Oenococcus oeni strain AWRIB429 plasmid unnamed, complete sequence.
type: Entry
definition: Oenococcus oeni strain AWRIB429 plasmid unnamed, complete sequence.
sequence version: NZ_CP084702.1
sequence date: 2023-03-20
sequence: sequence
division: CON
label: NZ_CP084702.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN21464313
keyword: RefSeq
source: Oenococcus oeni
organism: Oenococcus oeni
taxonomy: Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Oenococcus.
reference: 1
references: 34612664
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP084702.1.\nBacteria and source DNA available from Australian Wine Research\nCulture Collection strain AWRIB429.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2020\nAssembly Method :: Unicycler v. 0.4.8\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 200.0x\nSequencing Technology :: Oxford Nanopore MinION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/20/2023 06:03:50\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,970\nCDSs (total) :: 1,916\nGenes (coding) :: 1,851\nCDSs (with protein) :: 1,851\nGenes (RNA) :: 54\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 3\nPseudo Genes (total) :: 65\nCDSs (without protein) :: 65\nPseudo Genes (ambiguous residues) :: 0 of 65\nPseudo Genes (frameshifted) :: 35 of 65\nPseudo Genes (incomplete) :: 15 of 65\nPseudo Genes (internal stop) :: 19 of 65\nPseudo Genes (multiple problems) :: 4 of 65\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 21906
topology: circular
so has quality: SO_0000988
location: 1..21906
location: region:1-21906:1
RO_0002162: 1247

NZ_CP084702
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN21464313
type: BioSample
SIO_000068: biosample

1
title: Analysis of Transcriptomic Response to SO2 by Oenococcus oeni Growing in Continuous Culture
author: Onetto, C.A.
author: Costello, P.J.
author: Kolouchova, R.
author: Jordans, C.
author: McCarthy, J.
author: Schmidt, S.A.
journal: Microbiol Spectr 9 (2), e0115421 (2021)
pubmed: 34612664

34612664
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Onetto, C.A.
journal: Submitted (07-OCT-2021) Research, The Australian Wine Research Institute, Corner of Hartley Grove and Paratoo Road, Adelaide 5064, Australia

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21906:1
position: 21906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21906:1:source
so part of: sequence
organism: Oenococcus oeni
mol type: genomic DNA
strain: AWRIB429
isolation source: Wine
plasmid: unnamed
country: Australia: Adelaide
collection date: 2020

1247
type: Taxonomy
SIO_000068: taxonomy

J3U91_RS09685
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09685
old locus tag: J3U91_01995
so part of: sequence
location: 1..1116
location: region:1-1116:1
so has part: feature:1-1116:1:exon
subclass of: SO_0000010

75066784
type: Gene
SIO_000068: ncbigene

position:1116:1
position: 1116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1116:1:exon

J3U91_RS09685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09685
old locus tag: J3U91_01995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002823702.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MAQDSFKFYKADSVYGNLFFQFPKVLMYGSQYSKLSSDTKLAYMVLKDRLEYSLKNHLVDEENHVYFIFTNEELKSLFNCSNTKVAKIKKELEAAHLLLQKRMGFQPSAGRQLPNRLYLADLSVNPQDRYLRSQETSETAQTLDKSRLPKIRSQYETAQSLDNKRLPKIRSQYEFATNESQTLDKSRLPKIGHNLYKDSKNIDTNRYNIDTQKLDFSTAHFSPAEIQKQNQDLVNHANDFLTDEDSGLPVFLEPEAVQLLSFWCRTPQQMRRFIGIILNAKYRVEKDHKDIGVIIPLDDEELKPLMTKALRRYFNVLRSNEKHIKNVENYLYGTMQNLFGVWWNKQAAREYAAKHPEEEKPADNDNSGLYY
SIO_010081: J3U91_RS09685
subclass of: SO_0000673
so part of: J3U91_RS09685
location: 1..1116
location: region:1-1116:1
so has part: feature:1-1116:1:exon

WP_002823702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1116:1:exon

J3U91_RS09690
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09690
old locus tag: J3U91_01996
so part of: sequence
location: 1378..1659
location: region:1378-1659:1
so has part: feature:1378-1659:1:exon
subclass of: SO_0000010

75066785
type: Gene
SIO_000068: ncbigene

position:1378:1
position: 1378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659:1
position: 1659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378-1659:1:exon

