Leuconostoc mesenteroides strain SRCM102733 plasmid unnamed2, complete sequence.
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Leuconostoc.
Leuconostoc mesenteroides SRCM102733 having antimicrbial activity species isolated from Korea Gochujang
Submitted (25-MAR-2018) Functionality Evaluation Team, Microbial Institute for Fermentation Industry, Minsokmaeul-gil 61-27, sunchang 56048, Korea, Republic of
REFSEQ INFORMATION: The reference sequence is identical to\nCP028253.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. v3.0\nExpected Final Version :: yes\nGenome Coverage :: 267.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/15/2023 00:59:27\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,082\nCDSs (total) :: 1,997\nGenes (coding) :: 1,981\nCDSs (with protein) :: 1,981\nGenes (RNA) :: 85\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 3\nPseudo Genes (total) :: 16\nCDSs (without protein) :: 16\nPseudo Genes (ambiguous residues) :: 0 of 16\nPseudo Genes (frameshifted) :: 5 of 16\nPseudo Genes (incomplete) :: 11 of 16\nPseudo Genes (internal stop) :: 1 of 16\nPseudo Genes (multiple problems) :: 1 of 16\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_003550450.1
GO:0016787 - hydrolase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_010016762.1
COORDINATES: protein motif:HMM:NF033516.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010388672.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002816246.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006231893.1
COORDINATES: similar to AA sequence:RefSeq:WP_002415123.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_010001544.1
COORDINATES: protein motif:HMM:NF036624.2
COORDINATES: similar to AA sequence:RefSeq:WP_010001886.1
COORDINATES: similar to AA sequence:RefSeq:WP_014975100.1
COORDINATES: similar to AA sequence:RefSeq:WP_012304964.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012304965.1
COORDINATES: similar to AA sequence:RefSeq:WP_002816170.1
COORDINATES: similar to AA sequence:RefSeq:WP_010015787.1
COORDINATES: similar to AA sequence:RefSeq:WP_014975105.1
COORDINATES: similar to AA sequence:RefSeq:WP_010000717.1
COORDINATES: similar to AA sequence:RefSeq:WP_002816174.1
COORDINATES: similar to AA sequence:RefSeq:WP_002816175.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
replication initiation factor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_002816176.1
COORDINATES: similar to AA sequence:RefSeq:WP_002816177.1
COORDINATES: similar to AA sequence:RefSeq:WP_002816178.1
COORDINATES: similar to AA sequence:RefSeq:WP_004905793.1
TcpE family conjugal transfer membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_002816180.1
COORDINATES: similar to AA sequence:RefSeq:WP_014975112.1
COORDINATES: similar to AA sequence:RefSeq:WP_014975113.1
COORDINATES: similar to AA sequence:RefSeq:WP_016822651.1
COORDINATES: similar to AA sequence:RefSeq:WP_010015769.1
COORDINATES: similar to AA sequence:RefSeq:WP_010000732.1
COORDINATES: similar to AA sequence:RefSeq:WP_010015765.1
COORDINATES: similar to AA sequence:RefSeq:WP_014335292.1
COORDINATES: similar to AA sequence:RefSeq:WP_002816191.1
COORDINATES: similar to AA sequence:RefSeq:WP_010015762.1
COORDINATES: similar to AA sequence:RefSeq:WP_002816193.1
COORDINATES: similar to AA sequence:RefSeq:WP_010016767.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010016766.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010016765.1