Clarias gariepinus mitochondrion, complete genome.
type: Entry
definition: Clarias gariepinus mitochondrion, complete genome.
sequence version: NC_027661.1
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_027661.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Clarias gariepinus (North African catfish)
organism: Clarias gariepinus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Clariidae; Clarias.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to KT001082.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16508
topology: circular
so has quality: SO_0000988
location: 1..16508
location: region:1-16508:1
RO_0002162: 13013

NC_027661
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Characterization of Clarias gariepinus mitochondrial genome sequence and a comparative analysis with other catfishes
author: Han, C.
author: Li, Q.
author: Xu, J.
author: Li, X.
author: Huang, J.
journal: Biologia
volume: 70
issue: 9
pages: 1245-1253
year: 2016

2
title: Direct Submission
journal: Submitted (28-JUL-2015) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Han, C.
author: Li, Q.
author: Huang, J.
journal: Submitted (01-JUN-2015) College of Life Science, Sun Yat-Sen University, Xingang West Road No. 135, Guangzhou, Guangdong 510000, P.R. China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16508:1
position: 16508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16508:1:source
so part of: sequence
organism: Clarias gariepinus
organelle: mitochondrion
mol type: genomic DNA
tissue type: muscle

13013
type: Taxonomy
SIO_000068: taxonomy

AFL55_gt01
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt01
so part of: sequence
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:exon
subclass of: SO_0000663

25103323
type: Gene
SIO_000068: ncbigene

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:exon

AFL55_gt01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt01
product: tRNA-Phe
SIO_010081: AFL55_gt01
subclass of: SO_0000673
so part of: AFL55_gt01
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:exon

AFL55_gr02
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gr02
so part of: sequence
location: 70..1021
location: region:70-1021:1
so has part: feature:70-1021:1:exon
subclass of: SO_0000573

25103324
type: Gene
SIO_000068: ncbigene

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021:1
position: 1021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-1021:1:exon

AFL55_gr02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 13013
locus tag: AFL55_gr02
product: 12S ribosomal RNA
SIO_010081: AFL55_gr02
subclass of: SO_0000673
so part of: AFL55_gr02
location: 70..1021
location: region:70-1021:1
so has part: feature:70-1021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70-1021:1:exon

AFL55_gt02
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt02
so part of: sequence
location: 1022..1093
location: region:1022-1093:1
so has part: feature:1022-1093:1:exon
subclass of: SO_0000663

25103325
type: Gene
SIO_000068: ncbigene

position:1022:1
position: 1022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093:1
position: 1093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022-1093:1:exon

AFL55_gt02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt02
product: tRNA-Val
SIO_010081: AFL55_gt02
subclass of: SO_0000673
so part of: AFL55_gt02
location: 1022..1093
location: region:1022-1093:1
so has part: feature:1022-1093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1022-1093:1:exon

AFL55_gr01
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gr01
so part of: sequence
location: 1094..2768
location: region:1094-2768:1
so has part: feature:1094-2768:1:exon
subclass of: SO_0000573

25103326
type: Gene
SIO_000068: ncbigene

position:1094:1
position: 1094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2768:1
position: 2768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094-2768:1:exon

AFL55_gr01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 13013
locus tag: AFL55_gr01
product: 16S ribosomal RNA
SIO_010081: AFL55_gr01
subclass of: SO_0000673
so part of: AFL55_gr01
location: 1094..2768
location: region:1094-2768:1
so has part: feature:1094-2768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1094-2768:1:exon

AFL55_gt03
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt03
so part of: sequence
location: 2769..2843
location: region:2769-2843:1
so has part: feature:2769-2843:1:exon
subclass of: SO_0000663

25103327
type: Gene
SIO_000068: ncbigene

position:2769:1
position: 2769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2843:1
position: 2843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2769-2843:1:exon

AFL55_gt03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt03
product: tRNA-Leu
codon recognized: UUR
SIO_010081: AFL55_gt03
subclass of: SO_0000673
so part of: AFL55_gt03
location: 2769..2843
location: region:2769-2843:1
so has part: feature:2769-2843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2769-2843:1:exon

