Candidatus Pantoea carbekii strain US plasmid pBMSBPS3, complete sequence.
type: Entry
definition: Candidatus Pantoea carbekii strain US plasmid pBMSBPS3, complete sequence.
sequence version: NZ_CP010910.1
sequence date: 2022-12-13
sequence: sequence
division: CON
label: NZ_CP010910.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN03371649
keyword: RefSeq
source: Candidatus Pantoea carbekii (primary bacterial symbiont of Brown Marmorated Stink Bug)
organism: Candidatus Pantoea carbekii
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea.
reference: 1
references: 25587021
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP010910.1.\nSource DNA is available from Zakee L. Sabree, sabree.8@osu.edu,\nDepartment of Evolution, Ecology and Organismal Biology, The Ohio\nState University, 318 W. 12th. Avenue Room 300, Columbus, Ohio,\nUSA.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: BWA v. 0.6.1\nGenome Coverage :: 1,412X\nSequencing Technology :: Sanger dideoxy sequencing; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/12/2022 20:12:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 879\nCDSs (total) :: 829\nGenes (coding) :: 802\nCDSs (with protein) :: 802\nGenes (RNA) :: 50\nrRNAs :: 2, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 3, 3 (5S, 16S, 23S)\ntRNAs :: 39\nncRNAs :: 3\nPseudo Genes (total) :: 27\nCDSs (without protein) :: 27\nPseudo Genes (ambiguous residues) :: 0 of 27\nPseudo Genes (frameshifted) :: 9 of 27\nPseudo Genes (incomplete) :: 17 of 27\nPseudo Genes (internal stop) :: 11 of 27\nPseudo Genes (multiple problems) :: 9 of 27\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 17880
topology: circular
so has quality: SO_0000988
location: 1..17880
location: region:1-17880:1
RO_0002162: 1235990

NZ_CP010910
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN03371649
type: BioSample
SIO_000068: biosample

1
title: Habitat visualization and genomic analysis of 'Candidatus Pantoea carbekii,' the primary symbiont of the brown marmorated stink bug
author: Kenyon, L.J.
author: Meulia, T.
author: Sabree, Z.L.
journal: Genome Biol Evol
volume: 7
issue: 2
pages: 620-635
year: 2015
pubmed: 25587021
comments: Publication Status: Online-Only

25587021
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Kenyon, L.J.
author: Meulia, T.
author: Sabree, Z.L.
journal: Submitted (02-FEB-2015) The Ohio State University, Evolution, Ecology, and Organismal Biology, 318 West 12th Avenue, Columbus, OH 43210, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17880:1
position: 17880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17880:1:source
so part of: sequence
organism: Candidatus Pantoea carbekii
mol type: genomic DNA
strain: US
isolation source: distal midgut region V4
host: Halyomorpha halys
plasmid: pBMSBPS3
country: USA: Ohio,Wooster
lat lon: 40.7793 N 81.9250 W
collection date: 2014-02
common: primary bacterial symbiont of Brown Marmorated Stink Bug

1235990
type: Taxonomy
SIO_000068: taxonomy

BMSBPS_RS04275
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
locus tag: BMSBPS_RS04275
old locus tag: BMSBPS_p0015
so part of: sequence
location: complement(11..964)
location: region:11-964:-1
so has part: feature:11-964:-1:exon
subclass of: SO_0000010

position:11:-1
position: 11
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964:-1
position: 964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11-964:-1:exon

BMSBPS_RS04275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
locus tag: BMSBPS_RS04275
old locus tag: BMSBPS_p0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014604568.1
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006270 - DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RepB family plasmid replication initiator protein
translation: MSYKGSENKVLFEPFLLVTKNNGEVIQLHPNKNNTVQPVALMRLGLFVPTLKSTARRKSGAMASMDATKELKNLSLVKAEGYERITITGARLDMDNDFKTWAGIIQSFSRYPLKNDSTVTLSFIEFVKMCGIPSAHSSAALRRRLDASLKRIVTNTLSFEGNGKAYHTHLVQSAYYDREKDLVCIQADPKLFELYNFDHKVLLQLRAISRLKRKESAQALYTYLESLPTNPAPISLARLRMRLNLGSQTTTQNYVARRAMEQLKEIGYLHYSEVRRGRSVFFIIHSRMPKLGRMPKLDSISKLADGIYTVEGFDFED
SIO_010081: BMSBPS_RS04275
subclass of: SO_0000673
so part of: BMSBPS_RS04275
location: complement(11..964)
location: region:11-964:-1
so has part: feature:11-964:-1:exon

