Raoultella electrica strain DSM 102253 plasmid unnamed5, complete sequence.
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Raoultella.
Complete genome sequence of Raoultella electrica 1GB (DSM 102253T), isolated from anodic biofilms of a glucose-fed microbial fuel cell
Submitted (24-JUN-2019) Bioinformatics, Leibniz Institute DSMZ, Inhoffenstr. 7B, Braunschweig 38124, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCP041252.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP SMRTPortal v. 2.3.0\nAssembly Name :: Raoultella_electrica_DSM\n 102253_HGAP3_10Mb_1SC\nGenome Coverage :: 130x\nSequencing Technology :: PacBio RSII; Illumina NextSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/23/2022 03:04:32\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,586\nCDSs (total) :: 5,470\nGenes (coding) :: 5,292\nCDSs (with protein) :: 5,292\nGenes (RNA) :: 116\nrRNAs :: 9, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 9, 8, 8 (5S, 16S, 23S)\ntRNAs :: 86\nncRNAs :: 5\nPseudo Genes (total) :: 178\nCDSs (without protein) :: 178\nPseudo Genes (ambiguous residues) :: 0 of 178\nPseudo Genes (frameshifted) :: 62 of 178\nPseudo Genes (incomplete) :: 138 of 178\nPseudo Genes (internal stop) :: 25 of 178\nPseudo Genes (multiple problems) :: 42 of 178\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
anodic biofilm of glucose-fed microbial fuel cell originally inoculated with sewage sludge
COORDINATES: similar to AA sequence:RefSeq:WP_000166328.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
Rop family plasmid primer RNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:YP_005229777.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004178052.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010904246.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004152296.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008323621.1
GO:0019867 - outer membrane [Evidence IEA]