Streptococcus pneumoniae strain Hu17 plasmid pSpn_Hu17.
Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.
Draft genome sequences of two Streptococcus pneumoniae serotype 19A sequence type 226 clinical isolates from Hungary with high-level beta-lactam resistance and penicillin sensitive phenotype
Submitted (22-MAR-2017) Microbiology, University of Kaiserslautern, Paul-Ehrlich-Strasse 23, Kaiserslautern 67663, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCP020550.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.6\nGenome Coverage :: 157x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 04:45:11\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,172\nCDSs (total) :: 2,143\nGenes (coding) :: 2,027\nCDSs (with protein) :: 2,027\nGenes (RNA) :: 29\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 23\nncRNAs :: 3\nPseudo Genes (total) :: 116\nCDSs (without protein) :: 116\nPseudo Genes (ambiguous residues) :: 0 of 116\nPseudo Genes (frameshifted) :: 53 of 116\nPseudo Genes (incomplete) :: 60 of 116\nPseudo Genes (internal stop) :: 30 of 116\nPseudo Genes (multiple problems) :: 24 of 116\n##Genome-Annotation-Data-END##
COORDINATES: protein motif:HMM:NF017518.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
zonular occludens toxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000660642.1
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.