Human adenovirus A, complete genome.
type: Entry
definition: Human adenovirus A, complete genome.
sequence version: NC_001460.1
sequence date: 2020-12-20
sequence: sequence
division: VRL
label: NC_001460.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA485481
keyword: RefSeq
source: Human mastadenovirus A
organism: Human mastadenovirus A
taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus.
reference: 1
references: 8254750
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by Dr Andrew Davison\n(MRC Virology Unit, Glasgow, UK) and Dr Balazs Harrach (Veterinary\nMedical. The reference sequence was derived from X73487.\nACCURACY: No potential sequence errors are noted.\nCURATION:\n Proteins: A standard nomenclature has been applied so that\northologs have the same name. Functional information may have been\npropagated from other adenovirus species.\n Protein-coding regions: The initiation codon for each CDS is\nassigned with as much confidence as possible. CDSs presumably\ninherited from the last common ancestor of all adenoviruses are\nindicated as genus-common, and all other CDSs as genus-specific.\nCDSs that have paralogues in one or more genomes are listed as\nmembers of named families. The evolutionary history of E3 and E4 is\ncomplex, frequently involving generation or loss of paralogues in\nwhole or in part, accompanied by rapid sequence divergence. In E3,\nthis is evident in a set of tandemly arranged CDSs encoding\ntransmembrane proteins. All of these are listed as members of the\nMP family, regardless of whether sequence conservation is\ndetectable.\n Transcripts: In mastadenoviruses, transcription arises from\nthe early genes (E1A, E1B, E2A, E2B, E3 and E4), the intermediate\ngenes (IX and IVa2) and the late genes (L, U and E2A-L). Certain\ntranscriptional features are supported by experimental data for\nsome of these genes in a few adenoviruses (particularly human\nadenovirus C). All transcriptional features not marked as\nexperimentally supported are predictions made on the basis of\nconservation and relevance to CDS expression. The degree of\nconfidence in each prediction depends on the feature under\nconsideration. In primate adenoviruses, predictions for E3, E4 and\nthe 5'-regions of E2A and E2B are generally the least certain. In\nnon-primate mastadenoviruses, this trend is accentuated to the\ndegree that predictions for introns in E3 and E4 are not provided,\nand those for …

sequence
subclass of: SO_0000353
sequence length: 34125
topology: linear
so has quality: SO_0000987
location: 1..34125
location: region:1-34125:1
RO_0002162: 129875

NC_001460
type: RefSeq
SIO_000068: refseq

PRJNA485481
type: BioProject
SIO_000068: bioproject

1
title: Nucleotide sequence of human adenovirus type 12 DNA: comparative functional analysis
author: Sprengel, J.
author: Schmitz, B.
author: Heuss-Neitzel, D.
author: Zock, C.
author: Doerfler, W.
journal: J. Virol.
volume: 68
issue: 1
pages: 379-389
year: 1994
pubmed: 8254750

8254750
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (01-AUG-2000) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Sprengel, J.
journal: Submitted (21-JUN-1993) J. Sprengel, Institute of Genetics/Dept. Virology, Weyertal 121, 50931 Cologne 41, FRG

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34125:1
position: 34125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-34125:1:source
so part of: sequence
organism: Human mastadenovirus A
mol type: genomic DNA
strain: Huie
serotype: Human adenovirus 12
host: Homo sapiens
culture collection: ATCC:VR-863
acronym: HAdV-12
acronym: HAdV-A

129875
type: Taxonomy
SIO_000068: taxonomy

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 129875
standard name: ITR
rpt type: inverted
rpt type: terminal
so part of: sequence
location: 1..164
location: region:1-164:1
so has part: feature:1-164:1:region

position:164:1
position: 164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-164:1:region

HAdVAgp01
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: E1A
locus tag: HAdVAgp01
so part of: sequence
location: 415..1442
location: region:415-1442:1
so has part: feature:415-1442:1:exon
subclass of: SO_0000010

1460853
type: Gene
SIO_000068: ncbigene

position:415:1
position: 415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1442:1
position: 1442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415-1442:1:exon

HAdVAgp01
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: TATA_box
gene: E1A
locus tag: HAdVAgp01
SIO_010081: HAdVAgp01
subclass of: SO_0000673
so part of: HAdVAgp01
location: 415..420
location: region:415-420:1
so has part: feature:415-420:1:exon

position:420:1
position: 420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415-420:1:exon

HAdVAgp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E1A
locus tag: HAdVAgp01
function: gene regulation
function: cell cycle regulation
function: transformation
note: alternative splicing utilizing nonconserved sites may produce additional proteins; genus-specific
codon start: 1
product: control protein E1A
translation: MRTEMTPLVLSYQEADDILEHLVDNFFNEVPSDDDLYVPSLYELYDLDVESAGEDNNEQAVNEFFPESLILAASEGLFLPEPPVLSPVCEPIGGECMPQLHPEDMDLLCYEMGFPCSDSEDEQDENGMAHVSASAAAAAADREREEFQLDHPELPGHNCKSCEHHRNSTGNTDLMCSLCYLRAYNMFIYSPVSDNEPEPNSTLDGDERPSPPKLGSAVPEGVIKPVPQRVTGRRRCAVESILDLIQEEEREQTVPVDLSVKRPRCN
SIO_010081: HAdVAgp01
subclass of: SO_0000673
so part of: HAdVAgp01
location: join(503..1070,1145..1377)
location: region:503-1377:1
so has part: feature:503-1070:1:exon
so has part: feature:1145-1377:1:exon

NP_040910.2
type: Protein
SIO_000068: ncbiprotein

IPR003853
type: InterPro
SIO_000068: interpro

IPR014410
type: InterPro
SIO_000068: interpro

P03259
type: UniProt
SIO_000068: uniprot

position:503:1
position: 503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377:1
position: 1377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503-1070:1:exon

position:1070:1
position: 1070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1145-1377:1:exon

position:1145:1
position: 1145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HAdVAgp01
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E1A
locus tag: HAdVAgp01
SIO_010081: HAdVAgp01
subclass of: SO_0000673
so part of: HAdVAgp01
location: 1071..1144
location: region:1071-1144:1
so has part: feature:1071-1144:1:exon

position:1071:1
position: 1071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144:1
position: 1144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071-1144:1:exon

HAdVAgp01
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
gene: E1A
locus tag: HAdVAgp01
SIO_010081: HAdVAgp01
subclass of: SO_0000673
so part of: HAdVAgp01
location: 1398..1403
location: region:1398-1403:1
so has part: feature:1398-1403:1:exon

position:1398:1
position: 1398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403:1
position: 1403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398-1403:1:exon

HAdVAgp01
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
gene: E1A
locus tag: HAdVAgp01
SIO_010081: HAdVAgp01
subclass of: SO_0000673
so part of: HAdVAgp01
location: 1437..1442
location: region:1437-1442:1
so has part: feature:1437-1442:1:exon

position:1437:1
position: 1437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437-1442:1:exon

HAdVAgp02
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: E1B
locus tag: HAdVAgp02
so part of: sequence
location: 1499..3809
location: region:1499-3809:1
so has part: feature:1499-3809:1:exon
subclass of: SO_0000010

1460854
type: Gene
SIO_000068: ncbigene

position:1499:1
position: 1499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3809:1
position: 3809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1499-3809:1:exon

HAdVAgp02
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: TATA_box
gene: E1B
locus tag: HAdVAgp02
SIO_010081: HAdVAgp02
subclass of: SO_0000673
so part of: HAdVAgp02
location: 1499..1504
location: region:1499-1504:1
so has part: feature:1499-1504:1:exon

position:1504:1
position: 1504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1499-1504:1:exon

HAdVAgp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E1B
locus tag: HAdVAgp02
function: apoptosis
function: transformation
note: genus-specific
codon start: 1
product: control protein E1B 19K
translation: MELETVLQSFQSVRQLLQYTSKNTSGFWRYLFGSTLSKVVNRVKEDYREEFENILADCPGLLASLDLCYHLVFQEKVVRSLDFSSVGRTVASIAFLATILDKWSEKSHLSWDYMLDYMSMQLWRAWLKRRVCIYSLARPLTMPPLPTLQEEKEEERNPAVVEK
SIO_010081: HAdVAgp02
subclass of: SO_0000673
so part of: HAdVAgp02
location: 1542..2033
location: region:1542-2033:1
so has part: feature:1542-2033:1:exon

NP_040911.1
type: Protein
SIO_000068: ncbiprotein

IPR002475
type: InterPro
SIO_000068: interpro

IPR002924
type: InterPro
SIO_000068: interpro

P04492
type: UniProt
SIO_000068: uniprot

position:1542:1
position: 1542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033:1
position: 2033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1542-2033:1:exon

HAdVAgp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E1B
locus tag: HAdVAgp02
function: apoptosis
function: DNA damage response
function: RNA metabolism and transport
function: transformation
note: alternative splicing utilizing nonconserved sites may produce additional proteins; genus-specific
codon start: 1
product: control protein E1B 55K
translation: MEREIPPELGLHAGLHVNAAVEGMAEEEGLHLLAGAAFDHAAAADVARGEGGGAEPCGGGEVNMEQQVQEGHVLDSGEGPSCADDRDKQEKKESLKEAAVLSRLTVNLMSRPRLETVYWQELQDEFQRGDMHLQYKYSFEQLKTHWLEPWEDMECAIKAFAKLALRPDCSYRITKTVTITSCAYIIGNGAIVEVDTSDRVAFRCRMQGMGPGVVGLDGITFINVRFAGDKFKGIMFEANTCLVLHGVYFLNFSNICVESWNKVSARGCTFYGCWKGLVGRPKSKLSVKKCLFEKCVLALIVEGDAHIRHNAASENACFVLLKGMAILKHNMVCGVSDQTMRRFVTCADGNCHTLKTVHIVSHSRHCWPVCDHNMFMRCTIHLGLRRGMFRPSQCNFSHSNIMLEPEVFSRVCLNGVFDLSVELCKVIRYNDDTRHRCRQCECGSSHLELRPIVLNVTEELRSDHLTLSCLRTDYESSDEDDN
SIO_010081: HAdVAgp02
subclass of: SO_0000673
so part of: HAdVAgp02
location: 1847..3295
location: region:1847-3295:1
so has part: feature:1847-3295:1:exon

