Salipiger abyssi strain JLT2014 plasmid pPABY6, complete sequence.
type: Entry
definition: Salipiger abyssi strain JLT2014 plasmid pPABY6, complete sequence.
sequence version: NZ_CP015094.1
sequence date: 2023-02-06
sequence: sequence
division: CON
label: NZ_CP015094.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN04562614
keyword: RefSeq
source: Salipiger abyssi
organism: Salipiger abyssi
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Salipiger.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP015094.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/06/2023 04:28:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,147\nCDSs (total) :: 5,091\nGenes (coding) :: 5,023\nCDSs (with protein) :: 5,023\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 4\nPseudo Genes (total) :: 68\nCDSs (without protein) :: 68\nPseudo Genes (ambiguous residues) :: 0 of 68\nPseudo Genes (frameshifted) :: 32 of 68\nPseudo Genes (incomplete) :: 33 of 68\nPseudo Genes (internal stop) :: 6 of 68\nPseudo Genes (multiple problems) :: 2 of 68\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 64192
topology: circular
so has quality: SO_0000988
location: 1..64192
location: region:1-64192:1
RO_0002162: 1250539

NZ_CP015094
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN04562614
type: BioSample
SIO_000068: biosample

1
title: Deep-sea bacteria in the southern Pacific
author: Tang, K.
journal: Unpublished

2
title: Direct Submission
author: Tang, K.
journal: Submitted (06-APR-2016) State Key Laboratory for Marine Environmental Science, Institute of Marine Microbes and Ecospheres, Xiamen University, Zhoulongquan Building A2-319, Xianan, Xiamen 361005, China

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64192:1
position: 64192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-64192:1:source
so part of: sequence
organism: Salipiger abyssi
mol type: genomic DNA
strain: JLT2014
isolation source: marine seawater
type material: type strain of Pelagibaca abyssi
plasmid: pPABY6
country: Pacific Ocean
collection date: 2012-12-10

1250539
type: Taxonomy
SIO_000068: taxonomy

Ga0080574_RS24235
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24235
old locus tag: Ga0080574_TMP4889
so part of: sequence
location: complement(327..1121)
location: region:327-1121:-1
so has part: feature:327-1121:-1:exon
subclass of: SO_0000010

position:327:-1
position: 327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121:-1
position: 1121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327-1121:-1:exon

Ga0080574_RS24235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24235
old locus tag: Ga0080574_TMP4889
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002724798.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter permease
translation: MSDAAIAKPRFLFFRSVMALMLREMSTSYGRSPGGYIWAFAEPVGGILVLTLVFGMIARSPALGSNFPLFFASGMVPFLLYQSTTANVGGAIRYSRPLLAYPGVTFVDAILARLILNGLTQILVGIILFGMIILLYGLKLEIHFLDCVRAVGMLLALGLGVGLVNCYLMSMFPIWQFIWSVLNRPLFIISGVFFLIDRLPETIRSGLLWNPMAHPIMMLRRGIYDTYDAVYVSELYVYTVALLLGALGMLLLYRFHRVILDEGI
SIO_010081: Ga0080574_RS24235
subclass of: SO_0000673
so part of: Ga0080574_RS24235
location: complement(327..1121)
location: region:327-1121:-1
so has part: feature:327-1121:-1:exon

WP_237219429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327-1121:-1:exon

Ga0080574_RS24240
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24240
old locus tag: Ga0080574_TMP4890
so part of: sequence
location: 1266..2486
location: region:1266-2486:1
so has part: feature:1266-2486:1:exon
subclass of: SO_0000010

position:1266:1
position: 1266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2486:1
position: 2486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1266-2486:1:exon

Ga0080574_RS24240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24240
old locus tag: Ga0080574_TMP4890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011840036.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sugar transporter
translation: MSTAAPAAQPANKPATLAGQIPKNARKARPQKRHYGVLASFVLVVVLPLTLAIFYLFAIAEDQYATSFGFAVRSEETTLANSLLGGLSSLSGGSSSSDSDILYEFIQSRTLVEKVDERLDLTSIFSRPEYDPYFSYDPEGSFEDLVAYWQRMVHVSYASSGTGLLEVTIKAFTPGDALAIAEAIVSESTVMINELSTIARADATRYAREDLDQAVTQLKTAREALTRFRSVNRIIDPSADLQGQLGLLNSLEAKLAEVIIELNVQLETARENDPRVVQLRNRIPVINKLIEEERRKFGLGGTMGGDTSAPAIEGARDYSTIVGEFERLTVDLEYAEERYLATQAALDAAQAEAQRQSRYLATYMQPSLPASSQYPERGELLLIATTILLLSWAVGVLIYYSLRDRR
SIO_010081: Ga0080574_RS24240
subclass of: SO_0000673
so part of: Ga0080574_RS24240
location: 1266..2486
location: region:1266-2486:1
so has part: feature:1266-2486:1:exon

WP_237219430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1266-2486:1:exon

Ga0080574_RS24245
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24245
old locus tag: Ga0080574_TMP4891
so part of: sequence
location: 2501..3178
location: region:2501-3178:1
so has part: feature:2501-3178:1:exon
subclass of: SO_0000010

position:2501:1
position: 2501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3178:1
position: 3178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501-3178:1:exon

Ga0080574_RS24245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24245
old locus tag: Ga0080574_TMP4891
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009813499.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MIELRNLTKIYRLNGVAKPIARDLTFTFPRGECVGLMGPNGAGKSTMLKLIAGTIQPDSGEIIRHGSVSWPVGFAGSFHGDMTGAQNVKFVARLYGIDTDEMTEFARDFSQLGAHFYLPVRTYSSGMRSRLAFAMSMAVKFDTYLIDEVTAVGDGAFKAKSEAILLERLETSGAIFVSHSLPQMERLCQSGIVLQNGRFFYYARVQKAIEHYQHTMKGILPPWMR
SIO_010081: Ga0080574_RS24245
subclass of: SO_0000673
so part of: Ga0080574_RS24245
location: 2501..3178
location: region:2501-3178:1
so has part: feature:2501-3178:1:exon

WP_076706126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2501-3178:1:exon

Ga0080574_RS24250
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24250
old locus tag: Ga0080574_TMP4892
so part of: sequence
location: complement(3213..4199)
location: region:3213-4199:-1
so has part: feature:3213-4199:-1:exon
subclass of: SO_0000010

position:3213:-1
position: 3213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4199:-1
position: 4199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3213-4199:-1:exon

Ga0080574_RS24250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24250
old locus tag: Ga0080574_TMP4892
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009565048.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB N-terminal domain-containing protein
translation: MAKRKRLSPPRLDMFSAAPAEQAQVTGARVPIAQMAGDAAVAAAFGEVQAELQAAQREGRMVLSLPLGAIVEDHLIRDRLACDAEAQQALQDSLRQRGQQTPVEVTDLGDGRYGLISGWRRLRALRTLLDETGETERFGSVLALVRLPRDRPAAYVAMVEENEIRADLSFYERARIVAQAVHAGVYDSEKAALQGLFASASFSKRSKIKSFLPLVAALDGALRYPGQIPERLGLALSRALTEDPGVASELTAQLAAAPERDAAGERALLEAALRPAPAKTAAPEAVPAVALSLPGGVRLKGGAGRIALDGEGVTEALIADLAEWLRQR
SIO_010081: Ga0080574_RS24250
subclass of: SO_0000673
so part of: Ga0080574_RS24250
location: complement(3213..4199)
location: region:3213-4199:-1
so has part: feature:3213-4199:-1:exon

WP_076706127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3213-4199:-1:exon

Ga0080574_RS24255
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24255
old locus tag: Ga0080574_TMP4893
so part of: sequence
location: complement(4247..5644)
location: region:4247-5644:-1
so has part: feature:4247-5644:-1:exon
subclass of: SO_0000010

position:4247:-1
position: 4247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5644:-1
position: 5644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4247-5644:-1:exon

Ga0080574_RS24255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24255
old locus tag: Ga0080574_TMP4893
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012187246.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MAQDPIDLPPYFNIRPDTALDELTAPVGAGDFAQIAGRCHQGCADLASRGLDEGGEKTLRRFSTWEITRYLIPVAQAHFRRVLRQNPHLPQGMSETEGGAKWFTLDEVLTLRAHFAAEGSKAKEYRPYRPETLPAKMVAVANFKGGVGKTSTCAHLAMSAALDGYKVLVIDLDSQGSMTSIMGGRIEDEWQTVFPLLARHYAATLQAENRVRIERGEDPKPLDETLSEARDISANDLIRGTHWPNIDLIGAQLNLYWAEFQIPVWRMQSRRWKLWDALADTLSADGVLERYDLIFIDTPPALGYLTINGLAAADILLVPVGASYLEFDSTGRFFDMLHSTFASIEEGENMAARALGHPELSFEWDAVRAVITRFDAAQQAELAGLMQAYLGETLSPHRQDFTALIGQAGEQAVGIYEADYRDFNRETYVRGRATFDQTYAAFKRLLVGIWRREERAAEDRVAQAG
SIO_010081: Ga0080574_RS24255
subclass of: SO_0000673
so part of: Ga0080574_RS24255
location: complement(4247..5644)
location: region:4247-5644:-1
so has part: feature:4247-5644:-1:exon

WP_076706128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4247-5644:-1:exon

Ga0080574_RS24260
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24260
old locus tag: Ga0080574_TMP4895
so part of: sequence
location: 6120..7118
location: region:6120-7118:1
so has part: feature:6120-7118:1:exon
subclass of: SO_0000010

position:6120:1
position: 6120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7118:1
position: 7118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6120-7118:1:exon