AFL55_gp13
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: ND1
locus tag: AFL55_gp13
so part of: sequence
location: 2844..3818
location: region:2844-3818:1
so has part: feature:2844-3818:1:exon
subclass of: SO_0000010

25103328
type: Gene
SIO_000068: ncbigene

position:2844:1
position: 2844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3818:1
position: 3818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2844-3818:1:exon

AFL55_gp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: ND1
locus tag: AFL55_gp13
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MMTLLMTHIINPLAYIVPVLLALAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLTTPVLALTLALMLWAPMPIPNPVADMNLGMLFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSTIIFTGGFTLQMFNTTQEAVWLMLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSTILFLGATYTPITPELASINIMTKAALLSVLFLWIRASYPRFRYDQLMHLVWKNFLPMTLALILWHAALPIALTGLPPQL
SIO_010081: AFL55_gp13
subclass of: SO_0000673
so part of: AFL55_gp13
location: 2844..3818
location: region:2844-3818:1
so has part: feature:2844-3818:1:exon

YP_009160664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2844-3818:1:exon

AFL55_gt04
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt04
so part of: sequence
location: 3824..3895
location: region:3824-3895:1
so has part: feature:3824-3895:1:exon
subclass of: SO_0000663

25103310
type: Gene
SIO_000068: ncbigene

position:3824:1
position: 3824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3895:1
position: 3895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3824-3895:1:exon

AFL55_gt04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt04
product: tRNA-Ile
SIO_010081: AFL55_gt04
subclass of: SO_0000673
so part of: AFL55_gt04
location: 3824..3895
location: region:3824-3895:1
so has part: feature:3824-3895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3824-3895:1:exon

AFL55_gt05
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt05
so part of: sequence
location: complement(3895..3965)
location: region:3895-3965:-1
so has part: feature:3895-3965:-1:exon
subclass of: SO_0000663

25103329
type: Gene
SIO_000068: ncbigene

position:3895:-1
position: 3895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3965:-1
position: 3965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3895-3965:-1:exon

AFL55_gt05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt05
product: tRNA-Gln
SIO_010081: AFL55_gt05
subclass of: SO_0000673
so part of: AFL55_gt05
location: complement(3895..3965)
location: region:3895-3965:-1
so has part: feature:3895-3965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3895-3965:-1:exon

AFL55_gt06
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt06
so part of: sequence
location: 3965..4034
location: region:3965-4034:1
so has part: feature:3965-4034:1:exon
subclass of: SO_0000663

25103330
type: Gene
SIO_000068: ncbigene

position:3965:1
position: 3965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4034:1
position: 4034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3965-4034:1:exon

AFL55_gt06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt06
product: tRNA-Met
SIO_010081: AFL55_gt06
subclass of: SO_0000673
so part of: AFL55_gt06
location: 3965..4034
location: region:3965-4034:1
so has part: feature:3965-4034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3965-4034:1:exon

AFL55_gp12
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: ND2
locus tag: AFL55_gp12
so part of: sequence
location: 4035..5079
location: region:4035-5079:1
so has part: feature:4035-5079:1:exon
subclass of: SO_0000010

25103331
type: Gene
SIO_000068: ncbigene

position:4035:1
position: 4035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5079:1
position: 5079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4035-5079:1:exon

AFL55_gp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: ND2
locus tag: AFL55_gp12
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5079,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MSPYVIMILLSSLGLGTTLTFMSSHWLLAWMGLEINTLAILPLMAQHHHPRAVEATTKYFLAQAAAAATILFASTMNAWNTGEWNISCLTDQTAVTLTTMALALKVGLAPMHFWMPPVMQGLDLTTGLIMATWQKLAPFSLIIQMAPLAHPQLLTTLGLASVFIGGWAGLNQTQLRKIMAYSSIAHLGWMITITQFKPELTILTLIMYIIMTSATFLTFKLMGATKINTLAMNWPKTPIITATTALTLLSLGGLPPLTGFMPKWLILQELTTQNLPLTATIMALSALLSLYFYLRLCYAMTLTISPNTNNSSTPWRLQNNQNTILLAMFMTATLLLLPLTPLVQALVN
SIO_010081: AFL55_gp12
subclass of: SO_0000673
so part of: AFL55_gp12
location: 4035..5079
location: region:4035-5079:1
so has part: feature:4035-5079:1:exon

