Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence.
Peptoclostridium acidaminophilum DSM 3953
Bacteria; Bacillota; Clostridia; Eubacteriales; Peptostreptococcaceae; Peptoclostridium.
Complete Genome Sequence of Amino Acid-Utilizing Eubacterium acidaminophilum al-2 (DSM 3953)
Submitted (12-MAR-2014) Genomic and Applied Microbiology and Goettingen Genomics Laboratory, Georg-August-University Goettingen, Grisebachstr. 8, Goettingen, Lower Saxony 37077, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCP007453.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: MIRA v. 3.4\nGenome Coverage :: 112\nSequencing Technology :: Sanger dideoxy sequencing; 454; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/12/2023 01:48:51\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,985\nCDSs (total) :: 2,892\nGenes (coding) :: 2,842\nCDSs (with protein) :: 2,842\nGenes (RNA) :: 93\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 68\nncRNAs :: 4\nPseudo Genes (total) :: 50\nCDSs (without protein) :: 50\nPseudo Genes (ambiguous residues) :: 0 of 50\nPseudo Genes (frameshifted) :: 17 of 50\nPseudo Genes (incomplete) :: 28 of 50\nPseudo Genes (internal stop) :: 8 of 50\nPseudo Genes (multiple problems) :: 3 of 50\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Peptoclostridium acidaminophilum
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:TIGR00254.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF018290.2
COORDINATES: protein motif:HMM:NF014273.2
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_005582881.1
COORDINATES: protein motif:HMM:NF013015.2
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006038564.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
SprT family zinc-dependent metalloprotease
COORDINATES: protein motif:HMM:NF014479.2
muconolactone Delta-isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003432683.1
glycerol-3-phosphate responsive antiterminator
COORDINATES: similar to AA sequence:RefSeq:WP_002581296.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015942795.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013258481.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-C CRISPR-associated protein Cas7/Csd2
COORDINATES: protein motif:HMM:NF019844.2
GO:0070064 - proline-rich region binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020457737.1
COORDINATES: similar to AA sequence:RefSeq:WP_017690250.1
copper amine oxidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013117.2
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF015644.2
COORDINATES: similar to AA sequence:RefSeq:WP_006200546.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006520225.1
COORDINATES: similar to AA sequence:RefSeq:WP_006520223.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971672.1
COORDINATES: similar to AA sequence:RefSeq:WP_014520343.1
COORDINATES: protein motif:HMM:NF013989.2
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014063556.1
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: protein motif:HMM:NF024140.2
COORDINATES: similar to AA sequence:RefSeq:WP_005380296.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019907776.1
GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0048473 - D-methionine transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015312233.1
ATP-binding cassette domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_006285529.1
COORDINATES: similar to AA sequence:RefSeq:WP_010233555.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005213900.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
methylenetetrahydrofolate reductase [NAD(P)H]
COORDINATES: protein motif:HMM:NF014961.2
GO:0008705 - methionine synthase activity [Evidence IEA]
vitamin B12 dependent-methionine synthase activation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014968661.1
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: similar to AA sequence:RefSeq:WP_016174845.1
COORDINATES: similar to AA sequence:RefSeq:WP_011976542.1
COORDINATES: similar to AA sequence:RefSeq:WP_003356606.1
COORDINATES: similar to AA sequence:RefSeq:WP_015312334.1
COORDINATES: similar to AA sequence:RefSeq:WP_014967364.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013381582.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007062358.1
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017414359.1
COORDINATES: similar to AA sequence:RefSeq:WP_019377208.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014016.2
GO:0016829 - lyase activity [Evidence IEA]
CbiX/SirB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014420.2
COORDINATES: similar to AA sequence:RefSeq:WP_011987842.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0006824 - cobalt ion transport [Evidence IEA]
energy-coupling factor ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014968624.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0000041 - transition metal ion transport [Evidence IEA]
energy-coupling factor ABC transporter permease
COORDINATES: protein motif:HMM:TIGR03827.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
putative beta-lysine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015042095.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00379
cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_010964076.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964077.1
COORDINATES: similar to AA sequence:RefSeq:WP_010965783.1
COORDINATES: similar to AA sequence:RefSeq:WP_014355446.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0140132 - iron-sulfur cluster carrier activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
iron-sulfur cluster carrier protein MrpORP
COORDINATES: similar to AA sequence:RefSeq:WP_015051398.1
COORDINATES: similar to AA sequence:RefSeq:WP_005813891.1
COORDINATES: similar to AA sequence:RefSeq:WP_007780730.1
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012062703.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062630.1
COORDINATES: similar to AA sequence:RefSeq:WP_008539202.1
COORDINATES: protein motif:HMM:NF024258.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006311811.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017751678.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_013378973.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013389296.1
COORDINATES: similar to AA sequence:RefSeq:WP_006311810.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: protein motif:HMM:NF012382.2
pyridoxal phosphate-dependent class II aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014966790.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012509.2
COORDINATES: similar to AA sequence:RefSeq:WP_013388783.1
COORDINATES: similar to AA sequence:RefSeq:WP_013275142.1
cobalt-precorrin-5B (C(1))-methyltransferase CbiD
COORDINATES: protein motif:HMM:TIGR02467.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: protein motif:HMM:TIGR02469.1
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: protein motif:HMM:TIGR01467.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006805259.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: similar to AA sequence:RefSeq:WP_006807206.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014613.2
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: similar to AA sequence:RefSeq:WP_011722750.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018592294.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013658613.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006783544.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: similar to AA sequence:RefSeq:WP_017413324.1
GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0046416 - D-amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012343981.1
helix-turn-helix domain-containing protein
GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]; GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059940.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020335592.1
COORDINATES: protein motif:HMM:NF019149.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF012464.2
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020458102.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF027890.2
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_011393400.1
COORDINATES: similar to AA sequence:RefSeq:WP_011393399.1
COORDINATES: similar to AA sequence:RefSeq:WP_003514285.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF039786.1
COORDINATES: protein motif:HMM:NF033611.0
COORDINATES: protein motif:HMM:NF037736.2
COORDINATES: similar to AA sequence:RefSeq:WP_014315095.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014315094.1
GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
type I restriction-modification system subunit M
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013237015.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013297221.1
COORDINATES: similar to AA sequence:RefSeq:WP_013298715.1
COORDINATES: protein motif:HMM:NF023433.2
COORDINATES: similar to AA sequence:RefSeq:WP_018702240.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_012960967.1
COORDINATES: similar to AA sequence:RefSeq:WP_012283920.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF012688.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009269281.1
COORDINATES: similar to AA sequence:RefSeq:WP_008976211.1
COORDINATES: similar to AA sequence:RefSeq:WP_003350889.1
COORDINATES: similar to AA sequence:RefSeq:WP_016286527.1
GO:0003896 - DNA primase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004058627.1
COORDINATES: similar to AA sequence:RefSeq:WP_018704548.1
COORDINATES: similar to AA sequence:RefSeq:WP_018659556.1
COORDINATES: similar to AA sequence:RefSeq:WP_018659211.1
COORDINATES: similar to AA sequence:RefSeq:WP_019155135.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014315081.1
P27 family phage terminase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012268677.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015566406.1
COORDINATES: similar to AA sequence:RefSeq:WP_013843507.1
COORDINATES: similar to AA sequence:RefSeq:WP_009052894.1
COORDINATES: similar to AA sequence:RefSeq:WP_003731126.1
COORDINATES: similar to AA sequence:RefSeq:WP_010753829.1
COORDINATES: similar to AA sequence:RefSeq:WP_005211549.1
