Melopsittacus undulatus isolate bMelUnd1 chromosome 13, bMelUnd1.mat.Z, whole genome shotgun sequence.
type: Entry
definition: Melopsittacus undulatus isolate bMelUnd1 chromosome 13, bMelUnd1.mat.Z, whole genome shotgun sequence.
sequence version: NC_047539.1
sequence date: 2020-05-06
sequence: sequence
division: CON
label: NC_047539.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA629576
dblink: SAMN12623090
keyword: WGS
keyword: RefSeq
source: Melopsittacus undulatus (budgerigar)
organism: Melopsittacus undulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittaculidae; Melopsittacus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022644.1.\nAssembly name: bMelUnd1.mat.Z\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the G10K on 2020/04/13. The\noriginal whole-genome shotgun project has the accession\nJAAVWG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: G10K\nAssembly Date :: 24-FEB-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; Freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-02-24; VGP assembly\n pipeline v. 1.6\nAssembly Name :: bMelUnd1.mat.Z\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 61.11x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Melopsittacus undulatus Annotation\n Release 104\nAnnotation Version :: 104\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 12147643
topology: linear
so has quality: SO_0000987
location: 1..12147643
location: region:1-12147643:1
RO_0002162: 13146

NC_047539
type: RefSeq
SIO_000068: refseq

PRJNA629576
type: BioProject
SIO_000068: bioproject

SAMN12623090
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12147643:1
position: 12147643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-12147643:1:source
so part of: sequence
organism: Melopsittacus undulatus
mol type: genomic DNA
isolate: bMelUnd1
chromosome: 13
sex: female
tissue type: blood
dev stage: juvenile
country: USA: New Mexico State University
lat lon: 32.278282 N 106.74994 W
collection date: 02-Nov-2018
collected by: Timothy Wright, Justin Apodaca

13146
type: Taxonomy
SIO_000068: taxonomy

LOC117436890
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117436890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8631..14942
location: region:8631-14942:1
so has part: feature:8631-14942:1:exon
subclass of: SO_0000010

117436890
type: Gene
SIO_000068: ncbigene

position:8631:1
position: 8631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14942:1
position: 14942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8631-14942:1:exon

LOC117436890
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550223.1
SIO_010081: LOC117436890
so part of: LOC117436890
location: join(8631..8979,11781..11928,13930..14044,14881..14942)
location: region:8631-14942:1
so has part: feature:8631-8979:1:exon
so has part: feature:11781-11928:1:exon
so has part: feature:13930-14044:1:exon
so has part: feature:14881-14942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8631-8979:1:exon

position:8979:1
position: 8979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11781-11928:1:exon

position:11781:1
position: 11781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11928:1
position: 11928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13930-14044:1:exon

position:13930:1
position: 13930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14044:1
position: 14044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14881-14942:1:exon

position:14881:1
position: 14881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117436890
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550224.1
SIO_010081: LOC117436890
so part of: LOC117436890
location: join(8632..8979,11786..11928,13930..14044,14881..14942)
location: region:8632-14942:1
so has part: feature:8632-8979:1:exon
so has part: feature:11786-11928:1:exon
so has part: feature:13930-14044:1:exon
so has part: feature:14881-14942:1:exon

position:8632:1
position: 8632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8632-8979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11786-11928:1:exon

position:11786:1
position: 11786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13930-14044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14881-14942:1:exon

LOC117436890
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550221.1
SIO_010081: LOC117436890
so part of: LOC117436890
location: join(9797..10764,11781..11928,13930..14044,14881..14942)
location: region:9797-14942:1
so has part: feature:9797-10764:1:exon
so has part: feature:11781-11928:1:exon
so has part: feature:13930-14044:1:exon
so has part: feature:14881-14942:1:exon

position:9797:1
position: 9797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9797-10764:1:exon

position:10764:1
position: 10764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11781-11928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13930-14044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14881-14942:1:exon

LOC117436890
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550219.1
SIO_010081: LOC117436890
so part of: LOC117436890
location: join(9797..10764,11786..11928,13930..14044,14881..14942)
location: region:9797-14942:1
so has part: feature:9797-10764:1:exon
so has part: feature:11786-11928:1:exon
so has part: feature:13930-14044:1:exon
so has part: feature:14881-14942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9797-10764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11786-11928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13930-14044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14881-14942:1:exon

LOC117436890
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004550220.1
SIO_010081: LOC117436890
so part of: LOC117436890
location: join(9797..10593,10674..10764,11781..11928,13930..14044,14881..14942)
location: region:9797-14942:1
so has part: feature:9797-10593:1:exon
so has part: feature:10674-10764:1:exon
so has part: feature:11781-11928:1:exon
so has part: feature:13930-14044:1:exon
so has part: feature:14881-14942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9797-10593:1:exon

position:10593:1
position: 10593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10674-10764:1:exon

position:10674:1
position: 10674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11781-11928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13930-14044:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14881-14942:1:exon

LOC117436890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068901.1
SIO_010081: LOC117436890
subclass of: SO_0000673
so part of: LOC117436890
location: join(9797..10764,11781..11928,12940..13133)
location: region:9797-13133:1
so has part: feature:9797-10764:1:exon
so has part: feature:11781-11928:1:exon
so has part: feature:12940-13133:1:exon

position:13133:1
position: 13133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9797-10764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11781-11928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12940-13133:1:exon

position:12940:1
position: 12940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117436890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034068903.1
SIO_010081: LOC117436890
subclass of: SO_0000673
so part of: LOC117436890
location: join(9797..10593,10634..10764,11781..11928,12940..13133)
location: region:9797-13133:1
so has part: feature:9797-10593:1:exon
so has part: feature:10634-10764:1:exon
so has part: feature:11781-11928:1:exon
so has part: feature:12940-13133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9797-10593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10634-10764:1:exon

position:10634:1
position: 10634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11781-11928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12940-13133:1:exon

LOC117436890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034068902.1
SIO_010081: LOC117436890
subclass of: SO_0000673
so part of: LOC117436890
location: join(9797..10593,10634..10764,11786..11928,12940..13133)
location: region:9797-13133:1
so has part: feature:9797-10593:1:exon
so has part: feature:10634-10764:1:exon
so has part: feature:11786-11928:1:exon
so has part: feature:12940-13133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9797-10593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10634-10764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11786-11928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12940-13133:1:exon

LOC117436890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034068905.1
SIO_010081: LOC117436890
subclass of: SO_0000673
so part of: LOC117436890
location: join(9797..10593,10674..10764,11786..11928,12940..13133)
location: region:9797-13133:1
so has part: feature:9797-10593:1:exon
so has part: feature:10674-10764:1:exon
so has part: feature:11786-11928:1:exon
so has part: feature:12940-13133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9797-10593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10674-10764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11786-11928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12940-13133:1:exon

LOC117436890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068904.1
SIO_010081: LOC117436890
subclass of: SO_0000673
so part of: LOC117436890
location: join(9797..10764,11786..11928,12940..13128)
location: region:9797-13128:1
so has part: feature:9797-10764:1:exon
so has part: feature:11786-11928:1:exon
so has part: feature:12940-13128:1:exon

position:13128:1
position: 13128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9797-10764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11786-11928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12940-13128:1:exon

LOC117436890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117436890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like isoform X1
translation: MAAQSRAPPQPPPSPLLTAPAPAPLSAPPPWPPYGGGRGGEGREGAGGGREPSGSGRSRHLPLPPPPGTAQPGSARHGSARPRVEPGHRGGLGQAGSRRGAVAGGRRCCPGLQRGPCPPSHPSCRRHSCSPRPLRVTVSTATAAAAAPGHGLHGNSCCRRSGSRSPRQQLLPPLLHGLGIHLLHGATTVVFGSSVQPCAHCVCQNRPFQELQKTFLASFFHLQDQKGKRGFCNWEAGEESGGPRFPLDIWVLPAEFAALGVVFVELGPALLRRRQGLEGGRENQEQVSPSIFL
SIO_010081: LOC117436890
subclass of: SO_0000673
so part of: LOC117436890
location: join(10189..10764,11781..11928,12940..13097)
location: region:10189-13097:1
so has part: feature:10189-10764:1:exon
so has part: feature:11781-11928:1:exon
so has part: feature:12940-13097:1:exon

XP_033924792.1
type: Protein
SIO_000068: ncbiprotein

position:10189:1
position: 10189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13097:1
position: 13097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10189-10764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11781-11928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12940-13097:1:exon

LOC117436890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117436890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like isoform X2
translation: MAAQSRAPPQPPPSPLLTAPAPAPLSAPPPWPPYGGGRGGEGREGAGGGREPSGSGRSRHLPLPPPPGTAQPGSARHGSARPRVEPGHRGGLGQAGSRRGAVAGGRRCCPGLQRGPCPPSHPSCRRHSCSPRPLRVTVSTATAAAAAPGHGLHGNSCCRRCCTDSASTSCTAPPPWSLGVQPCAHCVCQNRPFQELQKTFLASFFHLQDQKGKRGFCNWEAGEESGGPRFPLDIWVLPAEFAALGVVFVELGPALLRRRQGLEGGRENQEQVSPSIFL
SIO_010081: LOC117436890
subclass of: SO_0000673
so part of: LOC117436890
location: join(10189..10593,10634..10764,11786..11928,12940..13097)
location: region:10189-13097:1
so has part: feature:10189-10593:1:exon
so has part: feature:10634-10764:1:exon
so has part: feature:11786-11928:1:exon
so has part: feature:12940-13097:1:exon

XP_033924793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10189-10593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10634-10764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11786-11928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12940-13097:1:exon

LOC117436890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117436890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like isoform X4
translation: MAAQSRAPPQPPPSPLLTAPAPAPLSAPPPWPPYGGGRGGEGREGAGGGREPSGSGRSRHLPLPPPPGTAQPGSARHGSARPRVEPGHRGGLGQAGSRRGAVAGGRRCCPGLQRGPCPPSHPSCRRHSCSPRPLRVTVSTATAAAAAPGHGLHGNSCCRRSGSRSPRQQLLPPLLHGLGIHLLHGATTVVFGRAAMCTLCVPEQTLSRAPEDFFSLFLSSARPKRKERFLQLGSRRRERRSPVSS
SIO_010081: LOC117436890
subclass of: SO_0000673
so part of: LOC117436890
location: join(10189..10764,11786..11928,12940..12958)
location: region:10189-12958:1
so has part: feature:10189-10764:1:exon
so has part: feature:11786-11928:1:exon
so has part: feature:12940-12958:1:exon

XP_033924795.1
type: Protein
SIO_000068: ncbiprotein

position:12958:1
position: 12958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10189-10764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11786-11928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12940-12958:1:exon

LOC117436890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117436890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117436890 isoform X3
translation: MAALWRRAGRGGAGGGRRRKGTEWFREEPTPPIAPPAGHGSARIGTARLGSAQGRTGAPRGSGAGRQPEGGSRGGAALLSRPAAGTVSPFPSLLPEALVFPAAAPGHGLHGNSCCRRSGSRSPRQQLLPPLLHGLGIHLLHGATTVVFGSSVQPCAHCVCQNRPFQELQKTFLASFFHLQDQKGKRGFCNWEAGEESGGPRFPLDIWVLPAEFAALGVVFVELGPALLRRRQGLEGGRENQEQVSPSIFL
SIO_010081: LOC117436890
subclass of: SO_0000673
so part of: LOC117436890
location: join(10278..10593,10634..10764,11781..11928,12940..13097)
location: region:10278-13097:1
so has part: feature:10278-10593:1:exon
so has part: feature:10634-10764:1:exon
so has part: feature:11781-11928:1:exon
so has part: feature:12940-13097:1:exon

XP_033924794.1
type: Protein
SIO_000068: ncbiprotein

position:10278:1
position: 10278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10278-10593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10634-10764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11781-11928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12940-13097:1:exon

LOC117436890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117436890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117436890 isoform X5
translation: MAALWRRAGRGGAGGGRRRKGTEWFREEPTPPIAPPAGHGSARIGTARLGSAQGRTGAPRGSGAGRQPEGGSRGGAALLSRPAAGTVSPFPSLLPEALVFPAAAPGHGLHGNSCCRRCCTDSASTSCTAPPPWSLGVQPCAHCVCQNRPFQELQKTFLASFFHLQDQKGKRGFCNWEAGEESGGPRFPLDIWVLPAEFAALGVVFVELGPALLRRRQGLEGGRENQEQVSPSIFL
SIO_010081: LOC117436890
subclass of: SO_0000673
so part of: LOC117436890
location: join(10278..10593,10674..10764,11786..11928,12940..13097)
location: region:10278-13097:1
so has part: feature:10278-10593:1:exon
so has part: feature:10674-10764:1:exon
so has part: feature:11786-11928:1:exon
so has part: feature:12940-13097:1:exon

XP_033924796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10278-10593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10674-10764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11786-11928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12940-13097:1:exon

LOC117436890
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550222.1
SIO_010081: LOC117436890
so part of: LOC117436890
location: join(10784..11171,11781..11928,13930..14044,14881..14942)
location: region:10784-14942:1
so has part: feature:10784-11171:1:exon
so has part: feature:11781-11928:1:exon
so has part: feature:13930-14044:1:exon
so has part: feature:14881-14942:1:exon

position:10784:1
position: 10784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10784-11171:1:exon

position:11171:1
position: 11171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11781-11928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13930-14044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14881-14942:1:exon

LOC117436890
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC117436890
product: translation initiation factor IF-2-like, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550225.1
SIO_010081: LOC117436890
so part of: LOC117436890
location: join(10784..11171,11786..11928,13930..14044,14881..14942)
location: region:10784-14942:1
so has part: feature:10784-11171:1:exon
so has part: feature:11786-11928:1:exon
so has part: feature:13930-14044:1:exon
so has part: feature:14881-14942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10784-11171:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11786-11928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13930-14044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14881-14942:1:exon

LOC117436941
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117436941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15535..23016
location: region:15535-23016:1
so has part: feature:15535-23016:1:exon
subclass of: SO_0000011

117436941
type: Gene
SIO_000068: ncbigene

position:15535:1
position: 15535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23016:1
position: 23016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15535-23016:1:exon

LOC117436941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117436941
product: uncharacterized LOC117436941, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004550234.1
SIO_010081: LOC117436941
subclass of: SO_0000673
so part of: LOC117436941
location: join(15535..15570,18806..18902,19277..19401,19621..19740,22521..23016)
location: region:15535-23016:1
so has part: feature:15535-15570:1:exon
so has part: feature:18806-18902:1:exon
so has part: feature:19277-19401:1:exon
so has part: feature:19621-19740:1:exon
so has part: feature:22521-23016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15535-15570:1:exon

position:15570:1
position: 15570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18806-18902:1:exon

position:18806:1
position: 18806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18902:1
position: 18902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19277-19401:1:exon

position:19277:1
position: 19277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19401:1
position: 19401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19621-19740:1:exon

position:19621:1
position: 19621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19740:1
position: 19740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22521-23016:1:exon

position:22521:1
position: 22521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117436941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117436941
product: uncharacterized LOC117436941, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550232.1
SIO_010081: LOC117436941
subclass of: SO_0000673
so part of: LOC117436941
location: join(17921..18107,18806..18902,19277..19401,19621..19740,22521..23016)
location: region:17921-23016:1
so has part: feature:17921-18107:1:exon
so has part: feature:18806-18902:1:exon
so has part: feature:19277-19401:1:exon
so has part: feature:19621-19740:1:exon
so has part: feature:22521-23016:1:exon

position:17921:1
position: 17921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17921-18107:1:exon

position:18107:1
position: 18107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18806-18902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19277-19401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19621-19740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22521-23016:1:exon

LOC117436941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117436941
product: uncharacterized LOC117436941, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550233.1
SIO_010081: LOC117436941
subclass of: SO_0000673
so part of: LOC117436941
location: join(18171..18663,18806..18902,19277..19401,19621..19740,22521..23016)
location: region:18171-23016:1
so has part: feature:18171-18663:1:exon
so has part: feature:18806-18902:1:exon
so has part: feature:19277-19401:1:exon
so has part: feature:19621-19740:1:exon
so has part: feature:22521-23016:1:exon

position:18171:1
position: 18171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18171-18663:1:exon

position:18663:1
position: 18663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:18806-18902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19277-19401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19621-19740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22521-23016:1:exon

LOC117436941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117436941
product: uncharacterized LOC117436941, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004550231.1
SIO_010081: LOC117436941
subclass of: SO_0000673
so part of: LOC117436941
location: join(18736..18902,19277..19401,19621..19740,22521..23016)
location: region:18736-23016:1
so has part: feature:18736-18902:1:exon
so has part: feature:19277-19401:1:exon
so has part: feature:19621-19740:1:exon
so has part: feature:22521-23016:1:exon

position:18736:1
position: 18736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18736-18902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19277-19401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19621-19740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22521-23016:1:exon

LOC117436880
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117436880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(25971..36763)
location: region:25971-36763:-1
so has part: feature:25971-36763:-1:exon
subclass of: SO_0000010

117436880
type: Gene
SIO_000068: ncbigene

position:25971:-1
position: 25971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36763:-1
position: 36763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25971-36763:-1:exon

LOC117436880
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC117436880
product: integrator complex subunit 7-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004550213.1
SIO_010081: LOC117436880
so part of: LOC117436880
location: complement(join(25971..30089,30450..30564,30998..31120,32650..32846,33756..33802,34283..34420,34633..34780,35569..35698,35901..36075))
location: region:25971-36075:-1
so has part: feature:35901-36075:-1:exon
so has part: feature:35569-35698:-1:exon
so has part: feature:34633-34780:-1:exon
so has part: feature:34283-34420:-1:exon
so has part: feature:33756-33802:-1:exon
so has part: feature:32650-32846:-1:exon
so has part: feature:30998-31120:-1:exon
so has part: feature:30450-30564:-1:exon
so has part: feature:25971-30089:-1:exon

position:36075:-1
position: 36075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35901-36075:-1:exon

position:35901:-1
position: 35901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35569-35698:-1:exon

position:35569:-1
position: 35569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35698:-1
position: 35698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34633-34780:-1:exon

position:34633:-1
position: 34633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34780:-1
position: 34780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:34283-34420:-1:exon

position:34283:-1
position: 34283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34420:-1
position: 34420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33756-33802:-1:exon

position:33756:-1
position: 33756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33802:-1
position: 33802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:32650-32846:-1:exon

position:32650:-1
position: 32650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32846:-1
position: 32846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:30998-31120:-1:exon

position:30998:-1
position: 30998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31120:-1
position: 31120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:30450-30564:-1:exon

position:30450:-1
position: 30450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30564:-1
position: 30564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:25971-30089:-1:exon

position:30089:-1
position: 30089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117436880
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC117436880
product: integrator complex subunit 7-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004550212.1
SIO_010081: LOC117436880
so part of: LOC117436880
location: complement(join(25971..30106,30450..30564,30998..31120,32650..32846,33756..33802,34283..34420,34633..34780,35569..35698,35901..36074))
location: region:25971-36074:-1
so has part: feature:35901-36074:-1:exon
so has part: feature:35569-35698:-1:exon
so has part: feature:34633-34780:-1:exon
so has part: feature:34283-34420:-1:exon
so has part: feature:33756-33802:-1:exon
so has part: feature:32650-32846:-1:exon
so has part: feature:30998-31120:-1:exon
so has part: feature:30450-30564:-1:exon
so has part: feature:25971-30106:-1:exon

position:36074:-1
position: 36074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35901-36074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35569-35698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34633-34780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34283-34420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33756-33802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32650-32846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30998-31120:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:30450-30564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25971-30106:-1:exon

position:30106:-1
position: 30106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117436881
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117436881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 29480..31636
location: region:29480-31636:1
so has part: feature:29480-31636:1:exon
subclass of: SO_0000011

117436881
type: Gene
SIO_000068: ncbigene

position:29480:1
position: 29480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31636:1
position: 31636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29480-31636:1:exon

LOC117436881
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117436881
product: uncharacterized LOC117436881
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004550214.1
SIO_010081: LOC117436881
subclass of: SO_0000673
so part of: LOC117436881
location: join(29480..30192,30979..31636)
location: region:29480-31636:1
so has part: feature:29480-30192:1:exon
so has part: feature:30979-31636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29480-30192:1:exon

position:30192:1
position: 30192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30979-31636:1:exon

position:30979:1
position: 30979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117436880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117436880
product: integrator complex subunit 7-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034068824.1
SIO_010081: LOC117436880
subclass of: SO_0000673
so part of: LOC117436880
location: complement(join(30571..31120,32650..32846,33756..33802,34283..34420,34633..34780,35569..35698,36745..36763))
location: region:30571-36763:-1
so has part: feature:36745-36763:-1:exon
so has part: feature:35569-35698:-1:exon
so has part: feature:34633-34780:-1:exon
so has part: feature:34283-34420:-1:exon
so has part: feature:33756-33802:-1:exon
so has part: feature:32650-32846:-1:exon
so has part: feature:30571-31120:-1:exon

position:30571:-1
position: 30571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36745-36763:-1:exon

position:36745:-1
position: 36745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35569-35698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34633-34780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34283-34420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33756-33802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32650-32846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30571-31120:-1:exon

LOC117436880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117436880
product: integrator complex subunit 7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068822.1
SIO_010081: LOC117436880
subclass of: SO_0000673
so part of: LOC117436880
location: complement(join(30571..31120,32650..32846,33756..33802,34283..34420,34633..34780,35569..35698,35901..36073))
location: region:30571-36073:-1
so has part: feature:35901-36073:-1:exon
so has part: feature:35569-35698:-1:exon
so has part: feature:34633-34780:-1:exon
so has part: feature:34283-34420:-1:exon
so has part: feature:33756-33802:-1:exon
so has part: feature:32650-32846:-1:exon
so has part: feature:30571-31120:-1:exon

position:36073:-1
position: 36073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35901-36073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35569-35698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34633-34780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34283-34420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33756-33802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32650-32846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30571-31120:-1:exon

LOC117436880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117436880
product: integrator complex subunit 7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068823.1
SIO_010081: LOC117436880
subclass of: SO_0000673
so part of: LOC117436880
location: complement(join(30571..31120,32650..32846,33756..33802,34283..34420,34633..34780,35569..36073))
location: region:30571-36073:-1
so has part: feature:35569-36073:-1:exon
so has part: feature:34633-34780:-1:exon
so has part: feature:34283-34420:-1:exon
so has part: feature:33756-33802:-1:exon
so has part: feature:32650-32846:-1:exon
so has part: feature:30571-31120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35569-36073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34633-34780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34283-34420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33756-33802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32650-32846:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30571-31120:-1:exon

LOC117436880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117436880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 7-like
translation: MLGSMASVIPERKNAHHSIRQSLDSHDNVEVEAAIFAAANFSAQSKDFAAGVCNKISEMRQGLATPVDLLKLIPILQHMHHDASLASSSRQLLQQLVTSYPSTKMVIVTLHTFTLLAASSLVDIPKQIQLLLQYLKNDPRKAVKRLAIQDLKLLANKTPHTWSRENIQVDAFF
SIO_010081: LOC117436880
subclass of: SO_0000673
so part of: LOC117436880
location: complement(join(30980..31120,32650..32846,33756..33802,34283..34419))
location: region:30980-34419:-1
so has part: feature:34283-34419:-1:exon
so has part: feature:33756-33802:-1:exon
so has part: feature:32650-32846:-1:exon
so has part: feature:30980-31120:-1:exon

XP_033924713.1
type: Protein
SIO_000068: ncbiprotein

position:30980:-1
position: 30980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34419:-1
position: 34419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34283-34419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33756-33802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32650-32846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30980-31120:-1:exon

LOC117436880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117436880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 7-like
translation: MLGSMASVIPERKNAHHSIRQSLDSHDNVEVEAAIFAAANFSAQSKDFAAGVCNKISEMRQGLATPVDLLKLIPILQHMHHDASLASSSRQLLQQLVTSYPSTKMVIVTLHTFTLLAASSLVDIPKQIQLLLQYLKNDPRKAVKRLAIQDLKLLANKTPHTWSRENIQVDAFF
SIO_010081: LOC117436880
subclass of: SO_0000673
so part of: LOC117436880
location: complement(join(30980..31120,32650..32846,33756..33802,34283..34419))
location: region:30980-34419:-1
so has part: feature:34283-34419:-1:exon
so has part: feature:33756-33802:-1:exon
so has part: feature:32650-32846:-1:exon
so has part: feature:30980-31120:-1:exon

XP_033924714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34283-34419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33756-33802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32650-32846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30980-31120:-1:exon

LOC117436880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117436880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 7-like
translation: MLGSMASVIPERKNAHHSIRQSLDSHDNVEVEAAIFAAANFSAQSKDFAAGVCNKISEMRQGLATPVDLLKLIPILQHMHHDASLASSSRQLLQQLVTSYPSTKMVIVTLHTFTLLAASSLVDIPKQIQLLLQYLKNDPRKAVKRLAIQDLKLLANKTPHTWSRENIQVDAFF
SIO_010081: LOC117436880
subclass of: SO_0000673
so part of: LOC117436880
location: complement(join(30980..31120,32650..32846,33756..33802,34283..34419))
location: region:30980-34419:-1
so has part: feature:34283-34419:-1:exon
so has part: feature:33756-33802:-1:exon
so has part: feature:32650-32846:-1:exon
so has part: feature:30980-31120:-1:exon

XP_033924715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34283-34419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33756-33802:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32650-32846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30980-31120:-1:exon

LOC101870635
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101870635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(37995..39580)
location: region:37995-39580:-1
so has part: feature:37995-39580:-1:exon
subclass of: SO_0000010

101870635
type: Gene
SIO_000068: ncbigene

position:37995:-1
position: 37995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39580:-1
position: 39580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37995-39580:-1:exon

LOC101870635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101870635
product: MIS12 kinetochore complex component, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031055121.1
SIO_010081: LOC101870635
subclass of: SO_0000673
so part of: LOC101870635
location: complement(join(37995..39409,39539..39580))
location: region:37995-39580:-1
so has part: feature:39539-39580:-1:exon
so has part: feature:37995-39409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39539-39580:-1:exon

position:39539:-1
position: 39539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37995-39409:-1:exon

position:39409:-1
position: 39409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101870635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101870635
product: MIS12 kinetochore complex component, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031055122.1
SIO_010081: LOC101870635
subclass of: SO_0000673
so part of: LOC101870635
location: complement(join(37995..39409,39519..39575))
location: region:37995-39575:-1
so has part: feature:39519-39575:-1:exon
so has part: feature:37995-39409:-1:exon

position:39575:-1
position: 39575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39519-39575:-1:exon

position:39519:-1
position: 39519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37995-39409:-1:exon

LOC101870635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101870635
product: MIS12 kinetochore complex component, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005141386.2
SIO_010081: LOC101870635
subclass of: SO_0000673
so part of: LOC101870635
location: complement(join(37995..39406,39515..39573))
location: region:37995-39573:-1
so has part: feature:39515-39573:-1:exon
so has part: feature:37995-39406:-1:exon

position:39573:-1
position: 39573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39515-39573:-1:exon

position:39515:-1
position: 39515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37995-39406:-1:exon

position:39406:-1
position: 39406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101870635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101870635
product: MIS12 kinetochore complex component, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031055120.1
SIO_010081: LOC101870635
subclass of: SO_0000673
so part of: LOC101870635
location: complement(join(37995..39409,39515..39573))
location: region:37995-39573:-1
so has part: feature:39515-39573:-1:exon
so has part: feature:37995-39409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39515-39573:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37995-39409:-1:exon

LOC101870635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101870635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MIS12 homolog
translation: MAINPMTYEAQFFGFTPQTFIQRLYTACQDCIFDAMLQVETVILKKLEELPECGISPLHIRRGTEKFLLFLTENFNELFGKMEEMLLQLVLNIPKNVLLPEDKVHKQYPYSKEQVQALQDEIHQLQEQYRAEVCAGQVLRAELEEQEIVRAELEKILQCCVEFENICREHWNCSFGESFAFLTPRVKKLQDALKNVKQKSKKLKKCDTES
SIO_010081: LOC101870635
subclass of: SO_0000673
so part of: LOC101870635
location: complement(38733..39365)
location: region:38733-39365:-1
so has part: feature:38733-39365:-1:exon

XP_030910980.1
type: Protein
SIO_000068: ncbiprotein

position:38733:-1
position: 38733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39365:-1
position: 39365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38733-39365:-1:exon

LOC101870635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101870635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MIS12 homolog
translation: MAINPMTYEAQFFGFTPQTFIQRLYTACQDCIFDAMLQVETVILKKLEELPECGISPLHIRRGTEKFLLFLTENFNELFGKMEEMLLQLVLNIPKNVLLPEDKVHKQYPYSKEQVQALQDEIHQLQEQYRAEVCAGQVLRAELEEQEIVRAELEKILQCCVEFENICREHWNCSFGESFAFLTPRVKKLQDALKNVKQKSKKLKKCDTES
SIO_010081: LOC101870635
subclass of: SO_0000673
so part of: LOC101870635
location: complement(38733..39365)
location: region:38733-39365:-1
so has part: feature:38733-39365:-1:exon

XP_030910981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38733-39365:-1:exon

LOC101870635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101870635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MIS12 homolog
translation: MAINPMTYEAQFFGFTPQTFIQRLYTACQDCIFDAMLQVETVILKKLEELPECGISPLHIRRGTEKFLLFLTENFNELFGKMEEMLLQLVLNIPKNVLLPEDKVHKQYPYSKEQVQALQDEIHQLQEQYRAEVCAGQVLRAELEEQEIVRAELEKILQCCVEFENICREHWNCSFGESFAFLTPRVKKLQDALKNVKQKSKKLKKCDTES
SIO_010081: LOC101870635
subclass of: SO_0000673
so part of: LOC101870635
location: complement(38733..39365)
location: region:38733-39365:-1
so has part: feature:38733-39365:-1:exon

XP_030910982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38733-39365:-1:exon

LOC101870635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101870635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MIS12 homolog
translation: MAINPMTYEAQFFGFTPQTFIQRLYTACQDCIFDAMLQVETVILKKLEELPECGISPLHIRRGTEKFLLFLTENFNELFGKMEEMLLQLVLNIPKNVLLPEDKVHKQYPYSKEQVQALQDEIHQLQEQYRAEVCAGQVLRAELEEQEIVRAELEKILQCCVEFENICREHWNCSFGESFAFLTPRVKKLQDALKNVKQKSKKLKKCDTES
SIO_010081: LOC101870635
subclass of: SO_0000673
so part of: LOC101870635
location: complement(38733..39365)
location: region:38733-39365:-1
so has part: feature:38733-39365:-1:exon

XP_005141443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38733-39365:-1:exon

LOC101868450
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 39760..45218
location: region:39760-45218:1
so has part: feature:39760-45218:1:exon
subclass of: SO_0000010

101868450
type: Gene
SIO_000068: ncbigene

position:39760:1
position: 39760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45218:1
position: 45218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39760-45218:1:exon

LOC101868450
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868450
product: derlin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005141373.3
SIO_010081: LOC101868450
subclass of: SO_0000673
so part of: LOC101868450
location: join(39760..39871,40223..40288,40540..40613,41062..41155,41657..41852,42373..42463,43694..45218)
location: region:39760-45218:1
so has part: feature:39760-39871:1:exon
so has part: feature:40223-40288:1:exon
so has part: feature:40540-40613:1:exon
so has part: feature:41062-41155:1:exon
so has part: feature:41657-41852:1:exon
so has part: feature:42373-42463:1:exon
so has part: feature:43694-45218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39760-39871:1:exon

position:39871:1
position: 39871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40223-40288:1:exon

position:40223:1
position: 40223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40288:1
position: 40288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:40540-40613:1:exon

position:40540:1
position: 40540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40613:1
position: 40613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:41062-41155:1:exon

position:41062:1
position: 41062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41155:1
position: 41155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:41657-41852:1:exon

position:41657:1
position: 41657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41852:1
position: 41852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:42373-42463:1:exon

position:42373:1
position: 42373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42463:1
position: 42463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:43694-45218:1:exon

position:43694:1
position: 43694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: derlin-2
translation: MAYQTFRQEYLQVPPVTRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQVWRLITNYLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGLLMTLFGLFVNLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLIFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGGKLLRTPSVLKAIFDTPEDDPNYNLLPEDRPGGFAWGEGQRLGG
SIO_010081: LOC101868450
subclass of: SO_0000673
so part of: LOC101868450
location: join(39779..39871,40223..40288,40540..40613,41062..41155,41657..41852,42373..42463,43694..43799)
location: region:39779-43799:1
so has part: feature:39779-39871:1:exon
so has part: feature:40223-40288:1:exon
so has part: feature:40540-40613:1:exon
so has part: feature:41062-41155:1:exon
so has part: feature:41657-41852:1:exon
so has part: feature:42373-42463:1:exon
so has part: feature:43694-43799:1:exon