J3U91_RS09690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09690
old locus tag: J3U91_01996
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005693113.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAVKEKKRVQVKIDKDLADDTEAVLSELGLNPTTAINMFYKRIVANGALPFNASLSEEERANLRFLKATEGTPVTEFKDAKEVADWLNDPDED
SIO_010081: J3U91_RS09690
subclass of: SO_0000673
so part of: J3U91_RS09690
location: 1378..1659
location: region:1378-1659:1
so has part: feature:1378-1659:1:exon

WP_002819873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1378-1659:1:exon

J3U91_RS09695
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09695
old locus tag: J3U91_01997
so part of: sequence
location: 1649..2155
location: region:1649-2155:1
so has part: feature:1649-2155:1:exon
subclass of: SO_0000010

75066786
type: Gene
SIO_000068: ncbigene

position:1649:1
position: 1649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2155:1
position: 2155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1649-2155:1:exon

J3U91_RS09695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09695
old locus tag: J3U91_01997
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002823700.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTNDLVSLYVSFVETNGGKSRPVLIRRVSEQTVEAFKITSQYEKKSAYIKQQYYPIQDWQSAGLKKPSWVDLGNIYRFPKAGLNFKEIGHLSKLDQNKISDFTLDLKSKIRGKGQKIIQQRSSKRKHKESKAELTQRIQKQLKDFAKHNPEIKPKNNPENKNDRPSY
SIO_010081: J3U91_RS09695
subclass of: SO_0000673
so part of: J3U91_RS09695
location: 1649..2155
location: region:1649-2155:1
so has part: feature:1649-2155:1:exon

WP_002819871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1649-2155:1:exon

J3U91_RS09700
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09700
old locus tag: J3U91_01998
so part of: sequence
location: complement(2145..2423)
location: region:2145-2423:-1
so has part: feature:2145-2423:-1:exon
subclass of: SO_0000010

75066787
type: Gene
SIO_000068: ncbigene

position:2145:-1
position: 2145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2423:-1
position: 2423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2145-2423:-1:exon

J3U91_RS09700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09700
old locus tag: J3U91_01998
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003603789.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNQYEKLAEQQARLKQKIDREDFKLRQSKYYENRQARKARSRRLIQKGALLEKYFQANNLSVEQTEELLKTFADYVNAHKPDKLKNDQPNN
SIO_010081: J3U91_RS09700
subclass of: SO_0000673
so part of: J3U91_RS09700
location: complement(2145..2423)
location: region:2145-2423:-1
so has part: feature:2145-2423:-1:exon

WP_002819870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2145-2423:-1:exon

J3U91_RS09705
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09705
old locus tag: J3U91_01999
so part of: sequence
location: complement(2446..2673)
location: region:2446-2673:-1
so has part: feature:2446-2673:-1:exon
subclass of: SO_0000010

75066788
type: Gene
SIO_000068: ncbigene

position:2446:-1
position: 2446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673:-1
position: 2673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2446-2673:-1:exon

J3U91_RS09705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09705
old locus tag: J3U91_01999
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012552807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIGGIVMSQSNLEKQEAKLKALNQKIKDEKNKIEQRLGKQIISQANLDYANLSNDQIKLLAKQFSEFLKVKSVDH
SIO_010081: J3U91_RS09705
subclass of: SO_0000673
so part of: J3U91_RS09705
location: complement(2446..2673)
location: region:2446-2673:-1
so has part: feature:2446-2673:-1:exon

WP_003555660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2446-2673:-1:exon

J3U91_RS09710
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
gene: mobQ
locus tag: J3U91_RS09710
old locus tag: J3U91_02000
so part of: sequence
location: 2927..4990
location: region:2927-4990:1
so has part: feature:2927-4990:1:exon
subclass of: SO_0000010

75066789
type: Gene
SIO_000068: ncbigene

position:2927:1
position: 2927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4990:1
position: 4990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2927-4990:1:exon

