Candidatus Methanomethylophilus alvus Mx1201, complete sequence.
Candidatus Methanomethylophilus alvus Mx1201
Archaea; Candidatus Thermoplasmatota; Thermoplasmata; Methanomassiliicoccales; Candidatus Methanomethylophilaceae; Candidatus Methanomethylophilus.
Genome sequence of 'Candidatus Methanomethylophilus alvus' Mx1201, a methanogenic archaeon from the human gut belonging to a seventh order of methanogens
Submitted (13-NOV-2013) EA 4678 CIDAM - 5e CBRV, Universite d'Auvergne - Clermont Universite, 28 place Henri Dunant, Clermont-Ferrand 63000, France
Submitted (08-OCT-2013) EA 4678 CIDAM - 5e CBRV, Universite d'Auvergne - Clermont Universite, 28 place Henri Dunant, Clermont-Ferrand 63000, France
Submitted (15-JAN-2013) EA 4678 CIDAM - 5e CBRV, Universite d'Auvergne - Clermont Universite, 28 place Henri Dunant, Clermont-Ferrand 63000, France
Submitted (28-JAN-2012) EA CIDAM 4678 - CBRV, PRES Clermont Universite - Universite d'Auvergne, 28 Place Henri Dunant, Clremont-Ferrand 63001, France
REFSEQ INFORMATION: The reference sequence is identical to\nCP004049.1.\nSource DNA available from EA CIDAM 4678, Facultes de\nmedecine-Pharmacie, Place Henri Dunant, F-63001 Clermont-Ferrand,\nFrance.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Assembly-Data-START##\nAssembly Method :: Newbler v. 2.6\nSequencing Technology :: 454\n##Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/23/2023 03:37:53\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,675\nCDSs (total) :: 1,623\nGenes (coding) :: 1,613\nCDSs (with protein) :: 1,613\nGenes (RNA) :: 52\nrRNAs :: 2, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 1 (5S, 16S, 23S)\ntRNAs :: 46\nncRNAs :: 2\nPseudo Genes (total) :: 10\nCDSs (without protein) :: 10\nPseudo Genes (ambiguous residues) :: 0 of 10\nPseudo Genes (frameshifted) :: 0 of 10\nPseudo Genes (incomplete) :: 2 of 10\nPseudo Genes (internal stop) :: 8 of 10\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_019178385.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
orc1/cdc6 family replication initiation protein
COORDINATES: similar to AA sequence:RefSeq:WP_013362653.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178383.1
COORDINATES: protein motif:HMM:NF013647.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178380.1
GO:0033178 - proton-transporting two-sector ATPase complex, catalytic domain [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
V-type ATP synthase subunit E family protein
COORDINATES: protein motif:HMM:TIGR02923.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178377.1
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178376.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178375.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178374.1
COORDINATES: protein motif:HMM:NF003118.0
DNA-directed DNA polymerase II small subunit
COORDINATES: protein motif:HMM:NF013994.2
COORDINATES: protein motif:HMM:NF013429.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: protein motif:HMM:NF014566.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF003162.0
COORDINATES: protein motif:HMM:NF024304.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF037143.2
COORDINATES: protein motif:HMM:NF012234.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024248.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176800.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:TIGR00324.1
GO:0000214 - tRNA-intron endonuclease complex [Evidence IEA]
GO:0000213 - tRNA-intron endonuclease activity [Evidence IEA]
GO:0006388 - tRNA splicing, via endonucleolytic cleavage and ligation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021102.2
COORDINATES: protein motif:HMM:NF012600.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178358.1
COORDINATES: protein motif:HMM:NF016308.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178351.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_019178350.1
GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014664.2
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019178347.1
COORDINATES: protein motif:HMM:NF003319.0
COORDINATES: similar to AA sequence:RefSeq:WP_019178309.1
GO:0006886 - intracellular protein transport [Evidence IEA]
protein translocase SEC61 complex subunit gamma
COORDINATES: protein motif:HMM:TIGR00405.1
COORDINATES: similar to AA sequence:RefSeq:WP_020449552.1
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178312.1
COORDINATES: protein motif:HMM:NF003098.0
COORDINATES: similar to AA sequence:RefSeq:WP_019178314.1
COORDINATES: protein motif:HMM:NF012320.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178301.1
COORDINATES: protein motif:HMM:NF010324.0
phosphopantothenate/pantothenate synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_019178355.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF024635.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178298.1
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF016030.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178296.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178295.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF012939.2
COORDINATES: protein motif:HMM:NF019374.2
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: protein motif:HMM:NF012695.2
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: protein motif:HMM:TIGR01662.1
COORDINATES: protein motif:HMM:NF024969.2
COORDINATES: protein motif:HMM:NF005146.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF021134.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF013752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF016852.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176373.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:NF013308.2
COORDINATES: protein motif:HMM:NF012382.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: protein motif:HMM:TIGR01207.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:TIGR01221.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01181.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01214.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_015504420.1
bifunctional phosphoglucose/phosphomannose isomerase
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_015503987.1
COORDINATES: similar to AA sequence:RefSeq:WP_015491644.1
COORDINATES: similar to AA sequence:RefSeq:WP_015491645.1
COORDINATES: protein motif:HMM:NF013415.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178627.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178630.1
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178714.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178715.1
translation initiation factor IF-2 subunit gamma
COORDINATES: protein motif:HMM:NF037434.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178690.1
COORDINATES: protein motif:HMM:NF012387.2
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: protein motif:HMM:NF012696.2
GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF039835.1
bacterial Ig-like domain-containing protein
COORDINATES: protein motif:HMM:NF039402.1
COORDINATES: protein motif:HMM:TIGR02385.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015504036.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_019178737.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178734.1
COORDINATES: protein motif:HMM:TIGR00408.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020287.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178720.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurS
COORDINATES: similar to AA sequence:RefSeq:WP_019178719.1
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: similar to AA sequence:RefSeq:WP_019178718.1
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: similar to AA sequence:RefSeq:WP_019178717.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF017959.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178751.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178753.1