XP_005141430.1
type: Protein
SIO_000068: ncbiprotein

position:39779:1
position: 39779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43799:1
position: 43799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39779-39871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40223-40288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:40540-40613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41062-41155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41657-41852:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42373-42463:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43694-43799:1:exon

LOC101868288
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 45477..55539
location: region:45477-55539:1
so has part: feature:45477-55539:1:exon
subclass of: SO_0000010

101868288
type: Gene
SIO_000068: ncbigene

position:45477:1
position: 45477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55539:1
position: 55539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45477-55539:1:exon

LOC101868288
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868288
product: DEAH-box helicase 33, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005141372.3
SIO_010081: LOC101868288
subclass of: SO_0000673
so part of: LOC101868288
location: join(45477..45540,46186..46785,46945..47105,47802..48029,48670..48840,49566..49751,50437..50548,50931..51090,51505..51593,52146..52273,52834..53037,53742..53828,54851..55539)
location: region:45477-55539:1
so has part: feature:45477-45540:1:exon
so has part: feature:46186-46785:1:exon
so has part: feature:46945-47105:1:exon
so has part: feature:47802-48029:1:exon
so has part: feature:48670-48840:1:exon
so has part: feature:49566-49751:1:exon
so has part: feature:50437-50548:1:exon
so has part: feature:50931-51090:1:exon
so has part: feature:51505-51593:1:exon
so has part: feature:52146-52273:1:exon
so has part: feature:52834-53037:1:exon
so has part: feature:53742-53828:1:exon
so has part: feature:54851-55539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45477-45540:1:exon

position:45540:1
position: 45540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46186-46785:1:exon

position:46186:1
position: 46186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46785:1
position: 46785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46945-47105:1:exon

position:46945:1
position: 46945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47105:1
position: 47105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:47802-48029:1:exon

position:47802:1
position: 47802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48029:1
position: 48029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:48670-48840:1:exon

position:48670:1
position: 48670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48840:1
position: 48840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:49566-49751:1:exon

position:49566:1
position: 49566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49751:1
position: 49751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50437-50548:1:exon

position:50437:1
position: 50437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50548:1
position: 50548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:50931-51090:1:exon

position:50931:1
position: 50931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51090:1
position: 51090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:51505-51593:1:exon

position:51505:1
position: 51505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51593:1
position: 51593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:52146-52273:1:exon

position:52146:1
position: 52146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52273:1
position: 52273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:52834-53037:1:exon

position:52834:1
position: 52834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53037:1
position: 53037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:53742-53828:1:exon

position:53742:1
position: 53742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53828:1
position: 53828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:54851-55539:1:exon

position:54851:1
position: 54851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868288
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868288
product: DEAH-box helicase 33, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031055129.2
SIO_010081: LOC101868288
subclass of: SO_0000673
so part of: LOC101868288
location: join(45630..46785,46945..47105,47802..48029,48670..48840,49566..49751,50437..50548,50931..51090,51505..51593,52146..52273,52834..53037,53742..53828,54811..55539)
location: region:45630-55539:1
so has part: feature:45630-46785:1:exon
so has part: feature:46945-47105:1:exon
so has part: feature:47802-48029:1:exon
so has part: feature:48670-48840:1:exon
so has part: feature:49566-49751:1:exon
so has part: feature:50437-50548:1:exon
so has part: feature:50931-51090:1:exon
so has part: feature:51505-51593:1:exon
so has part: feature:52146-52273:1:exon
so has part: feature:52834-53037:1:exon
so has part: feature:53742-53828:1:exon
so has part: feature:54811-55539:1:exon

position:45630:1
position: 45630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45630-46785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46945-47105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47802-48029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48670-48840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49566-49751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50437-50548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50931-51090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51505-51593:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:52146-52273:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52834-53037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53742-53828:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:54811-55539:1:exon

position:54811:1
position: 54811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868288
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DHX33 isoform X1
translation: MADQSLDHLCGSSLDSSACPPLCRVGTSNEHSIPGAAWQVPSTASCQQLVNGNAVGGKPASLRHSLQILGGLGSAGRVSPRQPLPAPCPAMAPWALHCTSQQAPLRQPVTPACARSQRKGAVPGPAGAMRLPGEGPPAKRPKAVLPAQPAVQPRGPPPVEQQRRSLPIFPVRGRLLGHVRGLDSAVVIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRRVAAIALATRVSDEKKTELGGLVGYSVRFDDLTSDETRIKFLTDGMLLREAIGDPLLRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKQLGKLPLKVIVMSATMDVDLFSEYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVTVFQIHQEAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMMVIPLYASLPYSQQHRIFRAAPKDGRKVILSTNIAETSITIPGIKYVVDTGMVKAKKYRPETGLEVLAVQWVSKAQAWQRTGRAGREDSGICYRLYTENDFEKLNQMTIPEIQRCNLSSVMLQLLALRIPSVLTFDFMSKPSPEAIQAAIEQLVLMGAVEQKDNQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRRKFISSEGDHLTLLSIYRAFRNVNGNKGWCRENFINSRNMMLVSDVRAQLRDICVKLSMPIESSHLDTGNIRRCLAHSLFMNAAELQPDGSYRTVDSHQAVAIHPSSVLFHCKPACVVYNGLVHTNKCYMRDLCVVDADWLYDAAPDYFRRKLQVAKN
SIO_010081: LOC101868288
subclass of: SO_0000673
so part of: LOC101868288
location: join(46221..46785,46945..47105,47802..48029,48670..48840,49566..49751,50437..50548,50931..51090,51505..51593,52146..52273,52834..53037,53742..53828,54851..55159)
location: region:46221-55159:1
so has part: feature:46221-46785:1:exon
so has part: feature:46945-47105:1:exon
so has part: feature:47802-48029:1:exon
so has part: feature:48670-48840:1:exon
so has part: feature:49566-49751:1:exon
so has part: feature:50437-50548:1:exon
so has part: feature:50931-51090:1:exon
so has part: feature:51505-51593:1:exon
so has part: feature:52146-52273:1:exon
so has part: feature:52834-53037:1:exon
so has part: feature:53742-53828:1:exon
so has part: feature:54851-55159:1:exon

XP_005141429.3
type: Protein
SIO_000068: ncbiprotein

position:46221:1
position: 46221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55159:1
position: 55159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46221-46785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46945-47105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47802-48029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48670-48840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49566-49751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50437-50548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50931-51090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51505-51593:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:52146-52273:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52834-53037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53742-53828:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:54851-55159:1:exon

LOC101868288
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DHX33 isoform X2
translation: MADQSLDHLCGSSLDSSACPPLCRVGTSNEHSIPGAAWQVPSTASCQQLVNGNAVGGKPASLRHSLQILGGLGSAGRVSPRQPLPAPCPAMAPWALHCTSQQAPLRQPVTPACARSQRKGAVPGPAGAMRLPGEGPPAKRPKAVLPAQPAVQPRGPPPVEQQRRSLPIFPVRGRLLGHVRGLDSAVVIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRRVAAIALATRVSDEKKTELGGLVGYSVRFDDLTSDETRIKFLTDGMLLREAIGDPLLRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKQLGKLPLKVIVMSATMDVDLFSEYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVTVFQIHQEAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMMVIPLYASLPYSQQHRIFRAAPKDGRKVILSTNIAETSITIPGIKYVVDTGMVKAKKYRPETGLEVLAVQWVSKAQAWQRTGRAGREDSGICYRLYTENDFEKLNQMTIPEIQRCNLSSVMLQLLALRIPSVLTFDFMSKPSPEAIQAAIEQLVLMGAVEQKDNQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRRKFISSEGDHLTLLSIYRAFRNVNGNKGWCRENFINSRNMMLVSDVRAQLRDICVKGLCRHLCVCLCCTALNAHRVLPLGHWEHPPLPGPQPLHECGGAAAGWLLPHRGFPPGSGHPPFLCALPLQASLRGVQRAGPHQQVLHAGPVRGGRGLAL
SIO_010081: LOC101868288
subclass of: SO_0000673
so part of: LOC101868288
location: join(46221..46785,46945..47105,47802..48029,48670..48840,49566..49751,50437..50548,50931..51090,51505..51593,52146..52273,52834..53037,53742..53828,54811..55110)
location: region:46221-55110:1
so has part: feature:46221-46785:1:exon
so has part: feature:46945-47105:1:exon
so has part: feature:47802-48029:1:exon
so has part: feature:48670-48840:1:exon
so has part: feature:49566-49751:1:exon
so has part: feature:50437-50548:1:exon
so has part: feature:50931-51090:1:exon
so has part: feature:51505-51593:1:exon
so has part: feature:52146-52273:1:exon
so has part: feature:52834-53037:1:exon
so has part: feature:53742-53828:1:exon
so has part: feature:54811-55110:1:exon

XP_030910989.2
type: Protein
SIO_000068: ncbiprotein

position:55110:1
position: 55110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46221-46785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46945-47105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47802-48029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48670-48840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49566-49751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50437-50548:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50931-51090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:51505-51593:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:52146-52273:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52834-53037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53742-53828:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:54811-55110:1:exon

LOC101870468
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101870468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 56770..61977
location: region:56770-61977:1
so has part: feature:56770-61977:1:exon
subclass of: SO_0000010

101870468
type: Gene
SIO_000068: ncbigene

position:56770:1
position: 56770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61977:1
position: 61977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56770-61977:1:exon

LOC101870468
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101870468
product: complement C1q binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005141385.3
SIO_010081: LOC101870468
subclass of: SO_0000673
so part of: LOC101870468
location: join(56770..57067,57167..57317,58181..58268,59229..59324,60134..60256,61543..61977)
location: region:56770-61977:1
so has part: feature:56770-57067:1:exon
so has part: feature:57167-57317:1:exon
so has part: feature:58181-58268:1:exon
so has part: feature:59229-59324:1:exon
so has part: feature:60134-60256:1:exon
so has part: feature:61543-61977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56770-57067:1:exon

position:57067:1
position: 57067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57167-57317:1:exon

position:57167:1
position: 57167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57317:1
position: 57317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58181-58268:1:exon

position:58181:1
position: 58181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58268:1
position: 58268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59229-59324:1:exon

position:59229:1
position: 59229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59324:1
position: 59324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:60134-60256:1:exon

position:60134:1
position: 60134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60256:1
position: 60256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:61543-61977:1:exon

position:61543:1
position: 61543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101870468
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101870468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement component 1 Q subcomponent-binding protein, mitochondrial
translation: MLLSKVLRAALRPALRPPPRRLLPFSSSSISSISSASPRSLLPLPCFAPPLARSLWHLGPGGGGGRTALLRPRRGSAGGVCCGCGGLHTEGDKAFAQFLSDEIKEEKKIQKHKALPKVSGGWELEVLGTEAKLLRKVPGEKITVTFNINNSIPPSADDEPQEGQKADEQEPDLTSTPNFVVEVIKDDTKQTLVLDCHYPEDEIGSEGEEESDIFTIREVSFQPTGESDWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNTFADELIELSTALEHQEYIKFLEDLKSFVKCQ
SIO_010081: LOC101870468
subclass of: SO_0000673
so part of: LOC101870468
location: join(56797..57067,57167..57317,58181..58268,59229..59324,60134..60256,61543..61692)
location: region:56797-61692:1
so has part: feature:56797-57067:1:exon
so has part: feature:57167-57317:1:exon
so has part: feature:58181-58268:1:exon
so has part: feature:59229-59324:1:exon
so has part: feature:60134-60256:1:exon
so has part: feature:61543-61692:1:exon

XP_005141442.3
type: Protein
SIO_000068: ncbiprotein

position:56797:1
position: 56797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61692:1
position: 61692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56797-57067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57167-57317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58181-58268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59229-59324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60134-60256:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61543-61692:1:exon

LOC101870302
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101870302
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62500..65266)
location: region:62500-65266:-1
so has part: feature:62500-65266:-1:exon
subclass of: SO_0000010

101870302
type: Gene
SIO_000068: ncbigene

position:62500:-1
position: 62500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65266:-1
position: 65266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62500-65266:-1:exon

LOC101870302
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101870302
product: RPA interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005141384.3
SIO_010081: LOC101870302
subclass of: SO_0000673
so part of: LOC101870302
location: complement(join(62500..62719,63240..63374,63478..63541,63748..63862,64342..64405,64865..65020,65110..65266))
location: region:62500-65266:-1
so has part: feature:65110-65266:-1:exon
so has part: feature:64865-65020:-1:exon
so has part: feature:64342-64405:-1:exon
so has part: feature:63748-63862:-1:exon
so has part: feature:63478-63541:-1:exon
so has part: feature:63240-63374:-1:exon
so has part: feature:62500-62719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65110-65266:-1:exon

position:65110:-1
position: 65110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64865-65020:-1:exon

position:64865:-1
position: 64865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65020:-1
position: 65020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:64342-64405:-1:exon

position:64342:-1
position: 64342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64405:-1
position: 64405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:63748-63862:-1:exon

position:63748:-1
position: 63748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63862:-1
position: 63862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:63478-63541:-1:exon

position:63478:-1
position: 63478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63541:-1
position: 63541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:63240-63374:-1:exon

position:63240:-1
position: 63240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63374:-1
position: 63374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62500-62719:-1:exon

position:62719:-1
position: 62719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101870302
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101870302
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RPA-interacting protein
translation: MEAPPWPRQARYKGRAAPPWKEAYRLRCTERLRSSRAKLLERYRQAGGSPSGPALVREVMEQEWRTLQALSGTEPLPQMLEDPDELAVLEEIQEELILQEQLVMREYEQSLQFDEECLNAMLGGLDASDKIICPVCRKNNLTVRNRVVFCQCGLYISTQDMTEGKLRSLLENTVTEHSHRCFQNPEFTVTSGMEEEASLLMSCAVCDSWTIIL
SIO_010081: LOC101870302
subclass of: SO_0000673
so part of: LOC101870302
location: complement(join(62690..62719,63240..63374,63478..63541,63748..63862,64342..64405,64865..65020,65110..65187))
location: region:62690-65187:-1
so has part: feature:65110-65187:-1:exon
so has part: feature:64865-65020:-1:exon
so has part: feature:64342-64405:-1:exon
so has part: feature:63748-63862:-1:exon
so has part: feature:63478-63541:-1:exon
so has part: feature:63240-63374:-1:exon
so has part: feature:62690-62719:-1:exon

XP_005141441.1
type: Protein
SIO_000068: ncbiprotein

position:62690:-1
position: 62690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65187:-1
position: 65187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65110-65187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64865-65020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64342-64405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63748-63862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63478-63541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63240-63374:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62690-62719:-1:exon

LOC101868121
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 65247..77317
location: region:65247-77317:1
so has part: feature:65247-77317:1:exon
subclass of: SO_0000010

101868121
type: Gene
SIO_000068: ncbigene

position:65247:1
position: 65247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77317:1
position: 77317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65247-77317:1:exon

LOC101868121
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 13146
gene: LOC101868121
product: nucleoporin 88, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004081516.2
SIO_010081: LOC101868121
so part of: LOC101868121
location: join(65247..65514,66304..66473,66930..67055,67250..67336,67897..68073,69089..69272,69695..69845,70533..70631,70780..70870,71066..71167,72189..72347,72542..72667,72969..73034,73197..73277,73597..73723,74082..74200,74576..74695,75512..77317)
location: region:65247-77317:1
so has part: feature:65247-65514:1:exon
so has part: feature:66304-66473:1:exon
so has part: feature:66930-67055:1:exon
so has part: feature:67250-67336:1:exon
so has part: feature:67897-68073:1:exon
so has part: feature:69089-69272:1:exon
so has part: feature:69695-69845:1:exon
so has part: feature:70533-70631:1:exon
so has part: feature:70780-70870:1:exon
so has part: feature:71066-71167:1:exon
so has part: feature:72189-72347:1:exon
so has part: feature:72542-72667:1:exon
so has part: feature:72969-73034:1:exon
so has part: feature:73197-73277:1:exon
so has part: feature:73597-73723:1:exon
so has part: feature:74082-74200:1:exon
so has part: feature:74576-74695:1:exon
so has part: feature:75512-77317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65247-65514:1:exon

position:65514:1
position: 65514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66304-66473:1:exon

position:66304:1
position: 66304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66473:1
position: 66473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66930-67055:1:exon

position:66930:1
position: 66930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67055:1
position: 67055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67250-67336:1:exon

position:67250:1
position: 67250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67336:1
position: 67336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:67897-68073:1:exon

position:67897:1
position: 67897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68073:1
position: 68073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:69089-69272:1:exon

position:69089:1
position: 69089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69272:1
position: 69272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:69695-69845:1:exon

position:69695:1
position: 69695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69845:1
position: 69845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:70533-70631:1:exon

position:70533:1
position: 70533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70631:1
position: 70631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:70780-70870:1:exon

position:70780:1
position: 70780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70870:1
position: 70870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:71066-71167:1:exon

position:71066:1
position: 71066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71167:1
position: 71167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:72189-72347:1:exon

position:72189:1
position: 72189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72347:1
position: 72347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:72542-72667:1:exon

position:72542:1
position: 72542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72667:1
position: 72667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:72969-73034:1:exon

position:72969:1
position: 72969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73034:1
position: 73034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:73197-73277:1:exon

position:73197:1
position: 73197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73277:1
position: 73277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:73597-73723:1:exon

position:73597:1
position: 73597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73723:1
position: 73723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:74082-74200:1:exon

position:74082:1
position: 74082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74200:1
position: 74200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:74576-74695:1:exon

position:74576:1
position: 74576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74695:1
position: 74695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:75512-77317:1:exon

position:75512:1
position: 75512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868121
product: nucleoporin 88, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031055118.2
SIO_010081: LOC101868121
subclass of: SO_0000673
so part of: LOC101868121
location: join(65247..65514,66304..66473,66930..67055,67250..67336,67897..68073,69089..69272,69695..69845,70533..70631,70780..70870,71066..71167,72189..72347,72542..72667,72969..73034,73197..73277,73597..73723,74082..74200,74576..74802)
location: region:65247-74802:1
so has part: feature:65247-65514:1:exon
so has part: feature:66304-66473:1:exon
so has part: feature:66930-67055:1:exon
so has part: feature:67250-67336:1:exon
so has part: feature:67897-68073:1:exon
so has part: feature:69089-69272:1:exon
so has part: feature:69695-69845:1:exon
so has part: feature:70533-70631:1:exon
so has part: feature:70780-70870:1:exon
so has part: feature:71066-71167:1:exon
so has part: feature:72189-72347:1:exon
so has part: feature:72542-72667:1:exon
so has part: feature:72969-73034:1:exon
so has part: feature:73197-73277:1:exon
so has part: feature:73597-73723:1:exon
so has part: feature:74082-74200:1:exon
so has part: feature:74576-74802:1:exon

position:74802:1
position: 74802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65247-65514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66304-66473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66930-67055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67250-67336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67897-68073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69089-69272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69695-69845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:70533-70631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70780-70870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:71066-71167:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:72189-72347:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:72542-72667:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:72969-73034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73197-73277:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73597-73723:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74082-74200:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:74576-74802:1:exon

LOC101868121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup88
translation: MAAESGPGEQWRSALPQHEVLSRLRQREAAAPAAPRPPIIRNLLFCLDGDLFLWDSEHSALHTIGLRRLGGPDPAGLSRYQTLMCINPPLFEVYQTLLSPTQHHVALIGTKGLMVLELPKRWGKNSEFEGGKSTVNCSTVPIAERFFTSSTSLTLKHAAWYPCETLEPHIVLLTSDNTIRFYSLKVPHTPIKVIALSDTEEETFTIKKGRAYTASLGETAVAFDFGPLVPVPENTLGQRGSDEVLAYPLYILYENGETFLTYISLLQSTGNLGKLLGPLPMHPAAEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLDGEEDDDQSEKSWDPRSDIIPSLYVFECVELELALKLASGDEEEPLESDFSCPIKLHQDPKCPSRYHCTHEAGVHSVGLTWINKLHKFLSSDEEDKDSLLELGAEQKCFVEHILCTKPLPCRQPAPIRGFWIVSDILGPTMICITNTYECITRPLLSTVHPASPPLLCTREDKEVAVSPLRILATSQHSFERHIRSILQRSSANPLVLKSADKDAAPPPEECLQLLSRATQVFREEYILKQDLAKEEIQQRVKLLWGQKKKQLEELNYCREERKSLREMAERLADKYEEAKEKQEDIMSRMKKVLRSFHSQLPVLSDSEKDMRKELQTIHDQLQHLSNAIRQVKMKKEYQQKKMERGSSPRKPSISLSAYQSKCIQTVLKEEGEHIREMVKQINDIRSHVNF
SIO_010081: LOC101868121
subclass of: SO_0000673
so part of: LOC101868121
location: join(65272..65514,66304..66473,66930..67055,67250..67336,67897..68073,69089..69272,69695..69845,70533..70631,70780..70870,71066..71167,72189..72347,72542..72667,72969..73034,73197..73277,73597..73723,74082..74200,74576..74639)
location: region:65272-74639:1
so has part: feature:65272-65514:1:exon
so has part: feature:66304-66473:1:exon
so has part: feature:66930-67055:1:exon
so has part: feature:67250-67336:1:exon
so has part: feature:67897-68073:1:exon
so has part: feature:69089-69272:1:exon
so has part: feature:69695-69845:1:exon
so has part: feature:70533-70631:1:exon
so has part: feature:70780-70870:1:exon
so has part: feature:71066-71167:1:exon
so has part: feature:72189-72347:1:exon
so has part: feature:72542-72667:1:exon
so has part: feature:72969-73034:1:exon
so has part: feature:73197-73277:1:exon
so has part: feature:73597-73723:1:exon
so has part: feature:74082-74200:1:exon
so has part: feature:74576-74639:1:exon

XP_030910978.2
type: Protein
SIO_000068: ncbiprotein

position:65272:1
position: 65272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74639:1
position: 74639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65272-65514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66304-66473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66930-67055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67250-67336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67897-68073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69089-69272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69695-69845:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:70533-70631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70780-70870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:71066-71167:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:72189-72347:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:72542-72667:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:72969-73034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73197-73277:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73597-73723:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:74082-74200:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:74576-74639:1:exon

LOC101867952
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101867952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(78393..122412)
location: region:78393-122412:-1
so has part: feature:78393-122412:-1:exon
subclass of: SO_0000010

101867952
type: Gene
SIO_000068: ncbigene

position:78393:-1
position: 78393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122412:-1
position: 122412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78393-122412:-1:exon

LOC101867952
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101867952
product: rabaptin, RAB GTPase binding effector protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034068811.1
SIO_010081: LOC101867952
subclass of: SO_0000673
so part of: LOC101867952
location: complement(join(78393..79039,81124..81240,82349..82429,83051..83106,83378..83567,84240..84380,85655..85753,87009..87125,87841..87945,89163..89630,92320..92445,93328..93506,94237..94372,96807..96926,99831..99991,101239..101442,103575..103703,122212..122412))
location: region:78393-122412:-1
so has part: feature:122212-122412:-1:exon
so has part: feature:103575-103703:-1:exon
so has part: feature:101239-101442:-1:exon
so has part: feature:99831-99991:-1:exon
so has part: feature:96807-96926:-1:exon
so has part: feature:94237-94372:-1:exon
so has part: feature:93328-93506:-1:exon
so has part: feature:92320-92445:-1:exon
so has part: feature:89163-89630:-1:exon
so has part: feature:87841-87945:-1:exon
so has part: feature:87009-87125:-1:exon
so has part: feature:85655-85753:-1:exon
so has part: feature:84240-84380:-1:exon
so has part: feature:83378-83567:-1:exon
so has part: feature:83051-83106:-1:exon
so has part: feature:82349-82429:-1:exon
so has part: feature:81124-81240:-1:exon
so has part: feature:78393-79039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122212-122412:-1:exon

position:122212:-1
position: 122212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103575-103703:-1:exon

position:103575:-1
position: 103575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103703:-1
position: 103703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101239-101442:-1:exon

position:101239:-1
position: 101239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101442:-1
position: 101442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99831-99991:-1:exon

position:99831:-1
position: 99831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99991:-1
position: 99991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96807-96926:-1:exon

position:96807:-1
position: 96807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96926:-1
position: 96926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:94237-94372:-1:exon

position:94237:-1
position: 94237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94372:-1
position: 94372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93328-93506:-1:exon

position:93328:-1
position: 93328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93506:-1
position: 93506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:92320-92445:-1:exon

position:92320:-1
position: 92320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92445:-1
position: 92445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:89163-89630:-1:exon

position:89163:-1
position: 89163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89630:-1
position: 89630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:87841-87945:-1:exon

position:87841:-1
position: 87841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87945:-1
position: 87945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:87009-87125:-1:exon

position:87009:-1
position: 87009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87125:-1
position: 87125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:85655-85753:-1:exon

position:85655:-1
position: 85655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85753:-1
position: 85753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:84240-84380:-1:exon

position:84240:-1
position: 84240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84380:-1
position: 84380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:83378-83567:-1:exon

position:83378:-1
position: 83378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83567:-1
position: 83567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:83051-83106:-1:exon

position:83051:-1
position: 83051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83106:-1
position: 83106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:82349-82429:-1:exon

position:82349:-1
position: 82349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82429:-1
position: 82429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:81124-81240:-1:exon

position:81124:-1
position: 81124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81240:-1
position: 81240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:78393-79039:-1:exon

position:79039:-1
position: 79039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101867952
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101867952
product: rabaptin, RAB GTPase binding effector protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 23 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068810.1
SIO_010081: LOC101867952
subclass of: SO_0000673
so part of: LOC101867952
location: complement(join(78393..79039,81124..81240,82349..82447,83051..83106,83378..83567,84240..84380,85655..85753,87009..87125,87841..87945,89163..89630,92320..92445,93328..93506,94237..94372,96807..96926,99831..99991,101239..101442,103575..103703,122212..122412))
location: region:78393-122412:-1
so has part: feature:122212-122412:-1:exon
so has part: feature:103575-103703:-1:exon
so has part: feature:101239-101442:-1:exon
so has part: feature:99831-99991:-1:exon
so has part: feature:96807-96926:-1:exon
so has part: feature:94237-94372:-1:exon
so has part: feature:93328-93506:-1:exon
so has part: feature:92320-92445:-1:exon
so has part: feature:89163-89630:-1:exon
so has part: feature:87841-87945:-1:exon
so has part: feature:87009-87125:-1:exon
so has part: feature:85655-85753:-1:exon
so has part: feature:84240-84380:-1:exon
so has part: feature:83378-83567:-1:exon
so has part: feature:83051-83106:-1:exon
so has part: feature:82349-82447:-1:exon
so has part: feature:81124-81240:-1:exon
so has part: feature:78393-79039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122212-122412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103575-103703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101239-101442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99831-99991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96807-96926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94237-94372:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93328-93506:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92320-92445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89163-89630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87841-87945:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:87009-87125:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85655-85753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84240-84380:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83378-83567:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83051-83106:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82349-82447:-1:exon

position:82447:-1
position: 82447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:81124-81240:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78393-79039:-1:exon

LOC101867952
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101867952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-binding effector protein 1 isoform X2
translation: MAQPGPSPPTDVALLQRVAELEKVNAEFLRTKQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGQLRTQLMEAHAEMENIKAIATVSENTKQEAIDEVKRQWQEEVASLQAIMKETVRDYELQYHHRMEQERAQWNQYRENMEREIAELRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKEKLTGAEEKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDDQQRLSKRKEQKQKDSDDETKASCSLAQEETLTQLSNEEVQVNSTHGSVHSLDADLLLSSGESFNKSDNDMFKDGLRRAQSTDSLGTSGSLQSKALGYNNKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQEKAIKAMTPEQEETASLLSSVTQGVESAYVSPSGYRLVSETEWNLLQKEVQNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDYMKQSAEDSSNQISLLMAKCQKSENLLNELQQAFSQAKRSVQEQMAVLTQSREQVSEELVRLQKDNESLQGKHSLHVSLQQAEDFILPEAAEELRELILKYREDIISVRTAADHLEEKLKAEILFLKEQIQAEQYLKENIEETLQLEIENCKEEIASISSLKAELERIKVEKEQENMQQLESLQEAKTTLEEQLKKETAAKANLEQLVFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLTDINQLPET
SIO_010081: LOC101867952
subclass of: SO_0000673
so part of: LOC101867952
location: complement(join(78938..79039,81124..81240,82349..82429,83051..83106,83378..83567,84240..84380,85655..85753,87009..87125,87841..87945,89163..89630,92320..92445,93328..93506,94237..94372,96807..96926,99831..99991,101239..101442,103575..103703,122212..122245))
location: region:78938-122245:-1
so has part: feature:122212-122245:-1:exon
so has part: feature:103575-103703:-1:exon
so has part: feature:101239-101442:-1:exon
so has part: feature:99831-99991:-1:exon
so has part: feature:96807-96926:-1:exon
so has part: feature:94237-94372:-1:exon
so has part: feature:93328-93506:-1:exon
so has part: feature:92320-92445:-1:exon
so has part: feature:89163-89630:-1:exon
so has part: feature:87841-87945:-1:exon
so has part: feature:87009-87125:-1:exon
so has part: feature:85655-85753:-1:exon
so has part: feature:84240-84380:-1:exon
so has part: feature:83378-83567:-1:exon
so has part: feature:83051-83106:-1:exon
so has part: feature:82349-82429:-1:exon
so has part: feature:81124-81240:-1:exon
so has part: feature:78938-79039:-1:exon

XP_033924702.1
type: Protein
SIO_000068: ncbiprotein

position:78938:-1
position: 78938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122245:-1
position: 122245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122212-122245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103575-103703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101239-101442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99831-99991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96807-96926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94237-94372:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93328-93506:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92320-92445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89163-89630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87841-87945:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:87009-87125:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85655-85753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84240-84380:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83378-83567:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83051-83106:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82349-82429:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:81124-81240:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78938-79039:-1:exon

LOC101867952
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101867952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-binding effector protein 1 isoform X1
translation: MAQPGPSPPTDVALLQRVAELEKVNAEFLRTKQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGQLRTQLMEAHAEMENIKAIATVSENTKQEAIDEVKRQWQEEVASLQAIMKETVRDYELQYHHRMEQERAQWNQYRENMEREIAELRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKEKLTGAEEKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDDQQRLSKRKEQKQKDSDDETKASCSLAQEETLTQLSNEEVQVNSTHGSVHSLDADLLLSSGESFNKSDNDMFKDGLRRAQSTDSLGTSGSLQSKALGYNNKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQEKAIKAMTPEQEETASLLSSVTQGVESAYVSPSGYRLVSETEWNLLQKEVQNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDYMKQSAEDSSNQISLLMAKCQKSENLLNELQQAFSQAKRSVQEQMAVLTQSREQVSEELVRLQKDNESLQGKHSLHVSLQQAEDFILPEAAEELRELILKYREDIISVRTAADHLEEKLKAEILFLKEQIQAEQYLKENIEETLQLEIENCKEEIASISSLKAELERIKVEKEQLESSSQENMQQLESLQEAKTTLEEQLKKETAAKANLEQLVFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLTDINQLPET
SIO_010081: LOC101867952
subclass of: SO_0000673
so part of: LOC101867952
location: complement(join(78938..79039,81124..81240,82349..82447,83051..83106,83378..83567,84240..84380,85655..85753,87009..87125,87841..87945,89163..89630,92320..92445,93328..93506,94237..94372,96807..96926,99831..99991,101239..101442,103575..103703,122212..122245))
location: region:78938-122245:-1
so has part: feature:122212-122245:-1:exon
so has part: feature:103575-103703:-1:exon
so has part: feature:101239-101442:-1:exon
so has part: feature:99831-99991:-1:exon
so has part: feature:96807-96926:-1:exon
so has part: feature:94237-94372:-1:exon
so has part: feature:93328-93506:-1:exon
so has part: feature:92320-92445:-1:exon
so has part: feature:89163-89630:-1:exon
so has part: feature:87841-87945:-1:exon
so has part: feature:87009-87125:-1:exon
so has part: feature:85655-85753:-1:exon
so has part: feature:84240-84380:-1:exon
so has part: feature:83378-83567:-1:exon
so has part: feature:83051-83106:-1:exon
so has part: feature:82349-82447:-1:exon
so has part: feature:81124-81240:-1:exon
so has part: feature:78938-79039:-1:exon

