Paucilactobacillus nenjiangensis strain SH-Y15 plasmid pHY011, complete sequence.
type: Entry
definition: Paucilactobacillus nenjiangensis strain SH-Y15 plasmid pHY011, complete sequence.
sequence version: NZ_CP043940.1
sequence date: 2022-10-24
sequence: sequence
division: CON
label: NZ_CP043940.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN12687954
keyword: RefSeq
source: Paucilactobacillus nenjiangensis
organism: Paucilactobacillus nenjiangensis
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Paucilactobacillus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP043940.1.\nBacteria and source DNA available from Fermented vegetables.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: FALCON v. v0.3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 48.85x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/24/2022 01:13:58\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,285\nCDSs (total) :: 2,213\nGenes (coding) :: 2,138\nCDSs (with protein) :: 2,138\nGenes (RNA) :: 72\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 54\nncRNAs :: 3\nPseudo Genes (total) :: 75\nCDSs (without protein) :: 75\nPseudo Genes (ambiguous residues) :: 0 of 75\nPseudo Genes (frameshifted) :: 24 of 75\nPseudo Genes (incomplete) :: 33 of 75\nPseudo Genes (internal stop) :: 30 of 75\nPseudo Genes (multiple problems) :: 11 of 75\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 42799
topology: circular
so has quality: SO_0000988
location: 1..42799
location: region:1-42799:1
RO_0002162: 1296540

NZ_CP043940
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN12687954
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequence of Lactobacillus nenjiangensis SH-Y15, isolated from sauerkraut
author: Yang, H.
journal: Unpublished

2
title: Direct Submission
author: Yang, H.
journal: Submitted (11-SEP-2019) College of Life Sciences, Northeast Forestry University, No. 26 Hexing Road, Harbin, Heilongjiang 150040, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42799:1
position: 42799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-42799:1:source
so part of: sequence
organism: Paucilactobacillus nenjiangensis
mol type: genomic DNA
strain: SH-Y15
isolation source: fermented vegetable
plasmid: pHY011
country: China: Suihua City, Heilongjiang Province
collection date: 2017-02

1296540
type: Taxonomy
SIO_000068: taxonomy

F0161_RS11075
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11075
old locus tag: F0161_11075
pseudo: true
so part of: sequence
location: join(42560..42799,1..1821)
location: region:1-42799:1
so has part: feature:42560-42799:1:exon
so has part: feature:1-1821:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:42560-42799:1:exon

position:42560:1
position: 42560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-1821:1:exon

position:1821:1
position: 1821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F0161_RS11075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11075
old locus tag: F0161_11075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016511122.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: MobA/MobL family protein
SIO_010081: F0161_RS11075
subclass of: SO_0000673
so part of: F0161_RS11075
location: join(42560..42799,1..1821)
location: region:1-42799:1
so has part: feature:42560-42799:1:exon
so has part: feature:1-1821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42560-42799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-1821:1:exon

F0161_RS11640
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11640
pseudo: true
so part of: sequence
location: 1918..>3320
location: region:1918-3320:1
so has part: feature:1918-3320:1:exon
subclass of: SO_0000010

position:1918:1
position: 1918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3320:1
position: 3320
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1918-3320:1:exon

F0161_RS11640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002825295.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DNA topoisomerase
SIO_010081: F0161_RS11640
subclass of: SO_0000673
so part of: F0161_RS11640
location: 1918..>3320
location: region:1918-3320:1
so has part: feature:1918-3320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1918-3320:1:exon

F0161_RS11100
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11100
old locus tag: F0161_11100
so part of: sequence
location: complement(4028..4285)
location: region:4028-4285:-1
so has part: feature:4028-4285:-1:exon
subclass of: SO_0000010

position:4028:-1
position: 4028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4285:-1
position: 4285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4028-4285:-1:exon

F0161_RS11100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11100
old locus tag: F0161_11100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010002105.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MPYKKEFKQSLVEMHNQGRSYTDLSAEYGPSVDSIRNWVKLYAVHEVDGEKWKQADVNALQKENDKLREELEILKRAAVLLSKYN
SIO_010081: F0161_RS11100
subclass of: SO_0000673
so part of: F0161_RS11100
location: complement(4028..4285)
location: region:4028-4285:-1
so has part: feature:4028-4285:-1:exon

WP_225423286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4028-4285:-1:exon

F0161_RS11105
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11105
old locus tag: F0161_11105
pseudo: true
so part of: sequence
location: 4379..>4603
location: region:4379-4603:1
so has part: feature:4379-4603:1:exon
subclass of: SO_0000010

position:4379:1
position: 4379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4603:1
position: 4603
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4379-4603:1:exon

F0161_RS11105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11105
old locus tag: F0161_11105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011373852.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: F0161_RS11105
subclass of: SO_0000673
so part of: F0161_RS11105
location: 4379..>4603
location: region:4379-4603:1
so has part: feature:4379-4603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4379-4603:1:exon

F0161_RS11110
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11110
old locus tag: F0161_11110
so part of: sequence
location: complement(4636..5166)
location: region:4636-5166:-1
so has part: feature:4636-5166:-1:exon
subclass of: SO_0000010

position:4636:-1
position: 4636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5166:-1
position: 5166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4636-5166:-1:exon

F0161_RS11110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11110
old locus tag: F0161_11110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010491919.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015225 - biotin transmembrane transporter activity [Evidence IEA]
GO process: GO:0015878 - biotin transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin transporter BioY
translation: MMNAKQLSLNATLLALLIILGMTPPIAVGLPVPIVLQNFGIFLIAGLLNTRSATLVIATFLTLTALGLPLLSGMRGGLPVMIGPTGGYLLGWLLTPISVAAVQRLLATKTVPSLWALLLGGMFVTDLAGTIWLTIFYHTPFTVALLSNLVYIPGDLIKIVACSVVLTAVNRAVSFK
SIO_010081: F0161_RS11110
subclass of: SO_0000673
so part of: F0161_RS11110
location: complement(4636..5166)
location: region:4636-5166:-1
so has part: feature:4636-5166:-1:exon

WP_225423289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4636-5166:-1:exon

F0161_RS11115
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
gene: fabZ
locus tag: F0161_RS11115
old locus tag: F0161_11115
so part of: sequence
location: 5307..5753
location: region:5307-5753:1
so has part: feature:5307-5753:1:exon
subclass of: SO_0000010

position:5307:1
position: 5307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5753:1
position: 5753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5307-5753:1:exon

F0161_RS11115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
gene: fabZ
locus tag: F0161_RS11115
old locus tag: F0161_11115
EC number: 4.2.1.59
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014214630.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-hydroxyacyl-ACP dehydratase FabZ
translation: MAILSAQEIMELIPNRYPILFMDYVDELEPGESIVATKNVTINEEFFQGHFPGNPVMPGVLIIESLAQAASILILKSPEFAGKTAYLGAIKDARFHQIVRPGDVLKLHVAFTKRRSNMGVVHTEATVGDNVAAKADLTFIVAPNTASN
SIO_010081: F0161_RS11115
subclass of: SO_0000673
so part of: F0161_RS11115
location: 5307..5753
location: region:5307-5753:1
so has part: feature:5307-5753:1:exon

WP_041095665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5307-5753:1:exon

F0161_RS11120
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11120
old locus tag: F0161_11120
so part of: sequence
location: 5766..6233
location: region:5766-6233:1
so has part: feature:5766-6233:1:exon
subclass of: SO_0000010

position:5766:1
position: 5766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6233:1
position: 6233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5766-6233:1:exon

