Candidatus Nitrososphaera gargensis Ga9.2, complete sequence.
Candidatus Nitrososphaera gargensis Ga9.2
Archaea; Nitrososphaerota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.
The genome of the ammonia-oxidizing Candidatus Nitrososphaera gargensis: insights into metabolic versatility and environmental adaptations
Submitted (30-JUL-2012) Department of Genomic and Applied Microbiology and Goettingen Genomics Laboratory, Georg-August-University Goettingen, Grisebachstr. 8, Goettingen, Lower Saxony 37077, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCP002408.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Assembly-Data-START##\nAssembly Method :: Newbler v. v2.6\nSequencing Technology :: Sanger dideoxy sequencing; 454\n##Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 11/26/2022 01:03:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,596\nCDSs (total) :: 3,545\nGenes (coding) :: 3,500\nCDSs (with protein) :: 3,500\nGenes (RNA) :: 51\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 2\nPseudo Genes (total) :: 45\nCDSs (without protein) :: 45\nPseudo Genes (ambiguous residues) :: 0 of 45\nPseudo Genes (frameshifted) :: 21 of 45\nPseudo Genes (incomplete) :: 28 of 45\nPseudo Genes (internal stop) :: 7 of 45\nPseudo Genes (multiple problems) :: 11 of 45\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:TIGR02928.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF003118.0
DNA-directed DNA polymerase II small subunit
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF014665.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
GO:0006784 - heme A biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF012437.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018036283.1
COORDINATES: similar to AA sequence:RefSeq:WP_011173217.1
COORDINATES: protein motif:HMM:NF013540.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF013522.2
GO:0016853 - isomerase activity [Evidence IEA]
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: protein motif:HMM:TIGR01057.1
GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF004720.0
COORDINATES: protein motif:HMM:NF013920.2
COORDINATES: protein motif:HMM:NF024984.2
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: protein motif:HMM:TIGR02504.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_015020929.1
COORDINATES: protein motif:HMM:NF013143.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
iron chelate uptake ABC transporter family permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015020216.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015020217.1
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015020218.1
COORDINATES: protein motif:HMM:NF016027.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013507.2
COORDINATES: similar to AA sequence:RefSeq:WP_015017755.1
COORDINATES: protein motif:HMM:TIGR03156.1
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015020466.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017765.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015019318.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017753.1
zinc finger C2H2 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015019889.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017604.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017603.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015018416.1
COORDINATES: protein motif:HMM:NF024412.2
COORDINATES: protein motif:HMM:NF014723.2
COORDINATES: similar to AA sequence:RefSeq:WP_015017584.1
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: similar to AA sequence:RefSeq:WP_015017574.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020426.1
phosphomannose isomerase type II C-terminal cupin domain
COORDINATES: protein motif:HMM:NF014430.2
COORDINATES: protein motif:HMM:NF023742.2
COORDINATES: protein motif:HMM:NF013544.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF040570.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017598.1
RNA-guided endonuclease TnpB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015017575.1
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015018514.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015018216.1
COORDINATES: protein motif:HMM:NF003244.0
COORDINATES: protein motif:HMM:NF012679.2
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015018563.1
COORDINATES: protein motif:HMM:NF025280.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020270.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: protein motif:HMM:NF024637.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020752.1
COORDINATES: protein motif:HMM:TIGR01766.2
GO:0004803 - transposase activity [Evidence IEA]
IS200/IS605 family accessory protein TnpB-related protein
COORDINATES: protein motif:HMM:NF004425.0
COORDINATES: protein motif:HMM:NF001629.0
COORDINATES: protein motif:HMM:NF024214.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00317.1
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF002281.0
COORDINATES: protein motif:HMM:NF001989.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012382.2
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017442.2
COORDINATES: protein motif:HMM:NF018933.2
COORDINATES: protein motif:HMM:NF006416.0
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF013224.2
COORDINATES: protein motif:HMM:NF003349.0
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0048034 - heme O biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015545.2
COORDINATES: protein motif:HMM:NF015965.2
COORDINATES: protein motif:HMM:NF006811.0
COORDINATES: protein motif:HMM:NF014086.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020460.1
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019961.1
COORDINATES: protein motif:HMM:TIGR00013.1
GO:0016862 - intramolecular oxidoreductase activity, interconverting keto- and enol-groups [Evidence IEA]
2-hydroxymuconate tautomerase family protein
COORDINATES: protein motif:HMM:NF013885.2
COORDINATES: protein motif:HMM:TIGR02290.1
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019506.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019518.1
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: protein motif:HMM:NF006826.0
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: protein motif:HMM:NF018242.2
COORDINATES: protein motif:HMM:NF017936.2
COORDINATES: protein motif:HMM:NF007171.0
COORDINATES: protein motif:HMM:TIGR03722.2
GO:0061711 - N(6)-L-threonylcarbamoyladenine synthase activity [Evidence IEA]
KEOPS complex N(6)-L-threonylcarbamoyladenine synthase Kae1
COORDINATES: protein motif:HMM:NF025825.2
COORDINATES: protein motif:HMM:NF011463.0
COORDINATES: protein motif:HMM:TIGR00042.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:TIGR03972.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
NIFsuperfamily domain-containing protein
COORDINATES: protein motif:HMM:NF012512.2
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_015020855.1
PEFG-CTERM sorting domain-containing protein
COORDINATES: protein motif:HMM:NF007129.0
COORDINATES: protein motif:HMM:NF006335.0
COORDINATES: protein motif:HMM:NF006336.0
COORDINATES: protein motif:HMM:NF013417.2
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018036189.1
NusA-like transcription termination signal-binding factor
COORDINATES: protein motif:HMM:NF012391.2
COORDINATES: similar to AA sequence:RefSeq:WP_020247627.1
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020059.1
COORDINATES: protein motif:HMM:NF024977.2
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015018697.1
COORDINATES: protein motif:HMM:NF022829.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018334.1
COORDINATES: protein motif:HMM:NF013225.2
COORDINATES: protein motif:HMM:NF006367.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:NF024923.2
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: protein motif:HMM:NF016908.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF002806.0
COORDINATES: protein motif:HMM:TIGR00268.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:TIGR00299.1
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: protein motif:HMM:NF004863.0
COORDINATES: protein motif:HMM:NF033503.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:NF006342.0
COORDINATES: protein motif:HMM:TIGR01020.1
COORDINATES: protein motif:HMM:NF004711.0
COORDINATES: protein motif:HMM:NF013024.2
COORDINATES: protein motif:HMM:NF006341.0
COORDINATES: protein motif:HMM:NF003122.0
COORDINATES: protein motif:HMM:NF014061.2
COORDINATES: protein motif:HMM:NF024587.2
COORDINATES: protein motif:HMM:TIGR00425.1
RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
COORDINATES: protein motif:HMM:NF037270.2
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF013618.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF021098.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018540.1
stabilizes TBP binding to an archaeal box-A promoter; responsible for recruiting RNA polymerase II to the pre-initiation complex; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017536.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018212.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020531.1
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF012600.2
TFIIB-type zinc ribbon-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015017567.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020305.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017566.1
COORDINATES: protein motif:HMM:NF021039.2
COORDINATES: protein motif:HMM:TIGR00702.1
COORDINATES: protein motif:HMM:NF019429.2
COORDINATES: protein motif:HMM:TIGR00636.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF024319.2
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:TIGR00300.1