XP_033924701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122212-122245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103575-103703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101239-101442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99831-99991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96807-96926:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94237-94372:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93328-93506:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92320-92445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89163-89630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:87841-87945:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:87009-87125:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85655-85753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84240-84380:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:83378-83567:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83051-83106:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:82349-82447:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:81124-81240:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78938-79039:-1:exon

LOC101881842
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 122300..330817
location: region:122300-330817:1
so has part: feature:122300-330817:1:exon
subclass of: SO_0000010

101881842
type: Gene
SIO_000068: ncbigene

position:122300:1
position: 122300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330817:1
position: 330817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122300-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068817.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(122300..122435,127571..127726,128254..128359,131252..131303,137340..138855,141802..141909,143696..143912,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:122300-330817:1
so has part: feature:122300-122435:1:exon
so has part: feature:127571-127726:1:exon
so has part: feature:128254-128359:1:exon
so has part: feature:131252-131303:1:exon
so has part: feature:137340-138855:1:exon
so has part: feature:141802-141909:1:exon
so has part: feature:143696-143912:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122300-122435:1:exon

position:122435:1
position: 122435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127571-127726:1:exon

position:127571:1
position: 127571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127726:1
position: 127726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128254-128359:1:exon

position:128254:1
position: 128254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128359:1
position: 128359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:131252-131303:1:exon

position:131252:1
position: 131252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131303:1
position: 131303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:137340-138855:1:exon

position:137340:1
position: 137340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138855:1
position: 138855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141802-141909:1:exon

position:141802:1
position: 141802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141909:1
position: 141909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:143696-143912:1:exon

position:143696:1
position: 143696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143912:1
position: 143912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:184835-184957:1:exon

position:184835:1
position: 184835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184957:1
position: 184957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:194737-194840:1:exon

position:194737:1
position: 194737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194840:1
position: 194840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:274082-274123:1:exon

position:274082:1
position: 274082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274123:1
position: 274123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:288723-288784:1:exon

position:288723:1
position: 288723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288784:1
position: 288784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:300447-300600:1:exon

position:300447:1
position: 300447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300600:1
position: 300600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:303415-303459:1:exon

position:303415:1
position: 303415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303459:1
position: 303459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:306550-306666:1:exon

position:306550:1
position: 306550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306666:1
position: 306666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:307780-307932:1:exon

position:307780:1
position: 307780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307932:1
position: 307932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:310068-310169:1:exon

position:310068:1
position: 310068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310169:1
position: 310169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:313138-313230:1:exon

position:313138:1
position: 313138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313230:1
position: 313230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:314638-314699:1:exon

position:314638:1
position: 314638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314699:1
position: 314699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:317006-317068:1:exon

position:317006:1
position: 317006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317068:1
position: 317068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:320643-320687:1:exon

position:320643:1
position: 320643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320687:1
position: 320687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:322024-322068:1:exon

position:322024:1
position: 322024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322068:1
position: 322068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:322955-323039:1:exon

position:322955:1
position: 322955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323039:1
position: 323039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:326621-330817:1:exon

position:326621:1
position: 326621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068814.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(122333..122435,123249..123382,127571..127726,128251..128359,131252..131303,137340..138855,141802..141909,143696..143912,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:122333-330817:1
so has part: feature:122333-122435:1:exon
so has part: feature:123249-123382:1:exon
so has part: feature:127571-127726:1:exon
so has part: feature:128251-128359:1:exon
so has part: feature:131252-131303:1:exon
so has part: feature:137340-138855:1:exon
so has part: feature:141802-141909:1:exon
so has part: feature:143696-143912:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

position:122333:1
position: 122333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122333-122435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123249-123382:1:exon

position:123249:1
position: 123249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123382:1
position: 123382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:127571-127726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128251-128359:1:exon

position:128251:1
position: 128251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137340-138855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141802-141909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:143696-143912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068818.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(122333..122435,123249..123382,127571..127726,128254..128359,131252..131303,137340..137500,138463..138855,141802..141909,143696..143912,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:122333-330817:1
so has part: feature:122333-122435:1:exon
so has part: feature:123249-123382:1:exon
so has part: feature:127571-127726:1:exon
so has part: feature:128254-128359:1:exon
so has part: feature:131252-131303:1:exon
so has part: feature:137340-137500:1:exon
so has part: feature:138463-138855:1:exon
so has part: feature:141802-141909:1:exon
so has part: feature:143696-143912:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122333-122435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123249-123382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127571-127726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128254-128359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137340-137500:1:exon

position:137500:1
position: 137500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:138463-138855:1:exon

position:138463:1
position: 138463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:141802-141909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:143696-143912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068819.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(122333..122435,123249..123382,127571..127726,128254..128359,131252..131303,137340..137500,138556..138855,141802..141909,143696..143912,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:122333-330817:1
so has part: feature:122333-122435:1:exon
so has part: feature:123249-123382:1:exon
so has part: feature:127571-127726:1:exon
so has part: feature:128254-128359:1:exon
so has part: feature:131252-131303:1:exon
so has part: feature:137340-137500:1:exon
so has part: feature:138556-138855:1:exon
so has part: feature:141802-141909:1:exon
so has part: feature:143696-143912:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122333-122435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123249-123382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127571-127726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128254-128359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137340-137500:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138556-138855:1:exon

position:138556:1
position: 138556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:141802-141909:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:143696-143912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068816.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(122333..122435,123249..123382,127571..127726,131252..131303,137340..138855,141802..141909,143696..143912,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:122333-330817:1
so has part: feature:122333-122435:1:exon
so has part: feature:123249-123382:1:exon
so has part: feature:127571-127726:1:exon
so has part: feature:131252-131303:1:exon
so has part: feature:137340-138855:1:exon
so has part: feature:141802-141909:1:exon
so has part: feature:143696-143912:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122333-122435:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123249-123382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127571-127726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131252-131303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137340-138855:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141802-141909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:143696-143912:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068813.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(122451..122529,123249..123382,127571..127726,128254..128359,131252..131303,137340..138855,141802..141909,143696..143912,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:122451-330817:1
so has part: feature:122451-122529:1:exon
so has part: feature:123249-123382:1:exon
so has part: feature:127571-127726:1:exon
so has part: feature:128254-128359:1:exon
so has part: feature:131252-131303:1:exon
so has part: feature:137340-138855:1:exon
so has part: feature:141802-141909:1:exon
so has part: feature:143696-143912:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

position:122451:1
position: 122451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122451-122529:1:exon

position:122529:1
position: 122529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123249-123382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127571-127726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128254-128359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131252-131303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137340-138855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141802-141909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:143696-143912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:326621-330817:1:exon

LOC101867676
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101867676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(140847..144239)
location: region:140847-144239:-1
so has part: feature:140847-144239:-1:exon
subclass of: SO_0000010

101867676
type: Gene
SIO_000068: ncbigene

position:140847:-1
position: 140847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144239:-1
position: 144239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140847-144239:-1:exon

LOC101867676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101867676
product: intraflagellar transport 22, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005141369.2
SIO_010081: LOC101867676
subclass of: SO_0000673
so part of: LOC101867676
location: complement(join(140847..141901,142836..143038,143809..143888,144117..144239))
location: region:140847-144239:-1
so has part: feature:144117-144239:-1:exon
so has part: feature:143809-143888:-1:exon
so has part: feature:142836-143038:-1:exon
so has part: feature:140847-141901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144117-144239:-1:exon

position:144117:-1
position: 144117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143809-143888:-1:exon

position:143809:-1
position: 143809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143888:-1
position: 143888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142836-143038:-1:exon

position:142836:-1
position: 142836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143038:-1
position: 143038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:140847-141901:-1:exon

position:141901:-1
position: 141901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101867676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101867676
product: intraflagellar transport 22, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005141368.3
SIO_010081: LOC101867676
subclass of: SO_0000673
so part of: LOC101867676
location: complement(join(140847..141901,142836..143038,143610..143699,143809..143888,144117..144239))
location: region:140847-144239:-1
so has part: feature:144117-144239:-1:exon
so has part: feature:143809-143888:-1:exon
so has part: feature:143610-143699:-1:exon
so has part: feature:142836-143038:-1:exon
so has part: feature:140847-141901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144117-144239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143809-143888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143610-143699:-1:exon

position:143610:-1
position: 143610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143699:-1
position: 143699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142836-143038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140847-141901:-1:exon

LOC101867676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101867676
product: intraflagellar transport 22, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031055113.1
SIO_010081: LOC101867676
subclass of: SO_0000673
so part of: LOC101867676
location: complement(join(140847..141901,142836..143038,143809..143888,144050..144150))
location: region:140847-144150:-1
so has part: feature:144050-144150:-1:exon
so has part: feature:143809-143888:-1:exon
so has part: feature:142836-143038:-1:exon
so has part: feature:140847-141901:-1:exon

position:144150:-1
position: 144150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144050-144150:-1:exon

position:144050:-1
position: 144050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143809-143888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142836-143038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140847-141901:-1:exon

LOC101867676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101867676
product: intraflagellar transport 22, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031055112.1
SIO_010081: LOC101867676
subclass of: SO_0000673
so part of: LOC101867676
location: complement(join(140847..141901,142836..143038,143610..143699,143809..143888,144050..144150))
location: region:140847-144150:-1
so has part: feature:144050-144150:-1:exon
so has part: feature:143809-143888:-1:exon
so has part: feature:143610-143699:-1:exon
so has part: feature:142836-143038:-1:exon
so has part: feature:140847-141901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144050-144150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143809-143888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143610-143699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142836-143038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140847-141901:-1:exon

LOC101867676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101867676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 22 homolog isoform X2
translation: MLKAKVLLVGPRESGKSVLTNFISESIEGIGSYSPTQGLRFETCWPALMKDSHGVIIIFNPELPSHLKEIEMWYSCFVQQQSLLDSQCLLVAHHKPGSGGDTEDLSLAYPLNKLKLIHSNLEEDPEDVRMEFMKYFKSIITLINESREREEMSIIS
SIO_010081: LOC101867676
subclass of: SO_0000673
so part of: LOC101867676
location: complement(join(141753..141901,142836..143038,143809..143888,144117..144155))
location: region:141753-144155:-1
so has part: feature:144117-144155:-1:exon
so has part: feature:143809-143888:-1:exon
so has part: feature:142836-143038:-1:exon
so has part: feature:141753-141901:-1:exon

XP_005141426.1
type: Protein
SIO_000068: ncbiprotein

position:141753:-1
position: 141753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144155:-1
position: 144155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144117-144155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143809-143888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142836-143038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141753-141901:-1:exon

LOC101867676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101867676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 22 homolog isoform X1
translation: MLKAKVLLVGPRESGKSVLTNFISESIEGIGSYSPTQGLRILEYEKPNLNTNTKGAGCRFELWDCSGDQKFETCWPALMKDSHGVIIIFNPELPSHLKEIEMWYSCFVQQQSLLDSQCLLVAHHKPGSGGDTEDLSLAYPLNKLKLIHSNLEEDPEDVRMEFMKYFKSIITLINESREREEMSIIS
SIO_010081: LOC101867676
subclass of: SO_0000673
so part of: LOC101867676
location: complement(join(141753..141901,142836..143038,143610..143699,143809..143888,144117..144155))
location: region:141753-144155:-1
so has part: feature:144117-144155:-1:exon
so has part: feature:143809-143888:-1:exon
so has part: feature:143610-143699:-1:exon
so has part: feature:142836-143038:-1:exon
so has part: feature:141753-141901:-1:exon

XP_005141425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144117-144155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143809-143888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143610-143699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142836-143038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141753-141901:-1:exon

LOC101867676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101867676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 22 homolog isoform X3
translation: MKDSHGVIIIFNPELPSHLKEIEMWYSCFVQQQSLLDSQCLLVAHHKPGSGGDTEDLSLAYPLNKLKLIHSNLEEDPEDVRMEFMKYFKSIITLINESREREEMSIIS
SIO_010081: LOC101867676
subclass of: SO_0000673
so part of: LOC101867676
location: complement(join(141753..141901,142836..143013))
location: region:141753-143013:-1
so has part: feature:142836-143013:-1:exon
so has part: feature:141753-141901:-1:exon

XP_030910972.1
type: Protein
SIO_000068: ncbiprotein

position:143013:-1
position: 143013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142836-143013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141753-141901:-1:exon

LOC101867676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101867676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 22 homolog isoform X3
translation: MKDSHGVIIIFNPELPSHLKEIEMWYSCFVQQQSLLDSQCLLVAHHKPGSGGDTEDLSLAYPLNKLKLIHSNLEEDPEDVRMEFMKYFKSIITLINESREREEMSIIS
SIO_010081: LOC101867676
subclass of: SO_0000673
so part of: LOC101867676
location: complement(join(141753..141901,142836..143013))
location: region:141753-143013:-1
so has part: feature:142836-143013:-1:exon
so has part: feature:141753-141901:-1:exon

XP_030910973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142836-143013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141753-141901:-1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031055095.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326789,327273..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326789:1:exon
so has part: feature:327273-330817:1:exon

position:160058:1
position: 160058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

position:160481:1
position: 160481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:326621-326789:1:exon

position:326789:1
position: 326789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:327273-330817:1:exon

position:327273:1
position: 327273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031055097.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326645..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326645-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:326645-330817:1:exon

position:326645:1
position: 326645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031055100.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,322024..322068,322955..323039,326621..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031055102.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,322955..323039,326621..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031055105.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,322955..323039,326645..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326645-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326645-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031055103.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031055098.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194737..194840,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_013130746.2
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194737..194840,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031055106.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194737..194840,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,313138..313230,314638..314699,317006..317068,322024..322068,322955..323039,326621..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031055096.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194743..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194743-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194743-194840:1:exon

position:194743:1
position: 194743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031055104.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194743..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194743-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194743-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031055101.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194743..194840,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194743-194840:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194743-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881842
product: collagen type XXVI alpha 1 chain, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031055111.1
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160058..160481,184835..184957,194743..194840,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..330817)
location: region:160058-330817:1
so has part: feature:160058-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194743-194840:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-330817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160058-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194743-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-330817:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X1
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVSYRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326789,327273..327276)
location: region:160330-327276:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326789:1:exon
so has part: feature:327273-327276:1:exon

XP_030910955.1
type: Protein
SIO_000068: ncbiprotein

position:160330:1
position: 160330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327276:1
position: 327276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:326621-326789:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:327273-327276:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X3
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVSYRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326645..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326645-326793:1:exon

XP_030910957.1
type: Protein
SIO_000068: ncbiprotein

position:326793:1
position: 326793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:326645-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X5
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVSYRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,322024..322068,322955..323039,326621..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_030910960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X7
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVSYRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,322955..323039,326621..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_030910962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X10
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVSYRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGEGVQQLREALKILAERVLILEHMIGIHGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,322955..323039,326645..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326645-326793:1:exon

XP_030910965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326645-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X8
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVSYRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKENGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194737..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_030910963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X4
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVSYRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEECMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194737..194840,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_030910958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X11
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVSYRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEECMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKENGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194737..194840,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_012986200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X12
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVSYRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEECMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKENGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194737..194840,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,313138..313230,314638..314699,317006..317068,322024..322068,322955..323039,326621..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194737-194840:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_030910966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194737-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X2
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194743..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194743-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_030910956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194743-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X9
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKENGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194743..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194743-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_030910964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194743-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X6
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEECMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194743..194840,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194743-194840:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_030910961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194743-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X14
translation: MQLALFLSWCCCLHGCALGTGFLYQFPASTLQHNYPEQSSGSPGSGFASRRHWCHYTVTRTVSCQVQNGSETVIQRVYQSCRWPGPCANLVRTLIRPTYKMSYRTVTTLEWRCCPGFTGSNCEEECMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKENGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(160330..160481,184835..184957,194743..194840,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:160330-326793:1
so has part: feature:160330-160481:1:exon
so has part: feature:184835-184957:1:exon
so has part: feature:194743-194840:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_030910971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160330-160481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184835-184957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194743-194840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X13
translation: MSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(194768..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:194768-326793:1
so has part: feature:194768-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_033924704.1
type: Protein
SIO_000068: ncbiprotein

position:194768:1
position: 194768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194768-194840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X13
translation: MSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(194768..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:194768-326793:1
so has part: feature:194768-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_033924705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194768-194840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X13
translation: MSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(194768..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:194768-326793:1
so has part: feature:194768-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_033924707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194768-194840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X13
translation: MSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(194768..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:194768-326793:1
so has part: feature:194768-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_033924708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194768-194840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X13
translation: MSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(194768..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:194768-326793:1
so has part: feature:194768-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_033924709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194768-194840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-326793:1:exon

LOC101881842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(XXVI) chain isoform X13
translation: MSYRTVTTLEWRCCPGFTGSNCEEGSSGRQHGSFPNQDQCMNCTRLADMTERLNTLEAKILLLEEAERSPPLENNLPITGTTATWYDDLLPDAFPLLNPGTVLRKTVGPVEPKGHRGAQEQLIPQGLPGQVGPPGPVGPTGLPGPPGPKGEKGQPGERGPAGPPGLLGPQGPRGLPGETGIPGPPGPPGPPATPSLPLTFQQGVLYSLQPTAEKEIRNIKRRPEAKLPRAVAEAAATKITCCHFKMHGSDGEPQLASTVIDTIMAGLPGPRGAPGPVGPPGPPGASGPKGPPGPVGVPGSQGLPGSPGQPGPKGSKGDRGERGQAGLAGERGIKGFPGEPGKKGEEGDKGADGEGVQQLREALKILAERVLILEHMIGIHDSLSSIEPGSGQDVILGSPLRTSIKIKRGGPQQPQAYQILSSLLDGSEAKRRSNRMK
SIO_010081: LOC101881842
subclass of: SO_0000673
so part of: LOC101881842
location: join(194768..194840,274082..274123,288723..288784,300447..300600,303415..303459,306550..306666,307780..307932,310068..310169,313138..313230,314638..314699,317006..317068,320643..320687,322024..322068,322955..323039,326621..326793)
location: region:194768-326793:1
so has part: feature:194768-194840:1:exon
so has part: feature:274082-274123:1:exon
so has part: feature:288723-288784:1:exon
so has part: feature:300447-300600:1:exon
so has part: feature:303415-303459:1:exon
so has part: feature:306550-306666:1:exon
so has part: feature:307780-307932:1:exon
so has part: feature:310068-310169:1:exon
so has part: feature:313138-313230:1:exon
so has part: feature:314638-314699:1:exon
so has part: feature:317006-317068:1:exon
so has part: feature:320643-320687:1:exon
so has part: feature:322024-322068:1:exon
so has part: feature:322955-323039:1:exon
so has part: feature:326621-326793:1:exon

XP_033924710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194768-194840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274082-274123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288723-288784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300447-300600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303415-303459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306550-306666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307780-307932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310068-310169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313138-313230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314638-314699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317006-317068:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320643-320687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322024-322068:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322955-323039:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:326621-326793:1:exon

LOC101870134
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101870134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 332792..347142
location: region:332792-347142:1
so has part: feature:332792-347142:1:exon

101870134
type: Gene
SIO_000068: ncbigene

position:332792:1
position: 332792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347142:1
position: 347142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332792-347142:1:exon

LOC101870134
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC101870134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101870134
subclass of: SO_0000673
so part of: LOC101870134
location: 332792..332828
location: region:332792-332828:1
so has part: feature:332792-332828:1:exon

position:332828:1
position: 332828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332792-332828:1:exon

LOC101870134
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC101870134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101870134
subclass of: SO_0000673
so part of: LOC101870134
location: 333713..333949
location: region:333713-333949:1
so has part: feature:333713-333949:1:exon

position:333713:1
position: 333713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333949:1
position: 333949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333713-333949:1:exon

LOC101870134
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC101870134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101870134
subclass of: SO_0000673
so part of: LOC101870134
location: 337202..337352
location: region:337202-337352:1
so has part: feature:337202-337352:1:exon

position:337202:1
position: 337202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337352:1
position: 337352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337202-337352:1:exon

LOC101870134
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC101870134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101870134
subclass of: SO_0000673
so part of: LOC101870134
location: 339471..339559
location: region:339471-339559:1
so has part: feature:339471-339559:1:exon

position:339471:1
position: 339471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339559:1
position: 339559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339471-339559:1:exon

LOC101870134
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC101870134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101870134
subclass of: SO_0000673
so part of: LOC101870134
location: 343469..343568
location: region:343469-343568:1
so has part: feature:343469-343568:1:exon

position:343469:1
position: 343469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343568:1
position: 343568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343469-343568:1:exon

LOC101870134
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC101870134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101870134
subclass of: SO_0000673
so part of: LOC101870134
location: 344446..344608
location: region:344446-344608:1
so has part: feature:344446-344608:1:exon

position:344446:1
position: 344446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344608:1
position: 344608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344446-344608:1:exon

LOC101870134
type: Exon
subclass of: SO_0000147
RO_0002162: 13146
gene: LOC101870134
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101870134
subclass of: SO_0000673
so part of: LOC101870134
location: 345629..347142
location: region:345629-347142:1
so has part: feature:345629-347142:1:exon

position:345629:1
position: 345629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345629-347142:1:exon

LOC101881675
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101881675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(403574..467485)
location: region:403574-467485:-1
so has part: feature:403574-467485:-1:exon
subclass of: SO_0000010

101881675
type: Gene
SIO_000068: ncbigene

position:403574:-1
position: 403574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467485:-1
position: 467485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403574-467485:-1:exon

LOC101881675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881675
product: myosin light chain 10, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 199 ESTs, 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031055089.2
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403574..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,451524..451703,467350..467485))
location: region:403574-467485:-1
so has part: feature:467350-467485:-1:exon
so has part: feature:451524-451703:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403574-404096:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:467350-467485:-1:exon

position:467350:-1
position: 467350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451524-451703:-1:exon

position:451524:-1
position: 451524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451703:-1
position: 451703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:418148-418234:-1:exon

position:418148:-1
position: 418148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418234:-1
position: 418234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:415346-415421:-1:exon

position:415346:-1
position: 415346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415421:-1
position: 415421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:413381-413485:-1:exon

position:413381:-1
position: 413381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413485:-1
position: 413485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:409864-409942:-1:exon

position:409864:-1
position: 409864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409942:-1
position: 409942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:404850-404898:-1:exon

position:404850:-1
position: 404850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404898:-1
position: 404898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:403574-404096:-1:exon

position:404096:-1
position: 404096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101881675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881675
product: myosin light chain 10, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 199 ESTs, 1 Protein, and 70% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031055090.1
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403574..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,449296..449315))
location: region:403574-449315:-1
so has part: feature:449296-449315:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403574-404096:-1:exon

position:449315:-1
position: 449315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449296-449315:-1:exon

position:449296:-1
position: 449296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418148-418234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403574-404096:-1:exon

LOC101881675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881675
product: myosin light chain 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 199 ESTs, 1 Protein, and 75% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031055088.1
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403574..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,426918..427109,428264..428298))
location: region:403574-428298:-1
so has part: feature:428264-428298:-1:exon
so has part: feature:426918-427109:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403574-404096:-1:exon

position:428298:-1
position: 428298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428264-428298:-1:exon

position:428264:-1
position: 428264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426918-427109:-1:exon

position:426918:-1
position: 426918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427109:-1
position: 427109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:418148-418234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:403574-404096:-1:exon

LOC101881675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881675
product: myosin light chain 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 199 ESTs, 20 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031055086.1
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403574..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,427399..427526))
location: region:403574-427526:-1
so has part: feature:427399-427526:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403574-404096:-1:exon

position:427526:-1
position: 427526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427399-427526:-1:exon

position:427399:-1
position: 427399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418148-418234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403574-404096:-1:exon

LOC101881675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881675
product: myosin light chain 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 199 ESTs, 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031055087.2
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403574..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,426918..427109,427399..427526))
location: region:403574-427526:-1
so has part: feature:427399-427526:-1:exon
so has part: feature:426918-427109:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403574-404096:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427399-427526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426918-427109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418148-418234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:403574-404096:-1:exon

LOC101881675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881675
product: myosin light chain 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 200 ESTs, 20 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005141366.1
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403574..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,425921..426104))
location: region:403574-426104:-1
so has part: feature:425921-426104:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403574-404096:-1:exon

position:426104:-1
position: 426104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425921-426104:-1:exon

position:425921:-1
position: 425921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418148-418234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403574-404096:-1:exon

LOC101881675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881675
product: myosin light chain 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 199 ESTs, 20 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031055085.1
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403574..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,419370..419440))
location: region:403574-419440:-1
so has part: feature:419370-419440:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403574-404096:-1:exon

position:419440:-1
position: 419440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419370-419440:-1:exon

position:419370:-1
position: 419370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418148-418234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403574-404096:-1:exon

LOC101881675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881675
product: myosin light chain 10, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 199 ESTs, 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031055091.2
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403574..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,418758..418811))
location: region:403574-418811:-1
so has part: feature:418758-418811:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403574-404096:-1:exon

position:418811:-1
position: 418811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418758-418811:-1:exon

position:418758:-1
position: 418758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418148-418234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403574-404096:-1:exon

LOC101881675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 10 isoform X2
translation: MPNSFVESGFNPGNLAPKKAKKKIEGGSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILNAFKIFDPEGKGHIKADYIKEMLMTQADRFSQEEIKQMFAAFPPDVSGNLDYKNLCYVITHGEEKD
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403998..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,427399..427443))
location: region:403998-427443:-1
so has part: feature:427399-427443:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403998-404096:-1:exon

XP_030910946.1
type: Protein
SIO_000068: ncbiprotein

position:403998:-1
position: 403998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427443:-1
position: 427443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427399-427443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418148-418234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403998-404096:-1:exon

LOC101881675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 10 isoform X3
translation: MAPKKAKKKIEGGSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILNAFKIFDPEGKGHIKADYIKEMLMTQADRFSQEEIKQMFAAFPPDVSGNLDYKNLCYVITHGEEKD
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403998..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,425921..425923))
location: region:403998-425923:-1
so has part: feature:425921-425923:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403998-404096:-1:exon

XP_005141423.1
type: Protein
SIO_000068: ncbiprotein

position:425923:-1
position: 425923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425921-425923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418148-418234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403998-404096:-1:exon

LOC101881675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 10 isoform X1
translation: MIKKKAVCLEGNSKGKAPKKAKKKIEGGSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILNAFKIFDPEGKGHIKADYIKEMLMTQADRFSQEEIKQMFAAFPPDVSGNLDYKNLCYVITHGEEKD
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403998..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418234,419370..419417))
location: region:403998-419417:-1
so has part: feature:419370-419417:-1:exon
so has part: feature:418148-418234:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403998-404096:-1:exon

XP_030910945.1
type: Protein
SIO_000068: ncbiprotein

position:419417:-1
position: 419417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419370-419417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418148-418234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:403998-404096:-1:exon

LOC101881675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 10 isoform X4
translation: MFEQTQIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILNAFKIFDPEGKGHIKADYIKEMLMTQADRFSQEEIKQMFAAFPPDVSGNLDYKNLCYVITHGEEKD
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403998..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418183))
location: region:403998-418183:-1
so has part: feature:418148-418183:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403998-404096:-1:exon

XP_030910947.1
type: Protein
SIO_000068: ncbiprotein

position:418183:-1
position: 418183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418148-418183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:403998-404096:-1:exon

LOC101881675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 10 isoform X4
translation: MFEQTQIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILNAFKIFDPEGKGHIKADYIKEMLMTQADRFSQEEIKQMFAAFPPDVSGNLDYKNLCYVITHGEEKD
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403998..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418183))
location: region:403998-418183:-1
so has part: feature:418148-418183:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403998-404096:-1:exon

XP_030910948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418148-418183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:403998-404096:-1:exon

LOC101881675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 10 isoform X4
translation: MFEQTQIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILNAFKIFDPEGKGHIKADYIKEMLMTQADRFSQEEIKQMFAAFPPDVSGNLDYKNLCYVITHGEEKD
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403998..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418183))
location: region:403998-418183:-1
so has part: feature:418148-418183:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403998-404096:-1:exon

XP_030910949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418148-418183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:403998-404096:-1:exon

LOC101881675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 10 isoform X4
translation: MFEQTQIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILNAFKIFDPEGKGHIKADYIKEMLMTQADRFSQEEIKQMFAAFPPDVSGNLDYKNLCYVITHGEEKD
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403998..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418183))
location: region:403998-418183:-1
so has part: feature:418148-418183:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403998-404096:-1:exon

XP_030910950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418148-418183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:403998-404096:-1:exon

LOC101881675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light chain 10 isoform X4
translation: MFEQTQIQEFKEAFTIMDQNRDGFIDKADLRDTFAALGRLNVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILNAFKIFDPEGKGHIKADYIKEMLMTQADRFSQEEIKQMFAAFPPDVSGNLDYKNLCYVITHGEEKD
SIO_010081: LOC101881675
subclass of: SO_0000673
so part of: LOC101881675
location: complement(join(403998..404096,404850..404898,409864..409942,413381..413485,415346..415421,418148..418183))
location: region:403998-418183:-1
so has part: feature:418148-418183:-1:exon
so has part: feature:415346-415421:-1:exon
so has part: feature:413381-413485:-1:exon
so has part: feature:409864-409942:-1:exon
so has part: feature:404850-404898:-1:exon
so has part: feature:403998-404096:-1:exon

XP_030910951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418148-418183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415346-415421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413381-413485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409864-409942:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404850-404898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:403998-404096:-1:exon

LOC101869968
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101869968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 534680..801446
location: region:534680-801446:1
so has part: feature:534680-801446:1:exon
subclass of: SO_0000010

101869968
type: Gene
SIO_000068: ncbigene

position:534680:1
position: 534680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801446:1
position: 801446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534680-801446:1:exon