GO:0044423 - virion component [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003516023.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015926199.1
COORDINATES: similar to AA sequence:RefSeq:WP_019155114.1
COORDINATES: similar to AA sequence:RefSeq:WP_003495947.1
GO:0016032 - viral process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019976.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
nuclease-related domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013779440.1
COORDINATES: similar to AA sequence:RefSeq:WP_019278813.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073123.1
COORDINATES: similar to AA sequence:RefSeq:WP_019278815.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073120.1
COORDINATES: similar to AA sequence:RefSeq:WP_005211527.1
COORDINATES: similar to AA sequence:RefSeq:WP_005611048.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073118.1
COORDINATES: protein motif:HMM:NF017520.2
COORDINATES: protein motif:HMM:NF013955.2
COORDINATES: similar to AA sequence:RefSeq:WP_010073113.1
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: similar to AA sequence:RefSeq:WP_014128550.1
COORDINATES: similar to AA sequence:RefSeq:WP_010073110.1
COORDINATES: similar to AA sequence:RefSeq:WP_013291612.1
COORDINATES: similar to AA sequence:RefSeq:WP_013291613.1
COORDINATES: protein motif:HMM:NF012655.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF021568.2
Na-translocating system protein MpsC family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_076611202.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014064006.1
COORDINATES: similar to AA sequence:RefSeq:WP_002842590.1
COORDINATES: similar to AA sequence:RefSeq:WP_012899546.1
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:NF015413.2
COORDINATES: similar to AA sequence:RefSeq:WP_013842064.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_086558176.1
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_002189490.1
IS200/IS605 family element RNA-guided endonuclease TnpB
COORDINATES: protein motif:HMM:NF019542.2
COORDINATES: protein motif:HMM:NF014414.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012863538.1
COORDINATES: similar to AA sequence:RefSeq:WP_005541526.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_004848443.1
COORDINATES: protein motif:HMM:NF017536.2
pirin-like C-terminal cupin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003480536.1
COORDINATES: similar to AA sequence:RefSeq:WP_014185464.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009167575.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014466331.1
COORDINATES: similar to AA sequence:RefSeq:WP_006715018.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0018455 - alcohol dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013412.2
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020611367.1
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: similar to AA sequence:RefSeq:WP_013485806.1
COORDINATES: similar to AA sequence:RefSeq:WP_012451455.1
COORDINATES: similar to AA sequence:RefSeq:WP_006523953.1
COORDINATES: similar to AA sequence:RefSeq:WP_013909726.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013491.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015758575.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: protein motif:HMM:NF019450.2
COORDINATES: protein motif:HMM:NF024091.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015893743.1
COORDINATES: protein motif:HMM:NF024905.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018989995.1
COORDINATES: similar to AA sequence:RefSeq:WP_009205798.1
COORDINATES: similar to AA sequence:RefSeq:WP_019849981.1
COORDINATES: similar to AA sequence:RefSeq:WP_013778912.1
GO:0008838 - diaminopropionate ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019554880.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: protein motif:HMM:NF013426.2
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_013430365.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: similar to AA sequence:RefSeq:WP_014903029.1
COORDINATES: protein motif:HMM:NF020896.2
GO:0050485 - oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor [Evidence IEA]
glycine/sarcosine/betaine reductase component B subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011861888.1
D-proline reductase (dithiol) protein PrdB
COORDINATES: protein motif:HMM:NF016211.2
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF014342.2
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013258697.1
COORDINATES: similar to AA sequence:RefSeq:WP_015515075.1
COORDINATES: similar to AA sequence:RefSeq:WP_017436976.1
COORDINATES: similar to AA sequence:RefSeq:WP_014902833.1
GO:0035673 - oligopeptide transmembrane transporter activity [Evidence IEA]
GO:0006857 - oligopeptide transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017209999.1
COORDINATES: similar to AA sequence:RefSeq:WP_019227183.1
COORDINATES: similar to AA sequence:RefSeq:WP_016104535.1
COORDINATES: similar to AA sequence:RefSeq:WP_018205581.1
COORDINATES: similar to AA sequence:RefSeq:WP_007063114.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007060936.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012400.2