WP_046201237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11-964:-1:exon

BMSBPS_RS04280
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
locus tag: BMSBPS_RS04280
old locus tag: BMSBPS_p0016
so part of: sequence
location: complement(2292..3272)
location: region:2292-3272:-1
so has part: feature:2292-3272:-1:exon
subclass of: SO_0000010

position:2292:-1
position: 2292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272:-1
position: 3272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2292-3272:-1:exon

BMSBPS_RS04280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
locus tag: BMSBPS_RS04280
old locus tag: BMSBPS_p0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010247479.1
GO function: GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ThiF family adenylyltransferase
translation: MKRYEPQIILPEVGYVGQKILQQSRVLVVGAGGLSATLLPQLIGSGIGYVRLYDNDNVALNNLHRQTLFTERDVGYAKVVSAQKILEQQNPQVRVEILQEMLNVSNVKSALIDIDLVVDSADNFDVTYLLSDICSINAVPFISASVVGRQGYVGGFCGIAPGYCTVFPRSSTVCFSNNCSTVGVMGPVVAVLGAIQAQMVISVLLGLLPSPLGCIVNCDFVNWHFYRFRFYGLDESSDQKSIPFIDLQSLADDDWIVELRSFEEAPVSIAECVERVSLQQLPFWQPPTMDRRIVLVCASGMRASQAGILLMQRGFNSLAILAANRL
SIO_010081: BMSBPS_RS04280
subclass of: SO_0000673
so part of: BMSBPS_RS04280
location: complement(2292..3272)
location: region:2292-3272:-1
so has part: feature:2292-3272:-1:exon

WP_046201238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2292-3272:-1:exon

BMSBPS_RS04285
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
locus tag: BMSBPS_RS04285
old locus tag: BMSBPS_p0017
so part of: sequence
location: complement(3291..4052)
location: region:3291-4052:-1
so has part: feature:3291-4052:-1:exon
subclass of: SO_0000010

position:3291:-1
position: 3291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4052:-1
position: 4052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3291-4052:-1:exon

BMSBPS_RS04285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
locus tag: BMSBPS_RS04285
old locus tag: BMSBPS_p0017
EC number: 2.8.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019105884.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiazole synthase
translation: MFYGTEIKSRFLLGTAGYPSPSILQMAINASGAQIITVSLRREGGDCGRVFRDMLNTLNIHILPNTAGCHTVKEAVTTAHMARELFNTLWIKLELIGHPDTLQPDPFALIEAARILSEEGFQIFPYTTEDLIIGEKLLAAGCKLLMPWGSPIGSAQGLRNIDSLRTMRAYFHGIPLIIDAGIGAPSQAAQAMEMGFDGVLLNTAVAKSGNPILMANAFCRAIKAGHIAYQAGLIEKRDMAIASTPIFGLANFI
SIO_010081: BMSBPS_RS04285
subclass of: SO_0000673
so part of: BMSBPS_RS04285
location: complement(3291..4052)
location: region:3291-4052:-1
so has part: feature:3291-4052:-1:exon

WP_046201245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3291-4052:-1:exon

BMSBPS_RS04290
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
gene: thiS
locus tag: BMSBPS_RS04290
old locus tag: BMSBPS_p0018
so part of: sequence
location: complement(4056..4253)
location: region:4056-4253:-1
so has part: feature:4056-4253:-1:exon
subclass of: SO_0000010

position:4056:-1
position: 4056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253:-1
position: 4253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4056-4253:-1:exon

BMSBPS_RS04290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
gene: thiS
locus tag: BMSBPS_RS04290
old locus tag: BMSBPS_p0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014598218.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfur carrier protein ThiS
translation: MKIQVNGKHIVTQANNLSELFYEQQIDITCIATAFNGVFVPKNQYDSQCLEEGCRLEVLSPMQGG
SIO_010081: BMSBPS_RS04290
subclass of: SO_0000673
so part of: BMSBPS_RS04290
location: complement(4056..4253)
location: region:4056-4253:-1
so has part: feature:4056-4253:-1:exon

WP_046201239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4056-4253:-1:exon

BMSBPS_RS04295
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
locus tag: BMSBPS_RS04295
old locus tag: BMSBPS_p0019
so part of: sequence
location: complement(4237..5181)
location: region:4237-5181:-1
so has part: feature:4237-5181:-1:exon
subclass of: SO_0000010

position:4237:-1
position: 4237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5181:-1
position: 5181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4237-5181:-1:exon