COORDINATES: protein motif:HMM:NF013324.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013780.2
peptide-methionine (R)-S-oxide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_018036389.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:TIGR00132.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: protein motif:HMM:TIGR00135.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: protein motif:HMM:NF003483.0
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014342.2
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018656.2
formate--phosphoribosylaminoimidazolecarboxamide ligase
COORDINATES: protein motif:HMM:NF012601.2
COORDINATES: protein motif:HMM:NF024212.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF020039.2
GO:0042597 - periplasmic space [Evidence IEA]
GO:0005507 - copper ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024864.2
GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
plastocyanin/azurin family copper-binding protein
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:TIGR01046.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00483.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
translation elongation factor EF-1 subunit alpha
COORDINATES: protein motif:HMM:NF014057.2
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
fructose-1,6-bisphosphate aldolase/phosphatase
COORDINATES: protein motif:HMM:NF003302.0
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013698.2
COORDINATES: protein motif:HMM:NF012517.2
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF039192.1
COORDINATES: protein motif:HMM:NF025034.2
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015017864.1
COORDINATES: protein motif:HMM:NF015882.2
COORDINATES: protein motif:HMM:TIGR01800.1
COORDINATES: protein motif:HMM:TIGR00878.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_018039319.1
GO:0016407 - acetyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
COORDINATES: similar to AA sequence:RefSeq:WP_018036445.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF017803.2
GO:0003674 - molecular_function [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-A CRISPR-associated protein Cas4/Csa1
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021356.2
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00372.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015630.2
COORDINATES: protein motif:HMM:TIGR01587.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02593.1
COORDINATES: protein motif:HMM:TIGR02585.1
type I-B CRISPR-associated protein Cas7/Cst2/DevR
COORDINATES: protein motif:HMM:TIGR01877.1
orc1/cdc6 family replication initiation protein
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF005559.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015020854.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019525.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018013.1
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024804.2
winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF021778.2
COORDINATES: protein motif:HMM:NF016811.2
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF012753.2
COORDINATES: protein motif:HMM:NF019352.2
multicopper oxidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018003339.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF015423.2
trimeric intracellular cation channel family protein
COORDINATES: protein motif:HMM:TIGR00639.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: protein motif:HMM:NF018485.2
COORDINATES: protein motif:HMM:NF013382.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: protein motif:HMM:NF013215.2
COORDINATES: protein motif:HMM:TIGR00928.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017351416.1
COORDINATES: protein motif:HMM:NF007176.0
COORDINATES: protein motif:HMM:TIGR01379.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: protein motif:HMM:NF025774.2
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: protein motif:HMM:NF012335.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019252.1
COORDINATES: protein motif:HMM:NF003037.0
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:NF019013.2
COORDINATES: protein motif:HMM:NF013007.2
COORDINATES: protein motif:HMM:NF036395.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018718.1
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF012235.2
5 10-methylenetetrahydrofolate reductase-like protein
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020844.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017896.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020073.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020343.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020344.1
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF017200.2
COORDINATES: protein motif:HMM:NF024777.2
LamG-like jellyroll fold domain-containing protein
COORDINATES: protein motif:HMM:NF012956.2
COORDINATES: protein motif:HMM:NF014419.2
COORDINATES: protein motif:HMM:TIGR01487.1
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002447.0
COORDINATES: protein motif:HMM:NF020287.2
COORDINATES: protein motif:HMM:NF014678.2
COORDINATES: protein motif:HMM:NF014080.2
COORDINATES: protein motif:HMM:NF002317.0
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015017613.1
COORDINATES: protein motif:HMM:NF001960.0
COORDINATES: protein motif:HMM:TIGR00392.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012982.2
COORDINATES: protein motif:HMM:NF013273.2
COORDINATES: protein motif:HMM:NF003077.0
translation initiation factor IF-2 subunit gamma
COORDINATES: protein motif:HMM:NF037434.2
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF012936.2
asparagine synthase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF012760.2
COORDINATES: protein motif:HMM:NF024172.2
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_086558324.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF027681.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF014565.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:TIGR00813.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015370 - solute:sodium symporter activity [Evidence IEA]
Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system.; Members of the Solute:Sodium Symporter (SSS), TC 2.A.21 as described in tcdb.org, catalyze solute:Na+ symport. Known solutes for members of the family include sugars, amino acids, nucleosides, inositols, vitamins, urea or anions, depending on the system; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015226.2
GO:0015204 - urea transmembrane transporter activity [Evidence IEA]
GO:0071918 - urea transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018003345.1
GO:0016151 - nickel cation binding [Evidence IEA]; GO:0009039 - urease activity [Evidence IEA]
GO:0043419 - urea catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF009682.0
GO:0035550 - urease complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000724295.1
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012346.2
COORDINATES: protein motif:HMM:NF014829.2
COORDINATES: protein motif:HMM:NF013858.2
COORDINATES: protein motif:HMM:TIGR00101.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013899.2
GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002294.0
COORDINATES: protein motif:HMM:NF013188.2
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF001980.0
oxidoreductase FAD/NAD(P)-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015018180.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: protein motif:HMM:NF007161.0
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
decarboxylating 6-phosphogluconate dehydrogenase
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF016115.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018848.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03557.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
TIGR03557 family F420-dependent LLM class oxidoreductase
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03671.1
COORDINATES: protein motif:HMM:NF013341.2
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:NF007180.0
COORDINATES: protein motif:HMM:NF037170.2
COORDINATES: protein motif:HMM:NF013259.2
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF024635.2
COORDINATES: protein motif:HMM:NF013994.2
COORDINATES: protein motif:HMM:NF039193.1
COORDINATES: protein motif:HMM:TIGR01188.1
daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF037832.2
COORDINATES: protein motif:HMM:NF014892.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019455.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF020962.2
type IV toxin-antitoxin system AbiEi family antitoxin
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015019453.1
COORDINATES: protein motif:HMM:NF014044.2
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF040179.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018702.1
COORDINATES: protein motif:HMM:NF013465.2
metal ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF002169.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0010045 - response to nickel cation [Evidence IEA]
nickel-responsive transcriptional regulator NikR
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015020606.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015019414.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019413.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015020291.1
COORDINATES: protein motif:HMM:NF013530.2
SMP-30/gluconolactonase/LRE family protein
COORDINATES: protein motif:HMM:NF015411.2
GO:0050661 - NADP binding [Evidence IEA]
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015018119.1
COORDINATES: protein motif:HMM:NF016563.2
COORDINATES: protein motif:HMM:NF012402.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
beta-propeller fold lactonase family protein