NP_040912.1
type: Protein
SIO_000068: ncbiprotein

IPR002612
type: InterPro
SIO_000068: interpro

IPR006717
type: InterPro
SIO_000068: interpro

P04491
type: UniProt
SIO_000068: uniprot

position:1847:1
position: 1847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295:1
position: 3295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1847-3295:1:exon

HAdVAgp03
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: IX
locus tag: HAdVAgp03
so part of: sequence
location: 3322..3809
location: region:3322-3809:1
so has part: feature:3322-3809:1:exon
subclass of: SO_0000010

1460846
type: Gene
SIO_000068: ncbigene

position:3322:1
position: 3322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3322-3809:1:exon

HAdVAgp03
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: TATA_box
gene: IX
locus tag: HAdVAgp03
SIO_010081: HAdVAgp03
subclass of: SO_0000673
so part of: HAdVAgp03
location: 3322..3327
location: region:3322-3327:1
so has part: feature:3322-3327:1:exon

position:3327:1
position: 3327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3322-3327:1:exon

HAdVAgp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: IX
locus tag: HAdVAgp03
function: capsid morphogenesis
note: genus-specific
codon start: 1
product: capsid protein IX
translation: MNGTTQNNAALFDGGVFSPYLTSRLPYWAGVRQNVVGSTVDGRPVAPANSSTLTYATIGPSPLDTAAAAAASAAASTARSMAADFSFYNHLASNAVTRTAVREDILTVMLAKLETLTAQLEELSQKVEELADATTHTPAQPVTQ
SIO_010081: HAdVAgp03
subclass of: SO_0000673
so part of: HAdVAgp03
location: 3374..3808
location: region:3374-3808:1
so has part: feature:3374-3808:1:exon

NP_040913.1
type: Protein
SIO_000068: ncbiprotein

P03284
type: GOA
SIO_000068: goa

IPR005641
type: InterPro
SIO_000068: interpro

P03284
type: UniProt
SIO_000068: uniprot

position:3374:1
position: 3374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3808:1
position: 3808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3374-3808:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
note: E1B, IX
so part of: sequence
location: 3804..3809
location: region:3804-3809:1
so has part: feature:3804-3809:1:region

position:3804:1
position: 3804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3804-3809:1:region

HAdVAgp05
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: E2B
locus tag: HAdVAgp05
so part of: sequence
location: complement(3843..25552)
location: region:3843-25552:-1
so has part: feature:3843-25552:-1:exon
subclass of: SO_0000010

1460849
type: Gene
SIO_000068: ncbigene

position:3843:-1
position: 3843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25552:-1
position: 25552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3843-25552:-1:exon

HAdVAgp04
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: IVa2
locus tag: HAdVAgp04
so part of: sequence
location: complement(3843..5471)
location: region:3843-5471:-1
so has part: feature:3843-5471:-1:exon
subclass of: SO_0000010

1460856
type: Gene
SIO_000068: ncbigene

position:5471:-1
position: 5471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3843-5471:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
note: IVa2, E2B
so part of: sequence
location: complement(3843..3848)
location: region:3843-3848:-1
so has part: feature:3843-3848:-1:region

position:3848:-1
position: 3848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3843-3848:-1:region

HAdVAgp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: IVa2
locus tag: HAdVAgp04
function: gene regulation
function: DNA encapsidation
function: capsid morphogenesis
note: putative ATPase; genus-common
codon start: 1
product: encapsidation protein IVa2
translation: MLPCRSTGRRHALQHQPPQFKAHTGQRSTRSASIHRDRNNPDAHITSLEGQNPRPFGCSPPRSLQQQPAKPPQRGSLLDRDGIENITELWDRLQLLKQTLDHMPMADGLKPLKNFKSLQELLSLGGERLLGELAKQNIRVRQMMNEVAPLLHEDGSCTSLNYHLQPVIGVIYGPTGCGKSQLLRNLLSAQLVTPAPETVFFIVPQVDMIPPSEIKSWEMQICEGNYVPGPEGTIIPQSGTLCPKFVKLSYDDLTLDHNYDVSDPENIFAQAAARGPIAIIMDECMENLGSHKGVSKFFHAFPSKLHDKFPKCTGYTVFVVLHNMNPRRDLAGNIANLKIQSKLHIMSPRMHPTQLNRFINTYTKGLPLAISLLLKDIFNHHAQRCCYDWIIYNTNPEHEALQWSYLHPKDGLMPMYLNIQAHLYKILEHIHRVLNDRERWSRAYHVRKNKYQ
SIO_010081: HAdVAgp04
subclass of: SO_0000673
so part of: HAdVAgp04
location: complement(3844..5202)
location: region:3844-5202:-1
so has part: feature:3844-5202:-1:exon

NP_040914.1
type: Protein
SIO_000068: ncbiprotein

IPR003389
type: InterPro
SIO_000068: interpro

P12540
type: UniProt
SIO_000068: uniprot

position:3844:-1
position: 3844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5202:-1
position: 5202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3844-5202:-1:exon

HAdVAgp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E2B
locus tag: HAdVAgp05
EC number: 2.7.7.7
function: DNA replication
note: pol; genus-common
codon start: 1
product: DNA polymerase
translation: MALVQNNRAGSVYTTPTDSRYQSPGSRPCQSTSGSTPSPARASGRHTASPASRRTRTAASSGSSSAPPILSRRIGKVHRGTVVSPRAHGILHAIDSANGTPLEIKYYLHLQPALTRLCEVNLRAVPADMLFSLTDTMDSSRLYALISRFRPSRAEIWTCRSRGTVTLSVLAFEDPNGSGNAAEEEEDERQLPSGIDFPICFLVRGRQVHLIQQIQPVQRCEHCARFYKHQHECSVRRRDFYFHHINSHSSNWWQEIHFFPIGSHPRTERLFITYDVETYTWMGAFGKQLVPFMLVMKLSGDDNLVKHALQLALELGWDQWEKDSTTFYCLTPEKMKVGQQFRTYRNRLQTSLATDLWMTFLQKNPHLSQWAQEENGLVALEDLSYEDLKRAPAIKGEPRFVELYIVGHNINGFDEIVLAAQVINNRLDVPGPFKISRNFIPRAGKILFNDITFALPNPHYKKRTNFLLWEHGGCDDQDFKYQYLKVMVRDTFALTHTSLRKAAQAYALPVEKGCCPYKAVNQFYMLGSYRADANGFPLEEYWKDKEEYLLNQELWKKKGEKNYNLIGETLNYCALDVLVTASLVEKLRSSYAQFVTDAVGLDAAHFNVFQRPTISSNSHAIFRQILYRAEKPQRTHLGPNILAPSHELYDYVRASIRGGRCYPTYIGVLKEPIYVYDICGMYASALTHPMPWGPPLNPYERALAVRQWQVALENYTCKIDYFDKNLCPGIFTIDADPPDENQLDVLPPFCSRKGGRLAWTNESLRGEVVTSVDLVTLHNRGWRLRLLSDERTTIFPTWKCLAREYVQLNIAAKERADRDKNQTLRSIAKLLSNALYGSFATKLDNKKIVFSDQMEESLMKEIAAGRLNIKSSSFIETDTLSTEVMPAFERVYSPNQLALVNSEAEESDEDQGPAPFYSPPPENCEHVTYTYKPITFMDAEEGDMCLHTLESSNPLINNDRYPSHVASFVLAWTRAFVSEWSEFLYEEDRGIPLKDRPLKSVYGDTDSLFVTEKGRRLMESQGKKRIKKYGGKLVFDPSCPELTWSVECETVCSYCGADAYSPESVFLAPKLYALKCLQCPHCGSTSKGKIRAKGHATEALSYDLMLKCYLAEAQGEDTRFSTSRLSLKRTLASAQPGAHPFTVTETTLTRTLRPWKDKTLVHLDAHRLVPYSNSQPNPRNEEVCWIEMA
SIO_010081: HAdVAgp05
subclass of: SO_0000673
so part of: HAdVAgp05
location: complement(join(4953..8513,13340..13348))
location: region:4953-13348:-1
so has part: feature:13340-13348:-1:exon
so has part: feature:4953-8513:-1:exon

NP_040915.2
type: Protein
SIO_000068: ncbiprotein

P06538
type: GOA
SIO_000068: goa

IPR004868
type: InterPro
SIO_000068: interpro

IPR006134
type: InterPro
SIO_000068: interpro

IPR006172
type: InterPro
SIO_000068: interpro

IPR014382
type: InterPro
SIO_000068: interpro

P06538
type: UniProt
SIO_000068: uniprot

position:4953:-1
position: 4953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13348:-1
position: 13348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13340-13348:-1:exon

position:13340:-1
position: 13340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4953-8513:-1:exon

position:8513:-1
position: 8513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAdVAgp04
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: IVa2
locus tag: HAdVAgp04
SIO_010081: HAdVAgp04
subclass of: SO_0000673
so part of: HAdVAgp04
location: complement(5181..5458)
location: region:5181-5458:-1
so has part: feature:5181-5458:-1:exon

position:5181:-1
position: 5181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5458:-1
position: 5458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5181-5458:-1:exon

