 101705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88949-89512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91924-92609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98097-98302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100328-100504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101542-101705:1:exon

LOC117437571
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(104189..126053)
location: region:104189-126053:-1
so has part: feature:104189-126053:-1:exon
subclass of: SO_0000010

117437571
type: Gene
SIO_000068: ncbigene

position:104189:-1
position: 104189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126053:-1
position: 126053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104189-126053:-1:exon

LOC117437571
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437571
product: cAMP-specific 3',5'-cyclic phosphodiesterase 4C-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072077.1
SIO_010081: LOC117437571
subclass of: SO_0000673
so part of: LOC117437571
location: complement(join(104189..104585,105628..105810,107177..107299,107770..107924,110294..110393,111335..111499,113178..113276,113354..113541,114105..114198,118533..118645,119651..119700,119797..119870,120355..120391,120562..120732,125782..126053))
location: region:104189-126053:-1
so has part: feature:125782-126053:-1:exon
so has part: feature:120562-120732:-1:exon
so has part: feature:120355-120391:-1:exon
so has part: feature:119797-119870:-1:exon
so has part: feature:119651-119700:-1:exon
so has part: feature:118533-118645:-1:exon
so has part: feature:114105-114198:-1:exon
so has part: feature:113354-113541:-1:exon
so has part: feature:113178-113276:-1:exon
so has part: feature:111335-111499:-1:exon
so has part: feature:110294-110393:-1:exon
so has part: feature:107770-107924:-1:exon
so has part: feature:107177-107299:-1:exon
so has part: feature:105628-105810:-1:exon
so has part: feature:104189-104585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125782-126053:-1:exon

position:125782:-1
position: 125782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120562-120732:-1:exon

position:120562:-1
position: 120562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120732:-1
position: 120732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120355-120391:-1:exon

position:120355:-1
position: 120355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120391:-1
position: 120391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:119797-119870:-1:exon

position:119797:-1
position: 119797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119870:-1
position: 119870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119651-119700:-1:exon

position:119651:-1
position: 119651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119700:-1
position: 119700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:118533-118645:-1:exon

position:118533:-1
position: 118533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118645:-1
position: 118645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:114105-114198:-1:exon

position:114105:-1
position: 114105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114198:-1
position: 114198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:113354-113541:-1:exon

position:113354:-1
position: 113354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113541:-1
position: 113541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:113178-113276:-1:exon

position:113178:-1
position: 113178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113276:-1
position: 113276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:111335-111499:-1:exon

position:111335:-1
position: 111335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111499:-1
position: 111499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:110294-110393:-1:exon

position:110294:-1
position: 110294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110393:-1
position: 110393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:107770-107924:-1:exon

position:107770:-1
position: 107770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107924:-1
position: 107924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:107177-107299:-1:exon

position:107177:-1
position: 107177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107299:-1
position: 107299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:105628-105810:-1:exon

position:105628:-1
position: 105628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105810:-1
position: 105810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:104189-104585:-1:exon

position:104585:-1
position: 104585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437571
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437571
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cAMP-specific 3',5'-cyclic phosphodiesterase 4C-like
translation: MEPVPGSRKSLSLSLPVPREGSSTLRPPQHLWRQPRTPIRIRHRGFSDAERPRPRPMERADAVDTGDRPGLRKSRMSWPSSLHGAPSTGRRLEAENGPPPEAQPPPGLVLVPGGAPGQRRESFLYRSDSDFDGSPKSLSRTSSVTSDVHGEDLIVTPFAQVLASLRSVRSNFSILTNVPPPPGSKRSPIGSQPPPCPPVLSEETSQQLARETLEELDWCLEQLENLQTHRAVSEMASNKFKRMLNRELTHLSEMSRSGNQVSEYISSTFLDKQHEVEIPAPGPKERDKKRRPPPPLGQLRGGGGKQLPPPGGAGGCGVPRFGVSTDREELLGKELESINKWGLNIFRVAEFSNNHSLSCIMFSVFQERDLLRTFRMAPQTLLTFVRTLESRYRPHVAYHNSLHAADVVQSTHVLLATPALDAVFTDLEILAALFAAAIHDVDHPGVSNQFLINTNSELALLYNDESVLENHHLAVGFQLLQEENCDIFQSLSRRQRQSLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDHYTDRIQVLRNMVHCADLSNPTKPLELYRQWTERIMEEFFRQGDRERERGMEISPMCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILETLEENRDWYHSRVPHSPSPPPPPPTPPPLGPPPIPPHFRFDLPLDEDEEGGGHDPTLGPPPCEDEDGEAPPHPPYVPPPKRPPGRPPEGEEEEGPDQGDGGGG
SIO_010081: LOC117437571
subclass of: SO_0000673
so part of: LOC117437571
location: complement(join(104189..104585,105628..105810,107177..107299,107770..107924,110294..110393,111335..111499,113178..113276,113354..113541,114105..114198,118533..118645,119651..119700,119797..119870,120355..120391,120562..120732,125782..126053))
location: region:104189-126053:-1
so has part: feature:125782-126053:-1:exon
so has part: feature:120562-120732:-1:exon
so has part: feature:120355-120391:-1:exon
so has part: feature:119797-119870:-1:exon
so has part: feature:119651-119700:-1:exon
so has part: feature:118533-118645:-1:exon
so has part: feature:114105-114198:-1:exon
so has part: feature:113354-113541:-1:exon
so has part: feature:113178-113276:-1:exon
so has part: feature:111335-111499:-1:exon
so has part: feature:110294-110393:-1:exon
so has part: feature:107770-107924:-1:exon
so has part: feature:107177-107299:-1:exon
so has part: feature:105628-105810:-1:exon
so has part: feature:104189-104585:-1:exon

XP_033927968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125782-126053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120562-120732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120355-120391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119797-119870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119651-119700:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118533-118645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:114105-114198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113354-113541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113178-113276:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:111335-111499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110294-110393:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107770-107924:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107177-107299:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:105628-105810:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:104189-104585:-1:exon

LOC117437558
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 131602..136947
location: region:131602-136947:1
so has part: feature:131602-136947:1:exon
subclass of: SO_0000010

117437558
type: Gene
SIO_000068: ncbigene

position:131602:1
position: 131602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136947:1
position: 136947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131602-136947:1:exon

LOC117437558
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437558
product: cell division cycle 37, HSP90 cochaperone
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072041.1
SIO_010081: LOC117437558
subclass of: SO_0000673
so part of: LOC117437558
location: join(131602..131785,133051..133332,134118..134223,134307..134422,135185..135307,135385..135567,136454..136525,136630..136947)
location: region:131602-136947:1
so has part: feature:131602-131785:1:exon
so has part: feature:133051-133332:1:exon
so has part: feature:134118-134223:1:exon
so has part: feature:134307-134422:1:exon
so has part: feature:135185-135307:1:exon
so has part: feature:135385-135567:1:exon
so has part: feature:136454-136525:1:exon
so has part: feature:136630-136947:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131602-131785:1:exon

position:131785:1
position: 131785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133051-133332:1:exon

position:133051:1
position: 133051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133332:1
position: 133332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134118-134223:1:exon

position:134118:1
position: 134118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134223:1
position: 134223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:134307-134422:1:exon

position:134307:1
position: 134307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134422:1
position: 134422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135185-135307:1:exon

position:135185:1
position: 135185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135307:1
position: 135307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:135385-135567:1:exon

position:135385:1
position: 135385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135567:1
position: 135567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:136454-136525:1:exon

position:136454:1
position: 136454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136525:1
position: 136525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:136630-136947:1:exon

position:136630:1
position: 136630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437558
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hsp90 co-chaperone Cdc37
translation: MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDKGCRECKRKLSECLRKMRELEVSAPDGGKGELEKLQAEAQQLRKEEKSWEKKLEELKKKEKNLPWNVDTLSKDGFSKSVFNVKAEEKEETEEQKEKKHKTFVERHEKQIKHFGMLRRWDDSQKYLSDNPHLVCEETANYLVIWCIDLEVEEKHALMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTKIKTADQQYMEGFNEELEAFKERVRGRAKVRIEKAMKEYEEEERQKRLGPGGLDPVEVYESLPPELQKCFDVKDVQMLQDAISKMDPTEAKHHMQRCIDSGLWVPNAKSGEGAGKGGSEGSEEEGKKENGDEEEGNA
SIO_010081: LOC117437558
subclass of: SO_0000673
so part of: LOC117437558
location: join(131684..131785,133051..133332,134118..134223,134307..134422,135185..135307,135385..135567,136454..136525,136630..136779)
location: region:131684-136779:1
so has part: feature:131684-131785:1:exon
so has part: feature:133051-133332:1:exon
so has part: feature:134118-134223:1:exon
so has part: feature:134307-134422:1:exon
so has part: feature:135185-135307:1:exon
so has part: feature:135385-135567:1:exon
so has part: feature:136454-136525:1:exon
so has part: feature:136630-136779:1:exon

XP_033927932.1
type: Protein
SIO_000068: ncbiprotein

position:131684:1
position: 131684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136779:1
position: 136779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131684-131785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133051-133332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134118-134223:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134307-134422:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135185-135307:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135385-135567:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136454-136525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136630-136779:1:exon

LOC117437572
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(143922..150556)
location: region:143922-150556:-1
so has part: feature:143922-150556:-1:exon
subclass of: SO_0000010

117437572
type: Gene
SIO_000068: ncbigene

position:143922:-1
position: 143922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150556:-1
position: 150556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143922-150556:-1:exon

LOC117437572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437572
product: protein ADP-ribosylarginine hydrolase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072078.1
SIO_010081: LOC117437572
subclass of: SO_0000673
so part of: LOC117437572
location: complement(join(143922..144333,146706..146889,147802..147881,148377..148482,148953..149051,150328..150556))
location: region:143922-150556:-1
so has part: feature:150328-150556:-1:exon
so has part: feature:148953-149051:-1:exon
so has part: feature:148377-148482:-1:exon
so has part: feature:147802-147881:-1:exon
so has part: feature:146706-146889:-1:exon
so has part: feature:143922-144333:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150328-150556:-1:exon

position:150328:-1
position: 150328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148953-149051:-1:exon

position:148953:-1
position: 148953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149051:-1
position: 149051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148377-148482:-1:exon

position:148377:-1
position: 148377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148482:-1
position: 148482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147802-147881:-1:exon

position:147802:-1
position: 147802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147881:-1
position: 147881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:146706-146889:-1:exon

position:146706:-1
position: 146706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146889:-1
position: 146889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:143922-144333:-1:exon

position:144333:-1
position: 144333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ADP-ribosylarginine hydrolase-like
translation: MVLSGVGDALGYRGGRWEYCRSGEQIHAELQDMGGLEAIVLEPPEWPVSDDTILQLATAEGLATGLEGEELLQELARRYVDAMGDMEGRKPGPTSILGTSQLRPGVPGGYRIPFNPTGTGCGAAMRSLSIGLRYPRPQDLPTLLAVSIESGRMTHHHPTGYLGAVAVALFAALGVRGEPPERWGAELLRVLPLAWDYVESTGEAVEENRAEWGFFGEVWGRYLTSRSLLSGSSPPLLPPLRDARSRDAEYARWALGAWPGRSGHDAPLVALDALLAAGGAWAELCARAVLHGGDSDSTGAIAGGLWGLRWGMGAVPEGLRHSLEYGDRLRAAGRGLHRVTWGEGGGAKGVTSQPGVR
SIO_010081: LOC117437572
subclass of: SO_0000673
so part of: LOC117437572
location: complement(join(143922..144333,146706..146889,147802..147881,148377..148482,148953..149051,150328..150520))
location: region:143922-150520:-1
so has part: feature:150328-150520:-1:exon
so has part: feature:148953-149051:-1:exon
so has part: feature:148377-148482:-1:exon
so has part: feature:147802-147881:-1:exon
so has part: feature:146706-146889:-1:exon
so has part: feature:143922-144333:-1:exon

XP_033927969.1
type: Protein
SIO_000068: ncbiprotein

position:150520:-1
position: 150520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150328-150520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148953-149051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148377-148482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147802-147881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:146706-146889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143922-144333:-1:exon

LOC117437569
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(156498..166873)
location: region:156498-166873:-1
so has part: feature:156498-166873:-1:exon
subclass of: SO_0000010

117437569
type: Gene
SIO_000068: ncbigene

position:156498:-1
position: 156498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166873:-1
position: 166873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156498-166873:-1:exon

LOC117437569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437569
product: GIPC PDZ domain containing family member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034072075.1
SIO_010081: LOC117437569
subclass of: SO_0000673
so part of: LOC117437569
location: complement(join(156498..156844,158482..158563,159062..159170,160045..160225,162130..162315,164883..165198,166817..166873))
location: region:156498-166873:-1
so has part: feature:166817-166873:-1:exon
so has part: feature:164883-165198:-1:exon
so has part: feature:162130-162315:-1:exon
so has part: feature:160045-160225:-1:exon
so has part: feature:159062-159170:-1:exon
so has part: feature:158482-158563:-1:exon
so has part: feature:156498-156844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166817-166873:-1:exon

position:166817:-1
position: 166817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164883-165198:-1:exon

position:164883:-1
position: 164883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165198:-1
position: 165198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:162130-162315:-1:exon

position:162130:-1
position: 162130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162315:-1
position: 162315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:160045-160225:-1:exon

position:160045:-1
position: 160045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160225:-1
position: 160225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:159062-159170:-1:exon

position:159062:-1
position: 159062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159170:-1
position: 159170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:158482-158563:-1:exon

position:158482:-1
position: 158482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158563:-1
position: 158563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:156498-156844:-1:exon

position:156844:-1
position: 156844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437569
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: PDZ domain-containing protein GIPC1
translation: MPLGLPRRKKPPPLVDNEEEASGGSSSGVPDASGSGSAVSGSGSAVSGSGSAVSGSGALRPRLVFHTQLAHGSPTGRVEGFGSVRELYGKIAAAFDIPTCEVMFCTLNTHKVDMERLLGGQIGLEDFIFAHTRGRRKRVEVFKAEDALGLTITDNGAGYAFIKRIREGSVISRIPTIGVGDVIEAIDGRSLVGARHFEVAKVLKELPRGRSFAMHLLEPRRAFDMIAPRSGGGXGGGTPMGSGRGTLRLRAHGPPTLEEQPSAFEELAVTKVDDLLESYMGIRDSELAATMVELGRDAADPDALAQALDSQLGDFAFPDEFVFDVWGAIGDAKVGRG
SIO_010081: LOC117437569
subclass of: SO_0000673
so part of: LOC117437569
location: complement(join(156693..156844,158482..158563,159062..159170,160045..160225,162130..162315,164883..165185))
location: region:156693-165185:-1
so has part: feature:164883-165185:-1:exon
so has part: feature:162130-162315:-1:exon
so has part: feature:160045-160225:-1:exon
so has part: feature:159062-159170:-1:exon
so has part: feature:158482-158563:-1:exon
so has part: feature:156693-156844:-1:exon

XP_033927966.1
type: Protein
SIO_000068: ncbiprotein

position:156693:-1
position: 156693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165185:-1
position: 165185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164883-165185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162130-162315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160045-160225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159062-159170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158482-158563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156693-156844:-1:exon

LOC101867607
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101867607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(167974..176416)
location: region:167974-176416:-1
so has part: feature:167974-176416:-1:exon
subclass of: SO_0000010

101867607
type: Gene
SIO_000068: ncbigene

position:167974:-1
position: 167974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176416:-1
position: 176416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167974-176416:-1:exon

LOC101867607
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101867607
product: DnaJ heat shock protein family (Hsp40) member B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072046.1
SIO_010081: LOC101867607
subclass of: SO_0000673
so part of: LOC101867607
location: complement(join(167974..169095,172158..172696,175614..176416))
location: region:167974-176416:-1
so has part: feature:175614-176416:-1:exon
so has part: feature:172158-172696:-1:exon
so has part: feature:167974-169095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175614-176416:-1:exon

position:175614:-1
position: 175614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172158-172696:-1:exon

position:172158:-1
position: 172158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172696:-1
position: 172696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167974-169095:-1:exon

position:169095:-1
position: 169095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101867607
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101867607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily B member 1
translation: MGKDYYRTLGLPRGASAEDVRRAYRRQALRFHPDKNKEPGAEERFKEVAEAYDVLSDPKKREIFDKYGEEGLKGGTPTSGSGGVPNGPTFTYTFRGDPHAMFAEFFDGRNPFDTFFVPRGEDDDDETFTTFHVGFPRGRPPGARRQDPPVLYELRVSLEEVYSGCTKKMKISHKRLNPDGKTVRNEDKILTIEVKRGWKEGTKITFPKEGDQTPTNIPADVVFVLKDKPHGVFRREGSDIVYPAKISLREALCGCTVHTPTLDGRTIPMVFQDILKPGVKRRIPGEGLPLPRAPEQRGDLVIEFDVRFPDRIPAASRSLLEQILPL
SIO_010081: LOC101867607
subclass of: SO_0000673
so part of: LOC101867607
location: complement(join(168865..169095,172158..172696,175614..175824))
location: region:168865-175824:-1
so has part: feature:175614-175824:-1:exon
so has part: feature:172158-172696:-1:exon
so has part: feature:168865-169095:-1:exon

XP_033927937.1
type: Protein
SIO_000068: ncbiprotein

position:168865:-1
position: 168865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175824:-1
position: 175824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175614-175824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172158-172696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168865-169095:-1:exon

LOC117437564
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179743..192266
location: region:179743-192266:1
so has part: feature:179743-192266:1:exon
subclass of: SO_0000010

117437564
type: Gene
SIO_000068: ncbigene

position:179743:1
position: 179743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192266:1
position: 192266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179743-192266:1:exon

LOC117437564
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437564
product: trans-2,3-enoyl-CoA reductase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072062.1
SIO_010081: LOC117437564
subclass of: SO_0000673
so part of: LOC117437564
location: join(179743..179851,182209..182259,183008..183059,183879..183923,184783..184886,186846..186961,187872..187977,188065..188137,188982..189025,189798..189855,190766..190854,191316..191361,192099..192266)
location: region:179743-192266:1
so has part: feature:179743-179851:1:exon
so has part: feature:182209-182259:1:exon
so has part: feature:183008-183059:1:exon
so has part: feature:183879-183923:1:exon
so has part: feature:184783-184886:1:exon
so has part: feature:186846-186961:1:exon
so has part: feature:187872-187977:1:exon
so has part: feature:188065-188137:1:exon
so has part: feature:188982-189025:1:exon
so has part: feature:189798-189855:1:exon
so has part: feature:190766-190854:1:exon
so has part: feature:191316-191361:1:exon
so has part: feature:192099-192266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179743-179851:1:exon

position:179851:1
position: 179851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182209-182259:1:exon

position:182209:1
position: 182209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182259:1
position: 182259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:183008-183059:1:exon

position:183008:1
position: 183008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183059:1
position: 183059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183879-183923:1:exon

position:183879:1
position: 183879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183923:1
position: 183923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:184783-184886:1:exon

position:184783:1
position: 184783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184886:1
position: 184886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:186846-186961:1:exon

position:186846:1
position: 186846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186961:1
position: 186961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:187872-187977:1:exon

position:187872:1
position: 187872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187977:1
position: 187977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:188065-188137:1:exon

position:188065:1
position: 188065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188137:1
position: 188137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:188982-189025:1:exon

position:188982:1
position: 188982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189025:1
position: 189025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:189798-189855:1:exon

position:189798:1
position: 189798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189855:1
position: 189855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:190766-190854:1:exon

position:190766:1
position: 190766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190854:1
position: 190854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:191316-191361:1:exon

position:191316:1
position: 191316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191361:1
position: 191361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:192099-192266:1:exon

position:192099:1
position: 192099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437564
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437564
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very-long-chain enoyl-CoA reductase
translation: MKHYEVEILDARSRQKLCFLDKVEPHATIADIKNLFTKAHPQWYPARQSLRLDPKGRSLKDEDVLQSLPVGTTATFYFRDLGAQISWVTVFLTEYAGPLLIYLLFYFRVPFLYGPRYDFTASRHRVVHLACACHSFHYIKRLLETLFIHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYTPPAYGDDQVKLALAMFLFCQLGNFSIHVALRNLRPAGSKTRKIPYPTRNPFTWLFLLVSCPNYTYEVGSWIGFTIMTQCLPVALFSLVGFVQMAIWAQGKHRSYLREFREYPALRSPIVPFLL
SIO_010081: LOC117437564
subclass of: SO_0000673
so part of: LOC117437564
location: join(179837..179851,182209..182259,183008..183059,183879..183923,184783..184886,186846..186961,187872..187977,188065..188137,188982..189025,189798..189855,190766..190854,191316..191361,192099..192226)
location: region:179837-192226:1
so has part: feature:179837-179851:1:exon
so has part: feature:182209-182259:1:exon
so has part: feature:183008-183059:1:exon
so has part: feature:183879-183923:1:exon
so has part: feature:184783-184886:1:exon
so has part: feature:186846-186961:1:exon
so has part: feature:187872-187977:1:exon
so has part: feature:188065-188137:1:exon
so has part: feature:188982-189025:1:exon
so has part: feature:189798-189855:1:exon
so has part: feature:190766-190854:1:exon
so has part: feature:191316-191361:1:exon
so has part: feature:192099-192226:1:exon

XP_033927953.1
type: Protein
SIO_000068: ncbiprotein

position:179837:1
position: 179837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192226:1
position: 192226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179837-179851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182209-182259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183008-183059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183879-183923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184783-184886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186846-186961:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187872-187977:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188065-188137:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:188982-189025:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:189798-189855:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190766-190854:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:191316-191361:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:192099-192226:1:exon

LOC117437565
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(193453..195231)
location: region:193453-195231:-1
so has part: feature:193453-195231:-1:exon
subclass of: SO_0000010

117437565
type: Gene
SIO_000068: ncbigene

position:193453:-1
position: 193453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195231:-1
position: 195231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193453-195231:-1:exon

LOC117437565
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437565
product: NADH:ubiquinone oxidoreductase subunit B7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072063.1
SIO_010081: LOC117437565
subclass of: SO_0000673
so part of: LOC117437565
location: complement(join(193453..193711,194318..194486,195081..195231))
location: region:193453-195231:-1
so has part: feature:195081-195231:-1:exon
so has part: feature:194318-194486:-1:exon
so has part: feature:193453-193711:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195081-195231:-1:exon

position:195081:-1
position: 195081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194318-194486:-1:exon

position:194318:-1
position: 194318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194486:-1
position: 194486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193453-193711:-1:exon

position:193711:-1
position: 193711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
translation: MGAHLARRYVGGADSEPDPLRMPTFPPDLGLPQRRPRAPPAPPEVLSLARLPLSQRDFCSHHLLALLRCRRETFPEPWSCGELKHQWDSCEHRDYVMRMKEFERERRLLQRQKRRRQREEAAAAAEPA
SIO_010081: LOC117437565
subclass of: SO_0000673
so part of: LOC117437565
location: complement(join(193606..193711,194318..194486,195081..195192))
location: region:193606-195192:-1
so has part: feature:195081-195192:-1:exon
so has part: feature:194318-194486:-1:exon
so has part: feature:193606-193711:-1:exon

XP_033927954.1
type: Protein
SIO_000068: ncbiprotein

position:193606:-1
position: 193606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195192:-1
position: 195192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195081-195192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194318-194486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193606-193711:-1:exon

LOC117437566
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437566
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 201592..203123
location: region:201592-203123:1
so has part: feature:201592-203123:1:exon
subclass of: SO_0000011

117437566
type: Gene
SIO_000068: ncbigene

position:201592:1
position: 201592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203123:1
position: 203123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201592-203123:1:exon

LOC117437566
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437566
product: uncharacterized LOC117437566
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004550472.1
SIO_010081: LOC117437566
subclass of: SO_0000673
so part of: LOC117437566
location: join(201592..201704,201843..201954,202787..202817,203007..203123)
location: region:201592-203123:1
so has part: feature:201592-201704:1:exon
so has part: feature:201843-201954:1:exon
so has part: feature:202787-202817:1:exon
so has part: feature:203007-203123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201592-201704:1:exon

position:201704:1
position: 201704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201843-201954:1:exon

position:201843:1
position: 201843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201954:1
position: 201954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202787-202817:1:exon

position:202787:1
position: 202787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202817:1
position: 202817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:203007-203123:1:exon

position:203007:1
position: 203007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437573
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 204484..206480
location: region:204484-206480:1
so has part: feature:204484-206480:1:exon
subclass of: SO_0000010

117437573
type: Gene
SIO_000068: ncbigene

position:204484:1
position: 204484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206480:1
position: 206480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204484-206480:1:exon

LOC117437573
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437573
product: REC8 meiotic recombination protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072079.1
SIO_010081: LOC117437573
subclass of: SO_0000673
so part of: LOC117437573
location: join(204484..204587,205038..205163,205233..205299,205393..205493,205947..205995,206413..206480)
location: region:204484-206480:1
so has part: feature:204484-204587:1:exon
so has part: feature:205038-205163:1:exon
so has part: feature:205233-205299:1:exon
so has part: feature:205393-205493:1:exon
so has part: feature:205947-205995:1:exon
so has part: feature:206413-206480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204484-204587:1:exon

position:204587:1
position: 204587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205038-205163:1:exon

position:205038:1
position: 205038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205163:1
position: 205163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205233-205299:1:exon

position:205233:1
position: 205233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205299:1
position: 205299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:205393-205493:1:exon

position:205393:1
position: 205393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205493:1
position: 205493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:205947-205995:1:exon

position:205947:1
position: 205947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205995:1
position: 205995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206413-206480:1:exon

position:206413:1
position: 206413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437573
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437573
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiotic recombination protein REC8 homolog
translation: MGQPLPTAPILPAVPPITPPPAPRRRRRRRRLPHSDPEPQLPQAQFQAQLQQPQIHCQPLVLPEPPKRRRWTPKQLLETPTCGWLPPNLWALWNRCRRLPHIEAPPAPPELPSEVEVLREALEPSLPPLPSSEVSLEVSEEEPRPRLLTPEERR
SIO_010081: LOC117437573
subclass of: SO_0000673
so part of: LOC117437573
location: join(204534..204587,205038..205163,205233..205299,205393..205493,205947..205995,206413..206480)
location: region:204534-206480:1
so has part: feature:204534-204587:1:exon
so has part: feature:205038-205163:1:exon
so has part: feature:205233-205299:1:exon
so has part: feature:205393-205493:1:exon
so has part: feature:205947-205995:1:exon
so has part: feature:206413-206480:1:exon

XP_033927970.1
type: Protein
SIO_000068: ncbiprotein

position:204534:1
position: 204534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204534-204587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205038-205163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205233-205299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205393-205493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205947-205995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206413-206480:1:exon

LOC117437561
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 207519..208368
location: region:207519-208368:1
so has part: feature:207519-208368:1:exon
subclass of: SO_0000011

117437561
type: Gene
SIO_000068: ncbigene

position:207519:1
position: 207519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208368:1
position: 208368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207519-208368:1:exon

LOC117437561
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437561
product: uncharacterized LOC117437561
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004550471.1
SIO_010081: LOC117437561
subclass of: SO_0000673
so part of: LOC117437561
location: join(207519..207627,208207..208368)
location: region:207519-208368:1
so has part: feature:207519-207627:1:exon
so has part: feature:208207-208368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:207519-207627:1:exon

position:207627:1
position: 207627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:208207-208368:1:exon

position:208207:1
position: 208207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437542
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(210488..212809)
location: region:210488-212809:-1
so has part: feature:210488-212809:-1:exon
subclass of: SO_0000010

117437542
type: Gene
SIO_000068: ncbigene

position:210488:-1
position: 210488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212809:-1
position: 212809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210488-212809:-1:exon

LOC117437542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437542
product: trafficking protein particle complex 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072005.1
SIO_010081: LOC117437542
subclass of: SO_0000673
so part of: LOC117437542
location: complement(join(210488..211054,212745..212809))
location: region:210488-212809:-1
so has part: feature:212745-212809:-1:exon
so has part: feature:210488-211054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212745-212809:-1:exon

position:212745:-1
position: 212745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:210488-211054:-1:exon

position:211054:-1
position: 211054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 5
translation: MEPRFTRPKAPSLDRPLWGSRSEVPAGAFALLFSELVQYSQRRVRSVAELQARLARLGRHVGPRALEALAARERPGRRDTRLLPALLFVKGPLWRGLFGREAERLEQANDDARTYYVIEREPLVNAFVSVPRHNSSLNCAAFTAGLLEAALAAGGFPARVTAHWHKGTTLMIKFEEGVIARERSLEGR
SIO_010081: LOC117437542
subclass of: SO_0000673
so part of: LOC117437542
location: complement(210488..211054)
location: region:210488-211054:-1
so has part: feature:210488-211054:-1:exon

XP_033927896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210488-211054:-1:exon

LOC117437555
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(217226..219988)
location: region:217226-219988:-1
so has part: feature:217226-219988:-1:exon
subclass of: SO_0000010

117437555
type: Gene
SIO_000068: ncbigene

position:217226:-1
position: 217226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219988:-1
position: 219988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217226-219988:-1:exon

LOC117437555
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437555
product: protein PET100 homolog, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072037.1
SIO_010081: LOC117437555
subclass of: SO_0000673
so part of: LOC117437555
location: complement(join(217226..218080,218466..218498,218777..218863,219934..219988))
location: region:217226-219988:-1
so has part: feature:219934-219988:-1:exon
so has part: feature:218777-218863:-1:exon
so has part: feature:218466-218498:-1:exon
so has part: feature:217226-218080:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219934-219988:-1:exon

position:219934:-1
position: 219934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218777-218863:-1:exon

position:218777:-1
position: 218777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218863:-1
position: 218863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218466-218498:-1:exon

position:218466:-1
position: 218466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218498:-1
position: 218498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:217226-218080:-1:exon

position:218080:-1
position: 218080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein PET100 homolog, mitochondrial
translation: MGVKLEILRMFLYLSFPVGLFWVSNQAEYFQHHVVQRRREIFPPDNPERRKALAALKQRLREGKEP
SIO_010081: LOC117437555
subclass of: SO_0000673
so part of: LOC117437555
location: complement(join(218027..218080,218466..218498,218777..218863,219934..219960))
location: region:218027-219960:-1
so has part: feature:219934-219960:-1:exon
so has part: feature:218777-218863:-1:exon
so has part: feature:218466-218498:-1:exon
so has part: feature:218027-218080:-1:exon

XP_033927928.1
type: Protein
SIO_000068: ncbiprotein

position:218027:-1
position: 218027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219960:-1
position: 219960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219934-219960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218777-218863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218466-218498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218027-218080:-1:exon

LOC115945611
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220276..241025
location: region:220276-241025:1
so has part: feature:220276-241025:1:exon
subclass of: SO_0000010

115945611
type: Gene
SIO_000068: ncbigene

position:220276:1
position: 220276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241025:1
position: 241025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220276-241025:1:exon

LOC115945611
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945611
product: XPA binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034072054.1
SIO_010081: LOC115945611
subclass of: SO_0000673
so part of: LOC115945611
location: join(220276..220381,221814..221962,223356..223479,224094..224291,225690..225824,227151..227315,228860..229004,230029..230180,230835..230954,231637..231768,232602..232733,234540..234653,236112..236274,237230..237420,238393..238515,238939..239110,239967..240093,240385..240479,240933..241025)
location: region:220276-241025:1
so has part: feature:220276-220381:1:exon
so has part: feature:221814-221962:1:exon
so has part: feature:223356-223479:1:exon
so has part: feature:224094-224291:1:exon
so has part: feature:225690-225824:1:exon
so has part: feature:227151-227315:1:exon
so has part: feature:228860-229004:1:exon
so has part: feature:230029-230180:1:exon
so has part: feature:230835-230954:1:exon
so has part: feature:231637-231768:1:exon
so has part: feature:232602-232733:1:exon
so has part: feature:234540-234653:1:exon
so has part: feature:236112-236274:1:exon
so has part: feature:237230-237420:1:exon
so has part: feature:238393-238515:1:exon
so has part: feature:238939-239110:1:exon
so has part: feature:239967-240093:1:exon
so has part: feature:240385-240479:1:exon
so has part: feature:240933-241025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220276-220381:1:exon

position:220381:1
position: 220381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221814-221962:1:exon

position:221814:1
position: 221814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221962:1
position: 221962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223356-223479:1:exon

position:223356:1
position: 223356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223479:1
position: 223479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:224094-224291:1:exon

position:224094:1
position: 224094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224291:1
position: 224291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:225690-225824:1:exon

position:225690:1
position: 225690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225824:1
position: 225824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:227151-227315:1:exon

position:227151:1
position: 227151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227315:1
position: 227315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:228860-229004:1:exon

position:228860:1
position: 228860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229004:1
position: 229004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:230029-230180:1:exon

position:230029:1
position: 230029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230180:1
position: 230180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:230835-230954:1:exon

position:230835:1
position: 230835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230954:1
position: 230954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:231637-231768:1:exon

position:231637:1
position: 231637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231768:1
position: 231768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:232602-232733:1:exon

position:232602:1
position: 232602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232733:1
position: 232733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:234540-234653:1:exon

position:234540:1
position: 234540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234653:1
position: 234653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:236112-236274:1:exon

position:236112:1
position: 236112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236274:1
position: 236274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:237230-237420:1:exon

position:237230:1
position: 237230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237420:1
position: 237420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:238393-238515:1:exon

position:238393:1
position: 238393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238515:1
position: 238515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:238939-239110:1:exon

position:238939:1
position: 238939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239110:1
position: 239110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:239967-240093:1:exon

position:239967:1
position: 239967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240093:1
position: 240093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:240385-240479:1:exon

position:240385:1
position: 240385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240479:1
position: 240479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:240933-241025:1:exon

position:240933:1
position: 240933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115945611
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SYF1
translation: MEAPLERPELSFEDEEVQHEEELLRSPFSVRCWLRYAQSRRKGPRHRLNLLFERGLRQLPGSYKLWYQYLRHRRQQVKGRCPTDPAYEEANACHERALVFMHKMPRIWLDYCQFLVDQGRITRTRRTFDRALRALPITQHHRIWPLYLQFVRLYPLPETAVRVYRRFLKLSPESAEEFIGYLCAAGRLDEAATRLAQLVNDERFVSQHGKSNYQLWQELCALLSQHPERIRSLDVGSIIRGGLTRFTDQRGRLWGALAESCVRSGHFEKARDVYEEAVQTVMTVRDFTQVFDSYAQLEESLIAAQLESAAVRPLEPGEEVELELRLARFERLMSRRPLLLNSVLLRQNPHNVHEWHKRVQLYQGQPEQIIRTYTEAVRTVDPLKAMGQPHSLWVAFARFYEDNGQLEDARTILSKATQVRFRHVEDLAAVWCEFGEMELRHNNYEQALSILRRATALPSRRAEYFDSSEPVQNRLYKSLRLWSMLADLEESLGTFQSTKAVYERILDLRIATPQIIINYGLFLEERGYFEESFKAYERGVSLFRWPALADIWLTYLTKFVARYGGRKLERARDLFEQALDGCPPRHAKTIYLLYAKLEEDFGLARHAMGVYDRATRAVLPAQQPDMYNIYIRRAAELYGVTHTRPIYQRAIEVLGDDAARELCLRFADMESRLGEVDRARAIYIYCSQLCDPRITGPFWQTWKQFELRHGNEDTIREMLRIKRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSGLDEMKLLEQRAELMAAEAQRDTAPPRHKLLFVRGEAPREALAALTQEGNPDEIELGDEEEPEPDEVPLEQKQVPSSVFGGLKDD
SIO_010081: LOC115945611
subclass of: SO_0000673
so part of: LOC115945611
location: join(220346..220381,221814..221962,223356..223479,224094..224291,225690..225824,227151..227315,228860..229004,230029..230180,230835..230954,231637..231768,232602..232733,234540..234653,236112..236274,237230..237420,238393..238515,238939..239110,239967..240093,240385..240479,240933..240994)
location: region:220346-240994:1
so has part: feature:220346-220381:1:exon
so has part: feature:221814-221962:1:exon
so has part: feature:223356-223479:1:exon
so has part: feature:224094-224291:1:exon
so has part: feature:225690-225824:1:exon
so has part: feature:227151-227315:1:exon
so has part: feature:228860-229004:1:exon
so has part: feature:230029-230180:1:exon
so has part: feature:230835-230954:1:exon
so has part: feature:231637-231768:1:exon
so has part: feature:232602-232733:1:exon
so has part: feature:234540-234653:1:exon
so has part: feature:236112-236274:1:exon
so has part: feature:237230-237420:1:exon
so has part: feature:238393-238515:1:exon
so has part: feature:238939-239110:1:exon
so has part: feature:239967-240093:1:exon
so has part: feature:240385-240479:1:exon
so has part: feature:240933-240994:1:exon