J3U91_RS09710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
gene: mobQ
locus tag: J3U91_RS09710
old locus tag: J3U91_02000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016511122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIFHMSFSNISAGKGRSAIAGASYRSGEKLFDQKEGRSYFYARSVMPESFILTPKNAPEWANDREKLWNEVERKDRRANSRYAKEFNVALPVELSEDEQKELLTKYVQEDFVDEGMVADVAIHRDHPDNPHAHVMLTNRPFNPDGTWGLKSKRENILDENGNKTYTGNSRFPRSRKVWLVDWDKKEKINQWRHNWAVSVNQVLEQKNIPDRISEKSFVEQGIADTPMQHEGINSKRHERKAFNQQVKNYRKAKASYKNNQEKVINRGHLDSLSEHLSFNEKRVVKELSHELKTYISLENLDDKRRMLFNWKNSTLIKHAVGEDVTKQLLTINQQESSLKKADELLNKVVDRTTKKLYPELNFEQTTQAERRELIKETDSEQTVFKGSELNERLMNIRDDLLTQQLLTFTKRPYVGFKLLMQQEKEVKIELKYTLMIHDDSLESLEHVDQGLLEKYSPTEQQKITRAVKDLRTIMAVKQVIQTQYQEVLRRAFPNGNFNELPMIKQEQAYTAVMYYDPVLKPCQAETIEQWQANPPQVFSPPEHQQGLAYLSGQLSLDQLENHHLQRVLKHDGTKQLFFGECKADPTIKNSQIEKIQMQLKEQQAKDDQYRKANMGHYQPLNYKPVSPDYYLKTAFSDAIMTVLYARDEDYQRQKQERGLKETEWEMTKKQRQHQTRNRHEDGGMHL
SIO_010081: J3U91_RS09710
subclass of: SO_0000673
so part of: J3U91_RS09710
location: 2927..4990
location: region:2927-4990:1
so has part: feature:2927-4990:1:exon

WP_002819868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2927-4990:1:exon

J3U91_RS09715
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09715
old locus tag: J3U91_02001
so part of: sequence
location: 5110..6621
location: region:5110-6621:1
so has part: feature:5110-6621:1:exon
subclass of: SO_0000010

75066790
type: Gene
SIO_000068: ncbigene

position:5110:1
position: 5110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6621:1
position: 6621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5110-6621:1:exon

J3U91_RS09715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09715
old locus tag: J3U91_02001
EC number: 5.6.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014940859.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase
translation: MVYQRDQAIKNFKPEPYFELNAEILANQQKFVAKLDPYQRFKDEAGLMTFMRAKHVHKGSQDGLIKDVQKQGKKRASPQLFSLSSLQSAMNKRYHASASQTLAAIQSLYEAKLLSYPRTDCAYITDEEFDYLVANLTKYLGLVSKPVALTNTTPNKRYVNGKKVEEHYAIIMTKVVPPKEKLASLPKLQQQVYDLVLRTTLAMFADPYEYEETTIITQVGDANFKATGKVPTKQGWQVLFDETKTEQQEVATLPLVHQGDQVQANLQTPQKETTPPVSFTEGTLITAMKTAGKTLDDEAAQAILKDVQGIGTSATRANVLEVLKKRGYLVTEKNKLHVSEAGITLCKAVELEPLLTSPEMTAKWEQALQQISTEERTPDNFLSQIKKFVAKLIADVPTQLTGSAAIKQQINHQQQAQKSDEVFLETPQATVLNKQKFYIVKPKQGESFTLPKKWSSKTLGKTAIKALVTNGETSKLKGFKSKKGKSFDAKLKLDGHKLSFDFD
SIO_010081: J3U91_RS09715
subclass of: SO_0000673
so part of: J3U91_RS09715
location: 5110..6621
location: region:5110-6621:1
so has part: feature:5110-6621:1:exon

WP_002819867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5110-6621:1:exon

J3U91_RS09720
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09720
old locus tag: J3U91_02002
so part of: sequence
location: 6744..6959
location: region:6744-6959:1
so has part: feature:6744-6959:1:exon
subclass of: SO_0000010

75066791
type: Gene
SIO_000068: ncbigene

position:6744:1
position: 6744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6959:1
position: 6959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6744-6959:1:exon

J3U91_RS09720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09720
old locus tag: J3U91_02002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015474742.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDNKLAVLASELPVLQAKGTYKYLKEITGNGAYYQVAWQKLSDGYVALYGTTPIQIRSLPTLNDIFEDEEG
SIO_010081: J3U91_RS09720
subclass of: SO_0000673
so part of: J3U91_RS09720
location: 6744..6959
location: region:6744-6959:1
so has part: feature:6744-6959:1:exon

WP_002819866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6744-6959:1:exon

J3U91_RS09725
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09725
old locus tag: J3U91_02003
so part of: sequence
location: 6963..8087
location: region:6963-8087:1
so has part: feature:6963-8087:1:exon
subclass of: SO_0000010

75066792
type: Gene
SIO_000068: ncbigene

position:6963:1
position: 6963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8087:1
position: 8087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6963-8087:1:exon

