Spiroplasma taiwanense CT-1 plasmid unnamed, complete sequence.
type: Entry
definition: Spiroplasma taiwanense CT-1 plasmid unnamed, complete sequence.
sequence version: NC_021832.1
sequence date: 2022-12-18
sequence: sequence
division: CON
label: NC_021832.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02602966
keyword: RefSeq
source: Spiroplasma taiwanense CT-1
organism: Spiroplasma taiwanense CT-1
taxonomy: Bacteria; Tenericutes; Mollicutes; Entomoplasmatales; Spiroplasmataceae; Spiroplasma.
reference: 1
references: 23873917
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP005075.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: VELVET v. 1.2.07\nAssembly Name :: STAIW_v1\nGenome Coverage :: 8889.2x (paired-end reads, insert size\n approx. 192bp)\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/18/2022 12:48:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,156\nCDSs (total) :: 1,121\nGenes (coding) :: 1,101\nCDSs (with protein) :: 1,101\nGenes (RNA) :: 35\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 29\nncRNAs :: 3\nPseudo Genes (total) :: 20\nCDSs (without protein) :: 20\nPseudo Genes (ambiguous residues) :: 0 of 20\nPseudo Genes (frameshifted) :: 1 of 20\nPseudo Genes (incomplete) :: 14 of 20\nPseudo Genes (internal stop) :: 9 of 20\nPseudo Genes (multiple problems) :: 4 of 20\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 11138
topology: circular
so has quality: SO_0000988
location: 1..11138
location: region:1-11138:1
RO_0002162: 1276220

NC_021832
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02602966
type: BioSample
SIO_000068: biosample

1
title: Comparison of metabolic capacities and inference of gene content evolution in mosquito-associated Spiroplasma diminutum and S. taiwanense
author: Lo, W.S.
author: Ku, C.
author: Chen, L.L.
author: Chang, T.H.
author: Kuo, C.H.
journal: Genome Biol Evol
volume: 5
issue: 8
pages: 1512-1523
year: 2013
pubmed: 23873917

23873917
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Lo, W.-S.
author: Ku, C.
author: Chen, L.-L.
author: Chang, T.-H.
author: Kuo, C.-H.
journal: Submitted (29-MAR-2013) Institute of Plant and Microbial Biology, Academia Sinica, 128 Sec. 2, Academia Rd., Taipei 115, Taiwan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11138:1
position: 11138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11138:1:source
so part of: sequence
organism: Spiroplasma taiwanense CT-1
mol type: genomic DNA
strain: CT-1
culture collection: ATCC:43302
type material: type strain of Spiroplasma taiwanense
plasmid: unnamed

1276220
type: Taxonomy
SIO_000068: taxonomy

STAIW_RS05440
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05440
old locus tag: STAIW_v1c11060
so part of: sequence
location: 210..1124
location: region:210-1124:1
so has part: feature:210-1124:1:exon
subclass of: SO_0000010

position:210:1
position: 210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124:1
position: 1124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210-1124:1:exon

STAIW_RS05440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05440
old locus tag: STAIW_v1c11060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MINFSVNSTATSKQIRYINGLFSLLKRKNIEHQYIDSLSEHNGKKIDKNQASQILSELELIIQKHNEMDIFWEDGKNQINKSGIFDVINQRNYKKDISNIIVNWDKHIIDPNYGYDNKSMLVRIPLNLADLTSEQKLNIDTNKKYYLEFVCVKANWDNELETSKIGLIYRIKNNRINDISSGKYVTIDNSRFVIIGLNLKHKQWKRILDEQGNIIALDENVTSTGKFFEYHGKFWNSLSDVVEEYHKEAIILLNKAQNKLNNIVENIGVYKEFINVFEYSKQELEKIKDDFNRTTNILESPPDG
SIO_010081: STAIW_RS05440
subclass of: SO_0000673
so part of: STAIW_RS05440
location: 210..1124
location: region:210-1124:1
so has part: feature:210-1124:1:exon

