Stenotrophomonas acidaminiphila strain T0-18 plasmid unnamed2, complete sequence.
type: Entry
definition: Stenotrophomonas acidaminiphila strain T0-18 plasmid unnamed2, complete sequence.
sequence version: NZ_CP043565.1
sequence date: 2023-02-07
sequence: sequence
division: CON
label: NZ_CP043565.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN12671292
keyword: RefSeq
source: Stenotrophomonas acidaminiphila
organism: Stenotrophomonas acidaminiphila
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.
reference: 1
references: 32474215
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP043565.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT Link v. v5.1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/19/2022 14:42:09\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,487\nCDSs (total) :: 3,413\nGenes (coding) :: 3,350\nCDSs (with protein) :: 3,350\nGenes (RNA) :: 74\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 61\nncRNAs :: 4\nPseudo Genes (total) :: 63\nCDSs (without protein) :: 63\nPseudo Genes (ambiguous residues) :: 0 of 63\nPseudo Genes (frameshifted) :: 27 of 63\nPseudo Genes (incomplete) :: 42 of 63\nPseudo Genes (internal stop) :: 5 of 63\nPseudo Genes (multiple problems) :: 11 of 63\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 22819
topology: circular
so has quality: SO_0000988
location: 1..22819
location: region:1-22819:1
RO_0002162: 128780

NZ_CP043565
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN12671292
type: BioSample
SIO_000068: biosample

1
title: Dynamics of class 1 integrons in aerobic biofilm reactors spiked with antibiotics
author: Huyan, J.
author: Tian, Z.
author: Zhang, Y.
author: Zhang, H.
author: Shi, Y.
author: Gillings, M.R.
author: Yang, M.
journal: Environ Int 140, 105816 (2020)
pubmed: 32474215

32474215
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Huyan, J.
journal: Submitted (02-SEP-2019) State Key Lab. of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Shuangqing Road, Beijing 100085, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22819:1
position: 22819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-22819:1:source
so part of: sequence
organism: Stenotrophomonas acidaminiphila
mol type: genomic DNA
strain: T0-18
isolation source: biofilm reactor
plasmid: unnamed2
country: China
collection date: 2018-07-01

128780
type: Taxonomy
SIO_000068: taxonomy

F0P95_RS17405
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS17405
pseudo: true
so part of: sequence
location: complement(<3..276)
location: region:3-276:-1
so has part: feature:3-276:-1:exon
subclass of: SO_0000010

78390577
type: Gene
SIO_000068: ncbigene

position:3:-1
position: 3
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:276:-1
position: 276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3-276:-1:exon

F0P95_RS17405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS17405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006279894.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: conjugal transfer protein TraI
SIO_010081: F0P95_RS17405
subclass of: SO_0000673
so part of: F0P95_RS17405
location: complement(<3..276)
location: region:3-276:-1
so has part: feature:3-276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3-276:-1:exon

F0P95_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00005
so part of: sequence
location: complement(273..632)
location: region:273-632:-1
so has part: feature:273-632:-1:exon
subclass of: SO_0000010

78387140
type: Gene
SIO_000068: ncbigene

position:273:-1
position: 273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632:-1
position: 632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273-632:-1:exon

F0P95_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020309020.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family transcriptional regulator
translation: MKDIKHPTRPRRALPPIKVWVTETERAEIAERAEQAGLSLSGYMLAAGLNHPVRSVVDLLAVADLGKVNGDLGRVAGLLKLWLAEKRGQGASSTDVADMMRDFRLLQTQLHEIMARLAK
SIO_010081: F0P95_RS00005
subclass of: SO_0000673
so part of: F0P95_RS00005
location: complement(273..632)
location: region:273-632:-1
so has part: feature:273-632:-1:exon

WP_182333654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273-632:-1:exon

F0P95_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00010
so part of: sequence
location: complement(632..865)
location: region:632-865:-1
so has part: feature:632-865:-1:exon
subclass of: SO_0000010

78387141
type: Gene
SIO_000068: ncbigene

position:865:-1
position: 865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632-865:-1:exon