XP_033927945.1
type: Protein
SIO_000068: ncbiprotein

position:220346:1
position: 220346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240994:1
position: 240994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220346-220381:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221814-221962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223356-223479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:224094-224291:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:225690-225824:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227151-227315:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228860-229004:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:230029-230180:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:230835-230954:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231637-231768:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:232602-232733:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:234540-234653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:236112-236274:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:237230-237420:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:238393-238515:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:238939-239110:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:239967-240093:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:240385-240479:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:240933-240994:1:exon

LOC117437574
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(242042..268764)
location: region:242042-268764:-1
so has part: feature:242042-268764:-1:exon
subclass of: SO_0000010

117437574
type: Gene
SIO_000068: ncbigene

position:242042:-1
position: 242042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268764:-1
position: 268764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242042-268764:-1:exon

LOC117437574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437574
product: calmodulin regulated spectrin associated protein family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072080.1
SIO_010081: LOC117437574
subclass of: SO_0000673
so part of: LOC117437574
location: complement(join(242042..242930,243029..243860,244851..244969,245575..245663,246550..246634,247293..247528,248693..248835,249511..249726,249778..250532,250653..251224,252063..252138,252786..252859,253869..253908,254024..254117,254775..254914,256377..256515,257981..258028,259707..259739,260699..260797,261630..261764,262803..263035,268513..268764))
location: region:242042-268764:-1
so has part: feature:268513-268764:-1:exon
so has part: feature:262803-263035:-1:exon
so has part: feature:261630-261764:-1:exon
so has part: feature:260699-260797:-1:exon
so has part: feature:259707-259739:-1:exon
so has part: feature:257981-258028:-1:exon
so has part: feature:256377-256515:-1:exon
so has part: feature:254775-254914:-1:exon
so has part: feature:254024-254117:-1:exon
so has part: feature:253869-253908:-1:exon
so has part: feature:252786-252859:-1:exon
so has part: feature:252063-252138:-1:exon
so has part: feature:250653-251224:-1:exon
so has part: feature:249778-250532:-1:exon
so has part: feature:249511-249726:-1:exon
so has part: feature:248693-248835:-1:exon
so has part: feature:247293-247528:-1:exon
so has part: feature:246550-246634:-1:exon
so has part: feature:245575-245663:-1:exon
so has part: feature:244851-244969:-1:exon
so has part: feature:243029-243860:-1:exon
so has part: feature:242042-242930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:268513-268764:-1:exon

position:268513:-1
position: 268513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262803-263035:-1:exon

position:262803:-1
position: 262803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263035:-1
position: 263035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:261630-261764:-1:exon

position:261630:-1
position: 261630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261764:-1
position: 261764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:260699-260797:-1:exon

position:260699:-1
position: 260699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260797:-1
position: 260797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:259707-259739:-1:exon

position:259707:-1
position: 259707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259739:-1
position: 259739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:257981-258028:-1:exon

position:257981:-1
position: 257981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258028:-1
position: 258028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:256377-256515:-1:exon

position:256377:-1
position: 256377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256515:-1
position: 256515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:254775-254914:-1:exon

position:254775:-1
position: 254775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254914:-1
position: 254914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:254024-254117:-1:exon

position:254024:-1
position: 254024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254117:-1
position: 254117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:253869-253908:-1:exon

position:253869:-1
position: 253869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253908:-1
position: 253908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:252786-252859:-1:exon

position:252786:-1
position: 252786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252859:-1
position: 252859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:252063-252138:-1:exon

position:252063:-1
position: 252063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252138:-1
position: 252138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:250653-251224:-1:exon

position:250653:-1
position: 250653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251224:-1
position: 251224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:249778-250532:-1:exon

position:249778:-1
position: 249778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250532:-1
position: 250532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:249511-249726:-1:exon

position:249511:-1
position: 249511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249726:-1
position: 249726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:248693-248835:-1:exon

position:248693:-1
position: 248693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248835:-1
position: 248835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:247293-247528:-1:exon

position:247293:-1
position: 247293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247528:-1
position: 247528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:246550-246634:-1:exon

position:246550:-1
position: 246550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246634:-1
position: 246634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:245575-245663:-1:exon

position:245575:-1
position: 245575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245663:-1
position: 245663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:244851-244969:-1:exon

position:244851:-1
position: 244851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244969:-1
position: 244969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:243029-243860:-1:exon

position:243029:-1
position: 243029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243860:-1
position: 243860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:242042-242930:-1:exon

position:242930:-1
position: 242930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-regulated spectrin-associated protein 3
translation: MVAAPPAAAAAMRRELLGPEIRPLDRYDGNRARTAASIAWAIAASYGGAAQVPPALREPLQRGRLVPAVSRALSAPGLYCRAWAWAMRAPAPPDTAALLELLRHRGDGPVLRERPLQAADLRPPLDIDAHLTLIDSLMGAYVAEATRGLGCPPGAPPGPEGWEQKILCWLDTVNRKLQESTEKEAPPPSDPPSDPPAAPPACTHKCPTRWYWKLVPHAIAFCLKESGNKPPVIRYRRDRAPPRRSPCFPPVLALQDLASGGALAAAIHYYCPQELRLEEVCLKEPMAVADRLHNLRLVRDFSRQHLSSHCPLAVEDLLYMAPALRLNIGAFLAELFLCFEVLRPPFVRPRDLGGGSEAPAAADAASPKSSSPGFAFRHPLLSGGHPPTPLRGTPAPLPHSPSLPHGDSSFSKAWSKKPLSHPLSQAVSFSIPFGLDSDVDIVMGNPVGTALTRSASSDSLALPHSLPHSLPHSPPPAPHSAPNGLPELPTIEEALQIIHSSERLLPEGAPDTFYLHSPRPTVDVGQPHSLLQTHTSSPTASAPGNGRTMTSFAERKKKMEEASGGGHGHGHGVGDGHGVGRGGVGHSVGDGGVGDGHGHSVGVGHGHGVGDGGHSVGDGGVSDGHGPGDGDAHGGVGVGDIRGGVGVAHGVGDGGVGSSPTSPHTQPHTSPPGSPPPSRPTPQPHSDPLSVEMSELGARLEEKRRAIEAQKRRIEAIFSQHRQRLGKAALRRLQAESTPMGAPHSAYEAAVAQLSTAVSSLQLDVLRLNQQQQRLLQEAPPVPVQPAPPAPPAPTAWVIPVAKGNRGAVAPKGVPMGQSRARGPRPTELRRVLSPPQDVDSLPHRRKFSGATVQTRSSIHFSAAPGAPQAGGGTRVSGDGTSDASSPGEGNMGRGNQEEEEEEEELEDGEGDSLEGSPTEGGEKEERERPRFFKVCVSQGAPEPPAQLDLGSQHPLEPLEQNRHRKHWMEPAQEPPGDSGDRPPSPPRSCRRGGGFTRQEQERRQQLRLMEELGRVLRPPRGPPRTPRGVPPAPPQRGTPPHPHRTRDDSALGGGARGLLGQRLSRVYSQSSLSLSTVAEPGGGAKGTSRAVSPSGSPARPREWENESNASSPGPEYSGPRLYKEPSAKSNKHIIHNALSHCCLAGRVNEPQKNRVLQEVERSAATHFLILFRDGGCQFRALYTPCAGDPPVLRRLTGSGPRLVPLPMVQELYKYHSDRKRFSRLPARTMSLSVDAFTIPGHLWQARRGTPRKDNRSYSHGDGNNSPTK
SIO_010081: LOC117437574
subclass of: SO_0000673
so part of: LOC117437574
location: complement(join(243525..243860,244851..244969,245575..245663,246550..246634,247293..247528,248693..248835,249511..249726,249778..250532,250653..251224,252063..252138,252786..252859,253869..253908,254024..254117,254775..254914,256377..256515,257981..258028,259707..259739,260699..260797,261630..261764,262803..263035,268513..268660))
location: region:243525-268660:-1
so has part: feature:268513-268660:-1:exon
so has part: feature:262803-263035:-1:exon
so has part: feature:261630-261764:-1:exon
so has part: feature:260699-260797:-1:exon
so has part: feature:259707-259739:-1:exon
so has part: feature:257981-258028:-1:exon
so has part: feature:256377-256515:-1:exon
so has part: feature:254775-254914:-1:exon
so has part: feature:254024-254117:-1:exon
so has part: feature:253869-253908:-1:exon
so has part: feature:252786-252859:-1:exon
so has part: feature:252063-252138:-1:exon
so has part: feature:250653-251224:-1:exon
so has part: feature:249778-250532:-1:exon
so has part: feature:249511-249726:-1:exon
so has part: feature:248693-248835:-1:exon
so has part: feature:247293-247528:-1:exon
so has part: feature:246550-246634:-1:exon
so has part: feature:245575-245663:-1:exon
so has part: feature:244851-244969:-1:exon
so has part: feature:243525-243860:-1:exon

XP_033927971.1
type: Protein
SIO_000068: ncbiprotein

position:243525:-1
position: 243525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268660:-1
position: 268660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268513-268660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262803-263035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261630-261764:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260699-260797:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259707-259739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257981-258028:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:256377-256515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254775-254914:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:254024-254117:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253869-253908:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252786-252859:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:252063-252138:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:250653-251224:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:249778-250532:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:249511-249726:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:248693-248835:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:247293-247528:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:246550-246634:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:245575-245663:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244851-244969:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:243525-243860:-1:exon

LOC117437541
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(271842..278397)
location: region:271842-278397:-1
so has part: feature:271842-278397:-1:exon
subclass of: SO_0000010

117437541
type: Gene
SIO_000068: ncbigene

position:271842:-1
position: 271842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278397:-1
position: 278397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271842-278397:-1:exon

LOC117437541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437541
product: epoxide hydrolase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034071995.1
SIO_010081: LOC117437541
subclass of: SO_0000673
so part of: LOC117437541
location: complement(join(271842..272332,273516..273664,274773..274876,275708..276027,276848..276933,277072..277326,278349..278397))
location: region:271842-278397:-1
so has part: feature:278349-278397:-1:exon
so has part: feature:277072-277326:-1:exon
so has part: feature:276848-276933:-1:exon
so has part: feature:275708-276027:-1:exon
so has part: feature:274773-274876:-1:exon
so has part: feature:273516-273664:-1:exon
so has part: feature:271842-272332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278349-278397:-1:exon

position:278349:-1
position: 278349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277072-277326:-1:exon

position:277072:-1
position: 277072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277326:-1
position: 277326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276848-276933:-1:exon

position:276848:-1
position: 276848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276933:-1
position: 276933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:275708-276027:-1:exon

position:275708:-1
position: 275708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276027:-1
position: 276027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:274773-274876:-1:exon

position:274773:-1
position: 274773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274876:-1
position: 274876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:273516-273664:-1:exon

position:273516:-1
position: 273516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273664:-1
position: 273664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:271842-272332:-1:exon

position:272332:-1
position: 272332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epoxide hydrolase 3
translation: MLLSLCSLLLAPTRLLLAIWDLAARLGVAVATVAAAVAYGLWGLWVLLRRGPRATFGRRVRDQPPPGLADGTYGEHKYLRLKDSEVVLHYVTRGPATAPLMLLLHGFPQNWFCWRHLLQEFGGRYRVVALDLRGYGASSKPRERQQYRLELLLEDVRQVIEELGAAGRAPGAPPATHKCILVGHDWGGVLAWELAEGHPELVEKLVVMDAPHRAVMAGFTLGHPTQLLRSSFVFLFQLPWLPELLLSLADFELVKLILTGAWTGIQSPGRSLTEQELDAYIYSLAQPGGLSPPLHHYRNLFRGPPIPREPPPIPTLLLWGGHDALLDPRLVPSLRRCLRPSARLCLLPDASHWLPEDQPRALARIIQDFLDGGSLHP
SIO_010081: LOC117437541
subclass of: SO_0000673
so part of: LOC117437541
location: complement(join(272104..272332,273516..273664,274773..274876,275708..276027,276848..276933,277072..277317))
location: region:272104-277317:-1
so has part: feature:277072-277317:-1:exon
so has part: feature:276848-276933:-1:exon
so has part: feature:275708-276027:-1:exon
so has part: feature:274773-274876:-1:exon
so has part: feature:273516-273664:-1:exon
so has part: feature:272104-272332:-1:exon

XP_033927886.1
type: Protein
SIO_000068: ncbiprotein

position:272104:-1
position: 272104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277317:-1
position: 277317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277072-277317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276848-276933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275708-276027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274773-274876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273516-273664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272104-272332:-1:exon

LOC115945589
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(280885..327284)
location: region:280885-327284:-1
so has part: feature:280885-327284:-1:exon
subclass of: SO_0000010

115945589
type: Gene
SIO_000068: ncbigene

position:280885:-1
position: 280885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327284:-1
position: 327284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280885-327284:-1:exon

LOC115945589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945589
product: bromodomain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071945.1
SIO_010081: LOC115945589
subclass of: SO_0000673
so part of: LOC115945589
location: complement(join(280885..281020,282089..282308,283615..283826,284484..284614,284742..284901,285066..285178,286885..287427,288909..289305,289849..289901,296180..296290,297690..297991,299848..300047,301554..301763,303618..303746,304741..305100,306713..306993,309246..309381,311283..311420,312272..312590,313635..313751,315171..315264,326217..326294))
location: region:280885-326294:-1
so has part: feature:326217-326294:-1:exon
so has part: feature:315171-315264:-1:exon
so has part: feature:313635-313751:-1:exon
so has part: feature:312272-312590:-1:exon
so has part: feature:311283-311420:-1:exon
so has part: feature:309246-309381:-1:exon
so has part: feature:306713-306993:-1:exon
so has part: feature:304741-305100:-1:exon
so has part: feature:303618-303746:-1:exon
so has part: feature:301554-301763:-1:exon
so has part: feature:299848-300047:-1:exon
so has part: feature:297690-297991:-1:exon
so has part: feature:296180-296290:-1:exon
so has part: feature:289849-289901:-1:exon
so has part: feature:288909-289305:-1:exon
so has part: feature:286885-287427:-1:exon
so has part: feature:285066-285178:-1:exon
so has part: feature:284742-284901:-1:exon
so has part: feature:284484-284614:-1:exon
so has part: feature:283615-283826:-1:exon
so has part: feature:282089-282308:-1:exon
so has part: feature:280885-281020:-1:exon

position:326294:-1
position: 326294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326217-326294:-1:exon

position:326217:-1
position: 326217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315171-315264:-1:exon

position:315171:-1
position: 315171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315264:-1
position: 315264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:313635-313751:-1:exon

position:313635:-1
position: 313635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313751:-1
position: 313751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:312272-312590:-1:exon

position:312272:-1
position: 312272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312590:-1
position: 312590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:311283-311420:-1:exon

position:311283:-1
position: 311283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311420:-1
position: 311420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:309246-309381:-1:exon

position:309246:-1
position: 309246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309381:-1
position: 309381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:306713-306993:-1:exon

position:306713:-1
position: 306713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306993:-1
position: 306993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:304741-305100:-1:exon

position:304741:-1
position: 304741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305100:-1
position: 305100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:303618-303746:-1:exon

position:303618:-1
position: 303618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303746:-1
position: 303746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:301554-301763:-1:exon

position:301554:-1
position: 301554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301763:-1
position: 301763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:299848-300047:-1:exon

position:299848:-1
position: 299848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300047:-1
position: 300047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:297690-297991:-1:exon

position:297690:-1
position: 297690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297991:-1
position: 297991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:296180-296290:-1:exon

position:296180:-1
position: 296180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296290:-1
position: 296290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:289849-289901:-1:exon

position:289849:-1
position: 289849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289901:-1
position: 289901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:288909-289305:-1:exon

position:288909:-1
position: 288909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289305:-1
position: 289305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:286885-287427:-1:exon

position:286885:-1
position: 286885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287427:-1
position: 287427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:285066-285178:-1:exon

position:285066:-1
position: 285066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285178:-1
position: 285178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:284742-284901:-1:exon

position:284742:-1
position: 284742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284901:-1
position: 284901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:284484-284614:-1:exon

position:284484:-1
position: 284484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284614:-1
position: 284614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:283615-283826:-1:exon

position:283615:-1
position: 283615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283826:-1
position: 283826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:282089-282308:-1:exon

position:282089:-1
position: 282089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282308:-1
position: 282308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:280885-281020:-1:exon

position:281020:-1
position: 281020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115945589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945589
product: bromodomain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071944.1
SIO_010081: LOC115945589
subclass of: SO_0000673
so part of: LOC115945589
location: complement(join(280912..281020,282089..282308,283615..283826,284484..284614,284742..284901,285066..285178,286885..287427,288909..289305,289849..289901,296180..296290,297690..297991,299848..300047,301554..301763,303618..303746,304741..305100,306713..306993,309246..309381,311283..311420,312272..312590,313635..313751,315171..315264,327237..327284))
location: region:280912-327284:-1
so has part: feature:327237-327284:-1:exon
so has part: feature:315171-315264:-1:exon
so has part: feature:313635-313751:-1:exon
so has part: feature:312272-312590:-1:exon
so has part: feature:311283-311420:-1:exon
so has part: feature:309246-309381:-1:exon
so has part: feature:306713-306993:-1:exon
so has part: feature:304741-305100:-1:exon
so has part: feature:303618-303746:-1:exon
so has part: feature:301554-301763:-1:exon
so has part: feature:299848-300047:-1:exon
so has part: feature:297690-297991:-1:exon
so has part: feature:296180-296290:-1:exon
so has part: feature:289849-289901:-1:exon
so has part: feature:288909-289305:-1:exon
so has part: feature:286885-287427:-1:exon
so has part: feature:285066-285178:-1:exon
so has part: feature:284742-284901:-1:exon
so has part: feature:284484-284614:-1:exon
so has part: feature:283615-283826:-1:exon
so has part: feature:282089-282308:-1:exon
so has part: feature:280912-281020:-1:exon

position:280912:-1
position: 280912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327237-327284:-1:exon

position:327237:-1
position: 327237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315171-315264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313635-313751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312272-312590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311283-311420:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309246-309381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306713-306993:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304741-305100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:303618-303746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:301554-301763:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:299848-300047:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:297690-297991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:296180-296290:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:289849-289901:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288909-289305:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:286885-287427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:285066-285178:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:284742-284901:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:284484-284614:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:283615-283826:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:282089-282308:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:280912-281020:-1:exon

LOC115945589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945589
product: bromodomain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071946.1
SIO_010081: LOC115945589
subclass of: SO_0000673
so part of: LOC115945589
location: complement(join(280912..281020,282089..282308,283615..283826,284484..284614,284742..284901,285066..285178,286885..287427,288909..289305,289849..289901,296180..296290,297690..297988,299848..300047,301554..301763,303618..303746,304741..305100,306713..306993,309246..309381,311283..311420,312272..312590,313635..313751,315171..315264,326217..326294))
location: region:280912-326294:-1
so has part: feature:326217-326294:-1:exon
so has part: feature:315171-315264:-1:exon
so has part: feature:313635-313751:-1:exon
so has part: feature:312272-312590:-1:exon
so has part: feature:311283-311420:-1:exon
so has part: feature:309246-309381:-1:exon
so has part: feature:306713-306993:-1:exon
so has part: feature:304741-305100:-1:exon
so has part: feature:303618-303746:-1:exon
so has part: feature:301554-301763:-1:exon
so has part: feature:299848-300047:-1:exon
so has part: feature:297690-297988:-1:exon
so has part: feature:296180-296290:-1:exon
so has part: feature:289849-289901:-1:exon
so has part: feature:288909-289305:-1:exon
so has part: feature:286885-287427:-1:exon
so has part: feature:285066-285178:-1:exon
so has part: feature:284742-284901:-1:exon
so has part: feature:284484-284614:-1:exon
so has part: feature:283615-283826:-1:exon
so has part: feature:282089-282308:-1:exon
so has part: feature:280912-281020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:326217-326294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315171-315264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313635-313751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312272-312590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311283-311420:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309246-309381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306713-306993:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304741-305100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:303618-303746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:301554-301763:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:299848-300047:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:297690-297988:-1:exon

position:297988:-1
position: 297988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:296180-296290:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:289849-289901:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:288909-289305:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:286885-287427:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:285066-285178:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:284742-284901:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:284484-284614:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:283615-283826:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:282089-282308:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:280912-281020:-1:exon

LOC115945589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X2
translation: MAMYPTRVSGEECNGINSMSSESGPGTRLRNLPVMGDGLEATQMSTAQSQAQPQQGNVVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVPNPPQGSSPAQPPVPPQPLQPPVPPAHPFPSVTADLLVQPPVMTMVPPQPPAPAPPAPQAPAPPAPQPMQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHDSSSLPAEPKATKLGPRRESSRPVKPPKKDVPDSQQHLVEKSTKISEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDTKKIKAKEPPSKKAKKSNSNSSTSSKKEPVAVKNSKPPPAYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEESETEMAPKLKKKGHSGREQKKHHHHHHQPVQQQPPPQPQPPPQQPPPPPPPPPQPLPPQPLAPPQQPPPPPPAPPVPPQAPPPPMKSSPPPPFVPAQVPVLEHPLPGTMFDTMTHFTQPILHLPQPEMPPHLPQAPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPPRPPPVSPALSQQPLLPQPPLPQPPQVLLEDEEPPAPHHNLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAAVPQLQHPAPPRPMHMQPMPFPSHLPQGQAPAPPQQPQQQHPAPQAPPPAKPQQVIQHHPSPRHHKPDPYATGHLREAPSPLMMHSPQMPQFQGLVHQSPPQQTIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNPPPPGVQEKERQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERMRREQERMRSREDEDAMEQARRVHEEVRRRQEQQQQQQQQQQAPVVAAPQAQSSQPQASQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: LOC115945589
subclass of: SO_0000673
so part of: LOC115945589
location: complement(join(280952..281020,282089..282308,283615..283826,284484..284614,284742..284901,285066..285178,286885..287427,288909..289305,289849..289901,296180..296290,297690..297988,299848..300047,301554..301763,303618..303746,304741..305100,306713..306993,309246..309381,311283..311420,312272..312590,313635..313654))
location: region:280952-313654:-1
so has part: feature:313635-313654:-1:exon
so has part: feature:312272-312590:-1:exon
so has part: feature:311283-311420:-1:exon
so has part: feature:309246-309381:-1:exon
so has part: feature:306713-306993:-1:exon
so has part: feature:304741-305100:-1:exon
so has part: feature:303618-303746:-1:exon
so has part: feature:301554-301763:-1:exon
so has part: feature:299848-300047:-1:exon
so has part: feature:297690-297988:-1:exon
so has part: feature:296180-296290:-1:exon
so has part: feature:289849-289901:-1:exon
so has part: feature:288909-289305:-1:exon
so has part: feature:286885-287427:-1:exon
so has part: feature:285066-285178:-1:exon
so has part: feature:284742-284901:-1:exon
so has part: feature:284484-284614:-1:exon
so has part: feature:283615-283826:-1:exon
so has part: feature:282089-282308:-1:exon
so has part: feature:280952-281020:-1:exon

XP_033927837.1
type: Protein
SIO_000068: ncbiprotein

position:280952:-1
position: 280952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313654:-1
position: 313654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313635-313654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:312272-312590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311283-311420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309246-309381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306713-306993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304741-305100:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303618-303746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301554-301763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299848-300047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297690-297988:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:296180-296290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289849-289901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288909-289305:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:286885-287427:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:285066-285178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:284742-284901:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:284484-284614:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283615-283826:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:282089-282308:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:280952-281020:-1:exon

LOC115945589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X1
translation: MAMYPTRVSGEECNGINSMSSESGPGTRLRNLPVMGDGLEATQMSTAQSQAQPQQGNVVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVPNPPQGSSPAQPPVPPQPLQPPVPPAHPFPSVTADLLVQPPVMTMVPPQPPAPAPPAPQAPAPPAPQPMQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHDSSSLPAEPKATKLGPRRESSRPVKPPKKDVPDSQQHLVEKSTKISEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDTKKIKAKEPPSKKAKKSNSNSSTSSSKKEPVAVKNSKPPPAYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEESETEMAPKLKKKGHSGREQKKHHHHHHQPVQQQPPPQPQPPPQQPPPPPPPPPQPLPPQPLAPPQQPPPPPPAPPVPPQAPPPPMKSSPPPPFVPAQVPVLEHPLPGTMFDTMTHFTQPILHLPQPEMPPHLPQAPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPPRPPPVSPALSQQPLLPQPPLPQPPQVLLEDEEPPAPHHNLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAAVPQLQHPAPPRPMHMQPMPFPSHLPQGQAPAPPQQPQQQHPAPQAPPPAKPQQVIQHHPSPRHHKPDPYATGHLREAPSPLMMHSPQMPQFQGLVHQSPPQQTIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNPPPPGVQEKERQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERMRREQERMRSREDEDAMEQARRVHEEVRRRQEQQQQQQQQQQAPVVAAPQAQSSQPQASQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: LOC115945589
subclass of: SO_0000673
so part of: LOC115945589
location: complement(join(280952..281020,282089..282308,283615..283826,284484..284614,284742..284901,285066..285178,286885..287427,288909..289305,289849..289901,296180..296290,297690..297991,299848..300047,301554..301763,303618..303746,304741..305100,306713..306993,309246..309381,311283..311420,312272..312590,313635..313654))
location: region:280952-313654:-1
so has part: feature:313635-313654:-1:exon
so has part: feature:312272-312590:-1:exon
so has part: feature:311283-311420:-1:exon
so has part: feature:309246-309381:-1:exon
so has part: feature:306713-306993:-1:exon
so has part: feature:304741-305100:-1:exon
so has part: feature:303618-303746:-1:exon
so has part: feature:301554-301763:-1:exon
so has part: feature:299848-300047:-1:exon
so has part: feature:297690-297991:-1:exon
so has part: feature:296180-296290:-1:exon
so has part: feature:289849-289901:-1:exon
so has part: feature:288909-289305:-1:exon
so has part: feature:286885-287427:-1:exon
so has part: feature:285066-285178:-1:exon
so has part: feature:284742-284901:-1:exon
so has part: feature:284484-284614:-1:exon
so has part: feature:283615-283826:-1:exon
so has part: feature:282089-282308:-1:exon
so has part: feature:280952-281020:-1:exon

XP_033927835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313635-313654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:312272-312590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311283-311420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309246-309381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306713-306993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304741-305100:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303618-303746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301554-301763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299848-300047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297690-297991:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:296180-296290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289849-289901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288909-289305:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:286885-287427:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:285066-285178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:284742-284901:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:284484-284614:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283615-283826:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:282089-282308:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:280952-281020:-1:exon

LOC115945589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 4 isoform X1
translation: MAMYPTRVSGEECNGINSMSSESGPGTRLRNLPVMGDGLEATQMSTAQSQAQPQQGNVVGVNPPPPETSNPNKPKRQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEMTQEETEIVIAQTKGRGRARKEAVTSKPGSSTVPNPPQGSSPAQPPVPPQPLQPPVPPAHPFPSVTADLLVQPPVMTMVPPQPPAPAPPAPQAPAPPAPQPMQPHPPVIPTPAQPVKTKKGVKRKADTTTPTTIDPIHDSSSLPAEPKATKLGPRRESSRPVKPPKKDVPDSQQHLVEKSTKISEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKMPDEPEEPVIPASSPVVVPPPTKVAPPSSSDSSSDSSSDSDSSSDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEELEDTKKIKAKEPPSKKAKKSNSNSSTSSSKKEPVAVKNSKPPPAYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESTSESSSSDSEESETEMAPKLKKKGHSGREQKKHHHHHHQPVQQQPPPQPQPPPQQPPPPPPPPPQPLPPQPLAPPQQPPPPPPAPPVPPQAPPPPMKSSPPPPFVPAQVPVLEHPLPGTMFDTMTHFTQPILHLPQPEMPPHLPQAPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPPRPPPVSPALSQQPLLPQPPLPQPPQVLLEDEEPPAPHHNLPLSTSQMQLYLQQLQKVQPQTPLLPSVKVQSQPQPPLQPPAHPAAVPQLQHPAPPRPMHMQPMPFPSHLPQGQAPAPPQQPQQQHPAPQAPPPAKPQQVIQHHPSPRHHKPDPYATGHLREAPSPLMMHSPQMPQFQGLVHQSPPQQTIQPKKQEMRAASVVQSQPMVVKEEKMHSPVIRNETFSPPLRQDPPKHPESIKPPAHIPQRTEMKPMEGGRPVIRPPEQNPPPPGVQEKERQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFKRAAREKEEREKALKAQAEQVEREKERMRREQERMRSREDEDAMEQARRVHEEVRRRQEQQQQQQQQQQAPVVAAPQAQSSQPQASQSMLDQQREMARKREQERRRREAMAATIDMNFQSDLLAIFEENLF
SIO_010081: LOC115945589
subclass of: SO_0000673
so part of: LOC115945589
location: complement(join(280952..281020,282089..282308,283615..283826,284484..284614,284742..284901,285066..285178,286885..287427,288909..289305,289849..289901,296180..296290,297690..297991,299848..300047,301554..301763,303618..303746,304741..305100,306713..306993,309246..309381,311283..311420,312272..312590,313635..313654))
location: region:280952-313654:-1
so has part: feature:313635-313654:-1:exon
so has part: feature:312272-312590:-1:exon
so has part: feature:311283-311420:-1:exon
so has part: feature:309246-309381:-1:exon
so has part: feature:306713-306993:-1:exon
so has part: feature:304741-305100:-1:exon
so has part: feature:303618-303746:-1:exon
so has part: feature:301554-301763:-1:exon
so has part: feature:299848-300047:-1:exon
so has part: feature:297690-297991:-1:exon
so has part: feature:296180-296290:-1:exon
so has part: feature:289849-289901:-1:exon
so has part: feature:288909-289305:-1:exon
so has part: feature:286885-287427:-1:exon
so has part: feature:285066-285178:-1:exon
so has part: feature:284742-284901:-1:exon
so has part: feature:284484-284614:-1:exon
so has part: feature:283615-283826:-1:exon
so has part: feature:282089-282308:-1:exon
so has part: feature:280952-281020:-1:exon

XP_033927836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313635-313654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:312272-312590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311283-311420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309246-309381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306713-306993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304741-305100:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303618-303746:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301554-301763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299848-300047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297690-297991:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:296180-296290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289849-289901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288909-289305:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:286885-287427:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:285066-285178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:284742-284901:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:284484-284614:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283615-283826:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:282089-282308:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:280952-281020:-1:exon

LOC101874552
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101874552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(328103..343936)
location: region:328103-343936:-1
so has part: feature:328103-343936:-1:exon
subclass of: SO_0000010

101874552
type: Gene
SIO_000068: ncbigene

position:328103:-1
position: 328103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343936:-1
position: 343936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328103-343936:-1:exon

LOC101874552
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101874552
product: A-kinase anchoring protein 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071989.1
SIO_010081: LOC101874552
subclass of: SO_0000673
so part of: LOC101874552
location: complement(join(328103..328880,331708..331803,332532..332662,333453..333546,333933..334074,334745..334841,335536..335580,335748..335892,336281..336875,337734..338016,338971..339003,339579..339617,343859..343936))
location: region:328103-343936:-1
so has part: feature:343859-343936:-1:exon
so has part: feature:339579-339617:-1:exon
so has part: feature:338971-339003:-1:exon
so has part: feature:337734-338016:-1:exon
so has part: feature:336281-336875:-1:exon
so has part: feature:335748-335892:-1:exon
so has part: feature:335536-335580:-1:exon
so has part: feature:334745-334841:-1:exon
so has part: feature:333933-334074:-1:exon
so has part: feature:333453-333546:-1:exon
so has part: feature:332532-332662:-1:exon
so has part: feature:331708-331803:-1:exon
so has part: feature:328103-328880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343859-343936:-1:exon

position:343859:-1
position: 343859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339579-339617:-1:exon

position:339579:-1
position: 339579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339617:-1
position: 339617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:338971-339003:-1:exon

position:338971:-1
position: 338971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339003:-1
position: 339003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:337734-338016:-1:exon

position:337734:-1
position: 337734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338016:-1
position: 338016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:336281-336875:-1:exon

position:336281:-1
position: 336281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336875:-1
position: 336875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:335748-335892:-1:exon

position:335748:-1
position: 335748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335892:-1
position: 335892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:335536-335580:-1:exon

position:335536:-1
position: 335536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335580:-1
position: 335580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:334745-334841:-1:exon

position:334745:-1
position: 334745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334841:-1
position: 334841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:333933-334074:-1:exon

position:333933:-1
position: 333933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334074:-1
position: 334074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:333453-333546:-1:exon

position:333453:-1
position: 333453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333546:-1
position: 333546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:332532-332662:-1:exon

position:332532:-1
position: 332532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332662:-1
position: 332662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:331708-331803:-1:exon

position:331708:-1
position: 331708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331803:-1
position: 331803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:328103-328880:-1:exon

position:328880:-1
position: 328880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101874552
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101874552
product: A-kinase anchoring protein 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071988.1
SIO_010081: LOC101874552
subclass of: SO_0000673
so part of: LOC101874552
location: complement(join(328103..328880,331708..331803,332532..332662,333453..333546,333933..334074,334745..334841,335536..335583,335748..335892,336281..336875,337734..338016,338971..339003,339579..339617,343859..343936))
location: region:328103-343936:-1
so has part: feature:343859-343936:-1:exon
so has part: feature:339579-339617:-1:exon
so has part: feature:338971-339003:-1:exon
so has part: feature:337734-338016:-1:exon
so has part: feature:336281-336875:-1:exon
so has part: feature:335748-335892:-1:exon
so has part: feature:335536-335583:-1:exon
so has part: feature:334745-334841:-1:exon
so has part: feature:333933-334074:-1:exon
so has part: feature:333453-333546:-1:exon
so has part: feature:332532-332662:-1:exon
so has part: feature:331708-331803:-1:exon
so has part: feature:328103-328880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343859-343936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339579-339617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338971-339003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337734-338016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336281-336875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335748-335892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335536-335583:-1:exon

position:335583:-1
position: 335583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:334745-334841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333933-334074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333453-333546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332532-332662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331708-331803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:328103-328880:-1:exon