COORDINATES: similar to AA sequence:RefSeq:WP_003460345.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002583725.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059127.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007059126.1
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013726610.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360279.1
glutamate/gamma-aminobutyrate family transporter YjeM
COORDINATES: similar to AA sequence:RefSeq:WP_003483183.1
GO:0016805 - dipeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013777461.1
COORDINATES: similar to AA sequence:RefSeq:WP_014257080.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007131050.1
COORDINATES: protein motif:HMM:NF012907.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018306182.1
COORDINATES: similar to AA sequence:RefSeq:WP_006001912.1
COORDINATES: similar to AA sequence:RefSeq:WP_004618889.1
COORDINATES: similar to AA sequence:RefSeq:WP_000960812.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015956.2
GO:0046914 - transition metal ion binding [Evidence IEA]
GO:0055072 - iron ion homeostasis [Evidence IEA]; GO:0006811 - monoatomic ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012160552.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024081.2
FeoB-associated Cys-rich membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_010964821.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016002 - sulfite reductase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
anaerobic sulfite reductase subunit AsrA
COORDINATES: similar to AA sequence:RefSeq:WP_010964822.1
anaerobic sulfite reductase subunit AsrB
COORDINATES: similar to AA sequence:RefSeq:WP_007712287.1
GO:0016002 - sulfite reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011722821.1
COORDINATES: similar to AA sequence:RefSeq:WP_015327921.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: protein motif:HMM:NF015993.2
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: similar to AA sequence:RefSeq:WP_012065186.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: similar to AA sequence:RefSeq:WP_009005815.1
COORDINATES: protein motif:HMM:NF015970.2
COORDINATES: similar to AA sequence:RefSeq:WP_011099566.1
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:NF008298.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064084.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011948041.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005346225.1
2-hydroxycarboxylate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008425916.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012158755.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_006601789.1
COORDINATES: similar to AA sequence:RefSeq:WP_014968790.1
COORDINATES: similar to AA sequence:RefSeq:WP_012094141.1
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_005343103.1
COORDINATES: similar to AA sequence:RefSeq:WP_011860952.1
COORDINATES: similar to AA sequence:RefSeq:WP_004036546.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010098722.1
COORDINATES: similar to AA sequence:RefSeq:WP_006312062.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014022.2
YkoF family thiamine/hydroxymethylpyrimidine-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013388995.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015043667.1
COORDINATES: similar to AA sequence:RefSeq:WP_013150606.1
COORDINATES: similar to AA sequence:RefSeq:WP_009137594.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
[FeFe] hydrogenase H-cluster radical SAM maturase HydG
COORDINATES: similar to AA sequence:RefSeq:WP_013130044.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_008605092.1
COORDINATES: similar to AA sequence:RefSeq:WP_014256567.1
COORDINATES: similar to AA sequence:RefSeq:WP_005947765.1
COORDINATES: similar to AA sequence:RefSeq:WP_008426346.1
COORDINATES: similar to AA sequence:RefSeq:WP_007779084.1
COORDINATES: similar to AA sequence:RefSeq:WP_010243946.1
COORDINATES: protein motif:HMM:NF013629.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: similar to AA sequence:RefSeq:WP_011915833.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_084691462.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
Most members of this family contain a selenocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013387241.1
COORDINATES: protein motif:HMM:TIGR00564.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010234742.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]; GO:0004049 - anthranilate synthase activity [Evidence IEA]
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_041721410.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010234748.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_004463399.1
COORDINATES: similar to AA sequence:RefSeq:WP_012062336.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011025814.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_005487309.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_006963846.1
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002597175.1
GO:0043365 - [formate-C-acetyltransferase]-activating enzyme activity [Evidence IEA]