HAdVAgp06
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: L5
locus tag: HAdVAgp06
so part of: sequence
location: 5771..31132
location: region:5771-31132:1
so has part: feature:5771-31132:1:exon
subclass of: SO_0000010

1460847
type: Gene
SIO_000068: ncbigene

position:5771:1
position: 5771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31132:1
position: 31132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5771-31132:1:exon

HAdVAgp07
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: L4
locus tag: HAdVAgp07
so part of: sequence
location: 5771..29195
location: region:5771-29195:1
so has part: feature:5771-29195:1:exon
subclass of: SO_0000010

1460842
type: Gene
SIO_000068: ncbigene

position:29195:1
position: 29195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5771-29195:1:exon

HAdVAgp08
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: L3
locus tag: HAdVAgp08
so part of: sequence
location: 5771..21172
location: region:5771-21172:1
so has part: feature:5771-21172:1:exon
subclass of: SO_0000010

1460858
type: Gene
SIO_000068: ncbigene

position:21172:1
position: 21172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5771-21172:1:exon

HAdVAgp09
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: L2
locus tag: HAdVAgp09
so part of: sequence
location: 5771..16797
location: region:5771-16797:1
so has part: feature:5771-16797:1:exon
subclass of: SO_0000010

1460868
type: Gene
SIO_000068: ncbigene

position:16797:1
position: 16797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5771-16797:1:exon

HAdVAgp10
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: L1
locus tag: HAdVAgp10
so part of: sequence
location: 5771..13328
location: region:5771-13328:1
so has part: feature:5771-13328:1:exon
subclass of: SO_0000010

1460848
type: Gene
SIO_000068: ncbigene

position:13328:1
position: 13328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5771-13328:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: TATA_box
note: L
so part of: sequence
location: 5771..5776
location: region:5771-5776:1
so has part: feature:5771-5776:1:region

position:5776:1
position: 5776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5771-5776:1:region

intron
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
note: between L1 and L2 leaders
so part of: sequence
location: 5843..6863
location: region:5843-6863:1
so has part: feature:5843-6863:1:region

position:5843:1
position: 5843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6863:1
position: 6863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5843-6863:1:region

intron
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
note: between L2 and L3 leaders
so part of: sequence
location: 6936..9369
location: region:6936-9369:1
so has part: feature:6936-9369:1:region

position:6936:1
position: 6936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9369:1
position: 9369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6936-9369:1:region

intron
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
note: between L2 and i leaders; precedes protein 13.6K CDS
so part of: sequence
location: 6936..7704
location: region:6936-7704:1
so has part: feature:6936-7704:1:region

position:7704:1
position: 7704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6936-7704:1:region

HAdVAgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L1
locus tag: HAdVAgp10
function: possibly RNA metabolism and transport
note: i-leader protein; similar CDSs are present in some other human mastadenoviruses, but their conservation may merely be a secondary effect of conservation of DNA polymerase encoded on the opposing strand; genus-specific
codon start: 1
product: protein 13.6K
translation: MRTDWEKVDLLPPVGRMAVDVMKVEISSADRAFMLMFVKACAVFASLHGLYLLNEVYLAASHQKADGKINTTWQLPFVLFLFCCIATTVWILESENGEGDGAPRPACPDFSTRGAETGNQGVQPGAVHGISQREKHELRARS
SIO_010081: HAdVAgp10
subclass of: SO_0000673
so part of: HAdVAgp10
location: join(7731..8138,9370..9390)
location: region:7731-9390:1
so has part: feature:7731-8138:1:exon
so has part: feature:9370-9390:1:exon

NP_040916.2
type: Protein
SIO_000068: ncbiprotein

P36704
type: UniProt
SIO_000068: uniprot

position:7731:1
position: 7731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9390:1
position: 9390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7731-8138:1:exon

position:8138:1
position: 8138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9370-9390:1:exon

position:9370:1
position: 9370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HAdVAgp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E2B
locus tag: HAdVAgp05
function: DNA replication
note: covalently attached to genome 5'-termini; genus-common
codon start: 1
product: terminal protein precursor pTP
translation: MALSIQDCARLTGQSVATIERFLPLRNIWNRAREFMRATTTAAGITWMSRYIYEYHRLMLEDLAPGAAATLGWPLYREPPPHFLVGYQYLVRTCNDYVFDSRAYSRLRYTETVQPGTQTVNWSVMTNCSYTINAGAYHRFVDVDDFATTLTQIQQAVLAERVVADLALLQPLQGYGSTHMADRGNREVEVERLMQDYYKDLGRCQSDVWGMADRLRIQQAGPKDVVLLKTIRGLKTAYFNYIISSIAQLPGTLEETKLSLPCDCDWLDAFLERFSDPVDMQTLSSLRGVPTQQIIKCIISAVSLPNAPRNASFPILHETELRGGVFELRPRENGRAVTETMRRRRGEMIERFVDRLPVRRRRRRQPPPPVVEEEIMEVEEEEQEIVPGAFQQEVRETVAELIRLLEEELTVAARNSQFFNFAVDFYEAMERLEALGDINELTLRRWILYFFVSEHVATTLNYLFQRLRNYGVFARLVELNLAQVVMRARDSEGGVVYSRVWNEIGLNAFSQLMSRISNDLAATIERAGHGDLQEEEIDQLMAEIAYQDNSGDVQEILRQAAVNDTEIDSVELSFRFKTTGPVVFTQRRQIQDINRRVVAHASQLRAQHLPLPERQADIPLPPLPAGPEPPLPPGARPRRRF
SIO_010081: HAdVAgp05
subclass of: SO_0000673
so part of: HAdVAgp05
location: complement(join(8312..10228,13340..13348))
location: region:8312-13348:-1
so has part: feature:13340-13348:-1:exon
so has part: feature:8312-10228:-1:exon

NP_040917.2
type: Protein
SIO_000068: ncbiprotein

P12541
type: GOA
SIO_000068: goa

IPR003391
type: InterPro
SIO_000068: interpro

P12541
type: UniProt
SIO_000068: uniprot

position:8312:-1
position: 8312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13340-13348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8312-10228:-1:exon

position:10228:-1
position: 10228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAdVAgp05
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E2B
locus tag: HAdVAgp05
SIO_010081: HAdVAgp05
subclass of: SO_0000673
so part of: HAdVAgp05
location: complement(8514..13339)
location: region:8514-13339:-1
so has part: feature:8514-13339:-1:exon

position:8514:-1
position: 8514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13339:-1
position: 13339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8514-13339:-1:exon

HAdVAgp06
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L5
locus tag: HAdVAgp06
note: precedes fiber CDS
SIO_010081: HAdVAgp06
subclass of: SO_0000673
so part of: HAdVAgp06
location: 9457..29367
location: region:9457-29367:1
so has part: feature:9457-29367:1:exon

position:9457:1
position: 9457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29367:1
position: 29367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-29367:1:exon

HAdVAgp07
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L4
locus tag: HAdVAgp07
note: precedes capsid protein precursor pVIII CDS
SIO_010081: HAdVAgp07
subclass of: SO_0000673
so part of: HAdVAgp07
location: 9457..25586
location: region:9457-25586:1
so has part: feature:9457-25586:1:exon

position:25586:1
position: 25586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-25586:1:exon

HAdVAgp07
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L4
locus tag: HAdVAgp07
note: precedes protein 33K and encapsidation protein 22K CDSs
SIO_010081: HAdVAgp07
subclass of: SO_0000673
so part of: HAdVAgp07
location: 9457..24761
location: region:9457-24761:1
so has part: feature:9457-24761:1:exon

position:24761:1
position: 24761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-24761:1:exon

HAdVAgp07
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L4
locus tag: HAdVAgp07
note: precedes hexon assembly protein 100K CDS
SIO_010081: HAdVAgp07
subclass of: SO_0000673
so part of: HAdVAgp07
location: 9457..22682
location: region:9457-22682:1
so has part: feature:9457-22682:1:exon

position:22682:1
position: 22682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-22682:1:exon

HAdVAgp08
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L3
locus tag: HAdVAgp08
note: precedes protease CDS
SIO_010081: HAdVAgp08
subclass of: SO_0000673
so part of: HAdVAgp08
location: 9457..20515
location: region:9457-20515:1
so has part: feature:9457-20515:1:exon

position:20515:1
position: 20515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-20515:1:exon

HAdVAgp08
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L3
locus tag: HAdVAgp08
note: precedes hexon CDS
SIO_010081: HAdVAgp08
subclass of: SO_0000673
so part of: HAdVAgp08
location: 9457..17697
location: region:9457-17697:1
so has part: feature:9457-17697:1:exon

position:17697:1
position: 17697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-17697:1:exon

HAdVAgp08
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L3
locus tag: HAdVAgp08
note: precedes capsid protein precursor pVI CDS
SIO_010081: HAdVAgp08
subclass of: SO_0000673
so part of: HAdVAgp08
location: 9457..16837
location: region:9457-16837:1
so has part: feature:9457-16837:1:exon

position:16837:1
position: 16837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-16837:1:exon

HAdVAgp09
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L2
locus tag: HAdVAgp09
note: precedes core protein precursor pX CDS
SIO_010081: HAdVAgp09
subclass of: SO_0000673
so part of: HAdVAgp09
location: 9457..16567
location: region:9457-16567:1
so has part: feature:9457-16567:1:exon

position:16567:1
position: 16567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-16567:1:exon

HAdVAgp09
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L2
locus tag: HAdVAgp09
note: precedes core protein V CDS
SIO_010081: HAdVAgp09
subclass of: SO_0000673
so part of: HAdVAgp09
location: 9457..15507
location: region:9457-15507:1
so has part: feature:9457-15507:1:exon

position:15507:1
position: 15507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-15507:1:exon