WP_020835464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210-1124:1:exon

STAIW_RS05445
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05445
old locus tag: STAIW_v1c11070
so part of: sequence
location: 1380..1559
location: region:1380-1559:1
so has part: feature:1380-1559:1:exon
subclass of: SO_0000010

position:1380:1
position: 1380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559:1
position: 1559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380-1559:1:exon

STAIW_RS05445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05445
old locus tag: STAIW_v1c11070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MEIKVSETQIIAPNIKRVARDVYFKQNHVNLYEKVKEIKKYYKENNQDNNPKSIKIKRK
SIO_010081: STAIW_RS05445
subclass of: SO_0000673
so part of: STAIW_RS05445
location: 1380..1559
location: region:1380-1559:1
so has part: feature:1380-1559:1:exon

WP_020835465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1380-1559:1:exon

STAIW_RS05450
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05450
old locus tag: STAIW_v1c11080
so part of: sequence
location: complement(2110..2814)
location: region:2110-2814:-1
so has part: feature:2110-2814:-1:exon
subclass of: SO_0000010

position:2110:-1
position: 2110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2814:-1
position: 2814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2110-2814:-1:exon

STAIW_RS05450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05450
old locus tag: STAIW_v1c11080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MEQKYRKYTIIKYYKLHANNIFKTIDNNASINFKLNDEDYLKIRPAIIWDIVELNGNFKYLILPLTTKETKGLFNLKFRSKIKISNLNSKSFIMWDSIINIDENLIIGNYNKNGKTVKLSEANKKYILREKYFKDMTIFNNNLDFKKYTYLSSQLLINNLSKIAWNNSNQIKDENPKIIRECYICKEIINGGNKWNETNPKKSWTINFIDGNPFNYSNKNFCIVHFECLNINNK
SIO_010081: STAIW_RS05450
subclass of: SO_0000673
so part of: STAIW_RS05450
location: complement(2110..2814)
location: region:2110-2814:-1
so has part: feature:2110-2814:-1:exon

WP_020835466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2110-2814:-1:exon

STAIW_RS05455
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05455
old locus tag: STAIW_v1c11090
so part of: sequence
location: 3030..3476
location: region:3030-3476:1
so has part: feature:3030-3476:1:exon
subclass of: SO_0000010

position:3030:1
position: 3030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3476:1
position: 3476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3030-3476:1:exon

STAIW_RS05455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05455
old locus tag: STAIW_v1c11090
inference: COORDINATES: protein motif:HMM:NF038029.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: lipoprotein
translation: MKKILSLLGVAGLTATTAVTVVSCGTEKDPSEMTKEERIAAIKKLAEEAKNLINKANKMKDSGDLLGYFRIRTKNRYKLQEKIYKLDMGEKLVEGQYGMSTEEIIKTVKEGMSSLQKKISNGEIDNQKFIDGYENFKKEVHKYWGISE
SIO_010081: STAIW_RS05455
subclass of: SO_0000673
so part of: STAIW_RS05455
location: 3030..3476
location: region:3030-3476:1
so has part: feature:3030-3476:1:exon

WP_020835467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3030-3476:1:exon

STAIW_RS05460
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05460
old locus tag: STAIW_v1c11100
so part of: sequence
location: 3532..4446
location: region:3532-4446:1
so has part: feature:3532-4446:1:exon
subclass of: SO_0000010

position:3532:1
position: 3532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4446:1
position: 4446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3532-4446:1:exon