J3U91_RS09725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09725
old locus tag: J3U91_02003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002346505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPNKADVKAWKAQLVAQAEQQILKLTDSDQFKKYLNTLAKFHHYSARNIDLIYAQNPQATQVAGFKQWQKAFNRTVNRGAKAIRIAAPIIKKLTPAEQKHLDTTDERAIVGYRYLPVFDVAQTSGEPVLSAKDFVKENLADHQNVTSLYNAFKDYLNQQTDLKVSEVPLATLNGAKGYFQPSTNEIVIGGDEPDNALKLKTLYHEYAHSQLHGLKSAFKDRPRAYQETQAEAVAYVAMQNIGVDTSNYSLGYVATWAKDKAVIHSALSEIQQVSNKVIELSDGLTKQLGLQEVPKEPEHDLKKLSAHDLNESYQGLQQQVQQATNPQQKSELQNKLNDVHHEISNRTQKQLKAFSEQNPAIKQPEHNSAKTLKR
SIO_010081: J3U91_RS09725
subclass of: SO_0000673
so part of: J3U91_RS09725
location: 6963..8087
location: region:6963-8087:1
so has part: feature:6963-8087:1:exon

WP_002819865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6963-8087:1:exon

J3U91_RS09730
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09730
old locus tag: J3U91_02004
so part of: sequence
location: 8102..9061
location: region:8102-9061:1
so has part: feature:8102-9061:1:exon
subclass of: SO_0000010

75066793
type: Gene
SIO_000068: ncbigene

position:8102:1
position: 8102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9061:1
position: 9061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8102-9061:1:exon

J3U91_RS09730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09730
old locus tag: J3U91_02004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002819864.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-2-hydroxyacid dehydrogenase
translation: MKIVLLDGYELNKDLNWKSLQELGDCTLYDRTPVNDNAEIIKRIKYADIVITHKTPLDHEVISKTSRLKYIGIMGTGYDVVDIESAHQNKVVVTNIPTYASDAVAQFTFSLLLEVTSQVGLHNQLVHENRWAQAPDFTFWEKPLLELKGKTLGLIGYGHIAQKVAKIGHAFFMKVIFYNHRPKKVPESWIQQVSFDELLRQSDVLSLHVIQTPETIDLINNDTIAKMKTGVIILNTARGKLANEADIKNALNEGKIYAYATDVVKGEPIASDSPLLQAKNCYITPHIAWAPYETRERLLHMTVDNIKAYLSGDLKNVIN
SIO_010081: J3U91_RS09730
subclass of: SO_0000673
so part of: J3U91_RS09730
location: 8102..9061
location: region:8102-9061:1
so has part: feature:8102-9061:1:exon

WP_002819864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8102-9061:1:exon

J3U91_RS09735
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09735
old locus tag: J3U91_02005
so part of: sequence
location: complement(9179..9565)
location: region:9179-9565:-1
so has part: feature:9179-9565:-1:exon
subclass of: SO_0000010

75066794
type: Gene
SIO_000068: ncbigene

position:9179:-1
position: 9179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9565:-1
position: 9565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9179-9565:-1:exon

J3U91_RS09735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09735
old locus tag: J3U91_02005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003690678.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNQEFDLATVKHFFEHDYHDRGMMKWQGFYLSDHTAALNQQNQQLNAVYVPRPQQSLATITEVLADAYQRQQPVIIQLKTVDQNNRHWPDITTLIHGYNANDIVVDADRFIPLQEIRNVSFKNTEKL
SIO_010081: J3U91_RS09735
subclass of: SO_0000673
so part of: J3U91_RS09735
location: complement(9179..9565)
location: region:9179-9565:-1
so has part: feature:9179-9565:-1:exon

WP_002819863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9179-9565:-1:exon

J3U91_RS09740
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09740
old locus tag: J3U91_02006
so part of: sequence
location: complement(9558..9878)
location: region:9558-9878:-1
so has part: feature:9558-9878:-1:exon
subclass of: SO_0000010

75066795
type: Gene
SIO_000068: ncbigene

position:9558:-1
position: 9558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9878:-1
position: 9878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9558-9878:-1:exon

J3U91_RS09740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09740
old locus tag: J3U91_02006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003645617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNSDIEIIKGRLTLLFKRRPQTRYWLMLTNDTYDQTYNLFFNSQRANERLQSVPLHKLAHYDLAGLEKLLKALRQDIKLTIEFVGFTGERWPANQKLIQRKRVPLE
SIO_010081: J3U91_RS09740
subclass of: SO_0000673
so part of: J3U91_RS09740
location: complement(9558..9878)
location: region:9558-9878:-1
so has part: feature:9558-9878:-1:exon

WP_002819862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9558-9878:-1:exon

J3U91_RS09745
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09745
pseudo: true
so part of: sequence
location: complement(9871..>10197)
location: region:9871-10197:-1
so has part: feature:9871-10197:-1:exon
subclass of: SO_0000010