HAdVAgp09
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L2
locus tag: HAdVAgp09
note: precedes core protein precursor pVII CDS
SIO_010081: HAdVAgp09
subclass of: SO_0000673
so part of: HAdVAgp09
location: 9457..14874
location: region:9457-14874:1
so has part: feature:9457-14874:1:exon

position:14874:1
position: 14874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-14874:1:exon

HAdVAgp09
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L2
locus tag: HAdVAgp09
note: precedes penton base CDS
SIO_010081: HAdVAgp09
subclass of: SO_0000673
so part of: HAdVAgp09
location: 9457..13386
location: region:9457-13386:1
so has part: feature:9457-13386:1:exon

position:13386:1
position: 13386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-13386:1:exon

HAdVAgp10
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L1
locus tag: HAdVAgp10
note: precedes capsid protein precursor pIIIa CDS
SIO_010081: HAdVAgp10
subclass of: SO_0000673
so part of: HAdVAgp10
location: 9457..11569
location: region:9457-11569:1
so has part: feature:9457-11569:1:exon

position:11569:1
position: 11569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-11569:1:exon

HAdVAgp10
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L1
locus tag: HAdVAgp10
note: precedes encapsidation protein 52K CDS
SIO_010081: HAdVAgp10
subclass of: SO_0000673
so part of: HAdVAgp10
location: 9457..10427
location: region:9457-10427:1
so has part: feature:9457-10427:1:exon

position:10427:1
position: 10427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9457-10427:1:exon

HAdVAgp05
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E2B
locus tag: HAdVAgp05
SIO_010081: HAdVAgp05
subclass of: SO_0000673
so part of: HAdVAgp05
location: complement(10229..13339)
location: region:10229-13339:-1
so has part: feature:10229-13339:-1:exon

position:10229:-1
position: 10229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10229-13339:-1:exon

HAdVAgp11
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: VAI
locus tag: HAdVAgp11
so part of: sequence
location: 10260..10400
location: region:10260-10400:1
so has part: feature:10260-10400:1:exon

1460841
type: Gene
SIO_000068: ncbigene

position:10260:1
position: 10260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10400:1
position: 10400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10260-10400:1:exon

HAdVAgp11
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 129875
gene: VAI
locus tag: HAdVAgp11
product: virus-associated RNA I
SIO_010081: HAdVAgp11
so part of: HAdVAgp11
location: 10260..10400
location: region:10260-10400:1
so has part: feature:10260-10400:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10260-10400:1:exon

HAdVAgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L1
locus tag: HAdVAgp10
function: DNA encapsidation
function: capsid morphogenesis
note: genus-common
codon start: 1
product: encapsidation protein 52K
translation: MHPVLRQMRPQPRATTASAAVALSGSGEQEEPQCPTLELEEGEGIARLGAHSPERHPRVQLARDSRVAFVPRQNMFRDNSGEEAEEMRDCRFRAGRELRRGFNRERLLREEDFEPDEHSGISSARAHVSAANLVTAYEQTVTEERNFQKSFNNHVRTLIAREEVAIGLMHLWDFVEAYVHNPASKPLTAQLFLIVQHSRDNETFRDAMLNIAEPQGRWLLDLINILQSIVVQERSLSLADKVAAINYSMLSLGKFYARKIYKSPYVPIDKEVKIDSFYMRMALKVLTLSDDLGVYRNDRIHKAVSASRRRELSDKELMHSLQRALTGAGTEDESFFDMGADLRWQPSARALEAAGVASADVTGDDDDEDQYED
SIO_010081: HAdVAgp10
subclass of: SO_0000673
so part of: HAdVAgp10
location: 10428..11549
location: region:10428-11549:1
so has part: feature:10428-11549:1:exon

NP_040918.1
type: Protein
SIO_000068: ncbiprotein

P36715
type: GOA
SIO_000068: goa

IPR004292
type: InterPro
SIO_000068: interpro

P36715
type: UniProt
SIO_000068: uniprot

position:10428:1
position: 10428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11549:1
position: 11549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10428-11549:1:exon

HAdVAgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L1
locus tag: HAdVAgp10
function: capsid morphogenesis
note: genus-common
codon start: 1
product: capsid protein precursor pIIIa
translation: MQRPAIIAERAPNLDPAVLAAMQSQPSGVTASDDWTAAMDRIMALTARSPDAFRQQPQANRFSAILEAVVPSRTNPTHEKVLTIVNALLDSKAIRKDEAGLIYNALLERVARYNSTNVQANLDRMGTDVKEALAQRERFHRDGNLGSLVALNAFLSTQPANVPRGQEDYTNFISALRLMVTEVPQSEVYQSGPDYFFQTSRQGLQTVNLTQAFKNLQGLWGVRAPVGDRSTLSSLLTPNSRLLLLLIAPFTNTNSLSRDSYLGHLVTLYREAIGQAQVDEQTYQEITSVSRALGQEDTGSLEATLNFLLTNRRQQVPPQYTLNAEEERILRYVQQSVSLYLMREGATPSAALDMTARNMEPSFYASNRAFINRLMDYLHRAAAMNGEYFTNAILNPHWLPPPGFYTGEFDLPEGNDGFLWDDVTDSLFSPAVIGHHGKKEAGDEGPLLDSRASSPFPSLTSLPASVNSGRTTRPRLTGESEYLNDPILFPVRDKNFPNNGIESLVDKMSRWKTYAQERREWEERQPRPVRPPRQRWQRRKKGAHAGDEGSDDSADDSSVLDLGGSGNPFAHLRPQGCIGSLY
SIO_010081: HAdVAgp10
subclass of: SO_0000673
so part of: HAdVAgp10
location: 11570..13318
location: region:11570-13318:1
so has part: feature:11570-13318:1:exon

NP_040919.1
type: Protein
SIO_000068: ncbiprotein

P36712
type: GOA
SIO_000068: goa

IPR003479
type: InterPro
SIO_000068: interpro

P36712
type: UniProt
SIO_000068: uniprot

position:11570:1
position: 11570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13318:1
position: 13318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11570-13318:1:exon

HAdVAgp10
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
gene: L1
locus tag: HAdVAgp10
SIO_010081: HAdVAgp10
subclass of: SO_0000673
so part of: HAdVAgp10
location: 13323..13328
location: region:13323-13328:1
so has part: feature:13323-13328:1:exon

position:13323:1
position: 13323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13323-13328:1:exon

HAdVAgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L2
locus tag: HAdVAgp09
function: capsid morphogenesis
function: cell attachment
function: cell entry
note: capsid protein III; genus-common
codon start: 1
product: penton base
translation: MRRAVELQTVAFPETPPPSYETVMAAAPPYVPPRYLGPTEGRNSIRYSELSPLYDTTRVYLVDNKSSDIASLNYQNDHSNFLTTVVQNNDYSPIEAGTQTINFDERSRWGGDLKTILHTNMPNVNDFMFTTKFKARVMVARKTNNEGQTILEYEWAEFVLPEGNYSETMTIDLMNNAIIEHYLRVGRQHGVLESDIGVKFDTRNFRLGWDPETQLVTPGVYTNEAFHPDIVLLPGCGVDFTESRLSNILGIRKRQPFQEGFVIMYEHLEGGNIPALLDVKKYENSLQDQNTVRGDNFIALNKAARIEPVETDPKGRSYNLLPDKKNTKYRSWYLAYNYGDPEKGVRSWTLLTTPDVTGGSEQVYWSLPDMMQDPVTFRSSRQVSNYPVVAAELLPVHAKSFYNEQAVYSQLIRQSTALTRVFNRFPENQILVRPPAATITTVSENVPALTDHGTLPLRSSISGVQRVTITDARRRTCPYVYKALGIVSPRVLSSRTF
SIO_010081: HAdVAgp09
subclass of: SO_0000673
so part of: HAdVAgp09
location: 13394..14887
location: region:13394-14887:1
so has part: feature:13394-14887:1:exon

NP_040920.1
type: Protein
SIO_000068: ncbiprotein

P36716
type: GOA
SIO_000068: goa

IPR002605
type: InterPro
SIO_000068: interpro

P36716
type: UniProt
SIO_000068: uniprot

position:13394:1
position: 13394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14887:1
position: 14887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13394-14887:1:exon

HAdVAgp05
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E2B
locus tag: HAdVAgp05
note: precedes DNA polymerase and terminal protein precursor pTP CDSs
SIO_010081: HAdVAgp05
subclass of: SO_0000673
so part of: HAdVAgp05
location: complement(13506..25455)
location: region:13506-25455:-1
so has part: feature:13506-25455:-1:exon

position:13506:-1
position: 13506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25455:-1
position: 25455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13506-25455:-1:exon

HAdVAgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L2
locus tag: HAdVAgp09
function: capsid morphogenesis
note: genus-common
codon start: 1
product: core protein precursor pVII
translation: MSILVSPSNNTGWGLGAARMYGGAKTRSSQHPVRVRGHYRAPWGAHTRGRTGRTTVDDVIDSVVADARKYRAPAETAGSTVDAVIDEVVANARAYARRRRRLRRRRRPTTAMRAARALVRRARRIGRRAMMRAARRAATPAGRARRRAAAAAATAIANLAAPRRGNVYWVRDSVTGTRVPVRTRPPHP
SIO_010081: HAdVAgp09
subclass of: SO_0000673
so part of: HAdVAgp09
location: 14902..15468
location: region:14902-15468:1
so has part: feature:14902-15468:1:exon

YP_002640218.1
type: Protein
SIO_000068: ncbiprotein

position:14902:1
position: 14902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15468:1
position: 15468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14902-15468:1:exon

HAdVAgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L2
locus tag: HAdVAgp09
function: capsid morphogenesis
note: genus-specific
codon start: 1
product: core protein V
translation: MTKRKFKEELLQALAPEIYGPSDNLTKRDIKHVKKREKKEEEVAAASADGVEFVRSFAPRRRVQWKGRQVKRILRPGTTVVFSPGERTIMRPLKREYDEVYADDDILEQAAQQTGEFAYGKKGRYGDKIAIPLDEGNPTPSLKAVTLQQVLPVLGPSEEKRGIKREAMDELQPTMQLMVPKRQKLEDVLEHMKVDPSVQPDVKVRPIKKVAPGLGVQTVDIQIPVQTALGETMEIQTSPIKTTVNASVQTDPWYPPVLSTKKKRHYRQTSSLLPDYVLHPSIVPTPGYRGTTFQRRATAPSRRRGPSRRRRRRKATLAPAAVRRVVQRGRTLILPSVRYHPSIL
SIO_010081: HAdVAgp09
subclass of: SO_0000673
so part of: HAdVAgp09
location: 15509..16543
location: region:15509-16543:1
so has part: feature:15509-16543:1:exon

NP_040921.2
type: Protein
SIO_000068: ncbiprotein

P36717
type: GOA
SIO_000068: goa

IPR005608
type: InterPro
SIO_000068: interpro

P36717
type: UniProt
SIO_000068: uniprot

position:15509:1
position: 15509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16543:1
position: 16543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15509-16543:1:exon

HAdVAgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L2
locus tag: HAdVAgp09
function: capsid morphogenesis
note: putative type 2 membrane protein; product Mu; genus-common
codon start: 1
product: core protein precursor pX
translation: MALTCRMRIPIPGYRGRPRRRKGLTGNGRFRRRSMRRRMKGGVLPFLIPLIAAAIGAVPGIASVALQASRKN
SIO_010081: HAdVAgp09
subclass of: SO_0000673
so part of: HAdVAgp09
location: 16568..16786
location: region:16568-16786:1
so has part: feature:16568-16786:1:exon

NP_040922.1
type: Protein
SIO_000068: ncbiprotein

IPR008393
type: InterPro
SIO_000068: interpro

P35986
type: UniProt
SIO_000068: uniprot

position:16568:1
position: 16568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16786:1
position: 16786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16568-16786:1:exon

HAdVAgp09
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
gene: L2
locus tag: HAdVAgp09
SIO_010081: HAdVAgp09
subclass of: SO_0000673
so part of: HAdVAgp09
location: 16787..16792
location: region:16787-16792:1
so has part: feature:16787-16792:1:exon

position:16787:1
position: 16787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16792:1
position: 16792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16787-16792:1:exon

HAdVAgp09
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
gene: L2
locus tag: HAdVAgp09
SIO_010081: HAdVAgp09
subclass of: SO_0000673
so part of: HAdVAgp09
location: 16792..16797
location: region:16792-16797:1
so has part: feature:16792-16797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16792-16797:1:exon

HAdVAgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L3
locus tag: HAdVAgp08
function: capsid morphogenesis
note: cleaved peptide stimulates protease; genus-common
codon start: 1
product: capsid protein precursor pVI
translation: MEDINFSSLAPRHGTRPYMGTWNEIGTSQLNGGAFNWNSIWSGLKNFGSTIKTYGTKAWNSQTGQMLRDKLKDQNFQQKVVDGLASGINGVVDIANQAVQKKIANRLEPRPDEVMVEEKLPPLETVPGSVPTKGEKRPRPDAEETLVTHTTEPPSYEEAIKQGAALSPTTYPMTKPILPMATRVYGKNENVPMTLELPPLPEPTIADPVGSVPVASVPVASTVSRPAVRPVAVASLRNPRSSNWQSTLNSIVGLGVKSLKRRRCY
SIO_010081: HAdVAgp08
subclass of: SO_0000673
so part of: HAdVAgp08
location: 16843..17640
location: region:16843-17640:1
so has part: feature:16843-17640:1:exon

NP_040923.1
type: Protein
SIO_000068: ncbiprotein

P35988
type: GOA
SIO_000068: goa

IPR004243
type: InterPro
SIO_000068: interpro

P35988
type: UniProt
SIO_000068: uniprot

position:16843:1
position: 16843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17640:1
position: 17640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16843-17640:1:exon

HAdVAgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L3
locus tag: HAdVAgp08
function: capsid morphogenesis
note: capsid protein II; genus-common
codon start: 1
product: hexon
translation: MATPSMMPQWSYMHIAGQDASEYLSPGLVQFARATDTYFTLGNKFRNPTVAPTHDVTTDRSQRLTLRFVPVDREDTTYSYKARFTLAVGDNRVLDMASSYFDIRGVLDRGPSFKPYSGTAYNSLAPKGAPNASQWSDNAKLNTFAQAPYLSDTITAADGIKVGTDTAQAGAAVYANKTYQPEPQVGPSEWNTSIENVKAGGRALKQTTAMQPCYGSYARPTNEHGGQSKDDNIELKFFDSANNAANTAQVVFYTEDVNLEMPDTHLVFKPTVTNGTIASESLLGQQAAPNRANYIAFRDNFIGLMYYNSTGNMGVLAGQASQLNAVVDLQDRNTELSYQLMLDALGDRTRYFSLWNSAVDSYDPDVRVIENHGVEDELPNYCFPLSAVGEIKNYKGIKPDNGGGGGWTADNTVSEANHIGIGNIAAMEINLQANLWRSFLYSNVGLYLPDDLKYTPGNIKLPDNKNTYEYMNGRVTAPGLVDTYVNIGARWSPDVMDNVNPFNHHRNAGLRYRSMLLGNGRFVPFHIQVPQKFFAIRNLLLLPGSYTYEWNFRKDVNMILQSTLGNDLRVDGASVRFDNIALYANFFPMAHNTASTLEAMLRNDTNDQSFNDYLCAANMLYPIPANATSVPISIPSRNWAAFRGWSFTRLKTKETPSLGSGFDPYFVYSGTIPYLDGTFYLNHTFKKVSIMFDSSVSWPGNDRLLTPNEFEIKRSVDGEGYNVAQCNMTKDWFLIQMLSHYNIGYQGFYIPESYKDRMYSFFRNFQPMSRQVVDTTEYKNYKKVTVEFQHNNSGFVGYLGPTMREGQAYPANYPYPLIGQTAVESITQKKFLCDRVMWRIPFSSNFMSMGALTDLGQNMLYANSAHALDMTFEVDPMDEPTLLYVLFEVFDVVRIHQPHRGVIEAVYLRTPFSAGNATT
SIO_010081: HAdVAgp08
subclass of: SO_0000673
so part of: HAdVAgp08
location: 17740..20499
location: region:17740-20499:1
so has part: feature:17740-20499:1:exon

NP_040924.1
type: Protein
SIO_000068: ncbiprotein

P19900
type: GOA
SIO_000068: goa

P03277
type: HSSP
SIO_000068: hssp

IPR016107
type: InterPro
SIO_000068: interpro

IPR016108
type: InterPro
SIO_000068: interpro

IPR016110
type: InterPro
SIO_000068: interpro

IPR016111
type: InterPro
SIO_000068: interpro

P19900
type: UniProt
SIO_000068: uniprot

position:17740:1
position: 17740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20499:1
position: 20499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17740-20499:1:exon

HAdVAgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L3
locus tag: HAdVAgp08
EC number: 3.4.22.39
function: capsid morphogenesis
note: capsid protein 23K; genus-common
codon start: 1
product: protease
translation: MGSSEQELTAIVRDLGCGPYFLGTFDKRFPGFVSRDRLSCAIVNTAGRETGGVHWLAFGWNPKSHTCYLFDPFGFSDQRLKQIYQFEYESLLRRSALAATKDRCVTLEKSTQTVQGPFSAACGLFCCMFLHAFTHWPDHPMDKNPTMDLLTGVPNCMLQSPQVVGTLQRNQNELYKFLNNLSPYFRHNRERIEKATSFTKMQNGLK
SIO_010081: HAdVAgp08
subclass of: SO_0000673
so part of: HAdVAgp08
location: 20525..21145
location: region:20525-21145:1
so has part: feature:20525-21145:1:exon

NP_040925.1
type: Protein
SIO_000068: ncbiprotein

P09569
type: GOA
SIO_000068: goa

P03252
type: HSSP
SIO_000068: hssp

IPR000855
type: InterPro
SIO_000068: interpro

P09569
type: UniProt
SIO_000068: uniprot

position:20525:1
position: 20525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21145:1
position: 21145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20525-21145:1:exon

HAdVAgp08
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
gene: L3
locus tag: HAdVAgp08
SIO_010081: HAdVAgp08
subclass of: SO_0000673
so part of: HAdVAgp08
location: 21141..21146
location: region:21141-21146:1
so has part: feature:21141-21146:1:exon

position:21141:1
position: 21141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21146:1
position: 21146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21141-21146:1:exon

HAdVAgp08
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
gene: L3
locus tag: HAdVAgp08
SIO_010081: HAdVAgp08
subclass of: SO_0000673
so part of: HAdVAgp08
location: 21167..21172
location: region:21167-21172:1
so has part: feature:21167-21172:1:exon

position:21167:1
position: 21167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21167-21172:1:exon

HAdVAgp12
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: E2A
locus tag: HAdVAgp12
so part of: sequence
location: complement(21178..25523)
location: region:21178-25523:-1
so has part: feature:21178-25523:-1:exon
subclass of: SO_0000010

1460850
type: Gene
SIO_000068: ncbigene

position:21178:-1
position: 21178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25523:-1
position: 25523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21178-25523:-1:exon