LOC101869968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869968
product: cut like homeobox 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 8 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034068862.1
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534680..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,731202..731873,732868..732933,734384..734485,736702..737528,738886..739051,739705..739761,757632..757934,762254..762442,767166..767430,771563..772560)
location: region:534680-772560:1
so has part: feature:534680-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:731202-731873:1:exon
so has part: feature:732868-732933:1:exon
so has part: feature:734384-734485:1:exon
so has part: feature:736702-737528:1:exon
so has part: feature:738886-739051:1:exon
so has part: feature:739705-739761:1:exon
so has part: feature:757632-757934:1:exon
so has part: feature:762254-762442:1:exon
so has part: feature:767166-767430:1:exon
so has part: feature:771563-772560:1:exon

position:772560:1
position: 772560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534680-534823:1:exon

position:534823:1
position: 534823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

position:584777:1
position: 584777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584887:1
position: 584887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

position:642181:1
position: 642181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642228:1
position: 642228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

position:655208:1
position: 655208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655286:1
position: 655286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

position:668115:1
position: 668115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668252:1
position: 668252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

position:671548:1
position: 671548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671671:1
position: 671671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

position:673639:1
position: 673639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673715:1
position: 673715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

position:674516:1
position: 674516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674582:1
position: 674582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

position:706105:1
position: 706105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706153:1
position: 706153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

position:715278:1
position: 715278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715382:1
position: 715382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

position:718234:1
position: 718234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718422:1
position: 718422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

position:724024:1
position: 724024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724082:1
position: 724082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

position:728935:1
position: 728935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728983:1
position: 728983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

position:730002:1
position: 730002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730098:1
position: 730098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:731202-731873:1:exon

position:731202:1
position: 731202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731873:1
position: 731873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:732868-732933:1:exon

position:732868:1
position: 732868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732933:1
position: 732933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:734384-734485:1:exon

position:734384:1
position: 734384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734485:1
position: 734485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:736702-737528:1:exon

position:736702:1
position: 736702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737528:1
position: 737528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:738886-739051:1:exon

position:738886:1
position: 738886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739051:1
position: 739051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:739705-739761:1:exon

position:739705:1
position: 739705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739761:1
position: 739761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:757632-757934:1:exon

position:757632:1
position: 757632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757934:1
position: 757934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:762254-762442:1:exon

position:762254:1
position: 762254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762442:1
position: 762442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:767166-767430:1:exon

position:767166:1
position: 767166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767430:1
position: 767430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:771563-772560:1:exon

position:771563:1
position: 771563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101869968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869968
product: cut like homeobox 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 8 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034068863.1
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534680..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,731202..731873,732868..732933,734384..734485,736702..737528,738886..739051,757632..757934,762254..762442,767166..767430,771563..772560)
location: region:534680-772560:1
so has part: feature:534680-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:731202-731873:1:exon
so has part: feature:732868-732933:1:exon
so has part: feature:734384-734485:1:exon
so has part: feature:736702-737528:1:exon
so has part: feature:738886-739051:1:exon
so has part: feature:757632-757934:1:exon
so has part: feature:762254-762442:1:exon
so has part: feature:767166-767430:1:exon
so has part: feature:771563-772560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534680-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:731202-731873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:732868-732933:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734384-734485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:736702-737528:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:738886-739051:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:757632-757934:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:762254-762442:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:767166-767430:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:771563-772560:1:exon

LOC101869968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869968
product: cut like homeobox 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 8 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068865.1
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534680..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,731202..731873,732868..732933,734384..734485,757632..757934,762254..762442,767166..767430,771563..772560)
location: region:534680-772560:1
so has part: feature:534680-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:731202-731873:1:exon
so has part: feature:732868-732933:1:exon
so has part: feature:734384-734485:1:exon
so has part: feature:757632-757934:1:exon
so has part: feature:762254-762442:1:exon
so has part: feature:767166-767430:1:exon
so has part: feature:771563-772560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534680-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:731202-731873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:732868-732933:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734384-734485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:757632-757934:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:762254-762442:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:767166-767430:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:771563-772560:1:exon

LOC101869968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869968
product: cut like homeobox 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 8 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068864.1
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534680..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,731202..731873,734384..734485,736702..737528,738886..739051,739705..739761,757632..757934,762254..762442,767166..767430,771563..772560)
location: region:534680-772560:1
so has part: feature:534680-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:731202-731873:1:exon
so has part: feature:734384-734485:1:exon
so has part: feature:736702-737528:1:exon
so has part: feature:738886-739051:1:exon
so has part: feature:739705-739761:1:exon
so has part: feature:757632-757934:1:exon
so has part: feature:762254-762442:1:exon
so has part: feature:767166-767430:1:exon
so has part: feature:771563-772560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534680-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:731202-731873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734384-734485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:736702-737528:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:738886-739051:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:739705-739761:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:757632-757934:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:762254-762442:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:767166-767430:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:771563-772560:1:exon

LOC101869968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869968
product: cut like homeobox 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 8 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068867.1
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534680..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,731202..731873,734384..734485,736702..737528,738886..739051,757632..757934,762254..762442,767166..767430,771563..772560)
location: region:534680-772560:1
so has part: feature:534680-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:731202-731873:1:exon
so has part: feature:734384-734485:1:exon
so has part: feature:736702-737528:1:exon
so has part: feature:738886-739051:1:exon
so has part: feature:757632-757934:1:exon
so has part: feature:762254-762442:1:exon
so has part: feature:767166-767430:1:exon
so has part: feature:771563-772560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534680-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:731202-731873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734384-734485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:736702-737528:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:738886-739051:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:757632-757934:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:762254-762442:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:767166-767430:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:771563-772560:1:exon

LOC101869968
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869968
product: cut like homeobox 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068866.1
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534729..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,791556..791692,792159..792225,792457..792569,793104..793220,795194..795277,795564..795620,797526..797606,799350..799414,799730..801446)
location: region:534729-801446:1
so has part: feature:534729-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:791556-791692:1:exon
so has part: feature:792159-792225:1:exon
so has part: feature:792457-792569:1:exon
so has part: feature:793104-793220:1:exon
so has part: feature:795194-795277:1:exon
so has part: feature:795564-795620:1:exon
so has part: feature:797526-797606:1:exon
so has part: feature:799350-799414:1:exon
so has part: feature:799730-801446:1:exon

position:534729:1
position: 534729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534729-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:791556-791692:1:exon

position:791556:1
position: 791556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791692:1
position: 791692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:792159-792225:1:exon

position:792159:1
position: 792159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792225:1
position: 792225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:792457-792569:1:exon

position:792457:1
position: 792457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792569:1
position: 792569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:793104-793220:1:exon

position:793104:1
position: 793104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793220:1
position: 793220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:795194-795277:1:exon

position:795194:1
position: 795194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795277:1
position: 795277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:795564-795620:1:exon

position:795564:1
position: 795564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795620:1
position: 795620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:797526-797606:1:exon

position:797526:1
position: 797526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797606:1
position: 797606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:799350-799414:1:exon

position:799350:1
position: 799350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799414:1
position: 799414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:799730-801446:1:exon

position:799730:1
position: 799730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101869968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CASP isoform X5
translation: MAANVGSMFQYWKRFDLQQLQRELDATATILANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSVRCAELQIQLTEAVSTLGGQKELIAKLEHDLSTIQALSAVHRPDAEGAAEPRLEKIPEPIKEATALFYGHPQSPGTALPEGQVDSLLSIISSQRERFRARNQELEGENRMMQHTVHALQSELDNLRADNIKLYGKIKFLQSYPGQGGSRDDTEQRYSSQYEERLDPFSSFSRKERQRKYLSLSPWDKATLSMGRLILSNKTARTIAFFYTLFLHCLVFLVLYKTAWSESVGRDCAAYCAKKYADHIHRFHKDGDEGNMWQ
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534761..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,791556..791692,792159..792225,792457..792569,793104..793220,795194..795277,795564..795620,797526..797606,799350..799414,799730..799790)
location: region:534761-799790:1
so has part: feature:534761-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:791556-791692:1:exon
so has part: feature:792159-792225:1:exon
so has part: feature:792457-792569:1:exon
so has part: feature:793104-793220:1:exon
so has part: feature:795194-795277:1:exon
so has part: feature:795564-795620:1:exon
so has part: feature:797526-797606:1:exon
so has part: feature:799350-799414:1:exon
so has part: feature:799730-799790:1:exon

XP_033924757.1
type: Protein
SIO_000068: ncbiprotein

position:534761:1
position: 534761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799790:1
position: 799790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534761-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:791556-791692:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:792159-792225:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:792457-792569:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:793104-793220:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:795194-795277:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:795564-795620:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:797526-797606:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:799350-799414:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:799730-799790:1:exon

LOC101869968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X1
translation: MAANVGSMFQYWKRFDLQQLQRELDATATILANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGSARRKGKDQPESQRPATLPASPPSQLLRNTGEQASNTNGTHQFSPTGLSQDFFSSSLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRRNGSEGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSILQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKHSSVTDSSISALQNLSGLKKEPQEAPVLELHGVSDSAQGMLRHVKNELGRGGVWKDHWWNTVQHERRNTALPEDIKVEETSGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSELSMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVLPAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPTIETSKDGKSQESSEPPASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQAGSSDSPSARSSRAAHSSEGDSCDGVDAEGPAEGKASGPEADEYSNATTKSQGGPAESAFEAGEEALQGARSAESLEDTDDEGRLRAPRQGSPPASQRPGEAPETLPNSATEGDASTSAASTSVLTGESSYKSKESSEKTCSVPSTSSTPAAGSQKANSLQSLFGLSEAASSRNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534761..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,731202..731873,732868..732933,734384..734485,736702..737528,738886..739051,739705..739761,757632..757934,762254..762442,767166..767430,771563..772250)
location: region:534761-772250:1
so has part: feature:534761-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:731202-731873:1:exon
so has part: feature:732868-732933:1:exon
so has part: feature:734384-734485:1:exon
so has part: feature:736702-737528:1:exon
so has part: feature:738886-739051:1:exon
so has part: feature:739705-739761:1:exon
so has part: feature:757632-757934:1:exon
so has part: feature:762254-762442:1:exon
so has part: feature:767166-767430:1:exon
so has part: feature:771563-772250:1:exon

XP_033924753.1
type: Protein
SIO_000068: ncbiprotein

position:772250:1
position: 772250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534761-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:731202-731873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:732868-732933:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734384-734485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:736702-737528:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:738886-739051:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:739705-739761:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:757632-757934:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:762254-762442:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:767166-767430:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:771563-772250:1:exon

LOC101869968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X2
translation: MAANVGSMFQYWKRFDLQQLQRELDATATILANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGSARRKGKDQPESQRPATLPASPPSQLLRNTGEQASNTNGTHQFSPTGLSQDFFSSSLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRRNGSEGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSILQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKHSSVTDSSISALQNLSGLKKEPQEAPVLELHGVSDSAQGMLRHVKNELGRGGVWKDHWWNTVQHERRNTALPEDIKVEETSGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSELSMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVLPAQGQQQGQESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPTIETSKDGKSQESSEPPASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQAGSSDSPSARSSRAAHSSEGDSCDGVDAEGPAEGKASGPEADEYSNATTKSQGGPAESAFEAGEEALQGARSAESLEDTDDEGRLRAPRQGSPPASQRPGEAPETLPNSATEGDASTSAASTSVLTGESSYKSKESSEKTCSVPSTSSTPAAGSQKANSLQSLFGLSEAASSRNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534761..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,731202..731873,732868..732933,734384..734485,736702..737528,738886..739051,757632..757934,762254..762442,767166..767430,771563..772250)
location: region:534761-772250:1
so has part: feature:534761-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:731202-731873:1:exon
so has part: feature:732868-732933:1:exon
so has part: feature:734384-734485:1:exon
so has part: feature:736702-737528:1:exon
so has part: feature:738886-739051:1:exon
so has part: feature:757632-757934:1:exon
so has part: feature:762254-762442:1:exon
so has part: feature:767166-767430:1:exon
so has part: feature:771563-772250:1:exon

XP_033924754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534761-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:731202-731873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:732868-732933:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734384-734485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:736702-737528:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:738886-739051:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:757632-757934:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:762254-762442:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:767166-767430:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:771563-772250:1:exon

LOC101869968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X4
translation: MAANVGSMFQYWKRFDLQQLQRELDATATILANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGSARRKGKDQPESQRPATLPASPPSQLLRNTGEQASNTNGTHQFSPTGLSQDFFSSSLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRRNGSEGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPTIETSKDGKSQESSEPPASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQAGSSDSPSARSSRAAHSSEGDSCDGVDAEGPAEGKASGPEADEYSNATTKSQGGPAESAFEAGEEALQGARSAESLEDTDDEGRLRAPRQGSPPASQRPGEAPETLPNSATEGDASTSAASTSVLTGESSYKSKESSEKTCSVPSTSSTPAAGSQKANSLQSLFGLSEAASSRNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534761..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,731202..731873,732868..732933,734384..734485,757632..757934,762254..762442,767166..767430,771563..772250)
location: region:534761-772250:1
so has part: feature:534761-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:731202-731873:1:exon
so has part: feature:732868-732933:1:exon
so has part: feature:734384-734485:1:exon
so has part: feature:757632-757934:1:exon
so has part: feature:762254-762442:1:exon
so has part: feature:767166-767430:1:exon
so has part: feature:771563-772250:1:exon

XP_033924756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534761-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:731202-731873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:732868-732933:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:734384-734485:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:757632-757934:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:762254-762442:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:767166-767430:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:771563-772250:1:exon

LOC101869968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X3
translation: MAANVGSMFQYWKRFDLQQLQRELDATATILANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGSARRKGKDQPESQRPATLPASPPSQLLRNTGEQASNTNGTHQFSPTGLSQDFFSSSLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSILQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKHSSVTDSSISALQNLSGLKKEPQEAPVLELHGVSDSAQGMLRHVKNELGRGGVWKDHWWNTVQHERRNTALPEDIKVEETSGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSELSMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVLPAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPTIETSKDGKSQESSEPPASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQAGSSDSPSARSSRAAHSSEGDSCDGVDAEGPAEGKASGPEADEYSNATTKSQGGPAESAFEAGEEALQGARSAESLEDTDDEGRLRAPRQGSPPASQRPGEAPETLPNSATEGDASTSAASTSVLTGESSYKSKESSEKTCSVPSTSSTPAAGSQKANSLQSLFGLSEAASSRNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534761..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,731202..731873,734384..734485,736702..737528,738886..739051,739705..739761,757632..757934,762254..762442,767166..767430,771563..772250)
location: region:534761-772250:1
so has part: feature:534761-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:731202-731873:1:exon
so has part: feature:734384-734485:1:exon
so has part: feature:736702-737528:1:exon
so has part: feature:738886-739051:1:exon
so has part: feature:739705-739761:1:exon
so has part: feature:757632-757934:1:exon
so has part: feature:762254-762442:1:exon
so has part: feature:767166-767430:1:exon
so has part: feature:771563-772250:1:exon

XP_033924755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534761-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:731202-731873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734384-734485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:736702-737528:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:738886-739051:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:739705-739761:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:757632-757934:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:762254-762442:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:767166-767430:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:771563-772250:1:exon

LOC101869968
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein cut-like 1 isoform X6
translation: MAANVGSMFQYWKRFDLQQLQRELDATATILANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGSARRKGKDQPESQRPATLPASPPSQLLRNTGEQASNTNGTHQFSPTGLSQDFFSSSLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSILQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKHSSVTDSSISALQNLSGLKKEPQEAPVLELHGVSDSAQGMLRHVKNELGRGGVWKDHWWNTVQHERRNTALPEDIKVEETSGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSELSMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVLPAQGQQQGQESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPTIETSKDGKSQESSEPPASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQAGSSDSPSARSSRAAHSSEGDSCDGVDAEGPAEGKASGPEADEYSNATTKSQGGPAESAFEAGEEALQGARSAESLEDTDDEGRLRAPRQGSPPASQRPGEAPETLPNSATEGDASTSAASTSVLTGESSYKSKESSEKTCSVPSTSSTPAAGSQKANSLQSLFGLSEAASSRNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
SIO_010081: LOC101869968
subclass of: SO_0000673
so part of: LOC101869968
location: join(534761..534823,584777..584887,642181..642228,655208..655286,668115..668252,671548..671671,673639..673715,674516..674582,706105..706153,715278..715382,718234..718422,724024..724082,728935..728983,730002..730098,731202..731873,734384..734485,736702..737528,738886..739051,757632..757934,762254..762442,767166..767430,771563..772250)
location: region:534761-772250:1
so has part: feature:534761-534823:1:exon
so has part: feature:584777-584887:1:exon
so has part: feature:642181-642228:1:exon
so has part: feature:655208-655286:1:exon
so has part: feature:668115-668252:1:exon
so has part: feature:671548-671671:1:exon
so has part: feature:673639-673715:1:exon
so has part: feature:674516-674582:1:exon
so has part: feature:706105-706153:1:exon
so has part: feature:715278-715382:1:exon
so has part: feature:718234-718422:1:exon
so has part: feature:724024-724082:1:exon
so has part: feature:728935-728983:1:exon
so has part: feature:730002-730098:1:exon
so has part: feature:731202-731873:1:exon
so has part: feature:734384-734485:1:exon
so has part: feature:736702-737528:1:exon
so has part: feature:738886-739051:1:exon
so has part: feature:757632-757934:1:exon
so has part: feature:762254-762442:1:exon
so has part: feature:767166-767430:1:exon
so has part: feature:771563-772250:1:exon

XP_033924758.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534761-534823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584777-584887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642181-642228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655208-655286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668115-668252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671548-671671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673639-673715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674516-674582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706105-706153:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:715278-715382:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718234-718422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:724024-724082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:728935-728983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730002-730098:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:731202-731873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:734384-734485:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:736702-737528:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:738886-739051:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:757632-757934:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:762254-762442:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:767166-767430:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:771563-772250:1:exon

LOC101881507
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101881507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 811261..832434
location: region:811261-832434:1
so has part: feature:811261-832434:1:exon
subclass of: SO_0000010

101881507
type: Gene
SIO_000068: ncbigene

position:811261:1
position: 811261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832434:1
position: 832434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811261-832434:1:exon

LOC101881507
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881507
product: SH2B adaptor protein 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005141365.3
SIO_010081: LOC101881507
subclass of: SO_0000673
so part of: LOC101881507
location: join(811261..811390,820001..820889,823922..824023,827642..827733,829695..829787,830297..830476,830587..830780,831475..831646,832037..832434)
location: region:811261-832434:1
so has part: feature:811261-811390:1:exon
so has part: feature:820001-820889:1:exon
so has part: feature:823922-824023:1:exon
so has part: feature:827642-827733:1:exon
so has part: feature:829695-829787:1:exon
so has part: feature:830297-830476:1:exon
so has part: feature:830587-830780:1:exon
so has part: feature:831475-831646:1:exon
so has part: feature:832037-832434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811261-811390:1:exon

position:811390:1
position: 811390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:820001-820889:1:exon

position:820001:1
position: 820001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820889:1
position: 820889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823922-824023:1:exon

position:823922:1
position: 823922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824023:1
position: 824023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:827642-827733:1:exon

position:827642:1
position: 827642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827733:1
position: 827733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:829695-829787:1:exon

position:829695:1
position: 829695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829787:1
position: 829787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:830297-830476:1:exon

position:830297:1
position: 830297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830476:1
position: 830476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:830587-830780:1:exon

position:830587:1
position: 830587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830780:1
position: 830780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:831475-831646:1:exon

position:831475:1
position: 831475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831646:1
position: 831646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:832037-832434:1:exon

position:832037:1
position: 832037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101881507
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881507
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: SH2B adapter protein 2
translation: MNGDALCQEPSSPLPDWREFCELHAQAAAVDFAQKFCQFLKENPHYDTPGAEASFSHHFAANFLDIFSLEVSRVFVSDSPTKYNIVPFVGLQNCHVPYGREVVPRKEETSTESLDSMDTPMGAGRYLSPAQQVQARKVSSYGQSRSSEDVSIHAAAKPKFKKGFSLRNMSLCVVDGMKEMWHRKSSPEPGTEAAPSGRRAEREPWPAGGKEPGDPREKWTHKLRLSKVPSSKVELVDIQREGMLRYMVADDTNCVGSSQWQKCRLLLRKAVKVEGERFLLEFYVPPKASKPKVSIPLSAIIEVRTTMPLEMPDKDNTFVLKVENGAEYILETIDSLQKHSWVADIQDCIDPGDSGDDIELASCVQGACLPGRVSCSCEFLADDVPRPPDRCALPGAHTTTTTAPAVPAPHGRGRDSLGELLAHVPLESFLQTLESSPSSHLTGEDSEAEAEINLSAFPWFHGTLSRIKAAQLVLLGGARSHGLFVIRQSETRPGEYVLTFNFQGKAKHLRLSLNESGQCHVQHLWFQTIFDMLRHFHTHPIPLESGGAADITLRSYVVAQSPLPDAGPPPALVSQPPGCRLDLPPPHYLCSTAPSGPPAPPPAEGVAVAPTAAVPAPYHRLEGALGPRSRSDSLERRPEPPATSAEDYHDADSARSRTRAVENQYSFY
SIO_010081: LOC101881507
subclass of: SO_0000673
so part of: LOC101881507
location: join(820028..820889,823922..824023,827642..827733,829695..829787,830297..830476,830587..830780,831475..831646,832037..832352)
location: region:820028-832352:1
so has part: feature:820028-820889:1:exon
so has part: feature:823922-824023:1:exon
so has part: feature:827642-827733:1:exon
so has part: feature:829695-829787:1:exon
so has part: feature:830297-830476:1:exon
so has part: feature:830587-830780:1:exon
so has part: feature:831475-831646:1:exon
so has part: feature:832037-832352:1:exon

XP_005141422.2
type: Protein
SIO_000068: ncbiprotein

position:820028:1
position: 820028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832352:1
position: 832352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820028-820889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823922-824023:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827642-827733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:829695-829787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:830297-830476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830587-830780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831475-831646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:832037-832352:1:exon

LOC117436944
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117436944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 837802..846407
location: region:837802-846407:1
so has part: feature:837802-846407:1:exon
subclass of: SO_0000010

117436944
type: Gene
SIO_000068: ncbigene

position:837802:1
position: 837802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846407:1
position: 846407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837802-846407:1:exon

LOC117436944
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC117436944
product: PRKR interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 18 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034069031.1
SIO_010081: LOC117436944
subclass of: SO_0000673
so part of: LOC117436944
location: join(837802..837936,838973..839051,840407..840507,841262..841347,843146..843213,845665..846407)
location: region:837802-846407:1
so has part: feature:837802-837936:1:exon
so has part: feature:838973-839051:1:exon
so has part: feature:840407-840507:1:exon
so has part: feature:841262-841347:1:exon
so has part: feature:843146-843213:1:exon
so has part: feature:845665-846407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:837802-837936:1:exon

position:837936:1
position: 837936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838973-839051:1:exon

position:838973:1
position: 838973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839051:1
position: 839051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:840407-840507:1:exon

position:840407:1
position: 840407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840507:1
position: 840507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:841262-841347:1:exon

position:841262:1
position: 841262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841347:1
position: 841347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:843146-843213:1:exon

position:843146:1
position: 843146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843213:1
position: 843213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:845665-846407:1:exon

position:845665:1
position: 845665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117436944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC117436944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRKR-interacting protein 1
translation: MAAPSAPRPPRPRKEPQPLVIPRSAAEEQRLRLERLMRNPEKTVPIPEKLNEWAPRPPPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDFMDAMAEKQRLDEEFQKKLERNKMIAEEQTAKRRRKRQKLKEKKLQAKKNKLEQKKQEKEPDQSQEPASSEDDDEDSKEEEEKEDDAEEPSFVMGRG
SIO_010081: LOC117436944
subclass of: SO_0000673
so part of: LOC117436944
location: join(837817..837936,838973..839051,840407..840507,841262..841347,843146..843213,845665..845780)
location: region:837817-845780:1
so has part: feature:837817-837936:1:exon
so has part: feature:838973-839051:1:exon
so has part: feature:840407-840507:1:exon
so has part: feature:841262-841347:1:exon
so has part: feature:843146-843213:1:exon
so has part: feature:845665-845780:1:exon

XP_033924922.1
type: Protein
SIO_000068: ncbiprotein

position:837817:1
position: 837817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845780:1
position: 845780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837817-837936:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838973-839051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840407-840507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:841262-841347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:843146-843213:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845665-845780:1:exon

LOC101881342
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101881342
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 848965..859934
location: region:848965-859934:1
so has part: feature:848965-859934:1:exon
subclass of: SO_0000010

101881342
type: Gene
SIO_000068: ncbigene

position:848965:1
position: 848965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859934:1
position: 859934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:848965-859934:1:exon

LOC101881342
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881342
product: ORAI calcium release-activated calcium modulator 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005141364.3
SIO_010081: LOC101881342
subclass of: SO_0000673
so part of: LOC101881342
location: join(848965..849050,850463..850508,852191..852431,858139..859934)
location: region:848965-859934:1
so has part: feature:848965-849050:1:exon
so has part: feature:850463-850508:1:exon
so has part: feature:852191-852431:1:exon
so has part: feature:858139-859934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:848965-849050:1:exon

position:849050:1
position: 849050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:850463-850508:1:exon

position:850463:1
position: 850463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850508:1
position: 850508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:852191-852431:1:exon

position:852191:1
position: 852191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852431:1
position: 852431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:858139-859934:1:exon

position:858139:1
position: 858139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101881342
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881342
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein orai-2
translation: MSSELNVPVDPSTPACCSEPGTKGMDYRDWVRRSYLELVTSNHHSVQALSWRKLYLSRAKLKASSRTSALLSGFAMVAMVEVQLEVQYKYPQMLLIAFSACTTVLVAVHLFALLISTCILPNVEAVSNIHNLNSISESPHERMHPYIELAWGFSTVLGILLFLAEVVLLCWIKFLPVGSILKNETTNVEKASGHAGWQSALVSTIIMVPVGLIFVVFTIHFYRSLVRHKTERHNREIEELHKLKVQLDGHDRGLQVV
SIO_010081: LOC101881342
subclass of: SO_0000673
so part of: LOC101881342
location: join(852204..852431,858139..858685)
location: region:852204-858685:1
so has part: feature:852204-852431:1:exon
so has part: feature:858139-858685:1:exon

XP_005141421.1
type: Protein
SIO_000068: ncbiprotein

position:852204:1
position: 852204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858685:1
position: 858685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852204-852431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858139-858685:1:exon

LOC101869627
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101869627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(865453..867584)
location: region:865453-867584:-1
so has part: feature:865453-867584:-1:exon
subclass of: SO_0000010

101869627
type: Gene
SIO_000068: ncbigene

position:865453:-1
position: 865453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867584:-1
position: 867584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865453-867584:-1:exon

LOC101869627
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869627
product: alkB homolog 4, lysine demethylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068771.1
SIO_010081: LOC101869627
subclass of: SO_0000673
so part of: LOC101869627
location: complement(join(865453..866243,866679..866876,867409..867584))
location: region:865453-867584:-1
so has part: feature:867409-867584:-1:exon
so has part: feature:866679-866876:-1:exon
so has part: feature:865453-866243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867409-867584:-1:exon

position:867409:-1
position: 867409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:866679-866876:-1:exon

position:866679:-1
position: 866679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866876:-1
position: 866876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:865453-866243:-1:exon

position:866243:-1
position: 866243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101869627
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869627
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase alkB homolog 4
translation: MEAAGGRAGPGCGCKGIRSCLLCEGPAQAAPPPQGEDNFTYCPQTGLAKGNEHSEFAGWAFPFPGVLLMEEFISEDEESEMVELMDRDDWKLSQSGRKKQDYGPKVNFKKQRLKAGSFTGLPSFSKKIVAQMEACSVLGGFLPVEQCNLDYMPERGSAIDPHFDDWWLWGERLVSLNLLSETVLSMSCDSEDSIPLIPTSSKANGELNPPGSFPQTPHCQNPGEEGPDCALSPWLVPSREVTVAVPLPRRCLVVLYGEARYRWKHAIHRRHIQRRRICVTFRELSEEFRAGGKHEELGKELLGIALSFQGRPV
SIO_010081: LOC101869627
subclass of: SO_0000673
so part of: LOC101869627
location: complement(join(865602..866243,866679..866876,867409..867510))
location: region:865602-867510:-1
so has part: feature:867409-867510:-1:exon
so has part: feature:866679-866876:-1:exon
so has part: feature:865602-866243:-1:exon

XP_033924662.1
type: Protein
SIO_000068: ncbiprotein

position:865602:-1
position: 865602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867510:-1
position: 867510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867409-867510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:866679-866876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865602-866243:-1:exon

LOC101881175
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101881175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 867426..883428
location: region:867426-883428:1
so has part: feature:867426-883428:1:exon
subclass of: SO_0000010

101881175
type: Gene
SIO_000068: ncbigene

position:867426:1
position: 867426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883428:1
position: 883428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867426-883428:1:exon

LOC101881175
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881175
product: leucine rich repeats and WD repeat domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068769.1
SIO_010081: LOC101881175
subclass of: SO_0000673
so part of: LOC101881175
location: join(867426..867578,869714..869853,871883..872117,873101..873220,874619..874771,875490..875633,876258..876596,877212..877338,877572..877681,878125..878332,879822..879894,879989..880129,880783..880880,881342..881503,882168..882298,883050..883428)
location: region:867426-883428:1
so has part: feature:867426-867578:1:exon
so has part: feature:869714-869853:1:exon
so has part: feature:871883-872117:1:exon
so has part: feature:873101-873220:1:exon
so has part: feature:874619-874771:1:exon
so has part: feature:875490-875633:1:exon
so has part: feature:876258-876596:1:exon
so has part: feature:877212-877338:1:exon
so has part: feature:877572-877681:1:exon
so has part: feature:878125-878332:1:exon
so has part: feature:879822-879894:1:exon
so has part: feature:879989-880129:1:exon
so has part: feature:880783-880880:1:exon
so has part: feature:881342-881503:1:exon
so has part: feature:882168-882298:1:exon
so has part: feature:883050-883428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867426-867578:1:exon

position:867578:1
position: 867578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:869714-869853:1:exon

position:869714:1
position: 869714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869853:1
position: 869853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:871883-872117:1:exon

position:871883:1
position: 871883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872117:1
position: 872117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:873101-873220:1:exon

position:873101:1
position: 873101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873220:1
position: 873220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:874619-874771:1:exon

position:874619:1
position: 874619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874771:1
position: 874771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:875490-875633:1:exon

position:875490:1
position: 875490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875633:1
position: 875633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:876258-876596:1:exon

position:876258:1
position: 876258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876596:1
position: 876596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:877212-877338:1:exon

position:877212:1
position: 877212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877338:1
position: 877338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:877572-877681:1:exon

position:877572:1
position: 877572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877681:1
position: 877681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:878125-878332:1:exon

position:878125:1
position: 878125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878332:1
position: 878332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:879822-879894:1:exon

position:879822:1
position: 879822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879894:1
position: 879894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:879989-880129:1:exon

position:879989:1
position: 879989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880129:1
position: 880129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:880783-880880:1:exon

position:880783:1
position: 880783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880880:1
position: 880880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:881342-881503:1:exon

position:881342:1
position: 881342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881503:1
position: 881503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:882168-882298:1:exon

position:882168:1
position: 882168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882298:1
position: 882298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:883050-883428:1:exon

position:883050:1
position: 883050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101881175
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881175
product: leucine rich repeats and WD repeat domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068770.1
SIO_010081: LOC101881175
subclass of: SO_0000673
so part of: LOC101881175
location: join(867426..867578,869714..869853,871997..872117,873101..873220,874619..874771,875490..875633,876258..876596,877212..877338,877572..877681,878125..878332,879822..879894,879989..880129,880783..880880,881342..881503,882168..882298,883050..883428)
location: region:867426-883428:1
so has part: feature:867426-867578:1:exon
so has part: feature:869714-869853:1:exon
so has part: feature:871997-872117:1:exon
so has part: feature:873101-873220:1:exon
so has part: feature:874619-874771:1:exon
so has part: feature:875490-875633:1:exon
so has part: feature:876258-876596:1:exon
so has part: feature:877212-877338:1:exon
so has part: feature:877572-877681:1:exon
so has part: feature:878125-878332:1:exon
so has part: feature:879822-879894:1:exon
so has part: feature:879989-880129:1:exon
so has part: feature:880783-880880:1:exon
so has part: feature:881342-881503:1:exon
so has part: feature:882168-882298:1:exon
so has part: feature:883050-883428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867426-867578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:869714-869853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:871997-872117:1:exon

position:871997:1
position: 871997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:873101-873220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874619-874771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875490-875633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876258-876596:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:877212-877338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:877572-877681:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878125-878332:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:879822-879894:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:879989-880129:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:880783-880880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:881342-881503:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:882168-882298:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:883050-883428:1:exon