Ga0080574_RS24260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24260
old locus tag: Ga0080574_TMP4895
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010138049.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MAAGGLLPDHHPTADFFVCDIFDAAPKDDMGSMEHPMFSLSTRPDRRILSYLHNGVAIQVIPSLRGLATIHDKDVLIYCISQLMAALNAGREISRQVHLKAHDLLVATNRETSGDGYKRLRDALERLAGTRITTNYETGGQEVTSGFGLIESWQIVRRSRGGRMISVMVTLSEWLFRAVQAKSVLTLSRDYFRLRKPLERRIYELARKHCGRQAEWTVSVETLLKKSGSASPRRVFRKMLRDMIAADLLPDYALSEAPGDLIRFSRRDTVILPGEAPQLSPAALDTARERNPGADVYALQAEWLAHWRARGALRLQSPDKAFLGWLAKRGSA
SIO_010081: Ga0080574_RS24260
subclass of: SO_0000673
so part of: Ga0080574_RS24260
location: 6120..7118
location: region:6120-7118:1
so has part: feature:6120-7118:1:exon

WP_076706129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6120-7118:1:exon

Ga0080574_RS24265
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
gene: rfbC
locus tag: Ga0080574_RS24265
old locus tag: Ga0080574_TMP4896
so part of: sequence
location: 7205..7774
location: region:7205-7774:1
so has part: feature:7205-7774:1:exon
subclass of: SO_0000010

position:7205:1
position: 7205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7774:1
position: 7774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7205-7774:1:exon

Ga0080574_RS24265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
gene: rfbC
locus tag: Ga0080574_RS24265
old locus tag: Ga0080574_TMP4896
EC number: 5.1.3.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008209696.1
GO function: GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose 3,5-epimerase
translation: MQIEQTALEGVLLLTPARFGDHRGFFSESWNKKRLADAGLDMPEFVQDNHSFSATVGTVRGLHFQSPPHAQGKLVRCGKGRLYDVAVDIRRGSPTYGQWTGAELSFENGRQLWVPAGFLHGFMTLEPDTEIIYKCTDYYAPDCDGAVRWDSCGIDWPLDGITPVLSEKDERAPALDGFESPFLYEGRAA
SIO_010081: Ga0080574_RS24265
subclass of: SO_0000673
so part of: Ga0080574_RS24265
location: 7205..7774
location: region:7205-7774:1
so has part: feature:7205-7774:1:exon

WP_076706130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7205-7774:1:exon

Ga0080574_RS24270
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
gene: rfbB
locus tag: Ga0080574_RS24270
old locus tag: Ga0080574_TMP4897
so part of: sequence
location: 7771..8823
location: region:7771-8823:1
so has part: feature:7771-8823:1:exon
subclass of: SO_0000010

position:7771:1
position: 7771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8823:1
position: 8823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7771-8823:1:exon

Ga0080574_RS24270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
gene: rfbB
locus tag: Ga0080574_RS24270
old locus tag: Ga0080574_TMP4897
EC number: 4.2.1.46
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014876615.1
GO function: GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-glucose 4,6-dehydratase
translation: MKLLVTGGAGFIGSAVVRQAVAQGHEVVNLDALTYAACLDNVASVADSPLYSFEQADIRDAAAVEACLARHAPDAVMHLAAESHVDRSIDGPGVFIETNVMGTYNLLQSARALWERKGRPESFRFHHISTDEVFGSLPADPEVQFTEDTPYDPRSPYSASKASSDHLVRAWHETYGLPVVLTNCSNNYGPYHFPEKLIPVIILNALAGKSLPIYGDGSNVRDWLYVEDHADALLTVLGRGAVGRSYNIGGENERSNLELVETLCAILDRLRPRADGASYTAQITFVTDRPGHDARYAIDPTRIRTELGWRPSVTIEEGLERTVRWYLDNEAWWRPLQSRDGVGTRIGTKA
SIO_010081: Ga0080574_RS24270
subclass of: SO_0000673
so part of: Ga0080574_RS24270
location: 7771..8823
location: region:7771-8823:1
so has part: feature:7771-8823:1:exon

WP_076706131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7771-8823:1:exon

Ga0080574_RS24275
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
gene: rfbD
locus tag: Ga0080574_RS24275
old locus tag: Ga0080574_TMP4898
so part of: sequence
location: 8841..9713
location: region:8841-9713:1
so has part: feature:8841-9713:1:exon
subclass of: SO_0000010

position:8841:1
position: 8841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9713:1
position: 9713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8841-9713:1:exon

Ga0080574_RS24275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
gene: rfbD
locus tag: Ga0080574_RS24275
old locus tag: Ga0080574_TMP4898
EC number: 1.1.1.133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019294852.1
GO function: GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTDP-4-dehydrorhamnose reductase
translation: MTFLVFGETGQVGRELRRAADAAGQTLEVHGRDTADFTDPEACAALVAASDARAVINAVAYTAVDKAEEDEPRARLVNGDTPGAIARAAAAKGIPLVHISTDYVFDGTGETPFAPDHPTGPLGAYGRTKRAGEEAIRAAGGAHAILRTSWVVSAHGHNFVKTMLRLGAERDRLTIVADQVGGPTCAADIAAACLEIAGQLAADPDKSGSYHFSGAPDVSWAGFAREIFALAGLDCAVEDIPTSAYPTPAARPLNSRMDNSLTESVFGIARPDWRSGLRSILDELGALKTS
SIO_010081: Ga0080574_RS24275
subclass of: SO_0000673
so part of: Ga0080574_RS24275
location: 8841..9713
location: region:8841-9713:1
so has part: feature:8841-9713:1:exon

WP_076706132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8841-9713:1:exon

Ga0080574_RS24280
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
gene: rfbA
locus tag: Ga0080574_RS24280
old locus tag: Ga0080574_TMP4899
so part of: sequence
location: 9737..10612
location: region:9737-10612:1
so has part: feature:9737-10612:1:exon
subclass of: SO_0000010

position:9737:1
position: 9737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10612:1
position: 10612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9737-10612:1:exon

Ga0080574_RS24280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
gene: rfbA
locus tag: Ga0080574_RS24280
old locus tag: Ga0080574_TMP4899
EC number: 2.7.7.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013065920.1
GO function: GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO process: GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-1-phosphate thymidylyltransferase RfbA
translation: MTQRKGIILAGGSGTRLYPITIGVSKQLLPVYDKPMIYYPLSVLMLAGIREIAVITTPQDQEQFQRTLGDGSQWGLSLTYIVQPSPDGLAQAYLLAEEFLAGAPSAMVLGDNIFFGHGLSALLRDADVQGAGGTVFGYRVADPERYGVVAFDADGQVTEIIEKPEVPPSSYAVTGLYFLDGTAPHRAREVTPSARGELEITTLLEMYLAEGALTVQQMGRGYAWLDTGTHGSLLDAGNFVRTLEHRQGLQTGSPDEIAFDQGWISAAALEERAAKFRKNAYGEYLLGLLKG
SIO_010081: Ga0080574_RS24280
subclass of: SO_0000673
so part of: Ga0080574_RS24280
location: 9737..10612
location: region:9737-10612:1
so has part: feature:9737-10612:1:exon

WP_076706133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9737-10612:1:exon

Ga0080574_RS24285
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24285
old locus tag: Ga0080574_TMP4900
so part of: sequence
location: complement(10615..11562)
location: region:10615-11562:-1
so has part: feature:10615-11562:-1:exon
subclass of: SO_0000010

position:10615:-1
position: 10615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11562:-1
position: 11562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10615-11562:-1:exon

Ga0080574_RS24285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24285
old locus tag: Ga0080574_TMP4900
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTASDSQYDRLRQELDEAAQLIRSHAGPQERGTGTAPALPLQSLLDQLHQLQAQTEAQNAAPIRLLKHFACTGGTIISKCLAAMPNAVLLSEIDPLSVNHMTTPSKFAPTDLIKQMRYGRQGISDALAVEIFLGGLAPLHAALKRAGQRLILREHSHSHYCTAADWRARPAVQEMLSRDYAVLPLISVRHPMSSFLSLKAAGWIQFAPATLEEYARRYLAFLDDNATCPIVYYEDFVDTPETVLENICRSLELRYDAQSSALVMAIHMSGDSGRSSDEIAARPARDIPDEIAEQSATSPAYAELCKRLRYPPLPG
SIO_010081: Ga0080574_RS24285
subclass of: SO_0000673
so part of: Ga0080574_RS24285
location: complement(10615..11562)
location: region:10615-11562:-1
so has part: feature:10615-11562:-1:exon

WP_076706134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10615-11562:-1:exon

Ga0080574_RS24290
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24290
old locus tag: Ga0080574_TMP4901
so part of: sequence
location: complement(11559..13418)
location: region:11559-13418:-1
so has part: feature:11559-13418:-1:exon
subclass of: SO_0000010

position:11559:-1
position: 11559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13418:-1
position: 13418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11559-13418:-1:exon