HAdVAgp13
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: E2A-L
locus tag: HAdVAgp13
so part of: sequence
location: complement(21178..24521)
location: region:21178-24521:-1
so has part: feature:21178-24521:-1:exon

1460851
type: Gene
SIO_000068: ncbigene

position:24521:-1
position: 24521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21178-24521:-1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
note: E2A, E2A-L
so part of: sequence
location: complement(21178..21183)
location: region:21178-21183:-1
so has part: feature:21178-21183:-1:region

position:21183:-1
position: 21183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21178-21183:-1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
note: E2A, E2A-L
so part of: sequence
location: complement(21211..21216)
location: region:21211-21216:-1
so has part: feature:21211-21216:-1:region

position:21211:-1
position: 21211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21216:-1
position: 21216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21211-21216:-1:region

HAdVAgp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E2A
locus tag: HAdVAgp12
function: DNA replication
note: DBP; genus-common; DBP family
codon start: 1
product: single-stranded DNA-binding protein
translation: MASNQHSQRERTPDRSAQPPPPKMGRYFLDSESEEELEAVPLPPKKKVKKSMAAIPLSPESAEEEEAEPPRAVLGVMGFSMPPVRIMHHADGSQSFQKMETRQVHVLKASAQNSDENEKNVVVVRNPASQPLVSAWEKGMEAMAMLMEKYHVDHDERATFRFLPDQGSVYKKICTTWLNEEKRGLQLTFSSQKTFQELMGRFLQGYMQAYAGVQQNSWEPTGCCVWEHKCTEREGELRCLHGMEMVRKEHLVEMDVTSESGQRALKENPSKAKVAQNRWGRNVVQIKNDDARCCFHDVGCGNNSFSGKSCGLFYSEGMKAQIAFRQIEAFMLADYPHMRHGQKRLLMPVRCECLNKQDGLPRMGRQLCKITPFNLSNVDNIDINEVTDPGALASIKYPCLLVFQCANPVYRNARGNAGPNCDFKISAPDVMGALQLVRQLWGENFDGSPPRLVIPEFKWHQRLQYRNISLPTNHGDCREEPFDF
SIO_010081: HAdVAgp12
subclass of: SO_0000673
so part of: HAdVAgp12
location: complement(21215..22669)
location: region:21215-22669:-1
so has part: feature:21215-22669:-1:exon

NP_040926.1
type: Protein
SIO_000068: ncbiprotein

P04498
type: GOA
SIO_000068: goa

P03265
type: HSSP
SIO_000068: hssp

IPR003176
type: InterPro
SIO_000068: interpro

IPR005376
type: InterPro
SIO_000068: interpro

P04498
type: UniProt
SIO_000068: uniprot

position:21215:-1
position: 21215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22669:-1
position: 22669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21215-22669:-1:exon

intron
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
note: E2A, E2A-L; precedes single-stranded DNA-binding protein CDS
so part of: sequence
location: complement(22679..23247)
location: region:22679-23247:-1
so has part: feature:22679-23247:-1:region

position:22679:-1
position: 22679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23247:-1
position: 23247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22679-23247:-1:region

HAdVAgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L4
locus tag: HAdVAgp07
function: capsid morphogenesis
function: translational regulation
note: genus-common
codon start: 1
product: hexon assembly protein 100K
translation: MMDLEPQESLTAPTAPAIGATAVMEKDKSLLIPQDAPVEQNLGYETPPEEFEGFLQIQKQPNEQNAGLEDHDYLNEGDVLFKHLQRQSTIVRDAISDRSSIPVSIAELSCIYERNLFSPRVPPKRQANGTCEPNPRLNFYPVFAVPEALATYHIFFKNHKIPLSCRANRSRADELLALRAGASIPGIVSLEEVPKIFEGLGRDEKRAANALQKENEQNHHGNSALIELEGDNARLAVLKRNIEVTHFAYPAVNLPPKVMSAVMNQLLIKRAQPIDKDANLQDPEATDDGKPVVSDEQLTKWLGTDNSNELQQRRKLMMAAVLVTVELECMHRFFSDITTLRKIEECLHYTFRHGYVRQACKISNVELSNLVSYMGILHENRLGQNVLHSTLRDEARRDYVRDCIYLFLLHTWQTGMGVWQQCLEEKNLRELNKLLDRALKSLWTGFDERTVAAELADIIFPERLMITLQNGLPDFMSQSMLHNYRSFILERSGMLPSMCCALPSDFVPIYFRECPPPLWSHCYLLRLANYLAYHSDLMTDSSGEGLMECHCRCNLCTPHRSLVCNTELLSESQVIGTFEMQGPQSDSNFTTNLRLTPGLWTSAYLRKFEPQDYHAHSINFYEDQSKPPKAPLTACVITQGKILAQLHAIKQAREEFLLKKGHGVYLDPQTGEELNLPSPLCATASPHSQHVPESRKTGYCAATLKETAATAGNLGGRILGESGRGRGRGLGRMGGGGGGQPRRGSRGGGGRFQGRSDRRQTVAFNQALSNETRCEQISESQP
SIO_010081: HAdVAgp07
subclass of: SO_0000673
so part of: HAdVAgp07
location: 22695..25043
location: region:22695-25043:1
so has part: feature:22695-25043:1:exon

NP_040927.1
type: Protein
SIO_000068: ncbiprotein

P36714
type: GOA
SIO_000068: goa

IPR003381
type: InterPro
SIO_000068: interpro

P36714
type: UniProt
SIO_000068: uniprot

position:22695:1
position: 22695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25043:1
position: 25043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22695-25043:1:exon

intron
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
note: E2A, E2B
so part of: sequence
location: complement(23325..25455)
location: region:23325-25455:-1
so has part: feature:23325-25455:-1:region

position:23325:-1
position: 23325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23325-25455:-1:region

HAdVAgp13
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E2A-L
locus tag: HAdVAgp13
SIO_010081: HAdVAgp13
subclass of: SO_0000673
so part of: HAdVAgp13
location: complement(23325..24424)
location: region:23325-24424:-1
so has part: feature:23325-24424:-1:exon

position:24424:-1
position: 24424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23325-24424:-1:exon

HAdVAgp13
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: TATA_box
gene: E2A-L
locus tag: HAdVAgp13
SIO_010081: HAdVAgp13
subclass of: SO_0000673
so part of: HAdVAgp13
location: complement(24515..24521)
location: region:24515-24521:-1
so has part: feature:24515-24521:-1:exon

position:24515:-1
position: 24515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24515-24521:-1:exon

HAdVAgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L4
locus tag: HAdVAgp07
function: RNA splicing
note: genus-common
codon start: 1
product: protein 33K
translation: MSPKAAKQAIAQQRSKKQQQRQEIWEEESWESQAEDEVEDLEEWEEEEADSLDEDPEEEEEGSKDGATAAKPSLSTKPSPMKPAVSKSQKANRRWDTIETSAANLAPLKSSTRNRPATAKRPTRIGNSSNKESPEARELRKRIFPTLYAIFQQSRGQEHELKIKNRSLRSLTRSCLYLKSEDQLQRTLQDAEALFNKYCSLSLKE
SIO_010081: HAdVAgp07
subclass of: SO_0000673
so part of: HAdVAgp07
location: join(24763..25078,25257..25558)
location: region:24763-25558:1
so has part: feature:24763-25078:1:exon
so has part: feature:25257-25558:1:exon

NP_597783.2
type: Protein
SIO_000068: ncbiprotein

position:24763:1
position: 24763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25558:1
position: 25558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24763-25078:1:exon

position:25078:1
position: 25078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25257-25558:1:exon

position:25257:1
position: 25257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HAdVAgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L4
locus tag: HAdVAgp07
function: DNA encapsidation
function: capsid morphogenesis
function: transcriptional control
note: genus-common
codon start: 1
product: encapsidation protein 22K
translation: MSPKAAKQAIAQQRSKKQQQRQEIWEEESWESQAEDEVEDLEEWEEEEADSLDEDPEEEEEGSKDGATAAKPSLSTKPSPMKPAVSKSQKANRRWDTIETSAANLGKNRKQARRGYCSWRAHQSNIVACFQHCGGNISFARRYLLYHDGVAIPRNVLHYYRHLYSPFEELDKEPTCNSQAAH
SIO_010081: HAdVAgp07
subclass of: SO_0000673
so part of: HAdVAgp07
location: 24763..25311
location: region:24763-25311:1
so has part: feature:24763-25311:1:exon

YP_002640219.1
type: Protein
SIO_000068: ncbiprotein

position:25311:1
position: 25311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24763-25311:1:exon

HAdVAgp07
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: L4
locus tag: HAdVAgp07
SIO_010081: HAdVAgp07
subclass of: SO_0000673
so part of: HAdVAgp07
location: 25079..25256
location: region:25079-25256:1
so has part: feature:25079-25256:1:exon

position:25079:1
position: 25079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25256:1
position: 25256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25079-25256:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: TATA_box
note: E2A, E2B; nominal
so part of: sequence
location: complement(25547..25552)
location: region:25547-25552:-1
so has part: feature:25547-25552:-1:region

position:25547:-1
position: 25547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25547-25552:-1:region

HAdVAgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L4
locus tag: HAdVAgp07
function: capsid morphogenesis
note: genus-common
codon start: 1
product: capsid protein precursor pVIII
translation: MSKDIPTPYMWSFQPQMGLAAGAAQDYSSKMNWLSAGPHMISRVNGVRARRNQILLEQAALTATPRNQLNPPSWPAALIYQENPPPTTVLLPRDAQAEVHMTNAGAQLAGGARHSFRYKGRTEPYPSPAIKRVLIRGKGIQLNDEVTSPLGVRPDGVFQLGGSGRSSFTARQAYLTLQSSSSAPRSGGIGTLQFVEEFTPSVYFNPFSGSPGHYPDAFIPNFDAVSESVDGYD
SIO_010081: HAdVAgp07
subclass of: SO_0000673
so part of: HAdVAgp07
location: 25612..26313
location: region:25612-26313:1
so has part: feature:25612-26313:1:exon

NP_040928.1
type: Protein
SIO_000068: ncbiprotein

P36713
type: GOA
SIO_000068: goa

IPR000646
type: InterPro
SIO_000068: interpro

P36713
type: UniProt
SIO_000068: uniprot

position:25612:1
position: 25612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26313:1
position: 26313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25612-26313:1:exon

HAdVAgp14
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
so part of: sequence
location: 25998..29195
location: region:25998-29195:1
so has part: feature:25998-29195:1:exon
subclass of: SO_0000010

1460862
type: Gene
SIO_000068: ncbigene

position:25998:1
position: 25998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25998-29195:1:exon

HAdVAgp14
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: TATA_box
gene: E3
locus tag: HAdVAgp14
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 25998..26003
location: region:25998-26003:1
so has part: feature:25998-26003:1:exon

position:26003:1
position: 26003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25998-26003:1:exon

HAdVAgp14
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
note: precedes control protein E3 14.7K CDS
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 26047..28780
location: region:26047-28780:1
so has part: feature:26047-28780:1:exon

position:26047:1
position: 26047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28780:1
position: 28780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26047-28780:1:exon

HAdVAgp14
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
note: precedes membrane protein E3 RID-beta CDS
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 26047..28470
location: region:26047-28470:1
so has part: feature:26047-28470:1:exon

position:28470:1
position: 28470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26047-28470:1:exon

HAdVAgp14
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
note: precedes membrane protein E3 RID-alpha CDS
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 26047..28205
location: region:26047-28205:1
so has part: feature:26047-28205:1:exon

position:28205:1
position: 28205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26047-28205:1:exon

HAdVAgp14
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
note: precedes membrane glycoprotein E3 CR1-beta CDS
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 26047..27355
location: region:26047-27355:1
so has part: feature:26047-27355:1:exon

position:27355:1
position: 27355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26047-27355:1:exon

HAdVAgp14
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
note: precedes membrane glycoprotein E3 CR1-alpha CDS
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 26047..26435
location: region:26047-26435:1
so has part: feature:26047-26435:1:exon

position:26435:1
position: 26435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26047-26435:1:exon

HAdVAgp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
function: unknown
note: genus-specific; 12.5K family
codon start: 1
product: control protein E3 12.5K
translation: MSNGAADRARLRHLDHCRQPHCFARDICVFTYFELPEEHPQGPAHGVRITVEKGIDTHLIKFFTKRPLLVEKDQGNTILTLYCICPVPGLHEDFCCHLCAEFNHL
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 26313..26630
location: region:26313-26630:1
so has part: feature:26313-26630:1:exon

NP_040929.1
type: Protein
SIO_000068: ncbiprotein

IPR007912
type: InterPro
SIO_000068: interpro

P36706
type: UniProt
SIO_000068: uniprot

position:26630:1
position: 26630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26313-26630:1:exon

HAdVAgp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
function: unknown
note: 1 CR1 domain; genus-specific; MP family
codon start: 1
product: membrane glycoprotein E3 CR1-alpha
translation: MKISAVICVLNLIICSGAVPPEEEPNCHPHLSNIKINLSIPHITLRCSFFSTHLTWTFNGKHVTNTDIKFKLHKENITLFQPINLGYYRCSAPPCTQAFFVAPVIDKRPAPTTAAVTEHITEAVSPSKGTEEIVYFSNFTNHLVLNCSCSNSLISWFANSSLCKTFYQGKLLYSAKLTLCNQSTPSHLTLLPPFVAGRYFCIGAARTSPCQQHWNLTYCPPPVSPFVINTEYLDYNPLLAYGGLAALILFLISNLFLVQHLYSY
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 26584..27378
location: region:26584-27378:1
so has part: feature:26584-27378:1:exon

YP_002640220.1
type: Protein
SIO_000068: ncbiprotein

position:26584:1
position: 26584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27378:1
position: 27378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26584-27378:1:exon

HAdVAgp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
function: unknown
note: 1 CR1 domain; genus-specific; MP family
codon start: 1
product: membrane glycoprotein E3 CR1-beta
translation: MLSIFLLFLFSLPSGLYAQTAERPLKVVVEAGHNVTLPHLSGSHQTGHVTWLVETSDYGSASPDNFIFSGQKLCQFTDRTMVWPYYNLHFNCENYDLNLFWLKVENSAIYNVKNTVNASETNIYYDLRVVQIFPPKCIITSKYLTNDYCHITINCTNSDYPNKVVFNNVSRWYYGYGKGSPTLPNYFITNFNVSGITKSFNHTYPFNELCDYPTSQSQHSLTHTVSTVIFLGIIGFSILIIIAAFIYLCWHRKSLCVSKTEPLMPIPY
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 27381..28187
location: region:27381-28187:1
so has part: feature:27381-28187:1:exon

YP_002640221.1
type: Protein
SIO_000068: ncbiprotein

position:27381:1
position: 27381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28187:1
position: 28187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27381-28187:1:exon

HAdVAgp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
function: apoptosis
note: genus-specific; MP family
codon start: 1
product: membrane protein E3 RID-alpha
translation: MVTVLLIFLCLPVIFSSSTFAAVSDLDPECLAPFAVYLIFTFVTATCVCSIITLLITSLQFFDYYYVRIVYRRHHPRYQNPQIAALLQLQP
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 28207..28482
location: region:28207-28482:1
so has part: feature:28207-28482:1:exon

NP_040930.1
type: Protein
SIO_000068: ncbiprotein

P36705
type: GOA
SIO_000068: goa

IPR005041
type: InterPro
SIO_000068: interpro

P36705
type: UniProt
SIO_000068: uniprot

position:28207:1
position: 28207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28482:1
position: 28482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28207-28482:1:exon

HAdVAgp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
function: apoptosis
note: genus-specific; MP family
codon start: 1
product: membrane protein E3 RID-beta
translation: MKTALVLFFMLIPVWASSCQLHKPWNFLDCYTKETNYIGWVYGIMSGLVFVSSVVSLQLYARLNFSWNKYTDDLPEYPNPQDDLPLNIVFPEPPRPPSVVSYFKFTGEDD
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 28479..28811
location: region:28479-28811:1
so has part: feature:28479-28811:1:exon

NP_040931.1
type: Protein
SIO_000068: ncbiprotein

P36707
type: GOA
SIO_000068: goa

IPR008131
type: InterPro
SIO_000068: interpro

P36707
type: UniProt
SIO_000068: uniprot

position:28479:1
position: 28479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28811:1
position: 28811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28479-28811:1:exon

HAdVAgp14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E3
locus tag: HAdVAgp14
function: apoptosis
note: genus-specific; 12.5K family
codon start: 1
product: control protein E3 14.7K
translation: MIEPDLEIDGRITEQRLLTDRARRRQQDQKNKELIDLQTVHQCKKGLFCLVKQATLRYESLPGKEHQLCYTLPTQRQTFTAMVGSVPIKVSQQAGEQEGSIRCLCDNPECLYTLIKTLCGLRNLLPMN
SIO_010081: HAdVAgp14
subclass of: SO_0000673
so part of: HAdVAgp14
location: 28804..29190
location: region:28804-29190:1
so has part: feature:28804-29190:1:exon

NP_040932.1
type: Protein
SIO_000068: ncbiprotein

Q65288
type: GOA
SIO_000068: goa

IPR004985
type: InterPro
SIO_000068: interpro

Q65288
type: UniProt
SIO_000068: uniprot

position:28804:1
position: 28804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29190:1
position: 29190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28804-29190:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
note: L4, E3
so part of: sequence
location: 29190..29195
location: region:29190-29195:1
so has part: feature:29190-29195:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:29190-29195:1:region

HAdVAgp15
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: U
locus tag: HAdVAgp15
so part of: sequence
location: complement(<29204..29358)
location: region:29204-29358:-1
so has part: feature:29204-29358:-1:exon
subclass of: SO_0000010

1460857
type: Gene
SIO_000068: ncbigene

position:29204:-1
position: 29204
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:29358:-1
position: 29358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29204-29358:-1:exon

HAdVAgp15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: U
locus tag: HAdVAgp15
function: unknown
note: exon encoding C terminus unidentified; genus-common
codon start: 1
product: protein U
translation: MKMVGRDWEEESDLPFKIWRKFAVCKSVRFDSWEEGNFIRVHGDHDVFSDFR
SIO_010081: HAdVAgp15
subclass of: SO_0000673
so part of: HAdVAgp15
location: complement(<29204..29358)
location: region:29204-29358:-1
so has part: feature:29204-29358:-1:exon

YP_002640222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29204-29358:-1:exon