COORDINATES: protein motif:HMM:TIGR00270.2
COORDINATES: protein motif:HMM:NF021513.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178156.1
COORDINATES: similar to AA sequence:RefSeq:WP_020448090.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_015491705.1
formate--phosphoribosylaminoimidazolecarboxamide ligase
COORDINATES: similar to AA sequence:RefSeq:WP_019178142.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019178131.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:TIGR01327.1
GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178127.1
COORDINATES: protein motif:HMM:NF018483.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176167.1
COORDINATES: protein motif:HMM:NF014610.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176163.1
exosome complex RNA-binding protein Csl4
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176210.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:TIGR00078.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:TIGR01384.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176118.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176117.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176116.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176115.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017634.2
COORDINATES: protein motif:HMM:NF014527.2
class I SAM-dependent methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176105.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
GO:0046033 - AMP metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176104.1
GO:0000287 - magnesium ion binding [Evidence IEA]
RuBisCO large subunit C-terminal-like domain-containing protein
COORDINATES: protein motif:HMM:TIGR03327.1
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176192.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: similar to AA sequence:RefSeq:WP_019176190.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176187.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176186.1
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176185.1
TIGR04190 family B12-binding domain/radical SAM domain protein
COORDINATES: protein motif:HMM:TIGR00112.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012717.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176182.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoB
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176180.1
COORDINATES: protein motif:HMM:NF012373.2
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF012709.2
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176175.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019176173.1
COORDINATES: protein motif:HMM:TIGR01770.1
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:TIGR02032.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176168.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178121.1
CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase
COORDINATES: similar to AA sequence:RefSeq:WP_019178120.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00758.1
COORDINATES: protein motif:HMM:TIGR01460.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016005.2
GO:0051304 - chromosome separation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178106.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178103.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178102.1
COORDINATES: protein motif:HMM:NF013982.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178100.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01230.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015491775.1
COORDINATES: protein motif:HMM:NF013922.2
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:TIGR00524.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:TIGR00227.1
2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase
COORDINATES: protein motif:HMM:TIGR03399.1
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF013488.2
COORDINATES: protein motif:HMM:NF025865.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF012398.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: protein motif:HMM:NF014072.2
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: protein motif:HMM:NF033503.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:NF016232.2
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: protein motif:HMM:NF003198.0
GO:0047294 - phosphoglycerol geranylgeranyltransferase activity [Evidence IEA]
GO:0006650 - glycerophospholipid metabolic process [Evidence IEA]
geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase
COORDINATES: protein motif:HMM:NF013226.2
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013347.2
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018031397.1
DNA repair and recombination protein RadA
COORDINATES: protein motif:HMM:TIGR03671.1
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176365.1
COORDINATES: protein motif:HMM:NF024660.2
PHP-associated domain-containing protein
COORDINATES: protein motif:HMM:NF014628.2
COORDINATES: protein motif:HMM:TIGR04265.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025636.2
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177844.1
COORDINATES: protein motif:HMM:NF024057.2
COORDINATES: protein motif:HMM:NF040371.1
COORDINATES: protein motif:HMM:NF014689.2
manganese efflux pump MntP family protein
COORDINATES: protein motif:HMM:TIGR00162.1
proteasome assembly chaperone family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176369.1
translation initiation factor IF-2 subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_019176370.1
COORDINATES: similar to AA sequence:RefSeq:WP_015504179.1
COORDINATES: protein motif:HMM:NF001924.0
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176376.1
COORDINATES: protein motif:HMM:TIGR01511.1
COORDINATES: protein motif:HMM:NF012621.2
heavy-metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF024487.2
COORDINATES: protein motif:HMM:NF014073.2
tripartite tricarboxylate transporter permease
COORDINATES: protein motif:HMM:NF002635.0
hypoxanthine/guanine phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019177540.1
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177220.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177471.1
COORDINATES: protein motif:HMM:NF011470.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177469.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177468.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177467.1
GO:0000178 - exosome (RNase complex) [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177466.1
COORDINATES: protein motif:HMM:NF003181.1
exosome complex RNA-binding protein Rrp4
COORDINATES: protein motif:HMM:TIGR00291.1
COORDINATES: protein motif:HMM:NF003075.0
GO:0000502 - proteasome complex [Evidence IEA]
GO:0004175 - endopeptidase activity [Evidence IEA]
GO:0010498 - proteasomal protein catabolic process [Evidence IEA]
archaeal proteasome endopeptidase complex subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_019177460.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177459.1
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: similar to AA sequence:RefSeq:WP_012302733.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:TIGR00196.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: protein motif:HMM:NF014032.2
signal recognition particle subunit SRP19/SEC65 family protein
COORDINATES: protein motif:HMM:TIGR00307.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF025933.2
TerB family tellurite resistance protein
COORDINATES: protein motif:HMM:NF024981.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF012936.2
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01959
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013694.2
magnesium transporter CorA family protein
COORDINATES: protein motif:HMM:TIGR01578.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019177445.1
translation initiation factor IF-2 subunit beta