F0P95_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKPIIVATSPLTDRIYAGTLLKDGVTWSATKDDVTGMACGAVAEHVMQRGGVVVVTANGKPAFEIIVRDVSAQGDA
SIO_010081: F0P95_RS00010
subclass of: SO_0000673
so part of: F0P95_RS00010
location: complement(632..865)
location: region:632-865:-1
so has part: feature:632-865:-1:exon

WP_182333655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:632-865:-1:exon

F0P95_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00015
so part of: sequence
location: complement(858..1646)
location: region:858-1646:-1
so has part: feature:858-1646:-1:exon
subclass of: SO_0000010

78387142
type: Gene
SIO_000068: ncbigene

position:858:-1
position: 858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1646:-1
position: 1646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858-1646:-1:exon

F0P95_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGTKKGCGNDQHAADGLRARLHEIAYRDSAASVTVRADDLRAILAALPPPHEAAAAPRFALRNGQVAQLFDFGGTPPVGTPLEDQDVLVIQHAEAGHSGPGLYAHYEDHPEEGALFLDGVLPARPKAPPLVPMVMPGRRVFSLNPHGDDVGYTLVIAPPGSGESILDSVRAVSKDAAAAILGNANIKIDASPNGRSEGQAAVAAIAFALDSATDGIAFLRSWNEGDFDAIRKWWPEAPEAVYVGADPLHVQASSQGGEVSDA
SIO_010081: F0P95_RS00015
subclass of: SO_0000673
so part of: F0P95_RS00015
location: complement(858..1646)
location: region:858-1646:-1
so has part: feature:858-1646:-1:exon

WP_182333656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:858-1646:-1:exon

F0P95_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00020
so part of: sequence
location: 1967..2350
location: region:1967-2350:1
so has part: feature:1967-2350:1:exon
subclass of: SO_0000010

78387143
type: Gene
SIO_000068: ncbigene

position:1967:1
position: 1967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2350:1
position: 2350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1967-2350:1:exon

F0P95_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00020
inference: COORDINATES: protein motif:HMM:NF036299.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraK family protein
translation: MTKAPKEALRGAGRVAFLARVADFRKLVDGGHPLLGIYESNKDDLGISYSQFARYVAKYIRSPSREQEAPSAPQSAPAPRPAPPAPVQPPAAPASSGSGPSRPAGKPTTKPGAFRHDADSNKRDDLI
SIO_010081: F0P95_RS00020
subclass of: SO_0000673
so part of: F0P95_RS00020
location: 1967..2350
location: region:1967-2350:1
so has part: feature:1967-2350:1:exon

WP_182333657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1967-2350:1:exon

F0P95_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00025
pseudo: true
so part of: sequence
location: 2373..3093
location: region:2373-3093:1
so has part: feature:2373-3093:1:exon
subclass of: SO_0000010

78387144
type: Gene
SIO_000068: ncbigene

position:2373:1
position: 2373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3093:1
position: 3093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2373-3093:1:exon

F0P95_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017161032.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: conjugal transfer protein TraL
SIO_010081: F0P95_RS00025
subclass of: SO_0000673
so part of: F0P95_RS00025
location: 2373..3093
location: region:2373-3093:1
so has part: feature:2373-3093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2373-3093:1:exon

F0P95_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00030
so part of: sequence
location: 3105..3560
location: region:3105-3560:1
so has part: feature:3105-3560:1:exon
subclass of: SO_0000010

78387145
type: Gene
SIO_000068: ncbigene

position:3105:1
position: 3105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3560:1
position: 3560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3105-3560:1:exon

F0P95_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003829133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraM
translation: MIPFDELRKEVAIRHNVLLGPDDPILVTVTLNELVLADFLEKARNDYTAANRELTVSLQQQVEQAKDTAGKIVTDSANYVREQVRQAMVSAFAEAGLQIRQQVADAQLAGRDAVTSGRDAQVAKNGAYLAAALAGVAALVAVAALVVVLVK
SIO_010081: F0P95_RS00030
subclass of: SO_0000673
so part of: F0P95_RS00030
location: 3105..3560
location: region:3105-3560:1
so has part: feature:3105-3560:1:exon

WP_182333658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3105-3560:1:exon

F0P95_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00035
so part of: sequence
location: complement(3744..3938)
location: region:3744-3938:-1
so has part: feature:3744-3938:-1:exon
subclass of: SO_0000010