STAIW_RS05460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05460
old locus tag: STAIW_v1c11100
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKLLSLLGTVSIMASGASYVASVSTDKIQKYNVVYKTEDKIDWDNTQEEFKNVFDNIKENLINNNLLKISNNIDQDKILEYIEFSKNKAEQILSEVSSKNLGLDDTIEYVKVNNEQFVNSFNKGYDQFTNMDSKKIISTNFNVFGETNFNFLKFDNNFLSKLTPAQKNSELISKLKVAKLSLSSLSAAAAVAAAGFWAGSFWSFGATIPWAVGCSTVAGFLGAAAGGVSIALKKYNKDMSNWEKFGSVIGATISLGQVLATTSKILLINLTAGITPFCWCMPTLIALIATIGAIIAWIDGVKF
SIO_010081: STAIW_RS05460
subclass of: SO_0000673
so part of: STAIW_RS05460
location: 3532..4446
location: region:3532-4446:1
so has part: feature:3532-4446:1:exon

WP_020835468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3532-4446:1:exon

STAIW_RS05465
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05465
old locus tag: STAIW_v1c11110
so part of: sequence
location: 4448..5152
location: region:4448-5152:1
so has part: feature:4448-5152:1:exon
subclass of: SO_0000010

position:4448:1
position: 4448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5152:1
position: 5152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4448-5152:1:exon

STAIW_RS05465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05465
old locus tag: STAIW_v1c11110
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MLIAISMCIIPILMSGFFAYLISWYILKRKIDFVKNIFDQEKFFKFPIILDREKNKIFIPYFIFIILNTLIFIIFCFIFTPSDDGYLQYMLLIGIIYIISIISIIWFIVLSIKKNKNIKFTNSEEEKDFIINQLEIGKTYEDKLEQINLQNSSNTYNMYLNLAQKRYIKRIDKSLTYEKIYELFLKYIRANCWILTQMLSKENIKSNIEINKKLQDIPEIIFKNFWNSVSRVFE
SIO_010081: STAIW_RS05465
subclass of: SO_0000673
so part of: STAIW_RS05465
location: 4448..5152
location: region:4448-5152:1
so has part: feature:4448-5152:1:exon

WP_020835469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4448-5152:1:exon

STAIW_RS05470
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05470
old locus tag: STAIW_v1c11120
so part of: sequence
location: 5323..5616
location: region:5323-5616:1
so has part: feature:5323-5616:1:exon
subclass of: SO_0000010

position:5323:1
position: 5323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5616:1
position: 5616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5323-5616:1:exon

STAIW_RS05470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05470
old locus tag: STAIW_v1c11120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MIENNFTILLDPDNEFLNISKNLEANMIDLAALNQILNPFDVVAPVVQDEVYLSFEEKKNWFLEEHLNKLKEFHELLFPDWIQDKQIFLTKLIKKLL
SIO_010081: STAIW_RS05470
subclass of: SO_0000673
so part of: STAIW_RS05470
location: 5323..5616
location: region:5323-5616:1
so has part: feature:5323-5616:1:exon

WP_020835470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5323-5616:1:exon

STAIW_RS05475
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05475
old locus tag: STAIW_v1c11130
so part of: sequence
location: 5649..5843
location: region:5649-5843:1
so has part: feature:5649-5843:1:exon
subclass of: SO_0000010

position:5649:1
position: 5649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5843:1
position: 5843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5649-5843:1:exon

STAIW_RS05475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05475
old locus tag: STAIW_v1c11130
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MIGYIYIVDNHQVTPASFKLEFNLLHKTLKDFMNSDVERKYLQKKYNEQISFINEFQIFWVENN
SIO_010081: STAIW_RS05475
subclass of: SO_0000673
so part of: STAIW_RS05475
location: 5649..5843
location: region:5649-5843:1
so has part: feature:5649-5843:1:exon

WP_020835471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5649-5843:1:exon

STAIW_RS05480
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05480
old locus tag: STAIW_v1c11140
so part of: sequence
location: 5970..6551
location: region:5970-6551:1
so has part: feature:5970-6551:1:exon
subclass of: SO_0000010

position:5970:1
position: 5970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6551:1
position: 6551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5970-6551:1:exon