YP_009160665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4035-5079:1:exon

AFL55_gt07
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt07
so part of: sequence
location: 5080..5150
location: region:5080-5150:1
so has part: feature:5080-5150:1:exon
subclass of: SO_0000663

25103311
type: Gene
SIO_000068: ncbigene

position:5080:1
position: 5080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5150:1
position: 5150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5080-5150:1:exon

AFL55_gt07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt07
product: tRNA-Trp
SIO_010081: AFL55_gt07
subclass of: SO_0000673
so part of: AFL55_gt07
location: 5080..5150
location: region:5080-5150:1
so has part: feature:5080-5150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5080-5150:1:exon

AFL55_gt08
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt08
so part of: sequence
location: complement(5154..5222)
location: region:5154-5222:-1
so has part: feature:5154-5222:-1:exon
subclass of: SO_0000663

25103332
type: Gene
SIO_000068: ncbigene

position:5154:-1
position: 5154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5222:-1
position: 5222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5154-5222:-1:exon

AFL55_gt08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt08
product: tRNA-Ala
SIO_010081: AFL55_gt08
subclass of: SO_0000673
so part of: AFL55_gt08
location: complement(5154..5222)
location: region:5154-5222:-1
so has part: feature:5154-5222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5154-5222:-1:exon

AFL55_gt09
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt09
so part of: sequence
location: complement(5224..5296)
location: region:5224-5296:-1
so has part: feature:5224-5296:-1:exon
subclass of: SO_0000663

25103333
type: Gene
SIO_000068: ncbigene

position:5224:-1
position: 5224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5296:-1
position: 5296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5224-5296:-1:exon

AFL55_gt09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt09
product: tRNA-Asn
SIO_010081: AFL55_gt09
subclass of: SO_0000673
so part of: AFL55_gt09
location: complement(5224..5296)
location: region:5224-5296:-1
so has part: feature:5224-5296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5224-5296:-1:exon

AFL55_gt10
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt10
so part of: sequence
location: complement(5328..5394)
location: region:5328-5394:-1
so has part: feature:5328-5394:-1:exon
subclass of: SO_0000663

25103334
type: Gene
SIO_000068: ncbigene

position:5328:-1
position: 5328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5394:-1
position: 5394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5328-5394:-1:exon

AFL55_gt10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt10
product: tRNA-Cys
SIO_010081: AFL55_gt10
subclass of: SO_0000673
so part of: AFL55_gt10
location: complement(5328..5394)
location: region:5328-5394:-1
so has part: feature:5328-5394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5328-5394:-1:exon

AFL55_gt11
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt11
so part of: sequence
location: complement(5406..5475)
location: region:5406-5475:-1
so has part: feature:5406-5475:-1:exon
subclass of: SO_0000663

25103335
type: Gene
SIO_000068: ncbigene

position:5406:-1
position: 5406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5475:-1
position: 5475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5406-5475:-1:exon

AFL55_gt11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt11
product: tRNA-Tyr
SIO_010081: AFL55_gt11
subclass of: SO_0000673
so part of: AFL55_gt11
location: complement(5406..5475)
location: region:5406-5475:-1
so has part: feature:5406-5475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5406-5475:-1:exon

AFL55_gp11
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: COX1
locus tag: AFL55_gp11
so part of: sequence
location: 5477..7027
location: region:5477-7027:1
so has part: feature:5477-7027:1:exon
subclass of: SO_0000010

25103336
type: Gene
SIO_000068: ncbigene

position:5477:1
position: 5477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7027:1
position: 7027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5477-7027:1:exon