pyruvate formate-lyase-activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_003448207.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01750
ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT)
COORDINATES: protein motif:HMM:NF019947.2
COORDINATES: similar to AA sequence:RefSeq:WP_005488398.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012103341.1
COORDINATES: similar to AA sequence:RefSeq:WP_015907412.1
COORDINATES: similar to AA sequence:RefSeq:WP_015907413.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009461522.1
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012290202.1
COORDINATES: similar to AA sequence:RefSeq:WP_009002389.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF036726.2
acyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012176658.1
YedE family putative selenium transporter
COORDINATES: similar to AA sequence:RefSeq:WP_013910020.1
COORDINATES: similar to AA sequence:RefSeq:WP_014955866.1
COORDINATES: similar to AA sequence:RefSeq:WP_020878390.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012159590.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002844521.1
COORDINATES: similar to AA sequence:RefSeq:WP_006701678.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_009052770.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:NF024716.2
COORDINATES: similar to AA sequence:RefSeq:WP_003423639.1
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog.; Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_009893254.1
uroporphyrinogen decarboxylase family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF02683
NiCo riboswitches sense nickel or cobalt ions; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013658417.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_010293594.1
COORDINATES: similar to AA sequence:RefSeq:WP_006439075.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014903598.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013658923.1
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013361226.1
COORDINATES: similar to AA sequence:RefSeq:WP_018591221.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516518.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015617355.1
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: similar to AA sequence:RefSeq:WP_020531557.1
COORDINATES: similar to AA sequence:RefSeq:WP_011928276.1
COORDINATES: similar to AA sequence:RefSeq:WP_015756379.1
COORDINATES: similar to AA sequence:RefSeq:WP_003331763.1
IS200/IS605 family accessory protein TnpB-related protein
COORDINATES: similar to AA sequence:RefSeq:WP_015325680.1
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013941499.1
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_007059052.1
pyruvate kinase alpha/beta domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013658958.1
COORDINATES: similar to AA sequence:RefSeq:WP_011461145.1
COORDINATES: protein motif:HMM:NF016292.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019669986.1
COORDINATES: similar to AA sequence:RefSeq:WP_009333876.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_014354834.1
COORDINATES: similar to AA sequence:RefSeq:WP_010151197.1
COORDINATES: similar to AA sequence:RefSeq:WP_007712126.1
COORDINATES: similar to AA sequence:RefSeq:WP_009327843.1
COORDINATES: similar to AA sequence:RefSeq:WP_010294398.1
COORDINATES: similar to AA sequence:RefSeq:WP_007060138.1
COORDINATES: similar to AA sequence:RefSeq:WP_015758277.1
COORDINATES: similar to AA sequence:RefSeq:WP_015043654.1
COORDINATES: similar to AA sequence:RefSeq:WP_007062810.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076947.1
COORDINATES: similar to AA sequence:RefSeq:WP_013777972.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003374392.1
COORDINATES: similar to AA sequence:RefSeq:WP_008679732.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_003474668.1
COORDINATES: similar to AA sequence:RefSeq:WP_011010019.1
COORDINATES: similar to AA sequence:RefSeq:WP_012635475.1
COORDINATES: protein motif:HMM:NF023785.2
COORDINATES: similar to AA sequence:RefSeq:WP_013841626.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013429266.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF014567.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_006310025.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007221831.1
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_013386713.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007887308.1
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: similar to AA sequence:RefSeq:WP_010293204.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: similar to AA sequence:RefSeq:WP_012157986.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006565883.1
GO:0046873 - metal ion transmembrane transporter activity [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]
magnesium transporter CorA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013361627.1
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008678910.1
COORDINATES: similar to AA sequence:RefSeq:WP_016896389.1
GO:0015558 - secondary active p-aminobenzoyl-glutamate transmembrane transporter activity [Evidence IEA]