LOC101881175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and WD repeat-containing protein 1 isoform X1
translation: MSKITTELLLERAVPRSTRLRKIETLNLSKLQLKTGDLDPRLFSRLRHLQKLDLSDNLLDKFPNSLTLPDLRVLNCNNNKLEDVTALKQFPLLEELTYENNVYLTLNDDYKVMFLLQNLRLLNGKDITKLAKHVRHVNSRKLTSKVTAHWEKFFRDQLPEKHTAEQVKSIKKKFLKSVQTNVVCGPSSLSEFTRWRVKMIAEEFLAYSLGLELNSDPEPEEKMDENEEEESNESPREDAEDKGQVTVTARKRKRNCSKTRSRKKSKPQVTTEKEAVVNPRKSSHVQDEPAPEKPRTSNQPAKEVTPEQEAEETSKNGEQLPKGQSNRRSSQLTEEQKSQEQDNGVVTLTPVKNSKGKEDVSAEPLHFLQCHSKGNSREDFKTQLWSCVFEPLLDSGARKDPVVNSSRTVATCGGESVCLIDCETGTVLKKYKVAAEEFFSVAWTTLTMVISDSRKKSHNILAAAGRRGIVKLIHVAADFCYGEIKAHKKPIATLCFSPTRETHLFTASYDKRIALWDIGIPDSDYNFKASQLLVLEVLSIPLRIALVPTCPDQYLLAGCEGGCFAWNIKLAKEQKARPFEATFQFPDEDGSMTTSHRVDGLAFLNDDVVVSKSSKPGCIYVWSWSRSFDTKGKGCQRTIAAVILAELEWSTTDMSYLTLSTCPAKDYVFCGDEKGSVWMYNLSSYTKALSSAKGKRFPLQKKIAPAQVLQWPELRANGEQLTEVLVNNVVSDPSFTYLVVLTSVNITAIWKKS
SIO_010081: LOC101881175
subclass of: SO_0000673
so part of: LOC101881175
location: join(869774..869853,871883..872117,873101..873220,874619..874771,875490..875633,876258..876596,877212..877338,877572..877681,878125..878332,879822..879894,879989..880129,880783..880880,881342..881503,882168..882298,883050..883190)
location: region:869774-883190:1
so has part: feature:869774-869853:1:exon
so has part: feature:871883-872117:1:exon
so has part: feature:873101-873220:1:exon
so has part: feature:874619-874771:1:exon
so has part: feature:875490-875633:1:exon
so has part: feature:876258-876596:1:exon
so has part: feature:877212-877338:1:exon
so has part: feature:877572-877681:1:exon
so has part: feature:878125-878332:1:exon
so has part: feature:879822-879894:1:exon
so has part: feature:879989-880129:1:exon
so has part: feature:880783-880880:1:exon
so has part: feature:881342-881503:1:exon
so has part: feature:882168-882298:1:exon
so has part: feature:883050-883190:1:exon

XP_033924660.1
type: Protein
SIO_000068: ncbiprotein

position:869774:1
position: 869774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883190:1
position: 883190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869774-869853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871883-872117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873101-873220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874619-874771:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875490-875633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876258-876596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877212-877338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:877572-877681:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:878125-878332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:879822-879894:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:879989-880129:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:880783-880880:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:881342-881503:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:882168-882298:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:883050-883190:1:exon

LOC101881175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and WD repeat-containing protein 1 isoform X2
translation: MSKITTELLLERAVPRSTRLRKIETLNLTLPDLRVLNCNNNKLEDVTALKQFPLLEELTYENNVYLTLNDDYKVMFLLQNLRLLNGKDITKLAKHVRHVNSRKLTSKVTAHWEKFFRDQLPEKHTAEQVKSIKKKFLKSVQTNVVCGPSSLSEFTRWRVKMIAEEFLAYSLGLELNSDPEPEEKMDENEEEESNESPREDAEDKGQVTVTARKRKRNCSKTRSRKKSKPQVTTEKEAVVNPRKSSHVQDEPAPEKPRTSNQPAKEVTPEQEAEETSKNGEQLPKGQSNRRSSQLTEEQKSQEQDNGVVTLTPVKNSKGKEDVSAEPLHFLQCHSKGNSREDFKTQLWSCVFEPLLDSGARKDPVVNSSRTVATCGGESVCLIDCETGTVLKKYKVAAEEFFSVAWTTLTMVISDSRKKSHNILAAAGRRGIVKLIHVAADFCYGEIKAHKKPIATLCFSPTRETHLFTASYDKRIALWDIGIPDSDYNFKASQLLVLEVLSIPLRIALVPTCPDQYLLAGCEGGCFAWNIKLAKEQKARPFEATFQFPDEDGSMTTSHRVDGLAFLNDDVVVSKSSKPGCIYVWSWSRSFDTKGKGCQRTIAAVILAELEWSTTDMSYLTLSTCPAKDYVFCGDEKGSVWMYNLSSYTKALSSAKGKRFPLQKKIAPAQVLQWPELRANGEQLTEVLVNNVVSDPSFTYLVVLTSVNITAIWKKS
SIO_010081: LOC101881175
subclass of: SO_0000673
so part of: LOC101881175
location: join(869774..869853,871997..872117,873101..873220,874619..874771,875490..875633,876258..876596,877212..877338,877572..877681,878125..878332,879822..879894,879989..880129,880783..880880,881342..881503,882168..882298,883050..883190)
location: region:869774-883190:1
so has part: feature:869774-869853:1:exon
so has part: feature:871997-872117:1:exon
so has part: feature:873101-873220:1:exon
so has part: feature:874619-874771:1:exon
so has part: feature:875490-875633:1:exon
so has part: feature:876258-876596:1:exon
so has part: feature:877212-877338:1:exon
so has part: feature:877572-877681:1:exon
so has part: feature:878125-878332:1:exon
so has part: feature:879822-879894:1:exon
so has part: feature:879989-880129:1:exon
so has part: feature:880783-880880:1:exon
so has part: feature:881342-881503:1:exon
so has part: feature:882168-882298:1:exon
so has part: feature:883050-883190:1:exon

XP_033924661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:869774-869853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871997-872117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873101-873220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874619-874771:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875490-875633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876258-876596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:877212-877338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:877572-877681:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:878125-878332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:879822-879894:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:879989-880129:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:880783-880880:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:881342-881503:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:882168-882298:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:883050-883190:1:exon

LOC101869466
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101869466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(883330..886298)
location: region:883330-886298:-1
so has part: feature:883330-886298:-1:exon
subclass of: SO_0000010

101869466
type: Gene
SIO_000068: ncbigene

position:883330:-1
position: 883330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886298:-1
position: 886298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883330-886298:-1:exon

LOC101869466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869466
product: DNA-directed RNA polymerase II subunit RPB11-a
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034068772.1
SIO_010081: LOC101869466
subclass of: SO_0000673
so part of: LOC101869466
location: complement(join(883330..883831,885179..885354,885934..886023,886204..886298))
location: region:883330-886298:-1
so has part: feature:886204-886298:-1:exon
so has part: feature:885934-886023:-1:exon
so has part: feature:885179-885354:-1:exon
so has part: feature:883330-883831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:886204-886298:-1:exon

position:886204:-1
position: 886204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:885934-886023:-1:exon

position:885934:-1
position: 885934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886023:-1
position: 886023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:885179-885354:-1:exon

position:885179:-1
position: 885179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885354:-1
position: 885354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:883330-883831:-1:exon

position:883831:-1
position: 883831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101869466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869466
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB11-a
translation: MNAPPAFESFLLFEGEKKISINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
SIO_010081: LOC101869466
subclass of: SO_0000673
so part of: LOC101869466
location: complement(join(883796..883831,885179..885354,885934..886023,886204..886256))
location: region:883796-886256:-1
so has part: feature:886204-886256:-1:exon
so has part: feature:885934-886023:-1:exon
so has part: feature:885179-885354:-1:exon
so has part: feature:883796-883831:-1:exon

XP_033924663.1
type: Protein
SIO_000068: ncbiprotein

position:883796:-1
position: 883796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886256:-1
position: 886256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886204-886256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:885934-886023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885179-885354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883796-883831:-1:exon

LOC101869303
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101869303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(886926..896151)
location: region:886926-896151:-1
so has part: feature:886926-896151:-1:exon
subclass of: SO_0000010

101869303
type: Gene
SIO_000068: ncbigene

position:886926:-1
position: 886926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896151:-1
position: 896151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886926-896151:-1:exon

LOC101869303
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101869303
product: ras GTPase-activating protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034069079.1
SIO_010081: LOC101869303
subclass of: SO_0000673
so part of: LOC101869303
location: complement(join(886926..887047,887079..887194,887280..887400,887472..887607,887683..887820,887900..888217,888320..888457,888946..889132,889202..889314,889422..889486,889802..889955,890037..890160,890713..890804,890900..891031,891149..891230,891644..891770,891875..891936,892104..892217,892753..892809,896043..896151))
location: region:886926-896151:-1
so has part: feature:896043-896151:-1:exon
so has part: feature:892753-892809:-1:exon
so has part: feature:892104-892217:-1:exon
so has part: feature:891875-891936:-1:exon
so has part: feature:891644-891770:-1:exon
so has part: feature:891149-891230:-1:exon
so has part: feature:890900-891031:-1:exon
so has part: feature:890713-890804:-1:exon
so has part: feature:890037-890160:-1:exon
so has part: feature:889802-889955:-1:exon
so has part: feature:889422-889486:-1:exon
so has part: feature:889202-889314:-1:exon
so has part: feature:888946-889132:-1:exon
so has part: feature:888320-888457:-1:exon
so has part: feature:887900-888217:-1:exon
so has part: feature:887683-887820:-1:exon
so has part: feature:887472-887607:-1:exon
so has part: feature:887280-887400:-1:exon
so has part: feature:887079-887194:-1:exon
so has part: feature:886926-887047:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896043-896151:-1:exon

position:896043:-1
position: 896043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892753-892809:-1:exon

position:892753:-1
position: 892753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892809:-1
position: 892809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:892104-892217:-1:exon

position:892104:-1
position: 892104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892217:-1
position: 892217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:891875-891936:-1:exon

position:891875:-1
position: 891875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891936:-1
position: 891936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:891644-891770:-1:exon

position:891644:-1
position: 891644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891770:-1
position: 891770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:891149-891230:-1:exon

position:891149:-1
position: 891149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891230:-1
position: 891230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890900-891031:-1:exon

position:890900:-1
position: 890900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891031:-1
position: 891031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:890713-890804:-1:exon

position:890713:-1
position: 890713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890804:-1
position: 890804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:890037-890160:-1:exon

position:890037:-1
position: 890037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890160:-1
position: 890160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:889802-889955:-1:exon

position:889802:-1
position: 889802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889955:-1
position: 889955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:889422-889486:-1:exon

position:889422:-1
position: 889422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889486:-1
position: 889486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:889202-889314:-1:exon

position:889202:-1
position: 889202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889314:-1
position: 889314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:888946-889132:-1:exon

position:888946:-1
position: 888946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889132:-1
position: 889132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:888320-888457:-1:exon

position:888320:-1
position: 888320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888457:-1
position: 888457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:887900-888217:-1:exon

position:887900:-1
position: 887900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888217:-1
position: 888217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:887683-887820:-1:exon

position:887683:-1
position: 887683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887820:-1
position: 887820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:887472-887607:-1:exon

position:887472:-1
position: 887472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887607:-1
position: 887607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:887280-887400:-1:exon

position:887280:-1
position: 887280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887400:-1
position: 887400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:887079-887194:-1:exon

position:887079:-1
position: 887079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887194:-1
position: 887194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:886926-887047:-1:exon

position:887047:-1
position: 887047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101869303
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101869303
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein 4
translation: MAQRCALSIRIVEGKNLPAKDITGSSDPYCIVKVDDEAIIRTATVWKTLSPFWGEEYEVHLHPTFHSISIYVMDEDALSRDDVIGKVCITRDMLAEHPKGYSGWMSLSEVDPDEEVQGEIHLRVEVVGGPGRRLRCAVLEARDLARKDRNGASDPFVRLRYNGKTQESTVVKRSCYPRWNETFEFELAEPAGEKLCVEVWDWDLVGKNDFLGKVVFGVQGLAEAGQDEGWFRLRPDASKAREDGRRCSLGSLQLQLRLRDETVLPSHCYRPLVQLLCQEVQSGLQDGRVHLVTLLDEATTAECRQEVSISLVKLFLGQGLVKELLDLLFELELAKPCEPNTLFRSNSLASKSMESFLKVTGLPYLHTVLGPTINRVFEEKKHVELDPGKVETKDVGCSGLHRVQTEGEVIEQGRQHLQSYLQELLDAIVRSAPMCPPVIRAAFRLLFQRVGERFPQHQHIKFVAVTSFLCLRFFSPAIMTPKLFHLRDAHADARTGRTLLLLAKAIQMVGNMEPAAGRAKEQWLAPLLPTLQEGITRMKDFITRLVEMEEEEEEEGEGRPLPPPSAVLKEGLLFVHKTRGKGPLLSAASRKLHFCLTGESLSFSKSPGAEHCGAIALHDILAAEKVEEKSFGSSHVMQVVYMDAGGQQETAYLQCKCVNELNQWLSALRKVCGNNPRVLRAYHPGVFRGDKWSCCHQRDRMGPGCDRTRHGVTLQDWSDPMEPAVEAQRLFHHLQGLRDTLREKYWELLSGTQNGTQEGRWCWGCCGAGGAVGGAGGAVGGAPLPEGLRRLFGVLGELESCHRQAQPPAPPAPALLQLQT
SIO_010081: LOC101869303
subclass of: SO_0000673
so part of: LOC101869303
location: complement(join(886926..887047,887079..887194,887280..887400,887472..887607,887683..887820,887900..888217,888320..888457,888946..889132,889202..889314,889422..889486,889802..889955,890037..890160,890713..890804,890900..891031,891149..891230,891644..891770,891875..891936,892104..892217,892753..892809,896043..896107))
location: region:886926-896107:-1
so has part: feature:896043-896107:-1:exon
so has part: feature:892753-892809:-1:exon
so has part: feature:892104-892217:-1:exon
so has part: feature:891875-891936:-1:exon
so has part: feature:891644-891770:-1:exon
so has part: feature:891149-891230:-1:exon
so has part: feature:890900-891031:-1:exon
so has part: feature:890713-890804:-1:exon
so has part: feature:890037-890160:-1:exon
so has part: feature:889802-889955:-1:exon
so has part: feature:889422-889486:-1:exon
so has part: feature:889202-889314:-1:exon
so has part: feature:888946-889132:-1:exon
so has part: feature:888320-888457:-1:exon
so has part: feature:887900-888217:-1:exon
so has part: feature:887683-887820:-1:exon
so has part: feature:887472-887607:-1:exon
so has part: feature:887280-887400:-1:exon
so has part: feature:887079-887194:-1:exon
so has part: feature:886926-887047:-1:exon

XP_033924970.1
type: Protein
SIO_000068: ncbiprotein

position:896107:-1
position: 896107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896043-896107:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892753-892809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892104-892217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891875-891936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891644-891770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891149-891230:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890900-891031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890713-890804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890037-890160:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889802-889955:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:889422-889486:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:889202-889314:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:888946-889132:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:888320-888457:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:887900-888217:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:887683-887820:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:887472-887607:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887280-887400:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:887079-887194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:886926-887047:-1:exon

LOC115947568
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115947568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(898053..900058)
location: region:898053-900058:-1
so has part: feature:898053-900058:-1:exon
subclass of: SO_0000010

115947568
type: Gene
SIO_000068: ncbigene

position:898053:-1
position: 898053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900058:-1
position: 900058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898053-900058:-1:exon

LOC115947568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC115947568
product: uroplakin 3B like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068895.1
SIO_010081: LOC115947568
subclass of: SO_0000673
so part of: LOC115947568
location: complement(join(898053..898272,898360..898489,898728..898804,898887..899118,899373..899519,899841..900058))
location: region:898053-900058:-1
so has part: feature:899841-900058:-1:exon
so has part: feature:899373-899519:-1:exon
so has part: feature:898887-899118:-1:exon
so has part: feature:898728-898804:-1:exon
so has part: feature:898360-898489:-1:exon
so has part: feature:898053-898272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899841-900058:-1:exon

position:899841:-1
position: 899841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:899373-899519:-1:exon

position:899373:-1
position: 899373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899519:-1
position: 899519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:898887-899118:-1:exon

position:898887:-1
position: 898887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899118:-1
position: 899118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:898728-898804:-1:exon

position:898728:-1
position: 898728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898804:-1
position: 898804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:898360-898489:-1:exon

position:898360:-1
position: 898360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898489:-1
position: 898489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:898053-898272:-1:exon

position:898272:-1
position: 898272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115947568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC115947568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uroplakin-3b-like protein 2
translation: MLPGETGWTSLPRGCGQRWNVGGWGRPGSGGDTELIRPHCCPRHPGARTMLPLLLLLLPAAACGQDPRLYTPALSTLPLGGLTTTSTFVLDQPRCAFPNSLSDAVIWLVVAVPEGVPSFDRTLEPGSPDRAYQRFPANTSAYMTLNTTLLNYPCPKADGEISVLRVGSETSCQGDNTRPTCNGPLPGPGPYRVRFVAWDNSGPVAETKWSEPIYLQKATPQTSIPRKDRGHSAAMIALTSILTILFATLLAGLVAMLVCWGSDACGVSSTFSKPEAVTVQRYNTHHVYDHPPSRL
SIO_010081: LOC115947568
subclass of: SO_0000673
so part of: LOC115947568
location: complement(join(898167..898272,898360..898489,898728..898804,898887..899118,899373..899519,899841..900036))
location: region:898167-900036:-1
so has part: feature:899841-900036:-1:exon
so has part: feature:899373-899519:-1:exon
so has part: feature:898887-899118:-1:exon
so has part: feature:898728-898804:-1:exon
so has part: feature:898360-898489:-1:exon
so has part: feature:898167-898272:-1:exon

XP_033924786.1
type: Protein
SIO_000068: ncbiprotein

position:898167:-1
position: 898167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900036:-1
position: 900036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899841-900036:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:899373-899519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:898887-899118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898728-898804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:898360-898489:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:898167-898272:-1:exon

LOC101868961
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(900193..901748)
location: region:900193-901748:-1
so has part: feature:900193-901748:-1:exon
subclass of: SO_0000010

101868961
type: Gene
SIO_000068: ncbigene

position:900193:-1
position: 900193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901748:-1
position: 901748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900193-901748:-1:exon

LOC101868961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868961
product: uncharacterized LOC101868961
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034068896.1
SIO_010081: LOC101868961
subclass of: SO_0000673
so part of: LOC101868961
location: complement(join(900193..900378,900598..900718,901392..901541,901680..901748))
location: region:900193-901748:-1
so has part: feature:901680-901748:-1:exon
so has part: feature:901392-901541:-1:exon
so has part: feature:900598-900718:-1:exon
so has part: feature:900193-900378:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901680-901748:-1:exon

position:901680:-1
position: 901680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:901392-901541:-1:exon

position:901392:-1
position: 901392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901541:-1
position: 901541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:900598-900718:-1:exon

position:900598:-1
position: 900598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900718:-1
position: 900718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:900193-900378:-1:exon

position:900378:-1
position: 900378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101868961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101868961
translation: MELLRLLLALAGTGTALGLALLPYVPHVPTVALPGKLTATTFTLERPNCIFEQEAEAPDAVWLVVAFANASSLSTIDPLPVHRSSTVVVITSILASLGAVLAAAVLSAVGSKAWGSLCRRDSGTSTHRSYRTHHIPPALPRPPGCRCTPPGLGCFAPRPPAPCPAE
SIO_010081: LOC101868961
subclass of: SO_0000673
so part of: LOC101868961
location: complement(join(900207..900378,900598..900718,901392..901541,901680..901737))
location: region:900207-901737:-1
so has part: feature:901680-901737:-1:exon
so has part: feature:901392-901541:-1:exon
so has part: feature:900598-900718:-1:exon
so has part: feature:900207-900378:-1:exon

XP_033924787.1
type: Protein
SIO_000068: ncbiprotein

position:900207:-1
position: 900207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901737:-1
position: 901737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901680-901737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:901392-901541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900598-900718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900207-900378:-1:exon

LOC101881014
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101881014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(904262..937690)
location: region:904262-937690:-1
so has part: feature:904262-937690:-1:exon
subclass of: SO_0000010

101881014
type: Gene
SIO_000068: ncbigene

position:904262:-1
position: 904262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937690:-1
position: 937690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904262-937690:-1:exon

LOC101881014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881014
product: deltex E3 ubiquitin ligase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068748.1
SIO_010081: LOC101881014
subclass of: SO_0000673
so part of: LOC101881014
location: complement(join(904262..904916,905441..905530,906189..906350,906436..906594,907171..907241,908128..908172,914585..914716,920448..920506,927408..927987,932855..933210,937640..937690))
location: region:904262-937690:-1
so has part: feature:937640-937690:-1:exon
so has part: feature:932855-933210:-1:exon
so has part: feature:927408-927987:-1:exon
so has part: feature:920448-920506:-1:exon
so has part: feature:914585-914716:-1:exon
so has part: feature:908128-908172:-1:exon
so has part: feature:907171-907241:-1:exon
so has part: feature:906436-906594:-1:exon
so has part: feature:906189-906350:-1:exon
so has part: feature:905441-905530:-1:exon
so has part: feature:904262-904916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:937640-937690:-1:exon

position:937640:-1
position: 937640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:932855-933210:-1:exon

position:932855:-1
position: 932855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933210:-1
position: 933210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927408-927987:-1:exon

position:927408:-1
position: 927408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927987:-1
position: 927987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:920448-920506:-1:exon

position:920448:-1
position: 920448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920506:-1
position: 920506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:914585-914716:-1:exon

position:914585:-1
position: 914585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914716:-1
position: 914716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:908128-908172:-1:exon

position:908128:-1
position: 908128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908172:-1
position: 908172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:907171-907241:-1:exon

position:907171:-1
position: 907171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907241:-1
position: 907241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:906436-906594:-1:exon

position:906436:-1
position: 906436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906594:-1
position: 906594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:906189-906350:-1:exon

position:906189:-1
position: 906189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906350:-1
position: 906350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:905441-905530:-1:exon

position:905441:-1
position: 905441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905530:-1
position: 905530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:904262-904916:-1:exon

position:904916:-1
position: 904916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101881014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881014
product: deltex E3 ubiquitin ligase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068751.1
SIO_010081: LOC101881014
subclass of: SO_0000673
so part of: LOC101881014
location: complement(join(904628..904916,905441..905530,906189..906350,906436..906594,907171..907241,920448..920506,927408..927987,932855..933210,937640..937690))
location: region:904628-937690:-1
so has part: feature:937640-937690:-1:exon
so has part: feature:932855-933210:-1:exon
so has part: feature:927408-927987:-1:exon
so has part: feature:920448-920506:-1:exon
so has part: feature:907171-907241:-1:exon
so has part: feature:906436-906594:-1:exon
so has part: feature:906189-906350:-1:exon
so has part: feature:905441-905530:-1:exon
so has part: feature:904628-904916:-1:exon

position:904628:-1
position: 904628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:937640-937690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:932855-933210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927408-927987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920448-920506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:907171-907241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906436-906594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906189-906350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905441-905530:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:904628-904916:-1:exon

LOC101881014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881014
product: deltex E3 ubiquitin ligase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068750.1
SIO_010081: LOC101881014
subclass of: SO_0000673
so part of: LOC101881014
location: complement(join(904628..904916,905441..905530,906189..906350,906436..906594,907171..907241,908128..908172,920448..920506,927408..927987,932855..933210,937640..937690))
location: region:904628-937690:-1
so has part: feature:937640-937690:-1:exon
so has part: feature:932855-933210:-1:exon
so has part: feature:927408-927987:-1:exon
so has part: feature:920448-920506:-1:exon
so has part: feature:908128-908172:-1:exon
so has part: feature:907171-907241:-1:exon
so has part: feature:906436-906594:-1:exon
so has part: feature:906189-906350:-1:exon
so has part: feature:905441-905530:-1:exon
so has part: feature:904628-904916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:937640-937690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:932855-933210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927408-927987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920448-920506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:908128-908172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:907171-907241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906436-906594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:906189-906350:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905441-905530:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:904628-904916:-1:exon

LOC101881014
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881014
product: deltex E3 ubiquitin ligase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068749.1
SIO_010081: LOC101881014
subclass of: SO_0000673
so part of: LOC101881014
location: complement(join(904628..904916,905441..905530,906189..906350,906436..906594,907171..907241,914585..914716,920448..920506,927408..927987,932855..933210,937640..937690))
location: region:904628-937690:-1
so has part: feature:937640-937690:-1:exon
so has part: feature:932855-933210:-1:exon
so has part: feature:927408-927987:-1:exon
so has part: feature:920448-920506:-1:exon
so has part: feature:914585-914716:-1:exon
so has part: feature:907171-907241:-1:exon
so has part: feature:906436-906594:-1:exon
so has part: feature:906189-906350:-1:exon
so has part: feature:905441-905530:-1:exon
so has part: feature:904628-904916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:937640-937690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:932855-933210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927408-927987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920448-920506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914585-914716:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:907171-907241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906436-906594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:906189-906350:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905441-905530:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:904628-904916:-1:exon

LOC101881014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase DTX2 isoform X4
translation: MAAAQEAGSSSAGPSGLPSAPGHGSNSPVVAVWEWQDEFGRWRPYRGNVCSYIEQVFQASQQKGRRSGSGLVSSIPLGHADPVLAPYVIDIPSLTQFRQDTGTMRAVRRHLFPGDSAAGQGIIWEWQNDEGGWSPYEMKVCVLLEEARAKSHQQVDLKSLGYNYIVDVVAQVQTNKNTSFRRSVQRRLDTPYPVTTSPTPLHTGLACSCQQCWLTSGTGPITTRYRHSMINVPNASAAHQGRTASVSNSSVGFVPYNKPTLSGARSTPRLNAQSTWALPQVGGPSTGLSASNGVSAPALPVKMPKPSKVNQALAATPTEPEAVVKKYLEELKGSPADEDCIICMEKLSSPSGYADACECSTIKPETVGRLTSCQHSFHMLCMLAMYSNGNKDGSLQCPSCKTIYGEKTGTQPKGKMEVSTFPQSLPGHRDCGTIQIVYHISRGIQGPEHPNPGMPYTARGFPRYCYLPDNEKGRKVLELLRVAWKRRLIFTVGTSSTTGESNTVVWNEIHHKTEMNTNLSGHGYPDPNYLDNVLAELAAQGVTEDCLRQ
SIO_010081: LOC101881014
subclass of: SO_0000673
so part of: LOC101881014
location: complement(join(904692..904916,905441..905530,906189..906350,906436..906594,907171..907241,920448..920506,927408..927987,932855..933158))
location: region:904692-933158:-1
so has part: feature:932855-933158:-1:exon
so has part: feature:927408-927987:-1:exon
so has part: feature:920448-920506:-1:exon
so has part: feature:907171-907241:-1:exon
so has part: feature:906436-906594:-1:exon
so has part: feature:906189-906350:-1:exon
so has part: feature:905441-905530:-1:exon
so has part: feature:904692-904916:-1:exon

XP_033924642.1
type: Protein
SIO_000068: ncbiprotein

position:904692:-1
position: 904692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933158:-1
position: 933158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932855-933158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927408-927987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:920448-920506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907171-907241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:906436-906594:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906189-906350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:905441-905530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:904692-904916:-1:exon

LOC101881014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase DTX2 isoform X3
translation: MAAAQEAGSSSAGPSGLPSAPGHGSNSPVVAVWEWQDEFGRWRPYRGNVCSYIEQVFQASQQKGRRSGSGLVSSIPLGHADPVLAPYVIDIPSLTQFRQDTGTMRAVRRHLFPGDSAAGQGIIWEWQNDEGGWSPYEMKVCVLLEEARAKSHQQVDLKSLGYNYIVDVVAQVQTNKNTSFRRSVQRRLDTPYPVTTSPTPLHTGLACSCQQCWLTSGTGPITTRYRHSMINVPNASAAHQGRTASVSNSSVGFVPYNKPTLSGARSTPRLNAQSTWALPQVGGPSTGLSASNGVSAPALPVKMPKPSKVNQALAGWWRSLAASVTGLMTATPTEPEAVVKKYLEELKGSPADEDCIICMEKLSSPSGYADACECSTIKPETVGRLTSCQHSFHMLCMLAMYSNGNKDGSLQCPSCKTIYGEKTGTQPKGKMEVSTFPQSLPGHRDCGTIQIVYHISRGIQGPEHPNPGMPYTARGFPRYCYLPDNEKGRKVLELLRVAWKRRLIFTVGTSSTTGESNTVVWNEIHHKTEMNTNLSGHGYPDPNYLDNVLAELAAQGVTEDCLRQ
SIO_010081: LOC101881014
subclass of: SO_0000673
so part of: LOC101881014
location: complement(join(904692..904916,905441..905530,906189..906350,906436..906594,907171..907241,908128..908172,920448..920506,927408..927987,932855..933158))
location: region:904692-933158:-1
so has part: feature:932855-933158:-1:exon
so has part: feature:927408-927987:-1:exon
so has part: feature:920448-920506:-1:exon
so has part: feature:908128-908172:-1:exon
so has part: feature:907171-907241:-1:exon
so has part: feature:906436-906594:-1:exon
so has part: feature:906189-906350:-1:exon
so has part: feature:905441-905530:-1:exon
so has part: feature:904692-904916:-1:exon

XP_033924641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:932855-933158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927408-927987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:920448-920506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:908128-908172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:907171-907241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906436-906594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906189-906350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905441-905530:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:904692-904916:-1:exon

LOC101881014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase DTX2 isoform X2
translation: MAAAQEAGSSSAGPSGLPSAPGHGSNSPVVAVWEWQDEFGRWRPYRGNVCSYIEQVFQASQQKGRRSGSGLVSSIPLGHADPVLAPYVIDIPSLTQFRQDTGTMRAVRRHLFPGDSAAGQGIIWEWQNDEGGWSPYEMKVCVLLEEARAKSHQQVDLKSLGYNYIVDVVAQVQTNKNTSFRRSVQRRLDTPYPVTTSPTPLHTGLACSCQQCWLTSGTGPITTRYRHSMINVPNASAAHQGRTASVSNSSVGFVPYNKPTLSGARSTPRLNAQSTWALPQVGGPSTGLSASNGVSAPALPVKMPKPSKVNQALAGMTAILMSAAGLPVHLTCVLQAASTHKATKKHSSVKEGRKVSKKATPTEPEAVVKKYLEELKGSPADEDCIICMEKLSSPSGYADACECSTIKPETVGRLTSCQHSFHMLCMLAMYSNGNKDGSLQCPSCKTIYGEKTGTQPKGKMEVSTFPQSLPGHRDCGTIQIVYHISRGIQGPEHPNPGMPYTARGFPRYCYLPDNEKGRKVLELLRVAWKRRLIFTVGTSSTTGESNTVVWNEIHHKTEMNTNLSGHGYPDPNYLDNVLAELAAQGVTEDCLRQ
SIO_010081: LOC101881014
subclass of: SO_0000673
so part of: LOC101881014
location: complement(join(904692..904916,905441..905530,906189..906350,906436..906594,907171..907241,914585..914716,920448..920506,927408..927987,932855..933158))
location: region:904692-933158:-1
so has part: feature:932855-933158:-1:exon
so has part: feature:927408-927987:-1:exon
so has part: feature:920448-920506:-1:exon
so has part: feature:914585-914716:-1:exon
so has part: feature:907171-907241:-1:exon
so has part: feature:906436-906594:-1:exon
so has part: feature:906189-906350:-1:exon
so has part: feature:905441-905530:-1:exon
so has part: feature:904692-904916:-1:exon

XP_033924640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:932855-933158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927408-927987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:920448-920506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914585-914716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:907171-907241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906436-906594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906189-906350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905441-905530:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:904692-904916:-1:exon