LOC101874552
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101874552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 8 isoform X2
translation: MEQGYGGYGTWNTGATNTQGTYGTNATSWQGYEGYDYYNTQTTAANTAASYNYAPASSSSWETHKASDLSLNADVGSSMHISSYGTEHSTNENSDSIIAKINQRLDMLSKEGSGGTGDGLEDQESSFRYESFDSYDSRSSMNDRDMYRPGYDYGDVGTDRGDSFGSQFERRDQSRNRGNNYGLMRGRAQNRVQNRGRLNAFNRSDHFMPSSSSERLSARWNELNYMGGRGMGGAGSNRLPSLFSQALVPEYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYDYGMMGMSGMGMGRYGNMPYGMGRQRNRDRMGSVPWHMNTLMPKRRGFRNRSGGRSDGEGGGRKRKQSQSGDEPESKQAKTDSEGDDTDNDEGEGEEKSGDEADKASGDGCEDDDEEMKKKREKQRRRDRMRDRAMDRIQFACSVCKFRSFEEEEIQKHLQSKFHKETLRFIGTKLPDKTVEFLQEYIINRNKKIEKRRQELTEKEGTKQKPDPFKGIGQEHFFKKIEAAHCMACDMLIPAQNHLLQRHLRSADHNRNRRMAAEQFKKTSLHVAKSVLNNKHIVKMLEKYLKGEDPFTDEITDQDVDEAMEGGDGTGEGATEATAGTTTTTTEVSQEGEGGNVEAPEAAEPSQEFSKAEEFLKKLGEQDQPPKPLLMPPFLQDDELEGEEMTAEVTSEAAAAPSEAQEEPQKSVVSPQNETEEWAGKEEEEEEEAAPGSEGEEEEEAPAAATEPQPE
SIO_010081: LOC101874552
subclass of: SO_0000673
so part of: LOC101874552
location: complement(join(328383..328880,331708..331803,332532..332662,333453..333546,333933..334074,334745..334841,335536..335580,335748..335892,336281..336875,337734..338016,338971..339003,339579..339617,343859..343877))
location: region:328383-343877:-1
so has part: feature:343859-343877:-1:exon
so has part: feature:339579-339617:-1:exon
so has part: feature:338971-339003:-1:exon
so has part: feature:337734-338016:-1:exon
so has part: feature:336281-336875:-1:exon
so has part: feature:335748-335892:-1:exon
so has part: feature:335536-335580:-1:exon
so has part: feature:334745-334841:-1:exon
so has part: feature:333933-334074:-1:exon
so has part: feature:333453-333546:-1:exon
so has part: feature:332532-332662:-1:exon
so has part: feature:331708-331803:-1:exon
so has part: feature:328383-328880:-1:exon

XP_033927880.1
type: Protein
SIO_000068: ncbiprotein

position:328383:-1
position: 328383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343877:-1
position: 343877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343859-343877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339579-339617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338971-339003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337734-338016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336281-336875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335748-335892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335536-335580:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:334745-334841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333933-334074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333453-333546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332532-332662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331708-331803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:328383-328880:-1:exon

LOC101874552
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101874552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 8 isoform X1
translation: MEQGYGGYGTWNTGATNTQGTYGTNATSWQGYEGYDYYNTQTTAANTAASYNYAPASSSSWETHKASDLSLNADVGSSMHISSYGTEHSTNENSDSIIAKINQRLDMLSKEGSGGTGDGLEDQESSFRYESFDSYDSRSSMNDRDMYRPGYDYGDVGTDRGDSFGSQFERRDQSRNRGNNYGLMRGRAQNRVQNRGRLNAFNRSDHFMPSSSSERLSARWNELNYMGGRGMGGAGSNRLPSLFSQALVPEYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYDYGMMGMSGMGMGRYGNMPYGMGRQRNRDRMGSVPWHMNTLMPKRRGFRNRSGGRSDGEGGGRKRKQSQSGDEPESKQAKTDSEGDDTDNADEGEGEEKSGDEADKASGDGCEDDDEEMKKKREKQRRRDRMRDRAMDRIQFACSVCKFRSFEEEEIQKHLQSKFHKETLRFIGTKLPDKTVEFLQEYIINRNKKIEKRRQELTEKEGTKQKPDPFKGIGQEHFFKKIEAAHCMACDMLIPAQNHLLQRHLRSADHNRNRRMAAEQFKKTSLHVAKSVLNNKHIVKMLEKYLKGEDPFTDEITDQDVDEAMEGGDGTGEGATEATAGTTTTTTEVSQEGEGGNVEAPEAAEPSQEFSKAEEFLKKLGEQDQPPKPLLMPPFLQDDELEGEEMTAEVTSEAAAAPSEAQEEPQKSVVSPQNETEEWAGKEEEEEEEAAPGSEGEEEEEAPAAATEPQPE
SIO_010081: LOC101874552
subclass of: SO_0000673
so part of: LOC101874552
location: complement(join(328383..328880,331708..331803,332532..332662,333453..333546,333933..334074,334745..334841,335536..335583,335748..335892,336281..336875,337734..338016,338971..339003,339579..339617,343859..343877))
location: region:328383-343877:-1
so has part: feature:343859-343877:-1:exon
so has part: feature:339579-339617:-1:exon
so has part: feature:338971-339003:-1:exon
so has part: feature:337734-338016:-1:exon
so has part: feature:336281-336875:-1:exon
so has part: feature:335748-335892:-1:exon
so has part: feature:335536-335583:-1:exon
so has part: feature:334745-334841:-1:exon
so has part: feature:333933-334074:-1:exon
so has part: feature:333453-333546:-1:exon
so has part: feature:332532-332662:-1:exon
so has part: feature:331708-331803:-1:exon
so has part: feature:328383-328880:-1:exon

XP_033927879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:343859-343877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339579-339617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338971-339003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337734-338016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336281-336875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335748-335892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335536-335583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:334745-334841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333933-334074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333453-333546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332532-332662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331708-331803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:328383-328880:-1:exon

LOC101874552
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC101874552
product: A-kinase anchoring protein 8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550468.1
SIO_010081: LOC101874552
so part of: LOC101874552
location: complement(join(328751..328880,330129..330316,331708..331803,332532..332662,333453..333546,333933..334074,334745..334841,335536..335583,335748..335892,336281..336875,337734..338016,338971..339003,339579..339617,343859..343936))
location: region:328751-343936:-1
so has part: feature:343859-343936:-1:exon
so has part: feature:339579-339617:-1:exon
so has part: feature:338971-339003:-1:exon
so has part: feature:337734-338016:-1:exon
so has part: feature:336281-336875:-1:exon
so has part: feature:335748-335892:-1:exon
so has part: feature:335536-335583:-1:exon
so has part: feature:334745-334841:-1:exon
so has part: feature:333933-334074:-1:exon
so has part: feature:333453-333546:-1:exon
so has part: feature:332532-332662:-1:exon
so has part: feature:331708-331803:-1:exon
so has part: feature:330129-330316:-1:exon
so has part: feature:328751-328880:-1:exon

position:328751:-1
position: 328751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343859-343936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339579-339617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338971-339003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337734-338016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336281-336875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335748-335892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335536-335583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:334745-334841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333933-334074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333453-333546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332532-332662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331708-331803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:330129-330316:-1:exon

position:330129:-1
position: 330129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330316:-1
position: 330316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:328751-328880:-1:exon

LOC101874552
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101874552
product: A-kinase anchoring protein 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071991.1
SIO_010081: LOC101874552
subclass of: SO_0000673
so part of: LOC101874552
location: complement(join(328889..330316,331708..331803,332532..332662,333453..333546,333933..334074,334745..334841,335536..335583,335748..335892,336281..336875,337734..338016,338971..339003,339579..339617,343859..343936))
location: region:328889-343936:-1
so has part: feature:343859-343936:-1:exon
so has part: feature:339579-339617:-1:exon
so has part: feature:338971-339003:-1:exon
so has part: feature:337734-338016:-1:exon
so has part: feature:336281-336875:-1:exon
so has part: feature:335748-335892:-1:exon
so has part: feature:335536-335583:-1:exon
so has part: feature:334745-334841:-1:exon
so has part: feature:333933-334074:-1:exon
so has part: feature:333453-333546:-1:exon
so has part: feature:332532-332662:-1:exon
so has part: feature:331708-331803:-1:exon
so has part: feature:328889-330316:-1:exon

position:328889:-1
position: 328889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343859-343936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339579-339617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338971-339003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337734-338016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336281-336875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335748-335892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335536-335583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:334745-334841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333933-334074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333453-333546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332532-332662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331708-331803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:328889-330316:-1:exon

LOC101874552
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101874552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 8 isoform X4
translation: MEQGYGGYGTWNTGATNTQGTYGTNATSWQGYEGYDYYNTQTTAANTAASYNYAPASSSSWETHKASDLSLNADVGSSMHISSYGTEHSTNENSDSIIAKINQRLDMLSKEGSGGTGDGLEDQESSFRYESFDSYDSRSSMNDRDMYRPGYDYGDVGTDRGDSFGSQFERRDQSRNRGNNYGLMRGRAQNRVQNRGRLNAFNRSDHFMPSSSSERLSARWNELNYMGGRGMGGAGSNRLPSLFSQALVPEYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYDYGMMGMSGMGMGRYGNMPYGMGRQRNRDRMGSVPWHMNTLMPKRRGFRNRSGGRSDGEGGGRKRKQSQSGDEPESKQAKTDSEGDDTDNADEGEGEEKSGDEADKASGDGCEDDDEEMKKKREKQRRRDRMRDRAMDRIQFACSVCKFRSFEEEEIQKHLQSKFHKETLRFIGTKLPDKTVEFLQEYIINRNKKIEKRRQELTEKEGTKQKPDPFKGIGQEHFFKKIEAAHCMACDMLIPAQNHLLQRHLRSADHNRNRRMAAEQFKKTSLHVAKSVLNNKHIVKMLEKYLKGLQARPHLPMGNGIKGCRQI
SIO_010081: LOC101874552
subclass of: SO_0000673
so part of: LOC101874552
location: complement(join(330254..330316,331708..331803,332532..332662,333453..333546,333933..334074,334745..334841,335536..335583,335748..335892,336281..336875,337734..338016,338971..339003,339579..339617,343859..343877))
location: region:330254-343877:-1
so has part: feature:343859-343877:-1:exon
so has part: feature:339579-339617:-1:exon
so has part: feature:338971-339003:-1:exon
so has part: feature:337734-338016:-1:exon
so has part: feature:336281-336875:-1:exon
so has part: feature:335748-335892:-1:exon
so has part: feature:335536-335583:-1:exon
so has part: feature:334745-334841:-1:exon
so has part: feature:333933-334074:-1:exon
so has part: feature:333453-333546:-1:exon
so has part: feature:332532-332662:-1:exon
so has part: feature:331708-331803:-1:exon
so has part: feature:330254-330316:-1:exon

XP_033927882.1
type: Protein
SIO_000068: ncbiprotein

position:330254:-1
position: 330254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343859-343877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339579-339617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338971-339003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337734-338016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336281-336875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335748-335892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335536-335583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:334745-334841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333933-334074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333453-333546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332532-332662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331708-331803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:330254-330316:-1:exon

LOC101874552
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101874552
product: A-kinase anchoring protein 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034071990.1
SIO_010081: LOC101874552
subclass of: SO_0000673
so part of: LOC101874552
location: complement(join(330325..331553,331708..331803,332532..332662,333453..333546,333933..334074,334745..334841,335536..335583,335748..335892,336281..336875,337734..338016,338971..339003,339579..339617,343859..343936))
location: region:330325-343936:-1
so has part: feature:343859-343936:-1:exon
so has part: feature:339579-339617:-1:exon
so has part: feature:338971-339003:-1:exon
so has part: feature:337734-338016:-1:exon
so has part: feature:336281-336875:-1:exon
so has part: feature:335748-335892:-1:exon
so has part: feature:335536-335583:-1:exon
so has part: feature:334745-334841:-1:exon
so has part: feature:333933-334074:-1:exon
so has part: feature:333453-333546:-1:exon
so has part: feature:332532-332662:-1:exon
so has part: feature:331708-331803:-1:exon
so has part: feature:330325-331553:-1:exon

position:330325:-1
position: 330325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343859-343936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339579-339617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338971-339003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337734-338016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336281-336875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335748-335892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335536-335583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:334745-334841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333933-334074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333453-333546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332532-332662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331708-331803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:330325-331553:-1:exon

position:331553:-1
position: 331553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101874552
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101874552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 8 isoform X3
translation: MEQGYGGYGTWNTGATNTQGTYGTNATSWQGYEGYDYYNTQTTAANTAASYNYAPASSSSWETHKASDLSLNADVGSSMHISSYGTEHSTNENSDSIIAKINQRLDMLSKEGSGGTGDGLEDQESSFRYESFDSYDSRSSMNDRDMYRPGYDYGDVGTDRGDSFGSQFERRDQSRNRGNNYGLMRGRAQNRVQNRGRLNAFNRSDHFMPSSSSERLSARWNELNYMGGRGMGGAGSNRLPSLFSQALVPEYGDYGDYGDYGDYGDYGDYGDYGDYGDYGDYDYGMMGMSGMGMGRYGNMPYGMGRQRNRDRMGSVPWHMNTLMPKRRGFRNRSGGRSDGEGGGRKRKQSQSGDEPESKQAKTDSEGDDTDNADEGEGEEKSGDEADKASGDGCEDDDEEMKKKREKQRRRDRMRDRAMDRIQFACSVCKFRSFEEEEIQKHLQSKFHKETLRFIGTKLPDKTVEFLQEYIINRNKKIEKRRQELTEKEGTKQKPDPFKGIGQEHFFKKIEAAHCMACDMLIPAQNHLLQRHLRSADHNRNRRMAAEQFKKTSLHVAKSVLNNKHIVKMLEKYLKVLLTLLVLVWFALCSCIEPADVPSSIPSLSPESIQTETVIKETKVAKGIPLPPKPPLELGPLKGGGHTPGSPPPPPVSVRVGKPPLDSRWD
SIO_010081: LOC101874552
subclass of: SO_0000673
so part of: LOC101874552
location: complement(join(331278..331553,331708..331803,332532..332662,333453..333546,333933..334074,334745..334841,335536..335583,335748..335892,336281..336875,337734..338016,338971..339003,339579..339617,343859..343877))
location: region:331278-343877:-1
so has part: feature:343859-343877:-1:exon
so has part: feature:339579-339617:-1:exon
so has part: feature:338971-339003:-1:exon
so has part: feature:337734-338016:-1:exon
so has part: feature:336281-336875:-1:exon
so has part: feature:335748-335892:-1:exon
so has part: feature:335536-335583:-1:exon
so has part: feature:334745-334841:-1:exon
so has part: feature:333933-334074:-1:exon
so has part: feature:333453-333546:-1:exon
so has part: feature:332532-332662:-1:exon
so has part: feature:331708-331803:-1:exon
so has part: feature:331278-331553:-1:exon

XP_033927881.1
type: Protein
SIO_000068: ncbiprotein

position:331278:-1
position: 331278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343859-343877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339579-339617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338971-339003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337734-338016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336281-336875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335748-335892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335536-335583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:334745-334841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333933-334074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333453-333546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332532-332662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:331708-331803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:331278-331553:-1:exon

LOC106023313
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC106023313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(345886..355004)
location: region:345886-355004:-1
so has part: feature:345886-355004:-1:exon
subclass of: SO_0000010

106023313
type: Gene
SIO_000068: ncbigene

position:345886:-1
position: 345886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355004:-1
position: 355004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345886-355004:-1:exon

LOC106023313
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC106023313
product: A-kinase anchoring protein 8 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072069.1
SIO_010081: LOC106023313
subclass of: SO_0000673
so part of: LOC106023313
location: complement(join(345886..346673,346773..346868,347208..347338,347857..347962,348135..348276,349006..349114,349988..350024,350405..350460,351061..351169,351672..352122,353468..353699,354115..354147,354936..355004))
location: region:345886-355004:-1
so has part: feature:354936-355004:-1:exon
so has part: feature:354115-354147:-1:exon
so has part: feature:353468-353699:-1:exon
so has part: feature:351672-352122:-1:exon
so has part: feature:351061-351169:-1:exon
so has part: feature:350405-350460:-1:exon
so has part: feature:349988-350024:-1:exon
so has part: feature:349006-349114:-1:exon
so has part: feature:348135-348276:-1:exon
so has part: feature:347857-347962:-1:exon
so has part: feature:347208-347338:-1:exon
so has part: feature:346773-346868:-1:exon
so has part: feature:345886-346673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354936-355004:-1:exon

position:354936:-1
position: 354936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354115-354147:-1:exon

position:354115:-1
position: 354115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354147:-1
position: 354147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353468-353699:-1:exon

position:353468:-1
position: 353468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353699:-1
position: 353699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:351672-352122:-1:exon

position:351672:-1
position: 351672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352122:-1
position: 352122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:351061-351169:-1:exon

position:351061:-1
position: 351061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351169:-1
position: 351169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:350405-350460:-1:exon

position:350405:-1
position: 350405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350460:-1
position: 350460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:349988-350024:-1:exon

position:349988:-1
position: 349988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350024:-1
position: 350024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:349006-349114:-1:exon

position:349006:-1
position: 349006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349114:-1
position: 349114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:348135-348276:-1:exon

position:348135:-1
position: 348135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348276:-1
position: 348276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:347857-347962:-1:exon

position:347857:-1
position: 347857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347962:-1
position: 347962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:347208-347338:-1:exon

position:347208:-1
position: 347208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347338:-1
position: 347338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:346773-346868:-1:exon

position:346773:-1
position: 346773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346868:-1
position: 346868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:345886-346673:-1:exon

position:346673:-1
position: 346673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106023313
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC106023313
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 8-like
translation: MSYCGYGDWNSGTNRGYEGYSYSYGYNQDNSGNYGYGMTTSNSWEVPTSDVDGNPDGSSGAEGAMGKVNQRLDMVSHMDTDVMQGAPYGSGDRFNSYNSYDSRPPMAERDIFHPGYDYIEAEPDTNGTYEGPYDAFYGNHRDQFQGRAREDFGQRGQSWGRDNLRPLGSTYPGRMSGQWNEAPQAMGSCAPHGSSRLPSLWSHNVIPEPGMFQGMRSFHGSYGAGMMKQHMRRSWKMWDLDYKPQRKKLRKDPSMRKQKLLNSSDDPKTDGSENSDSDNEEGTEGESGEKEEKEGSRGEGEEEEGKDVDKGALTIQEEIIRIKRRLQAGKRTPERQKKKHRDRMVERIQFVCSLCKYRTFYDDEMSSHLESKFHKEHFKFVGTKLPQQTAEFLQEYVANKTRKTEERRKAIEDINAVIQQIYRDQDLTQAVGMEHFIKKVEAAHCAACDLFIPMQYSIIQKHLKSLDHNYNRRAMMEQSKKSSLVVARSILNNKLISKKLERYLKGENPFMDDPEEKEEHEEGDGGASGNVEEGAAENRDEEENPEEENKEAKGNLEAEGAGNGGEQEETGTETMEAQAEMESAAGNVEEQNSLHPDESLPEEEEHQRVGDEQGSEEVAAAQEEEEDGD
SIO_010081: LOC106023313
subclass of: SO_0000673
so part of: LOC106023313
location: complement(join(346299..346673,346773..346868,347208..347338,347857..347962,348135..348276,349006..349114,349988..350024,350405..350460,351061..351169,351672..352122,353468..353699,354115..354147,354936..354948))
location: region:346299-354948:-1
so has part: feature:354936-354948:-1:exon
so has part: feature:354115-354147:-1:exon
so has part: feature:353468-353699:-1:exon
so has part: feature:351672-352122:-1:exon
so has part: feature:351061-351169:-1:exon
so has part: feature:350405-350460:-1:exon
so has part: feature:349988-350024:-1:exon
so has part: feature:349006-349114:-1:exon
so has part: feature:348135-348276:-1:exon
so has part: feature:347857-347962:-1:exon
so has part: feature:347208-347338:-1:exon
so has part: feature:346773-346868:-1:exon
so has part: feature:346299-346673:-1:exon

XP_033927960.1
type: Protein
SIO_000068: ncbiprotein

position:346299:-1
position: 346299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354948:-1
position: 354948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354936-354948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354115-354147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353468-353699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351672-352122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351061-351169:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350405-350460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349988-350024:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349006-349114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:348135-348276:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:347857-347962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347208-347338:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:346773-346868:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:346299-346673:-1:exon

LOC101874835
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101874835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(356276..400100)
location: region:356276-400100:-1
so has part: feature:356276-400100:-1:exon
subclass of: SO_0000010

101874835
type: Gene
SIO_000068: ncbigene

position:356276:-1
position: 356276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400100:-1
position: 400100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356276-400100:-1:exon

LOC101874835
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101874835
product: WIZ zinc finger, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071935.1
SIO_010081: LOC101874835
subclass of: SO_0000673
so part of: LOC101874835
location: complement(join(356276..357436,358630..358822,359940..360392,362640..363173,363954..364481,365585..366082,367931..368095,376298..376663,376841..379275,381839..381899,394309..394763,399975..400100))
location: region:356276-400100:-1
so has part: feature:399975-400100:-1:exon
so has part: feature:394309-394763:-1:exon
so has part: feature:381839-381899:-1:exon
so has part: feature:376841-379275:-1:exon
so has part: feature:376298-376663:-1:exon
so has part: feature:367931-368095:-1:exon
so has part: feature:365585-366082:-1:exon
so has part: feature:363954-364481:-1:exon
so has part: feature:362640-363173:-1:exon
so has part: feature:359940-360392:-1:exon
so has part: feature:358630-358822:-1:exon
so has part: feature:356276-357436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399975-400100:-1:exon

position:399975:-1
position: 399975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394309-394763:-1:exon

position:394309:-1
position: 394309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394763:-1
position: 394763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:381839-381899:-1:exon

position:381839:-1
position: 381839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381899:-1
position: 381899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:376841-379275:-1:exon

position:376841:-1
position: 376841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379275:-1
position: 379275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:376298-376663:-1:exon

position:376298:-1
position: 376298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376663:-1
position: 376663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:367931-368095:-1:exon

position:367931:-1
position: 367931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368095:-1
position: 368095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:365585-366082:-1:exon

position:365585:-1
position: 365585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366082:-1
position: 366082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:363954-364481:-1:exon

position:363954:-1
position: 363954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364481:-1
position: 364481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:362640-363173:-1:exon

position:362640:-1
position: 362640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363173:-1
position: 363173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:359940-360392:-1:exon

position:359940:-1
position: 359940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360392:-1
position: 360392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:358630-358822:-1:exon

position:358630:-1
position: 358630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358822:-1
position: 358822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:356276-357436:-1:exon

position:357436:-1
position: 357436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101874835
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101874835
product: WIZ zinc finger, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071936.1
SIO_010081: LOC101874835
subclass of: SO_0000673
so part of: LOC101874835
location: complement(join(356276..357436,358630..358822,359940..360392,362640..363173,363954..364083,364180..364481,365585..366082,367931..368095,376298..376663,376838..379275,381839..381899,394309..394763,399975..400100))
location: region:356276-400100:-1
so has part: feature:399975-400100:-1:exon
so has part: feature:394309-394763:-1:exon
so has part: feature:381839-381899:-1:exon
so has part: feature:376838-379275:-1:exon
so has part: feature:376298-376663:-1:exon
so has part: feature:367931-368095:-1:exon
so has part: feature:365585-366082:-1:exon
so has part: feature:364180-364481:-1:exon
so has part: feature:363954-364083:-1:exon
so has part: feature:362640-363173:-1:exon
so has part: feature:359940-360392:-1:exon
so has part: feature:358630-358822:-1:exon
so has part: feature:356276-357436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399975-400100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394309-394763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381839-381899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376838-379275:-1:exon

position:376838:-1
position: 376838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:376298-376663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:367931-368095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:365585-366082:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:364180-364481:-1:exon

position:364180:-1
position: 364180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:363954-364083:-1:exon

position:364083:-1
position: 364083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:362640-363173:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:359940-360392:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:358630-358822:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:356276-357436:-1:exon

LOC101874835
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101874835
product: WIZ zinc finger, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071934.1
SIO_010081: LOC101874835
subclass of: SO_0000673
so part of: LOC101874835
location: complement(join(356276..357436,358630..358822,359940..360392,362640..363173,363954..364481,365585..366082,367931..368095,376298..376663,376838..379275,381839..381899,394309..394763,399975..400100))
location: region:356276-400100:-1
so has part: feature:399975-400100:-1:exon
so has part: feature:394309-394763:-1:exon
so has part: feature:381839-381899:-1:exon
so has part: feature:376838-379275:-1:exon
so has part: feature:376298-376663:-1:exon
so has part: feature:367931-368095:-1:exon
so has part: feature:365585-366082:-1:exon
so has part: feature:363954-364481:-1:exon
so has part: feature:362640-363173:-1:exon
so has part: feature:359940-360392:-1:exon
so has part: feature:358630-358822:-1:exon
so has part: feature:356276-357436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399975-400100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394309-394763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381839-381899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376838-379275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376298-376663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:367931-368095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:365585-366082:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:363954-364481:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:362640-363173:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:359940-360392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:358630-358822:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:356276-357436:-1:exon

LOC101874835
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101874835
product: WIZ zinc finger, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071937.1
SIO_010081: LOC101874835
subclass of: SO_0000673
so part of: LOC101874835
location: complement(join(356276..357436,358630..358822,359940..360392,362640..363173,363954..364481,365585..366082,367931..368095,369865..369997))
location: region:356276-369997:-1
so has part: feature:369865-369997:-1:exon
so has part: feature:367931-368095:-1:exon
so has part: feature:365585-366082:-1:exon
so has part: feature:363954-364481:-1:exon
so has part: feature:362640-363173:-1:exon
so has part: feature:359940-360392:-1:exon
so has part: feature:358630-358822:-1:exon
so has part: feature:356276-357436:-1:exon

position:369997:-1
position: 369997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369865-369997:-1:exon

position:369865:-1
position: 369865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367931-368095:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365585-366082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363954-364481:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362640-363173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:359940-360392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:358630-358822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356276-357436:-1:exon

LOC101874835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101874835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wiz isoform X2
translation: MERAVPSFSGCQGDGGRALLMPPEPGHEQYPPLEGPQGEEPRAAFLQDPKKPLDNPRSSVGTEAELEEDAFYAEDDLEAVSREGKGPSSVELCPLQEEPDFFSSLARQEPDVALEAEDVADEPDPALSGAVPAAAHRTELGSTNEEHLEFKKALYRADARSSLELRSMAWDTSPLESRAGDGREESTLKRLSGLKDLKDSRCGKEGPFAMEPQVDPESDSEELGAGKGAAGPPSPCAGASLGGGEDKYLKTEPKQLEGLGKEHLEKSKRGIQRVDWTSRPTRSPSPHYKELGKVTDVASNLPYRGQAVREVPPPLFRKTLNPVLSKAKALESSSHRKGLLVESDLGEINPLNAAEWTIPKLSAELAVGKQTWTVNAEDSVERMPLMPLDPAPCSSYDIEMRPYVCSVLVEEQGKEELGPEEDPTVYTCIECSIYFKKKEHLMDHMLQHNRGPARDQDRDALGQCQFCCNECGWAFGDPASLEQHKRLHQESREKIIEEIQKLNECPDEGRDARLQCPKCVFGTNSSKIFVQHAKMHVKERKDQGAKKLNLFGSTSSGEIQDSPIYKPFKPNEHVALQMQVPPQSSSKGLSTCVLCSFPAPNDTILKEHMKYAHSHLSWDTEGYEDDPNQPGTSRDAYSPSRPARFADTDYFGKAEQLYPPASQESTSHYEAVPSFTLTHPRHKSNGAGKKDYQASGFHARKAAPYGAPHKTSGLSGFPSAKAYSHFALQQLKRKGGAQALEEGDALRGHPMGLEELRHKWLLGSDAVSMEEEISGSTEMELGENRGTRALSIPQAALDLKRTFRDTLKATDPSLASEEQQQQLRMMVPIVLLEELNLHPKATKRPRGKPYKKKALLPSRDFLMEEPLPLDMLLLDPPLELDDLLDSDSPMLKNEERKCPYCPDRFHNGIGLANHVRGHLNRVGVSYNVRHFISAEEVKAIEQKFSFQKKKKKVANFDPSTFSLMRCEFCGAGFDTRAGLSSHARAHLRDFGITNWELTISPINILKELLANSSEHPMLQAAMAAEPSSPSRERDAHGFGPRKSMTPMSECSIPRSPLSPFPTSWGDESLQSYRDVLAPEEEELVAMEVASPPLPKKSLPSGQLDPPPSRIGTKVSPEPPGSKAEPQDPKTQSLTTCEVCGACFETRKGLSSHARSHLRQLGVAESESSGAPIDLLYELMKQKGKPDGSPIAAPLGKKPPKEPGTAAPRPSLLALAKGGERPTDGPVNKAIKSPPGFSKSLSQPGSPILKKVPGALSGSPSPKNPEEKSSKLSLSPLQSSPSAQWPQAEEEGPLNLTSGAEPVRDIRCEFCGEYFENRKGLSSHARSHLRQMGVTEWYVNGSPIDTLREILKRRSQPRSSSNPVPGHKAMAKSLLSTMGSLEARGPGDFHLQTLPKKVQAGSPMGQSPTSSPPPTARKMFPGLSPPSLQKKLKQDQLRLEIKREMMSGGLHGEAHPSDPAWPPREDMSPLNLSSRAEPVRDIRCEFCGEYFENRKGLSSHARSHLRQMGVTEWSVNGSPIDTLREILKKKTKPCVVKKEPHPSSIEPPKGLTEEGLEPKSPGKILQGMTLAPLGGRSGKPGPGSSGLSRDLALAPMGTKGQGGFLTPLAAKRPLQDERLGPHPADVKHKGFIQTELPFKAKAVHEKPAHTSGEACCELCGLYFENRKALASHARAHLRQFGVTEWCVNGSPIETLSEWIRHRPQKAGAYRSYIQGGRPFTKKFRSHGRDHHHHHHHNGGARRVPLGMQAGAMAFLSKGLAGELAHGEAGKMLDGGGAGDRPMVTSPLSLVKLEEHQRSNISKFERRQARPLDAPIHRPEDGAEFQQKLEETRQPPPRVRPVPSLVPRPPQTSLVKFVGNIYTLKCRFCEVEFQGPLSIQEEWVRHLQRHILEMNFSKVDPIRGEAPPQPEPPAMAEAQ
SIO_010081: LOC101874835
subclass of: SO_0000673
so part of: LOC101874835
location: complement(join(357277..357436,358630..358822,359940..360392,362640..363173,363954..364481,365585..366082,367931..368095,376298..376663,376841..379275,381839..381899,394309..394669))
location: region:357277-394669:-1
so has part: feature:394309-394669:-1:exon
so has part: feature:381839-381899:-1:exon
so has part: feature:376841-379275:-1:exon
so has part: feature:376298-376663:-1:exon
so has part: feature:367931-368095:-1:exon
so has part: feature:365585-366082:-1:exon
so has part: feature:363954-364481:-1:exon
so has part: feature:362640-363173:-1:exon
so has part: feature:359940-360392:-1:exon
so has part: feature:358630-358822:-1:exon
so has part: feature:357277-357436:-1:exon

XP_033927826.1
type: Protein
SIO_000068: ncbiprotein

position:357277:-1
position: 357277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394669:-1
position: 394669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394309-394669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381839-381899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376841-379275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376298-376663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367931-368095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365585-366082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363954-364481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:362640-363173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359940-360392:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358630-358822:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:357277-357436:-1:exon

LOC101874835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101874835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wiz isoform X3
translation: MERAVPSFSGCQGDGGRALLMPPEPGHEQYPPLEGPQGEEPRAAFLQDPKKPLDNPRSSVGTEAELEEDAFYAEDDLEAVSREGKGPSSVELCPLQEEPDFFSSLARQEPDVALEAEDVADEPDPALSGAVPAAAHRTELGSTNEEHLEFKKALYRADARSSLELRSMAWDTSPLESRAGDGREESTLKRLSGLKDLKDSRCGKEGPFAMEPQVDPESDSEELGAGKGAAGPPSPCAGASLGGGEDKYLKTEPKQLEGLGKEHLEKSKRGIQRVDWTSRPTRSPSPHYKELGKVTDVASNLPYRGQAVREVPPPLFRKTLNPVLSKAKALESSSHRKGLLVESDLGEINPLNAAEWTIPKLSAELAVGKQTWTVNAEDSVERMPLMPLDPAPCSSYDIEMRPYVCSVLVEEQGKEELGPEEDPTVYTCIECSIYFKKKEHLMDHMLQHNRGPARDQDRDALGQCQFCCNECGWAFGDPASLEQHKRLHQESREKIIEEIQKLNECPDEGRDARLQCPKCVFGTNSSKIFVQHAKMHVKERKDQGAKKLNLFGSTSSGEIQDSPIYKPFKPNEHVALQMQVPPQSSSKGLSTCVLCSFPAPNDTILKEHMKYAHSHLSWDTEGYEDDPNQPGTSRDAYSPSRPARFADTDYFGKAEQLYPPASQESTSHYEAVPSFTLTHPRHKSNGAGKKDYQASGFHARKAAPYGAPHKTSGLSGFPSAKAYSHFALQQLKRKGGAQALEEGDALRGHPMGLEELRHKWLLGSDAVSMEEEISGSTEMELGENRGTRALSIPQAALDLKRTFRDTLKATDPSLASEEQQQQLRMMVPIVLLEELNLHPKATKRPRGKPYKKKALLPSRDFLMEEPLPLDMLLLDPPLELDDLLDSDSPMLKNEERKCPYCPDRFHNGIGLANHVRGHLNRVGVSYNVRHFISAEEVKAIEQKFSFQKKKKKGIANFDPSTFSLMRCEFCGAGFDTRAGLSSHARAHLRDFGITNWELTISPINILKELLANSSEHPMLQAAMAAEPSSPSRERDAHGFGPRKSMTPMSECSIPRSPLSPFPTSWGDESLQSYRDVLAPEEEELVAMEVASPPLPKKSLPSGQLDPPPSRIGTKVSPEPPGSKAEPQDPKTQSLTTCEVCGACFETRKGLSSHARSHLRQLGVAESESSGAPIDLLYELMKQKGKPDGSPIAAPLGKKPPKEPGTAAPRPSLLALAKGGERPTDGPVNKAIKSPPGFSKSLSQPGSPILKKVPGALSGSPSPKNPEEKSSKLSLSPLQSSPSAQWPQAEEEGPLNLTSGAEPVRDIRCEFCGEYFENRKGLSSHARSHLRQMGVTEWYVNGSPIDTLREILKRRSQPRSSSNPVPGHKAMAKSLLSTMGSLEARGPGDFHLQTLPKKKKLKQDQLRLEIKREMMSGGLHGEAHPSDPAWPPREDMSPLNLSSRAEPVRDIRCEFCGEYFENRKGLSSHARSHLRQMGVTEWSVNGSPIDTLREILKKKTKPCVVKKEPHPSSIEPPKGLTEEGLEPKSPGKILQGMTLAPLGGRSGKPGPGSSGLSRDLALAPMGTKGQGGFLTPLAAKRPLQDERLGPHPADVKHKGFIQTELPFKAKAVHEKPAHTSGEACCELCGLYFENRKALASHARAHLRQFGVTEWCVNGSPIETLSEWIRHRPQKAGAYRSYIQGGRPFTKKFRSHGRDHHHHHHHNGGARRVPLGMQAGAMAFLSKGLAGELAHGEAGKMLDGGGAGDRPMVTSPLSLVKLEEHQRSNISKFERRQARPLDAPIHRPEDGAEFQQKLEETRQPPPRVRPVPSLVPRPPQTSLVKFVGNIYTLKCRFCEVEFQGPLSIQEEWVRHLQRHILEMNFSKVDPIRGEAPPQPEPPAMAEAQ
SIO_010081: LOC101874835
subclass of: SO_0000673
so part of: LOC101874835
location: complement(join(357277..357436,358630..358822,359940..360392,362640..363173,363954..364083,364180..364481,365585..366082,367931..368095,376298..376663,376838..379275,381839..381899,394309..394669))
location: region:357277-394669:-1
so has part: feature:394309-394669:-1:exon
so has part: feature:381839-381899:-1:exon
so has part: feature:376838-379275:-1:exon
so has part: feature:376298-376663:-1:exon
so has part: feature:367931-368095:-1:exon
so has part: feature:365585-366082:-1:exon
so has part: feature:364180-364481:-1:exon
so has part: feature:363954-364083:-1:exon
so has part: feature:362640-363173:-1:exon
so has part: feature:359940-360392:-1:exon
so has part: feature:358630-358822:-1:exon
so has part: feature:357277-357436:-1:exon