GO:1902604 - p-aminobenzoyl-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003496277.1
COORDINATES: similar to AA sequence:RefSeq:WP_005585592.1
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013239054.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: similar to AA sequence:RefSeq:WP_002286487.1
COORDINATES: similar to AA sequence:RefSeq:WP_016102677.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF024829.2
COORDINATES: similar to AA sequence:RefSeq:WP_002165711.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014793509.1
COORDINATES: protein motif:HMM:NF020364.2
COORDINATES: protein motif:HMM:TIGR00931.1
GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003416661.1
COORDINATES: similar to AA sequence:RefSeq:WP_011971183.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004454723.1
GO:0016746 - acyltransferase activity [Evidence IEA]
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_002567897.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003355797.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_005950949.1
COORDINATES: similar to AA sequence:RefSeq:WP_005949857.1
COORDINATES: similar to AA sequence:RefSeq:WP_002567900.1
2-ketoisovalerate ferredoxin oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_005950944.1
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF025774.2
COORDINATES: similar to AA sequence:RefSeq:WP_012158268.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0003959 - NADPH dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019959369.1
COORDINATES: similar to AA sequence:RefSeq:WP_006316653.1
sarcosine reductase complex component B subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_006807454.1
sarcosine reductase complex component B subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_005588331.1
COORDINATES: similar to AA sequence:RefSeq:WP_007957124.1
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF021485.2
COORDINATES: similar to AA sequence:RefSeq:WP_019879929.1
COORDINATES: similar to AA sequence:RefSeq:WP_016339998.1
COORDINATES: protein motif:HMM:TIGR04416.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_014185001.1
GO:0030612 - arsenate reductase (thioredoxin) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015009206.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022321.2
COORDINATES: similar to AA sequence:RefSeq:WP_010251849.1
COORDINATES: similar to AA sequence:RefSeq:WP_007861605.1
COORDINATES: similar to AA sequence:RefSeq:WP_004606523.1
COORDINATES: similar to AA sequence:RefSeq:WP_015526255.1
COORDINATES: similar to AA sequence:RefSeq:WP_015534271.1
COORDINATES: similar to AA sequence:RefSeq:WP_007861613.1
COORDINATES: protein motif:HMM:NF014093.2
GO:0033178 - proton-transporting two-sector ATPase complex, catalytic domain [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATP synthase subunit E family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002568369.1
COORDINATES: protein motif:HMM:NF013647.2
COORDINATES: similar to AA sequence:RefSeq:WP_012160655.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014184997.1
COORDINATES: similar to AA sequence:RefSeq:WP_012158965.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF041464.1
COORDINATES: protein motif:HMM:NF024880.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016440193.1
COORDINATES: similar to AA sequence:RefSeq:WP_015411315.1
COORDINATES: similar to AA sequence:RefSeq:WP_018708068.1
COORDINATES: similar to AA sequence:RefSeq:WP_006569713.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003359420.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009247834.1
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: similar to AA sequence:RefSeq:WP_008907449.1
COORDINATES: similar to AA sequence:RefSeq:WP_003356603.1
GO:0005283 - amino acid:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
alanine/glycine:cation symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012062875.1
indolepyruvate oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012062876.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_010963800.1
COORDINATES: similar to AA sequence:RefSeq:WP_017750932.1
COORDINATES: protein motif:HMM:TIGR00654.1
COORDINATES: similar to AA sequence:RefSeq:WP_017380343.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_007783167.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF013250.2
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007061820.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012198049.1
COORDINATES: protein motif:HMM:NF025601.2
COORDINATES: similar to AA sequence:RefSeq:WP_014968549.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009889910.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: similar to AA sequence:RefSeq:WP_012901504.1
COORDINATES: similar to AA sequence:RefSeq:WP_014520743.1
COORDINATES: similar to AA sequence:RefSeq:WP_010249761.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0008216 - spermidine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007429757.1
saccharopine dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008518781.1
COORDINATES: similar to AA sequence:RefSeq:WP_000063681.1