COORDINATES: protein motif:HMM:NF003792.0
GO:0003883 - CTP synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020449314.1
COORDINATES: protein motif:HMM:NF003106.0
COORDINATES: similar to AA sequence:RefSeq:WP_019177411.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015504224.1
translation elongation factor EF-1 subunit alpha
COORDINATES: protein motif:HMM:TIGR01046.1
COORDINATES: protein motif:HMM:NF002068.0
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013939.2
COORDINATES: protein motif:HMM:TIGR00033.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176716.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF002436.0
COORDINATES: similar to AA sequence:RefSeq:WP_019177392.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009399 - nitrogen fixation [Evidence IEA]
nitrogenase cofactor biosynthesis protein NifB
COORDINATES: protein motif:HMM:NF014002.2
COORDINATES: nucleotide motif:Rfam:14.4:RF02540
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00501.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177377.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177376.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177375.1
COORDINATES: protein motif:HMM:NF001988.0
COORDINATES: similar to AA sequence:RefSeq:WP_019177373.1
COORDINATES: protein motif:HMM:NF037134.2
COORDINATES: protein motif:HMM:NF013125.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177325.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177326.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177327.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177328.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF040157.1
COORDINATES: protein motif:HMM:NF024319.2
COORDINATES: protein motif:HMM:NF013380.2
COORDINATES: protein motif:HMM:TIGR00414.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014087.2
COORDINATES: protein motif:HMM:NF015965.2
COORDINATES: similar to AA sequence:RefSeq:WP_020449176.1
COORDINATES: protein motif:HMM:TIGR00322.1
GO:0043364 - glycyl-radical enzyme activating activity [Evidence IEA]
GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177313.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177312.1
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177311.1
COORDINATES: protein motif:HMM:NF012425.2
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176627.1
glyoxalase/bleomycin resistance/dioxygenase family protein
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176749.1
conserved protein with predicted RNA-binding PUA domain
COORDINATES: protein motif:HMM:NF039904.1
COORDINATES: similar to AA sequence:RefSeq:WP_018035149.1
COORDINATES: protein motif:HMM:NF004889.0
COORDINATES: similar to AA sequence:RefSeq:WP_015505221.1
COORDINATES: protein motif:HMM:TIGR00024.1
COORDINATES: protein motif:HMM:NF014342.2
COORDINATES: protein motif:HMM:NF016535.2
COORDINATES: protein motif:HMM:NF014430.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176758.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: protein motif:HMM:NF014635.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176771.1
coenzyme-B sulfoethylthiotransferase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_019176772.1
methyl-coenzyme M reductase operon protein D
COORDINATES: similar to AA sequence:RefSeq:WP_019176773.1
coenzyme-B sulfoethylthiotransferase subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_019176774.1
coenzyme-B sulfoethylthiotransferase subunit alpha
COORDINATES: protein motif:HMM:NF021397.2
COORDINATES: protein motif:HMM:TIGR03266.1
YcaO-related McrA-glycine thioamidation protein
COORDINATES: protein motif:HMM:NF040019.1
COORDINATES: protein motif:HMM:NF021410.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176782.1
methyl coenzyme M reductase system, component A2
COORDINATES: similar to AA sequence:RefSeq:WP_019176783.1
methyl-coenzyme M reductase I operon protein C
COORDINATES: protein motif:HMM:TIGR03268.1
COORDINATES: protein motif:HMM:NF021401.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176787.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176788.1
COORDINATES: protein motif:HMM:NF021412.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176790.1
methyl-coenzyme M reductase family protein
COORDINATES: protein motif:HMM:NF014088.2
COORDINATES: protein motif:HMM:NF014910.2
COORDINATES: similar to AA sequence:RefSeq:WP_015504312.1
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF025054.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015504310.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177906.1
uroporphyrinogen decarboxylase family protein
COORDINATES: protein motif:HMM:NF014375.2
GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog.; Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00373
archaeal type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:NF024571.2
COORDINATES: protein motif:HMM:TIGR03910.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015504323.1
COORDINATES: protein motif:HMM:NF013089.2
COORDINATES: similar to AA sequence:RefSeq:WP_015504321.1
COORDINATES: protein motif:HMM:NF013381.2
COORDINATES: protein motif:HMM:NF012407.2
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_019176817.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178518.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176823.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176824.1
transcription elongation factor subunit Spt4
COORDINATES: protein motif:HMM:NF015952.2
GO:0016301 - kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013450.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176827.1
COORDINATES: protein motif:HMM:NF037100.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF024550.2
COORDINATES: protein motif:HMM:NF024080.2
COORDINATES: similar to AA sequence:RefSeq:WP_015504342.1
COORDINATES: similar to AA sequence:RefSeq:WP_015504340.1
putative DNA binding domain-containing protein
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: protein motif:HMM:NF013555.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
topoisomerase DNA-binding C4 zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF025124.2
COORDINATES: protein motif:HMM:NF019474.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176840.1
aconitase X catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF013213.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF013094.2
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:TIGR00392.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03674.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176846.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_018036418.1
COORDINATES: protein motif:HMM:NF000801.0
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: protein motif:HMM:NF014050.2
COORDINATES: similar to AA sequence:RefSeq:WP_015504367.1
COORDINATES: protein motif:HMM:TIGR01060.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003372.0
COORDINATES: protein motif:HMM:NF013811.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176478.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176482.1
GO:0017061 - S-methyl-5-thioadenosine phosphorylase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: protein motif:HMM:NF004981.0
histidinol phosphate phosphatase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176489.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: similar to AA sequence:RefSeq:WP_019176490.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_019176491.1
regulator of amino acid metabolism, contains ACT domain protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176503.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00070.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176494.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01855.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: protein motif:HMM:NF013168.2