LOC101881014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase DTX2 isoform X1
translation: MAAAQEAGSSSAGPSGLPSAPGHGSNSPVVAVWEWQDEFGRWRPYRGNVCSYIEQVFQASQQKGRRSGSGLVSSIPLGHADPVLAPYVIDIPSLTQFRQDTGTMRAVRRHLFPGDSAAGQGIIWEWQNDEGGWSPYEMKVCVLLEEARAKSHQQVDLKSLGYNYIVDVVAQVQTNKNTSFRRSVQRRLDTPYPVTTSPTPLHTGLACSCQQCWLTSGTGPITTRYRHSMINVPNASAAHQGRTASVSNSSVGFVPYNKPTLSGARSTPRLNAQSTWALPQVGGPSTGLSASNGVSAPALPVKMPKPSKVNQALAGMTAILMSAAGLPVHLTCVLQAASTHKATKKHSSVKEGRKVSKKGWWRSLAASVTGLMTATPTEPEAVVKKYLEELKGSPADEDCIICMEKLSSPSGYADACECSTIKPETVGRLTSCQHSFHMLCMLAMYSNGNKDGSLQCPSCKTIYGEKTGTQPKGKMEVSTFPQSLPGHRDCGTIQIVYHISRGIQGPEHPNPGMPYTARGFPRYCYLPDNEKGRKVLELLRVAWKRRLIFTVGTSSTTGESNTVVWNEIHHKTEMNTNLSGHGYPDPNYLDNVLAELAAQGVTEDCLRQ
SIO_010081: LOC101881014
subclass of: SO_0000673
so part of: LOC101881014
location: complement(join(904692..904916,905441..905530,906189..906350,906436..906594,907171..907241,908128..908172,914585..914716,920448..920506,927408..927987,932855..933158))
location: region:904692-933158:-1
so has part: feature:932855-933158:-1:exon
so has part: feature:927408-927987:-1:exon
so has part: feature:920448-920506:-1:exon
so has part: feature:914585-914716:-1:exon
so has part: feature:908128-908172:-1:exon
so has part: feature:907171-907241:-1:exon
so has part: feature:906436-906594:-1:exon
so has part: feature:906189-906350:-1:exon
so has part: feature:905441-905530:-1:exon
so has part: feature:904692-904916:-1:exon

XP_033924639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:932855-933158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927408-927987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:920448-920506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914585-914716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:908128-908172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:907171-907241:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906436-906594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:906189-906350:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905441-905530:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:904692-904916:-1:exon

LOC101868791
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 944549..954467
location: region:944549-954467:1
so has part: feature:944549-954467:1:exon
subclass of: SO_0000010

101868791
type: Gene
SIO_000068: ncbigene

position:944549:1
position: 944549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954467:1
position: 954467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944549-954467:1:exon

LOC101868791
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868791
product: scavenger receptor cysteine rich family member with 4 domains
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034068941.1
SIO_010081: LOC101868791
subclass of: SO_0000673
so part of: LOC101868791
location: join(944549..944639,947818..947853,948485..948790,950166..950237,950550..950864,951668..951748,951999..952073,952628..952939,953512..953589,954151..954467)
location: region:944549-954467:1
so has part: feature:944549-944639:1:exon
so has part: feature:947818-947853:1:exon
so has part: feature:948485-948790:1:exon
so has part: feature:950166-950237:1:exon
so has part: feature:950550-950864:1:exon
so has part: feature:951668-951748:1:exon
so has part: feature:951999-952073:1:exon
so has part: feature:952628-952939:1:exon
so has part: feature:953512-953589:1:exon
so has part: feature:954151-954467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944549-944639:1:exon

position:944639:1
position: 944639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:947818-947853:1:exon

position:947818:1
position: 947818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947853:1
position: 947853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:948485-948790:1:exon

position:948485:1
position: 948485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948790:1
position: 948790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:950166-950237:1:exon

position:950166:1
position: 950166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950237:1
position: 950237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:950550-950864:1:exon

position:950550:1
position: 950550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950864:1
position: 950864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:951668-951748:1:exon

position:951668:1
position: 951668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951748:1
position: 951748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:951999-952073:1:exon

position:951999:1
position: 951999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952073:1
position: 952073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:952628-952939:1:exon

position:952628:1
position: 952628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952939:1
position: 952939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:953512-953589:1:exon

position:953512:1
position: 953512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953589:1
position: 953589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:954151-954467:1:exon

position:954151:1
position: 954151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868791
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor cysteine-rich domain-containing group B protein
translation: MALLHQRTLRPSAAASAMLGPLGCWARSQTGTSSEPALLPFPEIRLSNGPSRCQGRVEIFYNGSWGTVCDDDWDLMDATVVCRQLGCGHPITLPPAIAFGQGSGPIFLDNVDCKGWEVALSECWSHGWGIHNCYHYEDVAVVCNELSPTQASEGPTSRTLTASVQDGERDGSIRLVSGTDSCRGRVEIFYRGSWGTVCDDDWGLSDASVVCKQLGCGQALDYKSNAYFGYGKGLILLDNVNCDGSESFLSACYSLGWGIHNCGHHEDAGVICAGLDTSTITSFTTSGGLDYEETFTATATVTGSRDQPSEATEVLTTALLTIEQEGTDVRLSSGNGSCRGRVEVRHRGTWGTVCDDDWDYPDAAVVCRQLGCGAALAATVLGSFGYGSGPVLLDNVGCAGSEERLQDCFHLGWGQHNCGHHEDAGVICQDPDDAGDHSQEATTTTTTLTSTRPKDGSLRLVNGSHRCEGRVELFLLSQWGTVCDDAWDLRDARVVCRQLGCGQAVAAWGDARYGQGTGYIFLDNLKCKGHEASLLRCSHIRWDVHNCDHAEDAGAACSIR
SIO_010081: LOC101868791
subclass of: SO_0000673
so part of: LOC101868791
location: join(944549..944639,947818..947853,948485..948790,950166..950237,950550..950864,951668..951748,951999..952073,952628..952939,953512..953589,954151..954467)
location: region:944549-954467:1
so has part: feature:944549-944639:1:exon
so has part: feature:947818-947853:1:exon
so has part: feature:948485-948790:1:exon
so has part: feature:950166-950237:1:exon
so has part: feature:950550-950864:1:exon
so has part: feature:951668-951748:1:exon
so has part: feature:951999-952073:1:exon
so has part: feature:952628-952939:1:exon
so has part: feature:953512-953589:1:exon
so has part: feature:954151-954467:1:exon

XP_033924832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:944549-944639:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:947818-947853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:948485-948790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:950166-950237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:950550-950864:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:951668-951748:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:951999-952073:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:952628-952939:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:953512-953589:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:954151-954467:1:exon

LOC101868619
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 963955..983553
location: region:963955-983553:1
so has part: feature:963955-983553:1:exon
subclass of: SO_0000010

101868619
type: Gene
SIO_000068: ncbigene

position:963955:1
position: 963955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983553:1
position: 983553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963955-983553:1:exon

LOC101868619
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868619
product: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs, 38 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068908.1
SIO_010081: LOC101868619
subclass of: SO_0000673
so part of: LOC101868619
location: join(963955..964205,980030..983553)
location: region:963955-983553:1
so has part: feature:963955-964205:1:exon
so has part: feature:980030-983553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963955-964205:1:exon

position:964205:1
position: 964205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:980030-983553:1:exon

position:980030:1
position: 980030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868619
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein gamma
translation: MVDREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGEGNN
SIO_010081: LOC101868619
subclass of: SO_0000673
so part of: LOC101868619
location: join(964119..964205,980030..980686)
location: region:964119-980686:1
so has part: feature:964119-964205:1:exon
so has part: feature:980030-980686:1:exon

XP_033924799.1
type: Protein
SIO_000068: ncbiprotein

position:964119:1
position: 964119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980686:1
position: 980686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964119-964205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:980030-980686:1:exon

LOC101870190
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101870190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(985788..987949)
location: region:985788-987949:-1
so has part: feature:985788-987949:-1:exon
subclass of: SO_0000010

101870190
type: Gene
SIO_000068: ncbigene

position:985788:-1
position: 985788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987949:-1
position: 987949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985788-987949:-1:exon

LOC101870190
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101870190
product: heat shock protein family B (small) member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068909.1
SIO_010081: LOC101870190
subclass of: SO_0000673
so part of: LOC101870190
location: complement(join(985788..986124,986542..986605,987429..987949))
location: region:985788-987949:-1
so has part: feature:987429-987949:-1:exon
so has part: feature:986542-986605:-1:exon
so has part: feature:985788-986124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:987429-987949:-1:exon

position:987429:-1
position: 987429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:986542-986605:-1:exon

position:986542:-1
position: 986542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986605:-1
position: 986605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:985788-986124:-1:exon

position:986124:-1
position: 986124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101870190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101870190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock protein beta-1
translation: MAERRVPFTFLRSPSWDPFRDWYHGSRLFDQSFGMPHIPEDWYKWPSGSAWPGYFRLLPRESALLPAPGSPYGQALSRQLSSGISEIRQTADSWKVTLDVNHFAPEELVVKTKDNIVEITGKHEEKQDEHGFISRCFTRKYTLPPGVEATAVRSSLSPDGMLTVEAPLPKPAIQSAEITIPVTVESQAKEPAKK
SIO_010081: LOC101870190
subclass of: SO_0000673
so part of: LOC101870190
location: complement(join(985965..986124,986542..986605,987429..987789))
location: region:985965-987789:-1
so has part: feature:987429-987789:-1:exon
so has part: feature:986542-986605:-1:exon
so has part: feature:985965-986124:-1:exon

XP_033924800.1
type: Protein
SIO_000068: ncbiprotein

position:985965:-1
position: 985965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987789:-1
position: 987789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987429-987789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986542-986605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985965-986124:-1:exon

LOC101870357
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101870357
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(991052..1010610)
location: region:991052-1010610:-1
so has part: feature:991052-1010610:-1:exon
subclass of: SO_0000010

101870357
type: Gene
SIO_000068: ncbigene

position:991052:-1
position: 991052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010610:-1
position: 1010610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991052-1010610:-1:exon

LOC101870357
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101870357
product: serine/arginine repetitive matrix 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034069028.1
SIO_010081: LOC101870357
subclass of: SO_0000673
so part of: LOC101870357
location: complement(join(991052..991274,992919..993056,993341..993568,994251..994579,1000382..1000553,1001447..1001551,1001644..1001694,1002258..1002293,1002539..1002630,1002978..1002993,1003310..1003390,1003506..1003640,1007211..1007312,1010387..1010610))
location: region:991052-1010610:-1
so has part: feature:1010387-1010610:-1:exon
so has part: feature:1007211-1007312:-1:exon
so has part: feature:1003506-1003640:-1:exon
so has part: feature:1003310-1003390:-1:exon
so has part: feature:1002978-1002993:-1:exon
so has part: feature:1002539-1002630:-1:exon
so has part: feature:1002258-1002293:-1:exon
so has part: feature:1001644-1001694:-1:exon
so has part: feature:1001447-1001551:-1:exon
so has part: feature:1000382-1000553:-1:exon
so has part: feature:994251-994579:-1:exon
so has part: feature:993341-993568:-1:exon
so has part: feature:992919-993056:-1:exon
so has part: feature:991052-991274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010387-1010610:-1:exon

position:1010387:-1
position: 1010387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1007211-1007312:-1:exon

position:1007211:-1
position: 1007211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007312:-1
position: 1007312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1003506-1003640:-1:exon

position:1003506:-1
position: 1003506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003640:-1
position: 1003640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1003310-1003390:-1:exon

position:1003310:-1
position: 1003310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003390:-1
position: 1003390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1002978-1002993:-1:exon

position:1002978:-1
position: 1002978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002993:-1
position: 1002993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1002539-1002630:-1:exon

position:1002539:-1
position: 1002539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002630:-1
position: 1002630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1002258-1002293:-1:exon

position:1002258:-1
position: 1002258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002293:-1
position: 1002293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1001644-1001694:-1:exon

position:1001644:-1
position: 1001644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001694:-1
position: 1001694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1001447-1001551:-1:exon

position:1001447:-1
position: 1001447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001551:-1
position: 1001551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1000382-1000553:-1:exon

position:1000382:-1
position: 1000382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000553:-1
position: 1000553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:994251-994579:-1:exon

position:994251:-1
position: 994251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994579:-1
position: 994579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:993341-993568:-1:exon

position:993341:-1
position: 993341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993568:-1
position: 993568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:992919-993056:-1:exon

position:992919:-1
position: 992919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993056:-1
position: 993056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:991052-991274:-1:exon

position:991274:-1
position: 991274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101870357
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101870357
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 3
translation: MALYNNGAEVPSPQEASNGFSQPGASGTWHKGEEEARLAEPPLVKKAHREILDHERKRRVELKCMELQEMMEEQGYSEEEIRQKVGTFRQMLMEKEGVLTREDQHGRQIVIENHHGVDGEEYAVEYPDSGEGCLLQCDCSAECYRQDSGHREYRLKRRSSSSTSPPPKKKKKKKSGHRRSRKKRKPGTRFPPSSCDSSSPIRKEKKKKTGKKHRRDRSESGSRKKRRHRSRSPKSKRKEKNKERKRSRSESPAWRSHRRSSCSSHSASLSSDGSSSKSPGRLSPKRRQDGPKGSSARSSRSPSSPSPQRSASPHQNGHKGSAQNGRHSHGAAPPEPSDRPASASPSPRTHGRTDPASSPRPRGGRHGARSPRSPSPERGKHGHRHRSRSASPPRHRGQSKARPPAPREPAGAALSPAGDSSDSEGSEGSGSHPYHPPLGADRNHGAKKVKDRHHRGRPNSSSESSAKHSRHASERRKSPSPSPGQRSTSWSSSGSLSKSRSRSRDKRAGRSRSRSPSPKKTASREKDNEPRTRHGDPDPTRARRRSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSSSSLSTYSYSRSRSRSYDSYNSSSRSRSRTRSPPSRSRSPPSRSPSYNSRSSSESAGF
SIO_010081: LOC101870357
subclass of: SO_0000673
so part of: LOC101870357
location: complement(join(991052..991274,992919..993056,993341..993568,994251..994579,1000382..1000553,1001447..1001551,1001644..1001694,1002258..1002293,1002539..1002630,1002978..1002993,1003310..1003390,1003506..1003640,1007211..1007312,1010387..1010610))
location: region:991052-1010610:-1
so has part: feature:1010387-1010610:-1:exon
so has part: feature:1007211-1007312:-1:exon
so has part: feature:1003506-1003640:-1:exon
so has part: feature:1003310-1003390:-1:exon
so has part: feature:1002978-1002993:-1:exon
so has part: feature:1002539-1002630:-1:exon
so has part: feature:1002258-1002293:-1:exon
so has part: feature:1001644-1001694:-1:exon
so has part: feature:1001447-1001551:-1:exon
so has part: feature:1000382-1000553:-1:exon
so has part: feature:994251-994579:-1:exon
so has part: feature:993341-993568:-1:exon
so has part: feature:992919-993056:-1:exon
so has part: feature:991052-991274:-1:exon

XP_033924919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1010387-1010610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007211-1007312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1003506-1003640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1003310-1003390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1002978-1002993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1002539-1002630:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1002258-1002293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1001644-1001694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1001447-1001551:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1000382-1000553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:994251-994579:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:993341-993568:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:992919-993056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:991052-991274:-1:exon

LOC101867721
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101867721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1023240..1031415)
location: region:1023240-1031415:-1
so has part: feature:1023240-1031415:-1:exon
subclass of: SO_0000010

101867721
type: Gene
SIO_000068: ncbigene

position:1023240:-1
position: 1023240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031415:-1
position: 1031415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023240-1031415:-1:exon

LOC101867721
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101867721
product: malate dehydrogenase 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034068914.1
SIO_010081: LOC101867721
subclass of: SO_0000673
so part of: LOC101867721
location: complement(join(1023240..1023550,1024552..1024703,1025140..1025239,1026371..1026448,1027113..1027237,1027708..1027821,1028763..1028846,1029618..1029786,1031270..1031415))
location: region:1023240-1031415:-1
so has part: feature:1031270-1031415:-1:exon
so has part: feature:1029618-1029786:-1:exon
so has part: feature:1028763-1028846:-1:exon
so has part: feature:1027708-1027821:-1:exon
so has part: feature:1027113-1027237:-1:exon
so has part: feature:1026371-1026448:-1:exon
so has part: feature:1025140-1025239:-1:exon
so has part: feature:1024552-1024703:-1:exon
so has part: feature:1023240-1023550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1031270-1031415:-1:exon

position:1031270:-1
position: 1031270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1029618-1029786:-1:exon

position:1029618:-1
position: 1029618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029786:-1
position: 1029786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1028763-1028846:-1:exon

position:1028763:-1
position: 1028763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028846:-1
position: 1028846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1027708-1027821:-1:exon

position:1027708:-1
position: 1027708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027821:-1
position: 1027821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1027113-1027237:-1:exon

position:1027113:-1
position: 1027113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027237:-1
position: 1027237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1026371-1026448:-1:exon

position:1026371:-1
position: 1026371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026448:-1
position: 1026448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1025140-1025239:-1:exon

position:1025140:-1
position: 1025140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025239:-1
position: 1025239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1024552-1024703:-1:exon

position:1024552:-1
position: 1024552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024703:-1
position: 1024703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1023240-1023550:-1:exon

position:1023550:-1
position: 1023550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101867721
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101867721
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: malate dehydrogenase, mitochondrial
translation: MLSRIARPVAAAGAGYRYRCLRRGLATSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSKLSLYDIAHTPGVAADLSHIETKANVKGFMGPEQLPECLKGCNVVVIPAGVPRKPGMTRDDLFNTNASIVATLTSACAKHCPEAMICIISNPVSKFTIPITSEVFKKHGVYNPKKIFGVTTLDIVRANTFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLVKLTGRIQEAGTEVVQAKAGAGSATLSMAYAGARFVFSLLNAINGKEGVIECAFVRSDETESPYFSTPLLLGKNGIEKNLGIGKITSFEQKMVADAMSELKASIKKGEEFAKNFK
SIO_010081: LOC101867721
subclass of: SO_0000673
so part of: LOC101867721
location: complement(join(1023419..1023550,1024552..1024703,1025140..1025239,1026371..1026448,1027113..1027237,1027708..1027821,1028763..1028846,1029618..1029786,1031270..1031360))
location: region:1023419-1031360:-1
so has part: feature:1031270-1031360:-1:exon
so has part: feature:1029618-1029786:-1:exon
so has part: feature:1028763-1028846:-1:exon
so has part: feature:1027708-1027821:-1:exon
so has part: feature:1027113-1027237:-1:exon
so has part: feature:1026371-1026448:-1:exon
so has part: feature:1025140-1025239:-1:exon
so has part: feature:1024552-1024703:-1:exon
so has part: feature:1023419-1023550:-1:exon

XP_033924805.1
type: Protein
SIO_000068: ncbiprotein

position:1023419:-1
position: 1023419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031360:-1
position: 1031360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1031270-1031360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029618-1029786:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1028763-1028846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1027708-1027821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1027113-1027237:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026371-1026448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025140-1025239:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1024552-1024703:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023419-1023550:-1:exon

LOC101881770
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101881770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1055849..1060843)
location: region:1055849-1060843:-1
so has part: feature:1055849-1060843:-1:exon
subclass of: SO_0000010

101881770
type: Gene
SIO_000068: ncbigene

position:1055849:-1
position: 1055849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060843:-1
position: 1060843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055849-1060843:-1:exon

LOC101881770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881770
product: rhomboid domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034069073.1
SIO_010081: LOC101881770
subclass of: SO_0000673
so part of: LOC101881770
location: complement(join(1055849..1056708,1058782..1058932,1059285..1059686,1060680..1060843))
location: region:1055849-1060843:-1
so has part: feature:1060680-1060843:-1:exon
so has part: feature:1059285-1059686:-1:exon
so has part: feature:1058782-1058932:-1:exon
so has part: feature:1055849-1056708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060680-1060843:-1:exon

position:1060680:-1
position: 1060680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059285-1059686:-1:exon

position:1059285:-1
position: 1059285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059686:-1
position: 1059686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1058782-1058932:-1:exon

position:1058782:-1
position: 1058782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058932:-1
position: 1058932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1055849-1056708:-1:exon

position:1056708:-1
position: 1056708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101881770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881770
product: rhomboid domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034069072.1
SIO_010081: LOC101881770
subclass of: SO_0000673
so part of: LOC101881770
location: complement(join(1055849..1056708,1058782..1058932,1059285..1059926,1060680..1060784))
location: region:1055849-1060784:-1
so has part: feature:1060680-1060784:-1:exon
so has part: feature:1059285-1059926:-1:exon
so has part: feature:1058782-1058932:-1:exon
so has part: feature:1055849-1056708:-1:exon

position:1060784:-1
position: 1060784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060680-1060784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059285-1059926:-1:exon

position:1059926:-1
position: 1059926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1058782-1058932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055849-1056708:-1:exon

LOC101881770
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881770
product: rhomboid domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031053777.2
SIO_010081: LOC101881770
subclass of: SO_0000673
so part of: LOC101881770
location: complement(join(1055849..1056708,1058782..1058932,1059285..1059686,1059783..1060211))
location: region:1055849-1060211:-1
so has part: feature:1059783-1060211:-1:exon
so has part: feature:1059285-1059686:-1:exon
so has part: feature:1058782-1058932:-1:exon
so has part: feature:1055849-1056708:-1:exon

position:1060211:-1
position: 1060211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059783-1060211:-1:exon

position:1059783:-1
position: 1059783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059285-1059686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1058782-1058932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1055849-1056708:-1:exon

LOC101881770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhomboid domain-containing protein 2 isoform X3
translation: MAAPWAPVPAAAALTLLLSVCASVPGLLWAAPGARSAAALRPAALRAGEVYRLITYIFVYEDLISLTCGAIIIWYFAGSFEKNVGTVKHCFLTITFAVVSALLYLLLEPIVSMVSEVEDAKGFMPVAFATLGVSTTRSRMKRTLFLGVRVPVVLVPWTMLCIAWFIPHSSLLSNLCGLLAGEAYGLGCCFCLDFPESVGSKLDQVFPFSLLKRIPGLKYIPGSSAERRAFESSKVNPSPGTYPTQSYYCTSPLAFPAFQMQHPSVQSQGFQHSCAPGYGEGSQHSHTAGHSLMSSSYQARGAFGGCYVQSHTGASPGQCCQFSPSPQTLAGLVPPAGVQQALGYPAPMGAPVPAELSGVQVY
SIO_010081: LOC101881770
subclass of: SO_0000673
so part of: LOC101881770
location: complement(join(1056321..1056708,1058782..1058932,1059285..1059686,1060680..1060827))
location: region:1056321-1060827:-1
so has part: feature:1060680-1060827:-1:exon
so has part: feature:1059285-1059686:-1:exon
so has part: feature:1058782-1058932:-1:exon
so has part: feature:1056321-1056708:-1:exon

XP_033924964.1
type: Protein
SIO_000068: ncbiprotein

position:1056321:-1
position: 1056321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060827:-1
position: 1060827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060680-1060827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059285-1059686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1058782-1058932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1056321-1056708:-1:exon

LOC101881770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhomboid domain-containing protein 2 isoform X2
translation: MKAINPFYRLITYIFVYEDLISLTCGAIIIWYFAGSFEKNVGTVKHCFLTITFAVVSALLYLLLEPIVSMVSEVEDAKGFMPVAFATLGVSTTRSRMKRTLFLGVRVPVVLVPWTMLCIAWFIPHSSLLSNLCGLLAGEAYGLGCCFCLDFPESVGSKLDQVFPFSLLKRIPGLKYIPGSSAERRAFESSKVNPSPGTYPTQSYYCTSPLAFPAFQMQHPSVQSQGFQHSCAPGYGEGSQHSHTAGHSLMSSSYQARGAFGGCYVQSHTGASPGQCCQFSPSPQTLAGLVPPAGVQQALGYPAPMGAPVPAELSGVQVY
SIO_010081: LOC101881770
subclass of: SO_0000673
so part of: LOC101881770
location: complement(join(1056321..1056708,1058782..1058932,1059285..1059686,1059783..1059801))
location: region:1056321-1059801:-1
so has part: feature:1059783-1059801:-1:exon
so has part: feature:1059285-1059686:-1:exon
so has part: feature:1058782-1058932:-1:exon
so has part: feature:1056321-1056708:-1:exon

XP_030909637.2
type: Protein
SIO_000068: ncbiprotein

position:1059801:-1
position: 1059801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059783-1059801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059285-1059686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1058782-1058932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1056321-1056708:-1:exon

LOC101881770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhomboid domain-containing protein 2 isoform X1
translation: MKAINPCRLTLPLARAWHCSACKQMHCCLCLSKVLVCSVYRLITYIFVYEDLISLTCGAIIIWYFAGSFEKNVGTVKHCFLTITFAVVSALLYLLLEPIVSMVSEVEDAKGFMPVAFATLGVSTTRSRMKRTLFLGVRVPVVLVPWTMLCIAWFIPHSSLLSNLCGLLAGEAYGLGCCFCLDFPESVGSKLDQVFPFSLLKRIPGLKYIPGSSAERRAFESSKVNPSPGTYPTQSYYCTSPLAFPAFQMQHPSVQSQGFQHSCAPGYGEGSQHSHTAGHSLMSSSYQARGAFGGCYVQSHTGASPGQCCQFSPSPQTLAGLVPPAGVQQALGYPAPMGAPVPAELSGVQVY
SIO_010081: LOC101881770
subclass of: SO_0000673
so part of: LOC101881770
location: complement(join(1056321..1056708,1058782..1058932,1059285..1059801))
location: region:1056321-1059801:-1
so has part: feature:1059285-1059801:-1:exon
so has part: feature:1058782-1058932:-1:exon
so has part: feature:1056321-1056708:-1:exon

XP_033924963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1059285-1059801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058782-1058932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1056321-1056708:-1:exon

LOC101881937
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101881937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1063136..1083543
location: region:1063136-1083543:1
so has part: feature:1063136-1083543:1:exon
subclass of: SO_0000010

101881937
type: Gene
SIO_000068: ncbigene

position:1063136:1
position: 1063136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083543:1
position: 1083543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063136-1083543:1:exon

LOC101881937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101881937
product: TATA-box binding protein associated factor 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068740.1
SIO_010081: LOC101881937
subclass of: SO_0000673
so part of: LOC101881937
location: join(1063136..1063258,1066769..1066805,1067920..1067968,1068161..1068251,1068330..1068447,1071065..1071348,1072152..1072266,1078930..1078964,1079587..1079619,1080221..1080330,1080858..1080987,1081426..1081515,1082359..1082443,1082534..1082619,1082724..1082826,1083159..1083543)
location: region:1063136-1083543:1
so has part: feature:1063136-1063258:1:exon
so has part: feature:1066769-1066805:1:exon
so has part: feature:1067920-1067968:1:exon
so has part: feature:1068161-1068251:1:exon
so has part: feature:1068330-1068447:1:exon
so has part: feature:1071065-1071348:1:exon
so has part: feature:1072152-1072266:1:exon
so has part: feature:1078930-1078964:1:exon
so has part: feature:1079587-1079619:1:exon
so has part: feature:1080221-1080330:1:exon
so has part: feature:1080858-1080987:1:exon
so has part: feature:1081426-1081515:1:exon
so has part: feature:1082359-1082443:1:exon
so has part: feature:1082534-1082619:1:exon
so has part: feature:1082724-1082826:1:exon
so has part: feature:1083159-1083543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063136-1063258:1:exon

position:1063258:1
position: 1063258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1066769-1066805:1:exon

position:1066769:1
position: 1066769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066805:1
position: 1066805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1067920-1067968:1:exon

position:1067920:1
position: 1067920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067968:1
position: 1067968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1068161-1068251:1:exon

position:1068161:1
position: 1068161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068251:1
position: 1068251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1068330-1068447:1:exon

position:1068330:1
position: 1068330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068447:1
position: 1068447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1071065-1071348:1:exon

position:1071065:1
position: 1071065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071348:1
position: 1071348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1072152-1072266:1:exon

position:1072152:1
position: 1072152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072266:1
position: 1072266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1078930-1078964:1:exon

position:1078930:1
position: 1078930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078964:1
position: 1078964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1079587-1079619:1:exon

position:1079587:1
position: 1079587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079619:1
position: 1079619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1080221-1080330:1:exon

position:1080221:1
position: 1080221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080330:1
position: 1080330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1080858-1080987:1:exon

position:1080858:1
position: 1080858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080987:1
position: 1080987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1081426-1081515:1:exon

position:1081426:1
position: 1081426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081515:1
position: 1081515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1082359-1082443:1:exon

position:1082359:1
position: 1082359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082443:1
position: 1082443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1082534-1082619:1:exon

position:1082534:1
position: 1082534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082619:1
position: 1082619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1082724-1082826:1:exon

position:1082724:1
position: 1082724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082826:1
position: 1082826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1083159-1083543:1:exon

position:1083159:1
position: 1083159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101881937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101881937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TATA-binding protein-associated factor 2N
translation: MASDSGSYSQSGGQQSYSSYGNQSSQNYGQAQGYSGYGQSGDNSSYGQNYGSYHGNYGQNQTGYGQDSQGYDDESGYENQNQSSYNQQSYGSQGQQKGSSRGGRGSYEQKSNYGQHQSSYDQQSSYGQNQDSYDQQSSSYDQQSGYGHQGSYDQQSGYGHQSSYDQKSGYNQHQSSYGHSQQSYQSQKGSYSHNSQDDRREKSRYGEDNRGYGGSQGGGRGGYDMDGRGHMSGYSGGDRGGFKNYGGQRDYGPRSDADSESDNSDNNTIFVQGLGEDVSTDQVADYFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFNGNVIKVSFATRRPEFMRGGGGGGRRGSRGGYGRGGGFQGRSGEPKNGDWVCPNPGCGNMNFARRNSCNQCGEPRPEDSRPSGDFRGRGGYGGERGYRGRGGRGGDRGGGYGGKMGGRNDFRNDQRNRPY
SIO_010081: LOC101881937
subclass of: SO_0000673
so part of: LOC101881937
location: join(1063249..1063258,1066769..1066805,1067920..1067968,1068161..1068251,1068330..1068447,1071065..1071348,1072152..1072266,1078930..1078964,1079587..1079619,1080221..1080330,1080858..1080987,1081426..1081515,1082359..1082443,1082534..1082619,1082724..1082826,1083159..1083198)
location: region:1063249-1083198:1
so has part: feature:1063249-1063258:1:exon
so has part: feature:1066769-1066805:1:exon
so has part: feature:1067920-1067968:1:exon
so has part: feature:1068161-1068251:1:exon
so has part: feature:1068330-1068447:1:exon
so has part: feature:1071065-1071348:1:exon
so has part: feature:1072152-1072266:1:exon
so has part: feature:1078930-1078964:1:exon
so has part: feature:1079587-1079619:1:exon
so has part: feature:1080221-1080330:1:exon
so has part: feature:1080858-1080987:1:exon
so has part: feature:1081426-1081515:1:exon
so has part: feature:1082359-1082443:1:exon
so has part: feature:1082534-1082619:1:exon
so has part: feature:1082724-1082826:1:exon
so has part: feature:1083159-1083198:1:exon

XP_033924631.1
type: Protein
SIO_000068: ncbiprotein

position:1063249:1
position: 1063249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083198:1
position: 1083198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063249-1063258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1066769-1066805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067920-1067968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1068161-1068251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068330-1068447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071065-1071348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1072152-1072266:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1078930-1078964:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1079587-1079619:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1080221-1080330:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1080858-1080987:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1081426-1081515:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1082359-1082443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1082534-1082619:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1082724-1082826:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1083159-1083198:1:exon

LOC106023431
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC106023431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1089626..1103081
location: region:1089626-1103081:1
so has part: feature:1089626-1103081:1:exon
subclass of: SO_0000010

106023431
type: Gene
SIO_000068: ncbigene

position:1089626:1
position: 1089626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103081:1
position: 1103081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089626-1103081:1:exon