78387146
type: Gene
SIO_000068: ncbigene

position:3744:-1
position: 3744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3938:-1
position: 3938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3744-3938:-1:exon

F0P95_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTIAMTTHRRNQLIALRNRLNDLGEPMHYFIDTARDTIPANGGAWNRKRVRIRNKINSRLRVA
SIO_010081: F0P95_RS00035
subclass of: SO_0000673
so part of: F0P95_RS00035
location: complement(3744..3938)
location: region:3744-3938:-1
so has part: feature:3744-3938:-1:exon

WP_182333659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3744-3938:-1:exon

F0P95_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00040
so part of: sequence
location: complement(3982..4257)
location: region:3982-4257:-1
so has part: feature:3982-4257:-1:exon
subclass of: SO_0000010

78387147
type: Gene
SIO_000068: ncbigene

position:3982:-1
position: 3982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4257:-1
position: 4257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3982-4257:-1:exon

F0P95_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAATDTRTLSTDALEVGMIVQYYGARLRLTKQTFTAEEAAKRADVEPTLRAFATEFVGNVNDDRPHSIPASWLKDWTVQGNHFAMWRVEA
SIO_010081: F0P95_RS00040
subclass of: SO_0000673
so part of: F0P95_RS00040
location: complement(3982..4257)
location: region:3982-4257:-1
so has part: feature:3982-4257:-1:exon

WP_182333660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3982-4257:-1:exon

F0P95_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00045
so part of: sequence
location: complement(4423..4650)
location: region:4423-4650:-1
so has part: feature:4423-4650:-1:exon
subclass of: SO_0000010

78387148
type: Gene
SIO_000068: ncbigene

position:4423:-1
position: 4423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4650:-1
position: 4650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4423-4650:-1:exon

F0P95_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005134413.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MRPLDALELEQAGKLLFGERWQSELARAIGVTDRLVRMWVAGKSPPRPAVRGKIVELLRARQEEITAVLRALEAD
SIO_010081: F0P95_RS00045
subclass of: SO_0000673
so part of: F0P95_RS00045
location: complement(4423..4650)
location: region:4423-4650:-1
so has part: feature:4423-4650:-1:exon

WP_182333661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4423-4650:-1:exon

F0P95_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00050
so part of: sequence
location: complement(4647..5075)
location: region:4647-5075:-1
so has part: feature:4647-5075:-1:exon
subclass of: SO_0000010

78387149
type: Gene
SIO_000068: ncbigene

position:4647:-1
position: 4647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5075:-1
position: 5075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4647-5075:-1:exon

F0P95_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDKSNSQMNKRPTYTAPDNLPAALRAQVEAAAKHKWVWLSPSGVAFWLNDATTAERKQEAVGGEVFPPEESPLDQARELLRQQGGGAVSIFDCCDTCDALLTADELAAPLLFGGRYCTFCADEVRAANPGAGAGSDAEVEG
SIO_010081: F0P95_RS00050
subclass of: SO_0000673
so part of: F0P95_RS00050
location: complement(4647..5075)
location: region:4647-5075:-1
so has part: feature:4647-5075:-1:exon

WP_182333662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4647-5075:-1:exon

F0P95_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00055
so part of: sequence
location: complement(5148..5489)
location: region:5148-5489:-1
so has part: feature:5148-5489:-1:exon
subclass of: SO_0000010

78387150
type: Gene
SIO_000068: ncbigene

position:5148:-1
position: 5148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5489:-1
position: 5489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5148-5489:-1:exon

F0P95_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00055
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAKNKPHMNLILRNCYPYPYPQDATEAEQEAISDEAGAGELVLADVIHFEWLHTVTVEFATFEAWAAAQQATGWKSWDTPLTLEAPTSGPEGYEHPAIIAAGKAWCGFGLAV
SIO_010081: F0P95_RS00055
subclass of: SO_0000673
so part of: F0P95_RS00055
location: complement(5148..5489)
location: region:5148-5489:-1
so has part: feature:5148-5489:-1:exon

WP_182333663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5148-5489:-1:exon

F0P95_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00060
so part of: sequence
location: complement(6187..7194)
location: region:6187-7194:-1
so has part: feature:6187-7194:-1:exon
subclass of: SO_0000010