Ga0080574_RS24290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24290
old locus tag: Ga0080574_TMP4901
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVSPDDAPFGSILHLGSGPLLDLADCKARTDTQIAIVEADPARVRDLERQTGDAAHIRILHAALAAEDGEADLRVFNIPALSSTADPTGLQELYPGFRILRRPSVPAMTAQSLIDSLAPLPEPRRLVLDAPGADAGFLAALQALDLLAGFSRIDIRTSQEALFADGQTMAALSEQLTGQGFTVLETDLSDPDWPVRRFGIDRQARAAAALEQQLAEQREHVAALEAAAAKRDKDVDTLETALKDLTATADWRAKRIKELEEDAARAAKEAKTRIDTLETSLRDLTATADARAKRIKELEAGATETAQTLADREQALKDLTATADWRSNRIKELEDDAARTAKEAEGREAALAARIDELTGDAEARATRIAELEAAAVTAAAETETRETALTAQIDELTQTAETRTKRIAELEAAASDRQKRLDTLEAEHRTLTETAETRAKRIKELEQKATETAKTLADREQSLKDLTATADWRAKRIKEIEDEASRAAKDAETREQTLGDKIAALEKQAQQREAQYRQGKTDLSLALRMQTICGNDLRDLQQSHAALQEQKAQQDRLIALLAARLEDASQHLKALSLTEPPAQETGTAPQIPEERKTAPKRKSAAKRKPATRAKKAK
SIO_010081: Ga0080574_RS24290
subclass of: SO_0000673
so part of: Ga0080574_RS24290
location: complement(11559..13418)
location: region:11559-13418:-1
so has part: feature:11559-13418:-1:exon

WP_076706135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11559-13418:-1:exon

Ga0080574_RS24295
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24295
old locus tag: Ga0080574_TMP4902
so part of: sequence
location: complement(13423..15045)
location: region:13423-15045:-1
so has part: feature:13423-15045:-1:exon
subclass of: SO_0000010

position:13423:-1
position: 13423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15045:-1
position: 15045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13423-15045:-1:exon

Ga0080574_RS24295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24295
old locus tag: Ga0080574_TMP4902
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGIDRERCQARFRQSADRALDVFAFSPERCAEALAAGEPLVILHRNARHFLQSALRDGRSASDGLAEWQEACSQILATWRQARRNVLLLEEAALLRSEAGALTRLTALLGAEALTEPAEMPEAASDIFALLADQALAAAPEAAALDMDLEASSLPAPQRVPSLAEVDAAVRAWQALNETTAMLQAGKADAEGRADAIAAERDLLLGHVAELHDEVLGQSGTADTLRRQLLEANGSVETWKKTLAKAETRFAEALAQQERSQAQLSAERDLLLGHIAELHAEVLGQSGTADTLRRQLLEANGSVETWKKTLAKAETRFAETLAQQERSQAQLSAERDLLLGHIAELQRETEAKEQQLRDRAEDIAGLTAERAALRESGDRQRRDMADDMTRKLHAARQTVARQETELTELSAELAKLRQDGAQQRQVQSDEMVRRIQNAQSEAETARQTVAELESALASLTAQNAHHAAQAAALAKELDSARDHWDGILKQAEQRELALRQSLEDLSKEYGKLLASRSWKITEPLRAANTLLGRTKHKEH
SIO_010081: Ga0080574_RS24295
subclass of: SO_0000673
so part of: Ga0080574_RS24295
location: complement(13423..15045)
location: region:13423-15045:-1
so has part: feature:13423-15045:-1:exon

WP_076706136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13423-15045:-1:exon

Ga0080574_RS24300
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24300
old locus tag: Ga0080574_TMP4903
so part of: sequence
location: complement(15216..16262)
location: region:15216-16262:-1
so has part: feature:15216-16262:-1:exon
subclass of: SO_0000010

position:15216:-1
position: 15216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16262:-1
position: 16262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15216-16262:-1:exon

Ga0080574_RS24300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24300
old locus tag: Ga0080574_TMP4903
inference: COORDINATES: protein motif:HMM:NF013048.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008417 - fucosyltransferase activity [Evidence IEA]
GO process: GO:0006486 - protein glycosylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 10
translation: MRIHIMGRHAHRTPFAYEPYKRLFRQRFDYVDTPEKADVILFGYVLNIDENAEELARLVKANPALRLVVVSEEPLWDTTNSGDFRKRHNIRKTGDHAFAFSAINHHTSKVYEFRSLPYFLTTEDEYYLRYAYEFGRNAAMAPGAFAEIWKQAGIRYAFFAENRDLVKKYSIAHPDIETYGLSVYRTDVAKAMPDKGTMRVGQGWGAKVTRQELPDWHLDKLLTLQGKSYIVSAIENTSQRNYISEKIFDAYACRGLPLIWAPASHRIHEFAPAGSCLNLFELSPADAAKKITGFKPTAATFEAYAEAQAGLYERFRKFDDFLDERIGFYERLSDELTAIVEEKPAPLP
SIO_010081: Ga0080574_RS24300
subclass of: SO_0000673
so part of: Ga0080574_RS24300
location: complement(15216..16262)
location: region:15216-16262:-1
so has part: feature:15216-16262:-1:exon

WP_076706137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15216-16262:-1:exon

Ga0080574_RS24305
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24305
old locus tag: Ga0080574_TMP4904
so part of: sequence
location: complement(16267..18276)
location: region:16267-18276:-1
so has part: feature:16267-18276:-1:exon
subclass of: SO_0000010

position:16267:-1
position: 16267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18276:-1
position: 18276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16267-18276:-1:exon

Ga0080574_RS24305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24305
old locus tag: Ga0080574_TMP4904
inference: COORDINATES: protein motif:HMM:NF015007.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exostosin family protein
translation: MKKAIHLYTPYYLSDDHERQKELDLCLKKNVETKEVDRIFLMVDDGHEPPIKSDKITVLPIPARPTYRDWLDLTERHSTGALSVLANSDIYLDKTVTELHKVFDASGHALAAISRYEIEGDKITMHKNPQWSQDVWVVDGTVPVPDQIKQKMTIPLGVPRCDNKIGYVFSVHGYDIFNPCKFVRTYHLHETQLRAYDNHVDKRILGGIAWVYPSETITEPSKMVFDVWTLKPEPVERIKVNDTIIVKEKQGLGQPKRKKSDLIVAYDHNWQFPAITEQHAFNMLSERLDARHADGRVLYFAFPWATLIDNLLHNKKNPEKTAFLKQKLLSFKPRLAAAETVVTTCQHIHMLRFQSLFDEMGITDIFWSHAVKTQPALPEHKGIALHPFPLYPVQAKDIWNEPPLRKKHLYSFVGAKANQYYLTQSRNIIIDELTKTNTGLIVGNDTWHYNKVVYDYQVRGLADKPDALVDNKASDNFKQILRESVFSLCPSGTGPNSIRLWESIGLGSIPVILADNLALPGNPALWEQAAVFCKEDKASILKLPGVLKKIHADPQMLQRKRHAMAQIWKLYGIENFVHDIQKLILERSQDAAQRPARAAAAAAPAPASGPLSLNSITTDILLTPEKAKARLKKEKPLIQDLLGKASAAQKDIFARALETRNLKTDWDQA
SIO_010081: Ga0080574_RS24305
subclass of: SO_0000673
so part of: Ga0080574_RS24305
location: complement(16267..18276)
location: region:16267-18276:-1
so has part: feature:16267-18276:-1:exon

WP_076706138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16267-18276:-1:exon

Ga0080574_RS24310
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
gene: gmd
locus tag: Ga0080574_RS24310
old locus tag: Ga0080574_TMP4905
so part of: sequence
location: 18761..19882
location: region:18761-19882:1
so has part: feature:18761-19882:1:exon
subclass of: SO_0000010

position:18761:1
position: 18761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19882:1
position: 19882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18761-19882:1:exon

Ga0080574_RS24310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
gene: gmd
locus tag: Ga0080574_RS24310
old locus tag: Ga0080574_TMP4905
EC number: 4.2.1.47
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009504508.1
GO function: GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-mannose 4,6-dehydratase
translation: MTKKALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASLFNTGRVDHIYQDPHVTNQNFKLHYGDLTDTSNLTRIMREVEPDEVYNLGAQSHVAVSFEAPEYTADVDGIGTLRLLESIRFLGLEKKTRFYQASTSELFGLVQEIPQKETTPFYPRSPYAVAKMYAYWITVNYRESYGIYACNGILFNHESPRRGETFVTRKITRGLSNIAMGLEPCLFMGNIDSLRDWGHAKDYVRMQWMMLQQDEAVDFVIGTGVQYSVREFIDWTAKELGIELEFSGEGVDEIATVKSVDNAIAPAVKPGDVIMRIDPRYFRPAEVETLLGDPAKAKEKLGWVPEITAQEMCAEMVAEDLKTAKRHALLKESGFELPISVEH
SIO_010081: Ga0080574_RS24310
subclass of: SO_0000673
so part of: Ga0080574_RS24310
location: 18761..19882
location: region:18761-19882:1
so has part: feature:18761-19882:1:exon

WP_076706139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18761-19882:1:exon

Ga0080574_RS24315
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24315
old locus tag: Ga0080574_TMP4906
so part of: sequence
location: 19895..20707
location: region:19895-20707:1
so has part: feature:19895-20707:1:exon
subclass of: SO_0000010

position:19895:1
position: 19895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20707:1
position: 20707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19895-20707:1:exon

Ga0080574_RS24315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24315
old locus tag: Ga0080574_TMP4906
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEVHHSPVRTIHHFACSGGTVVSKCIAVCGDSFFLSEVNPLAPYNDIKFAPLDLLSQLQAQYRNMTKQYRMEFFGDQMRLLARISDQAKRPICLRDHTHSSFFRPGGVHESELLEALKVLGYDTLSVATVRHPVDAFAAMLKNKWAGGIQNSFEIYCTKLMAFLDYCERREVGLWRYEDFCLKPAETLGQICERLALPFNENFLEDFQNIKLSGDSGRRSADIHLRTRRSIAPDLAAEAADSELYHTVCSRLGYTAAVDEYPLQRDFQSH
SIO_010081: Ga0080574_RS24315
subclass of: SO_0000673
so part of: Ga0080574_RS24315
location: 19895..20707
location: region:19895-20707:1
so has part: feature:19895-20707:1:exon

WP_076706140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19895-20707:1:exon