COORDINATES: protein motif:HMM:NF013429.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: protein motif:HMM:NF013213.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: protein motif:HMM:NF017015.2
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015213.2
GO:0033573 - high-affinity iron permease complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0005381 - iron ion transmembrane transporter activity [Evidence IEA]
GO:0034755 - iron ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015017745.1
COORDINATES: protein motif:HMM:NF001679.0
COORDINATES: similar to AA sequence:RefSeq:WP_015018356.1
COORDINATES: protein motif:HMM:NF017704.2
COORDINATES: protein motif:HMM:NF012704.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013146.2
UDP-N-acetylglucosamine-1-phosphate transferase
COORDINATES: protein motif:HMM:NF013125.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018617.1
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF003107.0
Glu-tRNA(Gln) amidotransferase subunit GatE
COORDINATES: protein motif:HMM:NF003217.0
Glu-tRNA(Gln) amidotransferase subunit GatD
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015019865.1
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: protein motif:HMM:NF002243.0
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinamide-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:TIGR03399.1
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF017262.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018285.1
COORDINATES: protein motif:HMM:TIGR00148.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019997.1
COORDINATES: protein motif:HMM:TIGR00322.1
GO:0043364 - glycyl-radical enzyme activating activity [Evidence IEA]
GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IEA]
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF013957.2
GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015019753.1
COORDINATES: protein motif:HMM:NF026297.2
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: protein motif:HMM:NF018546.2
A24 family peptidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015018709.1
COORDINATES: protein motif:HMM:TIGR01083.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016310.2
aconitase X catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF014091.2
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF037144.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020065.1
COORDINATES: protein motif:HMM:TIGR00251.3
COORDINATES: protein motif:HMM:NF019876.2
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01857
archaeal-type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: protein motif:HMM:NF012355.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020114.1
COORDINATES: protein motif:HMM:NF012981.2
COORDINATES: protein motif:HMM:NF039905.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017987.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017705.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020357.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017773.1
COORDINATES: protein motif:HMM:NF014567.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF020976.2
COORDINATES: protein motif:HMM:NF013209.2
COORDINATES: protein motif:HMM:NF021287.2
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: protein motif:HMM:NF013508.2
COORDINATES: protein motif:HMM:NF014845.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018368.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019764.1
COORDINATES: protein motif:HMM:NF003013.0
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010902166.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF012870.2
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: protein motif:HMM:NF024954.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:TIGR00236.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611700.1
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: protein motif:HMM:NF015947.2
COORDINATES: protein motif:HMM:NF024751.2
COORDINATES: protein motif:HMM:TIGR01439.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017578.1
COORDINATES: similar to AA sequence:RefSeq:WP_013156564.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076612400.1
COORDINATES: protein motif:HMM:NF039330.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018519.1
COORDINATES: protein motif:HMM:TIGR04296.1
COORDINATES: protein motif:HMM:NF014505.2
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015017608.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019553.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018485.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019835.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
DNA protection during starvation protein
COORDINATES: protein motif:HMM:TIGR00975.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0042301 - phosphate ion binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: protein motif:HMM:TIGR00974.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00972.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:NF014010.2
COORDINATES: protein motif:HMM:NF014022.2
COORDINATES: protein motif:HMM:NF014028.2
COORDINATES: protein motif:HMM:NF004723.0
COORDINATES: protein motif:HMM:NF012652.2
type II/IV secretion system ATPase subunit
COORDINATES: protein motif:HMM:NF013867.2
protein-glutamate O-methyltransferase CheR
COORDINATES: protein motif:HMM:NF015908.2
chemotaxis protein cheC, inhibitor of mcp methylation
COORDINATES: protein motif:HMM:NF001965.0
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
chemotaxis-specific protein-glutamate methyltransferase CheB
COORDINATES: similar to AA sequence:RefSeq:WP_003244957.1
COORDINATES: protein motif:HMM:NF013731.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF003166.0
GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002537.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IEA]
GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IEA]
COORDINATES: protein motif:HMM:NF038049.1
SelD-related putative sulfur metabolism protein
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019828.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020103.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020106.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020105.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF014099.2
COORDINATES: protein motif:HMM:NF013987.2
COORDINATES: protein motif:HMM:NF037716.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF022659.2
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: similar to AA sequence:RefSeq:WP_015017752.1
COORDINATES: protein motif:HMM:TIGR01297.1
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013734.2
COORDINATES: protein motif:HMM:NF019127.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_171491685.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: protein motif:HMM:NF025178.2
non-heme iron oxygenase ferredoxin subunit
COORDINATES: similar to AA sequence:RefSeq:WP_004045203.1
COORDINATES: protein motif:HMM:NF013738.2
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:NF025736.2
COORDINATES: protein motif:HMM:NF014470.2
GO:0015031 - protein transport [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012289198.1
COORDINATES: protein motif:HMM:NF010147.0
iron-sulfur cluster insertion protein ErpA
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: protein motif:HMM:NF012488.2
alanine--glyoxylate aminotransferase family protein
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF038353.1
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:NF001452.0
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:NF010324.0
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012509.2
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001987.0
COORDINATES: protein motif:HMM:TIGR01012.1
COORDINATES: protein motif:HMM:NF022113.2
LpqB family beta-propeller domain-containing protein
COORDINATES: protein motif:HMM:NF012341.2
COORDINATES: protein motif:HMM:NF003089.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020185.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018923.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020189.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017824.1
COORDINATES: protein motif:HMM:NF015147.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018224.1
COORDINATES: protein motif:HMM:NF006960.0
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037020.2
COORDINATES: protein motif:HMM:NF012334.2
DPP IV N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012417.2
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:TIGR02032.1
COORDINATES: protein motif:HMM:NF012717.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018683.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoB
COORDINATES: protein motif:HMM:NF012549.2
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015018684.1
COORDINATES: protein motif:HMM:NF012373.2
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: similar to AA sequence:RefSeq:WP_011056517.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:TIGR01972.1
COORDINATES: protein motif:HMM:TIGR01974.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012581.2
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:NF015057.2
iron-containing redox enzyme family protein
COORDINATES: protein motif:HMM:NF012364.2
DNA polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF017026.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF013053.2
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_015017651.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020428.1
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: protein motif:HMM:NF016330.2
COORDINATES: protein motif:HMM:NF021169.2