78387151
type: Gene
SIO_000068: ncbigene

position:6187:-1
position: 6187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7194:-1
position: 7194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6187-7194:-1:exon

F0P95_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006401347.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication protein RepA
translation: MDDSKGKRAVTGSRTPATEAGKRLVSKAVGAETSQTRAEKALIAASARIMGSPPAGEDMAFTHSVLCQVGLPRSEVDGREFMRRSGAVWLNVQAGYLDEGSGPVAQPIPYGALPRLAMAWVSTFAVRNKAQEIPLGDSAADFLRLMGMDDQGNRYTALRKQMHALAACRMQFGFQGRTLNSQPVKQFDAWLATGNQRPLWPGVMVLSTDYYQSLQESAVPLDNRALHALKGSALALDIYTWLAHRLHRIEGRPIILHWKSLREQFAQEYTGQNADKDFKRAFLPALHKVKAVYPAAKVDPVKGGILMMPSPPPIPSKGSFDHHLQRLRGGGRPAK
SIO_010081: F0P95_RS00060
subclass of: SO_0000673
so part of: F0P95_RS00060
location: complement(6187..7194)
location: region:6187-7194:-1
so has part: feature:6187-7194:-1:exon

WP_182333664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6187-7194:-1:exon

F0P95_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00065
so part of: sequence
location: 7268..7498
location: region:7268-7498:1
so has part: feature:7268-7498:1:exon
subclass of: SO_0000010

78387152
type: Gene
SIO_000068: ncbigene

position:7268:1
position: 7268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7498:1
position: 7498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7268-7498:1:exon

F0P95_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004167234.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MTRDTTHPPASRATFAKNFRSARKKAGMTQQDVRDKTGFSLSFISELENGHCGVNLDNMELLAAAVGVPLWKLLTP
SIO_010081: F0P95_RS00065
subclass of: SO_0000673
so part of: F0P95_RS00065
location: 7268..7498
location: region:7268-7498:1
so has part: feature:7268-7498:1:exon

WP_182333665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7268-7498:1:exon

F0P95_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
gene: trbB
locus tag: F0P95_RS00070
so part of: sequence
location: 7656..8663
location: region:7656-8663:1
so has part: feature:7656-8663:1:exon
subclass of: SO_0000010

78387153
type: Gene
SIO_000068: ncbigene

position:7656:1
position: 7656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8663:1
position: 8663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7656-8663:1:exon

F0P95_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
gene: trbB
locus tag: F0P95_RS00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010103414.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MDGGGAELATQAPGVSVAQQELSRRVKTKLERELGPLVCDLLQDENVIEIMLNPDGKLWVERFGEPMKVVGCMPESQARSLMGTVAATLEVAITAQNPILECELPFDGSRFEALLPPIVQRPTFSIRKKAVRVFSLADYVSSGIMTATQREIIERAVLARKNILVVGGTGSGKTTLTNAIIHSMGEQCPEHRLITIEDTGELQCEVLNVVALRAVEYVTMTQLLRATMRLRPDRIVVGEVRGKEALALLKAWNTGHPGGVATVHANSAPAGLIRMEQLVAEATQAPMYSLISEAVNLIVSIGKVPHVGRRILEVVSVEGHDGNNYLTKPITNTEE
SIO_010081: F0P95_RS00070
subclass of: SO_0000673
so part of: F0P95_RS00070
location: 7656..8663
location: region:7656-8663:1
so has part: feature:7656-8663:1:exon

WP_182333666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7656-8663:1:exon

F0P95_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00075
so part of: sequence
location: 8668..9111
location: region:8668-9111:1
so has part: feature:8668-9111:1:exon
subclass of: SO_0000010

78387154
type: Gene
SIO_000068: ncbigene

position:8668:1
position: 8668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9111:1
position: 9111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8668-9111:1:exon

F0P95_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003829111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MYASSNTAPTNVSPFIQLVRSPGFWLALLFVGLLYFGAMDSAHAADAQASGGAGLPWEGPLDKLKKSISGPVAFVVALLGIVACGAQLIWGGEVSEFTRRLVYIVLVVCVLVFANTLLTGALFTGATIPDGMTLPALQSAAGVGGGR
SIO_010081: F0P95_RS00075
subclass of: SO_0000673
so part of: F0P95_RS00075
location: 8668..9111
location: region:8668-9111:1
so has part: feature:8668-9111:1:exon