Ga0080574_RS24320
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24320
old locus tag: Ga0080574_TMP4907
so part of: sequence
location: 20757..21722
location: region:20757-21722:1
so has part: feature:20757-21722:1:exon
subclass of: SO_0000010

position:20757:1
position: 20757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21722:1
position: 21722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20757-21722:1:exon

Ga0080574_RS24320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24320
old locus tag: Ga0080574_TMP4907
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009504503.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-L-fucose synthase
translation: MKIYIAGHRGMVGGAILRRLQARKEAGEDLTLITRTHAELDLTSQDAVRGFMEAETPDVVILAAAKVGGIHANNTYPAEFIYENLMIECNVIHQAFAAGVTRLLQLGSSCIYPKAVPQPMKEDALLTGTLEPTNEPYAIAKIAGIKLCESYNRQYGVDYRSVMPTNLYGPGDNFHPENSHVLPALIRRFHEAAQNGTEEVVIWGSGKPMREFLHVDDMAEASLFVLDLDKATYEANTEPMLSHINVGTGTDISIMDLARMVAKVTGYTGRIANDPSKPDGTMRKLMDVTRLADMGWSARIPLEEGVRETYEWFKEAEGLRL
SIO_010081: Ga0080574_RS24320
subclass of: SO_0000673
so part of: Ga0080574_RS24320
location: 20757..21722
location: region:20757-21722:1
so has part: feature:20757-21722:1:exon

WP_076706141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20757-21722:1:exon

Ga0080574_RS24325
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24325
old locus tag: Ga0080574_TMP4908
so part of: sequence
location: 21719..23074
location: region:21719-23074:1
so has part: feature:21719-23074:1:exon
subclass of: SO_0000010

position:21719:1
position: 21719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23074:1
position: 23074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21719-23074:1:exon

Ga0080574_RS24325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24325
old locus tag: Ga0080574_TMP4908
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: discoidin domain-containing protein
translation: MTVAGSPERDMLDMDDLIDVAARGRIHTAAAGEGAEHALWQIDLLQPLTLQSIAIAMAGPAPDRMPQLDVSLDAQNWHTVTCGTAPSGLAATGPLIARHVRLSGAGQDGLALDSVALLATRRDVILSDFAREKEARLLPETAGAAPGKPPYGLTTAGSPRDDSIAGLKIRRYGRFGNNLIQIVNAIYLARHLGVRDIVAPEIGLGGALTDVEKDGIRLISDSSPAADGLYLEGDFFRLEVFGQELKAGLTNVRQYEIAQKYIVPYLGLLDTPDEERRSRSSELVFHIRSGDIFSPNPHPGYVQPPLSYYTTILDDLRARGLIDRVCIVSEDRLNPCIGALEAHVAAQGLPLRMQSGTLAEDVGYLLGATHVVFGFGTFGYGICLLAENFASVHVFGMAKYGGLSNIGALKVLSTPPGEYIDAGQWNGKPEQLRKMLEFPAEKLLVSWHDGK
SIO_010081: Ga0080574_RS24325
subclass of: SO_0000673
so part of: Ga0080574_RS24325
location: 21719..23074
location: region:21719-23074:1
so has part: feature:21719-23074:1:exon

WP_076706142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21719-23074:1:exon

Ga0080574_RS24330
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24330
old locus tag: Ga0080574_TMP4909
so part of: sequence
location: 23186..23953
location: region:23186-23953:1
so has part: feature:23186-23953:1:exon
subclass of: SO_0000010

position:23186:1
position: 23186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23953:1
position: 23953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23186-23953:1:exon

Ga0080574_RS24330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24330
old locus tag: Ga0080574_TMP4909
inference: COORDINATES: protein motif:HMM:NF022760.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MQINNFLVIRFSLRLKEEWLRKAYGDEENRYGWLEMRGRIFKETLYRSLLEQSVRPKRVFLLLDVRDEEFYHACLNDLDEMIEPIFSKNWNHYEQVADRISASGLTNIAVSRCDSDDLVATDYFEKVNAAIRTATEKGESFEYVVATRGFISDGVNIQETYYSCSPFLTIFEKEWNGANVYGIGHENVVKHSHIAVSDARWMQYIHGTNIANSFSAVDADREAFEAAIRQAPKRTSMKRCPVAEFWPDGFHKVPA
SIO_010081: Ga0080574_RS24330
subclass of: SO_0000673
so part of: Ga0080574_RS24330
location: 23186..23953
location: region:23186-23953:1
so has part: feature:23186-23953:1:exon

WP_076706143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23186-23953:1:exon

Ga0080574_RS24335
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24335
old locus tag: Ga0080574_TMP4910
so part of: sequence
location: 24026..24811
location: region:24026-24811:1
so has part: feature:24026-24811:1:exon
subclass of: SO_0000010

position:24026:1
position: 24026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24811:1
position: 24811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24026-24811:1:exon

Ga0080574_RS24335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24335
old locus tag: Ga0080574_TMP4910
inference: COORDINATES: protein motif:HMM:NF022760.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MEINNFIVVRFSLKISAGWQKKAYGDEENREKWLIHRYRILRDTIYTSALRQTVRPRKLVLLLDEGDAETYEKHFAFDSDLVQPVFAKKGAPYEAGVEYIRSTGLKNIVISRADSDDIISDDYIEKVNAEVTRLVEAGQPFDYIVATHGYRTDGDVIQEIYYSCSPYLSLFREEWDGKNIYDINHEDVLQYAYFPIESARWMQCIHGGNLANQFMNGMADRQSFEDSIRNNKKLIAMQRVSAKDNWPENFGVYNLAFPESF
SIO_010081: Ga0080574_RS24335
subclass of: SO_0000673
so part of: Ga0080574_RS24335
location: 24026..24811
location: region:24026-24811:1
so has part: feature:24026-24811:1:exon

WP_076706144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24026-24811:1:exon

Ga0080574_RS24340
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24340
old locus tag: Ga0080574_TMP4911
so part of: sequence
location: 25019..26440
location: region:25019-26440:1
so has part: feature:25019-26440:1:exon
subclass of: SO_0000010

position:25019:1
position: 25019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26440:1
position: 26440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25019-26440:1:exon

Ga0080574_RS24340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24340
old locus tag: Ga0080574_TMP4911
EC number: 2.7.7.13
EC number: 5.3.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008225762.1
GO function: GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
translation: MITPILLCGGSGTRLWPLSRKSYPKQFAKLMSDESLFQASARRLSGPGFSAPVVLTGDPFRFIVTEQLAAVEMGPQGILIEPEGRNTAPAILAAALWLAEQDPEALMLVAPSDHVIPEAERFRAAVQAAAPRALAGDLVTFGITPTRPETGYGYLELAAGADTAAEAPQSLARFVEKPDAERAAEMLAAGNFLWNAGIFLFTAKTLISAYGAHAPALLTAVEAALAGATADLGFTRLAPEAWAGAEDISIDYAIMEKADNLAVMPYGHAWSDLGGWDAVWMESPQDETGNACSQHATAIDCSGTLLRSETEGQEVVGIGLEDMMVVAMSDAVLVAPKAEAQRVKEAVSALKAKGVSQAVQLPRDYRPWGWYESLIVGGRFQVKRIVVHPGAALSLQSHHHRSEHWIVVEGTAQVTVDEDVRLVTENQSVYIPLGAVHRMENPGKVPMVLIEVQTGSYLGEDDIIRYEDVYARS
SIO_010081: Ga0080574_RS24340
subclass of: SO_0000673
so part of: Ga0080574_RS24340
location: 25019..26440
location: region:25019-26440:1
so has part: feature:25019-26440:1:exon

WP_076706145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25019-26440:1:exon

Ga0080574_RS24345
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24345
old locus tag: Ga0080574_TMP4912
so part of: sequence
location: 26506..27681
location: region:26506-27681:1
so has part: feature:26506-27681:1:exon
subclass of: SO_0000010

position:26506:1
position: 26506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27681:1
position: 27681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26506-27681:1:exon

Ga0080574_RS24345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24345
old locus tag: Ga0080574_TMP4912
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010138045.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide sugar dehydrogenase
translation: MSGTKIAVAGIGYVGLSNAVLLAQHNEVRALDISQERVDMLNARQCPIIDAELEAYLAEKPLGLTATTDPEEAFAEAEFVIVATPTNYDPETNFFDTSSVETVIETVTRLNPDATIIIKSTIPVGYTRGLSEKMGTGQVIFSPEFLREGRALYDNLHPSRIVVGERSERAERFAHLLVEGAEEEDIPVLFTESSEAEAIKLFANTYLAMRVAFFNELDSYALSHGLSTRQIIDGVSLDPRIGGHYNNPSFGYGGYCLPKDTKQLLANYSEVPQNLIRAIVDANRTRKDFIAEQVLARNPRRVGIYRLVMKAGSDNFRQSSIQGVMKRIKAKGIEVVVYEPALEEENFFGSEVSHDLDGFLRSCDVIIANRQTEELARVADKVFTRDLFGAD
SIO_010081: Ga0080574_RS24345
subclass of: SO_0000673
so part of: Ga0080574_RS24345
location: 26506..27681
location: region:26506-27681:1
so has part: feature:26506-27681:1:exon

WP_076706146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26506-27681:1:exon

Ga0080574_RS24350
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24350
old locus tag: Ga0080574_TMP4913
so part of: sequence
location: 27709..28749
location: region:27709-28749:1
so has part: feature:27709-28749:1:exon
subclass of: SO_0000010

position:27709:1
position: 27709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28749:1
position: 28749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27709-28749:1:exon