AFL55_gp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: COX1
locus tag: AFL55_gp11
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MTITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELAQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILASINFITTIINMKPPAISQYQTPLFVWSVMITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPMLWALGFIFLFTVGGLTGIMLANSSLDIMLHDTYYVVAHFHYVLSMGAVFAIMGAFVHWFPLFTGYTMHDTWTKIHFGTMFVGVNLTFFPQHFLGLAGMPRRYSDYPDAYSLWNIISSIGSMVSMVAVVMFLFILWEAFAAKREVLSVELTATNAEWLHGCPPPYHTFEEPAFVQVQTN
SIO_010081: AFL55_gp11
subclass of: SO_0000673
so part of: AFL55_gp11
location: 5477..7027
location: region:5477-7027:1
so has part: feature:5477-7027:1:exon

YP_009160666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5477-7027:1:exon

AFL55_gt12
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt12
so part of: sequence
location: complement(7028..7098)
location: region:7028-7098:-1
so has part: feature:7028-7098:-1:exon
subclass of: SO_0000663

25103312
type: Gene
SIO_000068: ncbigene

position:7028:-1
position: 7028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7098:-1
position: 7098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7028-7098:-1:exon

AFL55_gt12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt12
product: tRNA-Ser
codon recognized: UCN
SIO_010081: AFL55_gt12
subclass of: SO_0000673
so part of: AFL55_gt12
location: complement(7028..7098)
location: region:7028-7098:-1
so has part: feature:7028-7098:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7028-7098:-1:exon

AFL55_gt13
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt13
so part of: sequence
location: 7103..7175
location: region:7103-7175:1
so has part: feature:7103-7175:1:exon
subclass of: SO_0000663

25103337
type: Gene
SIO_000068: ncbigene

position:7103:1
position: 7103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7175:1
position: 7175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7103-7175:1:exon

AFL55_gt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt13
product: tRNA-Asp
SIO_010081: AFL55_gt13
subclass of: SO_0000673
so part of: AFL55_gt13
location: 7103..7175
location: region:7103-7175:1
so has part: feature:7103-7175:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7103-7175:1:exon

AFL55_gp10
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: COX2
locus tag: AFL55_gp10
so part of: sequence
location: 7190..7880
location: region:7190-7880:1
so has part: feature:7190-7880:1:exon
subclass of: SO_0000010

25103338
type: Gene
SIO_000068: ncbigene

position:7190:1
position: 7190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7880:1
position: 7880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7190-7880:1:exon

AFL55_gp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: COX2
locus tag: AFL55_gp10
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:7880,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPSQLGFQDAASPVMEELLHLHDHALMIVFLISTLVLYIIVVMVTTKLTNKYILDSQEIEIVWTILPAVILIMIALPSLRILYLMDEVNDPHLTVKAMGHQWYWSYEYTDYENLAFDSYMIPTQDLAPGQFRLLETDHRMVVPMESPIRVLVSAEDVLHSWAVPALGVKMDAIPGRLNQTSFITSRPGVFYGQCSEICGANHSFMPIVVEAVPLEHFENWSSLMLEDA
SIO_010081: AFL55_gp10
subclass of: SO_0000673
so part of: AFL55_gp10
location: 7190..7880
location: region:7190-7880:1
so has part: feature:7190-7880:1:exon

YP_009160667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7190-7880:1:exon

AFL55_gt14
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt14
so part of: sequence
location: 7881..7954
location: region:7881-7954:1
so has part: feature:7881-7954:1:exon
subclass of: SO_0000663

25103313
type: Gene
SIO_000068: ncbigene

position:7881:1
position: 7881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7954:1
position: 7954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7881-7954:1:exon

AFL55_gt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt14
product: tRNA-Lys
SIO_010081: AFL55_gt14
subclass of: SO_0000673
so part of: AFL55_gt14
location: 7881..7954
location: region:7881-7954:1
so has part: feature:7881-7954:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7881-7954:1:exon