WP_182333667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8668-9111:1:exon

F0P95_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00080
so part of: sequence
location: 9115..9429
location: region:9115-9429:1
so has part: feature:9115-9429:1:exon
subclass of: SO_0000010

78387155
type: Gene
SIO_000068: ncbigene

position:9115:1
position: 9115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9429:1
position: 9429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9115-9429:1:exon

F0P95_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004167243.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MEGTESRRMTPFHRALHRPQQIMGGERELTLFSMLVAGGLIVSAMNLVATVVGLVLWFFCLWALRHMAKVDPSLSKVYHRQLKYAHYYGPFSRPFRVAKSPRIH
SIO_010081: F0P95_RS00080
subclass of: SO_0000673
so part of: F0P95_RS00080
location: 9115..9429
location: region:9115-9429:1
so has part: feature:9115-9429:1:exon

WP_182333668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9115-9429:1:exon

F0P95_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00085
so part of: sequence
location: 9440..11944
location: region:9440-11944:1
so has part: feature:9440-11944:1:exon
subclass of: SO_0000010

78387156
type: Gene
SIO_000068: ncbigene

position:9440:1
position: 9440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11944:1
position: 11944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9440-11944:1:exon

F0P95_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011630636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter
translation: MLALAPFRRKAAGLPDLFNYAALVDEGIILGKDGALLAGFFFRGNDAASATDQDRNYLTAMVNNYLSRFGSGWAIWVDAARLQSPGYPAPESSHFPEPITALIDAERREMFERDDAHHETEYALVVQFLPPTRRNSKLGELVYDDDARDNAAPADRLLAEFKKRVADLEDGLHDLLHMRRMGTVRVGEGDAAYDSDELVNYLHFCITGNPIALRIPDCPMYLDAWLGFPEFWPGDTPKLGNKFISCVAIEGFPGASYPGILDMLDSLPLAYRWSTRFIFMEQHEAIAALNRYRLKWQQKIRGFMSQVMKSQKGVVNTDALQMMQQTEVAINDAQSGLVAYGYYTPVVVMMHEDRQFLEEQARYVKREIERQGFSARVETVNCVEAWLGTLPGQTHPNVRRPLVHTLNLADLLPLASVWPGLRENPSDLFPAGSPPLIQTVTTGGTPFRLNLHVSDVGHTLVFGPTGAGKSTLLATIVAQFRRYRSRVRGDGTTLPASVIAFDKGRSLYALCEATGGVHYDIGNDEGHSPALAPLIDVESDAEALWAEDWIATCFELQARKPPTPAQRSEIHRAVLLLREAPRNGRSLTDFCTTVQDSEVREALGHYTISGSMGHLLDGSDDTISISSFTVFEIDELMKMGEANAIPVLLYLFRRFERSLKGQPALLPLDEAWVMLGHPVFRERLREWLKELRKKNCAVLMATQSLSDATRSGLLDVLLEQCPTKIFLPNREAGEHGTKETPGPADLYKMFGLNEKEIKILKTAQYKRQYYYKSPLGRRVFELGLGPLALAFVAVSDKEELAAIRSLMNRHGRDWPLVWLNHKGVSYEKYLENAA
SIO_010081: F0P95_RS00085
subclass of: SO_0000673
so part of: F0P95_RS00085
location: 9440..11944
location: region:9440-11944:1
so has part: feature:9440-11944:1:exon

WP_182333669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9440-11944:1:exon

F0P95_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
gene: trbJ
locus tag: F0P95_RS00090
so part of: sequence
location: 11916..12677
location: region:11916-12677:1
so has part: feature:11916-12677:1:exon
subclass of: SO_0000010

78387157
type: Gene
SIO_000068: ncbigene

position:11916:1
position: 11916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12677:1
position: 12677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11916-12677:1:exon