STAIW_RS05480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05480
old locus tag: STAIW_v1c11140
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKLLSLVGAISLGICSSATVVSCGSLNSNSNSDSNSDSNSDSNSDSNSDSNSDSNSDSDSDSDSDSTEKKPSEMTKEERIEAINKLLEEIEEIYKKSKELVESGNAYEAIKLQFIDLYVKLIAIYELDMEENLIWSSDPGASPNSSGQSRDSVIDEIKWLFEQAEKDGLSGLTAEEIVKLKKEVYEYWGISE
SIO_010081: STAIW_RS05480
subclass of: SO_0000673
so part of: STAIW_RS05480
location: 5970..6551
location: region:5970-6551:1
so has part: feature:5970-6551:1:exon

WP_020835472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5970-6551:1:exon

STAIW_RS05485
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05485
old locus tag: STAIW_v1c11150
so part of: sequence
location: 6612..7097
location: region:6612-7097:1
so has part: feature:6612-7097:1:exon
subclass of: SO_0000010

position:6612:1
position: 6612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7097:1
position: 7097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6612-7097:1:exon

STAIW_RS05485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05485
old locus tag: STAIW_v1c11150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKLLSLVGAISLGICSSATVVSCGSLNSNSNSDSTEKKPSEMTKEERIEAINKLLEEINEIYKKSEELGKSGNVYEAIKLQFIDLSLKLIAIYELDMGENLVYKPEPGASSNSQGQSRESVIDGIKKAFKTLEKDGFTGLTAEQILQLKKEVYEYWGISE
SIO_010081: STAIW_RS05485
subclass of: SO_0000673
so part of: STAIW_RS05485
location: 6612..7097
location: region:6612-7097:1
so has part: feature:6612-7097:1:exon

WP_020835473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6612-7097:1:exon

STAIW_RS05490
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05490
old locus tag: STAIW_v1c11160
so part of: sequence
location: 7157..7588
location: region:7157-7588:1
so has part: feature:7157-7588:1:exon
subclass of: SO_0000010

position:7157:1
position: 7157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7588:1
position: 7588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7157-7588:1:exon

STAIW_RS05490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05490
old locus tag: STAIW_v1c11160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKILGLMGTLGTIVSSGSFVVACSDKTTEKVKTVEDLIAEYNNKSDRLEIILLEADNNNWTNYQEALFLYSDLYAISYEIILLNPDWKRGVKNTEYVDSKEELIEELETEKKYWMENSILPNGQNVSQEFLDYIDKLINKYK
SIO_010081: STAIW_RS05490
subclass of: SO_0000673
so part of: STAIW_RS05490
location: 7157..7588
location: region:7157-7588:1
so has part: feature:7157-7588:1:exon

WP_020835474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7157-7588:1:exon

STAIW_RS05495
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05495
old locus tag: STAIW_v1c11170
so part of: sequence
location: 7752..8183
location: region:7752-8183:1
so has part: feature:7752-8183:1:exon
subclass of: SO_0000010

position:7752:1
position: 7752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8183:1
position: 8183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7752-8183:1:exon

STAIW_RS05495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05495
old locus tag: STAIW_v1c11170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MKKILGLMGTLGTIVSSGSFVVACSDNTTEKVKTVEDLIAEYNNKNDRLDIILLENDKDDWTNYKETLFLYADLYAISYEIILLNPDWKPEEGKRFYVASKEELIELLNALKKQVTENPILPNGQNVSQEFTNYIDSLINKYE
SIO_010081: STAIW_RS05495
subclass of: SO_0000673
so part of: STAIW_RS05495
location: 7752..8183
location: region:7752-8183:1
so has part: feature:7752-8183:1:exon

WP_020835475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7752-8183:1:exon

STAIW_RS05500
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05500
old locus tag: STAIW_v1c11180
so part of: sequence
location: complement(8564..8863)
location: region:8564-8863:-1
so has part: feature:8564-8863:-1:exon
subclass of: SO_0000010

position:8564:-1
position: 8564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8863:-1
position: 8863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8564-8863:-1:exon