AFL55_gp09
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: ATP8
locus tag: AFL55_gp09
so part of: sequence
location: 7956..8123
location: region:7956-8123:1
so has part: feature:7956-8123:1:exon
subclass of: SO_0000010

25103339
type: Gene
SIO_000068: ncbigene

position:7956:1
position: 7956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8123:1
position: 8123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7956-8123:1:exon

AFL55_gp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: ATP8
locus tag: AFL55_gp09
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPAPWFAILVFSWLIFLTIIPNKVMNHTFTNEITTLDAENLKSDTWNWPWH
SIO_010081: AFL55_gp09
subclass of: SO_0000673
so part of: AFL55_gp09
location: 7956..8123
location: region:7956-8123:1
so has part: feature:7956-8123:1:exon

YP_009160668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7956-8123:1:exon

AFL55_gp08
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: ATP6
locus tag: AFL55_gp08
so part of: sequence
location: 8114..8797
location: region:8114-8797:1
so has part: feature:8114-8797:1:exon
subclass of: SO_0000010

25103314
type: Gene
SIO_000068: ncbigene

position:8114:1
position: 8114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8797:1
position: 8797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8114-8797:1:exon

AFL55_gp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: ATP6
locus tag: AFL55_gp08
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MALNLFDQFMSPTHFGIPLIAIALTLPWILVPSPTNRYQTNRLISLQNWFIKTFTQQLLTPLNKGGHKWALILTSLMIFILTLNILGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGLRNQPTAALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTATITLLPMMTTVATLTAILLVLLTLLEVAVAIIQAYVFVLLLSLYLQENV
SIO_010081: AFL55_gp08
subclass of: SO_0000673
so part of: AFL55_gp08
location: 8114..8797
location: region:8114-8797:1
so has part: feature:8114-8797:1:exon

YP_009160669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8114-8797:1:exon

AFL55_gp07
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: COX3
locus tag: AFL55_gp07
so part of: sequence
location: 8797..9580
location: region:8797-9580:1
so has part: feature:8797-9580:1:exon
subclass of: SO_0000010

25103315
type: Gene
SIO_000068: ncbigene

position:9580:1
position: 9580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8797-9580:1:exon

AFL55_gp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: COX3
locus tag: AFL55_gp07
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9580,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHAYHMVDPSPWPLTGAVAALLMTSGLAIWFHFHSTILMTLGLALMLLTMYQWWRDIVRESTFQGHHTPPVQKGLRYGMILFITSEVFFFIGFFWAFYHSSLAPTPELGGCWPPTGITPLDPFEVPLLNTAVLLASGVTVTWSHHSIMEGERKQAIQSLALTILLGFYFTALQAMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTFLTICLLRQIQYHFTSEHHFGFEAAAWYWHFVDVVWLFLYVSIYWWGS
SIO_010081: AFL55_gp07
subclass of: SO_0000673
so part of: AFL55_gp07
location: 8797..9580
location: region:8797-9580:1
so has part: feature:8797-9580:1:exon

YP_009160670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8797-9580:1:exon

AFL55_gt15
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt15
so part of: sequence
location: 9581..9653
location: region:9581-9653:1
so has part: feature:9581-9653:1:exon
subclass of: SO_0000663

25103316
type: Gene
SIO_000068: ncbigene

position:9581:1
position: 9581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9653:1
position: 9653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9581-9653:1:exon

AFL55_gt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt15
product: tRNA-Gly
SIO_010081: AFL55_gt15
subclass of: SO_0000673
so part of: AFL55_gt15
location: 9581..9653
location: region:9581-9653:1
so has part: feature:9581-9653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9581-9653:1:exon

AFL55_gp06
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: ND3
locus tag: AFL55_gp06
so part of: sequence
location: 9654..10002
location: region:9654-10002:1
so has part: feature:9654-10002:1:exon
subclass of: SO_0000010

25103340
type: Gene
SIO_000068: ncbigene

position:9654:1
position: 9654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10002:1
position: 10002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9654-10002:1:exon