F0P95_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
gene: trbJ
locus tag: F0P95_RS00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020309001.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MKNTSKTLRNGALSAALTFMVGSFFAVTPRPAEAIVCANCSTVWNQMLEYGQALKTAVNTAQQLQTQIRQYADMVKQGISLPASMLKSMQNDIAKLRNVYNDARMVAHSMKNLDKQFKDQFKGYKDYLKGIGDGSANMTDRYQKWADEGFDNARLSMEAAGINVSSFEDEDAMLRNLINQSQSAEGRLQAIQAGNEIAAQQVQQIQKLRELVATTITLQSNFIARETERQAVNDAAMEKFFEKPMQFNEGRRY
SIO_010081: F0P95_RS00090
subclass of: SO_0000673
so part of: F0P95_RS00090
location: 11916..12677
location: region:11916-12677:1
so has part: feature:11916-12677:1:exon

WP_182333644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11916-12677:1:exon

F0P95_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00095
so part of: sequence
location: 12681..12896
location: region:12681-12896:1
so has part: feature:12681-12896:1:exon
subclass of: SO_0000010

78387158
type: Gene
SIO_000068: ncbigene

position:12681:1
position: 12681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12896:1
position: 12896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12681-12896:1:exon

F0P95_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00095
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAITRIQIALLAGIAIGAAAGAGACMAVRAGHAVPTPECQTRDMEGTILGTGPNGETFKQRPVEITEGKRY
SIO_010081: F0P95_RS00095
subclass of: SO_0000673
so part of: F0P95_RS00095
location: 12681..12896
location: region:12681-12896:1
so has part: feature:12681-12896:1:exon

WP_182333645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12681-12896:1:exon

F0P95_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
gene: trbL
locus tag: F0P95_RS00100
so part of: sequence
location: 12918..14648
location: region:12918-14648:1
so has part: feature:12918-14648:1:exon
subclass of: SO_0000010

78387159
type: Gene
SIO_000068: ncbigene

position:12918:1
position: 12918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14648:1
position: 14648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12918-14648:1:exon

F0P95_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
gene: trbL
locus tag: F0P95_RS00100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020308999.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MIVVVVVLASLLLGSEAYAQVMGQDLSRPVDAFDNGLFNLIAEASKEWEGGLRGFANKLFWGLALIQFVWTFIPLVFKQADFGEIVGELVRFILVIGFFAGLLIYSSEWAAAIVNSFRQAGASAAGMDAQLSPGSMFGIGLQLAETIGNSTSLSHVLTPIVPMMIALSCIIVLLCFVFIAAFMGVTIIESMIVINASMIFMGFGASQWTREYAIAIMRYAVSVGAKLFILTLLVGLVQSAAKKWQIAYTDDTASMWTMVGLALVCAYFVKTLPELVQGVINGSSSGGGASLGSMAAAGAAGAAAAAATIATAGAAAPAAAAGGTGMAAGGAGAAGSGGLAGAINASFAGQAGATTAGTGAMQAGGIAGQAGGGVTSGVNATRAAAPRIGGGDAASAAGKAAGPKPSAPRSGEGGGIKQAIKAAGNGQRQDEGQSPATSPGVAPRSPGAEQKGITGHSIASAMTRGAGVLSAISVPGMEGAAGLSLGSGTPAPVQGDEQATTEGEGEGNIIRPSGDAAAEVPPAPAPVPGAVAAIEEAANEITQSRWSAEASSVGRRWAADASEFASGCEGCQLGRR
SIO_010081: F0P95_RS00100
subclass of: SO_0000673
so part of: F0P95_RS00100
location: 12918..14648
location: region:12918-14648:1
so has part: feature:12918-14648:1:exon

WP_232528651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12918-14648:1:exon

F0P95_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00105
so part of: sequence
location: 15168..15842
location: region:15168-15842:1
so has part: feature:15168-15842:1:exon
subclass of: SO_0000010

78387160
type: Gene
SIO_000068: ncbigene

position:15168:1
position: 15168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15842:1
position: 15842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15168-15842:1:exon

F0P95_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010103400.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB8/TrbF family protein
translation: MTDSKATPPENPYLAARREWNERYASFIAAANNWRLIALGTTAVAIIAVCGLVWVSGQAKVVPYVVETNEFGEVSSVKRADLAARPTNNHIKGALRQWIVGARTVYVDLRAEQDIVNATYAMTLPDSPAYKMLAEYHREKNPYQRAANETVELEVHAVEPLSEDTWRIEWTETVRSRAGKVSDDGPKKMQGTFTVLVSPPTTDAQIMANSLGIYVRQFAWTTRL
SIO_010081: F0P95_RS00105
subclass of: SO_0000673
so part of: F0P95_RS00105
location: 15168..15842
location: region:15168-15842:1
so has part: feature:15168-15842:1:exon