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_019176516.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019176517.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:TIGR00111.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176519.1
GO:0004410 - homocitrate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176511.1
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
COORDINATES: protein motif:HMM:NF014064.2
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01920.1
GO:0004765 - shikimate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01356.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF012998.2
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
prephenate dehydratase domain-containing protein
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176531.1
COORDINATES: protein motif:HMM:NF016831.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177907.1
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF024639.2
COORDINATES: similar to AA sequence:RefSeq:WP_015504007.1
COORDINATES: protein motif:HMM:TIGR01179.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00031.1
GO:0008767 - UDP-galactopyranose mutase activity [Evidence IEA]
GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF025469.2
COORDINATES: protein motif:HMM:NF013234.2
COORDINATES: protein motif:HMM:NF014409.2
acylneuraminate cytidylyltransferase family protein
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: protein motif:HMM:NF015087.2
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
N-acetylneuraminate synthase family protein
COORDINATES: protein motif:HMM:NF039710.1
COORDINATES: protein motif:HMM:NF013652.2
COORDINATES: protein motif:HMM:NF012977.2
GO:0008373 - sialyltransferase activity [Evidence IEA]
GO:0006486 - protein glycosylation [Evidence IEA]
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF021028.2
COORDINATES: protein motif:HMM:NF024700.2
COORDINATES: protein motif:HMM:NF008277.0
COORDINATES: protein motif:HMM:NF016932.2
COORDINATES: similar to AA sequence:RefSeq:WP_015505172.1
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: protein motif:HMM:NF013607.2
low molecular weight protein-tyrosine-phosphatase
COORDINATES: protein motif:HMM:NF006757.0
GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF015909.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176547.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176548.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176549.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176550.1
Zn-ribbon domain-containing OB-fold protein
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF011465.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176554.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0006566 - threonine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176555.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014299.2
COORDINATES: protein motif:HMM:NF012492.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176558.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176559.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinamide-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:NF014517.2
COORDINATES: similar to AA sequence:RefSeq:WP_015504465.1
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF015631.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176594.1
NAD(P)-dependent glycerol-1-phosphate dehydrogenase
COORDINATES: protein motif:HMM:TIGR00332.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177310.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177309.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019177308.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019177307.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177424.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
tRNA guanosine(15) transglycosylase TgtA
COORDINATES: similar to AA sequence:RefSeq:WP_019177417.1
COORDINATES: protein motif:HMM:TIGR00283.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014622.2
COORDINATES: protein motif:HMM:TIGR02351.2
GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017501.2
COORDINATES: protein motif:HMM:NF006395.0
sulfur carrier protein ThiS adenylyltransferase ThiF
COORDINATES: protein motif:HMM:TIGR00693.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177201.1
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012478.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: protein motif:HMM:TIGR00097.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_019178666.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: protein motif:HMM:TIGR00838.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177290.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177289.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_019177288.1
GO:0004042 - acetyl-CoA:L-glutamate N-acetyltransferase activity [Evidence IEA]; GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
COORDINATES: protein motif:HMM:NF012899.2
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002325.0
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177282.1
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: protein motif:HMM:NF024212.2
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF006929.0
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00566.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:NF012640.2
anthranilate synthase component I family protein
COORDINATES: protein motif:HMM:NF013247.2
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF039826.1
radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:TIGR00004.1
GO:0019239 - deaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01001.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178685.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01297.1
cation diffusion facilitator family transporter
COORDINATES: similar to AA sequence:RefSeq:WP_019177264.1
ribosome biogenesis/translation initiation ATPase RLI
COORDINATES: protein motif:HMM:NF015382.2
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177263.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF033559.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024747.2
4Fe-4S single cluster domain-containing protein
COORDINATES: protein motif:HMM:NF019344.2
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019984.2
group II intron maturase-specific domain-containing protein
COORDINATES: protein motif:HMM:NF019403.2
heparan-alpha-glucosaminide N-acetyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: protein motif:HMM:NF024733.2
GO:0030163 - protein catabolic process [Evidence IEA]
BREX system Lon protease-like protein BrxL
COORDINATES: protein motif:HMM:NF033445.1
COORDINATES: protein motif:HMM:NF013658.2
GO:0003824 - catalytic activity [Evidence IEA]
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: similar to AA sequence:RefSeq:WP_015505448.1
viperin family antiviral radical SAM protein
COORDINATES: protein motif:HMM:NF017116.2
COORDINATES: protein motif:HMM:TIGR01909.1
COORDINATES: protein motif:HMM:NF024086.2
COORDINATES: protein motif:HMM:NF024486.2
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177788.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177787.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177785.1
COORDINATES: protein motif:HMM:NF025033.2
COORDINATES: protein motif:HMM:TIGR00587.1
COORDINATES: protein motif:HMM:NF004397.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF005932.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178304.1
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: protein motif:HMM:NF000796.0
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019177150.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: protein motif:HMM:NF012905.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF014774.2
COORDINATES: protein motif:HMM:NF025892.2
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01280.1
COORDINATES: protein motif:HMM:NF025844.2