Ga0080574_RS24350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24350
old locus tag: Ga0080574_TMP4913
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008282312.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008417 - fucosyltransferase activity [Evidence IEA]
GO process: GO:0006486 - protein glycosylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 10
translation: MITFAALGDYAHRQPLAYAQIRARCLGDIRVVADPARADIVAVAHSKDLDRHAPALRQLSADQRLVLLSEEPFWDTIWGHDPLRRDLRHPAPDGPLPVTQLNHRTSRLYAFDRIPYFLLTDGHFRTRYALWFGRNARKSPRDWQAHFAALPGQAAFMMARRVSPRYEVAFPGSSLRSLCNQRSAIAEACQGPGFAHMGKGWPDNTIRQALVDWHLEKYLALRGRFRFVSAIENTHEPAYVTEKLFDAYALGSVPLYMAGPDHRVRELAPDPESWVNLWDTAPERVPERLSAVAFGPAFCDAYTAQQQRLAELFRDRATLDAELDRLRAALVAEFAAVLGSGLIANR
SIO_010081: Ga0080574_RS24350
subclass of: SO_0000673
so part of: Ga0080574_RS24350
location: 27709..28749
location: region:27709-28749:1
so has part: feature:27709-28749:1:exon

WP_076706147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27709-28749:1:exon

Ga0080574_RS24355
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24355
old locus tag: Ga0080574_TMP4914
so part of: sequence
location: complement(28733..29490)
location: region:28733-29490:-1
so has part: feature:28733-29490:-1:exon
subclass of: SO_0000010

position:28733:-1
position: 28733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29490:-1
position: 29490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28733-29490:-1:exon

Ga0080574_RS24355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24355
old locus tag: Ga0080574_TMP4914
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611905.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MSDLFWLSDAQMARLAPFFPKSHGKPRVDDRRVLSGIIFVNRNGLRWRDAPAAYGPHKTLYNRWKRWSDKGVFARMMAGLAAEHGEQKTVMIDATYLKAHRTATSMGGEKGGRGRLIGRTKGGMNTKLHAVCDSQGRPLDLFVTAGQVSDYIGARALVGSLPKVEWLLGDRGYDADWFRETLKDKGIRACIPGRKQRKKPVKYDKRRYKRRNRIEIMFGRLKDWRRVATRYDRCPKVFLSAIALAATVIYWL
SIO_010081: Ga0080574_RS24355
subclass of: SO_0000673
so part of: Ga0080574_RS24355
location: complement(join(28733..29169,29169..29490))
location: region:28733-29490:-1
so has part: feature:29169-29490:-1:exon
so has part: feature:28733-29169:-1:exon

WP_156876251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29169-29490:-1:exon

position:29169:-1
position: 29169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28733-29169:-1:exon

Ga0080574_RS24365
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24365
old locus tag: Ga0080574_TMP4916
so part of: sequence
location: complement(29554..30066)
location: region:29554-30066:-1
so has part: feature:29554-30066:-1:exon
subclass of: SO_0000010

position:29554:-1
position: 29554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30066:-1
position: 30066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29554-30066:-1:exon

Ga0080574_RS24365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24365
old locus tag: Ga0080574_TMP4916
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAPLPRDLSDLQSALRAKLEEAELLAMTSLDEIETLTTLLGQLTAPGSGTEDKSGAESAAREEMRHRLAGALQRPASPQVAAPERQKAALMADPLFDATWYLQTYPDVAESGMDPAAHYLSAGAFEGRDPGPAFDTIAYYLANPDIADAGWPALSHYLMFGRAAGRRLA
SIO_010081: Ga0080574_RS24365
subclass of: SO_0000673
so part of: Ga0080574_RS24365
location: complement(29554..30066)
location: region:29554-30066:-1
so has part: feature:29554-30066:-1:exon

WP_076706149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29554-30066:-1:exon

Ga0080574_RS26765
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS26765
old locus tag: Ga0080574_TMP4917
so part of: sequence
location: complement(30192..39458)
location: region:30192-39458:-1
so has part: feature:30192-39458:-1:exon
subclass of: SO_0000010

position:30192:-1
position: 30192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39458:-1
position: 39458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30192-39458:-1:exon

Ga0080574_RS26765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS26765
old locus tag: Ga0080574_TMP4917
inference: COORDINATES: protein motif:HMM:NF012573.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium-binding protein
translation: MAVIGGTGGNDPLAGTNNPDTINGLGGNDQLVGHGGNDALSGGAGGDTLVGGAGNDTLDGGTGSDRVFYFRETGPSGILADLETGRVTDTWGDTDTLIGIEWLYGSALNDTIRGFSSGNDLIFGNSGNDSIDGRGGDDVLIGDQGNDTLQGGAGSDQAAYFFETGSLGISVNLIAGTATDTWGHTDTLFNIERIIGSDHADTLRGSAAADYFHGHAGADLLETYSGEDTLVGGAGADTLRGGGGADMVGYFLEGGGSGVTVDLRAGTATDSWGDSDTLEGIEYVHGTDHGDTLLGSDAHGDRFFGYAGDDYMDGRDGNDLYYTGAGNDTIVVGGTIADARDTIVVNGAGHNTVIGGDSEGTQYGHHIVFTLNEAVTVNLATGLASSASMTTDFSAALYFLEVNGTMHDDLLVGGNPRFDYLEWYTGNQGNDTIDGGSGTADTVVYQPEEEIGSYNFDLGRVEYGTMGVVVNLATGVARDTFGDTDTLINIDHVRGTRFADAITGSAEGNAFWGLQGNDTFNGGAGEDTVHYGEDYLRGGTAGVTVNLFNQTGIDGYGNTDTLISIEHVHATARNDFLTGDNAGNRLFGEEGNDTLVGHGGRDVLVAGAGNDALRGGAEHDELVGDAGNDTLDGGEGDDLARYRDDPAGISADLLTGRVADGYGGTDTLINIEGIHGSDHGDTLSGDAGANEFSGFGGNDLIESRTGADTLLGGDGRDTLRGGGGNDELWGQAGTDTLDGGAGVDLVRYRDSAAGVSASLASGSAQDGFGGTDTLLNIEGIHGSDHGDTLTGDAGGNELSGFGGNDLLDGQGGDDTLLGGAGRDTLLGGTGADEIWGEAGDDTLDGRGGFDLARYGNSASGVTADLAAGSAQDGFGGTDALSNIEGLHGSDHGDVLRGDAGGNELSGFAGNDTLQGQGGADTILGGDGNDSIQGGAGNDEIWGQGGFDTIDGGSGSDLIRYRQDSAGVTVDLSASSAQDGAGNTDVLQNIENVDGSDYGDVLSGDSGGNRIFGYAGNDTVSGFGGADTIRGGAGHDSLSGGDGNDELWGEAGNDTLSGGAGTDLARYRATTGGVTVDLNAGQALDGYGTQDSLTGIENVHGSDYGDVLRGTSGENELRGFAGNDNISGFGGHDTLLGDTGNDTLSGGAGEDELWGGAGNDTLDGGAGRDLARYRDDTSGVTVDLAAGQALDGFGGSDALTGIEGAHGSDYGDTLRGDGGDNELFGFGGGDLLQGGTGNDTLTGGDGSDTLQGGAGTDLLSGDGGSDTIDGGDGTDVVRYRDDSTGVTVNLISGQALQGGSALDTLFNIENAHGSDHGDRLTGDVAANELSGFAGNDTITGNGGNDTILGGAGNDSLSGGSNNDEIWGEAGDDTIDGGAGSDLIRYRSAGAGVVADLAAGTAQDGDGGTDSLLNIENAHGSDHGDRLSGDADDNELSGFAGRDTLTGNGGNDTILGGTGNDSLSGGSGDDEIWGEAGDDTIDGGVGSDLIRYRSDTGGVSVDLTAGSATDGSGGSDVISGVENVHTSDYGDVVRGSAGANRIFGFAGDDTLRGEAGSDTLLGDGGSDVIEGGDGDDEIWGGGGDDTLSGGSGADLVRYRDAIGSVSVNLVTGDAQDGFGSADVLSGLEHVDGSDFSDNITGDGAGNRLFGFDGNDTISGNGGADTILGGAGNDSLSGGSGNDQIWGEAGDDTIDGGAGTDLVRYRGATSGLVVDLILGTVSGEGRDLLSGIENIDGSDQADLFIGSSAVNVLSGFGGADTFIGGAGNDVLSGRQGGDRYEFSAGDGYDVVNDLGDGSGTDRVVFHDYYARNATIIRQNPANEAILISFGATGDAVVLANTLNAGHSGAIEQIEWADGTVWTHADLIAALGQQGVVDSTGPTHQDNLLNRTSGDDVTDALGGNDLVRGLGGDDSLSGSDGNDTLIGGEGNDTLRGGDGNDRLEGGPGDDVKDGGAGTDTAVYGVTLSDAVVTLSGGVFTISSHLGTDRVSNVENFVFEDVTLD…
SIO_010081: Ga0080574_RS26765
subclass of: SO_0000673
so part of: Ga0080574_RS26765
location: complement(30192..39458)
location: region:30192-39458:-1
so has part: feature:30192-39458:-1:exon

WP_083716987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30192-39458:-1:exon

Ga0080574_RS24405
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24405
old locus tag: Ga0080574_TMP4919
so part of: sequence
location: 39717..40973
location: region:39717-40973:1
so has part: feature:39717-40973:1:exon
subclass of: SO_0000010

position:39717:1
position: 39717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40973:1
position: 40973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39717-40973:1:exon