COORDINATES: similar to AA sequence:RefSeq:WP_017926081.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018247827.1
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014443.2
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011641267.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356012.1
COORDINATES: similar to AA sequence:RefSeq:WP_008699548.1
COORDINATES: similar to AA sequence:RefSeq:WP_007487986.1
COORDINATES: similar to AA sequence:RefSeq:WP_012344645.1
COORDINATES: similar to AA sequence:RefSeq:WP_012047711.1
COORDINATES: similar to AA sequence:RefSeq:WP_003485550.1
COORDINATES: protein motif:HMM:NF019352.2
GO:0005507 - copper ion binding [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006307572.1
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018594833.1
GO:0050096 - methylaspartate ammonia-lyase activity [Evidence IEA]
GO:0019670 - anaerobic glutamate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003019623.1
GO:0050097 - methylaspartate mutase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006001741.1
methylaspartate mutase accessory protein GlmL
COORDINATES: similar to AA sequence:RefSeq:WP_018591041.1
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: similar to AA sequence:RefSeq:WP_006001754.1
GO:0009346 - ATP-independent citrate lyase complex [Evidence IEA]
GO:0008815 - citrate (pro-3S)-lyase activity [Evidence IEA]; GO:0008814 - citrate CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013240646.1
GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006001759.1
GO:0008815 - citrate (pro-3S)-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00124.1
GO:0008771 - [citrate (pro-3S)-lyase] ligase activity [Evidence IEA]
GO:0006101 - citrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006001763.1
COORDINATES: protein motif:HMM:NF013991.2
GO:0050519 - holo-citrate lyase synthase activity [Evidence IEA]
GO:0051191 - prosthetic group biosynthetic process [Evidence IEA]
citrate lyase holo-[acyl-carrier protein] synthase
COORDINATES: protein motif:HMM:NF017747.2
COORDINATES: similar to AA sequence:RefSeq:WP_009528223.1
cyclodeaminase/cyclohydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006315116.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005859153.1
GO:0030412 - formimidoyltetrahydrofolate cyclodeaminase activity [Evidence IEA]; GO:0030409 - glutamate formimidoyltransferase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013777882.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017414679.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014183987.1
COORDINATES: similar to AA sequence:RefSeq:WP_017659141.1
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF016983.2
COORDINATES: similar to AA sequence:RefSeq:WP_020491008.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018650716.1
COORDINATES: similar to AA sequence:RefSeq:WP_013404709.1
COORDINATES: similar to AA sequence:RefSeq:WP_015052444.1
COORDINATES: protein motif:HMM:NF012544.2
COORDINATES: similar to AA sequence:RefSeq:WP_013362362.1
ClC family H(+)/Cl(-) exchange transporter
COORDINATES: similar to AA sequence:RefSeq:WP_019849702.1
COORDINATES: similar to AA sequence:RefSeq:WP_019153473.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388866.1
COORDINATES: protein motif:HMM:NF024598.2
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014117218.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489231.1
COORDINATES: similar to AA sequence:RefSeq:WP_004071862.1
COORDINATES: similar to AA sequence:RefSeq:WP_012058682.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018591573.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_008539459.1
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: protein motif:HMM:NF013980.2
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:NF012730.2
COORDINATES: protein motif:HMM:NF020571.2
COORDINATES: similar to AA sequence:RefSeq:WP_014256745.1
COORDINATES: similar to AA sequence:RefSeq:WP_013360784.1
COORDINATES: protein motif:HMM:NF017967.2
COORDINATES: similar to AA sequence:RefSeq:WP_005981891.1
COORDINATES: similar to AA sequence:RefSeq:WP_006314196.1
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: protein motif:HMM:NF033749.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008418668.1
iron-containing alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018306652.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019315.2
GO:0052621 - diguanylate cyclase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012047671.1
COORDINATES: similar to AA sequence:RefSeq:WP_003453797.1
COORDINATES: similar to AA sequence:RefSeq:WP_013720785.1
ribbon-helix-helix domain-containing protein
COORDINATES: protein motif:HMM:NF015925.2
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006317437.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014314051.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: similar to AA sequence:RefSeq:WP_013361052.1
COORDINATES: similar to AA sequence:RefSeq:WP_012157935.1
COORDINATES: similar to AA sequence:RefSeq:WP_003416787.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018592218.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059813.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006716477.1