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:NF014443.2
COORDINATES: protein motif:HMM:NF014325.2
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176957.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003921.0
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177074.1
COORDINATES: protein motif:HMM:NF014427.2
COORDINATES: protein motif:HMM:NF012307.2
reverse transcriptase domain-containing protein
COORDINATES: protein motif:HMM:NF021349.2
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:NF023335.2
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: protein motif:HMM:NF012481.2
COORDINATES: protein motif:HMM:NF037677.2
COORDINATES: similar to AA sequence:RefSeq:WP_015504897.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178031.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178575.1
COORDINATES: protein motif:HMM:NF012922.2
COORDINATES: protein motif:HMM:NF013412.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177003.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: protein motif:HMM:NF015987.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013958.2
COORDINATES: protein motif:HMM:TIGR03844.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03845.1
sulfopyruvate decarboxylase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_019177007.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177011.1
signal recognition particle protein Srp54
COORDINATES: similar to AA sequence:RefSeq:WP_019177012.1
tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY
COORDINATES: protein motif:HMM:NF021415.2
DUF2116 family Zn-ribbon domain-containing protein
COORDINATES: protein motif:HMM:TIGR00258.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0046128 - purine ribonucleoside metabolic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit beta/FixA family protein
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:TIGR00471.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177038.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase (NADPH)
COORDINATES: similar to AA sequence:RefSeq:WP_019176910.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176911.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176912.1
COORDINATES: similar to AA sequence:RefSeq:WP_015504686.1
COORDINATES: protein motif:HMM:TIGR00323.1
COORDINATES: protein motif:HMM:NF033550.5
COORDINATES: protein motif:HMM:NF016048.2
COORDINATES: protein motif:HMM:NF014075.2
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176932.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01857
archaeal-type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF024183.2
COORDINATES: protein motif:HMM:NF003229.0
COORDINATES: similar to AA sequence:RefSeq:WP_019176874.1
COORDINATES: protein motif:HMM:NF018644.2
COORDINATES: protein motif:HMM:NF024135.2
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021202.2
COORDINATES: protein motif:HMM:NF025669.2
COORDINATES: protein motif:HMM:NF014043.2
COORDINATES: protein motif:HMM:NF014021.2
COORDINATES: protein motif:HMM:TIGR01550.1
COORDINATES: protein motif:HMM:NF019313.2
COORDINATES: protein motif:HMM:TIGR00210.1
GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013350.2
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: protein motif:HMM:NF003215.0
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: protein motif:HMM:NF013885.2
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF005491.0
GO:0008478 - pyridoxal kinase activity [Evidence IEA]
GO:0009443 - pyridoxal 5'-phosphate salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00036.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: protein motif:HMM:TIGR03904.1
COORDINATES: protein motif:HMM:TIGR04088.1
SipW-dependent-type signal peptide-containing protein
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:NF013314.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF016178.2
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF014316.2
COORDINATES: protein motif:HMM:NF014135.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177067.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177068.1
COORDINATES: protein motif:HMM:NF024257.2
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176528.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:NF014010.2
COORDINATES: protein motif:HMM:TIGR01573.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:NF013984.2
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
type V CRISPR-associated endonuclease Cas1
COORDINATES: protein motif:HMM:TIGR04328.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04330.1
type V CRISPR-associated protein Cas12a/Cpf1
COORDINATES: similar to AA sequence:RefSeq:WP_019177071.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: protein motif:HMM:NF015126.2
COORDINATES: protein motif:HMM:NF040320.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178136.1
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF012652.2
type II/IV secretion system ATPase subunit
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:TIGR02504.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: protein motif:HMM:NF012452.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176875.1
COORDINATES: protein motif:HMM:TIGR00421.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176906.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012511.2
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015492933.1
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: protein motif:HMM:NF001377.0
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012345.2
COORDINATES: protein motif:HMM:TIGR01978.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:TIGR01994.1
GO:0005198 - structural molecule activity [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: protein motif:HMM:TIGR01980.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176900.1
indolepyruvate oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_019176899.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF021128.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176361.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
methylamine methyltransferase corrinoid protein reductive activase
COORDINATES: similar to AA sequence:RefSeq:WP_019177725.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178088.1
COORDINATES: protein motif:HMM:NF013237.2
PLP-dependent aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR01136.1
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:TIGR00835.1
alanine/glycine:cation symporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176668.1
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF010713.0
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_019176868.1
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: protein motif:HMM:NF016874.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177052.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177039.1
COORDINATES: protein motif:HMM:NF013340.2
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF014839.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177215.1
COORDINATES: protein motif:HMM:NF001989.1
COORDINATES: protein motif:HMM:NF003108.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177097.1
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177101.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014057.2
COORDINATES: protein motif:HMM:NF014089.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177105.1
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013987.2
COORDINATES: protein motif:HMM:NF006878.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177113.1
dihydroneopterin aldolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177114.1
COORDINATES: protein motif:HMM:NF014103.2
tRNA (guanine(26)-N(2))-dimethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019177117.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024645.2