STAIW_RS05500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05500
old locus tag: STAIW_v1c11180
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MANKLFEKLSKDVNTKNTAKSINDLVQEKQKNEEYIDVYNIKPLKKISNSFEFKGKQTTIYLDYETLQKIQKLKKMGLNPNLSENTRKFIGELYEKWNK
SIO_010081: STAIW_RS05500
subclass of: SO_0000673
so part of: STAIW_RS05500
location: complement(8564..8863)
location: region:8564-8863:-1
so has part: feature:8564-8863:-1:exon

WP_020835476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8564-8863:-1:exon

STAIW_RS05505
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05505
old locus tag: STAIW_v1c11190
so part of: sequence
location: complement(8865..9647)
location: region:8865-9647:-1
so has part: feature:8865-9647:-1:exon
subclass of: SO_0000010

position:8865:-1
position: 8865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9647:-1
position: 9647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8865-9647:-1:exon

STAIW_RS05505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05505
old locus tag: STAIW_v1c11190
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 4
product: AAA family ATPase
translation: MKKITFTNSKGGVGKTTITLNVANALAKLGKKVLIFDFDSQANISLALQKNWKSNKEIIKWFQEDSTKEELLLSIEDTDIENIFLVGANRELSLVTMSDLNSLAMGELILKQNFKKIEEELKQKIDYILMDTSPTMSKILLNVLLAADEIIIPIEPHKFSIEGLETITKPYNKMIKTLNDIGSNIKNNINYYVVNKIQKNVTHKDVMQWINTLAIANKILNSKIPFSTIRQKETMINKFSLTDKSPFLILVEELFEKGIL
SIO_010081: STAIW_RS05505
subclass of: SO_0000673
so part of: STAIW_RS05505
location: complement(8865..9647)
location: region:8865-9647:-1
so has part: feature:8865-9647:-1:exon

WP_020835477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8865-9647:-1:exon

STAIW_RS06285
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS06285
so part of: sequence
location: 10189..10356
location: region:10189-10356:1
so has part: feature:10189-10356:1:exon
subclass of: SO_0000010

position:10189:1
position: 10189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10356:1
position: 10356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10189-10356:1:exon

STAIW_RS06285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS06285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MVKWIPTTPLTRDEQDWVLTKQAEKAIFLASTIARYKVVYVMPKMVEKIRLNNYS
SIO_010081: STAIW_RS06285
subclass of: SO_0000673
so part of: STAIW_RS06285
location: 10189..10356
location: region:10189-10356:1
so has part: feature:10189-10356:1:exon

WP_169522280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10189-10356:1:exon

STAIW_RS05510
type: Gene
subclass of: SO_0000704
RO_0002162: 1276220
locus tag: STAIW_RS05510
old locus tag: STAIW_v1c11210
so part of: sequence
location: 10465..10869
location: region:10465-10869:1
so has part: feature:10465-10869:1:exon
subclass of: SO_0000010

position:10465:1
position: 10465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10869:1
position: 10869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10465-10869:1:exon

STAIW_RS05510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1276220
locus tag: STAIW_RS05510
old locus tag: STAIW_v1c11210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 4
product: hypothetical protein
translation: MDKTTLKKSRNDYYQDLLNFSLDKFFEDYHKPIINDAIAKIVSKVFKDNIKYMVNELKGIFISNKYDVEYLKALSNILFKLNVEAKYKSDDRDFFDDNVSVHSEFLEIPITMEKYANNLEKKKQVHLANFKKNK
SIO_010081: STAIW_RS05510
subclass of: SO_0000673
so part of: STAIW_RS05510
location: 10465..10869
location: region:10465-10869:1
so has part: feature:10465-10869:1:exon

WP_020835479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10465-10869:1:exon