Ga0080574_RS24405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24405
old locus tag: Ga0080574_TMP4919
inference: COORDINATES: protein motif:HMM:NF016464.2
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase 61 family protein
translation: MSWVDTMRMTKSAGDGATDRPGSSPAISGGPRIFTYHNQGLPEMTRFADIPVVPVTENNGMVLRGGPVWPDWRAAGPLRHNRSGQPVDRFPPALPGQQADFDAPATWGGHCVDHFGHFVAEHGTRILQARSSHGDKVMLFTLERGKTAAQLPRFFWQTLSWYGVAGEQVRFVHQPLRVAELWAAPMAEQWAHVPTSQGYLDLLDANTEARGLTPKPNSVVYVSRAAMEATAEGHGAGEPYLNQALEQLGVTVIRPEAMPLAEQLAYYQGADLLIFAEGSAMHGRQLLGRRDQTVVVLNRRPGMRIGLSALQPRVSKLIYVEATRGTASVLWPSGKPWIVRAISLYDTETLIGAFEALGIPLSRVWDERAYLEARDRAIRNWIRIRLDPRQPIDHAASARQVRTDFGNLGLDHLIDELP
SIO_010081: Ga0080574_RS24405
subclass of: SO_0000673
so part of: Ga0080574_RS24405
location: 39717..40973
location: region:39717-40973:1
so has part: feature:39717-40973:1:exon

WP_076706150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39717-40973:1:exon

Ga0080574_RS24410
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24410
old locus tag: Ga0080574_TMP4920
so part of: sequence
location: 40982..42805
location: region:40982-42805:1
so has part: feature:40982-42805:1:exon
subclass of: SO_0000010

position:40982:1
position: 40982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42805:1
position: 42805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40982-42805:1:exon

Ga0080574_RS24410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24410
old locus tag: Ga0080574_TMP4920
inference: COORDINATES: protein motif:HMM:NF012745.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family A protein
translation: MDVIQRDWLRSRLQRSGLFDPAFYTAEYPDVAQTGIDPLRHFLRYGMALGRRPGPGFDPIFYAAEYPDVAGGEPAALWHFLSHGAQEGRQPTRQAAQVRRGLTRIRQLQALLWGGLEDSAETELAALHDDFGQPDSVRLEAGTQLAAWYDFTGRDARARAVLESMESLPERFARTAARLIPLAMLYLKDGRRRAARQALDAIHPEEHDNHRVLALADLEEGQARIDRINGIFSARDLAALRLRDPAAGAGLANLTADPCEPATDHGRVSVILPAWQAADRIATAIGSLQAQSYRNLEIIVVDDASTDGTFDLVTAMAREDDRIVPLRQAENGGPYAARNLGLAQARGDFIATHDADDWSHPQKLALQVAELAGDPALTGVIAHWARVRPGLEITTNWRLGAQLMQWSHSSFLFRRGVAERLGGWDAVRVSGDMEYIWRVQAAFGPDSVRRILPDVPLAFAADDAGSLTRNPLTHVRSTYGGLRHYYREICRYWHARAPQGLSPEQQAGKWTMLPAAILPGQDGSDRVDTLLLGDCCDPRVLAEMARIAAERDPGRIGLAHRPDPGFTERRIGYAMEFPEPFFELLQRANVCIACPEDRVRAARRIAL
SIO_010081: Ga0080574_RS24410
subclass of: SO_0000673
so part of: Ga0080574_RS24410
location: 40982..42805
location: region:40982-42805:1
so has part: feature:40982-42805:1:exon

WP_076706151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40982-42805:1:exon

Ga0080574_RS24415
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24415
old locus tag: Ga0080574_TMP4921
so part of: sequence
location: complement(42818..43933)
location: region:42818-43933:-1
so has part: feature:42818-43933:-1:exon
subclass of: SO_0000010

position:42818:-1
position: 42818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43933:-1
position: 43933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42818-43933:-1:exon

Ga0080574_RS24415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24415
old locus tag: Ga0080574_TMP4921
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010441503.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2793 domain-containing protein
translation: MSQLSPRIGLPFLAPSQAQKHVTHNEALQRLDAVTQLCLEGFSDTTPPALPAEGDIHGLGAGATGAWAGHDGELAYWDGSAWLFLPPQEGWRGWGRTEQALRIWHDGAWQGVTDGIDRLGVNTAADGVNRLAVASEASLLSHDGAGHQLKLNKATSGDTASLLFQSGWTGHAEMGLAGQNGWSLKVSPDGSAWTTALQADAASGILDGAAVQQTAADVTPGRLMRADYGYGPGNLLGTVAQSGGLPTGAVIERGGNANGDYVRFADGMQICTFATTTGSVTAHGSGTAGDPYRSASLTWTFPAAFTGTPIISGTAALPAAVSANNGRRSLSVSPSTSIYSSVAYSIFITRHGSDANPDVPELWLTATGRWD
SIO_010081: Ga0080574_RS24415
subclass of: SO_0000673
so part of: Ga0080574_RS24415
location: complement(42818..43933)
location: region:42818-43933:-1
so has part: feature:42818-43933:-1:exon

WP_076706152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42818-43933:-1:exon

Ga0080574_RS24420
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24420
old locus tag: Ga0080574_TMP4922
so part of: sequence
location: complement(44055..44999)
location: region:44055-44999:-1
so has part: feature:44055-44999:-1:exon
subclass of: SO_0000010

position:44055:-1
position: 44055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44999:-1
position: 44999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44055-44999:-1:exon

Ga0080574_RS24420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24420
old locus tag: Ga0080574_TMP4922
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002724804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MTDDSSPQIAILLATYNGADGLRAQLDSHAAQTVPPSLILISDDGSTDGTRAVIGAFAEAHPGLRVVLLDGPGTGAAQNFLNLLRHCPDWVDFAAFSDQDDVWLEDKLARGLAALRAAGAGDARPRLFCGRSWECDATLRRRRLSPGLRRPPGFRHALVQNLASGNTMMLDRAGLALLRGASREAGELVVHDWWVYQMVAGAGGEVIFDPRPLLLYRQHGGNLIGANRGLRAKRRRLRMLFAGRFRRWNTINIAALRASAHRLTAENREILQRFADGRDGPLPARLAMLRRTGLYRQGWQAQLSLYLAALLRRI
SIO_010081: Ga0080574_RS24420
subclass of: SO_0000673
so part of: Ga0080574_RS24420
location: complement(44055..44999)
location: region:44055-44999:-1
so has part: feature:44055-44999:-1:exon

WP_076706169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44055-44999:-1:exon

Ga0080574_RS24425
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24425
old locus tag: Ga0080574_TMP4923
so part of: sequence
location: complement(45016..47823)
location: region:45016-47823:-1
so has part: feature:45016-47823:-1:exon
subclass of: SO_0000010

position:45016:-1
position: 45016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47823:-1
position: 47823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45016-47823:-1:exon

Ga0080574_RS24425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24425
old locus tag: Ga0080574_TMP4923
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF025025.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MHAADRLPPGTAQDSFDAVWYLQANADVRASGMDPWDHYRRVGRAEGRPGAPVRALELDHLLWRGYEAEALPELERLLAEGAPRERSVAGWVLARWYLEQGRGDAAWAAIQAFHAVPEGRGTLRHPGPYLLAVQLALSNGDPVAAEWLIGEGLARFGPLPDFDLAAIQLARARYADDWEIAGHLARLYIRQGLQPVGIAETAEGARFDRLCPPGAPPPVEAAGALPLVSVIVPVFNGAAGLGHALRGLRGQSWRNLEILVVDDGSTDDSRAIAEAQAAEDGRIRVIALGRNEGAYPARNAGMEAARGAFVTVHDADDWSHPQKIEMQMRPLLAEPGLRASVSHWVRAGDDLEMTRWRMEDRWVYRNVSSLMIRAALRDEIGYWDRVTVNADTEYYYRIIAAYGPQSIREVCPGVPLAFGRTAPGSLTNRSATHLRTQFRGVRRDYMEAAHYWHAQAGELGDFHLPQHPDRRPFRVPPEIGLGDPEPEPSDFDIVSASPLFDADWYRLSFPDVLRADISPARHYLTGGARENRDPGPLFSSGGYRQAQGLDGDTVPLLHYERQGRSAGAVPLPGFAGALAGPEEEGPVRLVFAHTSGKTLFGAERSLLGVVGRMAQRGDRPVVVLPALRNTAYLEALLEITAAVEIVPQIWRHMQRPPLPATVGVMRDLIRKYRPAEVHVNTIVLDAPLAAARQEGVPSVVYVRELLAEDVGLCRNLGGSAEALRAALLKEADRFVATSAPVADWLACPERTVIRPNSVDPALFDLPFTPGRALNVAMVSSNTAKKGISDFLAVARLAEAMGRPLRFRLIGPPTPDLHLMRPWPENVEFRGYAETPAEAMAQADIVVSLSKFAESFGRTVVEAMAAGRPVICYDRGAPPTLVESGVSGFVVPADDREGAANAILALEAARAQLLRMSDAARRRARALQAQAFGTLP
SIO_010081: Ga0080574_RS24425
subclass of: SO_0000673
so part of: Ga0080574_RS24425
location: complement(45016..47823)
location: region:45016-47823:-1
so has part: feature:45016-47823:-1:exon

WP_076706153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45016-47823:-1:exon

Ga0080574_RS26340
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS26340
old locus tag: Ga0080574_TMP4924
so part of: sequence
location: complement(47835..48401)
location: region:47835-48401:-1
so has part: feature:47835-48401:-1:exon
subclass of: SO_0000010

position:47835:-1
position: 47835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48401:-1
position: 48401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47835-48401:-1:exon