BMSBPS_RS04295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
locus tag: BMSBPS_RS04295
old locus tag: BMSBPS_p0019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008924753.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MSSWTVLGGGVVGLCVATALMERGEEVEVIDDLTSRPASWFAGGMLAPFCESESSPSNIISLGEYSAKWWQKRVSSVEQRGTLVIAPARDTQELKRFARMTKKYQWVTPNELEPALEQRFTQGLFFSCEAHLNPRIALMEMREKLLQNGVVFHLHKPRGRIIDCCGIYAASQLSGLRGVRGEMLILKSNDVHFSRPIRLLHPRFPCYLVPRYDGYFMLGATMIESIDDSVISVRGMMELLSSAYVIHPALVEARIVESGSGLRPAYASNMPKISYKDGIFYLNGMYRHGFLLAPIMSEQLMQYLSGEKIYENSS
SIO_010081: BMSBPS_RS04295
subclass of: SO_0000673
so part of: BMSBPS_RS04295
location: complement(4237..5181)
location: region:4237-5181:-1
so has part: feature:4237-5181:-1:exon

WP_046201240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4237-5181:-1:exon

BMSBPS_RS04300
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
locus tag: BMSBPS_RS04300
old locus tag: BMSBPS_p0020
so part of: sequence
location: 6939..8168
location: region:6939-8168:1
so has part: feature:6939-8168:1:exon
subclass of: SO_0000010

position:6939:1
position: 6939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8168:1
position: 8168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6939-8168:1:exon

BMSBPS_RS04300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
locus tag: BMSBPS_RS04300
old locus tag: BMSBPS_p0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010618916.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MKLDNLSRRNFMTFAAASSTIFLTAAKIYSKKNKNIIQSSNIQNSCNPSSRDSVHAQLNPDLIDPPFTDSGTLPNLRFSFSDAHVRKGSGGWTRQITQRELGISTTIAGVNMRLQKGGIRELHWHKEAEWAYMLYGKGRITLLDSEGHWFISDLSVGDLWYFPSGIPHSIQGLDPDGCEFLLAFDDGNFDEDSTFLLSDWFKHIPPEVLAKNFNMPISIFNTLPSPENEYIFSGNEPNKMITEVAIGGKKSKLDFSYKMLAQKPFEMPGGTVRIVDSKNFLVSKTIAAALVELEPGAMRELHWHPNNDEWQYYLQGEGRMGVFAASGQARTFNFRGGDVGYVPFAMGHYIENTGNILLRFLELFKSDYYADISLKQWLANTPSNLVRQHLNLDESFLQSLQLQKYPIVK
SIO_010081: BMSBPS_RS04300
subclass of: SO_0000673
so part of: BMSBPS_RS04300
location: 6939..8168
location: region:6939-8168:1
so has part: feature:6939-8168:1:exon

WP_046201241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6939-8168:1:exon

BMSBPS_RS04590
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
locus tag: BMSBPS_RS04590
old locus tag: BMSBPS_p0021
so part of: sequence
location: 11754..11921
location: region:11754-11921:1
so has part: feature:11754-11921:1:exon
subclass of: SO_0000010

position:11754:1
position: 11754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11921:1
position: 11921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11754-11921:1:exon

BMSBPS_RS04590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
locus tag: BMSBPS_RS04590
old locus tag: BMSBPS_p0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006119054.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stress-induced protein
translation: MNECTNKASNFMENKHKSSDNDKKSSQHSSVNFKNEREKTSESGKKSGQNHNRNT
SIO_010081: BMSBPS_RS04590
subclass of: SO_0000673
so part of: BMSBPS_RS04590
location: 11754..11921
location: region:11754-11921:1
so has part: feature:11754-11921:1:exon

WP_102029183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11754-11921:1:exon

BMSBPS_RS04305
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
locus tag: BMSBPS_RS04305
old locus tag: BMSBPS_p0022
so part of: sequence
location: 12229..12744
location: region:12229-12744:1
so has part: feature:12229-12744:1:exon
subclass of: SO_0000010

position:12229:1
position: 12229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12744:1
position: 12744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12229-12744:1:exon