COORDINATES: similar to AA sequence:RefSeq:WP_005444829.1
MetS family NSS transporter small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005949003.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF015549.2
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: similar to AA sequence:RefSeq:WP_017415026.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015132.2
COORDINATES: similar to AA sequence:RefSeq:WP_015754368.1
COORDINATES: protein motif:HMM:NF013539.2
MurR/RpiR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006308300.1
COORDINATES: similar to AA sequence:RefSeq:WP_006927823.1
COORDINATES: similar to AA sequence:RefSeq:WP_013624790.1
COORDINATES: similar to AA sequence:RefSeq:WP_013768847.1
COORDINATES: similar to AA sequence:RefSeq:WP_006718682.1
COORDINATES: similar to AA sequence:RefSeq:WP_019850054.1
COORDINATES: similar to AA sequence:RefSeq:WP_006718678.1
COORDINATES: similar to AA sequence:RefSeq:WP_004608104.1
COORDINATES: similar to AA sequence:RefSeq:WP_002588435.1
COORDINATES: similar to AA sequence:RefSeq:WP_006309666.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_020814705.1
COORDINATES: protein motif:HMM:NF016187.2
COORDINATES: similar to AA sequence:RefSeq:WP_006807183.1
oxaloacetate decarboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012159401.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013778975.1
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_012064281.1
COORDINATES: similar to AA sequence:RefSeq:WP_006317609.1
COORDINATES: similar to AA sequence:RefSeq:WP_004098437.1
GO:0047689 - aspartate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: similar to AA sequence:RefSeq:WP_007958233.1
COORDINATES: similar to AA sequence:RefSeq:WP_007958232.1
COORDINATES: protein motif:HMM:TIGR02494.1
GO:0043687 - post-translational protein modification [Evidence IEA]
glycyl-radical enzyme activating protein
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF013954.2
COORDINATES: similar to AA sequence:RefSeq:WP_015326749.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019637902.1
COORDINATES: similar to AA sequence:RefSeq:WP_015892751.1
COORDINATES: protein motif:HMM:NF022834.2
COORDINATES: similar to AA sequence:RefSeq:WP_013171137.1
COORDINATES: similar to AA sequence:RefSeq:WP_019375977.1
COORDINATES: protein motif:HMM:NF037653.2
COORDINATES: protein motif:HMM:NF025115.2
DUF3298 and DUF4163 domain-containing protein
COORDINATES: protein motif:HMM:NF015553.2
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: similar to AA sequence:RefSeq:WP_015393481.1
COORDINATES: similar to AA sequence:RefSeq:WP_007232160.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012064339.1
COORDINATES: similar to AA sequence:RefSeq:WP_019226719.1
COORDINATES: similar to AA sequence:RefSeq:WP_014356435.1
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: similar to AA sequence:RefSeq:WP_009262885.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011393498.1
selenium-dependent molybdenum cofactor biosynthesis protein YqeB
COORDINATES: protein motif:HMM:NF024214.2
GO:0070567 - cytidylyltransferase activity [Evidence IEA]
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor cytidylyltransferase
COORDINATES: protein motif:HMM:TIGR03172.2
selenium cofactor biosynthesis protein YqeC
COORDINATES: similar to AA sequence:RefSeq:WP_014969002.1
COORDINATES: similar to AA sequence:RefSeq:WP_018590510.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003424428.1
COORDINATES: protein motif:HMM:TIGR00571.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
Dam family site-specific DNA-(adenine-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_084481067.1
glycine/sarcosine/betaine reductase complex selenoprotein A
COORDINATES: similar to AA sequence:RefSeq:WP_011563453.1
COORDINATES: similar to AA sequence:RefSeq:WP_014182940.1
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF025122.2
COORDINATES: similar to AA sequence:RefSeq:WP_016423445.1
COORDINATES: similar to AA sequence:RefSeq:WP_018231035.1
COORDINATES: similar to AA sequence:RefSeq:WP_010234291.1
COORDINATES: similar to AA sequence:RefSeq:WP_010298077.1
COORDINATES: similar to AA sequence:RefSeq:WP_016297493.1
COORDINATES: similar to AA sequence:RefSeq:WP_003500145.1
CD1871A family CXXC motif-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013841717.1
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: similar to AA sequence:RefSeq:WP_020491179.1
COORDINATES: similar to AA sequence:RefSeq:WP_013840449.1
COORDINATES: protein motif:HMM:TIGR01662.1
COORDINATES: similar to AA sequence:RefSeq:WP_016135137.1
COORDINATES: protein motif:HMM:NF015894.2
COORDINATES: similar to AA sequence:RefSeq:WP_014183266.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010632905.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007059908.1
COORDINATES: similar to AA sequence:RefSeq:WP_014254221.1
GO:0004386 - helicase activity [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_017415772.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009744590.1