AFL55_gp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: ND3
locus tag: AFL55_gp06
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:10002,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLIMITMLISTALSLILALVSFWLPQMNPDAEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGNQLPDPTLTLLWAATVLILLTLGLIYEWLQGGLEWAE
SIO_010081: AFL55_gp06
subclass of: SO_0000673
so part of: AFL55_gp06
location: 9654..10002
location: region:9654-10002:1
so has part: feature:9654-10002:1:exon

YP_009160671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9654-10002:1:exon

AFL55_gt16
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt16
so part of: sequence
location: 10003..10071
location: region:10003-10071:1
so has part: feature:10003-10071:1:exon
subclass of: SO_0000663

25103317
type: Gene
SIO_000068: ncbigene

position:10003:1
position: 10003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10071:1
position: 10071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10003-10071:1:exon

AFL55_gt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt16
product: tRNA-Arg
SIO_010081: AFL55_gt16
subclass of: SO_0000673
so part of: AFL55_gt16
location: 10003..10071
location: region:10003-10071:1
so has part: feature:10003-10071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10003-10071:1:exon

AFL55_gp05
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: ND4L
locus tag: AFL55_gp05
so part of: sequence
location: 10072..10368
location: region:10072-10368:1
so has part: feature:10072-10368:1:exon
subclass of: SO_0000010

25103341
type: Gene
SIO_000068: ncbigene

position:10072:1
position: 10072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10368:1
position: 10368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10072-10368:1:exon

AFL55_gp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: ND4L
locus tag: AFL55_gp05
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPIYFSFTSAFTLGLTGLAFHRTHLLSALLCLEGMMLSLFIALALWTFQLESTAFSASPILLLAFSACEAGAGLALLVATARTHGTDRLQSLNLLQC
SIO_010081: AFL55_gp05
subclass of: SO_0000673
so part of: AFL55_gp05
location: 10072..10368
location: region:10072-10368:1
so has part: feature:10072-10368:1:exon

YP_009160672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10072-10368:1:exon

AFL55_gp04
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: ND4
locus tag: AFL55_gp04
so part of: sequence
location: 10362..11742
location: region:10362-11742:1
so has part: feature:10362-11742:1:exon
subclass of: SO_0000010

25103318
type: Gene
SIO_000068: ncbigene

position:10362:1
position: 10362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11742:1
position: 11742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10362-11742:1:exon

AFL55_gp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: ND4
locus tag: AFL55_gp04
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11742,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKILIPTIMLFPTIWLSTPKWLWTITTLQSLLIALLSLHWINWATDTGWTFSNTYMGTDPLSTPLLVLTCWLLPLMILASQNHIKPEPINRQRTYITLLASLQTFLIMAFGATEIIMFYVMFEATLIPTLIIITRWGNQAERLNAGTYFLFYTLTGSLPLLVALLLLHHNTGSLSMLIIQYSHPLTLETWGDKIWWAGCLIAFLVKMPLYGVHLWLPKAHVEAPVAGSMVLAAILLKLGGYGMMRMMVILDPLSKDLVYPIIALALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALVLMIAHGLVSSALFCLANTTYERTHSRTMILARGLQIIFPLTATWWFISNLANLALPPLPNLMGELMIITAMFNWSPWTLILTGAGTLITAAYSLYMFLMTQRGPLPQHIINLQPFHTREHLLMTLHLLPVILLVTKPEIMWGWWY
SIO_010081: AFL55_gp04
subclass of: SO_0000673
so part of: AFL55_gp04
location: 10362..11742
location: region:10362-11742:1
so has part: feature:10362-11742:1:exon

YP_009160673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10362-11742:1:exon

AFL55_gt17
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt17
so part of: sequence
location: 11743..11812
location: region:11743-11812:1
so has part: feature:11743-11812:1:exon
subclass of: SO_0000663

25103319
type: Gene
SIO_000068: ncbigene

position:11743:1
position: 11743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11812:1
position: 11812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11743-11812:1:exon