HAdVAgp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: L5
locus tag: HAdVAgp06
function: cell attachment
note: capsid protein IV; genus-common; fiber family
codon start: 1
product: fiber
translation: MKRSRTQYAEETEENDDFNPVYPFDPFDTSDVPFVTPPFTSSNGLQEKPPGVLALNYKDPIVTENGTLTLKLGDGIKLNAQGQLTASNNINVLEPLTNTSQGLKLSWSAPLAVKASALTLNTRAPLTTTDESLALITAPPITVESSRLGLATIAPLSLDGGGNLGLNLSAPLDVSNNNLHLTTETPLVVNSSGALSVATADPISVRNNALTLPTADPLMVSSDGLGISVTSPITVINGSLALSTTAPLNSTGSTLSLSVANPLTISQDTLTVSTGNGLQVSGSQLVTRIGDGLTFDNGVMKVNVAGGMRTSGGRIILDVNYPFDASNNLSLRRGLGLIYNQSTNWNLTTDISTEKGLMFSGNQIALNAGQGLTFNNGQLRVKLGAGLIFDSNNNIALGSSSNTPYDPLTLWTTPDPPPNCSLIQELDAKLTLCLTKNGSIVNGIVSLVGVKGNLLNIQSTTTTVGVHLVFDEQGRLITSTPTALVPQASWGYRQGQSVSTNTVTNGLGFMPNVSAYPRPNASEAKSQMVSLTYLQGDTSKPITMKVAFNGITSLNGYSLTFMWSGLSNYINQPFSTPSCSFSYITQE
SIO_010081: HAdVAgp06
subclass of: SO_0000673
so part of: HAdVAgp06
location: 29368..31131
location: region:29368-31131:1
so has part: feature:29368-31131:1:exon

NP_040933.1
type: Protein
SIO_000068: ncbiprotein

P36711
type: GOA
SIO_000068: goa

IPR000931
type: InterPro
SIO_000068: interpro

IPR000939
type: InterPro
SIO_000068: interpro

IPR000978
type: InterPro
SIO_000068: interpro

1KAC
type: PDB
SIO_000068: pdb

1NOB
type: PDB
SIO_000068: pdb

1P69
type: PDB
SIO_000068: pdb

1P6A
type: PDB
SIO_000068: pdb

P36711
type: UniProt
SIO_000068: uniprot

position:29368:1
position: 29368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31131:1
position: 31131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29368-31131:1:exon

HAdVAgp06
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
gene: L5
locus tag: HAdVAgp06
SIO_010081: HAdVAgp06
subclass of: SO_0000673
so part of: HAdVAgp06
location: 31127..31132
location: region:31127-31132:1
so has part: feature:31127-31132:1:exon

position:31127:1
position: 31127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31127-31132:1:exon

HAdVAgp16
type: Gene
subclass of: SO_0000704
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
so part of: sequence
location: complement(31166..33843)
location: region:31166-33843:-1
so has part: feature:31166-33843:-1:exon
subclass of: SO_0000010

1460865
type: Gene
SIO_000068: ncbigene

position:31166:-1
position: 31166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33843:-1
position: 33843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31166-33843:-1:exon

HAdVAgp16
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: polyA_signal_sequence
gene: E4
locus tag: HAdVAgp16
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(31166..31171)
location: region:31166-31171:-1
so has part: feature:31166-31171:-1:exon

position:31171:-1
position: 31171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31166-31171:-1:exon

HAdVAgp16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
function: gene regulation
function: cell cycle regulation
note: genus-specific
codon start: 1
product: control protein E4orf6/7
translation: MQRDRRYRYRLAPYNKYQLPPCEEQSKATLSTSENSLWPECNSLTLHNDKIMDLVLDGECRLSDCAGEGFVSITDPRFARKETVWTLTPKNLSRNIQVQLFSATKGEREVYKVKWEGGSLTTRIV
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(join(31183..31416,32168..32311))
location: region:31183-32311:-1
so has part: feature:32168-32311:-1:exon
so has part: feature:31183-31416:-1:exon

NP_597784.2
type: Protein
SIO_000068: ncbiprotein

position:31183:-1
position: 31183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32311:-1
position: 32311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32168-32311:-1:exon

position:32168:-1
position: 32168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31183-31416:-1:exon

position:31416:-1
position: 31416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAdVAgp16
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(31417..32167)
location: region:31417-32167:-1
so has part: feature:31417-32167:-1:exon

position:31417:-1
position: 31417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32167:-1
position: 32167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31417-32167:-1:exon

HAdVAgp16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
function: apoptosis
function: DNA damage response
function: RNA metabolism and transport
function: transformation
note: E4orf6; genus-specific; 34K family
codon start: 1
product: control protein E4 34K
translation: MQRDRRYRYRLAPYNKYQLPPCEEQSKATLSTSENSLWPECNSLTLHNVSEVRGIPSCVGFTVLQEWPIPWDMILTDYEMFILKKYMSVCMCCATINVEVTQLLHGHERWLIHCHCQRPGSLQCMSAGMLLGRWFKMAVYGALINKRCFWYREVVNHLMPKEVMYVGSTFVRGRHLIYFKIMYDGHAWLALEKVSFGWSAFNYGILNNMLVLCCDYCKDLSEIRMRCCARRTRLLMLKVVQVIAENTVRPLKHSRHERYRQQLLKGLIMHHRAILFGDYNQRENPWAADGH
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(31436..32311)
location: region:31436-32311:-1
so has part: feature:31436-32311:-1:exon

NP_040934.1
type: Protein
SIO_000068: ncbiprotein

IPR007615
type: InterPro
SIO_000068: interpro

P36710
type: UniProt
SIO_000068: uniprot

position:31436:-1
position: 31436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31436-32311:-1:exon

HAdVAgp16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
function: RNA splicing
note: genus-specific
codon start: 1
product: control protein E4orf4
translation: MPLPCIPPPPVSRDTAACIAWLGLAHASCVDTLRFIKHHDLKITPEAEYILASLREWLYFAFLTERQRCKQKGRGAITSGRTWFCFFKYEDARKSVVYDAARQTVSLQIGTIQQVPTTAL
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(32244..32606)
location: region:32244-32606:-1
so has part: feature:32244-32606:-1:exon

NP_040935.1
type: Protein
SIO_000068: ncbiprotein

IPR008680
type: InterPro
SIO_000068: interpro

P36709
type: UniProt
SIO_000068: uniprot

position:32244:-1
position: 32244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32606:-1
position: 32606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32244-32606:-1:exon

HAdVAgp16
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
note: precedes control protein E4 34K CDS
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(32343..33780)
location: region:32343-33780:-1
so has part: feature:32343-33780:-1:exon

position:32343:-1
position: 32343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33780:-1
position: 33780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32343-33780:-1:exon

HAdVAgp16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
function: DNA damage response
function: transformation
note: genus-specific
codon start: 1
product: control protein E4orf3
translation: MKYCLRMAVEGALTELFNIHGLNLQNQCVQIIQQWKNENYLGMVQSGSLMIEEFHDNAFALLLFIEIRAVALLEAVVEHLENRLQFDLAVIFHQHSGGDRCHLRDLRIQILADRLD
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(32613..32963)
location: region:32613-32963:-1
so has part: feature:32613-32963:-1:exon

NP_040936.1
type: Protein
SIO_000068: ncbiprotein

IPR009699
type: InterPro
SIO_000068: interpro

P36708
type: UniProt
SIO_000068: uniprot

position:32613:-1
position: 32613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32963:-1
position: 32963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32613-32963:-1:exon

HAdVAgp16
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
note: precedes control protein E4orf4 CDS
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(32677..33780)
location: region:32677-33780:-1
so has part: feature:32677-33780:-1:exon

position:32677:-1
position: 32677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32677-33780:-1:exon

HAdVAgp16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
function: unknown
note: genus-specific
codon start: 1
product: control protein E4orf2
translation: MFQRSLVHYSVLFPESLRNYLHGLDFEVVTFLKDVLPEFWLLVMHYLTPPMRDVYVGATLTNMGPFVQVVCSVGTPELVPGGELSLLLASDLYDFIQLALRCQLRDQGVEPNVNLLNLLQVFEDPDFFQQI
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(32960..33355)
location: region:32960-33355:-1
so has part: feature:32960-33355:-1:exon

YP_002640223.1
type: Protein
SIO_000068: ncbiprotein

position:32960:-1
position: 32960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33355:-1
position: 33355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32960-33355:-1:exon

HAdVAgp16
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
note: precedes control protein E4orf3 CDS
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(32996..33780)
location: region:32996-33780:-1
so has part: feature:32996-33780:-1:exon

position:32996:-1
position: 32996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32996-33780:-1:exon

HAdVAgp16
type: Intron
subclass of: SO_0000188
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
note: precedes control protein E4orf2 CDS
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(33369..33780)
location: region:33369-33780:-1
so has part: feature:33369-33780:-1:exon

position:33369:-1
position: 33369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33369-33780:-1:exon

HAdVAgp16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 129875
gene: E4
locus tag: HAdVAgp16
function: transformation
note: genus-specific; DURP family
codon start: 1
product: control protein E4orf1
translation: MAAFETLYVYFTGPGAMLPKQEGDSNAYVLFSPANFVIPPHGVVLLYLHIAVDIPPGYLGTLFSLCDMNARGVFVGAETLYPGSRMELSVLLFNHSDVFCDVRAKQPVARLLLSRVVFPPVCQASLI
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(33387..33770)
location: region:33387-33770:-1
so has part: feature:33387-33770:-1:exon

YP_002640224.1
type: Protein
SIO_000068: ncbiprotein

position:33387:-1
position: 33387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33770:-1
position: 33770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33387-33770:-1:exon

HAdVAgp16
type: Feature
subclass of: SO_0000001
RO_0002162: 129875
regulatory class: TATA_box
gene: E4
locus tag: HAdVAgp16
SIO_010081: HAdVAgp16
subclass of: SO_0000673
so part of: HAdVAgp16
location: complement(33838..33843)
location: region:33838-33843:-1
so has part: feature:33838-33843:-1:exon

position:33838:-1
position: 33838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33838-33843:-1:exon

repeat_region
type: Repeat Region
subclass of: SO_0000657
RO_0002162: 129875
standard name: ITR
rpt type: inverted
rpt type: terminal
so part of: sequence
location: 33963..34125
location: region:33963-34125:1
so has part: feature:33963-34125:1:region

position:33963:1
position: 33963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33963-34125:1:region