75066796
type: Gene
SIO_000068: ncbigene

position:9871:-1
position: 9871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10197:-1
position: 10197
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9871-10197:-1:exon

J3U91_RS09745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014386908.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: excinuclease ABC subunit A
SIO_010081: J3U91_RS09745
subclass of: SO_0000673
so part of: J3U91_RS09745
location: complement(9871..>10197)
location: region:9871-10197:-1
so has part: feature:9871-10197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9871-10197:-1:exon

J3U91_RS09750
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09750
old locus tag: J3U91_02007
so part of: sequence
location: complement(10288..10902)
location: region:10288-10902:-1
so has part: feature:10288-10902:-1:exon
subclass of: SO_0000010

75066797
type: Gene
SIO_000068: ncbigene

position:10288:-1
position: 10288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10902:-1
position: 10902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10288-10902:-1:exon

J3U91_RS09750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09750
old locus tag: J3U91_02007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002819861.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MQAKNIEVIHMSRQILLKDRIIQAAVAIIEAGGTPTFSTISRRLGSRSQALYPYFANQTELSFAIFDWVARQLNDQIKTELFGLSGREGLIALAVAMRREGLAHVRLTQYLLSIPRDTANADMQQGTDLFRDLLGGMIRPVFQHSRVRLIAVRWLRDLIVGDVVNIGAGWFIDQGISADDSFELALTASLDRLTLEDQQDTQDD
SIO_010081: J3U91_RS09750
subclass of: SO_0000673
so part of: J3U91_RS09750
location: complement(10288..10902)
location: region:10288-10902:-1
so has part: feature:10288-10902:-1:exon

WP_226490012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10288-10902:-1:exon

J3U91_RS09755
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09755
old locus tag: J3U91_02008
so part of: sequence
location: 11048..11794
location: region:11048-11794:1
so has part: feature:11048-11794:1:exon
subclass of: SO_0000010

75066798
type: Gene
SIO_000068: ncbigene

position:11048:1
position: 11048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11794:1
position: 11794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11048-11794:1:exon

J3U91_RS09755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09755
old locus tag: J3U91_02008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002824582.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfite exporter TauE/SafE family protein
translation: MEIVSLLLIGLIIGFVVISMGGGGAAIYLGVLTAVFHLAPAAATATSLVTALPSLILGSLGYYRQRAINFKLGNQMLIAALPAVVVGSLLSPYIPESIYTWVVGIILVLLGLNIMRNKQTGSTQLQAHGRLKASSFGILSGLMVGVAGISGGGPILAGLLILGLNMVNAVATSSYVLVGMTIVGTIFHTAGGQVDWHAGLGLMIGALIGAAIAPYVMSRFVGGSKNAGGKLKPIMGILLILTGIKTIW
SIO_010081: J3U91_RS09755
subclass of: SO_0000673
so part of: J3U91_RS09755
location: 11048..11794
location: region:11048-11794:1
so has part: feature:11048-11794:1:exon

WP_002819859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11048-11794:1:exon

J3U91_RS09760
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09760
so part of: sequence
location: complement(11844..12047)
location: region:11844-12047:-1
so has part: feature:11844-12047:-1:exon
subclass of: SO_0000010

75066799
type: Gene
SIO_000068: ncbigene

position:11844:-1
position: 11844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12047:-1
position: 12047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11844-12047:-1:exon

J3U91_RS09760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003691581.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MDCLISGFCSANADIIRLFISNRVNSIAHDGDNTILNLGPLENDKKFDVIADVSNDDVVLNKEPNGQ
SIO_010081: J3U91_RS09760
subclass of: SO_0000673
so part of: J3U91_RS09760
location: complement(11844..12047)
location: region:11844-12047:-1
so has part: feature:11844-12047:-1:exon

WP_226490011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11844-12047:-1:exon

J3U91_RS09765
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09765
old locus tag: J3U91_02009
so part of: sequence
location: 12372..12959
location: region:12372-12959:1
so has part: feature:12372-12959:1:exon
subclass of: SO_0000010

75066800
type: Gene
SIO_000068: ncbigene

position:12372:1
position: 12372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12959:1
position: 12959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12372-12959:1:exon

J3U91_RS09765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09765
old locus tag: J3U91_02009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003680034.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSSKEQHLDRQLAALKGVDKLFTDKLSGANTNRPELQKLLAYIREGDIVMVTELDRLGRNNQDLTQIMNSIQNKGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIERQQQGIALAKQQGKYHGRKPQYAKDDPRLQHAFKLYRAGMSDIDVSRNTGIKRTTFIRYRVKYGIKRK
SIO_010081: J3U91_RS09765
subclass of: SO_0000673
so part of: J3U91_RS09765
location: 12372..12959
location: region:12372-12959:1
so has part: feature:12372-12959:1:exon