AFL55_gt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt17
product: tRNA-His
SIO_010081: AFL55_gt17
subclass of: SO_0000673
so part of: AFL55_gt17
location: 11743..11812
location: region:11743-11812:1
so has part: feature:11743-11812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11743-11812:1:exon

AFL55_gt18
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt18
so part of: sequence
location: 11813..11878
location: region:11813-11878:1
so has part: feature:11813-11878:1:exon
subclass of: SO_0000663

25103342
type: Gene
SIO_000068: ncbigene

position:11813:1
position: 11813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11878:1
position: 11878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11813-11878:1:exon

AFL55_gt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt18
product: tRNA-Ser
codon recognized: AGY
SIO_010081: AFL55_gt18
subclass of: SO_0000673
so part of: AFL55_gt18
location: 11813..11878
location: region:11813-11878:1
so has part: feature:11813-11878:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11813-11878:1:exon

AFL55_gt19
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt19
so part of: sequence
location: 11881..11953
location: region:11881-11953:1
so has part: feature:11881-11953:1:exon
subclass of: SO_0000663

25103343
type: Gene
SIO_000068: ncbigene

position:11881:1
position: 11881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11953:1
position: 11953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11881-11953:1:exon

AFL55_gt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt19
product: tRNA-Leu
codon recognized: CUN
SIO_010081: AFL55_gt19
subclass of: SO_0000673
so part of: AFL55_gt19
location: 11881..11953
location: region:11881-11953:1
so has part: feature:11881-11953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11881-11953:1:exon

AFL55_gp03
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: ND5
locus tag: AFL55_gp03
so part of: sequence
location: 11954..13780
location: region:11954-13780:1
so has part: feature:11954-13780:1:exon
subclass of: SO_0000010

25103344
type: Gene
SIO_000068: ncbigene

position:11954:1
position: 11954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13780:1
position: 13780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11954-13780:1:exon

AFL55_gp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: ND5
locus tag: AFL55_gp03
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MMNIIMTSTLLLTLTILIWPLITTLTPKPVDQDWAVKHAKTAVSTAFFINLIPLIIFLDQGMESIITTWNWMNIMNFDINISFKFDHYSLIFTPIALYVTWSILEFASWYMHSDPYMNRFFKYLLLFLVAMVILVTANNLFQLFIGWEGVGIMSFLLIGWWHGRADANTAALQAVIYNRVGDVGLILAIAWNAMNLNSWEIPQIFMMSKDFNMTLPLLGLVLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLMENNQFILTLCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHKLMPFTSSCLTIGSLALTGMPFLTGFFSKDAIIEALNTSYLNAWALTLTLIATSFTAVYSLRVIFFVTMGSPRFLPLSPINENNKAVIAPIGRLAWGSIIAGLILTSNFLPSKTPIMTMPTSLKLAALIVTITGLIIALTLATATSKQIKITPTLILHNFSNMLGFFPPIIHRLMPKLNLTLGKQATKLDRQWLEMGPKGLHPMHNSLTAMFDNIDTNIIKIYLTFYLITTALTIALLSLI
SIO_010081: AFL55_gp03
subclass of: SO_0000673
so part of: AFL55_gp03
location: 11954..13780
location: region:11954-13780:1
so has part: feature:11954-13780:1:exon

YP_009160674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11954-13780:1:exon

AFL55_gp02
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: ND6
locus tag: AFL55_gp02
so part of: sequence
location: complement(13777..14295)
location: region:13777-14295:-1
so has part: feature:13777-14295:-1:exon
subclass of: SO_0000010

25103320
type: Gene
SIO_000068: ncbigene

position:13777:-1
position: 13777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14295:-1
position: 14295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13777-14295:-1:exon