BMSBPS_RS04305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
locus tag: BMSBPS_RS04305
old locus tag: BMSBPS_p0022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013027125.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF892 family protein
translation: MSHSQALRHYHDWLKDAHAMEKQAETMLGKMADRLQHYHELKFRIQQHIIETRQQQNQLENILNRYNISHSSVKEVIGKMFAIGQAIAVSFAEDEIVKGTMSCYVFENAELASYTSLIAAATYVGDKESIPIFEQIFEQERVMSDWIFSHLPEITNKFLTLSDQQSIKAKL
SIO_010081: BMSBPS_RS04305
subclass of: SO_0000673
so part of: BMSBPS_RS04305
location: 12229..12744
location: region:12229-12744:1
so has part: feature:12229-12744:1:exon

WP_046201242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12229-12744:1:exon

BMSBPS_RS04310
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
gene: map
locus tag: BMSBPS_RS04310
old locus tag: BMSBPS_p0023
so part of: sequence
location: 13633..14415
location: region:13633-14415:1
so has part: feature:13633-14415:1:exon
subclass of: SO_0000010

position:13633:1
position: 13633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14415:1
position: 14415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13633-14415:1:exon

BMSBPS_RS04310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
gene: map
locus tag: BMSBPS_RS04310
old locus tag: BMSBPS_p0023
EC number: 3.4.11.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008106302.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MNIKLHTSKEIELARAAGKDAAEVLEIIASHIKPGITTQEIDRICNDYIVNTLKVIPANFGYHGYTHTVCTSVNHVVCHGIPNDKKLKDGDIINIDVGIIKNGWYGDTSRMYFVGQPSVRAKRLVDITYQSMLAGIRVVKPGRALGDIGNIIQKTAEQAGFSVVREYCGHGIGKVYHDTPQILHYGKPGMGIILKAGMIFTIEPMVNAGKPGTSVLSDGWTVITKDRSLSAQWEHTIAVTETGFDLLTPWPKGTGPYKSI
SIO_010081: BMSBPS_RS04310
subclass of: SO_0000673
so part of: BMSBPS_RS04310
location: 13633..14415
location: region:13633-14415:1
so has part: feature:13633-14415:1:exon

WP_046201243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13633-14415:1:exon

BMSBPS_RS04315
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
locus tag: BMSBPS_RS04315
old locus tag: BMSBPS_p0024
so part of: sequence
location: complement(14889..15284)
location: region:14889-15284:-1
so has part: feature:14889-15284:-1:exon
subclass of: SO_0000010

position:14889:-1
position: 14889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15284:-1
position: 15284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14889-15284:-1:exon

BMSBPS_RS04315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
locus tag: BMSBPS_RS04315
old locus tag: BMSBPS_p0024
inference: COORDINATES: protein motif:HMM:NF033674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NirD/YgiW/YdeI family stress tolerance protein
translation: MKKFIELSILLLLTSSFSLCAAEVALNTNNVIPINHKQHTGYKAKQHAKTTVKQFMTQKNNMWVTMQGNIIKKSGKNSYFFRDATGSTTLIIPKTVSHGKKYNAKDLLCVRGQVKIWGNKRVLYVKYVTTP
SIO_010081: BMSBPS_RS04315
subclass of: SO_0000673
so part of: BMSBPS_RS04315
location: complement(14889..15284)
location: region:14889-15284:-1
so has part: feature:14889-15284:-1:exon

WP_052719894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14889-15284:-1:exon

BMSBPS_RS04320
type: Gene
subclass of: SO_0000704
RO_0002162: 1235990
locus tag: BMSBPS_RS04320
old locus tag: BMSBPS_p0025
so part of: sequence
location: complement(15773..16429)
location: region:15773-16429:-1
so has part: feature:15773-16429:-1:exon
subclass of: SO_0000010

position:15773:-1
position: 15773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16429:-1
position: 16429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15773-16429:-1:exon

BMSBPS_RS04320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1235990
locus tag: BMSBPS_RS04320
old locus tag: BMSBPS_p0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010255269.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2076 domain-containing protein
translation: MQLEEKNLISGLFQRLKETEQKTAPRDAEAEQHIQNFIEKQPSAPYYMAQSILIQEAALNRLNEQVLQLQNEITQLKAAPKTTSTGFLSGLFGNNRSAERLPQQAQLQTAPIVTQPSTTTLSRSSNFMSGALQTAAGVAGGMVLGNVLTNMFHHSAPEEIFNIMNYPTESDIGSNDSLLNQDFDAGNLETFNNLSDQHFIDHGDTSYSDFHNEDDGFF
SIO_010081: BMSBPS_RS04320
subclass of: SO_0000673
so part of: BMSBPS_RS04320
location: complement(15773..16429)
location: region:15773-16429:-1
so has part: feature:15773-16429:-1:exon

WP_046201244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15773-16429:-1:exon