WP_002824583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12372-12959:1:exon

J3U91_RS09770
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09770
old locus tag: J3U91_02010
so part of: sequence
location: complement(13199..14131)
location: region:13199-14131:-1
so has part: feature:13199-14131:-1:exon
subclass of: SO_0000010

75066801
type: Gene
SIO_000068: ncbigene

position:13199:-1
position: 13199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14131:-1
position: 14131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13199-14131:-1:exon

J3U91_RS09770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09770
old locus tag: J3U91_02010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002816610.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MATNYSRILSILEAIQSFGNITHAAKHLFITQPALSRTLKNEEEKLNVTLVDRTTKPIQLTYAGAEYLRGLQNIDTATKQLVDKMNDISQSKSGQLSIGLPETLGTLFLPQLIQLYTTKYPQYHLQIREMASTQAAKTVIDNQLDLYIGPKPIKGSHFIYRQIKPIHFNLIYPESLSVEKLSKIERLTQFQFLKAQNYIGIDQTMITGLLLNQFFVNSNLHIRPWIQLKNFQTILQLVNKGLGFTILPSYYQSIGNHVSAIQISPNLLSSDLIIAHCASKVNTPEMFAFLNIMKPLFGIKADEQLVLRND
SIO_010081: J3U91_RS09770
subclass of: SO_0000673
so part of: J3U91_RS09770
location: complement(13199..14131)
location: region:13199-14131:-1
so has part: feature:13199-14131:-1:exon

WP_002816610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13199-14131:-1:exon

J3U91_RS09775
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09775
old locus tag: J3U91_02011
so part of: sequence
location: 14274..15455
location: region:14274-15455:1
so has part: feature:14274-15455:1:exon
subclass of: SO_0000010

75066802
type: Gene
SIO_000068: ncbigene

position:14274:1
position: 14274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15455:1
position: 15455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14274-15455:1:exon

J3U91_RS09775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09775
old locus tag: J3U91_02011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002819953.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-dependent flavin oxidoreductase
translation: MTTAYKFLEPYTFKNGMTVKNRVVIPPMTEASSFEEGSITTDELRYFRIHSGGVGMFISPVANVSESGKGFEGQLSITDDRFLPGLTKMASAMKQGGAKAILQIFHAGRMSNSKVLRGTQAVSASAVAAERPNAETPRELTNPEIEQIIDDFGEATRRAIQAGFDGIELHGANTYLLQQFFSPHSNRRTDKWGGNVQKRMTFALEVIKRVHSVVTQYAKEPFIVGYRISPEEIETPGIRLADTMQFIDVLADQPIDYLHISMGYVWRTSLNDETDTEPIILKIKRQIHNRLPLISVGSVEQPADAEKVLDAGIDFVAIGRELLREPNWIQKVESNDEESIRYTISIQDLDELGITPAMWNFLTVRLKSAMHISNQPDYDKGQFDHRLAPHEGA
SIO_010081: J3U91_RS09775
subclass of: SO_0000673
so part of: J3U91_RS09775
location: 14274..15455
location: region:14274-15455:1
so has part: feature:14274-15455:1:exon

WP_002819953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14274-15455:1:exon

J3U91_RS09780
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09780
old locus tag: J3U91_02012
so part of: sequence
location: complement(15582..16265)
location: region:15582-16265:-1
so has part: feature:15582-16265:-1:exon
subclass of: SO_0000010

75066803
type: Gene
SIO_000068: ncbigene

position:15582:-1
position: 15582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16265:-1
position: 16265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15582-16265:-1:exon

J3U91_RS09780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09780
old locus tag: J3U91_02012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003660036.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRWAYLYRAIDSNGLTMDFELRKHRDYTASYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELEALLAA
SIO_010081: J3U91_RS09780
subclass of: SO_0000673
so part of: J3U91_RS09780
location: complement(15582..16265)
location: region:15582-16265:-1
so has part: feature:15582-16265:-1:exon

WP_002816607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15582-16265:-1:exon

J3U91_RS09785
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09785
old locus tag: J3U91_02013
pseudo: true
so part of: sequence
location: complement(<16338..16613)
location: region:16338-16613:-1
so has part: feature:16338-16613:-1:exon
subclass of: SO_0000010