AFL55_gp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: ND6
locus tag: AFL55_gp02
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MMYFLDLLLLCLVVGLVGVASNPAPYFAALGLAMAAGVGCGVLVGHGGSLVGLMLFLIYLGGMLVVFAYSAALAAEPFPETWGGGSVKVYVLVYLFGVGVAMCWFWGGYGGYWVVMDEFKEFFVVRGDVSGASLMYSAGGGLLIVCAWVLLLCLFVVLELTRGLSRGALRAV
SIO_010081: AFL55_gp02
subclass of: SO_0000673
so part of: AFL55_gp02
location: complement(13777..14295)
location: region:13777-14295:-1
so has part: feature:13777-14295:-1:exon

YP_009160675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13777-14295:-1:exon

AFL55_gt20
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt20
so part of: sequence
location: complement(14296..14364)
location: region:14296-14364:-1
so has part: feature:14296-14364:-1:exon
subclass of: SO_0000663

25103321
type: Gene
SIO_000068: ncbigene

position:14296:-1
position: 14296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14364:-1
position: 14364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14296-14364:-1:exon

AFL55_gt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt20
product: tRNA-Glu
SIO_010081: AFL55_gt20
subclass of: SO_0000673
so part of: AFL55_gt20
location: complement(14296..14364)
location: region:14296-14364:-1
so has part: feature:14296-14364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14296-14364:-1:exon

AFL55_gp01
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
gene: CYTB
locus tag: AFL55_gp01
so part of: sequence
location: 14366..15503
location: region:14366-15503:1
so has part: feature:14366-15503:1:exon
subclass of: SO_0000010

25103345
type: Gene
SIO_000068: ncbigene

position:14366:1
position: 14366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15503:1
position: 15503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14366-15503:1:exon

AFL55_gp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 13013
gene: CYTB
locus tag: AFL55_gp01
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15503,aa:TERM)
transl table: 2
product: cytochrome b
translation: MVTRKTHPLFKIVNDALIDLPAPSNISAWWNFGSLLLLCLGVQILTGLFLAMHYTSDISTAFSSVVHICRDVNYGWIIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDALVQWIWGGFSVDNATLTRFFAFHFLLPFTIIAATILHALFLHETGSNNPIGLNSDADKISFHPYFSYKDLLGFIILLTALASLSLFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHLSKQQGLTFRPLSQILFWTLVADVMILTWIGGMPVEHPFIIIGQIASILYFSLFLILNPLAAWLENKLLNLN
SIO_010081: AFL55_gp01
subclass of: SO_0000673
so part of: AFL55_gp01
location: 14366..15503
location: region:14366-15503:1
so has part: feature:14366-15503:1:exon

YP_009160676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14366-15503:1:exon

AFL55_gt21
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt21
so part of: sequence
location: 15504..15576
location: region:15504-15576:1
so has part: feature:15504-15576:1:exon
subclass of: SO_0000663

25103322
type: Gene
SIO_000068: ncbigene

position:15504:1
position: 15504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15576:1
position: 15576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15504-15576:1:exon

AFL55_gt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt21
product: tRNA-Thr
SIO_010081: AFL55_gt21
subclass of: SO_0000673
so part of: AFL55_gt21
location: 15504..15576
location: region:15504-15576:1
so has part: feature:15504-15576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15504-15576:1:exon

AFL55_gt22
type: Gene
subclass of: SO_0000704
RO_0002162: 13013
locus tag: AFL55_gt22
so part of: sequence
location: complement(15575..15644)
location: region:15575-15644:-1
so has part: feature:15575-15644:-1:exon
subclass of: SO_0000663

25103346
type: Gene
SIO_000068: ncbigene

position:15575:-1
position: 15575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15644:-1
position: 15644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15575-15644:-1:exon

AFL55_gt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 13013
locus tag: AFL55_gt22
product: tRNA-Pro
SIO_010081: AFL55_gt22
subclass of: SO_0000673
so part of: AFL55_gt22
location: complement(15575..15644)
location: region:15575-15644:-1
so has part: feature:15575-15644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15575-15644:-1:exon

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 13013
note: control region
so part of: sequence
location: 15645..16508
location: region:15645-16508:1
so has part: feature:15645-16508:1:region

position:15645:1
position: 15645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15645-16508:1:region