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF016994.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018630.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018632.1
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_015017702.1
COORDINATES: protein motif:HMM:NF020917.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018157.1
COORDINATES: protein motif:HMM:NF021038.2
COORDINATES: protein motif:HMM:NF022072.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018295.1
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF004884.0
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase CofG
COORDINATES: protein motif:HMM:NF005609.0
5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH
COORDINATES: similar to AA sequence:RefSeq:WP_015017993.1
COORDINATES: protein motif:HMM:NF012372.2
COORDINATES: protein motif:HMM:NF013729.2
toll/interleukin-1 receptor domain-containing protein
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: protein motif:HMM:NF024140.2
MCP four helix bundle domain-containing protein
COORDINATES: protein motif:HMM:NF012876.2
COORDINATES: protein motif:HMM:NF013430.2
COORDINATES: protein motif:HMM:NF012575.2
COORDINATES: protein motif:HMM:TIGR00194.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF001503.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000441062.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit beta
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: protein motif:HMM:TIGR01578.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase
COORDINATES: protein motif:HMM:NF012320.2
COORDINATES: protein motif:HMM:NF002258.1
COORDINATES: protein motif:HMM:NF002316.0
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF012428.2
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF025939.2
COORDINATES: nucleotide motif:Rfam:14.4:RF02540
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF01959
COORDINATES: protein motif:HMM:NF015168.2
COORDINATES: protein motif:HMM:NF024304.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF015513.2
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: protein motif:HMM:NF016798.2
COORDINATES: protein motif:HMM:NF041175.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021996.2
COORDINATES: protein motif:HMM:NF025343.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF012387.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019803.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017754.1
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021465.2
COORDINATES: protein motif:HMM:NF013087.2
GO:0008171 - O-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013587.2
AN1-type zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: protein motif:HMM:NF018712.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_015019944.1
COORDINATES: protein motif:HMM:NF024578.2
COORDINATES: protein motif:HMM:NF014479.2
muconolactone Delta-isomerase family protein
COORDINATES: protein motif:HMM:TIGR00653.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018032967.1
COORDINATES: protein motif:HMM:NF019884.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF013254.2
COORDINATES: similar to AA sequence:RefSeq:WP_018039524.1
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF013869.2
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: protein motif:HMM:NF039182.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018124.1
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:NF014019.2
heavy metal-binding domain-containing protein
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF002096.0
COORDINATES: protein motif:HMM:NF018392.2
Sjogren's syndrome/scleroderma autoantigen 1 family protein
COORDINATES: protein motif:HMM:NF002318.0
preprotein translocase subunit Sec61beta
COORDINATES: protein motif:HMM:NF021370.2
COORDINATES: protein motif:HMM:NF016362.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: protein motif:HMM:NF014085.2
GO:0043814 - phospholactate guanylyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01819.1
GO:0043743 - LPPG:FO 2-phospho-L-lactate transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015610.2
COORDINATES: protein motif:HMM:TIGR00446.1
NOL1/NOP2/sun family putative RNA methylase
COORDINATES: protein motif:HMM:TIGR00571.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00373
archaeal type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF002621.0
COORDINATES: protein motif:HMM:NF014757.2
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: protein motif:HMM:TIGR00725.1
COORDINATES: protein motif:HMM:NF012383.2
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF004005.0
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003161.0
COORDINATES: protein motif:HMM:NF028177.2
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF021355.2
beta-propeller domain-containing protein
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:TIGR00197.1
COORDINATES: protein motif:HMM:NF003372.0
COORDINATES: protein motif:HMM:NF002003.0
GO:0003905 - alkylbase DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00758.1
COORDINATES: protein motif:HMM:NF024762.2
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015020807.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018605.1
COORDINATES: protein motif:HMM:NF012263.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
cytochrome b N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015018943.1
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:TIGR00522.1
GO:0004164 - diphthine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01902.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020449.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020450.1
GO:0006526 - arginine biosynthetic process [Evidence IEA]; GO:0019878 - lysine biosynthetic process via aminoadipic acid [Evidence IEA]
alpha-aminoadipate/glutamate carrier protein LysW/ArgW
COORDINATES: protein motif:HMM:NF012885.2
COORDINATES: protein motif:HMM:TIGR00838.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:NF015940.2
COORDINATES: protein motif:HMM:NF015077.2
GO:0010038 - response to metal ion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00111.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014762.2
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF022932.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018925.1
COORDINATES: protein motif:HMM:NF013591.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012452.2
GO:0000502 - proteasome complex [Evidence IEA]
GO:0004175 - endopeptidase activity [Evidence IEA]
GO:0010498 - proteasomal protein catabolic process [Evidence IEA]
archaeal proteasome endopeptidase complex subunit beta
COORDINATES: protein motif:HMM:NF004016.0
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: protein motif:HMM:NF002458.0
3-isopropylmalate dehydratase small subunit
COORDINATES: protein motif:HMM:NF018627.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020499.1
GO:0046507 - UDPsulfoquinovose synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: protein motif:HMM:NF014686.2
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019786.1
COORDINATES: protein motif:HMM:NF017758.2
COORDINATES: protein motif:HMM:NF024845.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020058.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019946.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020526.1
cupredoxin family copper-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015019947.1
COORDINATES: protein motif:HMM:TIGR00281.1
GO:0005515 - protein binding [Evidence IEA]
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013374.2
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014032.2
signal recognition particle subunit SRP19/SEC65 family protein
COORDINATES: protein motif:HMM:TIGR01167.1
LPXTG cell wall anchor domain-containing protein
COORDINATES: protein motif:HMM:TIGR00306.2
COORDINATES: similar to AA sequence:RefSeq:WP_018036547.1
COORDINATES: protein motif:HMM:NF014411.2
COORDINATES: protein motif:HMM:TIGR03991.1
COORDINATES: similar to AA sequence:RefSeq:WP_018036550.1
COORDINATES: protein motif:HMM:TIGR00097.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: protein motif:HMM:NF014218.2
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: similar to AA sequence:RefSeq:WP_018032260.1
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: protein motif:HMM:NF015632.2
COORDINATES: protein motif:HMM:TIGR03675.1
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: protein motif:HMM:NF022223.2
COORDINATES: similar to AA sequence:RefSeq:WP_018036731.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurS
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF002957.0
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: protein motif:HMM:TIGR01736.1
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: similar to AA sequence:RefSeq:WP_018036735.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024773.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018799.1
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020175.1
GO:0050504 - mannosyl-3-phosphoglycerate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017964.2
GO:0004555 - alpha,alpha-trehalase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021486.2
COORDINATES: similar to AA sequence:RefSeq:WP_018039289.1
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF012345.2
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: protein motif:HMM:NF015644.2
COORDINATES: protein motif:HMM:NF014011.2
DNA primase small subunit domain-containing protein
COORDINATES: protein motif:HMM:NF016030.2
COORDINATES: protein motif:HMM:TIGR00587.1
COORDINATES: protein motif:HMM:TIGR01949.1
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
COORDINATES: protein motif:HMM:NF014064.2
COORDINATES: protein motif:HMM:TIGR01093.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01920.1