75066804
type: Gene
SIO_000068: ncbigene

position:16338:-1
position: 16338
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:16613:-1
position: 16613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16338-16613:-1:exon

J3U91_RS09785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09785
old locus tag: J3U91_02013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016384005.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: J3U91_RS09785
subclass of: SO_0000673
so part of: J3U91_RS09785
location: complement(<16338..16613)
location: region:16338-16613:-1
so has part: feature:16338-16613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16338-16613:-1:exon

J3U91_RS09790
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09790
old locus tag: J3U91_02014
so part of: sequence
location: complement(16780..17223)
location: region:16780-17223:-1
so has part: feature:16780-17223:-1:exon
subclass of: SO_0000010

75066805
type: Gene
SIO_000068: ncbigene

position:16780:-1
position: 16780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17223:-1
position: 17223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16780-17223:-1:exon

J3U91_RS09790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09790
old locus tag: J3U91_02014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016368519.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AP2 domain-containing protein
translation: MQKRIDLANQTFGRLTVISFFGSSSNGNALWLCQCQCGNKCIVDSQRLQKGFTRSCGCLRSEISRLNIKANNQTKKYMGNPKNFQLINRTNLVASTLKRSNNKSGVIGVSWDKTAQKWVARLYFQGHLVLNRVYVHMEDAIAARKAA
SIO_010081: J3U91_RS09790
subclass of: SO_0000673
so part of: J3U91_RS09790
location: complement(16780..17223)
location: region:16780-17223:-1
so has part: feature:16780-17223:-1:exon

WP_015084348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16780-17223:-1:exon

J3U91_RS09795
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09795
old locus tag: J3U91_02015
so part of: sequence
location: complement(17255..17539)
location: region:17255-17539:-1
so has part: feature:17255-17539:-1:exon
subclass of: SO_0000010

75066806
type: Gene
SIO_000068: ncbigene

position:17255:-1
position: 17255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17539:-1
position: 17539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17255-17539:-1:exon

J3U91_RS09795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09795
old locus tag: J3U91_02015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020751798.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BRCT domain-containing protein
translation: MIDLRGKRILFTGRLRSFRRFQAQQLATILGAKPVNGIDKNVDILVVGIISKPYDQLLTTQKLTYARTYGIPKIDELAFISWCQWRLDQLKATL
SIO_010081: J3U91_RS09795
subclass of: SO_0000673
so part of: J3U91_RS09795
location: complement(17255..17539)
location: region:17255-17539:-1
so has part: feature:17255-17539:-1:exon

WP_002819966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17255-17539:-1:exon

J3U91_RS09800
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09800
old locus tag: J3U91_02016
so part of: sequence
location: complement(17545..18195)
location: region:17545-18195:-1
so has part: feature:17545-18195:-1:exon
subclass of: SO_0000010

75066807
type: Gene
SIO_000068: ncbigene

position:17545:-1
position: 17545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18195:-1
position: 18195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17545-18195:-1:exon

J3U91_RS09800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09800
old locus tag: J3U91_02016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003586220.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAKIGYARVSTRDQNLARQIEQLHDAGVNKIFQEKLSGKNADRPQLKAMLDYIRDDDEVVVLSLDRLGRNSHDLTDIIETIRHRGAQLNVLNLPSFASIEDPNLRNLITTIIVELYKYIAQEERETIKIRQQQGIEIAKRQGKYKGKIREYGPHSPNRQKRYIYKEACRLLNRKKDGDETLTKRQIARMLGIAPVTLYRIEKYQAEDLANVPRSER
SIO_010081: J3U91_RS09800
subclass of: SO_0000673
so part of: J3U91_RS09800
location: complement(17545..18195)
location: region:17545-18195:-1
so has part: feature:17545-18195:-1:exon

WP_002826718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17545-18195:-1:exon

J3U91_RS09805
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09805
pseudo: true
so part of: sequence
location: complement(18301..>18456)
location: region:18301-18456:-1
so has part: feature:18301-18456:-1:exon
subclass of: SO_0000010

75066808
type: Gene
SIO_000068: ncbigene

position:18301:-1
position: 18301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18456:-1
position: 18456
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18301-18456:-1:exon

J3U91_RS09805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09805
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010009865.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type 1 glutamine amidotransferase
SIO_010081: J3U91_RS09805
subclass of: SO_0000673
so part of: J3U91_RS09805
location: complement(18301..>18456)
location: region:18301-18456:-1
so has part: feature:18301-18456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18301-18456:-1:exon

J3U91_RS09810
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09810
old locus tag: J3U91_02017
so part of: sequence
location: 18536..18787
location: region:18536-18787:1
so has part: feature:18536-18787:1:exon
subclass of: SO_0000010