COORDINATES: protein motif:HMM:TIGR00148.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF013259.2
COORDINATES: protein motif:HMM:NF003169.0
COORDINATES: protein motif:HMM:NF015956.2
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF019413.2
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_015504651.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177251.1
COORDINATES: protein motif:HMM:TIGR00506.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_019177254.1
adenylyltransferase/cytidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177255.1
GO:0004746 - riboflavin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177256.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020916.2
polyphosphate polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: protein motif:HMM:NF027640.2
COORDINATES: protein motif:HMM:NF020337.2
COORDINATES: protein motif:HMM:NF014442.2
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF037510.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF013397.2
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177258.1
COORDINATES: protein motif:HMM:NF010367.0
COORDINATES: similar to AA sequence:RefSeq:WP_019177135.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177250.1
COORDINATES: protein motif:HMM:TIGR02928.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178125.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177244.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176194.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024081.2
FeoB-associated Cys-rich membrane protein
COORDINATES: protein motif:HMM:TIGR01512.1
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: protein motif:HMM:NF040097.1
COORDINATES: protein motif:HMM:NF013212.2
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018435.2
COORDINATES: protein motif:HMM:TIGR00093.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF017536.2
COORDINATES: similar to AA sequence:RefSeq:WP_018039292.1
COORDINATES: protein motif:HMM:NF021471.2
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:NF014304.2
COORDINATES: protein motif:HMM:NF024637.2
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176888.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177165.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177167.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177171.1
COORDINATES: similar to AA sequence:RefSeq:WP_015504970.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177173.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177186.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177046.1
COORDINATES: similar to AA sequence:RefSeq:WP_015504979.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177224.1
COORDINATES: protein motif:HMM:TIGR00011.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]
GO:0043039 - tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF010184.0
COORDINATES: protein motif:HMM:NF024363.2
COORDINATES: similar to AA sequence:RefSeq:WP_015505330.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177032.1
COORDINATES: protein motif:HMM:NF040105.1
COORDINATES: protein motif:HMM:NF024909.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176312.1
COORDINATES: protein motif:HMM:TIGR03911.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
3-methylornithyl-N6-L-lysine dehydrogenase PylD
COORDINATES: similar to AA sequence:RefSeq:WP_019176310.1
COORDINATES: protein motif:HMM:TIGR02367.1
GO:0043767 - pyrrolysyl-tRNA synthetase activity [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
pyrrolysine--tRNA(Pyl) ligase large subunit
COORDINATES: protein motif:HMM:NF017207.2
GO:0008168 - methyltransferase activity [Evidence IEA]
monomethylamine:corrinoid methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015505015.1
methyltransferase cognate corrinoid protein
COORDINATES: protein motif:HMM:NF018012.2
[trimethylamine--corrinoid protein] Co-methyltransferase
COORDINATES: protein motif:HMM:NF021053.2
[dimethylamine--corrinoid protein] Co-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019178525.1
COORDINATES: protein motif:HMM:NF002600.0
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ubiquinone/menaquinone biosynthesis methyltransferase
COORDINATES: protein motif:HMM:TIGR00751.1
GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
1,4-dihydroxy-2-naphthoate octaprenyltransferase
COORDINATES: protein motif:HMM:NF038196.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF020476.2
COORDINATES: protein motif:HMM:TIGR00589.1
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177228.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013334.2
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:TIGR01499.1
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: protein motif:HMM:NF001884.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0010045 - response to nickel cation [Evidence IEA]
nickel-responsive transcriptional regulator NikR
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: protein motif:HMM:NF005555.0
COORDINATES: protein motif:HMM:NF024214.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF014685.2
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF038002.1
bifunctional adenosylcobinamide hydrolase/alpha-ribazole phosphatase CbiS
COORDINATES: protein motif:HMM:TIGR00380.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: protein motif:HMM:NF012375.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176464.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176462.1
GO:0004164 - diphthine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177121.1
COORDINATES: protein motif:HMM:NF013219.2
iron chelate uptake ABC transporter family permease subunit
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF013671.2
iron-sulfur cluster biosynthesis family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019176428.1
COORDINATES: protein motif:HMM:NF020968.2
COORDINATES: protein motif:HMM:NF025040.2
GO:0046983 - protein dimerization activity [Evidence IEA]
RpoL/Rpb11 RNA polymerase subunit family protein
COORDINATES: protein motif:HMM:NF013322.2
GO:0031119 - tRNA pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF038245.1
COORDINATES: similar to AA sequence:RefSeq:WP_015505125.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:TIGR01166.1
COORDINATES: protein motif:HMM:NF006184.0
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0000041 - transition metal ion transport [Evidence IEA]
energy-coupling factor ABC transporter permease
COORDINATES: protein motif:HMM:NF015951.2
COORDINATES: protein motif:HMM:NF037142.2
COORDINATES: similar to AA sequence:RefSeq:WP_019176409.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176408.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: protein motif:HMM:NF014049.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177571.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177572.1
transketolase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177573.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177574.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:NF013776.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177575.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014273.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177022.1
dockerin type I repeat-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177029.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177023.1
COORDINATES: similar to AA sequence:RefSeq:WP_015492688.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177584.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178233.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177036.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177037.1
COORDINATES: protein motif:HMM:TIGR01466.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012799.2
cobalt-precorrin-4/precorrin-4 C(11)-methyltransferase