GO:0004765 - shikimate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01356.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:TIGR00033.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: protein motif:HMM:NF014092.2
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015021000.1
COORDINATES: similar to AA sequence:RefSeq:WP_018036530.1
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018036531.1
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF039482.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018036534.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012444.2
COORDINATES: similar to AA sequence:RefSeq:WP_018036536.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012511.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020043.1
COORDINATES: protein motif:HMM:NF003301.0
DNA repair and recombination protein RadA
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00566.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:NF003251.0
type II glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_015020481.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019447.1
COORDINATES: similar to AA sequence:RefSeq:WP_018036477.1
COORDINATES: protein motif:HMM:NF025078.2
COORDINATES: similar to AA sequence:RefSeq:WP_018036322.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03684.1
COORDINATES: protein motif:HMM:NF014089.2
COORDINATES: protein motif:HMM:NF004912.0
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014533.2
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01162.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:NF004679.0
GO:0034028 - 5-(carboxyamino)imidazole ribonucleotide synthase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: protein motif:HMM:TIGR00081.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF024248.2
COORDINATES: protein motif:HMM:NF015960.2
COORDINATES: protein motif:HMM:NF003075.0
archaeal proteasome endopeptidase complex subunit alpha
COORDINATES: protein motif:HMM:NF014637.2
COORDINATES: similar to AA sequence:RefSeq:WP_018039178.1
COORDINATES: protein motif:HMM:NF012782.2
COORDINATES: protein motif:HMM:NF011118.0
COORDINATES: similar to AA sequence:RefSeq:WP_018036746.1
COORDINATES: similar to AA sequence:RefSeq:WP_018036745.1
COORDINATES: protein motif:HMM:NF003219.0
COORDINATES: protein motif:HMM:NF013027.2
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF013985.2
GO:0030677 - ribonuclease P complex [Evidence IEA]
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006345.0
COORDINATES: similar to AA sequence:RefSeq:WP_018003521.1
COORDINATES: protein motif:HMM:NF028216.2
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF003312.0
COORDINATES: similar to AA sequence:RefSeq:WP_018003460.1
COORDINATES: protein motif:HMM:NF004424.0
COORDINATES: similar to AA sequence:RefSeq:WP_018003458.1
COORDINATES: similar to AA sequence:RefSeq:WP_018003457.1
COORDINATES: protein motif:HMM:NF023594.2
COORDINATES: protein motif:HMM:NF012336.2
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: protein motif:HMM:NF024891.2
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00508.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: protein motif:HMM:TIGR00433.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01820.1
COORDINATES: protein motif:HMM:NF002068.0
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040422.1
COORDINATES: protein motif:HMM:TIGR00324.1
GO:0000214 - tRNA-intron endonuclease complex [Evidence IEA]
GO:0000213 - tRNA-intron endonuclease activity [Evidence IEA]
GO:0006388 - tRNA splicing, via endonucleolytic cleavage and ligation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013982.2
COORDINATES: protein motif:HMM:NF021601.2
COORDINATES: protein motif:HMM:NF014013.2
COORDINATES: protein motif:HMM:NF013202.2
COORDINATES: protein motif:HMM:TIGR00414.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020899.2
COORDINATES: protein motif:HMM:NF006331.0
COORDINATES: similar to AA sequence:RefSeq:WP_015020699.1
COORDINATES: protein motif:HMM:TIGR00296.1
COORDINATES: protein motif:HMM:NF025091.2
isocitrate lyase/PEP mutase family protein
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:NF009623.0
COORDINATES: protein motif:HMM:NF003064.0
translation initiation factor IF-2 subunit alpha
COORDINATES: protein motif:HMM:NF004637.0
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014612.2
COORDINATES: protein motif:HMM:NF017944.2
COORDINATES: protein motif:HMM:NF014425.2
GO:0000030 - mannosyltransferase activity [Evidence IEA]
GO:0006493 - protein O-linked glycosylation [Evidence IEA]
phospholipid carrier-dependent glycosyltransferase
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF014006.2
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF000849.0
cobalt-precorrin-5B (C(1))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_096489982.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013582.2
U6 snRNA-associated Sm-like protein LSm6
COORDINATES: protein motif:HMM:NF020014.2
COORDINATES: protein motif:HMM:NF020341.2
COORDINATES: protein motif:HMM:NF016124.2
tetrahydromethanopterin S-methyltransferase subunit A
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015020094.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020984.1
COORDINATES: protein motif:HMM:NF014910.2
COORDINATES: protein motif:HMM:NF015952.2
GTP-dependent dephospho-CoA kinase family protein
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF006333.0
COORDINATES: protein motif:HMM:NF017867.2
transcription elongation factor subunit Spt4
COORDINATES: protein motif:HMM:TIGR00078.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF014498.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016633.2
COORDINATES: protein motif:HMM:NF009830.0
COORDINATES: protein motif:HMM:NF014047.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018805.1
COORDINATES: protein motif:HMM:NF028207.2
COORDINATES: similar to AA sequence:RefSeq:WP_029910993.1
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF022815.2
COORDINATES: protein motif:HMM:NF003239.0
COORDINATES: protein motif:HMM:NF017831.2
COORDINATES: protein motif:HMM:NF012703.2
COORDINATES: protein motif:HMM:NF012389.2
COORDINATES: protein motif:HMM:NF003314.0
COORDINATES: protein motif:HMM:TIGR00489.1
COORDINATES: protein motif:HMM:TIGR01243.1
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015020748.1
COORDINATES: protein motif:HMM:NF025819.2
COORDINATES: protein motif:HMM:NF012730.2
COORDINATES: protein motif:HMM:TIGR04297.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019578.1
COORDINATES: protein motif:HMM:NF013933.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013565.2
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013795.2
COORDINATES: protein motif:HMM:NF014516.2
chromosome segregation SMC family protein
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:TIGR00408.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016765.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013621.2
adenylyltransferase/cytidyltransferase family protein
COORDINATES: protein motif:HMM:NF014084.2
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF003108.1
COORDINATES: protein motif:HMM:NF025044.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018009.1
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018168.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018167.1
COORDINATES: protein motif:HMM:NF021897.2
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015020194.1
GO:0016152 - mercury (II) reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015020197.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020198.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020200.1
COORDINATES: protein motif:HMM:NF022818.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019680.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019152.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018153.1
COORDINATES: protein motif:HMM:NF014088.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018149.1
COORDINATES: protein motif:HMM:NF012792.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF039835.1
COORDINATES: protein motif:HMM:TIGR02537.1
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015019520.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020044.1
COORDINATES: protein motif:HMM:NF016246.2
COORDINATES: similar to AA sequence:RefSeq:WP_010978102.1
COORDINATES: protein motif:HMM:NF014090.2
COORDINATES: similar to AA sequence:RefSeq:WP_015017655.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015017656.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019487.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017895.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018019.1
COORDINATES: protein motif:HMM:NF021246.2
poly(R)-hydroxyalkanoic acid synthase subunit PhaE
COORDINATES: protein motif:HMM:TIGR01836.1
class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:NF014923.2
COORDINATES: protein motif:HMM:TIGR03666.1
GO:0070967 - coenzyme F420 binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
PPOX class F420-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF011465.1
COORDINATES: protein motif:HMM:NF013029.2
COORDINATES: similar to AA sequence:RefSeq:WP_011251239.1
COORDINATES: protein motif:HMM:NF017239.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018456.1
COORDINATES: protein motif:HMM:NF012385.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: protein motif:HMM:TIGR03674.1
COORDINATES: protein motif:HMM:NF012455.2
GO:0015267 - channel activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015018461.1
COORDINATES: protein motif:HMM:NF001617.0
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF004724.0
succinate dehydrogenase/fumarate reductase flavoprotein subunit