Ga0080574_RS26340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS26340
old locus tag: Ga0080574_TMP4924
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAPDAQNDTSTAPGEKTPEQSHGEIQQLLRAEIDGLREILETRFREVAALTGRLEEIAGEARREADQEIALLKRRHEVELALVHVRTASWQNGPADGVPAFARQIEILGESPLFDPSWYLQTYPDVVESGMSPKEHYVRAGAFEGRNPGPEFDTMAYYVANPDIAHAGWPALVHYAAFGKADGRPVA
SIO_010081: Ga0080574_RS26340
subclass of: SO_0000673
so part of: Ga0080574_RS26340
location: complement(47835..48401)
location: region:47835-48401:-1
so has part: feature:47835-48401:-1:exon

WP_076706154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47835-48401:-1:exon

Ga0080574_RS26770
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS26770
old locus tag: Ga0080574_TMP4925
so part of: sequence
location: 48633..50132
location: region:48633-50132:1
so has part: feature:48633-50132:1:exon
subclass of: SO_0000010

position:48633:1
position: 48633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50132:1
position: 50132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48633-50132:1:exon

Ga0080574_RS26770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS26770
old locus tag: Ga0080574_TMP4925
inference: COORDINATES: protein motif:HMM:NF012573.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDRLSFQSFLTEGRTMVFDQLWTSVTGDAVHLWAGSSSGSGLLGLALRDGSTPQLRSTTWLTGSGGATLLLQDMSYTEDGVAAGQDRMLISSGIAGGAQFYTVGPGGGLTGSGALTDAANRPLSVSEFTCFEQQGQSYMAAASGAREGLSLYRLSEGMSRATLLDSVTDTPKSTATGISDVLSFEQGGTRFVLSASGTEDGLSVYAVTGGQLELRDTLGPKDGLWIDGLEDVALLSAGGQTFAIGLSALSGTLSAVRINPMGVLFVEDILHDSLDTRFGGARAMDTFEAAGRSFIVAGGNDGGLALIELLPGGALYHHQSIVQDAGWDIGAIQGLQAEVLGNELQLFVSGAAAPGIVRLSMPLADIGPLQQGGGGNDALSGGASDDLLMGRWGNDTLIGGAGDDTLFAGPGADRLTGGAGADVFVLTADGQVDRITDFQPGTDRIDLDDWGMVYDISALRFTATNWGGRIFWQDQQVDIYLEGGGSLDPALWSQDDFLF
SIO_010081: Ga0080574_RS26770
subclass of: SO_0000673
so part of: Ga0080574_RS26770
location: 48633..50132
location: region:48633-50132:1
so has part: feature:48633-50132:1:exon

WP_076706155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48633-50132:1:exon

Ga0080574_RS24440
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24440
old locus tag: Ga0080574_TMP4926
so part of: sequence
location: 50246..51709
location: region:50246-51709:1
so has part: feature:50246-51709:1:exon
subclass of: SO_0000010

position:50246:1
position: 50246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51709:1
position: 51709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50246-51709:1:exon

Ga0080574_RS24440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24440
old locus tag: Ga0080574_TMP4926
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009806839.1
GO process: GO:0007160 - cell-matrix adhesion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nidogen-like domain-containing protein
translation: MPITGNGTPQAGLGGPAGYGEIMVPRSDDGSLRLDLSAVFEDGLNYFGVVYDARTLHANTNGTLTFLTPMAAYPTAGNRAAGYDVIAPYWGDADTRLDGEGRESGAIWVDIDPVSDVVTLTWDDVGVYRRNADATNLFQLQLFDRGGGDFDIVFRYGQIGWTIGTGQDDAGARAGLSSSRLSGAEWLFAVDNAAGLAQLPASPGNTGVAGLWIYEMRDGSVSGIGSYDGRVARGTGAAERLAGTERNDFLTGLGGQDTLRGLAGNDSLDGGTGDDLLQGDDGQDTLYGGDGRDTLIGGAGNDSLRAGDTGNDLRDLVYGGAGNDQIDGGYGNDELRGDAGNDTILGGYGVDEIIGGDGDDQLAGQTWSDAIFGGNGNDFINGGFGHDRVNGGAGADRFYHLGIANHGSDWIQDYTAAEGDVLVFGGSATATDFQVNYAATPDAGSAGAREAFVIYRPTGQILWALVDGEAQSEINLVLAGQIHDLLA
SIO_010081: Ga0080574_RS24440
subclass of: SO_0000673
so part of: Ga0080574_RS24440
location: 50246..51709
location: region:50246-51709:1
so has part: feature:50246-51709:1:exon

WP_076706156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50246-51709:1:exon

Ga0080574_RS24445
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24445
old locus tag: Ga0080574_TMP4927
so part of: sequence
location: 51901..52503
location: region:51901-52503:1
so has part: feature:51901-52503:1:exon
subclass of: SO_0000010

position:51901:1
position: 51901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52503:1
position: 52503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51901-52503:1:exon

Ga0080574_RS24445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24445
old locus tag: Ga0080574_TMP4927
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLILLCLAGTAIQGSAMGFAQHTQTTEDLRIPGNWGSVRGFAARDDGTALDPGFLRVYRTRLPGSPAQGLPASVRRQAEAVAPLAGLPAAEDLSNQAAAAQRLGVDLRALAEMRFGSGKYTLPNALLAVQAGTALPGFFHAYIAPDQPGAPVTATLYCLAAGADGATVVSLTHLGQVPPGRMRAIKQTVCGNERRSVPTP
SIO_010081: Ga0080574_RS24445
subclass of: SO_0000673
so part of: Ga0080574_RS24445
location: 51901..52503
location: region:51901-52503:1
so has part: feature:51901-52503:1:exon

WP_156876475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51901-52503:1:exon

Ga0080574_RS26640
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS26640
old locus tag: Ga0080574_TMP4929
so part of: sequence
location: 52610..55447
location: region:52610-55447:1
so has part: feature:52610-55447:1:exon
subclass of: SO_0000010

position:52610:1
position: 52610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55447:1
position: 55447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52610-55447:1:exon

Ga0080574_RS26640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS26640
old locus tag: Ga0080574_TMP4929
inference: COORDINATES: protein motif:HMM:NF020137.2
GO component: GO:0005615 - extracellular space [Evidence IEA]
GO function: GO:0005509 - calcium ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M10 family metallopeptidase C-terminal domain-containing protein
translation: MANTTPESAISTSLPATGQTMLADITHDHVWDDASLQFYLGGPEVLTFDTEFLNYYNGTPTDYYSGSPDASFAFETQTVRAFQMIDSVIATDFSRVTTSATAQSSADLLVVSSSNSDEAGLEGFFRFPGDATRAANDYWSIGVFSSDLAVMTADPERGGGEYRNWTIIHEIGHGIGLYHPFQGDAAVSVGSAMDNERYTVMSYTGSATATTYGHAVTMMALDIAALQQQYGTESYATGNSTYTLFDAQGGDLSVAEGAMAIGRAYASIWDSGGADTIRYGNTDNSVLINLNDATLDRSGIATDAAPAITALQHTSFYGNMAADLRTETIDQNYHAGGFFSRVLTESGGTYSGIDGGYSIAYGVQIENATGGEAGDMLIGNEQGNTLAGLDGNDTMIGSGGNDTLDGGDGCDTAAYSGASSEYTITENDNGTVTIAHTGGSGVDGTDVMQNVEFAQFSDERVSLATEELDFTEVSSSAFLPYGANVLYRNDDGNSGAIDITSIFEEGLMIDGVTYTNVYVNTNGNITFGGGLSTYTPSGITGAGREIIAPYWADVDTRDPNEGSNPGNVYWDFNEDRDSIIVTWDNVGYYNRNVDLLSSFQLELIDRGCGNVEIIFRYEDISWTAGDASGGEGGLGGVTSRAGFSLGETYFELPASGNEAAMLNLENAQGNLSVSGVWQFIVSGGYVQGVGGAEDDTYTGDEGDNNYLGGQGNDTASGGDGNDSLFGGQGDDSLSGDEGEDSLDGGSGQDTVNGGPGNDSIVDGGTDDDLFDVLYGGEGDDFMDGGFGNDSMRGDAGNDTMIGGHGTDTIIGGTGDDVLTGQTWSDLIFGGDGMDFINGGFGHDRVNGGDGADRFYHLGVLGHGSDWIQDYDAAEGDLLVYGGIASIDQFQINYAETPSAGAAGVEEAFVIYRPTGQILWALVDGEAQSEINLVLHNGVTYDLMAA
SIO_010081: Ga0080574_RS26640
subclass of: SO_0000673
so part of: Ga0080574_RS26640
location: 52610..55447
location: region:52610-55447:1
so has part: feature:52610-55447:1:exon

WP_156876476.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52610-55447:1:exon

Ga0080574_RS26775
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS26775
old locus tag: Ga0080574_TMP4930
so part of: sequence
location: 55521..56723
location: region:55521-56723:1
so has part: feature:55521-56723:1:exon
subclass of: SO_0000010

position:55521:1
position: 55521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56723:1
position: 56723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55521-56723:1:exon

Ga0080574_RS26775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS26775
old locus tag: Ga0080574_TMP4930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009806839.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPIDIYAPTDNDALSAQELALYHLLMDYRAANGLPAIPLSASLTLTAGRHAVDTYQNIWLEGVTLPDGANLHSWSDAYYYADHSAAEVMWNAPSRLGTSYPSNGYEITAAGFASIEAALAGWQSSPGHDAVILNEGIWEDNDWSAIGVGIEYHTSGGPYGGRIYHVWFGTSADPAGGPEIFGTDGSDSMTGTAAGDTIRALDGADTVIGGEGDDFLFGGDSADDPRDVIYGGAGADSIDGGYGNDELRGDAGNDTITGGFGADTVIGGTGDDALTGQAWSDAIFGGDGDDFINGGFGHDRVNGGAGADRFFHLGANGHGSDWIQDYSAAEGDRLVYGGGAAVADDFLVQRATTPGAGAAGVQEIFITHIPSGDLLWALVDGDAQASITVTAGGTSFDLLG
SIO_010081: Ga0080574_RS26775
subclass of: SO_0000673
so part of: Ga0080574_RS26775
location: 55521..56723
location: region:55521-56723:1
so has part: feature:55521-56723:1:exon

WP_076706158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55521-56723:1:exon

Ga0080574_RS24460
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24460
old locus tag: Ga0080574_TMP4931
so part of: sequence
location: 56818..58851
location: region:56818-58851:1
so has part: feature:56818-58851:1:exon
subclass of: SO_0000010

position:56818:1
position: 56818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58851:1
position: 58851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56818-58851:1:exon

Ga0080574_RS24460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24460
old locus tag: Ga0080574_TMP4931
inference: COORDINATES: protein motif:HMM:NF012573.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium-binding protein
translation: MALAHSPVADNSLLPFAQPGAVQVPPISASSSHAWSSWFDLGNIFEDGLTLGNQTYRGLRVFTSGEIQLGNSDGWQDTSINAYYSTSTDIRAIPDGVVNQGVWIEENTARDSVLITFNAVGQYSNDVWNTITYQVEIIDRGENDTEVIYRFNALDFPTYPSGVASYIRYDDWNYSLPVRLMPVGAQWEDLEGNTGIDGVWQLRIEDGIFDMSDVATPHEAHIGTAAPEELNGWLGGDILRGLEGDDTLDGSGGNDTITGDTGDDLIFGDIGADLINGGDGNDDIRAGPDRDSIGAGDGDDTVDGDGGHDNIYGGEGANRLIGGTGNDYITAGSDDDAIQGNNGQDTINSGAGNDTVDAGNDADTVHGGAGDDILLGGGGADYLTGGDGNDTINTGGAHVHIDRNTVLAGAGDDLVNVALGRNTVEGGEGHDEIIVHHMVGLLDAHINSNQLNGGLGDDTITGGRFHDTIGGQEGNDLLDGGNGNDSIGAGDGDDTVTGDAWDGTGHDWIYGGAGADSLYGGGGNDTIFGGEGDDTLLGSYGRDLLLGGDGDDFIFGGAGSDVAAGGAGADRFFASFRGNDVTTINDYNPDEGDVLVLDGRYFSADDLRLRGDRMTDAEGNPTGYSSMTLVRVNEDGSLGQTIFDFANASELDRIVIRMPNEPIDGIAQVEIITFDLL
SIO_010081: Ga0080574_RS24460
subclass of: SO_0000673
so part of: Ga0080574_RS24460
location: 56818..58851
location: region:56818-58851:1
so has part: feature:56818-58851:1:exon

WP_076706159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56818-58851:1:exon

Ga0080574_RS24465
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24465
old locus tag: Ga0080574_TMP4932
so part of: sequence
location: complement(58867..59937)
location: region:58867-59937:-1
so has part: feature:58867-59937:-1:exon
subclass of: SO_0000010

position:58867:-1
position: 58867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59937:-1
position: 59937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58867-59937:-1:exon

Ga0080574_RS24465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24465
old locus tag: Ga0080574_TMP4932
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYPETEDGPEGPYDSAPAAEEDLWFLPAPPDPDAAGLAPLPRADRRALLPLEEWRAAQAAQAAELARAALAFGALEQAAAEDAGLIRRLALTEASEISWQAGLRAPPERLALYGAGRLLGLGDAARDMARAHWARRRLEGGADPVTDPAGFLGRRGRTGDRRPTGWEGAPHGGEFAALAEEWQARIAAAEALHPFVRAALAEALWRALELSAGEAAGVEARVASARIAAVAGRGRLGFVPVAMGGRSVSGGGAEARLAGWLHAAEQGALRGLLIARRLSDWQARAAEALSGLSGRTPPALITVLRRHPLVPAALAVSETGASAAAVQRNLALLEARGLIRERSGQSRFRFWEAAL
SIO_010081: Ga0080574_RS24465
subclass of: SO_0000673
so part of: Ga0080574_RS24465
location: complement(58867..59937)
location: region:58867-59937:-1
so has part: feature:58867-59937:-1:exon

WP_076706160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58867-59937:-1:exon

Ga0080574_RS24470
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24470
old locus tag: Ga0080574_TMP4933
so part of: sequence
location: 60084..61148
location: region:60084-61148:1
so has part: feature:60084-61148:1:exon
subclass of: SO_0000010

position:60084:1
position: 60084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61148:1
position: 61148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60084-61148:1:exon

Ga0080574_RS24470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24470
old locus tag: Ga0080574_TMP4933
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010443760.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MTALTAPFTASLPRLSEQETAALNDLYRRGTPENTLRAYERDLVYIAAWKRTRLDAGLTWPEDETTALLFLLDHSRDLGPADIADPARGTAETLIAAGLRRSLACPAPASLDRRIASWRSFHRMKGLASPFDSPALRQARAKARRANARPRAPKSANPITREVLTALLDTCGPGLRGIRDRALLTLGWASGGRRRSELARLRREDVDLSEFDSQTRLWIQLVQTKTTDAGGTPKLILQGMTARALVAWIDAAEISDGPLFRPISRAGRALPRGLSAEALRHILRQRLVQAGLPADFASAHGLRSGFLTQAALDGVPVQAAMRLSLHRSLAQAARYYDDIDPAQNPAARLLEPPE
SIO_010081: Ga0080574_RS24470
subclass of: SO_0000673
so part of: Ga0080574_RS24470
location: 60084..61148
location: region:60084-61148:1
so has part: feature:60084-61148:1:exon

WP_076706161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60084-61148:1:exon

Ga0080574_RS24475
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS24475
old locus tag: Ga0080574_TMP4934
so part of: sequence
location: complement(61185..62099)
location: region:61185-62099:-1
so has part: feature:61185-62099:-1:exon
subclass of: SO_0000010

position:61185:-1
position: 61185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62099:-1
position: 62099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61185-62099:-1:exon

Ga0080574_RS24475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS24475
old locus tag: Ga0080574_TMP4934
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012642355.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFWANAELLAEHGLIYPQLGRHTGHHGLVLDWQGMPGHYKLEQGSLEALAETYGQSDKTVFLSSEEFSRRQPLASLGKVRAALEGFDEIEVICTLRTQWQFLQSIYLEVSKTRVPPRPPQLVLPVIENGSFEGLWVDYNRLLDALEAVFAPEEITFFDFDTSRRAEGGIIGTLLRHLGIGVDAARLEVVNDGASNVSPMSLASWTANILAEPKPAPAWLVQNASEALKAEFGDEVKPCLFTREEFRRLKDHYDTRNAELSERRAGVQPEFAISEASQKGLTLFRNEIPSAYWVRMSRRLVADRL
SIO_010081: Ga0080574_RS24475
subclass of: SO_0000673
so part of: Ga0080574_RS24475
location: complement(61185..62099)
location: region:61185-62099:-1
so has part: feature:61185-62099:-1:exon

WP_237219427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61185-62099:-1:exon

Ga0080574_RS26705
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS26705
old locus tag: Ga0080574_TMP4935
so part of: sequence
location: complement(62152..62523)
location: region:62152-62523:-1
so has part: feature:62152-62523:-1:exon
subclass of: SO_0000010

position:62152:-1
position: 62152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62523:-1
position: 62523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62152-62523:-1:exon

Ga0080574_RS26705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS26705
old locus tag: Ga0080574_TMP4935
inference: COORDINATES: protein motif:HMM:NF025665.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 99-like domain-containing protein
translation: MIANSVSESYARTLPENTICGIMPSWDNTARRGLSAHMAYGANPGRFRYWLNQIARKRLEGSYRQELFVNAWNEWAEKAMLEPTQSYGDLYLQVLGSQIAAPAEAGGAEELQPQKEKRLSASV
SIO_010081: Ga0080574_RS26705
subclass of: SO_0000673
so part of: Ga0080574_RS26705
location: complement(62152..62523)
location: region:62152-62523:-1
so has part: feature:62152-62523:-1:exon

WP_076706163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62152-62523:-1:exon

Ga0080574_RS26660
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS26660
pseudo: true
so part of: sequence
location: complement(62520..63392)
location: region:62520-63392:-1
so has part: feature:62520-63392:-1:exon
subclass of: SO_0000010

position:62520:-1
position: 62520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63392:-1
position: 63392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62520-63392:-1:exon

Ga0080574_RS26660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS26660
inference: COORDINATES: protein motif:HMM:NF025665.2
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycoside hydrolase family 99-like domain-containing protein
SIO_010081: Ga0080574_RS26660
subclass of: SO_0000673
so part of: Ga0080574_RS26660
location: complement(62520..63392)
location: region:62520-63392:-1
so has part: feature:62520-63392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62520-63392:-1:exon

Ga0080574_RS26665
type: Gene
subclass of: SO_0000704
RO_0002162: 1250539
locus tag: Ga0080574_RS26665
pseudo: true
so part of: sequence
location: complement(<63694..63921)
location: region:63694-63921:-1
so has part: feature:63694-63921:-1:exon
subclass of: SO_0000010

position:63694:-1
position: 63694
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:63921:-1
position: 63921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63694-63921:-1:exon

Ga0080574_RS26665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1250539
locus tag: Ga0080574_RS26665
inference: COORDINATES: protein motif:HMM:NF016903.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: rhamnan synthesis F family protein
SIO_010081: Ga0080574_RS26665
subclass of: SO_0000673
so part of: Ga0080574_RS26665
location: complement(<63694..63921)
location: region:63694-63921:-1
so has part: feature:63694-63921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63694-63921:-1:exon