XP_033927827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394309-394669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381839-381899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376838-379275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376298-376663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367931-368095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365585-366082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:364180-364481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:363954-364083:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:362640-363173:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:359940-360392:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:358630-358822:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:357277-357436:-1:exon

LOC101874835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101874835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wiz isoform X1
translation: MERAVPSFSGCQGDGGRALLMPPEPGHEQYPPLEGPQGEEPRAAFLQDPKKPLDNPRSSVGTEAELEEDAFYAEDDLEAVSREGKGPSSVELCPLQEEPDFFSSLARQEPDVALEAEDVADEPDPALSGAVPAAAHRTELGSTNEEHLEFKKALYRADARSSLELRSMAWDTSPLESRAGDGREESTLKRLSGLKDLKDSRCGKEGPFAMEPQVDPESDSEELGAGKGAAGPPSPCAGASLGGGEDKYLKTEPKQLEGLGKEHLEKSKRGIQRVDWTSRPTRSPSPHYKELGKVTDVASNLPYRGQAVREVPPPLFRKTLNPVLSKAKALESSSHRKGLLVESDLGEINPLNAAEWTIPKLSAELAVGKQTWTVNAEDSVERMPLMPLDPAPCSSYDIEMRPYVCSVLVEEQGKEELGPEEDPTVYTCIECSIYFKKKEHLMDHMLQHNRGPARDQDRDALGQCQFCCNECGWAFGDPASLEQHKRLHQESREKIIEEIQKLNECPDEGRDARLQCPKCVFGTNSSKIFVQHAKMHVKERKDQGAKKLNLFGSTSSGEIQDSPIYKPFKPNEHVALQMQVPPQSSSKGLSTCVLCSFPAPNDTILKEHMKYAHSHLSWDTEGYEDDPNQPGTSRDAYSPSRPARFADTDYFGKAEQLYPPASQESTSHYEAVPSFTLTHPRHKSNGAGKKDYQASGFHARKAAPYGAPHKTSGLSGFPSAKAYSHFALQQLKRKGGAQALEEGDALRGHPMGLEELRHKWLLGSDAVSMEEEISGSTEMELGENRGTRALSIPQAALDLKRTFRDTLKATDPSLASEEQQQQLRMMVPIVLLEELNLHPKATKRPRGKPYKKKALLPSRDFLMEEPLPLDMLLLDPPLELDDLLDSDSPMLKNEERKCPYCPDRFHNGIGLANHVRGHLNRVGVSYNVRHFISAEEVKAIEQKFSFQKKKKKGIANFDPSTFSLMRCEFCGAGFDTRAGLSSHARAHLRDFGITNWELTISPINILKELLANSSEHPMLQAAMAAEPSSPSRERDAHGFGPRKSMTPMSECSIPRSPLSPFPTSWGDESLQSYRDVLAPEEEELVAMEVASPPLPKKSLPSGQLDPPPSRIGTKVSPEPPGSKAEPQDPKTQSLTTCEVCGACFETRKGLSSHARSHLRQLGVAESESSGAPIDLLYELMKQKGKPDGSPIAAPLGKKPPKEPGTAAPRPSLLALAKGGERPTDGPVNKAIKSPPGFSKSLSQPGSPILKKVPGALSGSPSPKNPEEKSSKLSLSPLQSSPSAQWPQAEEEGPLNLTSGAEPVRDIRCEFCGEYFENRKGLSSHARSHLRQMGVTEWYVNGSPIDTLREILKRRSQPRSSSNPVPGHKAMAKSLLSTMGSLEARGPGDFHLQTLPKKVQAGSPMGQSPTSSPPPTARKMFPGLSPPSLQKKLKQDQLRLEIKREMMSGGLHGEAHPSDPAWPPREDMSPLNLSSRAEPVRDIRCEFCGEYFENRKGLSSHARSHLRQMGVTEWSVNGSPIDTLREILKKKTKPCVVKKEPHPSSIEPPKGLTEEGLEPKSPGKILQGMTLAPLGGRSGKPGPGSSGLSRDLALAPMGTKGQGGFLTPLAAKRPLQDERLGPHPADVKHKGFIQTELPFKAKAVHEKPAHTSGEACCELCGLYFENRKALASHARAHLRQFGVTEWCVNGSPIETLSEWIRHRPQKAGAYRSYIQGGRPFTKKFRSHGRDHHHHHHHNGGARRVPLGMQAGAMAFLSKGLAGELAHGEAGKMLDGGGAGDRPMVTSPLSLVKLEEHQRSNISKFERRQARPLDAPIHRPEDGAEFQQKLEETRQPPPRVRPVPSLVPRPPQTSLVKFVGNIYTLKCRFCEVEFQGPLSIQEEWVRHLQRHILEMNFSKVDPIRGEAPPQPEPPAMAEAQ
SIO_010081: LOC101874835
subclass of: SO_0000673
so part of: LOC101874835
location: complement(join(357277..357436,358630..358822,359940..360392,362640..363173,363954..364481,365585..366082,367931..368095,376298..376663,376838..379275,381839..381899,394309..394669))
location: region:357277-394669:-1
so has part: feature:394309-394669:-1:exon
so has part: feature:381839-381899:-1:exon
so has part: feature:376838-379275:-1:exon
so has part: feature:376298-376663:-1:exon
so has part: feature:367931-368095:-1:exon
so has part: feature:365585-366082:-1:exon
so has part: feature:363954-364481:-1:exon
so has part: feature:362640-363173:-1:exon
so has part: feature:359940-360392:-1:exon
so has part: feature:358630-358822:-1:exon
so has part: feature:357277-357436:-1:exon

XP_033927825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394309-394669:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381839-381899:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376838-379275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376298-376663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367931-368095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365585-366082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363954-364481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:362640-363173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:359940-360392:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358630-358822:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:357277-357436:-1:exon

LOC101874835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101874835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wiz isoform X4
translation: MAASTSSQPKVTKAAAPPRPRDRDRGGDGEPEPEAGPEPVLAPEEEELVAMEVASPPLPKKSLPSGQLDPPPSRIGTKVSPEPPGSKAEPQDPKTQSLTTCEVCGACFETRKGLSSHARSHLRQLGVAESESSGAPIDLLYELMKQKGKPDGSPIAAPLGKKPPKEPGTAAPRPSLLALAKGGERPTDGPVNKAIKSPPGFSKSLSQPGSPILKKVPGALSGSPSPKNPEEKSSKLSLSPLQSSPSAQWPQAEEEGPLNLTSGAEPVRDIRCEFCGEYFENRKGLSSHARSHLRQMGVTEWYVNGSPIDTLREILKRRSQPRSSSNPVPGHKAMAKSLLSTMGSLEARGPGDFHLQTLPKKVQAGSPMGQSPTSSPPPTARKMFPGLSPPSLQKKLKQDQLRLEIKREMMSGGLHGEAHPSDPAWPPREDMSPLNLSSRAEPVRDIRCEFCGEYFENRKGLSSHARSHLRQMGVTEWSVNGSPIDTLREILKKKTKPCVVKKEPHPSSIEPPKGLTEEGLEPKSPGKILQGMTLAPLGGRSGKPGPGSSGLSRDLALAPMGTKGQGGFLTPLAAKRPLQDERLGPHPADVKHKGFIQTELPFKAKAVHEKPAHTSGEACCELCGLYFENRKALASHARAHLRQFGVTEWCVNGSPIETLSEWIRHRPQKAGAYRSYIQGGRPFTKKFRSHGRDHHHHHHHNGGARRVPLGMQAGAMAFLSKGLAGELAHGEAGKMLDGGGAGDRPMVTSPLSLVKLEEHQRSNISKFERRQARPLDAPIHRPEDGAEFQQKLEETRQPPPRVRPVPSLVPRPPQTSLVKFVGNIYTLKCRFCEVEFQGPLSIQEEWVRHLQRHILEMNFSKVDPIRGEAPPQPEPPAMAEAQ
SIO_010081: LOC101874835
subclass of: SO_0000673
so part of: LOC101874835
location: complement(join(357277..357436,358630..358822,359940..360392,362640..363173,363954..364481,365585..366082,367931..368095,369865..369982))
location: region:357277-369982:-1
so has part: feature:369865-369982:-1:exon
so has part: feature:367931-368095:-1:exon
so has part: feature:365585-366082:-1:exon
so has part: feature:363954-364481:-1:exon
so has part: feature:362640-363173:-1:exon
so has part: feature:359940-360392:-1:exon
so has part: feature:358630-358822:-1:exon
so has part: feature:357277-357436:-1:exon

XP_033927828.1
type: Protein
SIO_000068: ncbiprotein

position:369982:-1
position: 369982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369865-369982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367931-368095:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365585-366082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363954-364481:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362640-363173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:359940-360392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:358630-358822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357277-357436:-1:exon

LOC117437576
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 402586..411618
location: region:402586-411618:1
so has part: feature:402586-411618:1:exon
subclass of: SO_0000010

117437576
type: Gene
SIO_000068: ncbigene

position:402586:1
position: 402586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411618:1
position: 411618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402586-411618:1:exon

LOC117437576
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437576
product: intercellular adhesion molecule 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034072081.1
SIO_010081: LOC117437576
subclass of: SO_0000673
so part of: LOC117437576
location: join(402586..402643,403694..403972,405228..405539,406527..406805,407351..407629,407781..408023,408467..408718,410443..410688,410846..411109,411186..411618)
location: region:402586-411618:1
so has part: feature:402586-402643:1:exon
so has part: feature:403694-403972:1:exon
so has part: feature:405228-405539:1:exon
so has part: feature:406527-406805:1:exon
so has part: feature:407351-407629:1:exon
so has part: feature:407781-408023:1:exon
so has part: feature:408467-408718:1:exon
so has part: feature:410443-410688:1:exon
so has part: feature:410846-411109:1:exon
so has part: feature:411186-411618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402586-402643:1:exon

position:402643:1
position: 402643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:403694-403972:1:exon

position:403694:1
position: 403694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403972:1
position: 403972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405228-405539:1:exon

position:405228:1
position: 405228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405539:1
position: 405539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:406527-406805:1:exon

position:406527:1
position: 406527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406805:1
position: 406805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:407351-407629:1:exon

position:407351:1
position: 407351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407629:1
position: 407629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:407781-408023:1:exon

position:407781:1
position: 407781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408023:1
position: 408023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:408467-408718:1:exon

position:408467:1
position: 408467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408718:1
position: 408718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:410443-410688:1:exon

position:410443:1
position: 410443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410688:1
position: 410688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:410846-411109:1:exon

position:410846:1
position: 410846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411109:1
position: 411109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:411186-411618:1:exon

position:411186:1
position: 411186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437576
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intercellular adhesion molecule 5-like
translation: MDPPSTAVLLLPPLILALAGAACGVFTVWAWPRVAVVPYGGSVAINCSRSACPLGNTTLGLDTPLLVALGATGHQWQSFWLLNVSQWNPGKATCYGQCGDSQGNASAEVLVYRLPDQVLLDPLPPLPMGESQNLTCHVLEVAPVVNLTVTLRRGADTLRTVGFGAVNGSTNVTVTHVLSAGPEDHGQDVTCHAELSLRPHGPLFASAAVPIRLSVFALPEPPELQAPSHMELGTTGTASCQVTGAFPIADVGFTITMAGQSLNVTTTVVGDVLTSITRLVPSMVGALELVCTVTVATAARTARRLIHVYRFPAPILELSPVPAPAGTEVLVLCRIDAAEPPALWLQLRDADNGILAEGPHSQLELPLVAGRGDDRRRFRCRASLDVDGNTVTKDVDNQLSVLYMPDLAVNDCPGIRTWLQGTWEALSCHATGNPIPTVSCGRDGVTISTTVPELVTRSRAGTYICNATNSLGTQSRLVTVNVEYEPTLTERGCPTHRLWVEGEQRELSCRADGDPAPSTHCTRDDGTTGGRLTTQQRVVDRGDAGSYTCRASNKHGTAERSVVVTVEYKPSMADPGCPSQRLWVEGTPAELLCAATGNPQPHVTCTKLGDGYPPMTTSTNVTRAHAGTYQCQATNSRGSALRNVTITVEYSPTTVTLRVLPSAAVSSGTSLSVECRADGLPPPTYGWVLPPAPNLRFGTGNHSVTITGAGTVNGGVYTCTASNRHGWQAGSIMVRVDENRLVLVASLGSVGAITAVGLVAAGGYYLKSTACKKGEYNVRDAEGTLEAACLHRQHHGQAEVYGIQLTQP
SIO_010081: LOC117437576
subclass of: SO_0000673
so part of: LOC117437576
location: join(402586..402643,403694..403972,405228..405539,406527..406805,407351..407629,407781..408023,408467..408718,410443..410688,410846..411109,411186..411400)
location: region:402586-411400:1
so has part: feature:402586-402643:1:exon
so has part: feature:403694-403972:1:exon
so has part: feature:405228-405539:1:exon
so has part: feature:406527-406805:1:exon
so has part: feature:407351-407629:1:exon
so has part: feature:407781-408023:1:exon
so has part: feature:408467-408718:1:exon
so has part: feature:410443-410688:1:exon
so has part: feature:410846-411109:1:exon
so has part: feature:411186-411400:1:exon

XP_033927972.1
type: Protein
SIO_000068: ncbiprotein

position:411400:1
position: 411400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402586-402643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403694-403972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405228-405539:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406527-406805:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:407351-407629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:407781-408023:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:408467-408718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:410443-410688:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:410846-411109:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:411186-411400:1:exon

LOC117437577
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(413202..422799)
location: region:413202-422799:-1
so has part: feature:413202-422799:-1:exon
subclass of: SO_0000010

117437577
type: Gene
SIO_000068: ncbigene

position:413202:-1
position: 413202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422799:-1
position: 422799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413202-422799:-1:exon

LOC117437577
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437577
product: bestrophin 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072082.1
SIO_010081: LOC117437577
subclass of: SO_0000673
so part of: LOC117437577
location: complement(join(413202..413393,414461..414609,415601..415681,416370..416449,416705..416777,418161..418238,418887..419226,419880..419999,420031..420040,420114..420188,421606..421666,422721..422799))
location: region:413202-422799:-1
so has part: feature:422721-422799:-1:exon
so has part: feature:421606-421666:-1:exon
so has part: feature:420114-420188:-1:exon
so has part: feature:420031-420040:-1:exon
so has part: feature:419880-419999:-1:exon
so has part: feature:418887-419226:-1:exon
so has part: feature:418161-418238:-1:exon
so has part: feature:416705-416777:-1:exon
so has part: feature:416370-416449:-1:exon
so has part: feature:415601-415681:-1:exon
so has part: feature:414461-414609:-1:exon
so has part: feature:413202-413393:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422721-422799:-1:exon

position:422721:-1
position: 422721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421606-421666:-1:exon

position:421606:-1
position: 421606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421666:-1
position: 421666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:420114-420188:-1:exon

position:420114:-1
position: 420114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420188:-1
position: 420188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420031-420040:-1:exon

position:420031:-1
position: 420031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420040:-1
position: 420040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:419880-419999:-1:exon

position:419880:-1
position: 419880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419999:-1
position: 419999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:418887-419226:-1:exon

position:418887:-1
position: 418887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419226:-1
position: 419226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:418161-418238:-1:exon

position:418161:-1
position: 418161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418238:-1
position: 418238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:416705-416777:-1:exon

position:416705:-1
position: 416705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416777:-1
position: 416777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:416370-416449:-1:exon

position:416370:-1
position: 416370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416449:-1
position: 416449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:415601-415681:-1:exon

position:415601:-1
position: 415601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415681:-1
position: 415681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:414461-414609:-1:exon

position:414461:-1
position: 414461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414609:-1
position: 414609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:413202-413393:-1:exon

position:413393:-1
position: 413393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437577
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437577
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: bestrophin-2
translation: MTVTYTSRVATARFGGFSRLLLLWRGSFYVAVVLERWWAQFRSQYPHTSQYIPVPPIIGFYVALVLERWWAQFLCFRSVPAPDGLMLAVVGSVHGSDTRGRLLRRTMMRYGSLAACHHSHSDVTVTVNDVTVTVSDITVTLSDVTLTINDVTVAVSDVTFTISDVTNTINDVTLPPPPHWLRVPAPLLQQLRSPHNQFWVTCXWFSALAAQARTEGRVRDDGAFKLLMEELNRFRAHCSLLFHYDWISVPLVYTQVVTIAVYTFFVTCLIGRQFLDPAQGYAGHELDLGLPVFTLLQFFFYVGWLKVAEQLINPFGEDDDDFETNTLIDRNFQVSMLAVDELYGQLPALEQDRSWDTNSPRAPYTAAASLRQQPFRGSASDITLAKEEMQFLPLEDIGETPECHGGNGDRPRGDSVPYEDWLLHPNADDMV
SIO_010081: LOC117437577
subclass of: SO_0000673
so part of: LOC117437577
location: complement(join(413246..413393,414461..414609,415601..415681,416370..416449,416705..416777,418161..418238,418887..419226,419880..419999,420031..420040,420114..420188,421606..421666,422721..422799))
location: region:413246-422799:-1
so has part: feature:422721-422799:-1:exon
so has part: feature:421606-421666:-1:exon
so has part: feature:420114-420188:-1:exon
so has part: feature:420031-420040:-1:exon
so has part: feature:419880-419999:-1:exon
so has part: feature:418887-419226:-1:exon
so has part: feature:418161-418238:-1:exon
so has part: feature:416705-416777:-1:exon
so has part: feature:416370-416449:-1:exon
so has part: feature:415601-415681:-1:exon
so has part: feature:414461-414609:-1:exon
so has part: feature:413246-413393:-1:exon

XP_033927973.1
type: Protein
SIO_000068: ncbiprotein

position:413246:-1
position: 413246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422721-422799:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421606-421666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420114-420188:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420031-420040:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419880-419999:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418887-419226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418161-418238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:416705-416777:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416370-416449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:415601-415681:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414461-414609:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:413246-413393:-1:exon

LOC117437531
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(423882..441364)
location: region:423882-441364:-1
so has part: feature:423882-441364:-1:exon
subclass of: SO_0000010

117437531
type: Gene
SIO_000068: ncbigene

position:423882:-1
position: 423882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441364:-1
position: 441364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423882-441364:-1:exon

LOC117437531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437531
product: guided entry of tail-anchored proteins factor 3, ATPase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071949.1
SIO_010081: LOC117437531
subclass of: SO_0000673
so part of: LOC117437531
location: complement(join(423882..424088,427232..427429,429462..429569,430102..430252,431063..431211,437533..437680,441171..441364))
location: region:423882-441364:-1
so has part: feature:441171-441364:-1:exon
so has part: feature:437533-437680:-1:exon
so has part: feature:431063-431211:-1:exon
so has part: feature:430102-430252:-1:exon
so has part: feature:429462-429569:-1:exon
so has part: feature:427232-427429:-1:exon
so has part: feature:423882-424088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441171-441364:-1:exon

position:441171:-1
position: 441171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437533-437680:-1:exon

position:437533:-1
position: 437533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437680:-1
position: 437680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:431063-431211:-1:exon

position:431063:-1
position: 431063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431211:-1
position: 431211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:430102-430252:-1:exon

position:430102:-1
position: 430102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430252:-1
position: 430252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:429462-429569:-1:exon

position:429462:-1
position: 429462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429569:-1
position: 429569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:427232-427429:-1:exon

position:427232:-1
position: 427232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427429:-1
position: 427429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:423882-424088:-1:exon

position:424088:-1
position: 424088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATPase GET3
translation: MRGREGRRGKMAAGGGGGCAPEQEQFEDAPDVEPLEPTLGNVVEQKSLKWIFVGGKGGVGKTTCSCSLAVQLSRLRSSVLLISTDPAHNISDAFDQKFSKVPTKVQGYENLFAMEIDPSLGVAELPDEFFEEDNVLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFRDPEQTTFICVCIAEFLSLYETERLIQELAKCHIDTHNIVVNQLVFPDPLRPCRMCEARHRIQAKYLDQMEDLYEDFHIVKLPLLPHEVRGADKVNSFSSLLLDPYQPPSPK
SIO_010081: LOC117437531
subclass of: SO_0000673
so part of: LOC117437531
location: complement(join(423957..424088,427232..427429,429462..429569,430102..430252,431063..431211,437533..437680,441171..441364))
location: region:423957-441364:-1
so has part: feature:441171-441364:-1:exon
so has part: feature:437533-437680:-1:exon
so has part: feature:431063-431211:-1:exon
so has part: feature:430102-430252:-1:exon
so has part: feature:429462-429569:-1:exon
so has part: feature:427232-427429:-1:exon
so has part: feature:423957-424088:-1:exon

XP_033927840.1
type: Protein
SIO_000068: ncbiprotein

position:423957:-1
position: 423957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441171-441364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437533-437680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431063-431211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430102-430252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:429462-429569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427232-427429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:423957-424088:-1:exon

LOC101880281
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101880281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(443681..458184)
location: region:443681-458184:-1
so has part: feature:443681-458184:-1:exon
subclass of: SO_0000010

101880281
type: Gene
SIO_000068: ncbigene

position:443681:-1
position: 443681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458184:-1
position: 458184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443681-458184:-1:exon

LOC101880281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101880281
product: lysosomal alpha-mannosidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071951.1
SIO_010081: LOC101880281
subclass of: SO_0000673
so part of: LOC101880281
location: complement(join(443681..443825,443904..444006,444413..444562,445224..445460,445938..446018,446101..446188,446257..446358,446433..446551,446624..446747,446819..446916,447000..447194,447268..447384,447462..447569,447660..447769,447830..447908,448378..448498,449561..449643,450421..450537,451484..451626,453071..453203,455171..455364,456320..456493,457118..457220,458091..458184))
location: region:443681-458184:-1
so has part: feature:458091-458184:-1:exon
so has part: feature:457118-457220:-1:exon
so has part: feature:456320-456493:-1:exon
so has part: feature:455171-455364:-1:exon
so has part: feature:453071-453203:-1:exon
so has part: feature:451484-451626:-1:exon
so has part: feature:450421-450537:-1:exon
so has part: feature:449561-449643:-1:exon
so has part: feature:448378-448498:-1:exon
so has part: feature:447830-447908:-1:exon
so has part: feature:447660-447769:-1:exon
so has part: feature:447462-447569:-1:exon
so has part: feature:447268-447384:-1:exon
so has part: feature:447000-447194:-1:exon
so has part: feature:446819-446916:-1:exon
so has part: feature:446624-446747:-1:exon
so has part: feature:446433-446551:-1:exon
so has part: feature:446257-446358:-1:exon
so has part: feature:446101-446188:-1:exon
so has part: feature:445938-446018:-1:exon
so has part: feature:445224-445460:-1:exon
so has part: feature:444413-444562:-1:exon
so has part: feature:443904-444006:-1:exon
so has part: feature:443681-443825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458091-458184:-1:exon

position:458091:-1
position: 458091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457118-457220:-1:exon

position:457118:-1
position: 457118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457220:-1
position: 457220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456320-456493:-1:exon

position:456320:-1
position: 456320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456493:-1
position: 456493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:455171-455364:-1:exon

position:455171:-1
position: 455171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455364:-1
position: 455364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:453071-453203:-1:exon

position:453071:-1
position: 453071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453203:-1
position: 453203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:451484-451626:-1:exon

position:451484:-1
position: 451484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451626:-1
position: 451626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:450421-450537:-1:exon

position:450421:-1
position: 450421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450537:-1
position: 450537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:449561-449643:-1:exon

position:449561:-1
position: 449561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449643:-1
position: 449643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:448378-448498:-1:exon

position:448378:-1
position: 448378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448498:-1
position: 448498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:447830-447908:-1:exon

position:447830:-1
position: 447830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447908:-1
position: 447908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:447660-447769:-1:exon

position:447660:-1
position: 447660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447769:-1
position: 447769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:447462-447569:-1:exon

position:447462:-1
position: 447462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447569:-1
position: 447569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:447268-447384:-1:exon

position:447268:-1
position: 447268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447384:-1
position: 447384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:447000-447194:-1:exon

position:447000:-1
position: 447000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447194:-1
position: 447194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:446819-446916:-1:exon

position:446819:-1
position: 446819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446916:-1
position: 446916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:446624-446747:-1:exon

position:446624:-1
position: 446624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446747:-1
position: 446747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:446433-446551:-1:exon

position:446433:-1
position: 446433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446551:-1
position: 446551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:446257-446358:-1:exon

position:446257:-1
position: 446257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446358:-1
position: 446358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:446101-446188:-1:exon

position:446101:-1
position: 446101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446188:-1
position: 446188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:445938-446018:-1:exon

position:445938:-1
position: 445938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446018:-1
position: 446018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:445224-445460:-1:exon

position:445224:-1
position: 445224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445460:-1
position: 445460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:444413-444562:-1:exon

position:444413:-1
position: 444413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444562:-1
position: 444562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:443904-444006:-1:exon

position:443904:-1
position: 443904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444006:-1
position: 444006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:443681-443825:-1:exon

position:443825:-1
position: 443825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101880281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101880281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal alpha-mannosidase
translation: MAAPVVVVPLMLLGSVLGCGYRSCPTTSPDLLNVHLVPHTHDDVGWLKTVEQYFYGVHNDVQHAGVQYILDSVLVELVAQPSRRFIYAEVAFLQRWWRMQDEATRSILRQLVQEGRLELVGGGWTMADEAVTHYSSVLEQLGLGLGFLYRELGGCGTPRVAWQIDPFGHSRHSAAAFAQLGYDGLFLGRIDHQDKAQREQSRNMEMIWRGSGNLQSSGSDLFTGILPNMYNPPTGFCWDQLCSDPPIVDGDSEENNVGSIVSSFLDTANKQAKHYRTNHIIMTMGSDFHYENANLWFKNMDKLIAHVNAQQSNGSRVHVLYSTPSCYLWELHQSNLSWPLKLDDFFPYSDGPHQFWTGFYTSRPALKLYERLSNNFLQICSQLEALAGPAAHDGPYGHGDSSMLREAVAVAQHHDAVTGTEKQHVANDYAKQLAMGWERCQLLVSNALSSLMGTKETFTFCNSLNISVCPLTEASSQFIVILYNPLGRRVSYPIRLPVNGVSYSVTDPHGQPVPSEVVPVSITTHGLYGNSVGALQELLFEASAPPVGFSTFTVTQSPHRDPNVHPIQPPAQPQPWDIRNEHLRVLFDPLTGHMKEIQNLAKNISLPVSQSFYWYNASIGNDESPQASGAYIFRPNSSDPIPISGSQRIHTSLVKNSLVQELHQTFSSWCSQVVRLYMGQPYVELEWTVGPIPVGDGWGKEIISRFQTPLQTRGRFYTDSNGRQMMERRRDHRPTWNLSQTEPVAGNYYPVTSRIFIRDEKIQLTVLTDRSQGGSSIFDGSMELMVHRRLLYDDNRGVGEPLLEQDGDHRGLVVRGHHVLLLDTVSDAADGHRLRAQELFMAPYPVLAPGGGAPYRPQQGGLREFSALRRELPPNIHLLTLAPRDNGTLLLRLEHQFETGESRNNSQPVTIDLLDLFSAFTITSVQEMNLGGFQPLDAISRLVWTPTTGPSQSKPVTKLDPRRVTLQPMDIRTFLVHYEGPGAAHGGL
SIO_010081: LOC101880281
subclass of: SO_0000673
so part of: LOC101880281
location: complement(join(443704..443825,443904..444006,444413..444562,445224..445460,445938..446018,446101..446188,446257..446358,446433..446551,446624..446747,446819..446916,447000..447194,447268..447384,447462..447569,447660..447769,447830..447908,448378..448498,449561..449643,450421..450537,451484..451626,453071..453203,455171..455364,456320..456493,457118..457220,458091..458156))
location: region:443704-458156:-1
so has part: feature:458091-458156:-1:exon
so has part: feature:457118-457220:-1:exon
so has part: feature:456320-456493:-1:exon
so has part: feature:455171-455364:-1:exon
so has part: feature:453071-453203:-1:exon
so has part: feature:451484-451626:-1:exon
so has part: feature:450421-450537:-1:exon
so has part: feature:449561-449643:-1:exon
so has part: feature:448378-448498:-1:exon
so has part: feature:447830-447908:-1:exon
so has part: feature:447660-447769:-1:exon
so has part: feature:447462-447569:-1:exon
so has part: feature:447268-447384:-1:exon
so has part: feature:447000-447194:-1:exon
so has part: feature:446819-446916:-1:exon
so has part: feature:446624-446747:-1:exon
so has part: feature:446433-446551:-1:exon
so has part: feature:446257-446358:-1:exon
so has part: feature:446101-446188:-1:exon
so has part: feature:445938-446018:-1:exon
so has part: feature:445224-445460:-1:exon
so has part: feature:444413-444562:-1:exon
so has part: feature:443904-444006:-1:exon
so has part: feature:443704-443825:-1:exon

XP_033927842.1
type: Protein
SIO_000068: ncbiprotein

position:443704:-1
position: 443704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458156:-1
position: 458156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458091-458156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457118-457220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456320-456493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455171-455364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453071-453203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451484-451626:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450421-450537:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449561-449643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448378-448498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447830-447908:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447660-447769:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:447462-447569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:447268-447384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:447000-447194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:446819-446916:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:446624-446747:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:446433-446551:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:446257-446358:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:446101-446188:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:445938-446018:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:445224-445460:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:444413-444562:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:443904-444006:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:443704-443825:-1:exon

LOC117437562
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(460291..464973)
location: region:460291-464973:-1
so has part: feature:460291-464973:-1:exon
subclass of: SO_0000010

117437562
type: Gene
SIO_000068: ncbigene

position:460291:-1
position: 460291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464973:-1
position: 464973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460291-464973:-1:exon

LOC117437562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437562
product: WD repeat domain 83 opposite strand
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072051.1
SIO_010081: LOC117437562
subclass of: SO_0000673
so part of: LOC117437562
location: complement(join(460291..460420,461739..461836,464136..464241,464832..464973))
location: region:460291-464973:-1
so has part: feature:464832-464973:-1:exon
so has part: feature:464136-464241:-1:exon
so has part: feature:461739-461836:-1:exon
so has part: feature:460291-460420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464832-464973:-1:exon

position:464832:-1
position: 464832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464136-464241:-1:exon

position:464136:-1
position: 464136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464241:-1
position: 464241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:461739-461836:-1:exon

position:461739:-1
position: 461739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461836:-1
position: 461836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460291-460420:-1:exon

position:460420:-1
position: 460420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Asterix
translation: MADPRRTARVARYKPPAAETNPALEDPTPDYMNLLGMVFSMCGLMLKLKWCAWVAVYCSFISFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMSPPW
SIO_010081: LOC117437562
subclass of: SO_0000673
so part of: LOC117437562
location: complement(join(460354..460420,461739..461836,464136..464241,464832..464866))
location: region:460354-464866:-1
so has part: feature:464832-464866:-1:exon
so has part: feature:464136-464241:-1:exon
so has part: feature:461739-461836:-1:exon
so has part: feature:460354-460420:-1:exon

XP_033927942.1
type: Protein
SIO_000068: ncbiprotein

position:460354:-1
position: 460354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464866:-1
position: 464866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464832-464866:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464136-464241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:461739-461836:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460354-460420:-1:exon

LOC101870631
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101870631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 465249..471277
location: region:465249-471277:1
so has part: feature:465249-471277:1:exon
subclass of: SO_0000010

101870631
type: Gene
SIO_000068: ncbigene

position:465249:1
position: 465249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471277:1
position: 471277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465249-471277:1:exon

LOC101870631
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101870631
product: WD repeat domain 83
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072053.1
SIO_010081: LOC101870631
subclass of: SO_0000673
so part of: LOC101870631
location: join(465249..465396,466270..466390,467636..467741,469075..469123,469988..470114,470511..470578,470657..470765,470846..470960,471042..471277)
location: region:465249-471277:1
so has part: feature:465249-465396:1:exon
so has part: feature:466270-466390:1:exon
so has part: feature:467636-467741:1:exon
so has part: feature:469075-469123:1:exon
so has part: feature:469988-470114:1:exon
so has part: feature:470511-470578:1:exon
so has part: feature:470657-470765:1:exon
so has part: feature:470846-470960:1:exon
so has part: feature:471042-471277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465249-465396:1:exon

position:465396:1
position: 465396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466270-466390:1:exon

position:466270:1
position: 466270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466390:1
position: 466390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:467636-467741:1:exon

position:467636:1
position: 467636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467741:1
position: 467741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:469075-469123:1:exon

position:469075:1
position: 469075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469123:1
position: 469123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:469988-470114:1:exon

position:469988:1
position: 469988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470114:1
position: 470114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:470511-470578:1:exon

position:470511:1
position: 470511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470578:1
position: 470578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:470657-470765:1:exon

position:470657:1
position: 470657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470765:1
position: 470765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:470846-470960:1:exon

position:470846:1
position: 470846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470960:1
position: 470960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:471042-471277:1:exon

position:471042:1
position: 471042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101870631
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101870631
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat domain-containing protein 83
translation: MSFPLPRPRRPQLPQHRKRNIQCGQGAVRAVRFTARGSYCLTCGRDKSLKLWNPHRGSELSSYQGHGHEVLDAAGSYDNSHICSCGADKTVALWDVATGQVLRKYRGHAGKVNSVQFNAEGTVIVSGSIDSSVRCWDCRSRRSDPIQVLDEATDGISSVGLSDHEILSGSVDGHIRRYDLRMGQLYSDYVGSPITSVCFTKDAQCTLIASLDSTLRLLDKDTGELLGEYRGHQSTMYRLDCVLSEQDTHVGCASEDGHVYLWDLVEGSLACKLPVGHSVVQSISFHPTSPCLLAAIEGQIQLWTEEPIEEM
SIO_010081: LOC101870631
subclass of: SO_0000673
so part of: LOC101870631
location: join(465294..465396,466270..466390,467636..467741,469075..469123,469988..470114,470511..470578,470657..470765,470846..470960,471042..471179)
location: region:465294-471179:1
so has part: feature:465294-465396:1:exon
so has part: feature:466270-466390:1:exon
so has part: feature:467636-467741:1:exon
so has part: feature:469075-469123:1:exon
so has part: feature:469988-470114:1:exon
so has part: feature:470511-470578:1:exon
so has part: feature:470657-470765:1:exon
so has part: feature:470846-470960:1:exon
so has part: feature:471042-471179:1:exon