COORDINATES: protein motif:HMM:NF013307.2
succinate dehydrogenase/fumarate reductase
COORDINATES: protein motif:HMM:NF004616.0
succinate dehydrogenase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF013999.2
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF025953.2
COORDINATES: protein motif:HMM:NF015899.2
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF005146.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015019368.1
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF013539.2
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003025.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010335.0
GO:0031012 - extracellular matrix [Evidence IEA]
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00501.1
COORDINATES: protein motif:HMM:NF019075.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020900.1
COORDINATES: protein motif:HMM:NF024848.2
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013706.2
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:NF003169.0
COORDINATES: protein motif:HMM:TIGR02151.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: protein motif:HMM:NF040647.1
COORDINATES: protein motif:HMM:NF024299.2
COORDINATES: protein motif:HMM:TIGR00292.1
sulfide-dependent adenosine diphosphate thiazole synthase
COORDINATES: protein motif:HMM:NF012436.2
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01292.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013379.2
COORDINATES: protein motif:HMM:TIGR01916.1
GO:0043773 - coenzyme F420-0 gamma-glutamyl ligase activity [Evidence IEA]
alpha/beta hydrolase fold domain-containing protein
COORDINATES: protein motif:HMM:TIGR00338.1
GO:0036424 - L-phosphoserine phosphatase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: protein motif:HMM:NF019902.2
COORDINATES: protein motif:HMM:NF003140.0
COORDINATES: protein motif:HMM:NF003139.0
COORDINATES: protein motif:HMM:NF016980.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020308.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF015018.2
COORDINATES: protein motif:HMM:NF002288.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0006566 - threonine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012596.2
COORDINATES: protein motif:HMM:NF018129.2
COORDINATES: protein motif:HMM:NF016977.2
COORDINATES: protein motif:HMM:NF012944.2
GO:0012506 - vesicle membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF012621.2
heavy-metal-associated domain-containing protein
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015019444.1
COORDINATES: protein motif:HMM:NF014860.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:TIGR00574.1
COORDINATES: protein motif:HMM:NF015268.2
COORDINATES: protein motif:HMM:NF016050.2
COORDINATES: protein motif:HMM:NF002207.0
COORDINATES: similar to AA sequence:RefSeq:WP_015020276.1
COORDINATES: similar to AA sequence:RefSeq:WP_018039288.1
COORDINATES: protein motif:HMM:NF028222.2
COORDINATES: protein motif:HMM:NF006081.0
GO:0016829 - lyase activity [Evidence IEA]
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase
COORDINATES: protein motif:HMM:NF024865.2
COORDINATES: protein motif:HMM:NF013412.2
COORDINATES: protein motif:HMM:TIGR00118.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: protein motif:HMM:NF008864.0
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002085.0
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012407.2
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: protein motif:HMM:NF009475.0
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF009455.0
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
COORDINATES: protein motif:HMM:NF021525.2
nitroreductase/quinone reductase family protein
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:TIGR00877.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014881.2
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: protein motif:HMM:TIGR00147.1
diacylglycerol kinase family lipid kinase
COORDINATES: protein motif:HMM:NF003214.0
COORDINATES: similar to AA sequence:RefSeq:WP_018032376.1
COORDINATES: protein motif:HMM:NF004684.0
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024997.2
COORDINATES: protein motif:HMM:TIGR00162.1
proteasome assembly chaperone family protein
COORDINATES: protein motif:HMM:NF013499.2
OB-fold nucleic acid binding domain-containing protein
COORDINATES: protein motif:HMM:NF001208.0
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015018895.1
COORDINATES: protein motif:HMM:NF037920.2
COORDINATES: protein motif:HMM:NF014560.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017038.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018376.1
COORDINATES: protein motif:HMM:NF006762.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: protein motif:HMM:TIGR00405.1
COORDINATES: protein motif:HMM:NF016312.2
COORDINATES: protein motif:HMM:NF013222.2
COORDINATES: protein motif:HMM:NF006343.0
COORDINATES: protein motif:HMM:NF006332.0
COORDINATES: protein motif:HMM:NF018756.2
COORDINATES: protein motif:HMM:NF038011.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015018968.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF025017.2
COORDINATES: protein motif:HMM:NF000801.0
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01251.1
COORDINATES: protein motif:HMM:NF015690.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019726.1
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: protein motif:HMM:NF015126.2
COORDINATES: protein motif:HMM:NF014056.2
COORDINATES: protein motif:HMM:NF015331.2
COORDINATES: protein motif:HMM:NF002022.0
NAD(P)-dependent glycerol-1-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF016363.2
GO:0090529 - cell septum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF014610.2
COORDINATES: protein motif:HMM:TIGR00471.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF003210.0
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:NF008927.0
COORDINATES: protein motif:HMM:NF001985.0
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018520.1
COORDINATES: protein motif:HMM:NF028455.2
COORDINATES: protein motif:HMM:NF014752.2
COORDINATES: protein motif:HMM:TIGR02338.1
COORDINATES: protein motif:HMM:NF011470.1
COORDINATES: protein motif:HMM:NF013905.2
COORDINATES: protein motif:HMM:NF003282.1
GO:0000178 - exosome (RNase complex) [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02065.1
COORDINATES: protein motif:HMM:NF003181.1
exosome complex RNA-binding protein Rrp4
COORDINATES: protein motif:HMM:TIGR00291.1
COORDINATES: protein motif:HMM:NF013366.2
COORDINATES: protein motif:HMM:NF028445.2
COORDINATES: protein motif:HMM:NF005004.0
COORDINATES: protein motif:HMM:NF012598.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018890.1
COORDINATES: protein motif:HMM:NF016166.2
COORDINATES: protein motif:HMM:NF019351.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018241.1
COORDINATES: protein motif:HMM:TIGR01127.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF020129.2
COORDINATES: similar to AA sequence:RefSeq:WP_004398583.1
COORDINATES: similar to AA sequence:RefSeq:WP_018036373.1
COORDINATES: protein motif:HMM:NF006821.0
GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012616.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020034.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017573.1
COORDINATES: protein motif:HMM:NF017380.2
COORDINATES: protein motif:HMM:TIGR00658.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00064.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR00293.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018036374.1
COORDINATES: protein motif:HMM:TIGR00395.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03683.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015017637.1
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:NF017917.2
COORDINATES: protein motif:HMM:TIGR02087.1
COORDINATES: protein motif:HMM:TIGR02086.1
COORDINATES: protein motif:HMM:NF013543.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020112.1
COORDINATES: protein motif:HMM:TIGR02476.1
GO:0016722 - oxidoreductase activity, acting on metal ions [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0032363 - FMN catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014447.2
COORDINATES: protein motif:HMM:NF039402.1
COORDINATES: protein motif:HMM:TIGR00229.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_015019617.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018984.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019007.1
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: similar to AA sequence:RefSeq:WP_000861162.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020674.1
COORDINATES: protein motif:HMM:TIGR00640.1
cobalamin B12-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00750.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_018036474.1
GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015017649.1
COORDINATES: similar to AA sequence:RefSeq:WP_018036475.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018036351.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020809.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020810.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020805.1
methane monooxygenase/ammonia monooxygenase subunit C
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: protein motif:HMM:NF016787.2
COORDINATES: protein motif:HMM:NF015812.2
COORDINATES: protein motif:HMM:NF013336.2
COORDINATES: similar to AA sequence:RefSeq:WP_018031397.1
COORDINATES: protein motif:HMM:NF016619.2
methane monooxygenase/ammonia monooxygenase subunit B
COORDINATES: protein motif:HMM:TIGR01466.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004938.0
COORDINATES: protein motif:HMM:TIGR00590.1