LOC106023431
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC106023431
product: matrix metallopeptidase 28
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034068888.1
SIO_010081: LOC106023431
subclass of: SO_0000673
so part of: LOC106023431
location: join(1089626..1089743,1096034..1096113,1096659..1096819,1099315..1099536,1100060..1100305,1100689..1100838,1101300..1101467,1102236..1103081)
location: region:1089626-1103081:1
so has part: feature:1089626-1089743:1:exon
so has part: feature:1096034-1096113:1:exon
so has part: feature:1096659-1096819:1:exon
so has part: feature:1099315-1099536:1:exon
so has part: feature:1100060-1100305:1:exon
so has part: feature:1100689-1100838:1:exon
so has part: feature:1101300-1101467:1:exon
so has part: feature:1102236-1103081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089626-1089743:1:exon

position:1089743:1
position: 1089743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1096034-1096113:1:exon

position:1096034:1
position: 1096034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096113:1
position: 1096113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1096659-1096819:1:exon

position:1096659:1
position: 1096659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096819:1
position: 1096819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1099315-1099536:1:exon

position:1099315:1
position: 1099315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099536:1
position: 1099536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1100060-1100305:1:exon

position:1100060:1
position: 1100060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100305:1
position: 1100305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1100689-1100838:1:exon

position:1100689:1
position: 1100689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100838:1
position: 1100838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1101300-1101467:1:exon

position:1101300:1
position: 1101300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101467:1
position: 1101467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1102236-1103081:1:exon

position:1102236:1
position: 1102236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC106023431
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC106023431
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: matrix metalloproteinase-28
translation: MGPRAAGALRAALALGLLAAAQPGPAPRQRRDAELFLEKYGYFGKQAPGTHSPDEFTDALRDFQRVTHLPLSGVLDAPTLHQMALPRCGTGDGERDTGTQQASSTRRHRRTAQHGGRWYKRHLTYRVVNWPQYLPQHKVRLAVRAAFELWSNVSSLVFWEVRDGPADIRLTFFHGDHNDGLNNAFDGPGGALAHAFFPRRGEAHFDSAERWSLHSGKGRNLFIVVAHEVGHTLGLQHSPVRRALMSPYYKKLGKDFVLSWDDVLAVQSLYGKPSKGLAIQLPGKVFTHFQDWSTDPYGGDRQQRSPSAYYCHSFFDAITADGDHNIYIFKGNHYWMVPVHGNASDPQPLQTRWPGLPAGIDASAWSQSTGKFYFFKGGRCWRYMGSRLDAGFPTKCSARGLPRHPDTALHFQQLRRMVLFKGPKYYVLGEEPLALEPYYPRSLRDWQGLPSGTAGALTHSDGSVYFFRDERYWCFQPGQLRVVASGKWAAELPWMGCWDGNSGHVLF
SIO_010081: LOC106023431
subclass of: SO_0000673
so part of: LOC106023431
location: join(1089642..1089743,1096034..1096113,1096659..1096819,1099315..1099536,1100060..1100305,1100689..1100838,1101300..1101467,1102236..1102631)
location: region:1089642-1102631:1
so has part: feature:1089642-1089743:1:exon
so has part: feature:1096034-1096113:1:exon
so has part: feature:1096659-1096819:1:exon
so has part: feature:1099315-1099536:1:exon
so has part: feature:1100060-1100305:1:exon
so has part: feature:1100689-1100838:1:exon
so has part: feature:1101300-1101467:1:exon
so has part: feature:1102236-1102631:1:exon

XP_033924779.1
type: Protein
SIO_000068: ncbiprotein

position:1089642:1
position: 1089642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102631:1
position: 1102631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089642-1089743:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1096034-1096113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096659-1096819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1099315-1099536:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100060-1100305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1100689-1100838:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1101300-1101467:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1102236-1102631:1:exon

LOC101867941
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101867941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1105726..1109126
location: region:1105726-1109126:1
so has part: feature:1105726-1109126:1:exon
subclass of: SO_0000010

101867941
type: Gene
SIO_000068: ncbigene

position:1105726:1
position: 1105726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109126:1
position: 1109126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105726-1109126:1:exon

LOC101867941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101867941
product: GAS2-like protein 2A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068920.1
SIO_010081: LOC101867941
subclass of: SO_0000673
so part of: LOC101867941
location: join(1105726..1106085,1106670..1106903,1107366..1107473,1108013..1108109,1108383..1108636,1108811..1109126)
location: region:1105726-1109126:1
so has part: feature:1105726-1106085:1:exon
so has part: feature:1106670-1106903:1:exon
so has part: feature:1107366-1107473:1:exon
so has part: feature:1108013-1108109:1:exon
so has part: feature:1108383-1108636:1:exon
so has part: feature:1108811-1109126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1105726-1106085:1:exon

position:1106085:1
position: 1106085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1106670-1106903:1:exon

position:1106670:1
position: 1106670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106903:1
position: 1106903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1107366-1107473:1:exon

position:1107366:1
position: 1107366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107473:1
position: 1107473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1108013-1108109:1:exon

position:1108013:1
position: 1108013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108109:1
position: 1108109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1108383-1108636:1:exon

position:1108383:1
position: 1108383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108636:1
position: 1108636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1108811-1109126:1:exon

position:1108811:1
position: 1108811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101867941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101867941
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: GAS2-like protein 2A
translation: MWGPPCPAVRSIRPYRSSEQYLYAMKEDLAEWLKELYELDIEVSTFVEVLETGSVLCSHANNITHVAEEFSRACPSAAQHLHLPAAGVACNLAAQPGTFQARDNVSNFIQWCRKEMDIKDVLMFETEDLVLRKNEKNFVLCLLELARRAARFGVRAPTLVQMEQEIEEELRQEMELPPAGTPRPXPRKTQHLHNLDQMVQHLVSRCTCPVQFPMIKISEGKYRVGDSDTLIFVRILREHVMVRVGGGWDTLEHYLDKHDPCRCTSLSHKQALKSRSLQQQVQHEIRLCPAPKGRGQPQPTVLVSRSQSPLPPVTWGSRVPPGLNPPSPEGSGHPVGASARREQPQRVPFGQDTRAISSPFGTATAPIQVTRSPQLCLQAAQQGTPPFPCTPQHTGRRGGGPGHRMGAPQ
SIO_010081: LOC101867941
subclass of: SO_0000673
so part of: LOC101867941
location: join(1105728..1106085,1106670..1106903,1107366..1107473,1108013..1108109,1108383..1108636,1108811..1108987)
location: region:1105728-1108987:1
so has part: feature:1105728-1106085:1:exon
so has part: feature:1106670-1106903:1:exon
so has part: feature:1107366-1107473:1:exon
so has part: feature:1108013-1108109:1:exon
so has part: feature:1108383-1108636:1:exon
so has part: feature:1108811-1108987:1:exon

XP_033924811.1
type: Protein
SIO_000068: ncbiprotein

position:1105728:1
position: 1105728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108987:1
position: 1108987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105728-1106085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106670-1106903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107366-1107473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1108013-1108109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1108383-1108636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1108811-1108987:1:exon

LOC101868110
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1112775..1118071)
location: region:1112775-1118071:-1
so has part: feature:1112775-1118071:-1:exon
subclass of: SO_0000010

101868110
type: Gene
SIO_000068: ncbigene

position:1112775:-1
position: 1112775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118071:-1
position: 1118071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112775-1118071:-1:exon

LOC101868110
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868110
product: RAS like family 10 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034068934.1
SIO_010081: LOC101868110
subclass of: SO_0000673
so part of: LOC101868110
location: complement(join(1112775..1113298,1113719..1113843,1115947..1116257,1118047..1118071))
location: region:1112775-1118071:-1
so has part: feature:1118047-1118071:-1:exon
so has part: feature:1115947-1116257:-1:exon
so has part: feature:1113719-1113843:-1:exon
so has part: feature:1112775-1113298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1118047-1118071:-1:exon

position:1118047:-1
position: 1118047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1115947-1116257:-1:exon

position:1115947:-1
position: 1115947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116257:-1
position: 1116257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1113719-1113843:-1:exon

position:1113719:-1
position: 1113719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113843:-1
position: 1113843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1112775-1113298:-1:exon

position:1113298:-1
position: 1113298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101868110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-like protein family member 10B
translation: MVATVKIAVLGAQGVGKSAIVRQFLYNEFSEVCAPTTARRVYLPAVVMNGHVHDLQIMDFPPITAFPVNTLQEWADVCCRGLRSVHAYILVYDICCFDSFEYIKTIRQQILETRVIGTSETPIIIVGNKRDLQRGRVIPRWNVSNLVKKTWKCGYIECSAKYNWHILLLFSELLKSVGCARCKHVHTTIRFQGALRRNRCTIM
SIO_010081: LOC101868110
subclass of: SO_0000673
so part of: LOC101868110
location: complement(join(1113028..1113298,1113719..1113843,1115947..1116162))
location: region:1113028-1116162:-1
so has part: feature:1115947-1116162:-1:exon
so has part: feature:1113719-1113843:-1:exon
so has part: feature:1113028-1113298:-1:exon

XP_033924825.1
type: Protein
SIO_000068: ncbiprotein

position:1113028:-1
position: 1113028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116162:-1
position: 1116162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115947-1116162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1113719-1113843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1113028-1113298:-1:exon

LOC101868051
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1120731..1193627)
location: region:1120731-1193627:-1
so has part: feature:1120731-1193627:-1:exon
subclass of: SO_0000010

101868051
type: Gene
SIO_000068: ncbigene

position:1120731:-1
position: 1120731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193627:-1
position: 1193627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120731-1193627:-1:exon

LOC101868051
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868051
product: adaptor related protein complex 2 subunit beta 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068689.1
SIO_010081: LOC101868051
subclass of: SO_0000673
so part of: LOC101868051
location: complement(join(1120731..1122869,1123865..1124019,1131930..1132016,1132724..1132808,1140949..1141078,1143571..1143716,1144980..1145126,1147255..1147296,1156413..1156605,1160529..1160788,1163949..1164047,1164226..1164391,1165483..1165598,1169830..1169925,1172005..1172125,1173027..1173248,1175342..1175532,1184499..1184744,1185594..1185729,1187729..1187834,1189841..1189898,1193502..1193627))
location: region:1120731-1193627:-1
so has part: feature:1193502-1193627:-1:exon
so has part: feature:1189841-1189898:-1:exon
so has part: feature:1187729-1187834:-1:exon
so has part: feature:1185594-1185729:-1:exon
so has part: feature:1184499-1184744:-1:exon
so has part: feature:1175342-1175532:-1:exon
so has part: feature:1173027-1173248:-1:exon
so has part: feature:1172005-1172125:-1:exon
so has part: feature:1169830-1169925:-1:exon
so has part: feature:1165483-1165598:-1:exon
so has part: feature:1164226-1164391:-1:exon
so has part: feature:1163949-1164047:-1:exon
so has part: feature:1160529-1160788:-1:exon
so has part: feature:1156413-1156605:-1:exon
so has part: feature:1147255-1147296:-1:exon
so has part: feature:1144980-1145126:-1:exon
so has part: feature:1143571-1143716:-1:exon
so has part: feature:1140949-1141078:-1:exon
so has part: feature:1132724-1132808:-1:exon
so has part: feature:1131930-1132016:-1:exon
so has part: feature:1123865-1124019:-1:exon
so has part: feature:1120731-1122869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1193502-1193627:-1:exon

position:1193502:-1
position: 1193502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1189841-1189898:-1:exon

position:1189841:-1
position: 1189841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189898:-1
position: 1189898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1187729-1187834:-1:exon

position:1187729:-1
position: 1187729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187834:-1
position: 1187834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1185594-1185729:-1:exon

position:1185594:-1
position: 1185594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185729:-1
position: 1185729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1184499-1184744:-1:exon

position:1184499:-1
position: 1184499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184744:-1
position: 1184744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1175342-1175532:-1:exon

position:1175342:-1
position: 1175342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175532:-1
position: 1175532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1173027-1173248:-1:exon

position:1173027:-1
position: 1173027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173248:-1
position: 1173248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1172005-1172125:-1:exon

position:1172005:-1
position: 1172005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172125:-1
position: 1172125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1169830-1169925:-1:exon

position:1169830:-1
position: 1169830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169925:-1
position: 1169925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1165483-1165598:-1:exon

position:1165483:-1
position: 1165483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165598:-1
position: 1165598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1164226-1164391:-1:exon

position:1164226:-1
position: 1164226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164391:-1
position: 1164391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1163949-1164047:-1:exon

position:1163949:-1
position: 1163949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164047:-1
position: 1164047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1160529-1160788:-1:exon

position:1160529:-1
position: 1160529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160788:-1
position: 1160788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1156413-1156605:-1:exon

position:1156413:-1
position: 1156413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156605:-1
position: 1156605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1147255-1147296:-1:exon

position:1147255:-1
position: 1147255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147296:-1
position: 1147296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1144980-1145126:-1:exon

position:1144980:-1
position: 1144980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145126:-1
position: 1145126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1143571-1143716:-1:exon

position:1143571:-1
position: 1143571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143716:-1
position: 1143716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1140949-1141078:-1:exon

position:1140949:-1
position: 1140949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141078:-1
position: 1141078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1132724-1132808:-1:exon

position:1132724:-1
position: 1132724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132808:-1
position: 1132808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1131930-1132016:-1:exon

position:1131930:-1
position: 1131930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132016:-1
position: 1132016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1123865-1124019:-1:exon

position:1123865:-1
position: 1123865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124019:-1
position: 1124019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1120731-1122869:-1:exon

position:1122869:-1
position: 1122869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101868051
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868051
product: adaptor related protein complex 2 subunit beta 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068691.1
SIO_010081: LOC101868051
subclass of: SO_0000673
so part of: LOC101868051
location: complement(join(1122525..1122869,1123865..1124019,1131930..1132016,1132724..1132808,1140949..1141078,1143571..1143716,1144980..1145126,1156413..1156605,1160529..1160788,1163949..1164047,1164226..1164391,1165483..1165598,1169830..1169925,1172005..1172125,1173027..1173248,1175342..1175532,1184499..1184744,1185594..1185729,1187729..1187834,1189841..1189898,1193502..1193626))
location: region:1122525-1193626:-1
so has part: feature:1193502-1193626:-1:exon
so has part: feature:1189841-1189898:-1:exon
so has part: feature:1187729-1187834:-1:exon
so has part: feature:1185594-1185729:-1:exon
so has part: feature:1184499-1184744:-1:exon
so has part: feature:1175342-1175532:-1:exon
so has part: feature:1173027-1173248:-1:exon
so has part: feature:1172005-1172125:-1:exon
so has part: feature:1169830-1169925:-1:exon
so has part: feature:1165483-1165598:-1:exon
so has part: feature:1164226-1164391:-1:exon
so has part: feature:1163949-1164047:-1:exon
so has part: feature:1160529-1160788:-1:exon
so has part: feature:1156413-1156605:-1:exon
so has part: feature:1144980-1145126:-1:exon
so has part: feature:1143571-1143716:-1:exon
so has part: feature:1140949-1141078:-1:exon
so has part: feature:1132724-1132808:-1:exon
so has part: feature:1131930-1132016:-1:exon
so has part: feature:1123865-1124019:-1:exon
so has part: feature:1122525-1122869:-1:exon

position:1122525:-1
position: 1122525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193626:-1
position: 1193626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193502-1193626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189841-1189898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187729-1187834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1185594-1185729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184499-1184744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1175342-1175532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1173027-1173248:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1172005-1172125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1169830-1169925:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1165483-1165598:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1164226-1164391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1163949-1164047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1160529-1160788:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1156413-1156605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1144980-1145126:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1143571-1143716:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1140949-1141078:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1132724-1132808:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1131930-1132016:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1123865-1124019:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1122525-1122869:-1:exon

LOC101868051
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868051
product: adaptor related protein complex 2 subunit beta 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034068690.1
SIO_010081: LOC101868051
subclass of: SO_0000673
so part of: LOC101868051
location: complement(join(1122525..1122869,1123865..1124019,1131930..1132016,1132724..1132808,1140949..1141078,1143571..1143716,1144980..1145126,1147255..1147296,1156413..1156605,1160529..1160788,1163949..1164047,1164226..1164391,1165483..1165598,1169830..1169925,1172005..1172125,1173027..1173248,1175342..1175532,1184499..1184744,1185594..1185729,1187729..1187834,1189841..1189898,1193458..1193476))
location: region:1122525-1193476:-1
so has part: feature:1193458-1193476:-1:exon
so has part: feature:1189841-1189898:-1:exon
so has part: feature:1187729-1187834:-1:exon
so has part: feature:1185594-1185729:-1:exon
so has part: feature:1184499-1184744:-1:exon
so has part: feature:1175342-1175532:-1:exon
so has part: feature:1173027-1173248:-1:exon
so has part: feature:1172005-1172125:-1:exon
so has part: feature:1169830-1169925:-1:exon
so has part: feature:1165483-1165598:-1:exon
so has part: feature:1164226-1164391:-1:exon
so has part: feature:1163949-1164047:-1:exon
so has part: feature:1160529-1160788:-1:exon
so has part: feature:1156413-1156605:-1:exon
so has part: feature:1147255-1147296:-1:exon
so has part: feature:1144980-1145126:-1:exon
so has part: feature:1143571-1143716:-1:exon
so has part: feature:1140949-1141078:-1:exon
so has part: feature:1132724-1132808:-1:exon
so has part: feature:1131930-1132016:-1:exon
so has part: feature:1123865-1124019:-1:exon
so has part: feature:1122525-1122869:-1:exon

position:1193476:-1
position: 1193476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193458-1193476:-1:exon

position:1193458:-1
position: 1193458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1189841-1189898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187729-1187834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1185594-1185729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184499-1184744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1175342-1175532:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1173027-1173248:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1172005-1172125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1169830-1169925:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1165483-1165598:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1164226-1164391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1163949-1164047:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1160529-1160788:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1156413-1156605:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1147255-1147296:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1144980-1145126:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1143571-1143716:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1140949-1141078:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1132724-1132808:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1131930-1132016:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1123865-1124019:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1122525-1122869:-1:exon

LOC101868051
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-2 complex subunit beta isoform X2
translation: MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTATTNLEQPQVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGGLDSLVGQTYIPSSVPATFAPSPTPAVVSSGLNDLFELSSGIGMAPGGYVAPKSVWLPAVKAKGLEISGTFSHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKDCHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQAYDAILKN
SIO_010081: LOC101868051
subclass of: SO_0000673
so part of: LOC101868051
location: complement(join(1122795..1122869,1123865..1124019,1131930..1132016,1132724..1132808,1140949..1141078,1143571..1143716,1144980..1145126,1156413..1156605,1160529..1160788,1163949..1164047,1164226..1164391,1165483..1165598,1169830..1169925,1172005..1172125,1173027..1173248,1175342..1175532,1184499..1184744,1185594..1185729,1187729..1187834,1189841..1189877))
location: region:1122795-1189877:-1
so has part: feature:1189841-1189877:-1:exon
so has part: feature:1187729-1187834:-1:exon
so has part: feature:1185594-1185729:-1:exon
so has part: feature:1184499-1184744:-1:exon
so has part: feature:1175342-1175532:-1:exon
so has part: feature:1173027-1173248:-1:exon
so has part: feature:1172005-1172125:-1:exon
so has part: feature:1169830-1169925:-1:exon
so has part: feature:1165483-1165598:-1:exon
so has part: feature:1164226-1164391:-1:exon
so has part: feature:1163949-1164047:-1:exon
so has part: feature:1160529-1160788:-1:exon
so has part: feature:1156413-1156605:-1:exon
so has part: feature:1144980-1145126:-1:exon
so has part: feature:1143571-1143716:-1:exon
so has part: feature:1140949-1141078:-1:exon
so has part: feature:1132724-1132808:-1:exon
so has part: feature:1131930-1132016:-1:exon
so has part: feature:1123865-1124019:-1:exon
so has part: feature:1122795-1122869:-1:exon

XP_033924582.1
type: Protein
SIO_000068: ncbiprotein

position:1122795:-1
position: 1122795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189877:-1
position: 1189877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1189841-1189877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187729-1187834:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185594-1185729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184499-1184744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1175342-1175532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1173027-1173248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172005-1172125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1169830-1169925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1165483-1165598:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1164226-1164391:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1163949-1164047:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1160529-1160788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1156413-1156605:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1144980-1145126:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1143571-1143716:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1140949-1141078:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1132724-1132808:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1131930-1132016:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1123865-1124019:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1122795-1122869:-1:exon

LOC101868051
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-2 complex subunit beta isoform X1
translation: MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTATTNLEQPQVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGGLDSLLGSDLGGGIGGSPAVGQTYIPSSVPATFAPSPTPAVVSSGLNDLFELSSGIGMAPGGYVAPKSVWLPAVKAKGLEISGTFSHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKDCHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQAYDAILKN
SIO_010081: LOC101868051
subclass of: SO_0000673
so part of: LOC101868051
location: complement(join(1122795..1122869,1123865..1124019,1131930..1132016,1132724..1132808,1140949..1141078,1143571..1143716,1144980..1145126,1147255..1147296,1156413..1156605,1160529..1160788,1163949..1164047,1164226..1164391,1165483..1165598,1169830..1169925,1172005..1172125,1173027..1173248,1175342..1175532,1184499..1184744,1185594..1185729,1187729..1187834,1189841..1189877))
location: region:1122795-1189877:-1
so has part: feature:1189841-1189877:-1:exon
so has part: feature:1187729-1187834:-1:exon
so has part: feature:1185594-1185729:-1:exon
so has part: feature:1184499-1184744:-1:exon
so has part: feature:1175342-1175532:-1:exon
so has part: feature:1173027-1173248:-1:exon
so has part: feature:1172005-1172125:-1:exon
so has part: feature:1169830-1169925:-1:exon
so has part: feature:1165483-1165598:-1:exon
so has part: feature:1164226-1164391:-1:exon
so has part: feature:1163949-1164047:-1:exon
so has part: feature:1160529-1160788:-1:exon
so has part: feature:1156413-1156605:-1:exon
so has part: feature:1147255-1147296:-1:exon
so has part: feature:1144980-1145126:-1:exon
so has part: feature:1143571-1143716:-1:exon
so has part: feature:1140949-1141078:-1:exon
so has part: feature:1132724-1132808:-1:exon
so has part: feature:1131930-1132016:-1:exon
so has part: feature:1123865-1124019:-1:exon
so has part: feature:1122795-1122869:-1:exon

XP_033924580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1189841-1189877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187729-1187834:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185594-1185729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184499-1184744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1175342-1175532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1173027-1173248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172005-1172125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1169830-1169925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1165483-1165598:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1164226-1164391:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1163949-1164047:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1160529-1160788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1156413-1156605:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1147255-1147296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1144980-1145126:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1143571-1143716:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1140949-1141078:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1132724-1132808:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1131930-1132016:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1123865-1124019:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1122795-1122869:-1:exon

LOC101868051
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-2 complex subunit beta isoform X1
translation: MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTATTNLEQPQVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDLLGGGLDSLLGSDLGGGIGGSPAVGQTYIPSSVPATFAPSPTPAVVSSGLNDLFELSSGIGMAPGGYVAPKSVWLPAVKAKGLEISGTFSHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKDCHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQAYDAILKN
SIO_010081: LOC101868051
subclass of: SO_0000673
so part of: LOC101868051
location: complement(join(1122795..1122869,1123865..1124019,1131930..1132016,1132724..1132808,1140949..1141078,1143571..1143716,1144980..1145126,1147255..1147296,1156413..1156605,1160529..1160788,1163949..1164047,1164226..1164391,1165483..1165598,1169830..1169925,1172005..1172125,1173027..1173248,1175342..1175532,1184499..1184744,1185594..1185729,1187729..1187834,1189841..1189877))
location: region:1122795-1189877:-1
so has part: feature:1189841-1189877:-1:exon
so has part: feature:1187729-1187834:-1:exon
so has part: feature:1185594-1185729:-1:exon
so has part: feature:1184499-1184744:-1:exon
so has part: feature:1175342-1175532:-1:exon
so has part: feature:1173027-1173248:-1:exon
so has part: feature:1172005-1172125:-1:exon
so has part: feature:1169830-1169925:-1:exon
so has part: feature:1165483-1165598:-1:exon
so has part: feature:1164226-1164391:-1:exon
so has part: feature:1163949-1164047:-1:exon
so has part: feature:1160529-1160788:-1:exon
so has part: feature:1156413-1156605:-1:exon
so has part: feature:1147255-1147296:-1:exon
so has part: feature:1144980-1145126:-1:exon
so has part: feature:1143571-1143716:-1:exon
so has part: feature:1140949-1141078:-1:exon
so has part: feature:1132724-1132808:-1:exon
so has part: feature:1131930-1132016:-1:exon
so has part: feature:1123865-1124019:-1:exon
so has part: feature:1122795-1122869:-1:exon

XP_033924581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1189841-1189877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187729-1187834:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185594-1185729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184499-1184744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1175342-1175532:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1173027-1173248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172005-1172125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1169830-1169925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1165483-1165598:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1164226-1164391:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1163949-1164047:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1160529-1160788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1156413-1156605:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1147255-1147296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1144980-1145126:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1143571-1143716:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1140949-1141078:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1132724-1132808:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1131930-1132016:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1123865-1124019:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1122795-1122869:-1:exon

LOC101868276
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1193756..1196906
location: region:1193756-1196906:1
so has part: feature:1193756-1196906:1:exon
subclass of: SO_0000010

101868276
type: Gene
SIO_000068: ncbigene

position:1193756:1
position: 1193756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196906:1
position: 1196906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193756-1196906:1:exon

LOC101868276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868276
product: peroxisomal biogenesis factor 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034068898.1
SIO_010081: LOC101868276
subclass of: SO_0000673
so part of: LOC101868276
location: join(1193756..1193895,1194502..1195046,1195771..1196906)
location: region:1193756-1196906:1
so has part: feature:1193756-1193895:1:exon
so has part: feature:1194502-1195046:1:exon
so has part: feature:1195771-1196906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1193756-1193895:1:exon

position:1193895:1
position: 1193895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1194502-1195046:1:exon

position:1194502:1
position: 1194502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195046:1
position: 1195046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1195771-1196906:1:exon

position:1195771:1
position: 1195771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome assembly protein 12
translation: MAELGAHLTAASAGDDRPSIFEAVAQDSLMAAVKPALQHLVKVLAESNPGRYGFLWHWFDEIYVLLDVLLQQHYLARCSASFSENFYSLKRIPIGDCKQQPLATAGLPKRQHWKSLLLLVLVPYLKGKLEKLVSTLREEDEYSIHPPSSSWKRFYRAFLAAYPFVNMTWEGWFLTQQLCYILGKAQHHSPMLRLAGVRLVRLTAEDILALEKKLGGATSYPTPSIKTQVQSAVRKALGTIAFSLSTGLSISVFFLQFLDWWYSSENQETIKSLTALPTPPPPVHLDSSSTLLPKLKTVCPLCHKTRVNATALSTSGFVFCYRCAYGYVKAHQCCPITGYATELQHLVKLYSPES
SIO_010081: LOC101868276
subclass of: SO_0000673
so part of: LOC101868276
location: join(1193770..1193895,1194502..1195046,1195771..1196164)
location: region:1193770-1196164:1
so has part: feature:1193770-1193895:1:exon
so has part: feature:1194502-1195046:1:exon
so has part: feature:1195771-1196164:1:exon

XP_033924789.1
type: Protein
SIO_000068: ncbiprotein

position:1193770:1
position: 1193770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196164:1
position: 1196164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193770-1193895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1194502-1195046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195771-1196164:1:exon

LOC115947348
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115947348
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1197839..1197936)
location: region:1197839-1197936:-1
so has part: feature:1197839-1197936:-1:exon
subclass of: SO_0000578

115947348
type: Gene
SIO_000068: ncbigene

position:1197839:-1
position: 1197839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197936:-1
position: 1197936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197839-1197936:-1:exon

LOC115947348
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: snoRNA
gene: LOC115947348
product: Z30 small nucleolar RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00288
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004081280.1
SIO_010081: LOC115947348
subclass of: SO_0000673
so part of: LOC115947348
location: complement(1197839..1197936)
location: region:1197839-1197936:-1
so has part: feature:1197839-1197936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1197839-1197936:-1:exon

LOC117436889
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC117436889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1198940..1212522
location: region:1198940-1212522:1
so has part: feature:1198940-1212522:1:exon
subclass of: SO_0000011

117436889
type: Gene
SIO_000068: ncbigene

position:1198940:1
position: 1198940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212522:1
position: 1212522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198940-1212522:1:exon

LOC117436889
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC117436889
product: uncharacterized LOC117436889
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004550218.1
SIO_010081: LOC117436889
subclass of: SO_0000673
so part of: LOC117436889
location: join(1198940..1199396,1209695..1209800,1212296..1212522)
location: region:1198940-1212522:1
so has part: feature:1198940-1199396:1:exon
so has part: feature:1209695-1209800:1:exon
so has part: feature:1212296-1212522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1198940-1199396:1:exon

position:1199396:1
position: 1199396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1209695-1209800:1:exon

position:1209695:1
position: 1209695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209800:1
position: 1209800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1212296-1212522:1:exon

position:1212296:1
position: 1212296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868558
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868558
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1201123..1211687)
location: region:1201123-1211687:-1
so has part: feature:1201123-1211687:-1:exon
subclass of: SO_0000010

101868558
type: Gene
SIO_000068: ncbigene

position:1201123:-1
position: 1201123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211687:-1
position: 1211687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1201123-1211687:-1:exon