XP_033927944.1
type: Protein
SIO_000068: ncbiprotein

position:465294:1
position: 465294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471179:1
position: 471179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465294-465396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466270-466390:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467636-467741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469075-469123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469988-470114:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470511-470578:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:470657-470765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470846-470960:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471042-471179:1:exon

LOC117437563
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(471338..477736)
location: region:471338-477736:-1
so has part: feature:471338-477736:-1:exon
subclass of: SO_0000010

117437563
type: Gene
SIO_000068: ncbigene

position:471338:-1
position: 471338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477736:-1
position: 477736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471338-477736:-1:exon

LOC117437563
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437563
product: deoxyhypusine synthase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072052.1
SIO_010081: LOC117437563
subclass of: SO_0000673
so part of: LOC117437563
location: complement(join(471338..471582,472296..472421,473244..473347,473674..473779,474241..474327,474558..474654,475363..475484,476087..476248,477482..477736))
location: region:471338-477736:-1
so has part: feature:477482-477736:-1:exon
so has part: feature:476087-476248:-1:exon
so has part: feature:475363-475484:-1:exon
so has part: feature:474558-474654:-1:exon
so has part: feature:474241-474327:-1:exon
so has part: feature:473674-473779:-1:exon
so has part: feature:473244-473347:-1:exon
so has part: feature:472296-472421:-1:exon
so has part: feature:471338-471582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477482-477736:-1:exon

position:477482:-1
position: 477482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476087-476248:-1:exon

position:476087:-1
position: 476087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476248:-1
position: 476248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:475363-475484:-1:exon

position:475363:-1
position: 475363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475484:-1
position: 475484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:474558-474654:-1:exon

position:474558:-1
position: 474558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474654:-1
position: 474654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:474241-474327:-1:exon

position:474241:-1
position: 474241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474327:-1
position: 474327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:473674-473779:-1:exon

position:473674:-1
position: 473674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473779:-1
position: 473779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:473244-473347:-1:exon

position:473244:-1
position: 473244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473347:-1
position: 473347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:472296-472421:-1:exon

position:472296:-1
position: 472296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472421:-1
position: 472421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:471338-471582:-1:exon

position:471582:-1
position: 471582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437563
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxyhypusine synthase
translation: MAAPVPAPTGAVRAVLRPSGALPPGALPVRGYDFRGGPDHAELLRSFLTTGFQATSFAQAAAEINRMIDAKLQPLTQEEQARAALGGLRPTTGCTIFLGFTSNIISSGVRESIRYLLQHNMVDVVVTTAGGVEEDLIKCMAHTYIGDFSLRGRELRDNGINRIGNLLVPNDNYCKFEDWVMPILDRMVEEQETQGTKWTPSKMIARLGQEIDNPESVWYWAQKNRIPVLSPALTDGSLGDMIFFHSYKRPGLVLDIVEDLRLINTEAIFARKTGMIILGGGLVKHHIANANLMRNGADFSVYVNTGQEFDGSDSGARPDEAVSWGKIRTDATPVKVYADASIVFPLLVAETFAQRADAFPMGPAP
SIO_010081: LOC117437563
subclass of: SO_0000673
so part of: LOC117437563
location: complement(join(471490..471582,472296..472421,473244..473347,473674..473779,474241..474327,474558..474654,475363..475484,476087..476248,477482..477682))
location: region:471490-477682:-1
so has part: feature:477482-477682:-1:exon
so has part: feature:476087-476248:-1:exon
so has part: feature:475363-475484:-1:exon
so has part: feature:474558-474654:-1:exon
so has part: feature:474241-474327:-1:exon
so has part: feature:473674-473779:-1:exon
so has part: feature:473244-473347:-1:exon
so has part: feature:472296-472421:-1:exon
so has part: feature:471490-471582:-1:exon

XP_033927943.1
type: Protein
SIO_000068: ncbiprotein

position:471490:-1
position: 471490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477682:-1
position: 477682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477482-477682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476087-476248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475363-475484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474558-474654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474241-474327:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473674-473779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473244-473347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472296-472421:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471490-471582:-1:exon

LOC117437578
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(478904..491743)
location: region:478904-491743:-1
so has part: feature:478904-491743:-1:exon
subclass of: SO_0000010

117437578
type: Gene
SIO_000068: ncbigene

position:478904:-1
position: 478904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491743:-1
position: 491743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478904-491743:-1:exon

LOC117437578
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437578
product: F-box and WD repeat domain containing 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072083.1
SIO_010081: LOC117437578
subclass of: SO_0000673
so part of: LOC117437578
location: complement(join(478904..479022,481801..481866,481952..482041,483347..483460,485157..485305,485378..485469,486169..486281,488540..488668,489465..489604,490570..490818,490926..491463,491555..491743))
location: region:478904-491743:-1
so has part: feature:491555-491743:-1:exon
so has part: feature:490926-491463:-1:exon
so has part: feature:490570-490818:-1:exon
so has part: feature:489465-489604:-1:exon
so has part: feature:488540-488668:-1:exon
so has part: feature:486169-486281:-1:exon
so has part: feature:485378-485469:-1:exon
so has part: feature:485157-485305:-1:exon
so has part: feature:483347-483460:-1:exon
so has part: feature:481952-482041:-1:exon
so has part: feature:481801-481866:-1:exon
so has part: feature:478904-479022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491555-491743:-1:exon

position:491555:-1
position: 491555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:490926-491463:-1:exon

position:490926:-1
position: 490926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491463:-1
position: 491463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:490570-490818:-1:exon

position:490570:-1
position: 490570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490818:-1
position: 490818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:489465-489604:-1:exon

position:489465:-1
position: 489465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489604:-1
position: 489604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:488540-488668:-1:exon

position:488540:-1
position: 488540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488668:-1
position: 488668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:486169-486281:-1:exon

position:486169:-1
position: 486169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486281:-1
position: 486281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:485378-485469:-1:exon

position:485378:-1
position: 485378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485469:-1
position: 485469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:485157-485305:-1:exon

position:485157:-1
position: 485157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485305:-1
position: 485305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:483347-483460:-1:exon

position:483347:-1
position: 483347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483460:-1
position: 483460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:481952-482041:-1:exon

position:481952:-1
position: 481952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482041:-1
position: 482041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:481801-481866:-1:exon

position:481801:-1
position: 481801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481866:-1
position: 481866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:478904-479022:-1:exon

position:479022:-1
position: 479022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437578
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 9
translation: MEEPVEDPGPPVPVPVVPVPVVPVPVVPVVPVPVVPVPELPVTGHRSRPPSVTDGPVEDPGPSFRFRCLRFRFLCLRCLRYLRFRCRCQFRFRCLQFRFRCQFRYLRFRCQFRFRCPRFRFRCPRFRCLRFQCLFRCPRFRFRCQFRCLQFRFRCPRFRCQFRFRCLQFRFRCLFRCPRFRFRCQFRCLQFRCRCRRFRCPQFRFRCLRFRFRCLRFRCLRFRFRCLRFRCLRFRFRCRRFRFPVSPVPVPVSPVPVPVSPVPVPVSLLSLPPELLLRIGSFLSARFLREVLPHVCRKFRFLFRDWVTWRLRLLRSARGRFPVLEDEGYDWSAACVELEEHLQHWEGNGASMEHFSLAEGHFASVDTVLLLQGGRVCVSGARDRNVNVWDLQQLGRPHSNVLVKTLGTERTGTHKGWVWCLASQGSRVCSGSWDSSVKLWDLDAEGQQCGEIREKAAVLCLSYGPNVLITGTFNRTITIYDLRVGQPHMCSYRPHSSAVLALVADEELILSGSEDKTLVVYDRRMAKVLQRIQLETYLLSMSYNGAELWAGDNRGRVYVFGARSGTFHPIQYYDVGHRLQITGLWHSLGSLYTTSTDRSLRVHVPTDPPRTICSWTQDDVLNGLSVDGDVVAAASGGLTVEVWRLRP
SIO_010081: LOC117437578
subclass of: SO_0000673
so part of: LOC117437578
location: complement(join(478948..479022,481801..481866,481952..482041,483347..483460,485157..485305,485378..485469,486169..486281,488540..488668,489465..489604,490570..490818,490926..491463,491555..491743))
location: region:478948-491743:-1
so has part: feature:491555-491743:-1:exon
so has part: feature:490926-491463:-1:exon
so has part: feature:490570-490818:-1:exon
so has part: feature:489465-489604:-1:exon
so has part: feature:488540-488668:-1:exon
so has part: feature:486169-486281:-1:exon
so has part: feature:485378-485469:-1:exon
so has part: feature:485157-485305:-1:exon
so has part: feature:483347-483460:-1:exon
so has part: feature:481952-482041:-1:exon
so has part: feature:481801-481866:-1:exon
so has part: feature:478948-479022:-1:exon

XP_033927974.1
type: Protein
SIO_000068: ncbiprotein

position:478948:-1
position: 478948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491555-491743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490926-491463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490570-490818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489465-489604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488540-488668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:486169-486281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485378-485469:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485157-485305:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:483347-483460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481952-482041:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481801-481866:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:478948-479022:-1:exon

LOC115946117
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115946117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(494453..511779)
location: region:494453-511779:-1
so has part: feature:494453-511779:-1:exon
subclass of: SO_0000010

115946117
type: Gene
SIO_000068: ncbigene

position:494453:-1
position: 494453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511779:-1
position: 511779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494453-511779:-1:exon

LOC115946117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115946117
product: transportin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072001.1
SIO_010081: LOC115946117
subclass of: SO_0000673
so part of: LOC115946117
location: complement(join(494453..494607,494693..494824,494920..494994,495779..495878,495962..496037,496142..496237,497299..497397,498343..498430,498505..498663,498741..498848,498929..499015,500567..500738,501141..501366,503280..503432,504797..504962,506216..506276,506354..506472,507900..508022,508470..508551,509031..509164,509603..509709,509799..509948,511085..511160,511664..511779))
location: region:494453-511779:-1
so has part: feature:511664-511779:-1:exon
so has part: feature:511085-511160:-1:exon
so has part: feature:509799-509948:-1:exon
so has part: feature:509603-509709:-1:exon
so has part: feature:509031-509164:-1:exon
so has part: feature:508470-508551:-1:exon
so has part: feature:507900-508022:-1:exon
so has part: feature:506354-506472:-1:exon
so has part: feature:506216-506276:-1:exon
so has part: feature:504797-504962:-1:exon
so has part: feature:503280-503432:-1:exon
so has part: feature:501141-501366:-1:exon
so has part: feature:500567-500738:-1:exon
so has part: feature:498929-499015:-1:exon
so has part: feature:498741-498848:-1:exon
so has part: feature:498505-498663:-1:exon
so has part: feature:498343-498430:-1:exon
so has part: feature:497299-497397:-1:exon
so has part: feature:496142-496237:-1:exon
so has part: feature:495962-496037:-1:exon
so has part: feature:495779-495878:-1:exon
so has part: feature:494920-494994:-1:exon
so has part: feature:494693-494824:-1:exon
so has part: feature:494453-494607:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:511664-511779:-1:exon

position:511664:-1
position: 511664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511085-511160:-1:exon

position:511085:-1
position: 511085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511160:-1
position: 511160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:509799-509948:-1:exon

position:509799:-1
position: 509799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509948:-1
position: 509948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:509603-509709:-1:exon

position:509603:-1
position: 509603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509709:-1
position: 509709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:509031-509164:-1:exon

position:509031:-1
position: 509031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509164:-1
position: 509164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:508470-508551:-1:exon

position:508470:-1
position: 508470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508551:-1
position: 508551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:507900-508022:-1:exon

position:507900:-1
position: 507900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508022:-1
position: 508022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:506354-506472:-1:exon

position:506354:-1
position: 506354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506472:-1
position: 506472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:506216-506276:-1:exon

position:506216:-1
position: 506216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506276:-1
position: 506276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:504797-504962:-1:exon

position:504797:-1
position: 504797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504962:-1
position: 504962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:503280-503432:-1:exon

position:503280:-1
position: 503280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503432:-1
position: 503432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:501141-501366:-1:exon

position:501141:-1
position: 501141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501366:-1
position: 501366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:500567-500738:-1:exon

position:500567:-1
position: 500567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500738:-1
position: 500738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:498929-499015:-1:exon

position:498929:-1
position: 498929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499015:-1
position: 499015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:498741-498848:-1:exon

position:498741:-1
position: 498741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498848:-1
position: 498848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:498505-498663:-1:exon

position:498505:-1
position: 498505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498663:-1
position: 498663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:498343-498430:-1:exon

position:498343:-1
position: 498343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498430:-1
position: 498430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:497299-497397:-1:exon

position:497299:-1
position: 497299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497397:-1
position: 497397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:496142-496237:-1:exon

position:496142:-1
position: 496142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496237:-1
position: 496237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:495962-496037:-1:exon

position:495962:-1
position: 495962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496037:-1
position: 496037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:495779-495878:-1:exon

position:495779:-1
position: 495779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495878:-1
position: 495878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:494920-494994:-1:exon

position:494920:-1
position: 494920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494994:-1
position: 494994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:494693-494824:-1:exon

position:494693:-1
position: 494693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494824:-1
position: 494824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:494453-494607:-1:exon

position:494607:-1
position: 494607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115946117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115946117
product: transportin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072002.1
SIO_010081: LOC115946117
subclass of: SO_0000673
so part of: LOC115946117
location: complement(join(494453..494607,494693..494824,494920..494994,495779..495878,495962..496037,496142..496237,497299..497397,498343..498430,498505..498663,498741..498848,498929..499015,500567..500738,501141..501366,503280..503432,504797..504962,506216..506276,506354..506472,507900..508022,508470..508551,508868..508883))
location: region:494453-508883:-1
so has part: feature:508868-508883:-1:exon
so has part: feature:508470-508551:-1:exon
so has part: feature:507900-508022:-1:exon
so has part: feature:506354-506472:-1:exon
so has part: feature:506216-506276:-1:exon
so has part: feature:504797-504962:-1:exon
so has part: feature:503280-503432:-1:exon
so has part: feature:501141-501366:-1:exon
so has part: feature:500567-500738:-1:exon
so has part: feature:498929-499015:-1:exon
so has part: feature:498741-498848:-1:exon
so has part: feature:498505-498663:-1:exon
so has part: feature:498343-498430:-1:exon
so has part: feature:497299-497397:-1:exon
so has part: feature:496142-496237:-1:exon
so has part: feature:495962-496037:-1:exon
so has part: feature:495779-495878:-1:exon
so has part: feature:494920-494994:-1:exon
so has part: feature:494693-494824:-1:exon
so has part: feature:494453-494607:-1:exon

position:508883:-1
position: 508883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508868-508883:-1:exon

position:508868:-1
position: 508868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508470-508551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507900-508022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506354-506472:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506216-506276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:504797-504962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503280-503432:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:501141-501366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500567-500738:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498929-499015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:498741-498848:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498505-498663:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:498343-498430:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:497299-497397:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:496142-496237:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:495962-496037:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:495779-495878:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:494920-494994:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:494693-494824:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:494453-494607:-1:exon

LOC115946117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115946117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-2 isoform X1
translation: MDWQPDEQGLQQVLQLLKDSQSPNTATQRVVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEPTRSLSGLILKNNVKAHFQSFPQPVAEFIKQECLNHIGDASSLIRATIGILITTIASKGELQMWPELLPQLCSLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNIMIPKFLQFFKHCSPKIRSHAIACVNQFIMDRAQALMENIDTFIEHLFALAVDEDPEVRKNVCRALVMLLEVRIDRLIPHMHSIIQYMLQRTQDPDENVALEACEFWLTLAEQPICKEVLTSHLVQLIPILVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIKPRFHKSRTVTLQHEEERAQDPEEAEDEDDDDTLSDWNLRKCSAAALDVLANVFREELLPHLLPLLKELLFHPEWVIKESGILVLGAIAEGCMQGMVPYLPELIPHLIRCLADKKALVRSIACWTLSRYAHWVVSQPPDMYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVTLVQKTLAQAMMYNQHPEQYEAPDKDFMIVALDLLSGLAEGLGCHVEQLVARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFVHVKPCIAEFMPILGTNLNPEFISVCNNATWAIGEICMQMGAEMQPYVQMVLNNLVEIINRPNTPKTLLENTAITIGRLGFVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPGGVVQDFIFFCDAVASWMSPKDDLRDMFYKILHGFKDQVGDENWQQFSEQFPPLLKDRLAAFYGV
SIO_010081: LOC115946117
subclass of: SO_0000673
so part of: LOC115946117
location: complement(join(494717..494824,494920..494994,495779..495878,495962..496037,496142..496237,497299..497397,498343..498430,498505..498663,498741..498848,498929..499015,500567..500738,501141..501366,503280..503432,504797..504962,506216..506276,506354..506472,507900..508022,508470..508551,509031..509164,509603..509709,509799..509948,511085..511160,511664..511762))
location: region:494717-511762:-1
so has part: feature:511664-511762:-1:exon
so has part: feature:511085-511160:-1:exon
so has part: feature:509799-509948:-1:exon
so has part: feature:509603-509709:-1:exon
so has part: feature:509031-509164:-1:exon
so has part: feature:508470-508551:-1:exon
so has part: feature:507900-508022:-1:exon
so has part: feature:506354-506472:-1:exon
so has part: feature:506216-506276:-1:exon
so has part: feature:504797-504962:-1:exon
so has part: feature:503280-503432:-1:exon
so has part: feature:501141-501366:-1:exon
so has part: feature:500567-500738:-1:exon
so has part: feature:498929-499015:-1:exon
so has part: feature:498741-498848:-1:exon
so has part: feature:498505-498663:-1:exon
so has part: feature:498343-498430:-1:exon
so has part: feature:497299-497397:-1:exon
so has part: feature:496142-496237:-1:exon
so has part: feature:495962-496037:-1:exon
so has part: feature:495779-495878:-1:exon
so has part: feature:494920-494994:-1:exon
so has part: feature:494717-494824:-1:exon

XP_033927892.1
type: Protein
SIO_000068: ncbiprotein

position:494717:-1
position: 494717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511762:-1
position: 511762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511664-511762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511085-511160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509799-509948:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:509603-509709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:509031-509164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508470-508551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507900-508022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:506354-506472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:506216-506276:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504797-504962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503280-503432:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:501141-501366:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:500567-500738:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:498929-499015:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:498741-498848:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:498505-498663:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:498343-498430:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:497299-497397:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:496142-496237:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:495962-496037:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:495779-495878:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:494920-494994:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:494717-494824:-1:exon

LOC115946117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115946117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-2 isoform X2
translation: MDRAQALMENIDTFIEHLFALAVDEDPEVRKNVCRALVMLLEVRIDRLIPHMHSIIQYMLQRTQDPDENVALEACEFWLTLAEQPICKEVLTSHLVQLIPILVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIKPRFHKSRTVTLQHEEERAQDPEEAEDEDDDDTLSDWNLRKCSAAALDVLANVFREELLPHLLPLLKELLFHPEWVIKESGILVLGAIAEGCMQGMVPYLPELIPHLIRCLADKKALVRSIACWTLSRYAHWVVSQPPDMYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVTLVQKTLAQAMMYNQHPEQYEAPDKDFMIVALDLLSGLAEGLGCHVEQLVARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFVHVKPCIAEFMPILGTNLNPEFISVCNNATWAIGEICMQMGAEMQPYVQMVLNNLVEIINRPNTPKTLLENTAITIGRLGFVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPGGVVQDFIFFCDAVASWMSPKDDLRDMFYKILHGFKDQVGDENWQQFSEQFPPLLKDRLAAFYGV
SIO_010081: LOC115946117
subclass of: SO_0000673
so part of: LOC115946117
location: complement(join(494717..494824,494920..494994,495779..495878,495962..496037,496142..496237,497299..497397,498343..498430,498505..498663,498741..498848,498929..499015,500567..500738,501141..501366,503280..503432,504797..504962,506216..506276,506354..506472,507900..508022,508470..508517))
location: region:494717-508517:-1
so has part: feature:508470-508517:-1:exon
so has part: feature:507900-508022:-1:exon
so has part: feature:506354-506472:-1:exon
so has part: feature:506216-506276:-1:exon
so has part: feature:504797-504962:-1:exon
so has part: feature:503280-503432:-1:exon
so has part: feature:501141-501366:-1:exon
so has part: feature:500567-500738:-1:exon
so has part: feature:498929-499015:-1:exon
so has part: feature:498741-498848:-1:exon
so has part: feature:498505-498663:-1:exon
so has part: feature:498343-498430:-1:exon
so has part: feature:497299-497397:-1:exon
so has part: feature:496142-496237:-1:exon
so has part: feature:495962-496037:-1:exon
so has part: feature:495779-495878:-1:exon
so has part: feature:494920-494994:-1:exon
so has part: feature:494717-494824:-1:exon

XP_033927893.1
type: Protein
SIO_000068: ncbiprotein

position:508517:-1
position: 508517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508470-508517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:507900-508022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:506354-506472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506216-506276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504797-504962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503280-503432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501141-501366:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:500567-500738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498929-499015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498741-498848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:498505-498663:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498343-498430:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:497299-497397:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:496142-496237:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:495962-496037:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:495779-495878:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:494920-494994:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:494717-494824:-1:exon

LOC115946117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115946117
product: transportin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034072004.1
SIO_010081: LOC115946117
subclass of: SO_0000673
so part of: LOC115946117
location: complement(join(501546..501792,503280..503432,504797..504962,506216..506276,506354..506472,507900..508022,508470..508551,509031..509164,509603..509709,509799..509948,511085..511160,511664..511779))
location: region:501546-511779:-1
so has part: feature:511664-511779:-1:exon
so has part: feature:511085-511160:-1:exon
so has part: feature:509799-509948:-1:exon
so has part: feature:509603-509709:-1:exon
so has part: feature:509031-509164:-1:exon
so has part: feature:508470-508551:-1:exon
so has part: feature:507900-508022:-1:exon
so has part: feature:506354-506472:-1:exon
so has part: feature:506216-506276:-1:exon
so has part: feature:504797-504962:-1:exon
so has part: feature:503280-503432:-1:exon
so has part: feature:501546-501792:-1:exon

position:501546:-1
position: 501546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511664-511779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511085-511160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509799-509948:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:509603-509709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:509031-509164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508470-508551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507900-508022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:506354-506472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:506216-506276:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504797-504962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503280-503432:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:501546-501792:-1:exon

position:501792:-1
position: 501792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115946117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115946117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-2 isoform X4
translation: MDWQPDEQGLQQVLQLLKDSQSPNTATQRVVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEPTRSLSGLILKNNVKAHFQSFPQPVAEFIKQECLNHIGDASSLIRATIGILITTIASKGELQMWPELLPQLCSLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNIMIPKFLQFFKHCSPKIRSHAIACVNQFIMDRAQALMENIDTFIEHLFALAVDEDPEVRKNVCRALVMLLEVRIDRLIPHMHSIIQYMLQRTQDPDENVALEACEFWLTLAEQPICKEVLTSHLVQLIPILVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIKPRFHKSRTVTLQHEEERAQDPEEAEDEDDDDTLSDWNLRKCSAAALDVLANVFREELLPHLLPLLKELLFHPEWVIKESGILVLGAIAEGCMQGMVPYLMMGVGVCLTVPVPTGCMQGMVPYLMMGVGVCLTVPVPTGCMQGMVP
SIO_010081: LOC115946117
subclass of: SO_0000673
so part of: LOC115946117
location: complement(join(501623..501792,503280..503432,504797..504962,506216..506276,506354..506472,507900..508022,508470..508551,509031..509164,509603..509709,509799..509948,511085..511160,511664..511762))
location: region:501623-511762:-1
so has part: feature:511664-511762:-1:exon
so has part: feature:511085-511160:-1:exon
so has part: feature:509799-509948:-1:exon
so has part: feature:509603-509709:-1:exon
so has part: feature:509031-509164:-1:exon
so has part: feature:508470-508551:-1:exon
so has part: feature:507900-508022:-1:exon
so has part: feature:506354-506472:-1:exon
so has part: feature:506216-506276:-1:exon
so has part: feature:504797-504962:-1:exon
so has part: feature:503280-503432:-1:exon
so has part: feature:501623-501792:-1:exon

XP_033927895.1
type: Protein
SIO_000068: ncbiprotein

position:501623:-1
position: 501623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511664-511762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511085-511160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509799-509948:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:509603-509709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:509031-509164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508470-508551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507900-508022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:506354-506472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:506216-506276:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504797-504962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503280-503432:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:501623-501792:-1:exon

LOC115946117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115946117
product: transportin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072003.1
SIO_010081: LOC115946117
subclass of: SO_0000673
so part of: LOC115946117
location: complement(join(501850..502366,503280..503432,504797..504962,506216..506276,506354..506472,507900..508022,508470..508551,509031..509164,509603..509709,509799..509948,511085..511160,511664..511779))
location: region:501850-511779:-1
so has part: feature:511664-511779:-1:exon
so has part: feature:511085-511160:-1:exon
so has part: feature:509799-509948:-1:exon
so has part: feature:509603-509709:-1:exon
so has part: feature:509031-509164:-1:exon
so has part: feature:508470-508551:-1:exon
so has part: feature:507900-508022:-1:exon
so has part: feature:506354-506472:-1:exon
so has part: feature:506216-506276:-1:exon
so has part: feature:504797-504962:-1:exon
so has part: feature:503280-503432:-1:exon
so has part: feature:501850-502366:-1:exon

position:501850:-1
position: 501850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511664-511779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511085-511160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509799-509948:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:509603-509709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:509031-509164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508470-508551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507900-508022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:506354-506472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:506216-506276:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504797-504962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503280-503432:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:501850-502366:-1:exon

position:502366:-1
position: 502366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115946117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115946117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-2 isoform X3
translation: MDWQPDEQGLQQVLQLLKDSQSPNTATQRVVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEPTRSLSGLILKNNVKAHFQSFPQPVAEFIKQECLNHIGDASSLIRATIGILITTIASKGELQMWPELLPQLCSLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNIMIPKFLQFFKHCSPKIRSHAIACVNQFIMDRAQALMENIDTFIEHLFALAVDEDPEVRKNVCRALVMLLEVRIDRLIPHMHSIIQYMLQRTQDPDENVALEACEFWLTLAEQPICKEVLTSHLVQLIPILVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIKPRFHKSRTVTLQHEEERAQDPEEAEDEDDDDTLSDWNLRKCSAAALDVLANVFREELLPHLLPLLKELLFHPEWVIKESGILVLGAIAEGCMQGMVPYLMMGVGVCLTVLVPTGCMQGMVPYLMMVVGVCLTVPVPTGCMQGMVP
SIO_010081: LOC115946117
subclass of: SO_0000673
so part of: LOC115946117
location: complement(join(502197..502366,503280..503432,504797..504962,506216..506276,506354..506472,507900..508022,508470..508551,509031..509164,509603..509709,509799..509948,511085..511160,511664..511762))
location: region:502197-511762:-1
so has part: feature:511664-511762:-1:exon
so has part: feature:511085-511160:-1:exon
so has part: feature:509799-509948:-1:exon
so has part: feature:509603-509709:-1:exon
so has part: feature:509031-509164:-1:exon
so has part: feature:508470-508551:-1:exon
so has part: feature:507900-508022:-1:exon
so has part: feature:506354-506472:-1:exon
so has part: feature:506216-506276:-1:exon
so has part: feature:504797-504962:-1:exon
so has part: feature:503280-503432:-1:exon
so has part: feature:502197-502366:-1:exon

XP_033927894.1
type: Protein
SIO_000068: ncbiprotein

position:502197:-1
position: 502197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511664-511762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511085-511160:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509799-509948:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:509603-509709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:509031-509164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508470-508551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507900-508022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:506354-506472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:506216-506276:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504797-504962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503280-503432:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:502197-502366:-1:exon

LOC115946233
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115946233
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(505029..505095)
location: region:505029-505095:-1
so has part: feature:505029-505095:-1:exon
subclass of: SO_0000578

115946233
type: Gene
SIO_000068: ncbigene

position:505029:-1
position: 505029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505095:-1
position: 505095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505029-505095:-1:exon

LOC115946233
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: snoRNA
gene: LOC115946233
product: small nucleolar RNA SNORD41
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00588
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004080327.1
SIO_010081: LOC115946233
subclass of: SO_0000673
so part of: LOC115946233
location: complement(505029..505095)
location: region:505029-505095:-1
so has part: feature:505029-505095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505029-505095:-1:exon

LOC117437543
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516011..519102)
location: region:516011-519102:-1
so has part: feature:516011-519102:-1:exon
subclass of: SO_0000010

117437543
type: Gene
SIO_000068: ncbigene

position:516011:-1
position: 516011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519102:-1
position: 519102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516011-519102:-1:exon

LOC117437543
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437543
product: telomerase RNA component interacting RNase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072006.1
SIO_010081: LOC117437543
subclass of: SO_0000673
so part of: LOC117437543
location: complement(join(516011..516132,517714..517791,518769..519102))
location: region:516011-519102:-1
so has part: feature:518769-519102:-1:exon
so has part: feature:517714-517791:-1:exon
so has part: feature:516011-516132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518769-519102:-1:exon

position:518769:-1
position: 518769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:517714-517791:-1:exon

position:517714:-1
position: 517714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517791:-1
position: 517791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516011-516132:-1:exon

position:516132:-1
position: 516132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437543
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase RNA component interacting RNase
translation: MAAHGEDGEAPEAPSPPPGPGGGVNVFANDGSFLELFKRKMEAEREREREREREREREREAAEAEQGPGPRPPDGAKRSGGQLSFVGRRRGGNKLALKTGVVAKKQRTDEEVLTSKGDAWAKYMAEVKKYKAHQCSDDDKTRPLVK
SIO_010081: LOC117437543
subclass of: SO_0000673
so part of: LOC117437543
location: complement(join(516025..516132,517714..517791,518769..519023))
location: region:516025-519023:-1
so has part: feature:518769-519023:-1:exon
so has part: feature:517714-517791:-1:exon
so has part: feature:516025-516132:-1:exon

XP_033927897.1
type: Protein
SIO_000068: ncbiprotein

position:516025:-1
position: 516025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519023:-1
position: 519023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518769-519023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517714-517791:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516025-516132:-1:exon

LOC117437579
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 519072..520632
location: region:519072-520632:1
so has part: feature:519072-520632:1:exon
subclass of: SO_0000010

117437579
type: Gene
SIO_000068: ncbigene

position:519072:1
position: 519072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520632:1
position: 520632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519072-520632:1:exon

LOC117437579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437579
product: lysosomal alpha-mannosidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072084.1
SIO_010081: LOC117437579
subclass of: SO_0000673
so part of: LOC117437579
location: join(519072..519077,519274..519498,520291..520393,520474..520632)
location: region:519072-520632:1
so has part: feature:519072-519077:1:exon
so has part: feature:519274-519498:1:exon
so has part: feature:520291-520393:1:exon
so has part: feature:520474-520632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519072-519077:1:exon

position:519077:1
position: 519077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519274-519498:1:exon

position:519274:1
position: 519274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519498:1
position: 519498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520291-520393:1:exon

position:520291:1
position: 520291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520393:1
position: 520393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:520474-520632:1:exon

position:520474:1
position: 520474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal alpha-mannosidase-like
translation: MTPRGGGAKRRRSANERQGGAEREDGGRRRVRAGAGAVRGRSRCGTVGTNVGECGGTEESEVDLRGGEGRSGEDNVQDLFSAFTITSVQEMNLGGFQPLDAISRLVWTPTTGPSQSKPVTKLDPRRVTLQPMDIRTFLVHYEGPGAAHGGL
SIO_010081: LOC117437579
subclass of: SO_0000673
so part of: LOC117437579
location: join(519072..519077,519274..519498,520291..520393,520474..520595)
location: region:519072-520595:1
so has part: feature:519072-519077:1:exon
so has part: feature:519274-519498:1:exon
so has part: feature:520291-520393:1:exon
so has part: feature:520474-520595:1:exon

XP_033927975.1
type: Protein
SIO_000068: ncbiprotein

position:520595:1
position: 520595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519072-519077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519274-519498:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520291-520393:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:520474-520595:1:exon

LOC115945844
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(520481..>530524)
location: region:520481-530524:-1
so has part: feature:520481-530524:-1:exon
subclass of: SO_0000010

115945844
type: Gene
SIO_000068: ncbigene

position:520481:-1
position: 520481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530524:-1
position: 530524
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520481-530524:-1:exon

LOC115945844
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945844
product: tRNA methyltransferase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034072085.1
SIO_010081: LOC115945844
subclass of: SO_0000673
so part of: LOC115945844
location: complement(join(520481..520749,521179..521278,522191..522310,522404..522480,523053..523161,524019..524104,524195..524329,524403..524472,524953..525036,525116..525264,525339..525451,526450..526565,527115..527302,528560..528709,528952..529007,530385..>530524))
location: region:520481-530524:-1
so has part: feature:530385-530524:-1:exon
so has part: feature:528952-529007:-1:exon
so has part: feature:528560-528709:-1:exon
so has part: feature:527115-527302:-1:exon
so has part: feature:526450-526565:-1:exon
so has part: feature:525339-525451:-1:exon
so has part: feature:525116-525264:-1:exon
so has part: feature:524953-525036:-1:exon
so has part: feature:524403-524472:-1:exon
so has part: feature:524195-524329:-1:exon
so has part: feature:524019-524104:-1:exon
so has part: feature:523053-523161:-1:exon
so has part: feature:522404-522480:-1:exon
so has part: feature:522191-522310:-1:exon
so has part: feature:521179-521278:-1:exon
so has part: feature:520481-520749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:530385-530524:-1:exon

position:530385:-1
position: 530385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528952-529007:-1:exon

position:528952:-1
position: 528952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529007:-1
position: 529007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:528560-528709:-1:exon

position:528560:-1
position: 528560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528709:-1
position: 528709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:527115-527302:-1:exon

position:527115:-1
position: 527115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527302:-1
position: 527302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:526450-526565:-1:exon

position:526450:-1
position: 526450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526565:-1
position: 526565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:525339-525451:-1:exon

position:525339:-1
position: 525339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525451:-1
position: 525451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:525116-525264:-1:exon

position:525116:-1
position: 525116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525264:-1
position: 525264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:524953-525036:-1:exon

position:524953:-1
position: 524953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525036:-1
position: 525036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:524403-524472:-1:exon

position:524403:-1
position: 524403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524472:-1
position: 524472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:524195-524329:-1:exon

position:524195:-1
position: 524195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524329:-1
position: 524329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:524019-524104:-1:exon

position:524019:-1
position: 524019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524104:-1
position: 524104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:523053-523161:-1:exon

position:523053:-1
position: 523053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523161:-1
position: 523161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:522404-522480:-1:exon

position:522404:-1
position: 522404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522480:-1
position: 522480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:522191-522310:-1:exon

position:522191:-1
position: 522191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522310:-1
position: 522310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:521179-521278:-1:exon

position:521179:-1
position: 521179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521278:-1
position: 521278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:520481-520749:-1:exon

position:520749:-1
position: 520749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115945844
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945844
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: tRNA (guanine(26)-N(2))-dimethyltransferase
translation: PVPPPVGSGAPPGSGEGLITEGRATILFPKANEVFYNPVQVFNRDMTCAVLTEFARLFLQAKGIQVVTPGEENTDAGSAQPPDEDDDGDDGAVMVPVPVPTPPPPRVAKAGQPCEGGLRVLEALAASGLRSIRFAKEVPGLRSVVANDCSALATDLIGRNVDFNGVGALVTPSMADARMLMYQCKANRDPFDVIDLDPYGSPAPFIDAAVQAVSEGGLLCVTCTDMGVLAGNNPETSYSKYGSVSLKGKFCHEMALRIILHSLDNRANCYQRFIVPLVSISADFYIRVYVRVFTGQAKVKASASKQALVYQCVGCGTHHLQRMGRATAHGNGFKYGAAMGPPVGPTCEFCHQRHQMGGPIWAEPLHDLPFVQRILGALERSPHRFQTQERMQGVLSAITEELSDVPLYYTLEGLSSIVHCNTPSLLQFSSALLHAGYRVSLSHACRTAVKTDAPPAVLWDILRCWVRLHPVKRERLTDPSPAARILSVEPTLQASFAIRADANPSSRKRGLKRFPENPEAFWGPKAKAKAGGSLSPSLKGKRNKRRQQQQGTDLSPPPCKWHKEGLCVQDGEPPIAPPIPDPTSCPH
SIO_010081: LOC115945844
subclass of: SO_0000673
so part of: LOC115945844
location: complement(join(520678..520749,521179..521278,522191..522310,522404..522480,523053..523161,524019..524104,524195..524329,524403..524472,524953..525036,525116..525264,525339..525451,526450..526565,527115..527302,528560..528709,528952..529007,530385..>530524))
location: region:520678-530524:-1
so has part: feature:530385-530524:-1:exon
so has part: feature:528952-529007:-1:exon
so has part: feature:528560-528709:-1:exon
so has part: feature:527115-527302:-1:exon
so has part: feature:526450-526565:-1:exon
so has part: feature:525339-525451:-1:exon
so has part: feature:525116-525264:-1:exon
so has part: feature:524953-525036:-1:exon
so has part: feature:524403-524472:-1:exon
so has part: feature:524195-524329:-1:exon
so has part: feature:524019-524104:-1:exon
so has part: feature:523053-523161:-1:exon
so has part: feature:522404-522480:-1:exon
so has part: feature:522191-522310:-1:exon
so has part: feature:521179-521278:-1:exon
so has part: feature:520678-520749:-1:exon

XP_033927976.1
type: Protein
SIO_000068: ncbiprotein

position:520678:-1
position: 520678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530385-530524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528952-529007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528560-528709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527115-527302:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526450-526565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:525339-525451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:525116-525264:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524953-525036:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524403-524472:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524195-524329:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:524019-524104:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523053-523161:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:522404-522480:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:522191-522310:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:521179-521278:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:520678-520749:-1:exon

LOC101867901
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101867901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 531200..538509
location: region:531200-538509:1
so has part: feature:531200-538509:1:exon
subclass of: SO_0000010

101867901
type: Gene
SIO_000068: ncbigene

position:531200:1
position: 531200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538509:1
position: 538509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531200-538509:1:exon

LOC101867901
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101867901
product: nucleus accumbens associated 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071964.1
SIO_010081: LOC101867901
subclass of: SO_0000673
so part of: LOC101867901
location: join(531200..531268,533449..534362,535240..535416,536243..536348,536826..536923,537595..538509)
location: region:531200-538509:1
so has part: feature:531200-531268:1:exon
so has part: feature:533449-534362:1:exon
so has part: feature:535240-535416:1:exon
so has part: feature:536243-536348:1:exon
so has part: feature:536826-536923:1:exon
so has part: feature:537595-538509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531200-531268:1:exon

position:531268:1
position: 531268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:533449-534362:1:exon

position:533449:1
position: 533449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534362:1
position: 534362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:535240-535416:1:exon

position:535240:1
position: 535240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535416:1
position: 535416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:536243-536348:1:exon

position:536243:1
position: 536243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536348:1
position: 536348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:536826-536923:1:exon

position:536826:1
position: 536826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536923:1
position: 536923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:537595-538509:1:exon

position:537595:1
position: 537595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101867901
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC101867901
product: nucleus accumbens associated 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004550465.1
SIO_010081: LOC101867901
so part of: LOC101867901
location: join(531200..531268,533449..534362,535240..535416,536243..536348,536826..536923,537595..538098,538196..538509)
location: region:531200-538509:1
so has part: feature:531200-531268:1:exon
so has part: feature:533449-534362:1:exon
so has part: feature:535240-535416:1:exon
so has part: feature:536243-536348:1:exon
so has part: feature:536826-536923:1:exon
so has part: feature:537595-538098:1:exon
so has part: feature:538196-538509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531200-531268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533449-534362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535240-535416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536243-536348:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536826-536923:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537595-538098:1:exon

position:538098:1
position: 538098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:538196-538509:1:exon

position:538196:1
position: 538196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101867901
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101867901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleus accumbens-associated protein 1
translation: MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNTSKSAVVELPAAVQPQSFQQILSFCYTGRLSMNMGDQFLLMYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHSEEAPSSEPQSPVAQTSAWSSGTAALPLVSRVKTEQGEPDGVQCTFVVKRLWDGGAKDGGGATTGGNGSRKMAKFSAPEPGRQQQPATPTTAPVVPVVPVAPGPSAADQTSPGGTSSAYTSDSPGSFHNEEDEEEDGGEEGSDEQYRQICNMYTMYSMMNVGLAAAEKVEALPDQGTSEPRTRVRVRQDLASLPAELINQIGNRCHPKLYDEGDPAEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGIRSSTNDPRRKPLDSRVLHAVKFYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWIPKLKLLSAEGDSYTSFINEAGKLEPDIMGPEPGFDASAHEGEAGAPGEGLQ
SIO_010081: LOC101867901
subclass of: SO_0000673
so part of: LOC101867901
location: join(533468..534362,535240..535416,536243..536348,536826..536923,537595..537854)
location: region:533468-537854:1
so has part: feature:533468-534362:1:exon
so has part: feature:535240-535416:1:exon
so has part: feature:536243-536348:1:exon
so has part: feature:536826-536923:1:exon
so has part: feature:537595-537854:1:exon

XP_033927855.1
type: Protein
SIO_000068: ncbiprotein

position:533468:1
position: 533468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537854:1
position: 537854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533468-534362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535240-535416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536243-536348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536826-536923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537595-537854:1:exon

LOC115945703
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115945703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(543154..594213)
location: region:543154-594213:-1
so has part: feature:543154-594213:-1:exon
subclass of: SO_0000010

115945703
type: Gene
SIO_000068: ncbigene

position:543154:-1
position: 543154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594213:-1
position: 594213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543154-594213:-1:exon

LOC115945703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945703
product: calcium voltage-gated channel subunit alpha1 A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072072.1
SIO_010081: LOC115945703
subclass of: SO_0000673
so part of: LOC115945703
location: complement(join(543154..543574,546972..547225,547729..547924,551545..551580,552535..552645,552756..552888,552966..553057,554282..554382,554930..555037,555977..556082,557426..557522,560396..560523,563040..563190,564671..564771,565318..565383,565472..565588,565665..565748,567651..567761,569176..569340,570767..570968,572108..572248,572338..572498,572575..572674,574191..574297,574380..574439,574669..574798,574873..575014,575450..575817,576272..576961,578277..578383,578467..578534,578624..578741,579387..579459,579612..579743,579848..579960,580411..580523,581466..581675,582426..582515,582640..582696,583862..583977,584060..584163,585037..585224,585850..586002,586231..586322,588313..588452,589060..589165,593839..594213))
location: region:543154-594213:-1
so has part: feature:593839-594213:-1:exon
so has part: feature:589060-589165:-1:exon
so has part: feature:588313-588452:-1:exon
so has part: feature:586231-586322:-1:exon
so has part: feature:585850-586002:-1:exon
so has part: feature:585037-585224:-1:exon
so has part: feature:584060-584163:-1:exon
so has part: feature:583862-583977:-1:exon
so has part: feature:582640-582696:-1:exon
so has part: feature:582426-582515:-1:exon
so has part: feature:581466-581675:-1:exon
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SIO_000300: 21
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SIO_000300: 23
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SIO_000300: 24
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SIO_000300: 30
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SIO_000300: 31
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SIO_000300: 34
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SIO_000300: 35
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SIO_000300: 36
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SIO_000300: 46
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SIO_000300: 47
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LOC115945703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115945703
product: calcium voltage-gated channel subunit alpha1 A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 32 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072071.1
SIO_010081: LOC115945703
subclass of: SO_0000673
so part of: LOC115945703
location: complement(join(543154..543574,546972..547225,547729..547924,551545..551580,552535..552645,552756..552888,552966..553057,554282..554382,554930..555037,555977..556082,559084..559180,560396..560523,563040..563190,564671..564771,565318..565383,565472..565588,565665..565748,567651..567761,569176..569340,570767..570968,572108..572248,572338..572498,572575..572674,574191..574297,574380..574439,574669..574798,574873..575014,575450..575817,576272..576961,578277..578383,578467..578534,578624..578741,579387..579459,579612..579743,579848..579960,580411..580523,581466..581675,582426..582515,582640..582696,583862..583977,584060..584163,585037..585224,585850..586002,586231..586322,588313..588452,589060..589165,593839..594213))
location: region:543154-594213:-1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
SIO_000628: feature:565665-565748:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:565472-565588:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:565318-565383:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:564671-564771:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:563040-563190:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:560396-560523:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:559084-559180:-1:exon

position:559084:-1
position: 559084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559180:-1
position: 559180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:555977-556082:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:554930-555037:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:554282-554382:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:552966-553057:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:552756-552888:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:552535-552645:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:551545-551580:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:547729-547924:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:546972-547225:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:543154-543574:-1:exon

LOC115945703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X2
translation: MARFGDELPVPARYGAGGGGGGPGASASPSVVGGGGRGGRQGGPPGAQRMYKQSMAQRARTMALYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKFHTTCFDLVTDEIKVEVPCGMDEPARICPNGTKCKKYWEGPNYGITQFDNILFAVLTVFQCITMEGWTDLLYYSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDDPEGEPRHPFDALRRATIKKSKTDLLSPEDAEEQLADIASVGSPFARASLKSAKLENVTFFHKRERRMRFHIRRMVKTQAFYWTVLSLVALNTLCVAIVHYDQPDWLSDFLYYAEFIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPPTNFDTFPAAIMTVFQILTGEDWNAVMYDGIKSQGGVKGGMVFSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAANQKLALQKVKEVAEVSPLSAANMSVTMKEQHKNQKASRSVWEQRTSELRKQNLLASREALYSELEPEERWKLPYGRHMKTHMDRPLVVDPHDNRNNNTNRTRPPEPDPRLGQLRAGELRRPPRCPDPGGVPTAVPVPPVPSSSGVRRGRDPHGDPSPERLKAMERRHRTSGGRSGSPQPEREHRRHRGHRRAAEEGEDGGRTERRLRHRDGSRPVRGDGDGEHGEGERRRRHRHGPGGGMDGEGRREDKERRHRRRRENQVPPVPSGPTLSTTRPIQQDVGRRDPPVAEDIDNMKNNKLVTADPPVPPPMGNHSSCPTGVPLRRPPQTSTTTNPTPDTNLVVTNPNTHNNPAKGGGKPEHTAVDIPPPLPPPPSSALVQVNRNANPEPLPRKEEEQEKKDEGDDQDENGPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMVDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGSSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFEKDCRGEYLVYEKDNEVKAQKREWKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNRQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFYDASDAYEYVLKMFNNVFTSLFSLECLLKIMAFGVLNYFRDAWNVFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIEEEDDESAITQHNNFRTFFQALMLLFRSATGEAWHEIMLSCLSGKPCDHNSGIREHECGNEFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRLTFMDMYEMLRHMSPPLGLGKKCPPRVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDAELRKEMVAIWPNLSPKNLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQNRTPLMFQRMEPPSPTQEGAPGPDTGPGSEPATRDGGLKESPSWVTQRAQEMFQKTGTWSPEHPEDVPNARPSSQLVEMRDMAKDGYSDSEYLP…
SIO_010081: LOC115945703
subclass of: SO_0000673
so part of: LOC115945703
location: complement(join(543185..543574,546972..547225,547729..547924,551545..551580,552535..552645,552756..552888,552966..553057,554282..554382,554930..555037,555977..556082,557426..557522,560396..560523,563040..563190,564671..564771,565318..565383,565472..565588,565665..565748,567651..567761,569176..569340,570767..570968,572108..572248,572338..572498,572575..572674,574191..574297,574380..574439,574669..574798,574873..575014,575450..575817,576272..576961,578277..578383,578467..578534,578624..578741,579387..579459,579612..579743,579848..579960,580411..580523,581466..581675,582426..582515,582640..582696,583862..583977,584060..584163,585037..585224,585850..586002,586231..586322,588313..588452,589060..589165,593839..594140))
location: region:543185-594140:-1
so has part: feature:593839-594140:-1:exon
so has part: feature:589060-589165:-1:exon
so has part: feature:588313-588452:-1:exon
so has part: feature:586231-586322:-1:exon
so has part: feature:585850-586002:-1:exon
so has part: feature:585037-585224:-1:exon
so has part: feature:584060-584163:-1:exon
so has part: feature:583862-583977:-1:exon
so has part: feature:582640-582696:-1:exon
so has part: feature:582426-582515:-1:exon
so has part: feature:581466-581675:-1:exon
so has part: feature:580411-580523:-1:exon
so has part: feature:579848-579960:-1:exon
so has part: feature:579612-579743:-1:exon
so has part: feature:579387-579459:-1:exon
so has part: feature:578624-578741:-1:exon
so has part: feature:578467-578534:-1:exon
so has part: feature:578277-578383:-1:exon
so has part: feature:576272-576961:-1:exon
so has part: feature:575450-575817:-1:exon
so has part: feature:574873-575014:-1:exon
so has part: feature:574669-574798:-1:exon
so has part: feature:574380-574439:-1:exon
so has part: feature:574191-574297:-1:exon
so has part: feature:572575-572674:-1:exon
so has part: feature:572338-572498:-1:exon
so has part: feature:572108-572248:-1:exon
so has part: feature:570767-570968:-1:exon
so has part: feature:569176-569340:-1:exon
so has part: feature:567651-567761:-1:exon
so has part: feature:565665-565748:-1:exon
so has part: feature:565472-565588:-1:exon
so has part: feature:565318-565383:-1:exon
so has part: feature:564671-564771:-1:exon
so has part: feature:563040-563190:-1:exon
so has part: feature:560396-560523:-1:exon
so has part: feature:557426-557522:-1:exon
so has part: feature:555977-556082:-1:exon
so has part: feature:554930-555037:-1:exon
so has part: feature:554282-554382:-1:exon
so has part: feature:552966-553057:-1:exon
so has part: feature:552756-552888:-1:exon
so has part: feature:552535-552645:-1:exon
so has part: feature:551545-551580:-1:exon
so has part: feature:547729-547924:-1:exon
so has part: feature:546972-547225:-1:exon
so has part: feature:543185-543574:-1:exon

XP_033927963.1
type: Protein
SIO_000068: ncbiprotein

position:543185:-1
position: 543185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594140:-1
position: 594140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593839-594140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589060-589165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588313-588452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:586231-586322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585850-586002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:585037-585224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584060-584163:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:583862-583977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:582640-582696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:582426-582515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:581466-581675:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:580411-580523:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:579848-579960:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:579612-579743:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:579387-579459:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:578624-578741:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:578467-578534:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:578277-578383:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:576272-576961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:575450-575817:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:574873-575014:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:574669-574798:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:574380-574439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:574191-574297:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:572575-572674:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:572338-572498:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:572108-572248:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:570767-570968:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:569176-569340:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:567651-567761:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:565665-565748:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:565472-565588:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:565318-565383:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:564671-564771:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:563040-563190:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:560396-560523:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:557426-557522:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:555977-556082:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:554930-555037:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:554282-554382:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:552966-553057:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:552756-552888:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:552535-552645:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:551545-551580:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:547729-547924:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:546972-547225:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:543185-543574:-1:exon

LOC115945703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115945703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
translation: MARFGDELPVPARYGAGGGGGGPGASASPSVVGGGGRGGRQGGPPGAQRMYKQSMAQRARTMALYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKFHTTCFDLVTDEIKVEVPCGMDEPARICPNGTKCKKYWEGPNYGITQFDNILFAVLTVFQCITMEGWTDLLYYSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDDPEGEPRHPFDALRRATIKKSKTDLLSPEDAEEQLADIASVGSPFARASLKSAKLENVTFFHKRERRMRFHIRRMVKTQAFYWTVLSLVALNTLCVAIVHYDQPDWLSDFLYYAEFIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPPTNFDTFPAAIMTVFQILTGEDWNAVMYDGIKSQGGVKGGMVFSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAANQKLALQKVKEVAEVSPLSAANMSVTMKEQHKNQKASRSVWEQRTSELRKQNLLASREALYSELEPEERWKLPYGRHMKTHMDRPLVVDPHDNRNNNTNRTRPPEPDPRLGQLRAGELRRPPRCPDPGGVPTAVPVPPVPSSSGVRRGRDPHGDPSPERLKAMERRHRTSGGRSGSPQPEREHRRHRGHRRAAEEGEDGGRTERRLRHRDGSRPVRGDGDGEHGEGERRRRHRHGPGGGMDGEGRREDKERRHRRRRENQVPPVPSGPTLSTTRPIQQDVGRRDPPVAEDIDNMKNNKLVTADPPVPPPMGNHSSCPTGVPLRRPPQTSTTTNPTPDTNLVVTNPNTHNNPAKGGGKPEHTAVDIPPPLPPPPSSALVQVNRNANPEPLPRKEEEQEKKDEGDDQDENGPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMVDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGSSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFEKDCRGEYLVYEKDNEVKAQKREWKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNRQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFYDASDAYEYVLKMFNNVFTSLFSLECLLKIMAFGVLNYFRDAWNVFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIEEEDDESAITQHNNFRTFFQALMLLFRSATGEAWHEIMLSCLSGKPCDHNSGIREHECGNEFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDAELRKEMVAIWPNLSPKNLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQNRTPLMFQRMEPPSPTQEGAPGPDTGPGSEPATRDGGLKESPSWVTQRAQEMFQKTGTWSPEHPEDVPNARPSSQLVEMRDMAKDGYSDSEYLP…
SIO_010081: LOC115945703
subclass of: SO_0000673
so part of: LOC115945703
location: complement(join(543185..543574,546972..547225,547729..547924,551545..551580,552535..552645,552756..552888,552966..553057,554282..554382,554930..555037,555977..556082,559084..559180,560396..560523,563040..563190,564671..564771,565318..565383,565472..565588,565665..565748,567651..567761,569176..569340,570767..570968,572108..572248,572338..572498,572575..572674,574191..574297,574380..574439,574669..574798,574873..575014,575450..575817,576272..576961,578277..578383,578467..578534,578624..578741,579387..579459,579612..579743,579848..579960,580411..580523,581466..581675,582426..582515,582640..582696,583862..583977,584060..584163,585037..585224,585850..586002,586231..586322,588313..588452,589060..589165,593839..594140))
location: region:543185-594140:-1
so has part: feature:593839-594140:-1:exon
so has part: feature:589060-589165:-1:exon
so has part: feature:588313-588452:-1:exon
so has part: feature:586231-586322:-1:exon
so has part: feature:585850-586002:-1:exon
so has part: feature:585037-585224:-1:exon
so has part: feature:584060-584163:-1:exon
so has part: feature:583862-583977:-1:exon
so has part: feature:582640-582696:-1:exon
so has part: feature:582426-582515:-1:exon
so has part: feature:581466-581675:-1:exon
so has part: feature:580411-580523:-1:exon
so has part: feature:579848-579960:-1:exon
so has part: feature:579612-579743:-1:exon
so has part: feature:579387-579459:-1:exon
so has part: feature:578624-578741:-1:exon
so has part: feature:578467-578534:-1:exon
so has part: feature:578277-578383:-1:exon
so has part: feature:576272-576961:-1:exon
so has part: feature:575450-575817:-1:exon
so has part: feature:574873-575014:-1:exon
so has part: feature:574669-574798:-1:exon
so has part: feature:574380-574439:-1:exon
so has part: feature:574191-574297:-1:exon
so has part: feature:572575-572674:-1:exon
so has part: feature:572338-572498:-1:exon
so has part: feature:572108-572248:-1:exon
so has part: feature:570767-570968:-1:exon
so has part: feature:569176-569340:-1:exon
so has part: feature:567651-567761:-1:exon
so has part: feature:565665-565748:-1:exon
so has part: feature:565472-565588:-1:exon
so has part: feature:565318-565383:-1:exon
so has part: feature:564671-564771:-1:exon
so has part: feature:563040-563190:-1:exon
so has part: feature:560396-560523:-1:exon
so has part: feature:559084-559180:-1:exon
so has part: feature:555977-556082:-1:exon
so has part: feature:554930-555037:-1:exon
so has part: feature:554282-554382:-1:exon
so has part: feature:552966-553057:-1:exon
so has part: feature:552756-552888:-1:exon
so has part: feature:552535-552645:-1:exon
so has part: feature:551545-551580:-1:exon
so has part: feature:547729-547924:-1:exon
so has part: feature:546972-547225:-1:exon
so has part: feature:543185-543574:-1:exon

XP_033927962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593839-594140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589060-589165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:588313-588452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:586231-586322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585850-586002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:585037-585224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:584060-584163:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:583862-583977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:582640-582696:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:582426-582515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:581466-581675:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:580411-580523:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:579848-579960:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:579612-579743:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:579387-579459:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:578624-578741:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:578467-578534:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:578277-578383:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:576272-576961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:575450-575817:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:574873-575014:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:574669-574798:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:574380-574439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:574191-574297:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:572575-572674:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:572338-572498:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:572108-572248:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:570767-570968:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:569176-569340:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:567651-567761:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:565665-565748:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:565472-565588:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:565318-565383:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:564671-564771:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:563040-563190:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:560396-560523:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:559084-559180:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:555977-556082:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:554930-555037:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:554282-554382:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:552966-553057:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:552756-552888:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:552535-552645:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:551545-551580:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:547729-547924:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:546972-547225:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:543185-543574:-1:exon

LOC117437540
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 599046..606333
location: region:599046-606333:1
so has part: feature:599046-606333:1:exon
subclass of: SO_0000010

117437540
type: Gene
SIO_000068: ncbigene

position:599046:1
position: 599046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606333:1
position: 606333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599046-606333:1:exon

LOC117437540
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437540
product: coiled-coil domain containing 130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071987.1
SIO_010081: LOC117437540
subclass of: SO_0000673
so part of: LOC117437540
location: join(599046..599088,600555..600613,600891..600944,601035..601117,601200..601255,601330..601390,603027..603169,604337..604509,605222..605333,606044..606333)
location: region:599046-606333:1
so has part: feature:599046-599088:1:exon
so has part: feature:600555-600613:1:exon
so has part: feature:600891-600944:1:exon
so has part: feature:601035-601117:1:exon
so has part: feature:601200-601255:1:exon
so has part: feature:601330-601390:1:exon
so has part: feature:603027-603169:1:exon
so has part: feature:604337-604509:1:exon
so has part: feature:605222-605333:1:exon
so has part: feature:606044-606333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:599046-599088:1:exon

position:599088:1
position: 599088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600555-600613:1:exon

position:600555:1
position: 600555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600613:1
position: 600613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:600891-600944:1:exon

position:600891:1
position: 600891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600944:1
position: 600944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:601035-601117:1:exon

position:601035:1
position: 601035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601117:1
position: 601117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:601200-601255:1:exon

position:601200:1
position: 601200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601255:1
position: 601255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:601330-601390:1:exon

position:601330:1
position: 601330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601390:1
position: 601390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:603027-603169:1:exon

position:603027:1
position: 603027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603169:1
position: 603169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:604337-604509:1:exon

position:604337:1
position: 604337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604509:1
position: 604509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:605222-605333:1:exon

position:605222:1
position: 605222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605333:1
position: 605333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:606044-606333:1:exon

position:606044:1
position: 606044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 130
translation: MGERKGTNKYYPPDFDPAKHRSLNKYHGSHPLRERARKLAQGILVIRFEMPFNIWCDGCKNHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNHIELQTDPAGCDYVIVSGARRKEERWDMAENQQVLPTEPEARERLASDAMFRLEHGAKDREYRERAAPGLAALQHFQSLWKDDFGINCRLRSHFREQKPPRDEPCPALGISLLPEEPQDRRVAALMALQAPLSYEARQQQKRTEISSRPWFTGDPPRKPCGGGGVGGARTPPPTRSTLGIIRRGDPPPAGPRGGAGQGGGPQSPPTTSLVADYSDSSSDGS
SIO_010081: LOC117437540
subclass of: SO_0000673
so part of: LOC117437540
location: join(600611..600613,600891..600944,601035..601117,601200..601255,601330..601390,603027..603169,604337..604509,605222..605333,606044..606312)
location: region:600611-606312:1
so has part: feature:600611-600613:1:exon
so has part: feature:600891-600944:1:exon
so has part: feature:601035-601117:1:exon
so has part: feature:601200-601255:1:exon
so has part: feature:601330-601390:1:exon
so has part: feature:603027-603169:1:exon
so has part: feature:604337-604509:1:exon
so has part: feature:605222-605333:1:exon
so has part: feature:606044-606312:1:exon

XP_033927878.1
type: Protein
SIO_000068: ncbiprotein

position:600611:1
position: 600611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606312:1
position: 606312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600611-600613:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:600891-600944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601035-601117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:601200-601255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601330-601390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603027-603169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604337-604509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605222-605333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:606044-606312:1:exon

LOC117437534
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 606809..611134
location: region:606809-611134:1
so has part: feature:606809-611134:1:exon
subclass of: SO_0000010

117437534
type: Gene
SIO_000068: ncbigene

position:606809:1
position: 606809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611134:1
position: 611134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606809-611134:1:exon

LOC117437534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437534
product: methylthioribose-1-phosphate isomerase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034071973.1
SIO_010081: LOC117437534
subclass of: SO_0000673
so part of: LOC117437534
location: join(606809..606980,607621..607739,607788..608216,608758..608930,609129..609305,609900..610124,610976..611134)
location: region:606809-611134:1
so has part: feature:606809-606980:1:exon
so has part: feature:607621-607739:1:exon
so has part: feature:607788-608216:1:exon
so has part: feature:608758-608930:1:exon
so has part: feature:609129-609305:1:exon
so has part: feature:609900-610124:1:exon
so has part: feature:610976-611134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:606809-606980:1:exon

position:606980:1
position: 606980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:607621-607739:1:exon

position:607621:1
position: 607621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607739:1
position: 607739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:607788-608216:1:exon

position:607788:1
position: 607788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608216:1
position: 608216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:608758-608930:1:exon

position:608758:1
position: 608758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608930:1
position: 608930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:609129-609305:1:exon

position:609129:1
position: 609129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609305:1
position: 609305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:609900-610124:1:exon

position:609900:1
position: 609900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610124:1
position: 610124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:610976-611134:1:exon

position:610976:1
position: 610976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437534
product: methylthioribose-1-phosphate isomerase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034071974.1
SIO_010081: LOC117437534
subclass of: SO_0000673
so part of: LOC117437534
location: join(606809..606980,607621..607739,607788..607993,608030..608216,608758..608930,609129..609305,609900..610124,610976..611134)
location: region:606809-611134:1
so has part: feature:606809-606980:1:exon
so has part: feature:607621-607739:1:exon
so has part: feature:607788-607993:1:exon
so has part: feature:608030-608216:1:exon
so has part: feature:608758-608930:1:exon
so has part: feature:609129-609305:1:exon
so has part: feature:609900-610124:1:exon
so has part: feature:610976-611134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:606809-606980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:607621-607739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607788-607993:1:exon

position:607993:1
position: 607993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:608030-608216:1:exon

position:608030:1
position: 608030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:608758-608930:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609129-609305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609900-610124:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610976-611134:1:exon

LOC117437534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylthioribose-1-phosphate isomerase isoform X1
translation: MALESIRYRRGSLSVLNQLLLPERIRYERVGGAERAWTVINSMEVRGAPAIALVACLSLAVELATGADAGAGTGGDGDAGTGAAGGTGAGGDVGGDANAGAGGDADAGADTSTGAGVGAGTDGDAGTGTSTGVGVDAGTGTGVGAGTGTDGDAGTGTSADAGGDTGTGPSPGAEVAALEAFVQQRLRFLLTARPTAVNLLREAERLQELIRGWSRSPGITAPELRERIIEHIEGLLAKDRQDNESIGAYGAQDILRRVPPGATVTILTHCNTGSLATAGYGTALGIVRTLHAQGRLRRVLCTETRPYNQGSRLTAFELCHDHIPVTLIADSAAAAAMGEHRVDAVLVGADRVAANGDTANKIGTLALALAARHNRIPFYVAAPTSSLDPMVPNGSLIPMEERPGRELTHLQGLCLAPPGIDVWNPAFDVTPHDLITGGVVTERGVFPPGDVTRALSACAARGQ
SIO_010081: LOC117437534
subclass of: SO_0000673
so part of: LOC117437534
location: join(606849..606980,607621..607739,607788..608216,608758..608930,609129..609305,609900..610124,610976..611112)
location: region:606849-611112:1
so has part: feature:606849-606980:1:exon
so has part: feature:607621-607739:1:exon
so has part: feature:607788-608216:1:exon
so has part: feature:608758-608930:1:exon
so has part: feature:609129-609305:1:exon
so has part: feature:609900-610124:1:exon
so has part: feature:610976-611112:1:exon

XP_033927864.1
type: Protein
SIO_000068: ncbiprotein

position:606849:1
position: 606849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611112:1
position: 611112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606849-606980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:607621-607739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607788-608216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608758-608930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:609129-609305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609900-610124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610976-611112:1:exon

LOC117437534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylthioribose-1-phosphate isomerase isoform X2
translation: MALESIRYRRGSLSVLNQLLLPERIRYERVGGAERAWTVINSMEVRGAPAIALVACLSLAVELATGADAGAGTGGDGDAGTGAAGGTGAGGDVGGDANAGAGGDADAGADTSTGAGVGAGTDGDAGTGTSTGVGVDAGTGTGVGAGTGTDGDAGTGPSPGAEVAALEAFVQQRLRFLLTARPTAVNLLREAERLQELIRGWSRSPGITAPELRERIIEHIEGLLAKDRQDNESIGAYGAQDILRRVPPGATVTILTHCNTGSLATAGYGTALGIVRTLHAQGRLRRVLCTETRPYNQGSRLTAFELCHDHIPVTLIADSAAAAAMGEHRVDAVLVGADRVAANGDTANKIGTLALALAARHNRIPFYVAAPTSSLDPMVPNGSLIPMEERPGRELTHLQGLCLAPPGIDVWNPAFDVTPHDLITGGVVTERGVFPPGDVTRALSACAARGQ
SIO_010081: LOC117437534
subclass of: SO_0000673
so part of: LOC117437534
location: join(606849..606980,607621..607739,607788..607993,608030..608216,608758..608930,609129..609305,609900..610124,610976..611112)
location: region:606849-611112:1
so has part: feature:606849-606980:1:exon
so has part: feature:607621-607739:1:exon
so has part: feature:607788-607993:1:exon
so has part: feature:608030-608216:1:exon
so has part: feature:608758-608930:1:exon
so has part: feature:609129-609305:1:exon
so has part: feature:609900-610124:1:exon
so has part: feature:610976-611112:1:exon

XP_033927865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:606849-606980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:607621-607739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607788-607993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608030-608216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608758-608930:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609129-609305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609900-610124:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610976-611112:1:exon

LOC117437535
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 611187..611742
location: region:611187-611742:1
so has part: feature:611187-611742:1:exon
subclass of: SO_0000010

117437535
type: Gene
SIO_000068: ncbigene

position:611187:1
position: 611187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611742:1
position: 611742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611187-611742:1:exon

LOC117437535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437535
product: chromosome 23 C19orf53 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071975.1
SIO_010081: LOC117437535
subclass of: SO_0000673
so part of: LOC117437535
location: join(611187..611302,611398..611453,611548..611742)
location: region:611187-611742:1
so has part: feature:611187-611302:1:exon
so has part: feature:611398-611453:1:exon
so has part: feature:611548-611742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:611187-611302:1:exon

position:611302:1
position: 611302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:611398-611453:1:exon

position:611398:1
position: 611398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611453:1
position: 611453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611548-611742:1:exon

position:611548:1
position: 611548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leydig cell tumor 10 kDa protein homolog
translation: MAQGRPKAAAKRPRKETGTGNRGSRKGGRTIAPKKLHVIRQQKLKKRLEVAIRARIERDARQRACAAPPPPQRPAPNKGKARKGRG
SIO_010081: LOC117437535
subclass of: SO_0000673
so part of: LOC117437535
location: join(611221..611302,611398..611453,611548..611670)
location: region:611221-611670:1
so has part: feature:611221-611302:1:exon
so has part: feature:611398-611453:1:exon
so has part: feature:611548-611670:1:exon

XP_033927866.1
type: Protein
SIO_000068: ncbiprotein

position:611221:1
position: 611221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611670:1
position: 611670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611221-611302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611398-611453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611548-611670:1:exon

LOC101869569
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101869569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 621759..622835
location: region:621759-622835:1
so has part: feature:621759-622835:1:exon
subclass of: SO_0000010

101869569
type: Gene
SIO_000068: ncbigene

position:621759:1
position: 621759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622835:1
position: 622835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621759-622835:1:exon