GO:0030337 - DNA polymerase processivity factor activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
proliferating cell nuclear antigen (pcna)
COORDINATES: protein motif:HMM:TIGR01384.1
GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF025040.2
RpoL/Rpb11 RNA polymerase subunit family protein
COORDINATES: protein motif:HMM:TIGR04337.1
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF024344.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018252.1
COORDINATES: protein motif:HMM:TIGR03026.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004326.0
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
PqqD family peptide modification chaperone
COORDINATES: protein motif:HMM:NF003211.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF006230.0
COORDINATES: protein motif:HMM:NF016854.2
COORDINATES: protein motif:HMM:NF002669.0
COORDINATES: protein motif:HMM:NF015945.2
COORDINATES: protein motif:HMM:TIGR01915.1
COORDINATES: protein motif:HMM:NF013694.2
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF012343.2
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020456.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019888.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020608.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019497.1
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020811.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018256.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020803.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018305.1
COORDINATES: protein motif:HMM:NF014641.2
COORDINATES: protein motif:HMM:NF004790.0
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:TIGR00212.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000818.0
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF013995.2
COORDINATES: protein motif:HMM:NF013462.2
COORDINATES: protein motif:HMM:NF013322.2
COORDINATES: protein motif:HMM:NF014040.2
COORDINATES: protein motif:HMM:TIGR02076.1
COORDINATES: protein motif:HMM:NF039904.1
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:NF019374.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019294.1
COORDINATES: protein motif:HMM:NF025063.2
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018522.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018525.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018524.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018523.1
COORDINATES: protein motif:HMM:NF014795.2
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF002018.0
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_015019933.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018327.1
COORDINATES: protein motif:HMM:NF005034.0
COORDINATES: protein motif:HMM:NF039222.1
COORDINATES: similar to AA sequence:RefSeq:WP_011012977.1
COORDINATES: protein motif:HMM:NF016032.2
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
glutamate-cysteine ligase family protein
COORDINATES: protein motif:HMM:NF020083.2
COORDINATES: protein motif:HMM:NF003269.0
COORDINATES: protein motif:HMM:NF008909.0
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF012398.2
NAD-dependent succinate-semialdehyde dehydrogenase
magnesium transporter CorA family protein
COORDINATES: protein motif:HMM:TIGR00037.1
COORDINATES: protein motif:HMM:TIGR00290.1
COORDINATES: protein motif:HMM:NF012662.2
GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
signal recognition particle receptor subunit alpha
COORDINATES: protein motif:HMM:TIGR01213.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0031119 - tRNA pseudouridine synthesis [Evidence IEA]
tRNA pseudouridine(54/55) synthase Pus10
COORDINATES: similar to AA sequence:RefSeq:WP_018036542.1
COORDINATES: protein motif:HMM:NF014021.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018036543.1
COORDINATES: protein motif:HMM:NF013450.2
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03699.1
cyclic dehypoxanthinyl futalosine synthase
COORDINATES: protein motif:HMM:TIGR00423.1
COORDINATES: protein motif:HMM:NF014658.2
COORDINATES: protein motif:HMM:TIGR00490.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019073.1
COORDINATES: protein motif:HMM:NF018583.2
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01536.1
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: similar to AA sequence:RefSeq:WP_018036724.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018602.1
COORDINATES: protein motif:HMM:NF015378.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018608.1
COORDINATES: protein motif:HMM:NF024590.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019436.1
COORDINATES: protein motif:HMM:NF022986.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019451.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019439.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019441.1
COORDINATES: similar to AA sequence:RefSeq:WP_018036725.1
formate--phosphoribosylaminoimidazolecarboxamide ligase family protein
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018036729.1
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: protein motif:HMM:NF014443.2
COORDINATES: similar to AA sequence:RefSeq:WP_011291581.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017551.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017552.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017553.1
COORDINATES: protein motif:HMM:TIGR04498.1
COORDINATES: protein motif:HMM:NF020588.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023560.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020313.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_015017616.1
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_015020264.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019695.1
COORDINATES: protein motif:HMM:NF002232.0
COORDINATES: protein motif:HMM:NF003078.0
COORDINATES: protein motif:HMM:NF001908.0
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015020797.1
COORDINATES: protein motif:HMM:NF003080.0
COORDINATES: protein motif:HMM:TIGR03677.1
COORDINATES: protein motif:HMM:TIGR03990.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
GO:0043231 - intracellular membrane-bounded organelle [Evidence IEA]
CDGSH iron-sulfur domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015020665.1
COORDINATES: protein motif:HMM:TIGR00378.1
GO:0015368 - calcium:cation antiporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013350.2
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_003247145.1
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: protein motif:HMM:NF005558.0
COORDINATES: similar to AA sequence:RefSeq:WP_015017758.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019655.1
COORDINATES: protein motif:HMM:TIGR03710.1
GO:0018491 - 2-oxobutyrate synthase activity [Evidence IEA]; GO:0047553 - 2-oxoglutarate synthase activity [Evidence IEA]; GO:0019164 - pyruvate synthase activity [Evidence IEA]
2-oxoacid:ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF041171.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: protein motif:HMM:TIGR01978.1
COORDINATES: protein motif:HMM:NF018484.2
COORDINATES: protein motif:HMM:NF020398.2
COORDINATES: protein motif:HMM:NF037131.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020651.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018020.1
COORDINATES: similar to AA sequence:RefSeq:WP_018033365.1
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress.; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015018335.1
COORDINATES: protein motif:HMM:NF025033.2
helix-turn-helix transcriptional regulator
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: protein motif:HMM:NF013984.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:NF013411.2
COORDINATES: protein motif:HMM:NF027889.2
COORDINATES: protein motif:HMM:NF012544.2
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF017454.2
type VI secretion system tube protein Hcp
COORDINATES: similar to AA sequence:RefSeq:WP_015020832.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013355.2
COORDINATES: protein motif:HMM:NF013234.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018663.1
COORDINATES: protein motif:HMM:NF003218.0
COORDINATES: protein motif:HMM:NF016304.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019401.1
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: protein motif:HMM:NF006330.0
COORDINATES: protein motif:HMM:NF040947.1
GO:0019878 - lysine biosynthetic process via aminoadipic acid [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00707.1
GO:0008483 - transaminase activity [Evidence IEA]
GO:0006525 - arginine metabolic process [Evidence IEA]
acetylornithine/succinylornithine family transaminase
COORDINATES: protein motif:HMM:NF010662.0
[LysW]-aminoadipate/[LysW]-glutamate kinase
COORDINATES: protein motif:HMM:TIGR01850.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_015018929.1
COORDINATES: similar to AA sequence:RefSeq:WP_015018930.1
COORDINATES: similar to AA sequence:RefSeq:WP_000412328.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025210.2
COORDINATES: protein motif:HMM:NF013713.2
COORDINATES: protein motif:HMM:NF014646.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020033.1
COORDINATES: protein motif:HMM:NF016925.2
COORDINATES: similar to AA sequence:RefSeq:WP_015017647.1
COORDINATES: protein motif:HMM:NF003084.0
COORDINATES: protein motif:HMM:TIGR03685.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019150.1
COORDINATES: protein motif:HMM:NF008035.0
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000034699.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF013212.2
COORDINATES: protein motif:HMM:NF003067.0
translation initiation factor IF-2 subunit beta
COORDINATES: protein motif:HMM:NF015124.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018959.1
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR00836.1