WP_182333647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15168-15842:1:exon

F0P95_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
gene: trbG
locus tag: F0P95_RS00110
so part of: sequence
location: 15866..16792
location: region:15866-16792:1
so has part: feature:15866-16792:1:exon
subclass of: SO_0000010

78387161
type: Gene
SIO_000068: ncbigene

position:15866:1
position: 15866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16792:1
position: 16792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15866-16792:1:exon

F0P95_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
gene: trbG
locus tag: F0P95_RS00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003829099.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MKISLWLAGVLASVLALPAAGQEVVPALNAAGGGNEVLPPVQMVSPDRVRLDAKETHGVQLADSWKRNPDKPRIGADGSVKYLFGATLPTLVCTPLQVCSIELQQGEVVNDVHAGDLARWKITPAVRGAGDTATTIIIVKPTDAGLVTNLLVTTDRRTYSIKLASTQSDWIPVLSFDYPEDVNRAWAQYRERIAQRQNATTLQTGENVGNLDFGFKMGGDNPSWRPQRIYSDGSKTYIQFPSADFAGSEAPALVEIGEGGGMFSRAPQQLVNYRVIGDRYVVDKVLERAALVSGVGKHQVKVTITRGR
SIO_010081: F0P95_RS00110
subclass of: SO_0000673
so part of: F0P95_RS00110
location: 15866..16792
location: region:15866-16792:1
so has part: feature:15866-16792:1:exon

WP_232528652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15866-16792:1:exon

F0P95_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00115
so part of: sequence
location: 16840..17247
location: region:16840-17247:1
so has part: feature:16840-17247:1:exon
subclass of: SO_0000010

78387162
type: Gene
SIO_000068: ncbigene

position:16840:1
position: 16840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17247:1
position: 17247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16840-17247:1:exon

F0P95_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00115
inference: COORDINATES: protein motif:HMM:NF018934.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MLSGCITTRPAGSFVAPGISPADATLLAKDAAVYLTTVLPPAKSTLVIQRPAGYGDDLVSPAFMAALRAAGYGVIEAGAEGSQVVGISVRYLASPLDDGMLLRLQYGSTEAARFYPRTATGAVGIGAPFVVRESQ
SIO_010081: F0P95_RS00115
subclass of: SO_0000673
so part of: F0P95_RS00115
location: 16840..17247
location: region:16840-17247:1
so has part: feature:16840-17247:1:exon

WP_182333649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16840-17247:1:exon

F0P95_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00120
so part of: sequence
location: 17247..18581
location: region:17247-18581:1
so has part: feature:17247-18581:1:exon
subclass of: SO_0000010

78387163
type: Gene
SIO_000068: ncbigene

position:18581:1
position: 18581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17247-18581:1:exon

F0P95_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005864504.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MNQKANAPKSPDFLAAPKKGAGVRRLNRVPLLVVGTLVLMAVGVVTYTFFQRQAQSNAKAAAVGPPPVESTAKPPVRPSAADYVEATPPSMPPGMPTDVVAAAGNELAVPAEAAAEHPAGPSEAYENRMRLIQRVEEQRMMRTEAALTAEPAVQAFKKDSGSGAAVSSAIAADPMSQMMAQYAAAANSAGAMGQMGAPSFAGDPGAMGGGGGAVDPNGQAAKRAFLAQQQSADDPYLGHTRQPAVSPQQEVKAGTIIPGVLMSGINSDLPGQIMGQVRENVYDTATGRNLLIPAGARLIGTYDNGVTFGQSRALVTWSRVIYPDGSSVNLNSMPGADMRGYAGFDDKVNNHYWRVFGHGLLVSMFSAGVQLSVPQKNSGDGYDAQQIMAAELGRQMGQLGIEMARKNMDIQPTIEIRPGYRFNVMVTKDIVLPTWHGHPMAPRR
SIO_010081: F0P95_RS00120
subclass of: SO_0000673
so part of: F0P95_RS00120
location: 17247..18581
location: region:17247-18581:1
so has part: feature:17247-18581:1:exon