COORDINATES: protein motif:HMM:TIGR01467.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177020.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177025.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177034.1
GO:0051116 - cobaltochelatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02257.1
COORDINATES: similar to AA sequence:RefSeq:WP_015505072.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177033.1
COORDINATES: protein motif:HMM:TIGR00418.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177586.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006762.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF000818.0
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:TIGR00212.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019176692.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF014641.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177587.1
COORDINATES: protein motif:HMM:NF002211.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: similar to AA sequence:RefSeq:WP_019177591.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177592.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177598.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF002318.0
preprotein translocase subunit Sec61beta
COORDINATES: protein motif:HMM:NF020334.2
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: protein motif:HMM:TIGR00379.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014613.2
bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: protein motif:HMM:TIGR00312.2
cobalt-precorrin-5B (C(1))-methyltransferase CbiD
COORDINATES: protein motif:HMM:NF014016.2
GO:0016829 - lyase activity [Evidence IEA]
CbiX/SirB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF010587.0
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_015504440.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF019623.2
PD-(D/E)XK nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177066.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: protein motif:HMM:TIGR03282.1
Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit
COORDINATES: protein motif:HMM:NF033197.0
COORDINATES: similar to AA sequence:RefSeq:WP_015505200.1
COORDINATES: similar to AA sequence:RefSeq:WP_015505199.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012369.2
COORDINATES: similar to AA sequence:RefSeq:WP_015505210.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177643.1
GO:0004412 - homoserine dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177644.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001220.0
COORDINATES: similar to AA sequence:RefSeq:WP_015492762.1
COORDINATES: similar to AA sequence:RefSeq:WP_015505203.1
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: protein motif:HMM:TIGR02121.1
GO:0005298 - proline:sodium symporter activity [Evidence IEA]
GO:0015824 - proline transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012753.2
COORDINATES: protein motif:HMM:NF003555.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021622.2
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: similar to AA sequence:RefSeq:WP_015504283.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177442.1
methylthiol--coenzyme M methyltransferase
COORDINATES: protein motif:HMM:TIGR04270.1
COORDINATES: protein motif:HMM:TIGR01513.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016513.2
COORDINATES: protein motif:HMM:NF024093.2
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177701.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003214.0
COORDINATES: similar to AA sequence:RefSeq:WP_019177702.1
Enables 3` processing of polyadenylated mRNAs and tRNA precursors; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00857.1
COORDINATES: protein motif:HMM:TIGR00296.1
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177709.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177711.1
CoB--CoM heterodisulfide reductase subunit B
COORDINATES: protein motif:HMM:TIGR03290.1
CoB--CoM heterodisulfide reductase subunit C
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: protein motif:HMM:TIGR00072.1
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF021287.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177718.1
pyruvoyl-dependent arginine decarboxylase
COORDINATES: similar to AA sequence:RefSeq:WP_019177722.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177724.1
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177734.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177061.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
TrkA C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013895.2
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177740.1
formate--phosphoribosylaminoimidazolecarboxamide ligase family protein
COORDINATES: protein motif:HMM:NF039182.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177743.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177744.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177745.1
COORDINATES: protein motif:HMM:NF016312.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019177750.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015505269.1
COORDINATES: protein motif:HMM:TIGR00425.1
RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
COORDINATES: protein motif:HMM:NF014061.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177507.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177508.1
COORDINATES: protein motif:HMM:NF004711.0
COORDINATES: similar to AA sequence:RefSeq:WP_020448359.1
COORDINATES: similar to AA sequence:RefSeq:WP_015492814.1
COORDINATES: similar to AA sequence:RefSeq:WP_015492815.1
COORDINATES: protein motif:HMM:NF006332.0
COORDINATES: similar to AA sequence:RefSeq:WP_019177514.1
COORDINATES: similar to AA sequence:RefSeq:WP_015505283.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177516.1
COORDINATES: similar to AA sequence:RefSeq:WP_020448352.1
COORDINATES: protein motif:HMM:NF003312.0
COORDINATES: similar to AA sequence:RefSeq:WP_015505287.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020448349.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177521.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177522.1
COORDINATES: similar to AA sequence:RefSeq:WP_015492826.1
stress response translation initiation inhibitor YciH
COORDINATES: similar to AA sequence:RefSeq:WP_019177524.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020448344.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177526.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177527.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177528.1
COORDINATES: similar to AA sequence:RefSeq:WP_015505296.1
COORDINATES: similar to AA sequence:RefSeq:WP_015505297.1
COORDINATES: similar to AA sequence:RefSeq:WP_020448338.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177534.1
COORDINATES: protein motif:HMM:TIGR01210.1
archaeosine biosynthesis radical SAM protein RaSEA
COORDINATES: similar to AA sequence:RefSeq:WP_019177537.1
COORDINATES: protein motif:HMM:NF026161.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177554.1
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00729.1
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014132.2
SCP2 sterol-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177271.1
COORDINATES: protein motif:HMM:TIGR00836.1
COORDINATES: protein motif:HMM:NF021561.2
COORDINATES: protein motif:HMM:TIGR00135.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_019177560.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177561.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_019177562.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177563.1
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF039496.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177567.1
nascent polypeptide-associated complex protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177568.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:NF040647.1
COORDINATES: similar to AA sequence:RefSeq:WP_019176397.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_015505322.1