LOC101868558
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868558
product: unc-45 myosin chaperone B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034068897.1
SIO_010081: LOC101868558
subclass of: SO_0000673
so part of: LOC101868558
location: complement(join(1201123..1201455,1202239..1202394,1202507..1202624,1202944..1203059,1203166..1203279,1203628..1203694,1204136..1204263,1204447..1204587,1205027..1205168,1205836..1205930,1206284..1206584,1206921..1207092,1207891..1208061,1208328..1208496,1209056..1209222,1209659..1209748,1210294..1210469,1210777..1210813,1211526..1211687))
location: region:1201123-1211687:-1
so has part: feature:1211526-1211687:-1:exon
so has part: feature:1210777-1210813:-1:exon
so has part: feature:1210294-1210469:-1:exon
so has part: feature:1209659-1209748:-1:exon
so has part: feature:1209056-1209222:-1:exon
so has part: feature:1208328-1208496:-1:exon
so has part: feature:1207891-1208061:-1:exon
so has part: feature:1206921-1207092:-1:exon
so has part: feature:1206284-1206584:-1:exon
so has part: feature:1205836-1205930:-1:exon
so has part: feature:1205027-1205168:-1:exon
so has part: feature:1204447-1204587:-1:exon
so has part: feature:1204136-1204263:-1:exon
so has part: feature:1203628-1203694:-1:exon
so has part: feature:1203166-1203279:-1:exon
so has part: feature:1202944-1203059:-1:exon
so has part: feature:1202507-1202624:-1:exon
so has part: feature:1202239-1202394:-1:exon
so has part: feature:1201123-1201455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1211526-1211687:-1:exon

position:1211526:-1
position: 1211526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1210777-1210813:-1:exon

position:1210777:-1
position: 1210777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210813:-1
position: 1210813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1210294-1210469:-1:exon

position:1210294:-1
position: 1210294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210469:-1
position: 1210469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1209659-1209748:-1:exon

position:1209659:-1
position: 1209659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209748:-1
position: 1209748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1209056-1209222:-1:exon

position:1209056:-1
position: 1209056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209222:-1
position: 1209222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1208328-1208496:-1:exon

position:1208328:-1
position: 1208328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208496:-1
position: 1208496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1207891-1208061:-1:exon

position:1207891:-1
position: 1207891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208061:-1
position: 1208061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1206921-1207092:-1:exon

position:1206921:-1
position: 1206921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207092:-1
position: 1207092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1206284-1206584:-1:exon

position:1206284:-1
position: 1206284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206584:-1
position: 1206584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1205836-1205930:-1:exon

position:1205836:-1
position: 1205836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205930:-1
position: 1205930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1205027-1205168:-1:exon

position:1205027:-1
position: 1205027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205168:-1
position: 1205168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1204447-1204587:-1:exon

position:1204447:-1
position: 1204447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204587:-1
position: 1204587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1204136-1204263:-1:exon

position:1204136:-1
position: 1204136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204263:-1
position: 1204263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1203628-1203694:-1:exon

position:1203628:-1
position: 1203628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203694:-1
position: 1203694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1203166-1203279:-1:exon

position:1203166:-1
position: 1203166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203279:-1
position: 1203279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1202944-1203059:-1:exon

position:1202944:-1
position: 1202944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203059:-1
position: 1203059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1202507-1202624:-1:exon

position:1202507:-1
position: 1202507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202624:-1
position: 1202624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1202239-1202394:-1:exon

position:1202239:-1
position: 1202239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202394:-1
position: 1202394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1201123-1201455:-1:exon

position:1201455:-1
position: 1201455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101868558
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868558
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein unc-45 homolog B
translation: MEDPIQLKEEGNKYFQANDYEKAAQSYTQAIKLNKDKALQAVLYRNRAACFLKKEEYAKAASDASRAIDINSSDIKALYRRSQALEKLGKLDQAFKDAQKCATIEPRNKNFQETLRRLGANIQEKLRIQFSTDLRVQKMFEILLDENSDKEKREKAANNLIILGREEAGAERIFQNNGVSLLLQLIETXNPELVLAAVRTLSEMCTGHKARATAILHYLGIDSICMWMSVDNEEISLAVCSLLQAITDCLLGQGKEEHHGKEEAVVLDTKKDLRMITMRLLDMLVSKKVSGQGRDRALNLLNKNIPRKELKDHDNSRTIFVIDNGLKKILKVAGQIPELPDCLPLTENTQLSASVLLNKLYDDLRCDPERDNYRVICEEYIKSKVDPQDMDKTLHAIQVVSGVLQGPFDLGNKLLGMKGVMEMMVALCGSEREIDQLVAVEALIHASTKLSRATFIISNGVALLKEIYKKTKNEKIKIRALVGLCKLGSAGGTDYGLRQFAEGSTEKLARQCRKWLCNASIDVRTRRWAVEGMSYLTLDADVKDDFVEDEPALQAMLELAKTSDKTILYSVASVLVNCTNSYDTKELVPELVQLAKFSKQHVPEEHPKDKKDFVVKRVKRLLKAGVVSALACMVKADSAVLTDQSKELIARVFLALCEDPKDRGIIVAEGGGKALIPLALEGTEVGKIKASHALAKIAAISNPDMAFPGERVYEVVRPLVSLLNTERDGLQNYEALLGLTNFSGRSDKLRMKIVKEKALPDIENYMFENHDQLRQAATECMCNLVLNKEVQERFVADGNDRLKLVVLLCGEDDEKVQVAAAGALAMLTAAQKKLCSKMTEVTTQWLEILQRLCLHENMEVQHRGLVIAFNLINADKDLAKKLVETELLEILTYIGKQEDPKKQHIINVAHDCLTRCMDYGLIKPLSQA
SIO_010081: LOC101868558
subclass of: SO_0000673
so part of: LOC101868558
location: complement(join(1201192..1201455,1202239..1202394,1202507..1202624,1202944..1203059,1203166..1203279,1203628..1203694,1204136..1204263,1204447..1204587,1205027..1205168,1205836..1205930,1206284..1206584,1206921..1207092,1207891..1208061,1208328..1208496,1209056..1209222,1209659..1209748,1210294..1210469,1210777..1210813,1211526..1211687))
location: region:1201192-1211687:-1
so has part: feature:1211526-1211687:-1:exon
so has part: feature:1210777-1210813:-1:exon
so has part: feature:1210294-1210469:-1:exon
so has part: feature:1209659-1209748:-1:exon
so has part: feature:1209056-1209222:-1:exon
so has part: feature:1208328-1208496:-1:exon
so has part: feature:1207891-1208061:-1:exon
so has part: feature:1206921-1207092:-1:exon
so has part: feature:1206284-1206584:-1:exon
so has part: feature:1205836-1205930:-1:exon
so has part: feature:1205027-1205168:-1:exon
so has part: feature:1204447-1204587:-1:exon
so has part: feature:1204136-1204263:-1:exon
so has part: feature:1203628-1203694:-1:exon
so has part: feature:1203166-1203279:-1:exon
so has part: feature:1202944-1203059:-1:exon
so has part: feature:1202507-1202624:-1:exon
so has part: feature:1202239-1202394:-1:exon
so has part: feature:1201192-1201455:-1:exon

XP_033924788.1
type: Protein
SIO_000068: ncbiprotein

position:1201192:-1
position: 1201192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211526-1211687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210777-1210813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210294-1210469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209659-1209748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1209056-1209222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1208328-1208496:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207891-1208061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1206921-1207092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1206284-1206584:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1205836-1205930:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1205027-1205168:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204447-1204587:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1204136-1204263:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1203628-1203694:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1203166-1203279:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1202944-1203059:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1202507-1202624:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1202239-1202394:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1201192-1201455:-1:exon

LOC101868438
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868438
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1213130..1218451
location: region:1213130-1218451:1
so has part: feature:1213130-1218451:1:exon
subclass of: SO_0000010

101868438
type: Gene
SIO_000068: ncbigene

position:1213130:1
position: 1213130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218451:1
position: 1218451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1213130-1218451:1:exon

LOC101868438
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868438
product: RAD51 paralog D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034069075.1
SIO_010081: LOC101868438
subclass of: SO_0000673
so part of: LOC101868438
location: join(1213130..1213170,1213337..1213456,1214322..1214383,1214538..1214656,1214894..1214975,1215078..1215212,1215639..1215734,1215911..1216001,1216818..1216888,1217763..1217930,1218334..1218451)
location: region:1213130-1218451:1
so has part: feature:1213130-1213170:1:exon
so has part: feature:1213337-1213456:1:exon
so has part: feature:1214322-1214383:1:exon
so has part: feature:1214538-1214656:1:exon
so has part: feature:1214894-1214975:1:exon
so has part: feature:1215078-1215212:1:exon
so has part: feature:1215639-1215734:1:exon
so has part: feature:1215911-1216001:1:exon
so has part: feature:1216818-1216888:1:exon
so has part: feature:1217763-1217930:1:exon
so has part: feature:1218334-1218451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1213130-1213170:1:exon

position:1213170:1
position: 1213170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1213337-1213456:1:exon

position:1213337:1
position: 1213337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213456:1
position: 1213456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1214322-1214383:1:exon

position:1214322:1
position: 1214322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214383:1
position: 1214383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1214538-1214656:1:exon

position:1214538:1
position: 1214538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214656:1
position: 1214656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1214894-1214975:1:exon

position:1214894:1
position: 1214894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214975:1
position: 1214975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1215078-1215212:1:exon

position:1215078:1
position: 1215078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215212:1
position: 1215212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1215639-1215734:1:exon

position:1215639:1
position: 1215639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215734:1
position: 1215734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1215911-1216001:1:exon

position:1215911:1
position: 1215911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216001:1
position: 1216001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1216818-1216888:1:exon

position:1216818:1
position: 1216818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216888:1
position: 1216888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1217763-1217930:1:exon

position:1217763:1
position: 1217763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217930:1
position: 1217930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1218334-1218451:1:exon

position:1218334:1
position: 1218334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868438
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868438
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair protein RAD51 homolog 4
translation: MVVLRAGLCPGLTEEMIQLLRANSIQTVVDFVASDLEYIAQKCSLSYKALVAVRRVLLAQFSAFPTNGADLYEELKSSTAILPTGSPSLDQLLDSGLYTGEVTELMGAPGSGKTQVCLGIAASVSLGLKQHVLFLDSTGGFTASRLYQMLRAQAEEEEEQLEALQRIQVVRVFDIYEMLSALQELRERLSQQVVSSMDPLKIVVIDSVSAVIYPLLGGKQSEGLAIMMQLARELKTLAREFSLAVVVTNQVTRDSSSAPPKPALGRSWSFVPSTRVLLESKEVTLQKATTQRIASLAKSPRQPVGIQAELDIGSADVTPTERL
SIO_010081: LOC101868438
subclass of: SO_0000673
so part of: LOC101868438
location: join(1213375..1213456,1214322..1214383,1214538..1214656,1214894..1214975,1215078..1215212,1215639..1215734,1215911..1216001,1216818..1216888,1217763..1217930,1218334..1218399)
location: region:1213375-1218399:1
so has part: feature:1213375-1213456:1:exon
so has part: feature:1214322-1214383:1:exon
so has part: feature:1214538-1214656:1:exon
so has part: feature:1214894-1214975:1:exon
so has part: feature:1215078-1215212:1:exon
so has part: feature:1215639-1215734:1:exon
so has part: feature:1215911-1216001:1:exon
so has part: feature:1216818-1216888:1:exon
so has part: feature:1217763-1217930:1:exon
so has part: feature:1218334-1218399:1:exon

XP_033924966.1
type: Protein
SIO_000068: ncbiprotein

position:1213375:1
position: 1213375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218399:1
position: 1218399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1213375-1213456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1214322-1214383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1214538-1214656:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1214894-1214975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1215078-1215212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215639-1215734:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215911-1216001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1216818-1216888:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1217763-1217930:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1218334-1218399:1:exon

LOC101868727
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1220307..1248766
location: region:1220307-1248766:1
so has part: feature:1220307-1248766:1:exon
subclass of: SO_0000010

101868727
type: Gene
SIO_000068: ncbigene

position:1220307:1
position: 1220307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248766:1
position: 1248766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1220307-1248766:1:exon

LOC101868727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868727
product: ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034069090.1
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1220307..1220325,1228039..1228113,1237847..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1248766)
location: region:1220307-1248766:1
so has part: feature:1220307-1220325:1:exon
so has part: feature:1228039-1228113:1:exon
so has part: feature:1237847-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1248766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1220307-1220325:1:exon

position:1220325:1
position: 1220325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228039-1228113:1:exon

position:1228039:1
position: 1228039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228113:1
position: 1228113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1237847-1238037:1:exon

position:1237847:1
position: 1237847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238037:1
position: 1238037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1241890-1242294:1:exon

position:1241890:1
position: 1241890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242294:1
position: 1242294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1243830-1243913:1:exon

position:1243830:1
position: 1243830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243913:1
position: 1243913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1244292-1244499:1:exon

position:1244292:1
position: 1244292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244499:1
position: 1244499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1245679-1245702:1:exon

position:1245679:1
position: 1245679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245702:1
position: 1245702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1246254-1248766:1:exon

position:1246254:1
position: 1246254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868727
product: ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034069086.1
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1221039..1221184,1228039..1228113,1237847..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1248766)
location: region:1221039-1248766:1
so has part: feature:1221039-1221184:1:exon
so has part: feature:1228039-1228113:1:exon
so has part: feature:1237847-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1248766:1:exon

position:1221039:1
position: 1221039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221039-1221184:1:exon

position:1221184:1
position: 1221184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228039-1228113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237847-1238037:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246254-1248766:1:exon

LOC101868727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868727
product: ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034069092.1
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1221039..1221184,1237847..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1248766)
location: region:1221039-1248766:1
so has part: feature:1221039-1221184:1:exon
so has part: feature:1237847-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1248766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221039-1221184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237847-1238037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1246254-1248766:1:exon

LOC101868727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868727
product: ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034069088.1
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1221579..1221712,1228039..1228113,1237847..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1248766)
location: region:1221579-1248766:1
so has part: feature:1221579-1221712:1:exon
so has part: feature:1228039-1228113:1:exon
so has part: feature:1237847-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1248766:1:exon

position:1221579:1
position: 1221579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221579-1221712:1:exon

position:1221712:1
position: 1221712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228039-1228113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237847-1238037:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246254-1248766:1:exon

LOC101868727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868727
product: ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034069091.1
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1221883..1221901,1228039..1228113,1237847..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1248766)
location: region:1221883-1248766:1
so has part: feature:1221883-1221901:1:exon
so has part: feature:1228039-1228113:1:exon
so has part: feature:1237847-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1248766:1:exon

position:1221883:1
position: 1221883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221883-1221901:1:exon

position:1221901:1
position: 1221901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228039-1228113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237847-1238037:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246254-1248766:1:exon

LOC101868727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868727
product: ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034069087.1
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1222151..1222251,1228039..1228113,1237847..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1248766)
location: region:1222151-1248766:1
so has part: feature:1222151-1222251:1:exon
so has part: feature:1228039-1228113:1:exon
so has part: feature:1237847-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1248766:1:exon

position:1222151:1
position: 1222151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222151-1222251:1:exon

position:1222251:1
position: 1222251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228039-1228113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237847-1238037:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246254-1248766:1:exon

LOC101868727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868727
product: ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034069089.1
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1226781..1226861,1228039..1228113,1237847..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1248766)
location: region:1226781-1248766:1
so has part: feature:1226781-1226861:1:exon
so has part: feature:1228039-1228113:1:exon
so has part: feature:1237847-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1248766:1:exon

position:1226781:1
position: 1226781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1226781-1226861:1:exon

position:1226861:1
position: 1226861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1228039-1228113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237847-1238037:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1246254-1248766:1:exon

LOC101868727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X1
translation: MWASCCNWFCLDGSPEEMQPQPEQGARAQAYSNPGYSSYPSPTALEQSCKACGMRFDSSSRKHVCLDCKKNFCTSCSSQADGAPLLCHLCQRFRATAFQREELIKMKVKDLRDYLALHEVSTELCREKEDLVLLILGQQPVITQEDQIRTNSFHTSASGQQDFVILPPTGPASSTSHDASPGSADPVSSSLAQEHEQANGYVPPSQVGLTGVEIAAEAPTEEETQSTDSEDNLVQGRKASLSDLTSIGDINALSVRQLKEILARNFVNYKGCCEKWELLERVTRLYKEKDLQHLVSDTDDQTGGAGLPGMEENLCKICMDAPIDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFKS
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1237852..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1246435)
location: region:1237852-1246435:1
so has part: feature:1237852-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1246435:1:exon

XP_033924977.1
type: Protein
SIO_000068: ncbiprotein

position:1237852:1
position: 1237852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246435:1
position: 1246435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237852-1238037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246254-1246435:1:exon

LOC101868727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X1
translation: MWASCCNWFCLDGSPEEMQPQPEQGARAQAYSNPGYSSYPSPTALEQSCKACGMRFDSSSRKHVCLDCKKNFCTSCSSQADGAPLLCHLCQRFRATAFQREELIKMKVKDLRDYLALHEVSTELCREKEDLVLLILGQQPVITQEDQIRTNSFHTSASGQQDFVILPPTGPASSTSHDASPGSADPVSSSLAQEHEQANGYVPPSQVGLTGVEIAAEAPTEEETQSTDSEDNLVQGRKASLSDLTSIGDINALSVRQLKEILARNFVNYKGCCEKWELLERVTRLYKEKDLQHLVSDTDDQTGGAGLPGMEENLCKICMDAPIDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFKS
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1237852..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1246435)
location: region:1237852-1246435:1
so has part: feature:1237852-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1246435:1:exon

XP_033924978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1237852-1238037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246254-1246435:1:exon

LOC101868727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X1
translation: MWASCCNWFCLDGSPEEMQPQPEQGARAQAYSNPGYSSYPSPTALEQSCKACGMRFDSSSRKHVCLDCKKNFCTSCSSQADGAPLLCHLCQRFRATAFQREELIKMKVKDLRDYLALHEVSTELCREKEDLVLLILGQQPVITQEDQIRTNSFHTSASGQQDFVILPPTGPASSTSHDASPGSADPVSSSLAQEHEQANGYVPPSQVGLTGVEIAAEAPTEEETQSTDSEDNLVQGRKASLSDLTSIGDINALSVRQLKEILARNFVNYKGCCEKWELLERVTRLYKEKDLQHLVSDTDDQTGGAGLPGMEENLCKICMDAPIDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFKS
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1237852..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1246435)
location: region:1237852-1246435:1
so has part: feature:1237852-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1246435:1:exon

XP_033924979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1237852-1238037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246254-1246435:1:exon

LOC101868727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X1
translation: MWASCCNWFCLDGSPEEMQPQPEQGARAQAYSNPGYSSYPSPTALEQSCKACGMRFDSSSRKHVCLDCKKNFCTSCSSQADGAPLLCHLCQRFRATAFQREELIKMKVKDLRDYLALHEVSTELCREKEDLVLLILGQQPVITQEDQIRTNSFHTSASGQQDFVILPPTGPASSTSHDASPGSADPVSSSLAQEHEQANGYVPPSQVGLTGVEIAAEAPTEEETQSTDSEDNLVQGRKASLSDLTSIGDINALSVRQLKEILARNFVNYKGCCEKWELLERVTRLYKEKDLQHLVSDTDDQTGGAGLPGMEENLCKICMDAPIDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFKS
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1237852..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1246435)
location: region:1237852-1246435:1
so has part: feature:1237852-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1246435:1:exon

XP_033924980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1237852-1238037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246254-1246435:1:exon

LOC101868727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X1
translation: MWASCCNWFCLDGSPEEMQPQPEQGARAQAYSNPGYSSYPSPTALEQSCKACGMRFDSSSRKHVCLDCKKNFCTSCSSQADGAPLLCHLCQRFRATAFQREELIKMKVKDLRDYLALHEVSTELCREKEDLVLLILGQQPVITQEDQIRTNSFHTSASGQQDFVILPPTGPASSTSHDASPGSADPVSSSLAQEHEQANGYVPPSQVGLTGVEIAAEAPTEEETQSTDSEDNLVQGRKASLSDLTSIGDINALSVRQLKEILARNFVNYKGCCEKWELLERVTRLYKEKDLQHLVSDTDDQTGGAGLPGMEENLCKICMDAPIDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFKS
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1237852..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1246435)
location: region:1237852-1246435:1
so has part: feature:1237852-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1246435:1:exon

XP_033924981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1237852-1238037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246254-1246435:1:exon

LOC101868727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X1
translation: MWASCCNWFCLDGSPEEMQPQPEQGARAQAYSNPGYSSYPSPTALEQSCKACGMRFDSSSRKHVCLDCKKNFCTSCSSQADGAPLLCHLCQRFRATAFQREELIKMKVKDLRDYLALHEVSTELCREKEDLVLLILGQQPVITQEDQIRTNSFHTSASGQQDFVILPPTGPASSTSHDASPGSADPVSSSLAQEHEQANGYVPPSQVGLTGVEIAAEAPTEEETQSTDSEDNLVQGRKASLSDLTSIGDINALSVRQLKEILARNFVNYKGCCEKWELLERVTRLYKEKDLQHLVSDTDDQTGGAGLPGMEENLCKICMDAPIDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFKS
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1237852..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1246435)
location: region:1237852-1246435:1
so has part: feature:1237852-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1246435:1:exon

XP_033924982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1237852-1238037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246254-1246435:1:exon

LOC101868727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X1
translation: MWASCCNWFCLDGSPEEMQPQPEQGARAQAYSNPGYSSYPSPTALEQSCKACGMRFDSSSRKHVCLDCKKNFCTSCSSQADGAPLLCHLCQRFRATAFQREELIKMKVKDLRDYLALHEVSTELCREKEDLVLLILGQQPVITQEDQIRTNSFHTSASGQQDFVILPPTGPASSTSHDASPGSADPVSSSLAQEHEQANGYVPPSQVGLTGVEIAAEAPTEEETQSTDSEDNLVQGRKASLSDLTSIGDINALSVRQLKEILARNFVNYKGCCEKWELLERVTRLYKEKDLQHLVSDTDDQTGGAGLPGMEENLCKICMDAPIDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFKS
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1237852..1238037,1241890..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1246435)
location: region:1237852-1246435:1
so has part: feature:1237852-1238037:1:exon
so has part: feature:1241890-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1246435:1:exon

XP_033924983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1237852-1238037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241890-1242294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246254-1246435:1:exon

LOC101868727
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868727
product: ring finger and FYVE like domain containing E3 ubiquitin protein ligase, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034069093.1
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1237929..1238037,1241817..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1248766)
location: region:1237929-1248766:1
so has part: feature:1237929-1238037:1:exon
so has part: feature:1241817-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1248766:1:exon

position:1237929:1
position: 1237929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237929-1238037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241817-1242294:1:exon

position:1241817:1
position: 1241817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246254-1248766:1:exon

LOC101868727
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase rififylin isoform X2
translation: MGLILFPSHYQHVCLDCKKNFCTSCSSQADGAPLLCHLCQRFRATAFQREELIKMKVKDLRDYLALHEVSTELCREKEDLVLLILGQQPVITQEDQIRTNSFHTSASGQQDFVILPPTGPASSTSHDASPGSADPVSSSLAQEHEQANGYVPPSQVGLTGVEIAAEAPTEEETQSTDSEDNLVQGRKASLSDLTSIGDINALSVRQLKEILARNFVNYKGCCEKWELLERVTRLYKEKDLQHLVSDTDDQTGGAGLPGMEENLCKICMDAPIDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFKS
SIO_010081: LOC101868727
subclass of: SO_0000673
so part of: LOC101868727
location: join(1241857..1242294,1243830..1243913,1244292..1244499,1245679..1245702,1246254..1246435)
location: region:1241857-1246435:1
so has part: feature:1241857-1242294:1:exon
so has part: feature:1243830-1243913:1:exon
so has part: feature:1244292-1244499:1:exon
so has part: feature:1245679-1245702:1:exon
so has part: feature:1246254-1246435:1:exon

XP_033924984.1
type: Protein
SIO_000068: ncbiprotein

position:1241857:1
position: 1241857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241857-1242294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1243830-1243913:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1244292-1244499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1245679-1245702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246254-1246435:1:exon

LOC101868898
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1249566..1264385)
location: region:1249566-1264385:-1
so has part: feature:1249566-1264385:-1:exon
subclass of: SO_0000010

101868898
type: Gene
SIO_000068: ncbigene

position:1249566:-1
position: 1249566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264385:-1
position: 1264385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1249566-1264385:-1:exon

LOC101868898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868898
product: DNA ligase 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005154320.4
SIO_010081: LOC101868898
subclass of: SO_0000673
so part of: LOC101868898
location: complement(join(1249566..1250083,1250866..1250957,1251766..1251941,1252881..1253027,1253854..1253928,1254704..1254846,1255003..1255126,1255392..1255469,1256349..1256436,1256846..1256925,1257655..1257786,1258242..1258397,1259049..1259217,1259333..1259410,1260063..1260229,1261113..1261264,1261693..1261890,1262773..1262910,1263332..1263906,1264277..1264385))
location: region:1249566-1264385:-1
so has part: feature:1264277-1264385:-1:exon
so has part: feature:1263332-1263906:-1:exon
so has part: feature:1262773-1262910:-1:exon
so has part: feature:1261693-1261890:-1:exon
so has part: feature:1261113-1261264:-1:exon
so has part: feature:1260063-1260229:-1:exon
so has part: feature:1259333-1259410:-1:exon
so has part: feature:1259049-1259217:-1:exon
so has part: feature:1258242-1258397:-1:exon
so has part: feature:1257655-1257786:-1:exon
so has part: feature:1256846-1256925:-1:exon
so has part: feature:1256349-1256436:-1:exon
so has part: feature:1255392-1255469:-1:exon
so has part: feature:1255003-1255126:-1:exon
so has part: feature:1254704-1254846:-1:exon
so has part: feature:1253854-1253928:-1:exon
so has part: feature:1252881-1253027:-1:exon
so has part: feature:1251766-1251941:-1:exon
so has part: feature:1250866-1250957:-1:exon
so has part: feature:1249566-1250083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1264277-1264385:-1:exon

position:1264277:-1
position: 1264277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1263332-1263906:-1:exon

position:1263332:-1
position: 1263332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263906:-1
position: 1263906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1262773-1262910:-1:exon

position:1262773:-1
position: 1262773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262910:-1
position: 1262910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1261693-1261890:-1:exon

position:1261693:-1
position: 1261693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261890:-1
position: 1261890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1261113-1261264:-1:exon

position:1261113:-1
position: 1261113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261264:-1
position: 1261264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1260063-1260229:-1:exon

position:1260063:-1
position: 1260063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260229:-1
position: 1260229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1259333-1259410:-1:exon

position:1259333:-1
position: 1259333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259410:-1
position: 1259410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1259049-1259217:-1:exon

position:1259049:-1
position: 1259049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259217:-1
position: 1259217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1258242-1258397:-1:exon

position:1258242:-1
position: 1258242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258397:-1
position: 1258397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1257655-1257786:-1:exon

position:1257655:-1
position: 1257655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257786:-1
position: 1257786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1256846-1256925:-1:exon

position:1256846:-1
position: 1256846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256925:-1
position: 1256925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1256349-1256436:-1:exon

position:1256349:-1
position: 1256349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256436:-1
position: 1256436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1255392-1255469:-1:exon

position:1255392:-1
position: 1255392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255469:-1
position: 1255469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1255003-1255126:-1:exon

position:1255003:-1
position: 1255003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255126:-1
position: 1255126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1254704-1254846:-1:exon

position:1254704:-1
position: 1254704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254846:-1
position: 1254846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1253854-1253928:-1:exon

position:1253854:-1
position: 1253854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253928:-1
position: 1253928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1252881-1253027:-1:exon

position:1252881:-1
position: 1252881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253027:-1
position: 1253027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1251766-1251941:-1:exon

position:1251766:-1
position: 1251766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251941:-1
position: 1251941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1250866-1250957:-1:exon

position:1250866:-1
position: 1250866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250957:-1
position: 1250957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1249566-1250083:-1:exon

position:1250083:-1
position: 1250083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101868898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13146
gene: LOC101868898
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DNA ligase 3
translation: MPTGSRTLSQAVRALGRGTELFFHTQVSLARPFLCCAGLPGASLRCWYQLLLQPGSLRSAGRNQRGGAGAFHLSLLVNTWPRQACTAVEAMAEQRYCVDYAKRGTAGCKKCKEKIVKGMVRIGKIVPNPFTESGGDMKEWYHVKCMFEKLDKARATTKKIEDITDLEGWEELQDVEKDLINKHISEANSKAGSTPKKKVIVQAKLTATGQLTTKDPLGLSNPSPKKFSGFTAKPKNSDDISANSSHKSSLSAKQCDPKHKDCLLREFRKLCAMVAEKPSYNVKTQIIQDFLKKGSGGDGFHGDVYLTIKLLLPGVIKVVYNLNDKQIVKLFSRIFNCNQEEMIRDLEQGDVSETIRLFFEQSKCCPPAAKSLLTIQEVDEFLIQLSKLTKEDDQQSVLQHITRRCTGNDLKCIIRLIKHDLKMNAGAKHVLDALDPNAYEAFKASRNLQDVVERVLKNKQEAEKMPGLKRTLSVQASLMTPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPQAFPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMITRVIREGLEGLVLKDIKGNYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSEKWCTVTKCSGGHDDATLARLQTELDMVKISKDPSKIPKWLKINKIYYPDFIVPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLQQLKELYQLSKEKADFNVTAGEEDESTAGSSGENEGNSRSSTPHSSIKTPPSKSPAKAPKPEESKAVIGSPQKSEEKRGEKRKASEMEDNGKKILLDIFTGVRLYLSPSVKDFDKIQRYFIAYDGDLVTESDTASATHVIGDIDDNPGAKRVSPKWIWECIRKQRLVAPC
SIO_010081: LOC101868898
subclass of: SO_0000673
so part of: LOC101868898
location: complement(join(1249850..1250083,1250866..1250957,1251766..1251941,1252881..1253027,1253854..1253928,1254704..1254846,1255003..1255126,1255392..1255469,1256349..1256436,1256846..1256925,1257655..1257786,1258242..1258397,1259049..1259217,1259333..1259410,1260063..1260229,1261113..1261264,1261693..1261890,1262773..1262910,1263332..1263887))
location: region:1249850-1263887:-1
so has part: feature:1263332-1263887:-1:exon
so has part: feature:1262773-1262910:-1:exon
so has part: feature:1261693-1261890:-1:exon
so has part: feature:1261113-1261264:-1:exon
so has part: feature:1260063-1260229:-1:exon
so has part: feature:1259333-1259410:-1:exon
so has part: feature:1259049-1259217:-1:exon
so has part: feature:1258242-1258397:-1:exon
so has part: feature:1257655-1257786:-1:exon
so has part: feature:1256846-1256925:-1:exon
so has part: feature:1256349-1256436:-1:exon
so has part: feature:1255392-1255469:-1:exon
so has part: feature:1255003-1255126:-1:exon
so has part: feature:1254704-1254846:-1:exon
so has part: feature:1253854-1253928:-1:exon
so has part: feature:1252881-1253027:-1:exon
so has part: feature:1251766-1251941:-1:exon
so has part: feature:1250866-1250957:-1:exon
so has part: feature:1249850-1250083:-1:exon

XP_005154377.3
type: Protein
SIO_000068: ncbiprotein

position:1249850:-1
position: 1249850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263887:-1
position: 1263887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263332-1263887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1262773-1262910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1261693-1261890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1261113-1261264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260063-1260229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1259333-1259410:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1259049-1259217:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1258242-1258397:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1257655-1257786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1256846-1256925:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1256349-1256436:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1255392-1255469:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1255003-1255126:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1254704-1254846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1253854-1253928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1252881-1253027:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1251766-1251941:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1250866-1250957:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1249850-1250083:-1:exon

LOC115947332
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC115947332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1480714..1481987
location: region:1480714-1481987:1
so has part: feature:1480714-1481987:1:exon
subclass of: SO_0000011

115947332
type: Gene
SIO_000068: ncbigene

position:1480714:1
position: 1480714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481987:1
position: 1481987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480714-1481987:1:exon

LOC115947332
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 13146
nc RNA class: lncRNA
gene: LOC115947332
product: uncharacterized LOC115947332
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004081273.2
SIO_010081: LOC115947332
subclass of: SO_0000673
so part of: LOC115947332
location: join(1480714..1480986,1481371..1481489,1481823..1481987)
location: region:1480714-1481987:1
so has part: feature:1480714-1480986:1:exon
so has part: feature:1481371-1481489:1:exon
so has part: feature:1481823-1481987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1480714-1480986:1:exon

position:1480986:1
position: 1480986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1481371-1481489:1:exon

position:1481371:1
position: 1481371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481489:1
position: 1481489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1481823-1481987:1:exon

position:1481823:1
position: 1481823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101868779
type: Gene
subclass of: SO_0000704
RO_0002162: 13146
gene: LOC101868779
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1516957..1528816)
location: region:1516957-1528816:-1
so has part: feature:1516957-1528816:-1:exon
subclass of: SO_0000010

101868779
type: Gene
SIO_000068: ncbigene

position:1516957:-1
position: 1516957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528816:-1
position: 1528816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1516957-1528816:-1:exon

LOC101868779
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 13146
gene: LOC101868779
product: transmembrane protein 132E
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034068881.1
SIO_010081: LOC101868779
subclass of: SO_0000673
so part of: LOC101868779
location: complement(join(1516957..1517987,1518446..1518637,1518710..1518989,1520060..1520265,1523884..1524027,1524232..1524422,1527706..1527846,1528452..1528816))
location: region:1516957-1528816:-1
so has part: feature:1528452-1528816:-1:exon
so has part: feature:1527706-1527846:-1:exon
so has part: feature:1524232-1524422:-1:exon
so has part: feature:1523884-1524027:-1:exon
so has part: feature:1520060-1520265:-1:exon
so has part: feature:1518710-1518989:-1:exon
so has part: feature:1518446-1518637:-1:exon
so has part: feature:1516957-1517987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1528452-1528816:-1:exon

position:1528452:-1
position: 1528452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1527706-1527846:-1:exon

position:1527706:-1
position: 1527706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1527846:-1
position: 1527846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1524232-1524422:-1:exon

position:1524232:-1
position: 1524232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524422:-1
position: 1524422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1523884-1524027:-1:exon

position:1523884:-1
position: 1523884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524027:-1
position: 1524027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1520060-1520265:-1:exon

position:1520060:-1
position: 1520060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520265:-1
position: 1520265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1518710-1518989:-1:exon

position:1518710:-1
position: 1518710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518989:-1
position: 1518989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1518446-1518637:-1:exon

position:1518446:-1
position: 1518446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518637:-1
position: 1518637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1516957-1517987:-1:exon