75066809
type: Gene
SIO_000068: ncbigene

position:18536:1
position: 18536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18787:1
position: 18787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18536-18787:1:exon

J3U91_RS09810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09810
old locus tag: J3U91_02017
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MPTRFDKEFKQNIINLYKQGESAAQLAREYGIGYSTVHKWIQGQAKTQSGKSPDEIKAMEKRLASLSEENEILKKALGFLAQK
SIO_010081: J3U91_RS09810
subclass of: SO_0000673
so part of: J3U91_RS09810
location: 18536..18787
location: region:18536-18787:1
so has part: feature:18536-18787:1:exon

WP_002820011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18536-18787:1:exon

J3U91_RS09815
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
locus tag: J3U91_RS09815
old locus tag: J3U91_02018
so part of: sequence
location: 18843..19682
location: region:18843-19682:1
so has part: feature:18843-19682:1:exon
subclass of: SO_0000010

75066810
type: Gene
SIO_000068: ncbigene

position:18843:1
position: 18843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19682:1
position: 19682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18843-19682:1:exon

J3U91_RS09815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
locus tag: J3U91_RS09815
old locus tag: J3U91_02018
inference: COORDINATES: protein motif:HMM:NF033516.0
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MPNPRCFQSSVLSLSIPKPSKRRAEDADLKQRILRIFAEFKQRYGVMKIHHELNLELQPLQLRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSDDCNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFEDYETAAAFLFEYVHAFYNRKRIHSSLGYQTPLQVEISTLTSQMAA
SIO_010081: J3U91_RS09815
subclass of: SO_0000673
so part of: J3U91_RS09815
location: 18843..19682
location: region:18843-19682:1
so has part: feature:18843-19682:1:exon

WP_002820012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18843-19682:1:exon

J3U91_RS09820
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
gene: prgO
locus tag: J3U91_RS09820
old locus tag: J3U91_02019
so part of: sequence
location: complement(20222..20500)
location: region:20222-20500:-1
so has part: feature:20222-20500:-1:exon
subclass of: SO_0000010

75066811
type: Gene
SIO_000068: ncbigene

position:20222:-1
position: 20222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20500:-1
position: 20500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20222-20500:-1:exon

J3U91_RS09820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
gene: prgO
locus tag: J3U91_RS09820
old locus tag: J3U91_02019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002820004.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA segregation protein PrgO
translation: MALLPSSKEARKHLTAENIKITDDVKTNIAGKKSMSKKRRPIQVDADVLQKFHGVAYAMDIPMYEVARLAIAALQHTLTAAELERYDVKLKK
SIO_010081: J3U91_RS09820
subclass of: SO_0000673
so part of: J3U91_RS09820
location: complement(20222..20500)
location: region:20222-20500:-1
so has part: feature:20222-20500:-1:exon

WP_002820004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20222-20500:-1:exon

J3U91_RS09825
type: Gene
subclass of: SO_0000704
RO_0002162: 1247
gene: prgP
locus tag: J3U91_RS09825
old locus tag: J3U91_02020
so part of: sequence
location: complement(20481..21404)
location: region:20481-21404:-1
so has part: feature:20481-21404:-1:exon
subclass of: SO_0000010

75066812
type: Gene
SIO_000068: ncbigene

position:20481:-1
position: 20481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21404:-1
position: 21404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20481-21404:-1:exon

J3U91_RS09825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1247
gene: prgP
locus tag: J3U91_RS09825
old locus tag: J3U91_02020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003606337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA superfamily DNA segregation protein PrgP
translation: MEEKHDGRVVVLTNMKGGIGKTTDNDLLAVVASQMFGKKVLLIDYDQQGNTTANISRTFDVPVFERSFAKAVMVKDFESSITQVSQNLYIMPTSITSKELNDWLKDTYKDEYSQHLAFVDPLNKLRQQFDLILFDCPPSTDHVVDAVLTAADYVIPLQELKAFAMESTSKFINEVLMPIVTSYAEESRVQILGIIPVLWSRRRDLQMNHYNDLYTKYGEENIFATPIKSSDRLELFGETGIQLNDYVDRRMWSVFADIFCEMNERIAYYESTGDMEGFSYTPQYSDAVQNKVLPKGKEIEINGITTK
SIO_010081: J3U91_RS09825
subclass of: SO_0000673
so part of: J3U91_RS09825
location: complement(20481..21404)
location: region:20481-21404:-1
so has part: feature:20481-21404:-1:exon

WP_002820005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20481-21404:-1:exon