COORDINATES: protein motif:HMM:NF020014.2
DNA repair and recombination protein RadB
COORDINATES: protein motif:HMM:TIGR03724.2
COORDINATES: protein motif:HMM:TIGR00042.1
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_015504994.1
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178421.1
COORDINATES: protein motif:HMM:NF024835.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00711.1
COORDINATES: protein motif:HMM:NF005559.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_019177767.1
COORDINATES: similar to AA sequence:RefSeq:WP_015505346.1
COORDINATES: similar to AA sequence:RefSeq:WP_020449483.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177764.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177759.1
COORDINATES: protein motif:HMM:TIGR01496.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177852.1
heterodisulfide reductase-related iron-sulfur binding cluster
COORDINATES: similar to AA sequence:RefSeq:WP_019177853.1
GO:0050043 - lactate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01379.1
GO:0009030 - thiamine-phosphate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04337.1
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015505368.1
COORDINATES: protein motif:HMM:NF012904.2
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF013293.2
COORDINATES: protein motif:HMM:TIGR00657.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177874.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177875.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177876.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177877.1
GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177881.1
type II glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_015505386.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015505382.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177885.1
COORDINATES: protein motif:HMM:NF016050.2
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF013698.2
COORDINATES: similar to AA sequence:RefSeq:WP_019177895.1
COORDINATES: protein motif:HMM:NF014058.2
COORDINATES: protein motif:HMM:NF012760.2
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177944.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177945.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177946.1
COORDINATES: protein motif:HMM:TIGR01213.2
tRNA pseudouridine(54/55) synthase Pus10
COORDINATES: similar to AA sequence:RefSeq:WP_019177954.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177956.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177958.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_019177961.1
COORDINATES: protein motif:HMM:NF012364.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
DNA polymerase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019177964.1
COORDINATES: protein motif:HMM:NF013784.2
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014923.2
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015505418.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_015505417.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177984.1
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: protein motif:HMM:NF012673.2
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177994.1
fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_020448201.1
COORDINATES: similar to AA sequence:RefSeq:WP_019177998.1
bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase
winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:TIGR01027.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019177916.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF025027.2
COORDINATES: protein motif:HMM:NF038283.1
COORDINATES: protein motif:HMM:NF014019.2
COORDINATES: protein motif:HMM:NF022338.2
COORDINATES: protein motif:HMM:TIGR03718.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
TerC/Alx family metal homeostasis membrane protein
COORDINATES: protein motif:HMM:NF022182.2
COORDINATES: protein motif:HMM:NF008035.0
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178758.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178756.1
COORDINATES: protein motif:HMM:NF008730.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012348.2
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024813.2
COORDINATES: protein motif:HMM:NF002634.0
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178196.1
hydrogenase expression/formation protein HypE
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: protein motif:HMM:NF041120.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178257.1
COORDINATES: protein motif:HMM:NF024702.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178259.1
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014066.2
COORDINATES: protein motif:HMM:NF014543.2
COORDINATES: protein motif:HMM:NF039705.1
COORDINATES: protein motif:HMM:NF011529.0
COORDINATES: similar to AA sequence:RefSeq:WP_019178269.1
Glu-tRNA(Gln) amidotransferase subunit GatE
COORDINATES: similar to AA sequence:RefSeq:WP_019178270.1
Glu-tRNA(Gln) amidotransferase subunit GatD
COORDINATES: similar to AA sequence:RefSeq:WP_019178273.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: similar to AA sequence:RefSeq:WP_019178274.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013575.2
COORDINATES: protein motif:HMM:NF025006.2
COORDINATES: protein motif:HMM:NF010386.0
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178281.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178282.1
NusA-like transcription termination signal-binding factor
COORDINATES: similar to AA sequence:RefSeq:WP_019178283.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178284.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178285.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178286.1
COORDINATES: protein motif:HMM:NF007129.0
COORDINATES: protein motif:HMM:TIGR01243.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178580.1
GO:0016407 - acetyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
COORDINATES: similar to AA sequence:RefSeq:WP_019178578.1
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178573.1
COORDINATES: protein motif:HMM:NF012314.2
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178564.1
catalyzes the S-adenosyl-methionine-dependent 2'-O-ribose methylation of C56 in tRNA transcripts; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019178563.1
COORDINATES: similar to AA sequence:RefSeq:WP_015493020.1
COORDINATES: protein motif:HMM:NF020083.2
COORDINATES: similar to AA sequence:RefSeq:WP_019178455.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178453.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:NF016305.2
COORDINATES: protein motif:HMM:TIGR01063.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF004189.0
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_019178435.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178426.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178425.1
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019178423.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
FumA C-terminus/TtdB family hydratase beta subunit
COORDINATES: similar to AA sequence:RefSeq:WP_019178422.1
COORDINATES: protein motif:HMM:NF016842.2
COORDINATES: protein motif:HMM:NF016157.2
COORDINATES: protein motif:HMM:NF012704.2
COORDINATES: protein motif:HMM:NF002621.0
COORDINATES: similar to AA sequence:RefSeq:WP_019178404.1
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019178402.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178305.1
COORDINATES: protein motif:HMM:TIGR00335.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF013900.2
COORDINATES: protein motif:HMM:TIGR00293.1
COORDINATES: similar to AA sequence:RefSeq:WP_019178395.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:NF010589.0
COORDINATES: similar to AA sequence:RefSeq:WP_019178390.1
COORDINATES: protein motif:HMM:NF020078.2