LOC101869569
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869569
product: nanos C2HC-type zinc finger 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072086.1
SIO_010081: LOC101869569
subclass of: SO_0000673
so part of: LOC101869569
location: join(621759..621862,621951..622142,622220..622514,622606..622835)
location: region:621759-622835:1
so has part: feature:621759-621862:1:exon
so has part: feature:621951-622142:1:exon
so has part: feature:622220-622514:1:exon
so has part: feature:622606-622835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621759-621862:1:exon

position:621862:1
position: 621862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621951-622142:1:exon

position:621951:1
position: 621951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622142:1
position: 622142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622220-622514:1:exon

position:622220:1
position: 622220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622514:1
position: 622514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:622606-622835:1:exon

position:622606:1
position: 622606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101869569
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869569
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nanos homolog 3
translation: MATGERRFEVWGDYLGLAAVVAALRRMEAAVTPGAYHGYHHRYHRYNWYHHRYHGYHRHHHWHHLYNRYEHRYHNWYHHRYNRYHHGHHRYHHDHRYNRPPSVQPVPPRAPPVPPPVQPVPGRQSGGCPFCRHNGEAKQVYTGHRLRDASGRVLCPVLRSYVCPQCGATEDRAHTRRFCPLTRRGYTSVYNRSTGGQGGASGWSFPPPAVPRS
SIO_010081: LOC101869569
subclass of: SO_0000673
so part of: LOC101869569
location: join(621759..621862,621951..622142,622220..622514,622606..622656)
location: region:621759-622656:1
so has part: feature:621759-621862:1:exon
so has part: feature:621951-622142:1:exon
so has part: feature:622220-622514:1:exon
so has part: feature:622606-622656:1:exon

XP_033927977.1
type: Protein
SIO_000068: ncbiprotein

position:622656:1
position: 622656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621759-621862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621951-622142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622220-622514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622606-622656:1:exon

LOC117437536
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 626720..636614
location: region:626720-636614:1
so has part: feature:626720-636614:1:exon
subclass of: SO_0000010

117437536
type: Gene
SIO_000068: ncbigene

position:626720:1
position: 626720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636614:1
position: 636614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626720-636614:1:exon

LOC117437536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437536
product: DDB1 and CUL4 associated factor 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071976.1
SIO_010081: LOC117437536
subclass of: SO_0000673
so part of: LOC117437536
location: join(626720..626822,627785..627882,628502..628637,628724..628830,629937..630061,630889..631059,632089..632463,632966..633057,633707..633835,634400..634485,634570..634674,635734..635849,636544..636614)
location: region:626720-636614:1
so has part: feature:626720-626822:1:exon
so has part: feature:627785-627882:1:exon
so has part: feature:628502-628637:1:exon
so has part: feature:628724-628830:1:exon
so has part: feature:629937-630061:1:exon
so has part: feature:630889-631059:1:exon
so has part: feature:632089-632463:1:exon
so has part: feature:632966-633057:1:exon
so has part: feature:633707-633835:1:exon
so has part: feature:634400-634485:1:exon
so has part: feature:634570-634674:1:exon
so has part: feature:635734-635849:1:exon
so has part: feature:636544-636614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626720-626822:1:exon

position:626822:1
position: 626822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:627785-627882:1:exon

position:627785:1
position: 627785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627882:1
position: 627882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:628502-628637:1:exon

position:628502:1
position: 628502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628637:1
position: 628637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:628724-628830:1:exon

position:628724:1
position: 628724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628830:1
position: 628830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:629937-630061:1:exon

position:629937:1
position: 629937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630061:1
position: 630061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:630889-631059:1:exon

position:630889:1
position: 630889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631059:1
position: 631059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:632089-632463:1:exon

position:632089:1
position: 632089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632463:1
position: 632463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:632966-633057:1:exon

position:632966:1
position: 632966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633057:1
position: 633057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:633707-633835:1:exon

position:633707:1
position: 633707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633835:1
position: 633835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:634400-634485:1:exon

position:634400:1
position: 634400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634485:1
position: 634485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:634570-634674:1:exon

position:634570:1
position: 634570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634674:1
position: 634674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:635734-635849:1:exon

position:635734:1
position: 635734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635849:1
position: 635849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:636544-636614:1:exon

position:636544:1
position: 636544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 15
translation: MAPSSNAERGGSGNRNRRERENLVRQLQRGRLYGHLSPRLFRKLPPRVCVSLKSIVDEELLRVGHIFLGFSKCGRFVLSYTSNSSDDDLSFYIYHLYWWEFNVHSKLKLVRQVRLFQDEEIYSDLYLTVCEWPSDSAKVIVFGFNTRSATGLLLNMMMLSDENHRDIYISIVATPAPLPCAVCRAPGSGSRQCLCQGFMLHTKYQVVYPFPTFQPAFQLKRDHVVLLNTSYSLVACAVAVRDAGDAASSQILYSHRTPPTPSPSPPRARLPPDDPEPAPLPVMGGGSPVPAPPPSPAVAKAKEFVADLFRRAQGGGEDEEEGGGPPPTPITPPPPGPGGCPPPPGPPEPGYINYTQLRYVLEPGAAEEELEDDKMSLPFLVTDLRGRSLKPLKERAAAPDQFLAVEQLTLDFEYVINEVIRQDASWARQFCSFSDYDIVILEVCPETNQVVINIGLLLLAFPSPDEEGQLRPKSYHTSLKVAWDLNTGAFVTVGVGDLTEVKGQTSGSVWSAYRKGCVDTVMRWLVPESSARYVNRMTNEALHKGCSLKVLADNERYTWIVL
SIO_010081: LOC117437536
subclass of: SO_0000673
so part of: LOC117437536
location: join(626730..626822,627785..627882,628502..628637,628724..628830,629937..630061,630889..631059,632089..632463,632966..633057,633707..633835,634400..634485,634570..634674,635734..635849,636544..636599)
location: region:626730-636599:1
so has part: feature:626730-626822:1:exon
so has part: feature:627785-627882:1:exon
so has part: feature:628502-628637:1:exon
so has part: feature:628724-628830:1:exon
so has part: feature:629937-630061:1:exon
so has part: feature:630889-631059:1:exon
so has part: feature:632089-632463:1:exon
so has part: feature:632966-633057:1:exon
so has part: feature:633707-633835:1:exon
so has part: feature:634400-634485:1:exon
so has part: feature:634570-634674:1:exon
so has part: feature:635734-635849:1:exon
so has part: feature:636544-636599:1:exon

XP_033927867.1
type: Protein
SIO_000068: ncbiprotein

position:626730:1
position: 626730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636599:1
position: 636599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626730-626822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:627785-627882:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628502-628637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:628724-628830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:629937-630061:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630889-631059:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632089-632463:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:632966-633057:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:633707-633835:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:634400-634485:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634570-634674:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:635734-635849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:636544-636599:1:exon

LOC117437580
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(637401..650421)
location: region:637401-650421:-1
so has part: feature:637401-650421:-1:exon
subclass of: SO_0000010

117437580
type: Gene
SIO_000068: ncbigene

position:637401:-1
position: 637401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650421:-1
position: 650421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637401-650421:-1:exon

LOC117437580
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437580
product: regulatory factor X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072087.1
SIO_010081: LOC117437580
subclass of: SO_0000673
so part of: LOC117437580
location: complement(join(637401..637537,638044..638086,638796..638949,639616..639824,640716..640865,641471..641568,642853..643004,644210..644316,645414..645532,646159..646271,647078..647197,647838..647953,648431..648614,650363..650421))
location: region:637401-650421:-1
so has part: feature:650363-650421:-1:exon
so has part: feature:648431-648614:-1:exon
so has part: feature:647838-647953:-1:exon
so has part: feature:647078-647197:-1:exon
so has part: feature:646159-646271:-1:exon
so has part: feature:645414-645532:-1:exon
so has part: feature:644210-644316:-1:exon
so has part: feature:642853-643004:-1:exon
so has part: feature:641471-641568:-1:exon
so has part: feature:640716-640865:-1:exon
so has part: feature:639616-639824:-1:exon
so has part: feature:638796-638949:-1:exon
so has part: feature:638044-638086:-1:exon
so has part: feature:637401-637537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:650363-650421:-1:exon

position:650363:-1
position: 650363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648431-648614:-1:exon

position:648431:-1
position: 648431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648614:-1
position: 648614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:647838-647953:-1:exon

position:647838:-1
position: 647838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647953:-1
position: 647953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:647078-647197:-1:exon

position:647078:-1
position: 647078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647197:-1
position: 647197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:646159-646271:-1:exon

position:646159:-1
position: 646159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646271:-1
position: 646271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:645414-645532:-1:exon

position:645414:-1
position: 645414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645532:-1
position: 645532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:644210-644316:-1:exon

position:644210:-1
position: 644210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644316:-1
position: 644316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:642853-643004:-1:exon

position:642853:-1
position: 642853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643004:-1
position: 643004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:641471-641568:-1:exon

position:641471:-1
position: 641471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641568:-1
position: 641568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:640716-640865:-1:exon

position:640716:-1
position: 640716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640865:-1
position: 640865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:639616-639824:-1:exon

position:639616:-1
position: 639616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639824:-1
position: 639824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:638796-638949:-1:exon

position:638796:-1
position: 638796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638949:-1
position: 638949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:638044-638086:-1:exon

position:638044:-1
position: 638044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638086:-1
position: 638086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:637401-637537:-1:exon

position:637537:-1
position: 637537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MHC class II regulatory factor RFX1
translation: MEDQQHLAMRQQPFAQKRQACSGWLENYEGAEGVSLPRSALYCHYLLHCQHRALPPVNAASFGKLIRSVFPGAANTETGNQGHYLLHCQHRALPPVNAASFGKLIRSVFPGLRTRRLGTRGNSKYHYYGLRIKAGSPLLRLMEDQQHLAMRQQPFAQKQRLKPIQKVEGVTNGATVAAAPPGLTDISSQVQQYQQFLDASRALAEFPDLDLMEKPLPDGAGTDDLKVFQLLYREHCEAMVDVLINLQFTLVETLWKTFWRCSLSPPSDGAGAVHEEAEKRLPQARLVALCKWEPALRWVRDCDHAVYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTSAMMNIPEEMVRVKVAAASAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKATLQQQNSLEQWAAWLDAVVGRVLKPHAGTPHFPRAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLVEHRVAQARGQSPIAVMGEFANLSSLNSLDPDKDEEEEDEDESEEEAELGLGEGHALTPDPLEPPPKLPRFVQALPSS
SIO_010081: LOC117437580
subclass of: SO_0000673
so part of: LOC117437580
location: complement(join(637401..637537,638044..638086,638796..638949,639616..639824,640716..640865,641471..641568,642853..643004,644210..644316,645414..645532,646159..646271,647078..647197,647838..647953,648431..648614,650363..650421))
location: region:637401-650421:-1
so has part: feature:650363-650421:-1:exon
so has part: feature:648431-648614:-1:exon
so has part: feature:647838-647953:-1:exon
so has part: feature:647078-647197:-1:exon
so has part: feature:646159-646271:-1:exon
so has part: feature:645414-645532:-1:exon
so has part: feature:644210-644316:-1:exon
so has part: feature:642853-643004:-1:exon
so has part: feature:641471-641568:-1:exon
so has part: feature:640716-640865:-1:exon
so has part: feature:639616-639824:-1:exon
so has part: feature:638796-638949:-1:exon
so has part: feature:638044-638086:-1:exon
so has part: feature:637401-637537:-1:exon

XP_033927978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:650363-650421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648431-648614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647838-647953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647078-647197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:646159-646271:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645414-645532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644210-644316:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:642853-643004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:641471-641568:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640716-640865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:639616-639824:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:638796-638949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638044-638086:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:637401-637537:-1:exon

LOC117437528
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(652954..653329)
location: region:652954-653329:-1
so has part: feature:652954-653329:-1:exon
subclass of: SO_0000011

117437528
type: Gene
SIO_000068: ncbigene

position:652954:-1
position: 652954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653329:-1
position: 653329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652954-653329:-1:exon

LOC117437528
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117437528
product: uncharacterized LOC117437528
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004550463.1
SIO_010081: LOC117437528
subclass of: SO_0000673
so part of: LOC117437528
location: complement(join(652954..653054,653140..653228,653310..653329))
location: region:652954-653329:-1
so has part: feature:653310-653329:-1:exon
so has part: feature:653140-653228:-1:exon
so has part: feature:652954-653054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:653310-653329:-1:exon

position:653310:-1
position: 653310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:653140-653228:-1:exon

position:653140:-1
position: 653140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653228:-1
position: 653228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652954-653054:-1:exon

position:653054:-1
position: 653054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437527
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 655642..659314
location: region:655642-659314:1
so has part: feature:655642-659314:1:exon
subclass of: SO_0000010

117437527
type: Gene
SIO_000068: ncbigene

position:655642:1
position: 655642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659314:1
position: 659314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655642-659314:1:exon

LOC117437527
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437527
product: caseinolytic mitochondrial matrix peptidase proteolytic subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071925.1
SIO_010081: LOC117437527
subclass of: SO_0000673
so part of: LOC117437527
location: join(655642..655689,655813..655908,656195..656266,657561..657657,657742..657929,658572..658677,659071..659314)
location: region:655642-659314:1
so has part: feature:655642-655689:1:exon
so has part: feature:655813-655908:1:exon
so has part: feature:656195-656266:1:exon
so has part: feature:657561-657657:1:exon
so has part: feature:657742-657929:1:exon
so has part: feature:658572-658677:1:exon
so has part: feature:659071-659314:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:655642-655689:1:exon

position:655689:1
position: 655689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655813-655908:1:exon

position:655813:1
position: 655813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655908:1
position: 655908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656195-656266:1:exon

position:656195:1
position: 656195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656266:1
position: 656266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:657561-657657:1:exon

position:657561:1
position: 657561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657657:1
position: 657657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:657742-657929:1:exon

position:657742:1
position: 657742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657929:1
position: 657929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:658572-658677:1:exon

position:658572:1
position: 658572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658677:1
position: 658677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:659071-659314:1:exon

position:659071:1
position: 659071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117437527
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437527
product: caseinolytic mitochondrial matrix peptidase proteolytic subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034071924.1
SIO_010081: LOC117437527
subclass of: SO_0000673
so part of: LOC117437527
location: join(655670..655713,655813..655908,656195..656266,657561..657657,657742..657929,658572..658677,659071..659314)
location: region:655670-659314:1
so has part: feature:655670-655713:1:exon
so has part: feature:655813-655908:1:exon
so has part: feature:656195-656266:1:exon
so has part: feature:657561-657657:1:exon
so has part: feature:657742-657929:1:exon
so has part: feature:658572-658677:1:exon
so has part: feature:659071-659314:1:exon

position:655670:1
position: 655670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655670-655713:1:exon

position:655713:1
position: 655713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:655813-655908:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656195-656266:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:657561-657657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657742-657929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658572-658677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659071-659314:1:exon

LOC117437527
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X1
translation: MRPVLAVRAAERGPRGLCRVQAWARGLHRTGPRSSPPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSLASLVIAQLLFLQSESNTKPIHMYINSPGGAVTSGLAIYDTMQYVLNPVCTWCVGQAASMGSLLLAGGAPGQRHALPNARIMVHQPSGGARGQATDIAIQAEEILTLKRQINGIYAKHTGQPLSVIEAAMERDRYLSPVEAQEFGLLDRVLVHPPPRGEDEPRLVQKEPPPTPPVPPNPSPAS
SIO_010081: LOC117437527
subclass of: SO_0000673
so part of: LOC117437527
location: join(655672..655713,655813..655908,656195..656266,657561..657657,657742..657929,658572..658677,659071..659243)
location: region:655672-659243:1
so has part: feature:655672-655713:1:exon
so has part: feature:655813-655908:1:exon
so has part: feature:656195-656266:1:exon
so has part: feature:657561-657657:1:exon
so has part: feature:657742-657929:1:exon
so has part: feature:658572-658677:1:exon
so has part: feature:659071-659243:1:exon

XP_033927815.1
type: Protein
SIO_000068: ncbiprotein

position:655672:1
position: 655672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659243:1
position: 659243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655672-655713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655813-655908:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656195-656266:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:657561-657657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657742-657929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658572-658677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659071-659243:1:exon

LOC117437527
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X2
translation: MRPVLARGLCRVQAWARGLHRTGPRSSPPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSLASLVIAQLLFLQSESNTKPIHMYINSPGGAVTSGLAIYDTMQYVLNPVCTWCVGQAASMGSLLLAGGAPGQRHALPNARIMVHQPSGGARGQATDIAIQAEEILTLKRQINGIYAKHTGQPLSVIEAAMERDRYLSPVEAQEFGLLDRVLVHPPPRGEDEPRLVQKEPPPTPPVPPNPSPAS
SIO_010081: LOC117437527
subclass of: SO_0000673
so part of: LOC117437527
location: join(655672..655689,655813..655908,656195..656266,657561..657657,657742..657929,658572..658677,659071..659243)
location: region:655672-659243:1
so has part: feature:655672-655689:1:exon
so has part: feature:655813-655908:1:exon
so has part: feature:656195-656266:1:exon
so has part: feature:657561-657657:1:exon
so has part: feature:657742-657929:1:exon
so has part: feature:658572-658677:1:exon
so has part: feature:659071-659243:1:exon

XP_033927816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:655672-655689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:655813-655908:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656195-656266:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:657561-657657:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657742-657929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658572-658677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659071-659243:1:exon

LOC117437526
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(660413..667601)
location: region:660413-667601:-1
so has part: feature:660413-667601:-1:exon
subclass of: SO_0000010

117437526
type: Gene
SIO_000068: ncbigene

position:660413:-1
position: 660413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667601:-1
position: 667601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660413-667601:-1:exon

LOC117437526
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437526
product: general transcription factor IIF subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034071923.1
SIO_010081: LOC117437526
subclass of: SO_0000673
so part of: LOC117437526
location: complement(join(660413..660508,660565..660774,661459..661552,661924..662062,662149..662222,662337..662456,662548..662609,662913..663057,663144..663322,664275..664445,665111..665304,666302..666374,666465..666511,666604..666667,667568..667601))
location: region:660413-667601:-1
so has part: feature:667568-667601:-1:exon
so has part: feature:666604-666667:-1:exon
so has part: feature:666465-666511:-1:exon
so has part: feature:666302-666374:-1:exon
so has part: feature:665111-665304:-1:exon
so has part: feature:664275-664445:-1:exon
so has part: feature:663144-663322:-1:exon
so has part: feature:662913-663057:-1:exon
so has part: feature:662548-662609:-1:exon
so has part: feature:662337-662456:-1:exon
so has part: feature:662149-662222:-1:exon
so has part: feature:661924-662062:-1:exon
so has part: feature:661459-661552:-1:exon
so has part: feature:660565-660774:-1:exon
so has part: feature:660413-660508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667568-667601:-1:exon

position:667568:-1
position: 667568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666604-666667:-1:exon

position:666604:-1
position: 666604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666667:-1
position: 666667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666465-666511:-1:exon

position:666465:-1
position: 666465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666511:-1
position: 666511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:666302-666374:-1:exon

position:666302:-1
position: 666302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666374:-1
position: 666374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:665111-665304:-1:exon

position:665111:-1
position: 665111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665304:-1
position: 665304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:664275-664445:-1:exon

position:664275:-1
position: 664275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664445:-1
position: 664445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:663144-663322:-1:exon

position:663144:-1
position: 663144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663322:-1
position: 663322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:662913-663057:-1:exon

position:662913:-1
position: 662913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663057:-1
position: 663057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:662548-662609:-1:exon

position:662548:-1
position: 662548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662609:-1
position: 662609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:662337-662456:-1:exon

position:662337:-1
position: 662337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662456:-1
position: 662456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:662149-662222:-1:exon

position:662149:-1
position: 662149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662222:-1
position: 662222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:661924-662062:-1:exon

position:661924:-1
position: 661924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662062:-1
position: 662062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:661459-661552:-1:exon

position:661459:-1
position: 661459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661552:-1
position: 661552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:660565-660774:-1:exon

position:660565:-1
position: 660565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660774:-1
position: 660774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:660413-660508:-1:exon

position:660508:-1
position: 660508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437526
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437526
product: general transcription factor IIF subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034071922.1
SIO_010081: LOC117437526
subclass of: SO_0000673
so part of: LOC117437526
location: complement(join(660519..660774,661459..661552,661924..662062,662149..662222,662337..662456,662548..662609,662913..663057,663144..663322,664275..664445,665111..665304,666302..666374,666465..666511,666604..666667,667568..667601))
location: region:660519-667601:-1
so has part: feature:667568-667601:-1:exon
so has part: feature:666604-666667:-1:exon
so has part: feature:666465-666511:-1:exon
so has part: feature:666302-666374:-1:exon
so has part: feature:665111-665304:-1:exon
so has part: feature:664275-664445:-1:exon
so has part: feature:663144-663322:-1:exon
so has part: feature:662913-663057:-1:exon
so has part: feature:662548-662609:-1:exon
so has part: feature:662337-662456:-1:exon
so has part: feature:662149-662222:-1:exon
so has part: feature:661924-662062:-1:exon
so has part: feature:661459-661552:-1:exon
so has part: feature:660519-660774:-1:exon

position:660519:-1
position: 660519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667568-667601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666604-666667:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666465-666511:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666302-666374:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:665111-665304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:664275-664445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663144-663322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662913-663057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:662548-662609:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:662337-662456:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662149-662222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661924-662062:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:661459-661552:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:660519-660774:-1:exon

LOC117437526
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor IIF subunit 1
translation: MAALGTSSQMVTEYVVRVPKNTPKRYNIMAFNAADRVNFSTWHQARMERDLSNKRIYQEEELPESGAGSEFHRRLRDEARRRKYGIILREFRPEDQPWMLRVNGKAGRKYRGVRKGGVTENASYYIFTQCPDGAFEAFPVQHWFNFTPLAKHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLRDQDEEEEEKEKAAKKKGGELRIHDLEEDLELSSEDSEGSEGEGEKAPRPKKAAPGGKRKKKKKGSEDEAFEDSDDGDFEGQEVDYMSDESSSSMEEEVGKTKVTKEEEGPKGIDEASESSEDSEEEKATEDKEEEEEEKAAPTPQEKKKKKDSSDESQTSEESDIDSETSSALFMAKKKTPPKRERRGSATSSHGNSRPGTPTEPPPSTGSTLRAAASRLEQGRRAPPEPPAAKRLKLEPGPQPPSGKSTPSSGEVQLTEEAVRRYLTRKPMTTKDLLKKFQTKRTGLSSDATVNVLAQILKRLNPERKVIGDKMHFSLKE
SIO_010081: LOC117437526
subclass of: SO_0000673
so part of: LOC117437526
location: complement(join(660570..660774,661459..661552,661924..662062,662149..662222,662337..662456,662548..662609,662913..663057,663144..663322,664275..664445,665111..665304,666302..666374,666465..666511,666604..666615))
location: region:660570-666615:-1
so has part: feature:666604-666615:-1:exon
so has part: feature:666465-666511:-1:exon
so has part: feature:666302-666374:-1:exon
so has part: feature:665111-665304:-1:exon
so has part: feature:664275-664445:-1:exon
so has part: feature:663144-663322:-1:exon
so has part: feature:662913-663057:-1:exon
so has part: feature:662548-662609:-1:exon
so has part: feature:662337-662456:-1:exon
so has part: feature:662149-662222:-1:exon
so has part: feature:661924-662062:-1:exon
so has part: feature:661459-661552:-1:exon
so has part: feature:660570-660774:-1:exon

XP_033927813.1
type: Protein
SIO_000068: ncbiprotein

position:660570:-1
position: 660570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666615:-1
position: 666615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666604-666615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666465-666511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666302-666374:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665111-665304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664275-664445:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663144-663322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662913-663057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662548-662609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:662337-662456:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:662149-662222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661924-662062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661459-661552:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:660570-660774:-1:exon

LOC117437526
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor IIF subunit 1
translation: MAALGTSSQMVTEYVVRVPKNTPKRYNIMAFNAADRVNFSTWHQARMERDLSNKRIYQEEELPESGAGSEFHRRLRDEARRRKYGIILREFRPEDQPWMLRVNGKAGRKYRGVRKGGVTENASYYIFTQCPDGAFEAFPVQHWFNFTPLAKHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLRDQDEEEEEKEKAAKKKGGELRIHDLEEDLELSSEDSEGSEGEGEKAPRPKKAAPGGKRKKKKKGSEDEAFEDSDDGDFEGQEVDYMSDESSSSMEEEVGKTKVTKEEEGPKGIDEASESSEDSEEEKATEDKEEEEEEKAAPTPQEKKKKKDSSDESQTSEESDIDSETSSALFMAKKKTPPKRERRGSATSSHGNSRPGTPTEPPPSTGSTLRAAASRLEQGRRAPPEPPAAKRLKLEPGPQPPSGKSTPSSGEVQLTEEAVRRYLTRKPMTTKDLLKKFQTKRTGLSSDATVNVLAQILKRLNPERKVIGDKMHFSLKE
SIO_010081: LOC117437526
subclass of: SO_0000673
so part of: LOC117437526
location: complement(join(660570..660774,661459..661552,661924..662062,662149..662222,662337..662456,662548..662609,662913..663057,663144..663322,664275..664445,665111..665304,666302..666374,666465..666511,666604..666615))
location: region:660570-666615:-1
so has part: feature:666604-666615:-1:exon
so has part: feature:666465-666511:-1:exon
so has part: feature:666302-666374:-1:exon
so has part: feature:665111-665304:-1:exon
so has part: feature:664275-664445:-1:exon
so has part: feature:663144-663322:-1:exon
so has part: feature:662913-663057:-1:exon
so has part: feature:662548-662609:-1:exon
so has part: feature:662337-662456:-1:exon
so has part: feature:662149-662222:-1:exon
so has part: feature:661924-662062:-1:exon
so has part: feature:661459-661552:-1:exon
so has part: feature:660570-660774:-1:exon

XP_033927814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:666604-666615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666465-666511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666302-666374:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665111-665304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664275-664445:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663144-663322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662913-663057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662548-662609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:662337-662456:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:662149-662222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661924-662062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:661459-661552:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:660570-660774:-1:exon

LOC117437581
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(668084..678806)
location: region:668084-678806:-1
so has part: feature:668084-678806:-1:exon
subclass of: SO_0000010

117437581
type: Gene
SIO_000068: ncbigene

position:668084:-1
position: 668084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678806:-1
position: 678806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668084-678806:-1:exon

LOC117437581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437581
product: KH-type splicing regulatory protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034072088.1
SIO_010081: LOC117437581
subclass of: SO_0000673
so part of: LOC117437581
location: complement(join(668084..668186,669014..669174,669748..669825,670292..670483,670579..670667,670840..670958,671388..671548,671668..671803,671882..671982,672809..672911,673314..673412,674107..674205,674284..674455,676212..676269,676379..676450,676544..676593,676678..676717,676998..677036,677133..677229,678545..678806))
location: region:668084-678806:-1
so has part: feature:678545-678806:-1:exon
so has part: feature:677133-677229:-1:exon
so has part: feature:676998-677036:-1:exon
so has part: feature:676678-676717:-1:exon
so has part: feature:676544-676593:-1:exon
so has part: feature:676379-676450:-1:exon
so has part: feature:676212-676269:-1:exon
so has part: feature:674284-674455:-1:exon
so has part: feature:674107-674205:-1:exon
so has part: feature:673314-673412:-1:exon
so has part: feature:672809-672911:-1:exon
so has part: feature:671882-671982:-1:exon
so has part: feature:671668-671803:-1:exon
so has part: feature:671388-671548:-1:exon
so has part: feature:670840-670958:-1:exon
so has part: feature:670579-670667:-1:exon
so has part: feature:670292-670483:-1:exon
so has part: feature:669748-669825:-1:exon
so has part: feature:669014-669174:-1:exon
so has part: feature:668084-668186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678545-678806:-1:exon

position:678545:-1
position: 678545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:677133-677229:-1:exon

position:677133:-1
position: 677133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677229:-1
position: 677229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:676998-677036:-1:exon

position:676998:-1
position: 676998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677036:-1
position: 677036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:676678-676717:-1:exon

position:676678:-1
position: 676678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676717:-1
position: 676717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:676544-676593:-1:exon

position:676544:-1
position: 676544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676593:-1
position: 676593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:676379-676450:-1:exon

position:676379:-1
position: 676379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676450:-1
position: 676450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:676212-676269:-1:exon

position:676212:-1
position: 676212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676269:-1
position: 676269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:674284-674455:-1:exon

position:674284:-1
position: 674284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674455:-1
position: 674455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:674107-674205:-1:exon

position:674107:-1
position: 674107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674205:-1
position: 674205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:673314-673412:-1:exon

position:673314:-1
position: 673314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673412:-1
position: 673412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:672809-672911:-1:exon

position:672809:-1
position: 672809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672911:-1
position: 672911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:671882-671982:-1:exon

position:671882:-1
position: 671882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671982:-1
position: 671982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:671668-671803:-1:exon

position:671668:-1
position: 671668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671803:-1
position: 671803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:671388-671548:-1:exon

position:671388:-1
position: 671388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671548:-1
position: 671548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:670840-670958:-1:exon

position:670840:-1
position: 670840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670958:-1
position: 670958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:670579-670667:-1:exon

position:670579:-1
position: 670579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670667:-1
position: 670667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:670292-670483:-1:exon

position:670292:-1
position: 670292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670483:-1
position: 670483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:669748-669825:-1:exon

position:669748:-1
position: 669748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669825:-1
position: 669825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:669014-669174:-1:exon

position:669014:-1
position: 669014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669174:-1
position: 669174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:668084-668186:-1:exon

position:668186:-1
position: 668186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437581
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: far upstream element-binding protein 2
translation: MSEFSASGPPSSAAPGGGGGGGAPPSASASASAPPAAGGGGGGPGTGGGGGGGGPGGGGGGGGSGPPXPPPAGIRKDAFADAVQRARQIAAKIGGDAATTVNNNTPDFSFGGQKRQLEDGDQPESKKLAAQGDSLPAPLGPIHPPPRSTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAVQKAKLMLDDIVSRGRGGPPGQFHDNANGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPERCEHAARIINDLLQSLRSGPPGGPGLPPGGRGRGRGQGTWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGPGGPPGPAGPMGPFNPGPFNQGPPGAPPHPGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAADPNAAWAAYYSHYYQQPPGPVPGQPPAPTAPPVQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAAQVATGGGPGAPPGPQPDYSAAWAEYYRQQAAYYGQTPGAAGPAPPPTQQGQQAQ
SIO_010081: LOC117437581
subclass of: SO_0000673
so part of: LOC117437581
location: complement(join(668178..668186,669014..669174,669748..669825,670292..670483,670579..670667,670840..670958,671388..671548,671668..671803,671882..671982,672809..672911,673314..673412,674107..674205,674284..674455,676212..676269,676379..676450,676544..676593,676678..676717,676998..677036,677133..677229,678545..678806))
location: region:668178-678806:-1
so has part: feature:678545-678806:-1:exon
so has part: feature:677133-677229:-1:exon
so has part: feature:676998-677036:-1:exon
so has part: feature:676678-676717:-1:exon
so has part: feature:676544-676593:-1:exon
so has part: feature:676379-676450:-1:exon
so has part: feature:676212-676269:-1:exon
so has part: feature:674284-674455:-1:exon
so has part: feature:674107-674205:-1:exon
so has part: feature:673314-673412:-1:exon
so has part: feature:672809-672911:-1:exon
so has part: feature:671882-671982:-1:exon
so has part: feature:671668-671803:-1:exon
so has part: feature:671388-671548:-1:exon
so has part: feature:670840-670958:-1:exon
so has part: feature:670579-670667:-1:exon
so has part: feature:670292-670483:-1:exon
so has part: feature:669748-669825:-1:exon
so has part: feature:669014-669174:-1:exon
so has part: feature:668178-668186:-1:exon

XP_033927979.1
type: Protein
SIO_000068: ncbiprotein

position:668178:-1
position: 668178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678545-678806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677133-677229:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676998-677036:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676678-676717:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676544-676593:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676379-676450:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676212-676269:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674284-674455:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:674107-674205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:673314-673412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:672809-672911:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671882-671982:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671668-671803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671388-671548:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:670840-670958:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:670579-670667:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:670292-670483:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:669748-669825:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:669014-669174:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:668178-668186:-1:exon

LOC117437582
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117437582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(684380..693144)
location: region:684380-693144:-1
so has part: feature:684380-693144:-1:exon
subclass of: SO_0000010

117437582
type: Gene
SIO_000068: ncbigene

position:684380:-1
position: 684380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693144:-1
position: 693144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684380-693144:-1:exon

LOC117437582
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117437582
product: low-density lipoprotein receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034072089.1
SIO_010081: LOC117437582
subclass of: SO_0000673
so part of: LOC117437582
location: complement(join(684380..684403,684784..684941,685439..685513,685922..686056,686496..686637,686755..686894,687819..687937,688021..688249,688850..689023,690201..690326,690419..690538,690633..690746,690835..690957,691729..692100,692786..693144))
location: region:684380-693144:-1
so has part: feature:692786-693144:-1:exon
so has part: feature:691729-692100:-1:exon
so has part: feature:690835-690957:-1:exon
so has part: feature:690633-690746:-1:exon
so has part: feature:690419-690538:-1:exon
so has part: feature:690201-690326:-1:exon
so has part: feature:688850-689023:-1:exon
so has part: feature:688021-688249:-1:exon
so has part: feature:687819-687937:-1:exon
so has part: feature:686755-686894:-1:exon
so has part: feature:686496-686637:-1:exon
so has part: feature:685922-686056:-1:exon
so has part: feature:685439-685513:-1:exon
so has part: feature:684784-684941:-1:exon
so has part: feature:684380-684403:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:692786-693144:-1:exon

position:692786:-1
position: 692786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:691729-692100:-1:exon

position:691729:-1
position: 691729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692100:-1
position: 692100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:690835-690957:-1:exon

position:690835:-1
position: 690835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690957:-1
position: 690957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:690633-690746:-1:exon

position:690633:-1
position: 690633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690746:-1
position: 690746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:690419-690538:-1:exon

position:690419:-1
position: 690419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690538:-1
position: 690538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:690201-690326:-1:exon

position:690201:-1
position: 690201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690326:-1
position: 690326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:688850-689023:-1:exon

position:688850:-1
position: 688850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689023:-1
position: 689023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:688021-688249:-1:exon

position:688021:-1
position: 688021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688249:-1
position: 688249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:687819-687937:-1:exon

position:687819:-1
position: 687819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687937:-1
position: 687937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:686755-686894:-1:exon

position:686755:-1
position: 686755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686894:-1
position: 686894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:686496-686637:-1:exon

position:686496:-1
position: 686496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686637:-1
position: 686637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:685922-686056:-1:exon

position:685922:-1
position: 685922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686056:-1
position: 686056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:685439-685513:-1:exon

position:685439:-1
position: 685439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685513:-1
position: 685513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:684784-684941:-1:exon

position:684784:-1
position: 684784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684941:-1
position: 684941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:684380-684403:-1:exon

position:684403:-1
position: 684403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117437582
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117437582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor-like
translation: MGCVPHTVSRVPHTVSCVPHTMSCVPHTVSCVPHTVSCVPHTMSCVPHTVSCVPHTVSCVPHTVSCVPCPMPCVPTGSVSCSPSEFSCGGLQGRCVPLLWLCDGHRDCEDGSDELQCPPRSCSPDQLRCGSGSCISSSFACDGDRDCPDGTDEASCPPTPPCGSGTFRCHDGSCIPRLWLCDGDPDCADGSDETPPGCGPPRTPRPCPPLRLRCGSGECLPRRWLCDGSEDCADGSDERGCAPPSCRPDQFGCGDGRCVPGLRRCDGETDCADGSDEAECGNATACAGFRCRSGECIPMERVCDQRRDCRDWSDEPIKECGVNECLDGAGCSHVCRDLPLGYECLCPDGFRLGPDGRSCLDIDECQDPTACSQQCHNLPGSYQCGCWGGYRLEPGTNVCRALGPPPVLLFSLRHELRDLALDGSGYRRLLGPLKHMGALDVHVGNGSVFWADLSRGWIYRCPPSPPPPAAPHPVPIVALGSGAPAAIAMDWIHHLLYWTDPELGAVVVADAGGAWSRMLLREEGAKPCGIALDPLQGFLYWTDWGASAKIARSRLDGSNVELLVTEDVGWPKGITLDLPSRRLYWLDARLHALSSMDADGRRRRMLLQDPALLVQPFAITVFDERVYWSDSQLGAVFSLGLHSEQAPQQLLQERFPVQGLVLVHPLRQPPAPLDPLDVALPQPPPHSHGGGLEPTMSTETPGTPNSTSTSGNGTAGTRGSSMGPVGTRTASTALAVLLPLVALVLVGTGARGLWRWWQLRSTRSISFSNPVFRKGGGQEEEEEPLGVPPPTPPVLDDAVA
SIO_010081: LOC117437582
subclass of: SO_0000673
so part of: LOC117437582
location: complement(join(684380..684403,684784..684941,685439..685513,685922..686056,686496..686637,686755..686894,687819..687937,688021..688249,688850..689023,690201..690326,690419..690538,690633..690746,690835..690957,691729..692100,692786..693137))
location: region:684380-693137:-1
so has part: feature:692786-693137:-1:exon
so has part: feature:691729-692100:-1:exon
so has part: feature:690835-690957:-1:exon
so has part: feature:690633-690746:-1:exon
so has part: feature:690419-690538:-1:exon
so has part: feature:690201-690326:-1:exon
so has part: feature:688850-689023:-1:exon
so has part: feature:688021-688249:-1:exon
so has part: feature:687819-687937:-1:exon
so has part: feature:686755-686894:-1:exon
so has part: feature:686496-686637:-1:exon
so has part: feature:685922-686056:-1:exon
so has part: feature:685439-685513:-1:exon
so has part: feature:684784-684941:-1:exon
so has part: feature:684380-684403:-1:exon

XP_033927980.1
type: Protein
SIO_000068: ncbiprotein

position:693137:-1
position: 693137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692786-693137:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691729-692100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690835-690957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:690633-690746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:690419-690538:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690201-690326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:688850-689023:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:688021-688249:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:687819-687937:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:686755-686894:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:686496-686637:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:685922-686056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:685439-685513:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:684784-684941:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:684380-684403:-1:exon

LOC101877253
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101877253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(695352..713594)
location: region:695352-713594:-1
so has part: feature:695352-713594:-1:exon
subclass of: SO_0000010

101877253
type: Gene
SIO_000068: ncbigene

position:695352:-1
position: 695352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713594:-1
position: 713594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695352-713594:-1:exon

LOC101877253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101877253
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034071933.1
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695352..695459,696185..696324,696411..696543,696921..697022,697609..697714,697792..698066,699012..699230,699652..699729,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..712097,712569..712628,713551..713594))
location: region:695352-713594:-1
so has part: feature:713551-713594:-1:exon
so has part: feature:712569-712628:-1:exon
so has part: feature:711755-712097:-1:exon
so has part: feature:711540-711672:-1:exon
so has part: feature:710708-711100:-1:exon
so has part: feature:710386-710484:-1:exon
so has part: feature:709308-709566:-1:exon
so has part: feature:708858-708984:-1:exon
so has part: feature:708602-708775:-1:exon
so has part: feature:707759-707932:-1:exon
so has part: feature:707517-707684:-1:exon
so has part: feature:706969-707019:-1:exon
so has part: feature:706737-706867:-1:exon
so has part: feature:706477-706534:-1:exon
so has part: feature:706275-706393:-1:exon
so has part: feature:706054-706204:-1:exon
so has part: feature:705809-705972:-1:exon
so has part: feature:705643-705709:-1:exon
so has part: feature:705403-705513:-1:exon
so has part: feature:704868-705110:-1:exon
so has part: feature:704561-704674:-1:exon
so has part: feature:704362-704469:-1:exon
so has part: feature:703836-703922:-1:exon
so has part: feature:703171-703217:-1:exon
so has part: feature:702916-703082:-1:exon
so has part: feature:702089-702252:-1:exon
so has part: feature:700517-700744:-1:exon
so has part: feature:699652-699729:-1:exon
so has part: feature:699012-699230:-1:exon
so has part: feature:697792-698066:-1:exon
so has part: feature:697609-697714:-1:exon
so has part: feature:696921-697022:-1:exon
so has part: feature:696411-696543:-1:exon
so has part: feature:696185-696324:-1:exon
so has part: feature:695352-695459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:713551-713594:-1:exon

position:713551:-1
position: 713551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:712569-712628:-1:exon

position:712569:-1
position: 712569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712628:-1
position: 712628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:711755-712097:-1:exon

position:711755:-1
position: 711755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712097:-1
position: 712097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:711540-711672:-1:exon

position:711540:-1
position: 711540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711672:-1
position: 711672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710708-711100:-1:exon

position:710708:-1
position: 710708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711100:-1
position: 711100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:710386-710484:-1:exon

position:710386:-1
position: 710386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710484:-1
position: 710484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:709308-709566:-1:exon

position:709308:-1
position: 709308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709566:-1
position: 709566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:708858-708984:-1:exon

position:708858:-1
position: 708858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708984:-1
position: 708984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:708602-708775:-1:exon

position:708602:-1
position: 708602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708775:-1
position: 708775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:707759-707932:-1:exon

position:707759:-1
position: 707759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707932:-1
position: 707932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:707517-707684:-1:exon

position:707517:-1
position: 707517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707684:-1
position: 707684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:706969-707019:-1:exon

position:706969:-1
position: 706969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707019:-1
position: 707019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:706737-706867:-1:exon

position:706737:-1
position: 706737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706867:-1
position: 706867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:706477-706534:-1:exon

position:706477:-1
position: 706477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706534:-1
position: 706534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:706275-706393:-1:exon

position:706275:-1
position: 706275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706393:-1
position: 706393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:706054-706204:-1:exon

position:706054:-1
position: 706054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706204:-1
position: 706204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:705809-705972:-1:exon

position:705809:-1
position: 705809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705972:-1
position: 705972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:705643-705709:-1:exon

position:705643:-1
position: 705643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705709:-1
position: 705709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:705403-705513:-1:exon

position:705403:-1
position: 705403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705513:-1
position: 705513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:704868-705110:-1:exon

position:704868:-1
position: 704868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705110:-1
position: 705110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:704561-704674:-1:exon

position:704561:-1
position: 704561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704674:-1
position: 704674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:704362-704469:-1:exon

position:704362:-1
position: 704362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704469:-1
position: 704469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:703836-703922:-1:exon

position:703836:-1
position: 703836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703922:-1
position: 703922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:703171-703217:-1:exon

position:703171:-1
position: 703171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703217:-1
position: 703217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:702916-703082:-1:exon

position:702916:-1
position: 702916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703082:-1
position: 703082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:702089-702252:-1:exon

position:702089:-1
position: 702089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702252:-1
position: 702252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:700517-700744:-1:exon

position:700517:-1
position: 700517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700744:-1
position: 700744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:699652-699729:-1:exon

position:699652:-1
position: 699652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699729:-1
position: 699729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:699012-699230:-1:exon

position:699012:-1
position: 699012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699230:-1
position: 699230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:697792-698066:-1:exon

position:697792:-1
position: 697792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698066:-1
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urn:…
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position:695459:-1
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LOC101877253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101877253
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034071932.1
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695352..695459,696185..696324,696411..696543,696921..697022,697609..697717,697792..698066,699012..699230,699652..699729,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..712097,712569..712628,713551..713594))
location: region:695352-713594:-1
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SIO_000300: 31
SIO_000628: feature:697609-697717:-1:exon

position:697717:-1
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urn:…
SIO_000300: 32
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urn:…
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SIO_000628: feature:695352-695459:-1:exon

LOC101877253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101877253
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034071931.1
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695352..695459,696185..696324,696411..696543,696921..697022,697609..697714,697792..698066,699003..699230,699652..699729,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..712097,712569..712628,713551..713594))
location: region:695352-713594:-1
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urn:…
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position:699003:-1
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urn:…
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LOC101877253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101877253
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034071930.1
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695352..695459,696185..696324,696411..696543,696921..697022,697609..697717,697792..698066,699003..699230,699652..699729,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..712097,712569..712628,713551..713594))
location: region:695352-713594:-1
so has part: feature:713551-713594:-1:exon
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urn:…
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urn:…
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LOC101877253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101877253
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034071929.1
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695352..695459,696185..696324,696411..696543,696921..697022,697609..697714,697792..698066,699012..699230,699652..699729,700033..700131,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..712097,712569..712628,713551..713594))
location: region:695352-713594:-1
so has part: feature:713551-713594:-1:exon
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so has part: feature:711755-712097:-1:exon
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position:700033:-1
position: 700033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700131:-1
position: 700131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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LOC101877253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101877253
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034071928.1
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695352..695459,696185..696324,696411..696543,696921..697022,697609..697717,697792..698066,699012..699230,699652..699729,700033..700131,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..712097,712569..712628,713551..713594))
location: region:695352-713594:-1
so has part: feature:713551-713594:-1:exon
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urn:…
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LOC101877253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101877253
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034071927.1
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695352..695459,696185..696324,696411..696543,696921..697022,697609..697714,697792..698066,699003..699230,699652..699729,700033..700131,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..712097,712569..712628,713551..713594))
location: region:695352-713594:-1
so has part: feature:713551-713594:-1:exon
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urn:…
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urn:…
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LOC101877253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101877253
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034071926.1
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695352..695459,696185..696324,696411..696543,696921..697022,697609..697717,697792..698066,699003..699230,699652..699729,700033..700131,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..712097,712569..712628,713551..713594))
location: region:695352-713594:-1
so has part: feature:713551-713594:-1:exon
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urn:…
SIO_000300: 10
SIO_000628: feature:707759-707932:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:707517-707684:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706969-707019:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706737-706867:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706477-706534:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:706275-706393:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:706054-706204:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:705809-705972:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:705643-705709:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:705403-705513:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:704868-705110:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:704561-704674:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:704362-704469:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:703836-703922:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:703171-703217:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:702916-703082:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:702089-702252:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:700517-700744:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:700033-700131:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:699652-699729:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:699003-699230:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:697792-698066:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:697609-697717:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:696921-697022:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:696411-696543:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:696185-696324:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:695352-695459:-1:exon

LOC101877253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101877253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X8
translation: MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQGPTGYAQDNLHQLHKPMDPLHEKGLSEDPRYGQMKGMGLRPGAHAGMGPPPSPMDQHSQGYPSPLGGSDHASSPVPANGPSSAATMATGPLDGADPQALGGGQQSRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPVPGLQQPMATLPPPAVAGTGPVQGQVQGPGAGPTPPNYSRAHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLANAAAPSSAPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQPPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPDVGSGTAGAGGSAGSTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESDGDDSDEEEEGEEEGSESESRSVKVKIKLGRKEKAPERGKGRRRTSRSARAKPVVSDDDSDEEQEEDRSGSGTEED
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695427..695459,696185..696324,696411..696543,696921..697022,697609..697714,697792..698066,699012..699230,699652..699729,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..711976))
location: region:695427-711976:-1
so has part: feature:711755-711976:-1:exon
so has part: feature:711540-711672:-1:exon
so has part: feature:710708-711100:-1:exon
so has part: feature:710386-710484:-1:exon
so has part: feature:709308-709566:-1:exon
so has part: feature:708858-708984:-1:exon
so has part: feature:708602-708775:-1:exon
so has part: feature:707759-707932:-1:exon
so has part: feature:707517-707684:-1:exon
so has part: feature:706969-707019:-1:exon
so has part: feature:706737-706867:-1:exon
so has part: feature:706477-706534:-1:exon
so has part: feature:706275-706393:-1:exon
so has part: feature:706054-706204:-1:exon
so has part: feature:705809-705972:-1:exon
so has part: feature:705643-705709:-1:exon
so has part: feature:705403-705513:-1:exon
so has part: feature:704868-705110:-1:exon
so has part: feature:704561-704674:-1:exon
so has part: feature:704362-704469:-1:exon
so has part: feature:703836-703922:-1:exon
so has part: feature:703171-703217:-1:exon
so has part: feature:702916-703082:-1:exon
so has part: feature:702089-702252:-1:exon
so has part: feature:700517-700744:-1:exon
so has part: feature:699652-699729:-1:exon
so has part: feature:699012-699230:-1:exon
so has part: feature:697792-698066:-1:exon
so has part: feature:697609-697714:-1:exon
so has part: feature:696921-697022:-1:exon
so has part: feature:696411-696543:-1:exon
so has part: feature:696185-696324:-1:exon
so has part: feature:695427-695459:-1:exon

XP_033927824.1
type: Protein
SIO_000068: ncbiprotein

position:695427:-1
position: 695427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711976:-1
position: 711976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711755-711976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711540-711672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710708-711100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710386-710484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709308-709566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708858-708984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708602-708775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707759-707932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707517-707684:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706969-707019:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706737-706867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706477-706534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706275-706393:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706054-706204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:705809-705972:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:705643-705709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:705403-705513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704868-705110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:704561-704674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:704362-704469:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:703836-703922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:703171-703217:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:702916-703082:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:702089-702252:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:700517-700744:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:699652-699729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:699012-699230:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:697792-698066:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697609-697714:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:696921-697022:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:696411-696543:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:696185-696324:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:695427-695459:-1:exon

LOC101877253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101877253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X7
translation: MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQGPTGYAQDNLHQLHKPMDPLHEKGLSEDPRYGQMKGMGLRPGAHAGMGPPPSPMDQHSQGYPSPLGGSDHASSPVPANGPSSAATMATGPLDGADPQALGGGQQSRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPVPGLQQPMATLPPPAVAGTGPVQGQVQGPGAGPTPPNYSRAHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLANAAAPSSAPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQPPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPDVGSGTAGAGGSAGSTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESDGDDSDEEEEGEEEGSESESRSVKVKIKLGRKEKAPERGKGRRRTSRSARAKPVVSDDDSDEEQEEDRSGSGTEED
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695427..695459,696185..696324,696411..696543,696921..697022,697609..697717,697792..698066,699012..699230,699652..699729,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..711976))
location: region:695427-711976:-1
so has part: feature:711755-711976:-1:exon
so has part: feature:711540-711672:-1:exon
so has part: feature:710708-711100:-1:exon
so has part: feature:710386-710484:-1:exon
so has part: feature:709308-709566:-1:exon
so has part: feature:708858-708984:-1:exon
so has part: feature:708602-708775:-1:exon
so has part: feature:707759-707932:-1:exon
so has part: feature:707517-707684:-1:exon
so has part: feature:706969-707019:-1:exon
so has part: feature:706737-706867:-1:exon
so has part: feature:706477-706534:-1:exon
so has part: feature:706275-706393:-1:exon
so has part: feature:706054-706204:-1:exon
so has part: feature:705809-705972:-1:exon
so has part: feature:705643-705709:-1:exon
so has part: feature:705403-705513:-1:exon
so has part: feature:704868-705110:-1:exon
so has part: feature:704561-704674:-1:exon
so has part: feature:704362-704469:-1:exon
so has part: feature:703836-703922:-1:exon
so has part: feature:703171-703217:-1:exon
so has part: feature:702916-703082:-1:exon
so has part: feature:702089-702252:-1:exon
so has part: feature:700517-700744:-1:exon
so has part: feature:699652-699729:-1:exon
so has part: feature:699012-699230:-1:exon
so has part: feature:697792-698066:-1:exon
so has part: feature:697609-697717:-1:exon
so has part: feature:696921-697022:-1:exon
so has part: feature:696411-696543:-1:exon
so has part: feature:696185-696324:-1:exon
so has part: feature:695427-695459:-1:exon

XP_033927823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:711755-711976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711540-711672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710708-711100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710386-710484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709308-709566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708858-708984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708602-708775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707759-707932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707517-707684:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706969-707019:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706737-706867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706477-706534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706275-706393:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706054-706204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:705809-705972:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:705643-705709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:705403-705513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704868-705110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:704561-704674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:704362-704469:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:703836-703922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:703171-703217:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:702916-703082:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:702089-702252:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:700517-700744:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:699652-699729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:699012-699230:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:697792-698066:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697609-697717:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:696921-697022:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:696411-696543:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:696185-696324:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:695427-695459:-1:exon

LOC101877253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101877253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X6
translation: MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQGPTGYAQDNLHQLHKPMDPLHEKGLSEDPRYGQMKGMGLRPGAHAGMGPPPSPMDQHSQGYPSPLGGSDHASSPVPANGPSSAATMATGPLDGADPQALGGGQQSRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPVPGLQQPMATLPPPAVAGTGPVQGQVQGPGAGPTPPNYSRAHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLANAAAPSSAPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQPPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKREPDVGSGTAGAGGSAGSTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESDGDDSDEEEEGEEEGSESESRSVKVKIKLGRKEKAPERGKGRRRTSRSARAKPVVSDDDSDEEQEEDRSGSGTEED
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695427..695459,696185..696324,696411..696543,696921..697022,697609..697714,697792..698066,699003..699230,699652..699729,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..711976))
location: region:695427-711976:-1
so has part: feature:711755-711976:-1:exon
so has part: feature:711540-711672:-1:exon
so has part: feature:710708-711100:-1:exon
so has part: feature:710386-710484:-1:exon
so has part: feature:709308-709566:-1:exon
so has part: feature:708858-708984:-1:exon
so has part: feature:708602-708775:-1:exon
so has part: feature:707759-707932:-1:exon
so has part: feature:707517-707684:-1:exon
so has part: feature:706969-707019:-1:exon
so has part: feature:706737-706867:-1:exon
so has part: feature:706477-706534:-1:exon
so has part: feature:706275-706393:-1:exon
so has part: feature:706054-706204:-1:exon
so has part: feature:705809-705972:-1:exon
so has part: feature:705643-705709:-1:exon
so has part: feature:705403-705513:-1:exon
so has part: feature:704868-705110:-1:exon
so has part: feature:704561-704674:-1:exon
so has part: feature:704362-704469:-1:exon
so has part: feature:703836-703922:-1:exon
so has part: feature:703171-703217:-1:exon
so has part: feature:702916-703082:-1:exon
so has part: feature:702089-702252:-1:exon
so has part: feature:700517-700744:-1:exon
so has part: feature:699652-699729:-1:exon
so has part: feature:699003-699230:-1:exon
so has part: feature:697792-698066:-1:exon
so has part: feature:697609-697714:-1:exon
so has part: feature:696921-697022:-1:exon
so has part: feature:696411-696543:-1:exon
so has part: feature:696185-696324:-1:exon
so has part: feature:695427-695459:-1:exon

XP_033927822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:711755-711976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711540-711672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710708-711100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710386-710484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709308-709566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708858-708984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708602-708775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707759-707932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707517-707684:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706969-707019:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706737-706867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706477-706534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706275-706393:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706054-706204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:705809-705972:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:705643-705709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:705403-705513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704868-705110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:704561-704674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:704362-704469:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:703836-703922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:703171-703217:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:702916-703082:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:702089-702252:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:700517-700744:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:699652-699729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:699003-699230:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:697792-698066:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697609-697714:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:696921-697022:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:696411-696543:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:696185-696324:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:695427-695459:-1:exon

LOC101877253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101877253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X5
translation: MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQGPTGYAQDNLHQLHKPMDPLHEKGLSEDPRYGQMKGMGLRPGAHAGMGPPPSPMDQHSQGYPSPLGGSDHASSPVPANGPSSAATMATGPLDGADPQALGGGQQSRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPVPGLQQPMATLPPPAVAGTGPVQGQVQGPGAGPTPPNYSRAHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLANAAAPSSAPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQPPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKREPDVGSGTAGAGGSAGSTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESDGDDSDEEEEGEEEGSESESRSVKVKIKLGRKEKAPERGKGRRRTSRSARAKPVVSDDDSDEEQEEDRSGSGTEED
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695427..695459,696185..696324,696411..696543,696921..697022,697609..697717,697792..698066,699003..699230,699652..699729,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..711976))
location: region:695427-711976:-1
so has part: feature:711755-711976:-1:exon
so has part: feature:711540-711672:-1:exon
so has part: feature:710708-711100:-1:exon
so has part: feature:710386-710484:-1:exon
so has part: feature:709308-709566:-1:exon
so has part: feature:708858-708984:-1:exon
so has part: feature:708602-708775:-1:exon
so has part: feature:707759-707932:-1:exon
so has part: feature:707517-707684:-1:exon
so has part: feature:706969-707019:-1:exon
so has part: feature:706737-706867:-1:exon
so has part: feature:706477-706534:-1:exon
so has part: feature:706275-706393:-1:exon
so has part: feature:706054-706204:-1:exon
so has part: feature:705809-705972:-1:exon
so has part: feature:705643-705709:-1:exon
so has part: feature:705403-705513:-1:exon
so has part: feature:704868-705110:-1:exon
so has part: feature:704561-704674:-1:exon
so has part: feature:704362-704469:-1:exon
so has part: feature:703836-703922:-1:exon
so has part: feature:703171-703217:-1:exon
so has part: feature:702916-703082:-1:exon
so has part: feature:702089-702252:-1:exon
so has part: feature:700517-700744:-1:exon
so has part: feature:699652-699729:-1:exon
so has part: feature:699003-699230:-1:exon
so has part: feature:697792-698066:-1:exon
so has part: feature:697609-697717:-1:exon
so has part: feature:696921-697022:-1:exon
so has part: feature:696411-696543:-1:exon
so has part: feature:696185-696324:-1:exon
so has part: feature:695427-695459:-1:exon

XP_033927821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:711755-711976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711540-711672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710708-711100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710386-710484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709308-709566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708858-708984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708602-708775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707759-707932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707517-707684:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706969-707019:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706737-706867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706477-706534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706275-706393:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706054-706204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:705809-705972:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:705643-705709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:705403-705513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704868-705110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:704561-704674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:704362-704469:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:703836-703922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:703171-703217:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:702916-703082:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:702089-702252:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:700517-700744:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:699652-699729:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:699003-699230:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:697792-698066:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697609-697717:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:696921-697022:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:696411-696543:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:696185-696324:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:695427-695459:-1:exon

LOC101877253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101877253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X4
translation: MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQGPTGYAQDNLHQLHKPMDPLHEKGLSEDPRYGQMKGMGLRPGAHAGMGPPPSPMDQHSQGYPSPLGGSDHASSPVPANGPSSAATMATGPLDGADPQALGGGQQSRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPVPGLQQPMATLPPPAVAGTGPVQGQVQGPGAGPTPPNYSRAHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLANAAAPSSAPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQPPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYSAGSGSGSGSFPHTASTLCLAAELEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPDVGSGTAGAGGSAGSTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESDGDDSDEEEEGEEEGSESESRSVKVKIKLGRKEKAPERGKGRRRTSRSARAKPVVSDDDSDEEQEEDRSGSGTEED
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695427..695459,696185..696324,696411..696543,696921..697022,697609..697714,697792..698066,699012..699230,699652..699729,700033..700131,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..711976))
location: region:695427-711976:-1
so has part: feature:711755-711976:-1:exon
so has part: feature:711540-711672:-1:exon
so has part: feature:710708-711100:-1:exon
so has part: feature:710386-710484:-1:exon
so has part: feature:709308-709566:-1:exon
so has part: feature:708858-708984:-1:exon
so has part: feature:708602-708775:-1:exon
so has part: feature:707759-707932:-1:exon
so has part: feature:707517-707684:-1:exon
so has part: feature:706969-707019:-1:exon
so has part: feature:706737-706867:-1:exon
so has part: feature:706477-706534:-1:exon
so has part: feature:706275-706393:-1:exon
so has part: feature:706054-706204:-1:exon
so has part: feature:705809-705972:-1:exon
so has part: feature:705643-705709:-1:exon
so has part: feature:705403-705513:-1:exon
so has part: feature:704868-705110:-1:exon
so has part: feature:704561-704674:-1:exon
so has part: feature:704362-704469:-1:exon
so has part: feature:703836-703922:-1:exon
so has part: feature:703171-703217:-1:exon
so has part: feature:702916-703082:-1:exon
so has part: feature:702089-702252:-1:exon
so has part: feature:700517-700744:-1:exon
so has part: feature:700033-700131:-1:exon
so has part: feature:699652-699729:-1:exon
so has part: feature:699012-699230:-1:exon
so has part: feature:697792-698066:-1:exon
so has part: feature:697609-697714:-1:exon
so has part: feature:696921-697022:-1:exon
so has part: feature:696411-696543:-1:exon
so has part: feature:696185-696324:-1:exon
so has part: feature:695427-695459:-1:exon

XP_033927820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:711755-711976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711540-711672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710708-711100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710386-710484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709308-709566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708858-708984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708602-708775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707759-707932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707517-707684:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706969-707019:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706737-706867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706477-706534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706275-706393:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706054-706204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:705809-705972:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:705643-705709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:705403-705513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704868-705110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:704561-704674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:704362-704469:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:703836-703922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:703171-703217:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:702916-703082:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:702089-702252:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:700517-700744:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:700033-700131:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:699652-699729:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:699012-699230:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697792-698066:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:697609-697714:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:696921-697022:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:696411-696543:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:696185-696324:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:695427-695459:-1:exon

LOC101877253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101877253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X3
translation: MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQGPTGYAQDNLHQLHKPMDPLHEKGLSEDPRYGQMKGMGLRPGAHAGMGPPPSPMDQHSQGYPSPLGGSDHASSPVPANGPSSAATMATGPLDGADPQALGGGQQSRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPVPGLQQPMATLPPPAVAGTGPVQGQVQGPGAGPTPPNYSRAHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLANAAAPSSAPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQPPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYSAGSGSGSGSFPHTASTLCLAAELEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPDVGSGTAGAGGSAGSTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESDGDDSDEEEEGEEEGSESESRSVKVKIKLGRKEKAPERGKGRRRTSRSARAKPVVSDDDSDEEQEEDRSGSGTEED
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695427..695459,696185..696324,696411..696543,696921..697022,697609..697717,697792..698066,699012..699230,699652..699729,700033..700131,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..711976))
location: region:695427-711976:-1
so has part: feature:711755-711976:-1:exon
so has part: feature:711540-711672:-1:exon
so has part: feature:710708-711100:-1:exon
so has part: feature:710386-710484:-1:exon
so has part: feature:709308-709566:-1:exon
so has part: feature:708858-708984:-1:exon
so has part: feature:708602-708775:-1:exon
so has part: feature:707759-707932:-1:exon
so has part: feature:707517-707684:-1:exon
so has part: feature:706969-707019:-1:exon
so has part: feature:706737-706867:-1:exon
so has part: feature:706477-706534:-1:exon
so has part: feature:706275-706393:-1:exon
so has part: feature:706054-706204:-1:exon
so has part: feature:705809-705972:-1:exon
so has part: feature:705643-705709:-1:exon
so has part: feature:705403-705513:-1:exon
so has part: feature:704868-705110:-1:exon
so has part: feature:704561-704674:-1:exon
so has part: feature:704362-704469:-1:exon
so has part: feature:703836-703922:-1:exon
so has part: feature:703171-703217:-1:exon
so has part: feature:702916-703082:-1:exon
so has part: feature:702089-702252:-1:exon
so has part: feature:700517-700744:-1:exon
so has part: feature:700033-700131:-1:exon
so has part: feature:699652-699729:-1:exon
so has part: feature:699012-699230:-1:exon
so has part: feature:697792-698066:-1:exon
so has part: feature:697609-697717:-1:exon
so has part: feature:696921-697022:-1:exon
so has part: feature:696411-696543:-1:exon
so has part: feature:696185-696324:-1:exon
so has part: feature:695427-695459:-1:exon

XP_033927819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:711755-711976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711540-711672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710708-711100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710386-710484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709308-709566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708858-708984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708602-708775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707759-707932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707517-707684:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706969-707019:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706737-706867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706477-706534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706275-706393:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706054-706204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:705809-705972:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:705643-705709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:705403-705513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704868-705110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:704561-704674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:704362-704469:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:703836-703922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:703171-703217:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:702916-703082:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:702089-702252:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:700517-700744:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:700033-700131:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:699652-699729:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:699012-699230:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697792-698066:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:697609-697717:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:696921-697022:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:696411-696543:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:696185-696324:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:695427-695459:-1:exon

LOC101877253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101877253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X2
translation: MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQGPTGYAQDNLHQLHKPMDPLHEKGLSEDPRYGQMKGMGLRPGAHAGMGPPPSPMDQHSQGYPSPLGGSDHASSPVPANGPSSAATMATGPLDGADPQALGGGQQSRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPVPGLQQPMATLPPPAVAGTGPVQGQVQGPGAGPTPPNYSRAHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLANAAAPSSAPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQPPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYSAGSGSGSGSFPHTASTLCLAAELEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKREPDVGSGTAGAGGSAGSTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESDGDDSDEEEEGEEEGSESESRSVKVKIKLGRKEKAPERGKGRRRTSRSARAKPVVSDDDSDEEQEEDRSGSGTEED
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695427..695459,696185..696324,696411..696543,696921..697022,697609..697714,697792..698066,699003..699230,699652..699729,700033..700131,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..711976))
location: region:695427-711976:-1
so has part: feature:711755-711976:-1:exon
so has part: feature:711540-711672:-1:exon
so has part: feature:710708-711100:-1:exon
so has part: feature:710386-710484:-1:exon
so has part: feature:709308-709566:-1:exon
so has part: feature:708858-708984:-1:exon
so has part: feature:708602-708775:-1:exon
so has part: feature:707759-707932:-1:exon
so has part: feature:707517-707684:-1:exon
so has part: feature:706969-707019:-1:exon
so has part: feature:706737-706867:-1:exon
so has part: feature:706477-706534:-1:exon
so has part: feature:706275-706393:-1:exon
so has part: feature:706054-706204:-1:exon
so has part: feature:705809-705972:-1:exon
so has part: feature:705643-705709:-1:exon
so has part: feature:705403-705513:-1:exon
so has part: feature:704868-705110:-1:exon
so has part: feature:704561-704674:-1:exon
so has part: feature:704362-704469:-1:exon
so has part: feature:703836-703922:-1:exon
so has part: feature:703171-703217:-1:exon
so has part: feature:702916-703082:-1:exon
so has part: feature:702089-702252:-1:exon
so has part: feature:700517-700744:-1:exon
so has part: feature:700033-700131:-1:exon
so has part: feature:699652-699729:-1:exon
so has part: feature:699003-699230:-1:exon
so has part: feature:697792-698066:-1:exon
so has part: feature:697609-697714:-1:exon
so has part: feature:696921-697022:-1:exon
so has part: feature:696411-696543:-1:exon
so has part: feature:696185-696324:-1:exon
so has part: feature:695427-695459:-1:exon

XP_033927818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:711755-711976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711540-711672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710708-711100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710386-710484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709308-709566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708858-708984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708602-708775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707759-707932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707517-707684:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706969-707019:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706737-706867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706477-706534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706275-706393:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:706054-706204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:705809-705972:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:705643-705709:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:705403-705513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:704868-705110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:704561-704674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:704362-704469:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:703836-703922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:703171-703217:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:702916-703082:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:702089-702252:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:700517-700744:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:700033-700131:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:699652-699729:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:699003-699230:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697792-698066:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:697609-697714:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:696921-697022:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:696411-696543:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:696185-696324:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:695427-695459:-1:exon

LOC101877253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101877253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X1
translation: MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQGPTGYAQDNLHQLHKPMDPLHEKGLSEDPRYGQMKGMGLRPGAHAGMGPPPSPMDQHSQGYPSPLGGSDHASSPVPANGPSSAATMATGPLDGADPQALGGGQQSRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPVPGLQQPMATLPPPAVAGTGPVQGQVQGPGAGPTPPNYSRAHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLANAAAPSSAPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQPPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYSAGSGSGSGSFPHTASTLCLAAELEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKREPDVGSGTAGAGGSAGSTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESDGDDSDEEEEGEEEGSESESRSVKVKIKLGRKEKAPERGKGRRRTSRSARAKPVVSDDDSDEEQEEDRSGSGTEED
SIO_010081: LOC101877253
subclass of: SO_0000673
so part of: LOC101877253
location: complement(join(695427..695459,696185..696324,696411..696543,696921..697022,697609..697717,697792..698066,699003..699230,699652..699729,700033..700131,700517..700744,702089..702252,702916..703082,703171..703217,703836..703922,704362..704469,704561..704674,704868..705110,705403..705513,705643..705709,705809..705972,706054..706204,706275..706393,706477..706534,706737..706867,706969..707019,707517..707684,707759..707932,708602..708775,708858..708984,709308..709566,710386..710484,710708..711100,711540..711672,711755..711976))
location: region:695427-711976:-1
so has part: feature:711755-711976:-1:exon
so has part: feature:711540-711672:-1:exon
so has part: feature:710708-711100:-1:exon
so has part: feature:710386-710484:-1:exon
so has part: feature:709308-709566:-1:exon
so has part: feature:708858-708984:-1:exon
so has part: feature:708602-708775:-1:exon
so has part: feature:707759-707932:-1:exon
so has part: feature:707517-707684:-1:exon
so has part: feature:706969-707019:-1:exon
so has part: feature:706737-706867:-1:exon
so has part: feature:706477-706534:-1:exon
so has part: feature:706275-706393:-1:exon
so has part: feature:706054-706204:-1:exon
so has part: feature:705809-705972:-1:exon
so has part: feature:705643-705709:-1:exon
so has part: feature:705403-705513:-1:exon
so has part: feature:704868-705110:-1:exon
so has part: feature:704561-704674:-1:exon
so has part: feature:704362-704469:-1:exon
so has part: feature:703836-703922:-1:exon
so has part: feature:703171-703217:-1:exon
so has part: feature:702916-703082:-1:exon
so has part: feature:702089-702252:-1:exon
so has part: feature:700517-700744:-1:exon
so has part: feature:700033-700131:-1:exon
so has part: feature:699652-699729:-1:exon
so has part: feature:699003-699230:-1:exon
so has part: feature:697792-698066:-1:exon
so has part: feature:697609-697717:-1:exon
so has part: feature:696921-697022:-1:exon
so has part: feature:696411-696543:-1:exon
so has part: feature:696185-696324:-1:exon
so has part: feature:695427-695459:-1:exon

XP_033927817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:711755-711976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711540-711672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:710708-711100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710386-710484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709308-709566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708858-708984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708602-708775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:707759-707932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:707517-707684:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:706969-707019:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706737-706867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706477-706534:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706275-706393:-1:exon