WP_182333650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17247-18581:1:exon

F0P95_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00125
so part of: sequence
location: 18680..20416
location: region:18680-20416:1
so has part: feature:18680-20416:1:exon
subclass of: SO_0000010

78387164
type: Gene
SIO_000068: ncbigene

position:18680:1
position: 18680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20416:1
position: 20416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18680-20416:1:exon

F0P95_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00125
inference: COORDINATES: protein motif:HMM:NF023351.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inverse autotransporter beta domain-containing protein
translation: MFLTDIAKRFVHGIVALSLIFTPVTPAFSQTVQSPSGDEAIKDRIDAANAALPRSSDPSQFLYGQIAGAAQQAVVDGLRPFGNAKVQLDTQGGGSVDLLHPLGEDATNLWFFQGGVRRSNQLYRDYRTTLNAGLGYRRLIGDTAMVGINGFFDADVTGGNRRLGVGAEYWSDYLKVSANGYFGVNRVWNESPDVEFYSEKPASGFDVIAQGYLPQLPQLGGKVAFERYYGDSVGLFGFGAMQRDPYAYTVGLTYQPAPALSFDVSRRMGQGGESDTAFRVGLNFRFGVPLNRQFDFSHEAVARTRDVRNMRYDLVERNNNIVLKYKRQADNFSITLPDGVSGHPGERITFPISISDGSCDAIVWEGGAAGFVESCSGSEVVIRLPDTNVCAVHELVANGQSRQGRAIRARMSVSILCSASVLVVADPAVIAADGNSTSILTATVKDANGEPMQGIRVEWTSTAGTLADSNSTTDGEGRAKISLTSTTTPGTATVTAKAGAASGTTDVAFVTGAAANVAVSASPASITADGSSTQRPERDGDRCRWQPRGRCGRGLGDDRRLGGGRPARPMPAAWLPRR
SIO_010081: F0P95_RS00125
subclass of: SO_0000673
so part of: F0P95_RS00125
location: 18680..20416
location: region:18680-20416:1
so has part: feature:18680-20416:1:exon

WP_182333651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18680-20416:1:exon

F0P95_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS00140
so part of: sequence
location: 21440..22003
location: region:21440-22003:1
so has part: feature:21440-22003:1:exon
subclass of: SO_0000010

78387165
type: Gene
SIO_000068: ncbigene

position:21440:1
position: 21440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22003:1
position: 22003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21440-22003:1:exon

F0P95_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS00140
inference: COORDINATES: protein motif:HMM:NF020698.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: invasin domain 3-containing protein
translation: MTDAGGNRVAGAAVAWTTTAGTVVASSTTDASGVATSALTSSTTAGTATVTATSGGASGTAAVAFTVGAAANVAVSASPASITADGSSTSALSATVTDAGGNRVAGAAVAWTTTAGTVVASSTTDASGVATSTLTSSTTAGTATVTATSGGASGTAAVAFTVGAAANVARLGVAGVDHGPMAAAPAP
SIO_010081: F0P95_RS00140
subclass of: SO_0000673
so part of: F0P95_RS00140
location: 21440..22003
location: region:21440-22003:1
so has part: feature:21440-22003:1:exon

WP_182333652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21440-22003:1:exon

F0P95_RS17410
type: Gene
subclass of: SO_0000704
RO_0002162: 128780
locus tag: F0P95_RS17410
so part of: sequence
location: complement(22213..22506)
location: region:22213-22506:-1
so has part: feature:22213-22506:-1:exon
subclass of: SO_0000010

78390578
type: Gene
SIO_000068: ncbigene

position:22213:-1
position: 22213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22506:-1
position: 22506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22213-22506:-1:exon

F0P95_RS17410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 128780
locus tag: F0P95_RS17410
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKATAAVPLAPPLVAVTVAVPAVVLLVSAEVATPLASVVLDATTVPAVVVQATAAPATRLPPASVTVALRALVLLPSAVIDAGDAENGHVGPARDPP
SIO_010081: F0P95_RS17410
subclass of: SO_0000673
so part of: F0P95_RS17410
location: complement(22213..22506)
location: region:22213-22506:-1
so has part: feature:22213-22506:-1:exon

WP_232528653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22213-22506:-1:exon