F0161_RS11120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11120
old locus tag: F0161_11120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003559611.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MAEEKNNISKADFRFMNDALVDVYDHIMRIEEETLRKSTFRDISVKEIHLIHAITLHDHKTSTEVANELRLTKGTLTTNVKTLERKGYVKRINDEQDHRVARLTLTNKGKLLYRAHDAFHRQIVKSFIKGMDGNEVKVIKRALINLEDFLSDITQ
SIO_010081: F0161_RS11120
subclass of: SO_0000673
so part of: F0161_RS11120
location: 5766..6233
location: region:5766-6233:1
so has part: feature:5766-6233:1:exon

WP_041095667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5766-6233:1:exon

F0161_RS11125
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11125
old locus tag: F0161_11125
so part of: sequence
location: 6244..7221
location: region:6244-7221:1
so has part: feature:6244-7221:1:exon
subclass of: SO_0000010

position:6244:1
position: 6244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7221:1
position: 7221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6244-7221:1:exon

F0161_RS11125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11125
old locus tag: F0161_11125
EC number: 2.3.1.180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010022514.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase III
translation: MTFNLITTARAVPDQIITNSDLAKIMPTSDEWIKQRTGIERRHLASTETTESLCIDVAQQLVQANSIGPKQIDLIVVATMSPTYSMPSVAATVQGAIGAENAATLDVNAACTGFVYAMAVAHDMAVAKGYQNVIVIGGEVMSKYVNWQDRSTAVLFGDGAAGVLLALNEDGQDHYLGDAFKTFGEKGRSLMADFRPNNSPFAKPVEADSYLTMDGHQIYNFVIKKAPVVIEEVLQKTGLTLPDIDWVVFHQANARIIQQLSKKLGLTAQQCPINIDEYGNVAAASEPLVLNDLVASDQLKPGDKVLLCGFGGGLTIGASIFDYYN
SIO_010081: F0161_RS11125
subclass of: SO_0000673
so part of: F0161_RS11125
location: 6244..7221
location: region:6244-7221:1
so has part: feature:6244-7221:1:exon

WP_061777535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6244-7221:1:exon

F0161_RS11130
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11130
old locus tag: F0161_11130
so part of: sequence
location: 7247..7492
location: region:7247-7492:1
so has part: feature:7247-7492:1:exon
subclass of: SO_0000010

position:7247:1
position: 7247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7492:1
position: 7492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7247-7492:1:exon

F0161_RS11130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11130
old locus tag: F0161_11130
inference: COORDINATES: protein motif:HMM:NF002150.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl carrier protein
translation: MSKEEIIAKIMNVLQQDDSMEGKDITPDMSFKQEMNLDSLDIFELVNEIEDEFEIEIDTDESLDTVNQVADYVQKQLAAKE
SIO_010081: F0161_RS11130
subclass of: SO_0000673
so part of: F0161_RS11130
location: 7247..7492
location: region:7247-7492:1
so has part: feature:7247-7492:1:exon

WP_125710718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7247-7492:1:exon

F0161_RS11135
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11135
old locus tag: F0161_11135
so part of: sequence
location: 7496..8398
location: region:7496-8398:1
so has part: feature:7496-8398:1:exon
subclass of: SO_0000010

position:7496:1
position: 7496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8398:1
position: 8398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7496-8398:1:exon

F0161_RS11135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11135
old locus tag: F0161_11135
EC number: 2.3.1.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014082430.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ACP S-malonyltransferase
translation: MAKTAYLFAGQGAQTLGMGQDLYREEPSYRQTVTQASDILGINLADPEVAAAPENTQVAILTMSYGIWRLIAPTAATPVGLVGLSLGEYSALVAAGSLSFEDGLRLVADRSRYMAAAGHETPGKMAAVLTDQQTIVQELCDKIDGVYIANYNTLNQLVVGGTPEAVKQLKQALKDHKIRVVPLKVAVSSHTPLMASASEKLGQRLETVAFTAPKWPVWSNTTGQPFAVEHLAATLVDQLVAPTHFYDDFRGLTAAGADQFVEIGPGHVLSGFAKQIAPAAKRYQINDMTTLNAVRSELGW
SIO_010081: F0161_RS11135
subclass of: SO_0000673
so part of: F0161_RS11135
location: 7496..8398
location: region:7496-8398:1
so has part: feature:7496-8398:1:exon

WP_041095673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7496-8398:1:exon

F0161_RS11140
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
gene: fabG
locus tag: F0161_RS11140
old locus tag: F0161_11140
so part of: sequence
location: 8405..9124
location: region:8405-9124:1
so has part: feature:8405-9124:1:exon
subclass of: SO_0000010

position:8405:1
position: 8405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9124:1
position: 9124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8405-9124:1:exon

F0161_RS11140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
gene: fabG
locus tag: F0161_RS11140
old locus tag: F0161_11140
EC number: 1.1.1.100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012212322.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoacyl-ACP reductase FabG
translation: MADGVVLITGGNRGIGLAIAERLAGDGENVVITTRHELPESQLAALDALGIHTVVGDVTDEAEAQRMVNDAVKHGEWLRGLINNAGINRDKLMTRMSTEDFNAVLQTNLVGAFNMSKPALKLMQKQRQGSIIHMASVVGLTGNVGQANYAASKAGLIGLMKTIAKEGGLRQVRSNAIAPGMVETDMTDALSDKTKEAILAEIPAKRFAKPAEIADVCAFLLNNEYVTGQVITIDGGLTL
SIO_010081: F0161_RS11140
subclass of: SO_0000673
so part of: F0161_RS11140
location: 8405..9124
location: region:8405-9124:1
so has part: feature:8405-9124:1:exon

WP_041095675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8405-9124:1:exon

F0161_RS11145
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
gene: fabF
locus tag: F0161_RS11145
old locus tag: F0161_11145
so part of: sequence
location: 9134..10354
location: region:9134-10354:1
so has part: feature:9134-10354:1:exon
subclass of: SO_0000010

position:9134:1
position: 9134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10354:1
position: 10354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9134-10354:1:exon

F0161_RS11145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
gene: fabF
locus tag: F0161_RS11145
old locus tag: F0161_11145
EC number: 2.3.1.179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003625246.1
GO function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase II
translation: MERVVVTGMGAVTPLGNDAKTFLNGVADSRVGIAPITKFTADTGITVAGEVKDFEATKRLSAKTAKRMDLFSQYALYSAIEAMENAGLEPDNVVSEDFGVIYGSGIGGLTTIQEQVIKMHDKGPKRVSPLFVSNSIINMAAGNLSIYFKAENISEAVVTACASATNAIGDAFEQIKLGRAQVMMTGGSEASVNEIGIAGFAALTALSKSTDPLKASMPFDVNRNGFVMGEGGATLILESLTHARARNAPILAEIVGYGRTSDAYHVTAPDPSGKGAKRAMSQAISEAGIKPKDVGYINAHGTATKANDAGEARAIADLFGQDVLVSSTKGMTGHLLGAAGAIEAVATIGALNGQLPQNVGVYDQDPETPVTLVNADNAHQQVNYALSNSFGFGGHNAVIAFKRWEG
SIO_010081: F0161_RS11145
subclass of: SO_0000673
so part of: F0161_RS11145
location: 9134..10354
location: region:9134-10354:1
so has part: feature:9134-10354:1:exon

WP_041095677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9134-10354:1:exon

F0161_RS11150
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11150
old locus tag: F0161_11150
so part of: sequence
location: 10357..10782
location: region:10357-10782:1
so has part: feature:10357-10782:1:exon
subclass of: SO_0000010

position:10357:1
position: 10357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10782:1
position: 10782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10357-10782:1:exon

F0161_RS11150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11150
old locus tag: F0161_11150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010738136.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin/lipoyl-containing protein
translation: MNEQEIERLVDKFERSSLNEMQISDNNFKLLLTKPHHSNAANSAAPVATSAPVQTAEAPTEDDAVVPAPLVGLVYLAAQPGKPVFKSVGDQVKAGDVVCLIEAMKVVNEVKSPYDGILREVLVEDGSLVEYDQPLFRIEKN
SIO_010081: F0161_RS11150
subclass of: SO_0000673
so part of: F0161_RS11150
location: 10357..10782
location: region:10357-10782:1
so has part: feature:10357-10782:1:exon

WP_041095678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10357-10782:1:exon

F0161_RS11155
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11155
old locus tag: F0161_11155
so part of: sequence
location: 10784..11200
location: region:10784-11200:1
so has part: feature:10784-11200:1:exon
subclass of: SO_0000010

position:10784:1
position: 10784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11200:1
position: 11200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10784-11200:1:exon

F0161_RS11155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11155
old locus tag: F0161_11155
EC number: 4.2.1.-
inference: COORDINATES: protein motif:HMM:NF019589.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-hydroxyacyl-ACP dehydratase FabZ family protein
translation: MDIKDVIPQRPPFLFIDEIKAVEPGVGADTTKLVTINEWYFRGQPNDKVAPMFMLLEMMAQTGALAILSDQAAGKNVLFGGVKAAEYTVAVHPGDQLDCHVALLKQRHGIGIGSGEIKVDGQVVFSATLIFAIVETEE
SIO_010081: F0161_RS11155
subclass of: SO_0000673
so part of: F0161_RS11155
location: 10784..11200
location: region:10784-11200:1
so has part: feature:10784-11200:1:exon

WP_041095680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10784-11200:1:exon

F0161_RS11160
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11160
old locus tag: F0161_11160
so part of: sequence
location: 11206..12579
location: region:11206-12579:1
so has part: feature:11206-12579:1:exon
subclass of: SO_0000010

position:11206:1
position: 11206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12579:1
position: 12579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11206-12579:1:exon

F0161_RS11160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11160
old locus tag: F0161_11160
EC number: 6.4.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011475767.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase biotin carboxylase subunit
translation: MFKKVLVANRGEIAVQVIRNLHEMAIEAVAVYSTADRDAYFVELADEAVCIGAPLPEQSYLDMKSIVTVACLLGCDAVHPGYGFLSENAEFVVLCQEVGLTFIGPQSETVALMGDKASAREVMQAAGVPVIPGSDGTISDLNAALTLAEKIGYPVMLKSAAGGGGKGMRRVDDKAALTVAFEDVKRESQLSFGETGIYLEKVIEHAKHIEMQVIADDFGHVVYFPERDCSPQRHHQKLVEESPSSLISAERRAELGAIVVKACQSVNYRNTGTFEFLMDPDQRFYFMEMNTRLQVEHTVSEEVTGVEMIKAQVLVAAHQPLPFDQADVQVTQFAVECRINAENPAAQFMPAAGDVTGLFLPVGTHGVRIDTGLREVDTISPYYDSMIAKLVTSGSNRAAALKKMQRLLTELKVTGLTTNQAFLVDLVASPEFVADEVTIESVEQTILPRWLDDASKV
SIO_010081: F0161_RS11160
subclass of: SO_0000673
so part of: F0161_RS11160
location: 11206..12579
location: region:11206-12579:1
so has part: feature:11206-12579:1:exon

WP_041095682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11206-12579:1:exon

F0161_RS11165
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11165
old locus tag: F0161_11165
so part of: sequence
location: 12560..13393
location: region:12560-13393:1
so has part: feature:12560-13393:1:exon
subclass of: SO_0000010

position:12560:1
position: 12560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13393:1
position: 13393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12560-13393:1:exon

F0161_RS11165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11165
old locus tag: F0161_11165
EC number: 2.1.3.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011667652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase carboxyltransferase subunit beta
translation: MMPAKFNGLDKSTLAKRMDKIPSDLYVTCPYCKQSVYHQKLGPFQECPHCGYGFRLGAAARLKIVTDKFEAFDAELAVDPALVDDQYAEKLTKAKQHSGLPESVVTGMATIDSLQVAIGVMDSNFMMGSLGSATGEKLTRLFEEATRRRLPVVLYTASGGARMQEGLHSLMQMAKVTQAVTAHGEAGLCYLVVLTDPTTGGVTASFAMEADITLAEPHALIGFTGRRVIESTLHIKPPADFQRAETLLANGFVDDIVARSAQKATIVSLLKLSQGGA
SIO_010081: F0161_RS11165
subclass of: SO_0000673
so part of: F0161_RS11165
location: 12560..13393
location: region:12560-13393:1
so has part: feature:12560-13393:1:exon

WP_041095684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12560-13393:1:exon

F0161_RS11170
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11170
old locus tag: F0161_11170
so part of: sequence
location: 13394..14164
location: region:13394-14164:1
so has part: feature:13394-14164:1:exon
subclass of: SO_0000010

position:13394:1
position: 13394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14164:1
position: 14164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13394-14164:1:exon

F0161_RS11170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11170
old locus tag: F0161_11170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003640418.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxyltransferase subunit alpha
translation: MSENAAYDIVQAARSQSKIDSYTLINGVFSDFHELHGDRLHGDDSALIGGVGRLNGRPVTILATNKGRDMAEGQATHFGGVSPDGYRKAIRLMKQSTKFNRPIVALINTPGAYPGVEAEYGGQGEAIARSIQTGLGQPVPYLSLIFGEAGSGGALALATGDEVWMLEKSTYSVVSPEGYASILWRDGKLADQAAAKMKLTPSELLAAGFVDRVLPEVTTPETLSALTTQLDLKITALAKLPVAELMAARRQRYRQF
SIO_010081: F0161_RS11170
subclass of: SO_0000673
so part of: F0161_RS11170
location: 13394..14164
location: region:13394-14164:1
so has part: feature:13394-14164:1:exon

WP_041095686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13394-14164:1:exon

F0161_RS11175
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
gene: fabI
locus tag: F0161_RS11175
old locus tag: F0161_11175
so part of: sequence
location: 14189..14944
location: region:14189-14944:1
so has part: feature:14189-14944:1:exon
subclass of: SO_0000010

position:14189:1
position: 14189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14944:1
position: 14944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14189-14944:1:exon

F0161_RS11175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
gene: fabI
locus tag: F0161_RS11175
old locus tag: F0161_11175
EC number: 1.3.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008842116.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: enoyl-ACP reductase FabI
translation: MDVVTGKTIVIMGVANKSSIAWGCAQAIQENGGQVILTYQNERIKRILERFVPEEMPMIQCDVSDEETVVQAFTTIKDQYGHVDGLIHAIAYADKESLENPVLQISKEGYNLAQDVSAYSFILVSRLATEIFPDLTSLVTLTYFGSTHVIPNYNIMGVAKAALEANVRYLAKELGDRHVRVNAISAGAVKTLAVTGVKNSSTLLKMSQERTVDGVSVTKSEIGNVATFLLSDLSTAITGDVIYADKGVHLI
SIO_010081: F0161_RS11175
subclass of: SO_0000673
so part of: F0161_RS11175
location: 14189..14944
location: region:14189-14944:1
so has part: feature:14189-14944:1:exon

WP_150204704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14189-14944:1:exon

F0161_RS11180
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11180
old locus tag: F0161_11180
so part of: sequence
location: 14954..15763
location: region:14954-15763:1
so has part: feature:14954-15763:1:exon
subclass of: SO_0000010

position:14954:1
position: 14954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15763:1
position: 15763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14954-15763:1:exon

F0161_RS11180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11180
old locus tag: F0161_11180
EC number: 6.3.4.15
inference: COORDINATES: protein motif:HMM:TIGR00121.1
GO function: GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biotin--[acetyl-CoA-carboxylase] ligase
translation: MRDDLKATVIRENLPSQWLVDPRVTVLPSVDSTNTYAKQRLNHRPEIVVAERQTAGKGRFHHRFVSPAQSGIYLTIVWPLNDQADGGLEAARAAVAVVQAVAAVTGLELAIKWPNDLVFRHQKRGGLLIEQVQTSAGWQLLIGIGLNLAATDVPALPVSLTLADTPNQQWTRNQVIAAIYGQLTALFQQPAATWLAVYRQSVLWVGERVQFNVSGQAMIGILQGFDPHNRLQVQPQTGPLLVLEAERVSELMPLDQDYQKPNEPSNDFT
SIO_010081: F0161_RS11180
subclass of: SO_0000673
so part of: F0161_RS11180
location: 14954..15763
location: region:14954-15763:1
so has part: feature:14954-15763:1:exon

WP_041095690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14954-15763:1:exon

F0161_RS11185
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11185
old locus tag: F0161_11185
so part of: sequence
location: 15922..16110
location: region:15922-16110:1
so has part: feature:15922-16110:1:exon
subclass of: SO_0000010

position:15922:1
position: 15922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16110:1
position: 16110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15922-16110:1:exon

F0161_RS11185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11185
old locus tag: F0161_11185
inference: COORDINATES: protein motif:HMM:NF016174.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDEIGQIIFNHEIVANASDFNMGIEVETIRVDAASKLTTEPYPKLLGDQRQNHFIKTDGRL
SIO_010081: F0161_RS11185
subclass of: SO_0000673
so part of: F0161_RS11185
location: 15922..16110
location: region:15922-16110:1
so has part: feature:15922-16110:1:exon

WP_225420795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15922-16110:1:exon

F0161_RS11190
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11190
old locus tag: F0161_11190
so part of: sequence
location: 16198..17109
location: region:16198-17109:1
so has part: feature:16198-17109:1:exon
subclass of: SO_0000010

position:16198:1
position: 16198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17109:1
position: 17109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16198-17109:1:exon

F0161_RS11190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11190
old locus tag: F0161_11190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MSSITYSERIKIETFCELGLSNIQMGVRLNRSPSTISYELSRCQPYQAELAQTDAEYKRSRCGRKTKLSDELKQKILNHLRLSWSPGMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRQRSKYNQSLGRSIEQRPMMINQRKRIGDFELDTVVGPRGHSKAVLLTLIDRKSRFLWAYRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVLLESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
SIO_010081: F0161_RS11190
subclass of: SO_0000673
so part of: F0161_RS11190
location: 16198..17109
location: region:16198-17109:1
so has part: feature:16198-17109:1:exon

WP_150204705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16198-17109:1:exon

F0161_RS11195
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11195
old locus tag: F0161_11195
so part of: sequence
location: 17168..17425
location: region:17168-17425:1
so has part: feature:17168-17425:1:exon
subclass of: SO_0000010

position:17168:1
position: 17168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17425:1
position: 17425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17168-17425:1:exon

F0161_RS11195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11195
old locus tag: F0161_11195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010011628.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEADRCVREDDLEKALQIQLKINDLISELTSFKGNLYDVMKLILAKRGVSVGRARNPLPHVEDDEMDHVEVVRQHIDDAIAEFTK
SIO_010081: F0161_RS11195
subclass of: SO_0000673
so part of: F0161_RS11195
location: 17168..17425
location: region:17168-17425:1
so has part: feature:17168-17425:1:exon

WP_029508047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17168-17425:1:exon

F0161_RS11200
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11200
old locus tag: F0161_11200
so part of: sequence
location: complement(17468..18802)
location: region:17468-18802:-1
so has part: feature:17468-18802:-1:exon
subclass of: SO_0000010

position:17468:-1
position: 17468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18802:-1
position: 18802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17468-18802:-1:exon

F0161_RS11200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11200
old locus tag: F0161_11200
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017260795.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)/FAD-dependent oxidoreductase
translation: MTESYQFDVLYLGAGHGAFDGAVPLANSGKKVAIIEADKIGGTCPNRGCNAKITLDNPVQLLRHQERLDGIVNGDLKLDWTANVEHEHEVIDGLPDMITGLLDSVDIEIIHGRGKFVDAHTIEVDQQRYTADKIVIATGLRPHHLDVMGSELTHDSTDFMNLKQLPENIVIIGAGYIGMEFATIANAAGANVTVLLRHNRALRKFNQDYVKQVIADLEKRGVKFIYNAQVDRFEEDGSHFTVSYNDHETLTTDWILDATGRIPNIENIGLDEVGVSYNANGIEVNDHLQTNIDNIYASGDVLDKEQPKLTPTAIFESSYLTQLFTGKTTDAINYPPIPTIVFTSPQIAQVGMSVEEAQQNPDYTIKTNHLPDGWFRQVDKETIGDNTLIYDQDHHLVGAAEVSEHAADAINVLLPAIEFQYTAEQLGRIVPLFPTLGADVWSQI
SIO_010081: F0161_RS11200
subclass of: SO_0000673
so part of: F0161_RS11200
location: complement(17468..18802)
location: region:17468-18802:-1
so has part: feature:17468-18802:-1:exon

WP_002831210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17468-18802:-1:exon

F0161_RS11205
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11205
old locus tag: F0161_11205
so part of: sequence
location: complement(18955..19485)
location: region:18955-19485:-1
so has part: feature:18955-19485:-1:exon
subclass of: SO_0000010

position:18955:-1
position: 18955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19485:-1
position: 19485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18955-19485:-1:exon

F0161_RS11205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11205
old locus tag: F0161_11205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005919347.1
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MFQGVGNFAITGYILYIMTDFLHRGNQTQSSIQLVNMIMLIFGILMGLVAGPLSNKFKILKLPVGLSTILLAIAGLSLFFLRNNTGIILYALAAGLGMGLWNALDNLLNLKVIPDQNRVAFFLGVYNLGNTITQAIAPVLAAAVISLFGYSGIFIVSFIFSLIGGISMLSIKSLKR
SIO_010081: F0161_RS11205
subclass of: SO_0000673
so part of: F0161_RS11205
location: complement(18955..19485)
location: region:18955-19485:-1
so has part: feature:18955-19485:-1:exon

WP_005919347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18955-19485:-1:exon

F0161_RS11210
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11210
old locus tag: F0161_11210
so part of: sequence
location: complement(19500..19832)
location: region:19500-19832:-1
so has part: feature:19500-19832:-1:exon
subclass of: SO_0000010

position:19500:-1
position: 19500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19832:-1
position: 19832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19500-19832:-1:exon

F0161_RS11210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11210
old locus tag: F0161_11210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLGFFSSWLFKSGLSFAPEDGKGTASSAYGGLGMALGNNGFNVIGALFLSQFRLGFIVFGIFTFAGVLIATLIVHEPSNLDETSTKKKEKFSLKNVKLIFPSWQIGATTT
SIO_010081: F0161_RS11210
subclass of: SO_0000673
so part of: F0161_RS11210
location: complement(19500..19832)
location: region:19500-19832:-1
so has part: feature:19500-19832:-1:exon

WP_225416436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19500-19832:-1:exon

F0161_RS11215
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11215
old locus tag: F0161_11215
pseudo: true
so part of: sequence
location: 20063..>20152
location: region:20063-20152:1
so has part: feature:20063-20152:1:exon
subclass of: SO_0000010

position:20063:1
position: 20063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20152:1
position: 20152
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20063-20152:1:exon

F0161_RS11215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11215
old locus tag: F0161_11215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015474630.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: F0161_RS11215
subclass of: SO_0000673
so part of: F0161_RS11215
location: 20063..>20152
location: region:20063-20152:1
so has part: feature:20063-20152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20063-20152:1:exon

F0161_RS11220
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11220
old locus tag: F0161_11220
so part of: sequence
location: 20151..20336
location: region:20151-20336:1
so has part: feature:20151-20336:1:exon
subclass of: SO_0000010

position:20151:1
position: 20151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20336:1
position: 20336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20151-20336:1:exon

F0161_RS11220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11220
old locus tag: F0161_11220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013439918.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MLVGLKQLAQKEALTTALRKIKHTKNRQISQAFSHTYLVGAVIVLILSPIALLTDRKPLKS
SIO_010081: F0161_RS11220
subclass of: SO_0000673
so part of: F0161_RS11220
location: 20151..20336
location: region:20151-20336:1
so has part: feature:20151-20336:1:exon

WP_164504793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20151-20336:1:exon

F0161_RS11225
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11225
old locus tag: F0161_11225
so part of: sequence
location: 20508..21563
location: region:20508-21563:1
so has part: feature:20508-21563:1:exon
subclass of: SO_0000010

position:20508:1
position: 20508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21563:1
position: 21563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20508-21563:1:exon

F0161_RS11225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11225
old locus tag: F0161_11225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008212902.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MILKKFDYKTLNNLEITASMNDKLNQIYELKGRLSATSMTYKEALDHLVNVAKVQSTDASNRIEGIYTSNTRLKQLVHQKTSPRNRSEAEIAGYRDVLALIHEQYAYIPINNSSILTLHKRLFSYTNSTWGGQFKDSDNQIITEYADGRQEVRFQPPAAYLTPKLVQELCINYNLAVDQQTFSPLILLGAFIFDFVSIHPFRDGNGRMSRLLMLLTMYQVQLNVGKYISLENLIEKTKQSYYEVLKQSSLNWQNNQNDYAPFLDYFLGVILQAYRNLNDRLNLVQDKPVSATDLILTTLTQELKPLSRSELTALIPQYSDITIKRALSELKKRQRIKLIGKGRSSKYILKN
SIO_010081: F0161_RS11225
subclass of: SO_0000673
so part of: F0161_RS11225
location: 20508..21563
location: region:20508-21563:1
so has part: feature:20508-21563:1:exon

WP_150204706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20508-21563:1:exon

F0161_RS11230
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11230
old locus tag: F0161_11230
so part of: sequence
location: 21777..22016
location: region:21777-22016:1
so has part: feature:21777-22016:1:exon
subclass of: SO_0000010

position:21777:1
position: 21777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22016:1
position: 22016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21777-22016:1:exon

F0161_RS11230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11230
old locus tag: F0161_11230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKSIWEMDAPIGLAFFFGPALIIGIMMLTSGFNTVSAIMVLVLVLCGLKYMHTSIIGKYRIMKSIVNSIHLKNGPLSIK
SIO_010081: F0161_RS11230
subclass of: SO_0000673
so part of: F0161_RS11230
location: 21777..22016
location: region:21777-22016:1
so has part: feature:21777-22016:1:exon

WP_150204707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21777-22016:1:exon

F0161_RS11235
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11235
old locus tag: F0161_11235
so part of: sequence
location: complement(22043..22921)
location: region:22043-22921:-1
so has part: feature:22043-22921:-1:exon
subclass of: SO_0000010

position:22043:-1
position: 22043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22921:-1
position: 22921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22043-22921:-1:exon

F0161_RS11235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11235
old locus tag: F0161_11235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680947.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIVERTVGKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKTKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA
SIO_010081: F0161_RS11235
subclass of: SO_0000673
so part of: F0161_RS11235
location: complement(22043..22921)
location: region:22043-22921:-1
so has part: feature:22043-22921:-1:exon

WP_105310504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22043-22921:-1:exon

F0161_RS11240
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11240
old locus tag: F0161_11240
so part of: sequence
location: complement(22945..23232)
location: region:22945-23232:-1
so has part: feature:22945-23232:-1:exon
subclass of: SO_0000010

position:22945:-1
position: 22945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23232:-1
position: 23232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22945-23232:-1:exon

F0161_RS11240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11240
old locus tag: F0161_11240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015638790.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
SIO_010081: F0161_RS11240
subclass of: SO_0000673
so part of: F0161_RS11240
location: complement(22945..23232)
location: region:22945-23232:-1
so has part: feature:22945-23232:-1:exon

WP_003688751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22945-23232:-1:exon

F0161_RS11245
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11245
old locus tag: F0161_11245
so part of: sequence
location: 23360..23803
location: region:23360-23803:1
so has part: feature:23360-23803:1:exon
subclass of: SO_0000010

position:23360:1
position: 23360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23803:1
position: 23803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23360-23803:1:exon

F0161_RS11245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11245
old locus tag: F0161_11245
inference: COORDINATES: protein motif:HMM:NF017026.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyltransferase domain-containing protein
translation: MLQFNRQAANISEIIGIDIWSNKDQGSNSIAATQKIMENSNLADKVKLKTANILNMPFNDNEFDLIVSSLVLHNIKPFEKRKAALVNIARVQKQKGQLVIMDIGYETSKYVRILKDLEYQNVNIANTGYNGWWGTPMVPTFVITATK
SIO_010081: F0161_RS11245
subclass of: SO_0000673
so part of: F0161_RS11245
location: 23360..23803
location: region:23360-23803:1
so has part: feature:23360-23803:1:exon

WP_150204708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23360-23803:1:exon

F0161_RS11645
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11645
old locus tag: F0161_11250
pseudo: true
so part of: sequence
location: complement(23812..24370)
location: region:23812-24370:-1
so has part: feature:23812-24370:-1:exon
subclass of: SO_0000010

position:23812:-1
position: 23812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24370:-1
position: 24370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23812-24370:-1:exon

F0161_RS11645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11645
old locus tag: F0161_11250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002827222.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
SIO_010081: F0161_RS11645
subclass of: SO_0000673
so part of: F0161_RS11645
location: complement(23812..24370)
location: region:23812-24370:-1
so has part: feature:23812-24370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23812-24370:-1:exon

F0161_RS11255
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11255
old locus tag: F0161_11255
so part of: sequence
location: 24569..25774
location: region:24569-25774:1
so has part: feature:24569-25774:1:exon
subclass of: SO_0000010

position:24569:1
position: 24569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25774:1
position: 25774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24569-25774:1:exon

F0161_RS11255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11255
old locus tag: F0161_11255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYLNKKDYLYTENDPQASKEDTLSLLDRVTEQNELLKNIKKEFPLNEDLNIGGTKLAINVFHEIDNKKYDYNLSLNNLENINFKRVATGKNNYRIVFSVVSEEDKKTLIPNVETIYDAKKKLLDLLLEINKFSDFMLKNDKRKELVDELASLSKDSDINNKIFNFRFISSKDGDNEFLRSVVTQSRYKTYDNPIILYISLILIHNLSKDIDKDFYLNSMHVSDSKLNASFLEKSGTKIDEGIIVTTGLIVSNSELGDGAAKFNAVYKVENKDGKKVTVMRDELATINHGNNPDTIKAKLKGLGNLEQNRKDTILAVKEIKWSKEVTEKDVLKLMTLISHVRNIPSKLKDSMTKSIDQIDLTKQAYNVLEIFDKLDGFLEKEDPDITLILESRFNKWLTKF
SIO_010081: F0161_RS11255
subclass of: SO_0000673
so part of: F0161_RS11255
location: 24569..25774
location: region:24569-25774:1
so has part: feature:24569-25774:1:exon

WP_150204709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24569-25774:1:exon

F0161_RS11650
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11650
pseudo: true
so part of: sequence
location: complement(25986..>26144)
location: region:25986-26144:-1
so has part: feature:25986-26144:-1:exon
subclass of: SO_0000010

position:25986:-1
position: 25986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26144:-1
position: 26144
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25986-26144:-1:exon

F0161_RS11650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11650
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611796.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: F0161_RS11650
subclass of: SO_0000673
so part of: F0161_RS11650
location: complement(25986..>26144)
location: region:25986-26144:-1
so has part: feature:25986-26144:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25986-26144:-1:exon

F0161_RS11260
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11260
old locus tag: F0161_11260
so part of: sequence
location: complement(26173..26874)
location: region:26173-26874:-1
so has part: feature:26173-26874:-1:exon
subclass of: SO_0000010

position:26173:-1
position: 26173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26874:-1
position: 26874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26173-26874:-1:exon

F0161_RS11260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11260
old locus tag: F0161_11260
inference: COORDINATES: protein motif:HMM:NF033563.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30 family transposase
translation: MKNHGNSLREIASCIKKSGSTICRELNRNSDHDHYSPSKAQTKNQRRKSNCGRTSLLSQPQVFEVVIEHFCEDLWSPEEIANRLAVEKHAVQISTTTIYRGIFKGLFDYLFKSGSPSAVRHLRHHGKFRHNKTYQEKRGKIPIPNKIHDRPREADNRLEIGHWEGDTVLGKSGRACVVTLVDRKSRYLLIGKASQRTAGAVTDTLSHLMKLWSGRSLTITPDRGKIRQGSMLN
SIO_010081: F0161_RS11260
subclass of: SO_0000673
so part of: F0161_RS11260
location: complement(26173..26874)
location: region:26173-26874:-1
so has part: feature:26173-26874:-1:exon

WP_263862657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26173-26874:-1:exon

F0161_RS11265
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11265
old locus tag: F0161_11265
so part of: sequence
location: complement(27044..27703)
location: region:27044-27703:-1
so has part: feature:27044-27703:-1:exon
subclass of: SO_0000010

position:27044:-1
position: 27044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27703:-1
position: 27703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27044-27703:-1:exon

F0161_RS11265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11265
old locus tag: F0161_11265
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTEEYSSLATVKQQVAEKIQSNIRIKEKLLTAIKDVHTIDDLTNLLDYKVKLKNNSSKELQKVERLRKIQYESLNKKYILPQKRQGRNAIFTEDKNDIVSKFRLAGIIKYRTVSLNVVRDPKNEMKSAMWDTICSTWKQEMTDWINNNDFRISNDEMKANKIKFDFLDNSDHHHSKFSNDMLKSLNNDINSEFQFIKYSNGEITEAAKNIVVIDLSGEP
SIO_010081: F0161_RS11265
subclass of: SO_0000673
so part of: F0161_RS11265
location: complement(27044..27703)
location: region:27044-27703:-1
so has part: feature:27044-27703:-1:exon

WP_150204710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27044-27703:-1:exon

F0161_RS11270
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11270
old locus tag: F0161_11270
so part of: sequence
location: complement(27705..28334)
location: region:27705-28334:-1
so has part: feature:27705-28334:-1:exon
subclass of: SO_0000010

position:27705:-1
position: 27705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28334:-1
position: 28334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27705-28334:-1:exon

F0161_RS11270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11270
old locus tag: F0161_11270
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNSSTQDQDTDVIDALKNLSKKTFSTIPLGTMKETSVTDNILSEIQLKYTKADVIQYDDSYKETGKKDDNEKTRTCADYILIIKDKNGDLHKLAFQAKNGKKDDNDTIGNIYKEITHKIGNKGDYQIDEYHNFLVSSNITGYYIFYNGNFENITNLVSQNQLDNKSFWILDEKTVKSKMGPNHKMLSLDDIVNEQSHLEFTKFLKGQL
SIO_010081: F0161_RS11270
subclass of: SO_0000673
so part of: F0161_RS11270
location: complement(27705..28334)
location: region:27705-28334:-1
so has part: feature:27705-28334:-1:exon

WP_150204711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27705-28334:-1:exon

F0161_RS11275
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11275
old locus tag: F0161_11275
so part of: sequence
location: complement(28475..29059)
location: region:28475-29059:-1
so has part: feature:28475-29059:-1:exon
subclass of: SO_0000010

position:28475:-1
position: 28475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29059:-1
position: 29059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28475-29059:-1:exon

F0161_RS11275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11275
old locus tag: F0161_11275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014567995.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQHLDRQLAALKGVDKLFTDKLSGANTNRPELQKMLAYIREGDIVLVTELDRLGRSNQDLTKIMNTIQNEGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIERQQQGIILAKQQGKYHGRKPQYAQDDPRLQHAFKLYQAGMSDVDVARNTGIKRTTFTRYRKRFDIQR
SIO_010081: F0161_RS11275
subclass of: SO_0000673
so part of: F0161_RS11275
location: complement(28475..29059)
location: region:28475-29059:-1
so has part: feature:28475-29059:-1:exon

WP_150204712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28475-29059:-1:exon

F0161_RS11655
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11655
old locus tag: F0161_11280
so part of: sequence
location: complement(29165..29500)
location: region:29165-29500:-1
so has part: feature:29165-29500:-1:exon
subclass of: SO_0000010

position:29165:-1
position: 29165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29500:-1
position: 29500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29165-29500:-1:exon

F0161_RS11655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11655
old locus tag: F0161_11280
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQIDKLTLKDVATTNRQYLETIFALGDGHMGVRDSVPFTGNQQATLPVMLINGYYATNPITYGESAYQEAPLHLNFTAPEDLSKMVNGNQNVINSRLNTDNLGKGEFFPFQ
SIO_010081: F0161_RS11655
subclass of: SO_0000673
so part of: F0161_RS11655
location: complement(29165..29500)
location: region:29165-29500:-1
so has part: feature:29165-29500:-1:exon

WP_150204713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29165-29500:-1:exon

F0161_RS11285
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11285
old locus tag: F0161_11285
so part of: sequence
location: complement(29748..30725)
location: region:29748-30725:-1
so has part: feature:29748-30725:-1:exon
subclass of: SO_0000010

position:29748:-1
position: 29748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30725:-1
position: 30725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29748-30725:-1:exon

F0161_RS11285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11285
old locus tag: F0161_11285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011102207.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LacI family DNA-binding transcriptional regulator
translation: MKPTIKDIAAKTGFSIATVSRVLAKKQGTYSDKTQERILKVAKDLGYRKNTLAMELVKKMTDVIAVIVNVTPTNFSSGIIDGIQQRATEIGLQVIILYAGNRNTELQHQAIVTALERTVSGILLMAIEPDKADLQLLTESKTPFCFVSINLADERVKSVSSDNYQAAYLATKYLISHGHRTIGLAGIDHYHTGSQRLAGYQAALKDYSIHGQAEWVQPGDYSYQAGYNVFNAYQELGITGVVAASDMTAAGLQKAAQESNVKLPGALSVVSIDGTLICDIATPALTSVTQNFVQIGIESVNCLVGKSATRLVPVTLVERESVTTI
SIO_010081: F0161_RS11285
subclass of: SO_0000673
so part of: F0161_RS11285
location: complement(29748..30725)
location: region:29748-30725:-1
so has part: feature:29748-30725:-1:exon

WP_150204714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29748-30725:-1:exon

F0161_RS11290
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11290
old locus tag: F0161_11290
so part of: sequence
location: 30895..32316
location: region:30895-32316:1
so has part: feature:30895-32316:1:exon
subclass of: SO_0000010

position:30895:1
position: 30895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32316:1
position: 32316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30895-32316:1:exon

F0161_RS11290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11290
old locus tag: F0161_11290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003645671.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SLC45 family MFS transporter
translation: MNKPAVHPNKPIADVSSKPKTSTIANSLPNLPLKTIFAITFGFCGVNMAFSLQSSQMSRIFQTIGADPTKLGLFFILPPLAGLLVQPLVGKYSDRTWTRFGRRMPYLLFSAPLAALVMVLLPNAGSFGFGYASTAALLFGAIAILFMDLSSNVCMQPFRMIIGDMVNENQKDKAWSWQQAFSNLGGVLATILPFVLTYFGVANTAQKGVVPLSVKIAFYIGAILLLGISAYTIHTVKEYDPDTYALYHHIDPEQHKHTKPIWQLVKEAPKAFWEVALVQLFAWIGIQYMWTYTTGAIAENVWHTTNASSAGYQAAGNWYGILTFIQSMAAVLYGFLVLSRTNPYKRKFWYRFGLASFAVGLVWVFFIHNQYLLIAPFCLIGIGFFTVHVEPFNIFTSSLDGANEGSYIGIFNGTICLPQILASVASFMVFKFVGNSMPGMMLIAGISMFIAVLAISIIKQDKPQEDLSENPTK
SIO_010081: F0161_RS11290
subclass of: SO_0000673
so part of: F0161_RS11290
location: 30895..32316
location: region:30895-32316:1
so has part: feature:30895-32316:1:exon

WP_150204715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30895-32316:1:exon

F0161_RS11295
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11295
old locus tag: F0161_11295
so part of: sequence
location: 32347..34647
location: region:32347-34647:1
so has part: feature:32347-34647:1:exon
subclass of: SO_0000010

position:32347:1
position: 32347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34647:1
position: 34647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32347-34647:1:exon

F0161_RS11295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11295
old locus tag: F0161_11295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003645670.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 31 protein
translation: MSALPSYTQNGQTITFAFTQPLQLTIVTPEIIRVFINRGEQGDSYAIEGHKIQATDFTIESAGDHYIIRTSALTIHLDSERHLDTFDKDGNALITDYRGERIHLKGVDKVHERLVEAEGHSVTKAPTKSDQGYYEIIKSLAPDEYFYGLGDKTGYLNKRGFAYDNWNVDNPAPQLEILPNIYKSIPVMLGLKNGHPYGIFFDNTYQSHLDMGKESNHYYFYSAVQGNLDYYIIGGTTLKDIVTNYTYLTGRTPLPQKWTLGYQQSRWGYSASQEEVQAIADNLAKYDLPCDAIHFDVDYMDGYRVFTWDKDKYQGNPKKFITKLNQQGLKVIPIIDPGVKQDSDYHIYAEGLKKGYFVKSADGDVYINKVWPGNAAFPDFGRPEVRQWWANNGKFLTDLGVAGIWIDMNEPATFEGPIPDDVVFNDQDTPSTHKKMHNVYGHNMAKATYTGLKEQTGNRPFVITRAAYAGTQKYSTVWTGDNRSMWPHIQMMIPQLCNLGLSGFSFTGTDIGGFASDTTSELLTRWIEGAIFSPLLRNHAALGTRQQEPWAFGEPTLNIYRKYLKLRYRLIPYLYDLFAKETKTGLPIMRPVVLNYDQDPRVRDLNDEYMVGDDILVAPVVQKSQFKRLVYLPAGNWVDFWNGAEYAGNQDIVVDTPLDKLPLFVKQNTILPWGPAVSHISDEPLKAMTFRVFGTQGTYQHYQDNGRDFKYQSGEWNNYTITVDHNKVNVQLTHHGYQPVYQQITVELSDHVVKLTYDNDSSCYRE
SIO_010081: F0161_RS11295
subclass of: SO_0000673
so part of: F0161_RS11295
location: 32347..34647
location: region:32347-34647:1
so has part: feature:32347-34647:1:exon

WP_150204716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32347-34647:1:exon

F0161_RS11300
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11300
old locus tag: F0161_11300
so part of: sequence
location: complement(34746..35675)
location: region:34746-35675:-1
so has part: feature:34746-35675:-1:exon
subclass of: SO_0000010

position:34746:-1
position: 34746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35675:-1
position: 35675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34746-35675:-1:exon

F0161_RS11300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11300
old locus tag: F0161_11300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_053338758.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS30-like element ISLpl1 family transposase
translation: MSSITYSERIKIETFCELGLSNIQMGVRLNRLPSTISYELSRCQPYQAELAQTDAEYKRSRCGRKTKLSDELKQKILNHLRLSWSPGMIAHEFKLATKSIYNWLNQGRIDFSLNDLPEHGVRQRRNVDQRSKYNQSLGRSIEQRPMMINQRNRIGDFELDTVVGPRGHSKAILLTLIDRKSRFLWAYRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRDTEFSGLVSLESQYGIKTYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
SIO_010081: F0161_RS11300
subclass of: SO_0000673
so part of: F0161_RS11300
location: complement(34746..35675)
location: region:34746-35675:-1
so has part: feature:34746-35675:-1:exon

WP_150204717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34746-35675:-1:exon

F0161_RS11310
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11310
old locus tag: F0161_11310
so part of: sequence
location: complement(35818..36318)
location: region:35818-36318:-1
so has part: feature:35818-36318:-1:exon
subclass of: SO_0000010

position:35818:-1
position: 35818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36318:-1
position: 36318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35818-36318:-1:exon

F0161_RS11310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11310
old locus tag: F0161_11310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011101506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-CoA thioesterase
translation: MEPIHISQTLSISNHRVFSADLNEHDTVFGGKILATIDDNSSIAASRVARIETVTVSVDQANFLLPFRLQDSMCTESYVSGVGHRSIEVFTKIIGEHLKTGERFLGLTCFSTFVVTDRNIELPLLVADKPEYTFVAQGYQERQAARLAKLKRQQDFNAHISVELPW
SIO_010081: F0161_RS11310
subclass of: SO_0000673
so part of: F0161_RS11310
location: complement(35818..36318)
location: region:35818-36318:-1
so has part: feature:35818-36318:-1:exon

WP_150204718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35818-36318:-1:exon

F0161_RS11315
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11315
old locus tag: F0161_11315
pseudo: true
so part of: sequence
location: complement(36525..>36779)
location: region:36525-36779:-1
so has part: feature:36525-36779:-1:exon
subclass of: SO_0000010

position:36525:-1
position: 36525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36779:-1
position: 36779
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36525-36779:-1:exon

F0161_RS11315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11315
old locus tag: F0161_11315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011101505.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
SIO_010081: F0161_RS11315
subclass of: SO_0000673
so part of: F0161_RS11315
location: complement(36525..>36779)
location: region:36525-36779:-1
so has part: feature:36525-36779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36525-36779:-1:exon

F0161_RS11320
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11320
old locus tag: F0161_11320
so part of: sequence
location: complement(36838..37185)
location: region:36838-37185:-1
so has part: feature:36838-37185:-1:exon
subclass of: SO_0000010

position:36838:-1
position: 36838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37185:-1
position: 37185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36838-37185:-1:exon

F0161_RS11320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11320
old locus tag: F0161_11320
inference: COORDINATES: protein motif:HMM:NF025063.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: integrase core domain-containing protein
translation: MIYSLYPLLKVVSGISLHPQYTSDDYNQRLTELHIRHSYSRKGCLYDNAPMESFHASLKKECVYPVPVFEDYETAAAVLFEYVHAFYNRKRIHSSLGYQTPLQVEIATLTSQMAA
SIO_010081: F0161_RS11320
subclass of: SO_0000673
so part of: F0161_RS11320
location: complement(36838..37185)
location: region:36838-37185:-1
so has part: feature:36838-37185:-1:exon

WP_263862658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36838-37185:-1:exon

F0161_RS11325
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11325
old locus tag: F0161_11325
pseudo: true
so part of: sequence
location: 37313..38159
location: region:37313-38159:1
so has part: feature:37313-38159:1:exon
subclass of: SO_0000010

position:37313:1
position: 37313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38159:1
position: 38159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37313-38159:1:exon

F0161_RS11325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11325
old locus tag: F0161_11325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013355080.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS30 family transposase
SIO_010081: F0161_RS11325
subclass of: SO_0000673
so part of: F0161_RS11325
location: 37313..38159
location: region:37313-38159:1
so has part: feature:37313-38159:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37313-38159:1:exon

F0161_RS11330
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11330
old locus tag: F0161_11330
so part of: sequence
location: complement(38206..38550)
location: region:38206-38550:-1
so has part: feature:38206-38550:-1:exon
subclass of: SO_0000010

position:38206:-1
position: 38206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38550:-1
position: 38550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38206-38550:-1:exon

F0161_RS11330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11330
old locus tag: F0161_11330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010623286.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5388 domain-containing protein
translation: MANSLIRSNRNNTESSIPKPEKQAKASDFVNPAKDNPTNKEISSVTFNTNLKISNHTRNKLQAMSMIGYAENQRLSVETAIHSFYEQLSINEQKEFDLQVSTLESRDVKMKSKK
SIO_010081: F0161_RS11330
subclass of: SO_0000673
so part of: F0161_RS11330
location: complement(38206..38550)
location: region:38206-38550:-1
so has part: feature:38206-38550:-1:exon

WP_041095641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38206-38550:-1:exon

F0161_RS11335
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11335
old locus tag: F0161_11335
so part of: sequence
location: complement(38543..39352)
location: region:38543-39352:-1
so has part: feature:38543-39352:-1:exon
subclass of: SO_0000010

position:38543:-1
position: 38543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39352:-1
position: 39352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38543-39352:-1:exon

F0161_RS11335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11335
old locus tag: F0161_11335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010623287.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTQVITFGNFKGGVGKTSNSTMVALELSNRGYQTLLVDLDPQGNATNLYLKTKLNISNEVGHFKKTLMASIEDGDLSNSLINIKEHLDLLASAPDFALYPRYMEKHHEYLDRVTAFNTLLDPLKEKYDYIIIDIPPTISLITDSALYASDYCLIIMQTHEHSFEGAEAFIKYIQDEIVNEYKAPRLELVGILAVLLQAGAPVDEATVSNAISEFGEDNIFKNKIHSMQRLKRYGITGITFGSKFDKRVFDVYKNVTDELLSRIEVIEHG
SIO_010081: F0161_RS11335
subclass of: SO_0000673
so part of: F0161_RS11335
location: complement(38543..39352)
location: region:38543-39352:-1
so has part: feature:38543-39352:-1:exon

WP_150204719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38543-39352:-1:exon

F0161_RS11340
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11340
old locus tag: F0161_11340
so part of: sequence
location: 40283..40504
location: region:40283-40504:1
so has part: feature:40283-40504:1:exon
subclass of: SO_0000010

position:40283:1
position: 40283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40504:1
position: 40504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40283-40504:1:exon

F0161_RS11340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11340
old locus tag: F0161_11340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIRGLTYNYLKMFCQEYFGAEFPWEVDLGLLEEAKDQYILILLWSEFTHHVSSCPSGCKLIPETTFKRGYNE
SIO_010081: F0161_RS11340
subclass of: SO_0000673
so part of: F0161_RS11340
location: 40283..40504
location: region:40283-40504:1
so has part: feature:40283-40504:1:exon

WP_150204720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40283-40504:1:exon

F0161_RS11345
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11345
old locus tag: F0161_11345
pseudo: true
so part of: sequence
location: <40541..40752
location: region:40541-40752:1
so has part: feature:40541-40752:1:exon
subclass of: SO_0000010

position:40541:1
position: 40541
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:40752:1
position: 40752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40541-40752:1:exon

F0161_RS11345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11345
old locus tag: F0161_11345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552803.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: plasmid replication initiation protein
SIO_010081: F0161_RS11345
subclass of: SO_0000673
so part of: F0161_RS11345
location: <40541..40752
location: region:40541-40752:1
so has part: feature:40541-40752:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40541-40752:1:exon

F0161_RS11350
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11350
old locus tag: F0161_11350
so part of: sequence
location: 41012..41293
location: region:41012-41293:1
so has part: feature:41012-41293:1:exon
subclass of: SO_0000010

position:41012:1
position: 41012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41293:1
position: 41293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41012-41293:1:exon

F0161_RS11350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11350
old locus tag: F0161_11350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005693113.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAVKEKKRVQVKIDKDLADDTEAILSELGLNPTTAINMFYKRIVAKGALPFNASLSEEERANLRFLKATEGTPVTEFKDAKEVADWLNDPDED
SIO_010081: F0161_RS11350
subclass of: SO_0000673
so part of: F0161_RS11350
location: 41012..41293
location: region:41012-41293:1
so has part: feature:41012-41293:1:exon

WP_150204721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41012-41293:1:exon

F0161_RS11505
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11505
so part of: sequence
location: 41283..41789
location: region:41283-41789:1
so has part: feature:41283-41789:1:exon
subclass of: SO_0000010

position:41283:1
position: 41283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41789:1
position: 41789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41283-41789:1:exon

F0161_RS11505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002823700.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTNDLVSLYVSFVETNGGKSRPVLIRRVSEQTVEAFKITSQYENKSAYIKQRYYPIQDWQSAGLKKPSWVDLGNIYRFPKAGLNFKEIGHLSKLDQNKISDFTLDLKSKRRGKGQKIIQQRSSKRKHKESKAELTQRIQKQLKDFAKHNPEIKPKNNPENKNDRPSY
SIO_010081: F0161_RS11505
subclass of: SO_0000673
so part of: F0161_RS11505
location: 41283..41789
location: region:41283-41789:1
so has part: feature:41283-41789:1:exon

WP_190318943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41283-41789:1:exon

F0161_RS11360
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11360
old locus tag: F0161_11360
so part of: sequence
location: complement(41779..42057)
location: region:41779-42057:-1
so has part: feature:41779-42057:-1:exon
subclass of: SO_0000010

position:41779:-1
position: 41779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42057:-1
position: 42057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41779-42057:-1:exon

F0161_RS11360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11360
old locus tag: F0161_11360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNQYEKLVEQQARLKQKIDREYFKLRQSKYYENRQARKARSRRLIQKGALLEKYFQADNLSVEQTEELLKTFADYVNAHKPDKLKNDQPNN
SIO_010081: F0161_RS11360
subclass of: SO_0000673
so part of: F0161_RS11360
location: complement(41779..42057)
location: region:41779-42057:-1
so has part: feature:41779-42057:-1:exon

WP_150204722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41779-42057:-1:exon

F0161_RS11365
type: Gene
subclass of: SO_0000704
RO_0002162: 1296540
locus tag: F0161_RS11365
old locus tag: F0161_11365
so part of: sequence
location: complement(42080..42289)
location: region:42080-42289:-1
so has part: feature:42080-42289:-1:exon
subclass of: SO_0000010

position:42080:-1
position: 42080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42289:-1
position: 42289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42080-42289:-1:exon

F0161_RS11365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1296540
locus tag: F0161_RS11365
old locus tag: F0161_11365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013729135.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQSNLEKQEAKLKQLNQKIKVEKIKIEQRLGKQIISQANLDYANLSNDQIKLLAKQFSEFLKVKPVDH
SIO_010081: F0161_RS11365
subclass of: SO_0000673
so part of: F0161_RS11365
location: complement(42080..42289)
location: region:42080-42289:-1
so has part: feature:42080-42289:-1:exon

WP_150204723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42080-42289:-1:exon