COORDINATES: protein motif:HMM:NF014433.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015446 - ATPase-coupled arsenite transmembrane transporter activity [Evidence IEA]
GO:0071722 - detoxification of arsenic-containing substance [Evidence IEA]
COORDINATES: protein motif:HMM:NF024280.2
COORDINATES: protein motif:HMM:TIGR00532.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase, degradative
COORDINATES: protein motif:HMM:NF013773.2
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012687.2
COORDINATES: protein motif:HMM:TIGR01855.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: protein motif:HMM:TIGR00007.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_000880088.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_015018985.1
COORDINATES: protein motif:HMM:NF011016.0
COORDINATES: protein motif:HMM:NF014803.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020508.1
COORDINATES: protein motif:HMM:NF034126.3
exosome complex RNA-binding protein Csl4
COORDINATES: protein motif:HMM:NF008865.0
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003226803.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01496.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013979.2
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]; GO:0006596 - polyamine biosynthetic process [Evidence IEA]
arginine decarboxylase, pyruvoyl-dependent
COORDINATES: protein motif:HMM:NF019845.2
COORDINATES: protein motif:HMM:NF027286.2
DNA starvation/stationary phase protection protein
COORDINATES: protein motif:HMM:NF009687.0
COORDINATES: protein motif:HMM:NF014075.2
COORDINATES: protein motif:HMM:NF014305.2
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_000743900.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021350.2
AAA-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015020728.1
COORDINATES: protein motif:HMM:NF013397.2
formate/nitrite transporter family protein
COORDINATES: protein motif:HMM:NF014603.2
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018166.1
COORDINATES: protein motif:HMM:NF018961.2
COORDINATES: protein motif:HMM:NF037139.2
COORDINATES: protein motif:HMM:NF012797.2
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: protein motif:HMM:NF041120.1
COORDINATES: protein motif:HMM:NF014037.2
COORDINATES: protein motif:HMM:NF014093.2
GO:0033178 - proton-transporting two-sector ATPase complex, catalytic domain [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATP synthase subunit E family protein
COORDINATES: protein motif:HMM:NF003220.0
COORDINATES: protein motif:HMM:NF003235.0
COORDINATES: protein motif:HMM:TIGR00309.1
GO:0016471 - vacuolar proton-transporting V-type ATPase complex [Evidence IEA]
GO:0008553 - P-type proton-exporting transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: protein motif:HMM:NF013647.2
V-type ATPase 116kDa subunit family protein
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: protein motif:HMM:TIGR00240.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015020339.1
COORDINATES: protein motif:HMM:NF026244.2
COORDINATES: protein motif:HMM:TIGR00432.2
GO:0016763 - pentosyltransferase activity [Evidence IEA]
tRNA guanosine(15) transglycosylase TgtA
COORDINATES: protein motif:HMM:NF016382.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020293.1
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020669.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020668.1
COORDINATES: protein motif:HMM:NF027971.2
COORDINATES: protein motif:HMM:TIGR00435.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015019956.1
COORDINATES: protein motif:HMM:NF001100.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014708.2
COORDINATES: protein motif:HMM:NF013422.2
COORDINATES: protein motif:HMM:NF025700.2
COORDINATES: protein motif:HMM:NF025175.2
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:NF013761.2
COORDINATES: protein motif:HMM:NF025006.2
COORDINATES: protein motif:HMM:TIGR01508.1
2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase
COORDINATES: protein motif:HMM:NF005552.0
COORDINATES: similar to AA sequence:RefSeq:WP_018039323.1
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00114.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018039322.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: protein motif:HMM:TIGR00187.1
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: similar to AA sequence:RefSeq:WP_048061037.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020591.1
COORDINATES: protein motif:HMM:NF013292.2
COORDINATES: protein motif:HMM:NF012888.2
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: protein motif:HMM:NF004036.0
COORDINATES: protein motif:HMM:NF013766.2
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_015017619.1
COORDINATES: protein motif:HMM:NF024747.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020283.1
COORDINATES: protein motif:HMM:NF012722.2
COORDINATES: similar to AA sequence:RefSeq:WP_015018905.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019965.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019967.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020051.1
COORDINATES: protein motif:HMM:NF002016.0
COORDINATES: protein motif:HMM:TIGR00670.1
COORDINATES: protein motif:HMM:TIGR00149.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:NF036806.2
COORDINATES: protein motif:HMM:NF016001.2
COORDINATES: protein motif:HMM:TIGR00323.1
COORDINATES: protein motif:HMM:NF013183.2
COORDINATES: similar to AA sequence:RefSeq:WP_015020842.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020417.1
COORDINATES: protein motif:HMM:NF012899.2
COORDINATES: protein motif:HMM:NF012783.2
COORDINATES: protein motif:HMM:TIGR00341.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020831.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020931.1
COORDINATES: protein motif:HMM:NF021427.2
COORDINATES: similar to AA sequence:RefSeq:WP_015017893.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017675.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF015089.2
COORDINATES: similar to AA sequence:RefSeq:WP_018039278.1
COORDINATES: protein motif:HMM:NF016265.2
GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF003295.0
COORDINATES: protein motif:HMM:NF012441.2
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016048.2
COORDINATES: protein motif:HMM:NF013856.2
COORDINATES: similar to AA sequence:RefSeq:WP_003430738.1
COORDINATES: protein motif:HMM:NF002636.0
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: similar to AA sequence:RefSeq:WP_018036727.1
COORDINATES: protein motif:HMM:TIGR03665.1
COORDINATES: protein motif:HMM:NF016157.2
COORDINATES: similar to AA sequence:RefSeq:WP_015019604.1
COORDINATES: protein motif:HMM:TIGR00308.1
GO:0004809 - tRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO:0030488 - tRNA methylation [Evidence IEA]
tRNA (guanine(10)-N(2))-dimethyltransferase
COORDINATES: protein motif:HMM:TIGR00729.1
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003276.0
fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
COORDINATES: protein motif:HMM:NF013922.2
pre-mRNA processing ribonucleoprotein, snoRNA-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR02228.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012572.2
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:NF014527.2
class I SAM-dependent methyltransferase family protein
COORDINATES: protein motif:HMM:NF009945.0
ribosome biogenesis/translation initiation ATPase RLI
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF002083.0
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012670.2
COORDINATES: protein motif:HMM:NF014798.2
COORDINATES: protein motif:HMM:TIGR00875.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015017549.1
COORDINATES: similar to AA sequence:RefSeq:WP_015017775.1
COORDINATES: similar to AA sequence:RefSeq:WP_015020846.1
COORDINATES: protein motif:HMM:TIGR00264.2
nascent polypeptide-associated complex protein
COORDINATES: protein motif:HMM:NF013626.2
COORDINATES: protein motif:HMM:TIGR00270.2
COORDINATES: protein motif:HMM:NF003048.0
tRNA (cytidine(56)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF013592.2
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025793.2
COORDINATES: protein motif:HMM:NF006375.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018039292.1
COORDINATES: protein motif:HMM:NF024724.2
COORDINATES: protein motif:HMM:TIGR01467.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01465.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015019304.1
COORDINATES: protein motif:HMM:NF018580.2
COORDINATES: protein motif:HMM:NF024431.2
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00055.1
COORDINATES: similar to AA sequence:RefSeq:WP_015019119.1
COORDINATES: protein motif:HMM:NF024257.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF010587.0
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025392.2
COORDINATES: protein motif:HMM:NF018455.2
COORDINATES: protein motif:HMM:NF013730.2
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF014703.2
COORDINATES: protein motif:HMM:NF008823.0
COORDINATES: protein motif:HMM:NF013607.2
COORDINATES: protein motif:HMM:NF014052.2
COORDINATES: protein motif:HMM:TIGR02467.1
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_015020666.1
COORDINATES: protein motif:HMM:NF020078.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: protein motif:HMM:NF000768.0
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006050.0
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003103.0
COORDINATES: protein motif:HMM:NF003198.0
GO:0047294 - phosphoglycerol geranylgeranyltransferase activity [Evidence IEA]
GO:0006650 - glycerophospholipid metabolic process [Evidence IEA]
geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase