Persephonella marina EX-H1, complete sequence.
type: Entry
definition: Persephonella marina EX-H1, complete sequence.
sequence version: NC_012440.1
sequence date: 2023-02-27
sequence: sequence
division: CON
label: NC_012440.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02604029
keyword: RefSeq
source: Persephonella marina EX-H1
organism: Persephonella marina EX-H1
taxonomy: Bacteria; Aquificota; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.
reference: 1
references: 19136599
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001230.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/27/2023 10:59:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,097\nCDSs (total) :: 2,048\nGenes (coding) :: 2,045\nCDSs (with protein) :: 2,045\nGenes (RNA) :: 49\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 40\nncRNAs :: 3\nPseudo Genes (total) :: 3\nCDSs (without protein) :: 3\nPseudo Genes (ambiguous residues) :: 0 of 3\nPseudo Genes (frameshifted) :: 0 of 3\nPseudo Genes (incomplete) :: 3 of 3\nPseudo Genes (internal stop) :: 0 of 3\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000340
sequence length: 1930284
topology: circular
so has quality: SO_0000988
location: 1..1930284
location: region:1-1930284:1
RO_0002162: 123214

NC_012440
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02604029
type: BioSample
SIO_000068: biosample

1
title: Complete and draft genome sequences of six members of the Aquificales
author: Reysenbach, A.L.
author: Hamamura, N.
author: Podar, M.
author: Griffiths, E.
author: Ferreira, S.
author: Hochstein, R.
author: Heidelberg, J.
author: Johnson, J.
author: Mead, D.
author: Pohorille, A.
author: Sarmiento, M.
author: Schweighofer, K.
author: Seshadri, R.
author: Voytek, M.A.
journal: J Bacteriol
volume: 191
issue: 6
pages: 1992-1993
year: 2009
pubmed: 19136599

19136599
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Heidelberg, J.F.
author: Reysenbach, A.-L.
author: Nelson, W.C.
journal: Submitted (13-NOV-2008) J. Craig Venter Institute, 9712 Medical Center Dr, Rockville, MD 20850, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1930284:1
position: 1930284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1930284:1:source
so part of: sequence
organism: Persephonella marina EX-H1
mol type: genomic DNA
strain: EX-H1
type material: type strain of Persephonella marina

123214
type: Taxonomy
SIO_000068: taxonomy

PERMA_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: groES
locus tag: PERMA_RS00005
old locus tag: PERMA_0001
so part of: sequence
location: complement(6..299)
location: region:6-299:-1
so has part: feature:6-299:-1:exon
subclass of: SO_0000010

position:6:-1
position: 6
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299:-1
position: 299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6-299:-1:exon

PERMA_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: groES
locus tag: PERMA_RS00005
old locus tag: PERMA_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019244433.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: co-chaperone GroES
translation: MAKIKPLYDRVVVKPAEEAEEKTPSGIIIPDTAKEKPSEGEVVAVGEGRLLENGEIAPLKVKVGDKVIYSKYAGNEFVVDGEELIVLREDDILAIVE
SIO_010081: PERMA_RS00005
subclass of: SO_0000673
so part of: PERMA_RS00005
location: complement(6..299)
location: region:6-299:-1
so has part: feature:6-299:-1:exon

WP_015898996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6-299:-1:exon

PERMA_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: glnD
locus tag: PERMA_RS00010
old locus tag: PERMA_0002
so part of: sequence
location: complement(404..3004)
location: region:404-3004:-1
so has part: feature:404-3004:-1:exon
subclass of: SO_0000010

position:404:-1
position: 404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3004:-1
position: 3004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404-3004:-1:exon

PERMA_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: glnD
locus tag: PERMA_RS00010
old locus tag: PERMA_0002
EC number: 2.7.7.59
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459612.1
GO function: GO:0008773 - [protein-PII] uridylyltransferase activity [Evidence IEA]
GO process: GO:0018177 - protein uridylylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: [protein-PII] uridylyltransferase
translation: MDKLYIDEKKRILERYFSKKEEIINKHRAGAKGLDTVRELSDITDETIKDLAKISFPDLEEVSIVVLGGYGRRELCFKSDIDISLVFKSDNFESLKAGIESFYYSLLDLKVDIGFSPRDIKTFLELSEEDLTVATSLLQGRFITGNRDIYDDLIKKFKKLIRGKRTAYINATLRARKMRYQRTGSTIYMMEPHIKEGEGGLRDFHEVYWIARVLDDVPNYHYFVEKNIILEEEYQELMRAYDFLLKIRNEMHLICNKRCDVLVRPLQEEVVKRLGYLEKPYDSEKLRESVEKLMRLYYLYAKSINTITKRILKGITEEDGFQLFEPIDAVFSRTATEIDVLNRERFERNHTNVLRAFLYFKQYNLDFSPQLEYLLRKNESKLREHRDDPEVKKLMRTIFSDVNNLAKTIRKMQEFYVIDDLIPEFGYQRCHFQYDAYHKYTTDAHAIKAVEELENLKKLDHPHKKMMYELYKEIERKDLLIWAVFLHDIGKGHKSDHSVLGSKMAKEIMLRFGYSQRDANIVSYLVLYHLEMAKISQRRNMNEPKVINDFVKVIKNKELLKMLTVLTWCDANAVGPNIWNEWKNALLWELYFKALEVLEKGLSAEEIQKRRLEEKKRRLFAMLEIDLGEDRARFHMNRFSEYYLISTPIDDIIRHIKMEEIMFRTKKPQFYFEKKYGIGASELIIAVDRSVENPLLVVTGILSYMNINILSVYSYRRKDGATIVDLQISTSTLEVVEDQKFEQFKDLFNSYIKGEITLDDLSRKSERGFKAAAVPPPTFVKVDNETSDIYTIFDVSGEDRIGLLFDIFRVFTRFNLFVHIAKVVTQGERIRDAFYVRTFDKEKLTDELIIKEVKEELLKVLRQEEF
SIO_010081: PERMA_RS00010
subclass of: SO_0000673
so part of: PERMA_RS00010
location: complement(404..3004)
location: region:404-3004:-1
so has part: feature:404-3004:-1:exon

WP_012676256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404-3004:-1:exon

PERMA_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: mutL
locus tag: PERMA_RS00015
old locus tag: PERMA_0003
so part of: sequence
location: complement(3009..4571)
location: region:3009-4571:-1
so has part: feature:3009-4571:-1:exon
subclass of: SO_0000010

position:3009:-1
position: 3009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4571:-1
position: 4571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3009-4571:-1:exon

PERMA_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: mutL
locus tag: PERMA_RS00015
old locus tag: PERMA_0003
inference: COORDINATES: protein motif:HMM:TIGR00585.2
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair endonuclease MutL
translation: MRRIKPLSEDLIRKIAAGEVVERPANVLKELIENAIDAGSDRIDIFIEKGGKRLIQVVDNGEGIHPDDMLDCVKRYTTSKISSEDDLYSISSYGFRGEALYSISSVSKFSIVSRPEDLSVGKELYIEGGVFRSFTETGAPVGTKVRVKDIFFNTPVRKKFLKSERTEFVHCLKTFINYAVVNTDIHFRLYHNGRELMNLPPSDLKKRITYIYPELSGRLLELDYTDETGRIYGYISTDERFKKEGIVYVNKRPVKNRELRKIIKSLISEKFYVLFIELPPYFVDHNVHPAKIEVKFKNDTAVKNLVREGLKALETPFKKGVTFDYTVSQRKGSYGKEKVFDLLGQVENTFIVVYYDGDIYLIDQHVVHERINYEILMEDLREDGFIKRKILNRNITHSISELEKALIEDKKGTLERSGFSFDIDGYNLVIKEIPVFVSEDQALDIFFRILMDEDAETVDYVIGEIACKLSVKSGDILSDEKAKLILKRWFETDSPNLCPHGRPVYYKVSIDDVKKAIGRG
SIO_010081: PERMA_RS00015
subclass of: SO_0000673
so part of: PERMA_RS00015
location: complement(3009..4571)
location: region:3009-4571:-1
so has part: feature:3009-4571:-1:exon

WP_012675454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3009-4571:-1:exon

PERMA_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00020
old locus tag: PERMA_0004
so part of: sequence
location: 4660..4995
location: region:4660-4995:1
so has part: feature:4660-4995:1:exon
subclass of: SO_0000010

position:4660:1
position: 4660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4995:1
position: 4995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4660-4995:1:exon

PERMA_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00020
old locus tag: PERMA_0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008287954.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5335 domain-containing protein
translation: MAIRKLERSEWESYFDQLSKKLGAKEVQIEIINEDIGDQVETWWQPLTGLSYDPKDDEFEVAAERHDHLIHKPVEIYVDEDVDGVKTVEVIQEDGTKHIIKLRSPEALPEK
SIO_010081: PERMA_RS00020
subclass of: SO_0000673
so part of: PERMA_RS00020
location: 4660..4995
location: region:4660-4995:1
so has part: feature:4660-4995:1:exon

WP_012675384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4660-4995:1:exon

PERMA_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00025
old locus tag: PERMA_0005
so part of: sequence
location: complement(5006..6517)
location: region:5006-6517:-1
so has part: feature:5006-6517:-1:exon
subclass of: SO_0000010

position:5006:-1
position: 5006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6517:-1
position: 6517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5006-6517:-1:exon

PERMA_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00025
old locus tag: PERMA_0005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673523.1
GO function: GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: menaquinone biosynthesis decarboxylase
translation: MAYRDLREFIKDLDKNGELIRIKDRVSPVLEITEIADNVMKLPDGGKALLFENVEGSDMPVLINAFGSEKRMKMALGVERFEDIGWKLYRILKPEVPHTFLDKLKRIPELKKLNDALPKTVKTGSVKEVIKKGDDIDLFEIPVLKCWPKDGGRFITLPQVISKDPENGLRNVGMYRIQILDRDKVAVHWQIHKGGAKHYWKYKKLGQKIPVAIAIGGDPVLTYVASAPLPEDVDEYLFAGIIRGKGVELVRCETVDLEVPADAEIIIEGYIDPEEPLVDEGPFGDHTGFYTPVEKYPMMHVTAVTHRKDPVYLTTIVGRPPMEDGWMGKATERIFLPLIKFNLPEVVDYNLPVSGCFHNFCFVSIKKQYPGHAYKVMDALWGMGQMMFTKNIVVFDEWVDVQSIDDVLWIWGNNVDPARDVVIKKGVIDVLDHSTDLVGFGGKMGIDATTKWKGEGYQREWPELAVMDESVKERMKPVVNRVMKEIMKSIIDKEVKKAKKYLK
SIO_010081: PERMA_RS00025
subclass of: SO_0000673
so part of: PERMA_RS00025
location: complement(5006..6517)
location: region:5006-6517:-1
so has part: feature:5006-6517:-1:exon

WP_012676487.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5006-6517:-1:exon

PERMA_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00030
old locus tag: PERMA_0007
so part of: sequence
location: 7012..7878
location: region:7012-7878:1
so has part: feature:7012-7878:1:exon
subclass of: SO_0000010

position:7012:1
position: 7012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7878:1
position: 7878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7012-7878:1:exon

PERMA_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00030
old locus tag: PERMA_0007
inference: COORDINATES: protein motif:HMM:NF014732.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Wzz/FepE/Etk N-terminal domain-containing protein
translation: MEKDKNIQKLESKDLSEKVVYYEEDEIDLYELWLTLKKRYKLVLSVTVFFILLSAVYLFLTKPVYRAEFIVKLPQGLTSPQETKNIIDNLENLRKEKRYMELSNLLGISQEKIMDIDSFSASEIRKNKNLIKVILDVYDPNIISKLSVSILEHLNNNRFVKERIEIRKETLRFSIEETNEKIKEIESIKDRILNDLKNGRIKDLGFNPVDMDRTVLSLKEKVKNLENQLKLLRGYEIAVDPVVPEKPSKPKKALILAVASVSGLFLGVFLAFFAEWIENARKRREEIL
SIO_010081: PERMA_RS00030
subclass of: SO_0000673
so part of: PERMA_RS00030
location: 7012..7878
location: region:7012-7878:1
so has part: feature:7012-7878:1:exon

WP_012676790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7012-7878:1:exon

PERMA_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00035
old locus tag: PERMA_0008
so part of: sequence
location: complement(7881..10199)
location: region:7881-10199:-1
so has part: feature:7881-10199:-1:exon
subclass of: SO_0000010

position:7881:-1
position: 7881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10199:-1
position: 10199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7881-10199:-1:exon

PERMA_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00035
old locus tag: PERMA_0008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012963123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MAVKHIKADQIKITVSIKEGTEGVKPETLFPGQERVEKAFNIGLSTEKEGYNIYVAGPDGIGKVTYSLHKIKQVSKKKKTPEDICYYNNFEEPYRPKYLLLPAGYGKKLSRDLDRSIDTLKEAVVKQFESKEFEDERVKLIKEAEEKRKSILEQLKKEAESYGLALVITPAGIQFLPIVQGKVSPEFLKIPEIKSEFEKKVELFDETFRKYLRELREIDHTLIDSLNELKKKVSEYIVENVFYRIEEKYRDIKQALRFIRYIKEKIAERIDLFIRWKILEGDFFLQRTVEREFNLFRLNVIVDNSKTEGAPYKYEEIPTFKTVFGHIAYKAEMGILYADHMSITAGSLLKVRGGYLLLRAVDILKNPFLWEALKRSILHKKVYISQHPVEEVFPFQVGIFPEPVPFDVTIILVGDNRLYNILSVYDYEFNRLFKVKAEFDPVIKLTDKVIESFPKIVKKIITEEGMKDLTADALSQLIKYSIQLSGNRKKINVIFSHINDIIREADSTSDGNLITGDDIKRTIKEKIFRENLIEEKIRELFKEGILIIDIEGKKVGQVNGLTVYDLGSFRFGKPSRITASSYIGEKGIISIEREVELSGPIYDKGVLILSGYIGSRYGKDTPLTLSCSITFEQSYGEVEGDSASAAELIAVLSSIGDIQIRQDLAITGSIDQHGNIQPVGGIKEKIEGFYKVCKVIGLTGRQGVIVPSRNFDNIILDDDVLESIGKGDFHIYTVDHIDDVIQIVSEMKPLEFHQKVKEELVQFYEKVSKGKK
SIO_010081: PERMA_RS00035
subclass of: SO_0000673
so part of: PERMA_RS00035
location: complement(7881..10199)
location: region:7881-10199:-1
so has part: feature:7881-10199:-1:exon

WP_012675706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7881-10199:-1:exon

PERMA_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00040
old locus tag: PERMA_0009
so part of: sequence
location: complement(10199..10585)
location: region:10199-10585:-1
so has part: feature:10199-10585:-1:exon
subclass of: SO_0000010

position:10585:-1
position: 10585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10199-10585:-1:exon

PERMA_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00040
old locus tag: PERMA_0009
inference: COORDINATES: protein motif:HMM:NF022591.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2914 domain-containing protein
translation: MRLIPSLIFSILMIITISKASQIEVIDMKFARDVVNREPVDVSDRFPPDIGRVYCWTKIKADTVPTKIYHVWYYNEKEMAKVELEIRYPVFRTWSYKTILPQWTGEWKVVVQDEEGNNIYEKTFEIKQ
SIO_010081: PERMA_RS00040
subclass of: SO_0000673
so part of: PERMA_RS00040
location: complement(10199..10585)
location: region:10199-10585:-1
so has part: feature:10199-10585:-1:exon

WP_012676601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10199-10585:-1:exon

PERMA_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: purN
locus tag: PERMA_RS00045
old locus tag: PERMA_0010
so part of: sequence
location: complement(10665..11312)
location: region:10665-11312:-1
so has part: feature:10665-11312:-1:exon
subclass of: SO_0000010

position:10665:-1
position: 10665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11312:-1
position: 11312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10665-11312:-1:exon

PERMA_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: purN
locus tag: PERMA_RS00045
old locus tag: PERMA_0010
EC number: 2.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012964122.1
GO function: GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylglycinamide formyltransferase
translation: MNLVVLISGRGTNLEAIIRGINSKKIKGKISLVISNKKDAKGLKIAEKYGIKTEFIDPSLYKTREEYDLKLAERIKKENPDLVVLAGYMRILTDGFIDTFENRIINIHPSLIPAFQGLKAQKQALEFGAKFTGCTVHFVTKELDSGPIIVQAVVPVMPDDSEETLSERILHYEHRIYPQAIKWLSDGRVQVKNRHVIVKGAKYGGLPVNPELEDF
SIO_010081: PERMA_RS00045
subclass of: SO_0000673
so part of: PERMA_RS00045
location: complement(10665..11312)
location: region:10665-11312:-1
so has part: feature:10665-11312:-1:exon

WP_012675876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10665-11312:-1:exon

PERMA_RS10415
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10415
old locus tag: PERMA_0011
so part of: sequence
location: complement(11350..13422)
location: region:11350-13422:-1
so has part: feature:11350-13422:-1:exon
subclass of: SO_0000010

position:11350:-1
position: 11350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13422:-1
position: 13422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11350-13422:-1:exon

PERMA_RS10415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10415
old locus tag: PERMA_0011
inference: COORDINATES: protein motif:HMM:NF013377.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF547 domain-containing protein
translation: MPLRDYIEKAKEVLDKNWMGEYTVPSVHLYPHQWNWDSGFIAIGYSRYNMERAVREILHLFEAQWKNGMLPQIVFNKNALGRYFPEPDFWRTDLSPYAPDNILTSGITMPPIHGYAVLKMYENAREKDRLIPFLKFIYPKLIKLHEYLYLERNPDDNGLIYIRHPWESGMDNSPMWDPVLERIDIDKVDIPEFERKDNKIIDPEQRPKDIDYKRYIYLVDIFRKNRYDEKRIFEECPFIVIDPLFNSILCASNEALVQIADIIKEDYKKPEEWFLMTARAVRDNLFSSEKKIFFAYDYVQKELIEVETAAGFMPLFGGIASTQQALKIYEHLDSLSFCRLGEKNCFAIPNYDKRKKDFSPHNYWRGPVWININWMLYQGLLRYKFKQKAEHLEITIMELPMRFGFYEYFDSFTGKGYGTKDFSWTAALFIDLAYDMYEKNEKRWETRSFGRDVILNVNGEHIPVEDIEEIKKDFFCLTGKIIDKYTRNGTVNYDAIRLSPEYKLLQNTVSKFANKDILRFSSKEEEMAFWINLYNMMVIDAIIRLNIQGSVKEIEGFFTNIKYRINGKDYSLDDIREILKKFKDKRVPFALVKGTNSSPPLRLFTKRNIRSKLDSAARDFIRSPEVIILPEEKKVLISELFRWNEDYFKDKEEIIKFIKRYVKDDIKKEFLEKEDDIEIRYLLYDWTLNG
SIO_010081: PERMA_RS10415
subclass of: SO_0000673
so part of: PERMA_RS10415
location: complement(11350..13422)
location: region:11350-13422:-1
so has part: feature:11350-13422:-1:exon

WP_012676844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11350-13422:-1:exon

PERMA_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: purM
locus tag: PERMA_RS00055
old locus tag: PERMA_0012
so part of: sequence
location: complement(13442..14464)
location: region:13442-14464:-1
so has part: feature:13442-14464:-1:exon
subclass of: SO_0000010

position:13442:-1
position: 13442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14464:-1
position: 14464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13442-14464:-1:exon

PERMA_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: purM
locus tag: PERMA_RS00055
old locus tag: PERMA_0012
EC number: 6.3.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459358.1
GO function: GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylformylglycinamidine cyclo-ligase
translation: MISYKDAGVDIEKADRFVQQIKGFVKSTFNSNVITPIGGFAAAYLLEISKYKNPVITSSTDGVGTKLKIAQELDKHDTIGIDLVAMCVNDLVTTTSKPLFFLDYFATGKLEPHVAVDVVKGITEGCKQSECALIGGETAEMPGMYRDGEYDLAGFAVGIVERENMLDGSKTEEGDILIGIPSSGVHSNGYSLVRKIVEIKKYRYTDRIEEFGKTLGEELLTPTKIYVKTILSLADKVNIHSVAHITGGGIPGNLIRVINEGLTAVIERGRWDIPPVFRWIQKEGNITDEEMFRTFNMGLGMIIALPEKEADKALKIISESGEKAYIIGELKKGEKAVNII
SIO_010081: PERMA_RS00055
subclass of: SO_0000673
so part of: PERMA_RS00055
location: complement(13442..14464)
location: region:13442-14464:-1
so has part: feature:13442-14464:-1:exon

WP_012676194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13442-14464:-1:exon

PERMA_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00060
old locus tag: PERMA_0014
so part of: sequence
location: 14530..15078
location: region:14530-15078:1
so has part: feature:14530-15078:1:exon
subclass of: SO_0000010

position:14530:1
position: 14530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15078:1
position: 15078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14530-15078:1:exon

PERMA_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00060
old locus tag: PERMA_0014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880824.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NTPase
translation: MKILITGRPGIGKTTVIKKVIQKISDNVCGFYTEDYRDSKGKRKGFRIFTTEGKTEILADKELVSKYRVGSYGVNLEGFERSVIPLLERCLEDKNRIIVIDEIGKMELFSGKFVDIVKDIFEDENRTVIATIPLKDVHPVLRWIKDLPDSVVINISLKNRDLIPDRIVEMVQRSSSQRFDKS
SIO_010081: PERMA_RS00060
subclass of: SO_0000673
so part of: PERMA_RS00060
location: 14530..15078
location: region:14530-15078:1
so has part: feature:14530-15078:1:exon

WP_012675911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14530-15078:1:exon

PERMA_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00065
old locus tag: PERMA_0013
so part of: sequence
location: complement(15042..15911)
location: region:15042-15911:-1
so has part: feature:15042-15911:-1:exon
subclass of: SO_0000010

position:15042:-1
position: 15042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15911:-1
position: 15911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15042-15911:-1:exon

PERMA_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00065
old locus tag: PERMA_0013
inference: COORDINATES: protein motif:HMM:NF012993.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbon-nitrogen hydrolase
translation: MQTRSVEDTKENLEKTLEYVYEAGKSGADIICTQELFKTVYFCQTEDWDNFRYAEVIDQNNDTVKAFSKIAKDTQSVIILSLFEKRAEGLYHNTVAVLDADGSYLGKYRKMHIPDDPHFYEKFYFTPGDLGYKVFKTRYANVGTLICWDQWFPEAARLTAMKGADIIFYPTAIGWLPEEKEDYGESQYNAWETVQRGHAVANGCYIAAVNRVGFEPSPDGNGGIEFWGRSFISDPYGNVIKKASGEKEEVLIHEIDLSLIDETRITWPFFRDRRIETYHDLSKRWLEDL
SIO_010081: PERMA_RS00065
subclass of: SO_0000673
so part of: PERMA_RS00065
location: complement(15042..15911)
location: region:15042-15911:-1
so has part: feature:15042-15911:-1:exon

WP_274377783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15042-15911:-1:exon

PERMA_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00070
old locus tag: PERMA_0015
so part of: sequence
location: complement(15938..16336)
location: region:15938-16336:-1
so has part: feature:15938-16336:-1:exon
subclass of: SO_0000010

position:15938:-1
position: 15938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16336:-1
position: 16336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15938-16336:-1:exon

PERMA_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00070
old locus tag: PERMA_0015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545966.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: secondary thiamine-phosphate synthase enzyme YjbQ
translation: MLKYIEVVTQKRTHFEDITDAVQEVIDESGIDEGICCVYVPHTTAGVFINENADPDVKWDIEKTLDKLIPWEDQYSHVEGNAAAHIKSVLTGNSLYIPVKNGKLLLGTWQGIFFAEFDGPRDRKVIIKVLEG
SIO_010081: PERMA_RS00070
subclass of: SO_0000673
so part of: PERMA_RS00070
location: complement(15938..16336)
location: region:15938-16336:-1
so has part: feature:15938-16336:-1:exon

WP_012676552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15938-16336:-1:exon

PERMA_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00075
old locus tag: PERMA_0016
so part of: sequence
location: complement(16329..16988)
location: region:16329-16988:-1
so has part: feature:16329-16988:-1:exon
subclass of: SO_0000010

position:16329:-1
position: 16329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16988:-1
position: 16988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16329-16988:-1:exon

PERMA_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00075
old locus tag: PERMA_0016
inference: COORDINATES: protein motif:HMM:NF012383.2
GO process: GO:0009116 - nucleoside metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosyltransferase family protein
translation: MRDKEFVFENRDEAGEKLAEFLKDIIDKNSIVLAIPSGGVPIGIKISEKLKIPFDLIPVKKLTFPWNPEAGFGAVTVEGDTFINEEAVRMTGITEDIIKKQKEKTINVLRERNRKFRENRPFPDLKGKTVIIVDDGLASGYTMLAAISMVKRKKPEKIIVAVPTCSKSSVDRIISESDAVVCLNYRTGYPYAVADAYKEWYDLTDQDVLYYLKKEEKDA
SIO_010081: PERMA_RS00075
subclass of: SO_0000673
so part of: PERMA_RS00075
location: complement(16329..16988)
location: region:16329-16988:-1
so has part: feature:16329-16988:-1:exon

WP_049756053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16329-16988:-1:exon

PERMA_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: dtd
locus tag: PERMA_RS00080
old locus tag: PERMA_0018
so part of: sequence
location: 17056..17499
location: region:17056-17499:1
so has part: feature:17056-17499:1:exon
subclass of: SO_0000010

position:17056:1
position: 17056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17499:1
position: 17499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17056-17499:1:exon

PERMA_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: dtd
locus tag: PERMA_RS00080
old locus tag: PERMA_0018
EC number: 3.1.1.96
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675443.1
GO function: GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-aminoacyl-tRNA deacylase
translation: MIAVIQRVNRSYVEVDGKVVGEIGKGLNILLGVVKGDTEEDIDKLIKKIPFLRIFEDENGKMNLSVIDIKGEALVISQFTLAGSVKKGRRPSFDNAEEPERAKELYQRFVERLSEYIPVKTGVFAAHMKVFIENDGPVTFIIDSKAL
SIO_010081: PERMA_RS00080
subclass of: SO_0000673
so part of: PERMA_RS00080
location: 17056..17499
location: region:17056-17499:1
so has part: feature:17056-17499:1:exon

WP_012675443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17056-17499:1:exon

PERMA_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00085
old locus tag: PERMA_0017
so part of: sequence
location: complement(17485..18951)
location: region:17485-18951:-1
so has part: feature:17485-18951:-1:exon
subclass of: SO_0000010

position:17485:-1
position: 17485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18951:-1
position: 18951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17485-18951:-1:exon

PERMA_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00085
old locus tag: PERMA_0017
inference: COORDINATES: protein motif:HMM:NF013173.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trehalose-6-phosphate synthase
translation: MEKGSNLIVVSAVLPIHIKKEDGRYTVHISPGGLVTALKQVLHKRKALWIGWAGSEKITPKMKNLIFEEGKKEGFLLYPISLTEREIDHFFNGFSNGIIWPMFHTFQYFCRFEPEYWKAYQEVNRKFARYIKSISTEKDLVWVHDYHFFLLPQYIENLGLKRKTAFFLHIPFPNPELFFKIPWRVEILKGMLRYDLIGFHTFIDRKNFLDCIDELVEGVNILSTEPVTEILYEGKKIKIGVFPISVDFNYYSSLSEKSEKSRFPFKDLKVILGIDRLDYTKGLIQKIRSYKRFLEKYPEFHKKVVLVQAVAPNIKKLPEYDQLKVELEHLISETNGRFGTPDWTPIYYYPRRMPFEDLINYYRFSDICWVNSIKDGMNLVAKEYIACQIENKGALMLSEFTGAAAELRDHACLVNPYDIEGCADALYRVLTKDSSKKELKMQRMREHIKHYDISWWGNTMLETAFGKKIIDFPELEEDIPLHELSKSF
SIO_010081: PERMA_RS00085
subclass of: SO_0000673
so part of: PERMA_RS00085
location: complement(17485..18951)
location: region:17485-18951:-1
so has part: feature:17485-18951:-1:exon

WP_012676747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17485-18951:-1:exon

PERMA_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: der
locus tag: PERMA_RS00090
old locus tag: PERMA_0019
so part of: sequence
location: complement(18995..20338)
location: region:18995-20338:-1
so has part: feature:18995-20338:-1:exon
subclass of: SO_0000010

position:18995:-1
position: 18995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20338:-1
position: 20338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18995-20338:-1:exon

PERMA_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: der
locus tag: PERMA_RS00090
old locus tag: PERMA_0019
EC number: 3.6.5.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676167.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTPase Der
translation: MYRVAIVGRPNVGKSSLFNRIIGKRKAIVEDIPGVTRDRIVSTAEWRGVTFEVVDTGGYIESDKDTFAPYIRKQIEKELELSDAFILVVDGKEGLTPADKEIARILHRTDKPVYVAVNKIDNPEMEKAIYEFYELGFEKVFPVSSIQKYGVADLLDAVVQDIPEYEREASKEVGEKEEKSDVIKVAIVGKPNAGKSSLLNAILGEERAVVSEIPGTTRDVVDTLFEWKDQKFLFLDTAGLRKKSKVDYGIEFFSIGRTLDAIKKADVIVHVIDAQQGATEQDTKIAHLIQKYTKPAVIVINKIDTVPPKSEVLNRIKNQVRERLYFIPYAPIVMTSAKNRKGIKQLLKEITDVYNQSWKRVGTGQLNRAIKQILSLRQPPSYHGKPLKIYYATQLEGKPPCFLLFVNHPEGFKEHFLRFLENNLRTVLGFEKAPIKLLLRGKEERRD
SIO_010081: PERMA_RS00090
subclass of: SO_0000673
so part of: PERMA_RS00090
location: complement(18995..20338)
location: region:18995-20338:-1
so has part: feature:18995-20338:-1:exon

WP_012676167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18995-20338:-1:exon

PERMA_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00095
old locus tag: PERMA_0020
so part of: sequence
location: 20420..20854
location: region:20420-20854:1
so has part: feature:20420-20854:1:exon
subclass of: SO_0000010

position:20420:1
position: 20420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20854:1
position: 20854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20420-20854:1:exon

PERMA_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00095
old locus tag: PERMA_0020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKFKLSVFYTILIFSLSFANLTGELEFKPEKEIINKDEKVCFHLVNNSDKAVYLPSSAPWAVFEDEDFDKIVFSPIAAQRILEIKPYEEKKWCWDLKDFQGEIVPSGDYAIRLTVFKNGERVFLVSKIKVKPGVAETSKKEEE
SIO_010081: PERMA_RS00095
subclass of: SO_0000673
so part of: PERMA_RS00095
location: 20420..20854
location: region:20420-20854:1
so has part: feature:20420-20854:1:exon

WP_012676744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20420-20854:1:exon

PERMA_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: murJ
locus tag: PERMA_RS00100
old locus tag: PERMA_0021
so part of: sequence
location: 20880..22394
location: region:20880-22394:1
so has part: feature:20880-22394:1:exon
subclass of: SO_0000010

position:20880:1
position: 20880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22394:1
position: 22394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20880-22394:1:exon

PERMA_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: murJ
locus tag: PERMA_RS00100
old locus tag: PERMA_0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459660.1
GO process: GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein biosynthesis integral membrane protein MurJ
translation: MKRDRFVLNTAVFSAATFISRILGYIRDAVIAFIFGANPLTDAFFVAWRLPNTLRQLIGEGSFNAVFIPIYTEEKKISEESANRYASSLFTYYTLLISLITVFVILFADFFVRIIAPGFVEKGNFEEAVNLVRMVFPYLILVGWVSFFMALLNMRDRFFIPAVSPALLNLSFIISALFLSQYYGIYALAIGAISGGILQVLLQILFAYREGIRLGFSFRFHQRIKETFKRMIPAFSSFGVSQFAFVIDTVIASFLVGGSVSYLYYGNRIFQLPLGLFAIGLGNALLVSLSRYFSEKDMDGFYRDLNNGIKLAIFISIPATVGMIVLGKEIIQLLLMRGEFRESDTLMTYYALVGYSIGLTGYALTRPFKSAFFAVGDMKTPLNSTVFGLGVSIIFAVLLGFLMKWGVFGLATASSIGGMAGLFYLYKRSDFKINRNDIVITMIKVVTSSLFMAFAVYIFKEAVPSIIIQVFGGVLVGIVVYFLSSYILRESSFIFFIKTIGKKL
SIO_010081: PERMA_RS00100
subclass of: SO_0000673
so part of: PERMA_RS00100
location: 20880..22394
location: region:20880-22394:1
so has part: feature:20880-22394:1:exon

WP_012676651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20880-22394:1:exon

PERMA_RS10420
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10420
old locus tag: PERMA_0023
so part of: sequence
location: 22479..23495
location: region:22479-23495:1
so has part: feature:22479-23495:1:exon
subclass of: SO_0000010

position:22479:1
position: 22479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23495:1
position: 23495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22479-23495:1:exon

PERMA_RS10420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10420
old locus tag: PERMA_0023
inference: COORDINATES: protein motif:HMM:TIGR00254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MGKISKKIFILIFVLIGLILINNVFLFFMMNNIKKSSEVINLSGKIRGNIQRIVKLSLTESPPEKLIDIVDFYMRNLVEKEKYLYLPFSSGHSEAGKLKKCWEDVKELIYDGADPERLIGVSERCWYMANEITYRYQKLSEENISYFIVIFSINGIITFLVLGILVIIAKKEVKGKLEFQAHYDPLTKVLNRRSFIAIYNSIINRNDIFPASLMIMDIDDFKKINDTYGHNVGDKVLKKIVDVIKSNIRKKDLFVRWGGEEFIIFFPETDIDQARVVAEKIRRLIENIKFEENFNVTVSIGITELKKGEFLVEVIKRADRALYRAKKNNKNRVEIVID
SIO_010081: PERMA_RS10420
subclass of: SO_0000673
so part of: PERMA_RS10420
location: 22479..23495
location: region:22479-23495:1
so has part: feature:22479-23495:1:exon

WP_012675902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22479-23495:1:exon

PERMA_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: pyk
locus tag: PERMA_RS00110
old locus tag: PERMA_0022
so part of: sequence
location: complement(23485..24924)
location: region:23485-24924:-1
so has part: feature:23485-24924:-1:exon
subclass of: SO_0000010

position:23485:-1
position: 23485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24924:-1
position: 24924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23485-24924:-1:exon

PERMA_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: pyk
locus tag: PERMA_RS00110
old locus tag: PERMA_0022
EC number: 2.7.1.40
inference: COORDINATES: protein motif:HMM:NF004978.0
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004743 - pyruvate kinase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyruvate kinase
translation: MRRTKIVATLGPATSSEEMIEKLILSGVDVFRFNFSHGDHETHLQNLKKVRSISEKLGKPIAVLQDLSGPKIRIGVVEEPFYLHFEDRIRIVKEEVIGNKERISINYPEVLDQLEKGSYIYISDGSIRLQVVDKDDEGITAKVIVGGMVSSKKGVNFPNVRLNIPSITEKDKKDIKFAIEEDIDLIALSFVKTAEDVIQAKEIIRSYGGDTPLFAKIEKHEAIENIDRIIEEADGIMVARGDLGVEIDMEKVPVLQKMIIKKANEKGKPVITATQMLTSMVSSPRPTRAEVSDIANAVLDGTDAVMLSDETTVGKYPLEAVKVMERTICETEKVYPFFTEKEHAPTDPSLSVAYASNSLAKNLNGKAIAVFTKTGRTVRNVAKFRPKCPVLALTHDEKTLRRLNIVWGVKPYMIIKEEKDTDRMLCEFIGKAYTEDYRTDEIVITLIGYVGSIPGSTNIIRILMEGDVKQLLKECRISQ
SIO_010081: PERMA_RS00110
subclass of: SO_0000673
so part of: PERMA_RS00110
location: complement(23485..24924)
location: region:23485-24924:-1
so has part: feature:23485-24924:-1:exon

WP_012675623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23485-24924:-1:exon

PERMA_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00115
old locus tag: PERMA_0024
so part of: sequence
location: 25030..25422
location: region:25030-25422:1
so has part: feature:25030-25422:1:exon
subclass of: SO_0000010

position:25030:1
position: 25030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25422:1
position: 25422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25030-25422:1:exon

PERMA_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00115
old locus tag: PERMA_0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676349.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor
translation: MLKSNDVKRRNTYQRKIILDILRSTNIHPTADWIYEQARKEIPNISLGTVYRNLKILKESGQIIEINDGKQSRFDGRIDEHYHFKCISCERIFDVEKEDISGLKVNSKKFTVHRIDILITGVCNLCNGDN
SIO_010081: PERMA_RS00115
subclass of: SO_0000673
so part of: PERMA_RS00115
location: 25030..25422
location: region:25030-25422:1
so has part: feature:25030-25422:1:exon

WP_012676336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25030-25422:1:exon

PERMA_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00120
old locus tag: PERMA_0025
so part of: sequence
location: 25426..26016
location: region:25426-26016:1
so has part: feature:25426-26016:1:exon
subclass of: SO_0000010

position:25426:1
position: 25426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26016:1
position: 26016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25426-26016:1:exon

PERMA_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00120
old locus tag: PERMA_0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460130.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfite oxidase-like oxidoreductase
translation: MKKIVSPINSRPDRLPPGQHWTNKLHVLGISDPPDTDLSHYRLRIFGEVEEEIVLTWEDILDLEKVNLIADFHCVTRWSCPDVSWTGFQSLEIKKLVKIKDTAKAVMIHSLDGYTTNIPLEYFFDEDVIFAYRLFDKPLPADHGFPLRLVVPKLYAWKSAKHVSGIEFLSENRPGFWEQRGYHILGDPWKEQRYSV
SIO_010081: PERMA_RS00120
subclass of: SO_0000673
so part of: PERMA_RS00120
location: 25426..26016
location: region:25426-26016:1
so has part: feature:25426-26016:1:exon

WP_012676974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25426-26016:1:exon

PERMA_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00125
old locus tag: PERMA_0027
so part of: sequence
location: 25989..27074
location: region:25989-27074:1
so has part: feature:25989-27074:1:exon
subclass of: SO_0000010

position:25989:1
position: 25989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27074:1
position: 27074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25989-27074:1:exon

PERMA_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00125
old locus tag: PERMA_0027
inference: COORDINATES: protein motif:HMM:NF013696.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M20 family metallopeptidase
translation: MERTEILSLKTLEAVKEELFNLISIPSHREFSKILEYLEKRLDYIQFEKQPVKDKDYNLISIDPSRPVLINTHVDTVPPIRMKNPFKPVEIDGKIYGRGAADTKGLIASLIVALDLFRDRYPDREIPVSLAFTVDEEQNSALGSEVLVNNLEGIDYAVVLEPTYGKICVKQMGTVEFKLKVKSDSYHASEFERADNPVKKVFSAIKRIESRLGREVNILSFRSGWEHYATPDEAEVLAEIKVYEGEKADQLEKLIKGTVEKELDVNYKGIDKEDFISFPEGFIFRKLCQAYRAVIGKEPQTGVMPSWTDAANFKKAGIECVIFGFGSLADCHTEREYITVEELKSNTAVLYSLLTILSQSR
SIO_010081: PERMA_RS00125
subclass of: SO_0000673
so part of: PERMA_RS00125
location: 25989..27074
location: region:25989-27074:1
so has part: feature:25989-27074:1:exon

WP_049756054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25989-27074:1:exon

PERMA_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00130
old locus tag: PERMA_0026
so part of: sequence
location: complement(27038..27526)
location: region:27038-27526:-1
so has part: feature:27038-27526:-1:exon
subclass of: SO_0000010

position:27038:-1
position: 27038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27526:-1
position: 27526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27038-27526:-1:exon

PERMA_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00130
old locus tag: PERMA_0026
inference: COORDINATES: protein motif:HMM:NF012792.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MEKKGNFQEKDKVKLKNYSDSYKKELINALFEAYLDLPEYGEPSYKSAKRYINWLKNHSTLFKVAFYNGEIAGFVVADANWKDLYGRDVGEIHELAVRKKFWGKGIGKTLLEEALKHLKEKGKKEIGLWVGRKNRKAIEFYKKYGFKIEESYRDWLRMVRRE
SIO_010081: PERMA_RS00130
subclass of: SO_0000673
so part of: PERMA_RS00130
location: complement(27038..27526)
location: region:27038-27526:-1
so has part: feature:27038-27526:-1:exon

WP_012676654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27038-27526:-1:exon

PERMA_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00135
old locus tag: PERMA_0028
so part of: sequence
location: 27686..29002
location: region:27686-29002:1
so has part: feature:27686-29002:1:exon
subclass of: SO_0000010

position:27686:1
position: 27686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29002:1
position: 29002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27686-29002:1:exon

PERMA_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00135
old locus tag: PERMA_0028
inference: COORDINATES: protein motif:HMM:NF024786.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine 2,3-aminomutase
translation: MRYRSYTVKNFRTIPQVEKYLTEKQKFDIEVVGQVFPFKVNNYVIDQLINWEDPLNDPIFRLTFPQKDMLFPEHYELIARLLKNGEPQEKIREEANRIRMELNPHPAGQKYNVPEVDGIKLHGAQHKYKETILFFPKQGQTCHAYCSFCFRWPQFVGINELKFAMKEVDVLIEYIKRNPEITDILFTGGDPLIMKTSVLKSYIQPVLEANIPHLKTIRIGTKSLGFWPYRFTEDEDAQELLDLFRQIVDRGYHLAFMAHFNHYKELRTDVVREAVDKILETGAVIRTQSPVLRHINDSSEVWATMWKEQVSMGMIPYYMFMARDTGAQHYFGVPLVRAWNIFRDAYKKTSGLARTVKGPSMSATPGKVRILGVSEIFGEKVMVLDFLQGRNPDWVGKPFFAKYDENAMWLDELEPVEGEEFFYEKELREMLKLEEEKV
SIO_010081: PERMA_RS00135
subclass of: SO_0000673
so part of: PERMA_RS00135
location: 27686..29002
location: region:27686-29002:1
so has part: feature:27686-29002:1:exon

WP_012676875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27686-29002:1:exon

PERMA_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: guaA
locus tag: PERMA_RS00140
old locus tag: PERMA_0029
so part of: sequence
location: 29016..30554
location: region:29016-30554:1
so has part: feature:29016-30554:1:exon
subclass of: SO_0000010

position:29016:1
position: 29016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30554:1
position: 30554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29016-30554:1:exon

PERMA_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: guaA
locus tag: PERMA_RS00140
old locus tag: PERMA_0029
EC number: 6.3.5.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880099.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO process: GO:0006177 - GMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing GMP synthase
translation: MEHRGIIILDFGSQYTQLIARRIRELHIFSEILPFNASVEEIMSHNPKGIIFSGGPASVYHPDAPKPDERVFDLGLPILGICYGLQLITHHFGGEVVKAERHEYGRAELEILDHSDLFKDIPNEIHVWMSHGDRVTKLPEGFEPIARTYNAPFAAIRNREKKIWGVQFHPEVAHTYLGKDILKNFAVQICGCSQDWTMGSFLMEKEVEIRKMVGDKKAICALSGGVDSSVAAVLVHNAIGDNLTCIFVDNGLLRKGEREKVEKTFRDHFHIPLIVVDARERFLEALKGVTDPEQKRKIIGNLFIEIFEEEAKKIPDVEFLVQGTLYPDVIESVSVKGPSAVIKTHHNVGGLPEKMNLKLIEPLRELFKDEVRELGKELGLPDEIIYRQPFPGPGLAIRIIGEVNKEDLEILREADAIVVEEVKKAGLYRQLWQSFAVLLPVLTVGVMGDYRTYEKVIAVRAVESTDGMTADWARLPYDLLDRIMRRIINEVKGVNRVVYDITSKPPGTIEWE
SIO_010081: PERMA_RS00140
subclass of: SO_0000673
so part of: PERMA_RS00140
location: 29016..30554
location: region:29016-30554:1
so has part: feature:29016-30554:1:exon

WP_012675545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29016-30554:1:exon

PERMA_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00145
old locus tag: PERMA_0030
so part of: sequence
location: 30554..30928
location: region:30554-30928:1
so has part: feature:30554-30928:1:exon
subclass of: SO_0000010

position:30928:1
position: 30928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30554-30928:1:exon

PERMA_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00145
old locus tag: PERMA_0030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRVLKGNIRFTKPVVEKLLDIHYVVENEGREILKHRFLILSYDEFDKDLKKIIDEIDENIKLAVVEQVALVNFGDEDIHRNLETEIFYDDKWIEKHNPDYINFEDWIIQFIDRAIFEGKRCKE
SIO_010081: PERMA_RS00145
subclass of: SO_0000673
so part of: PERMA_RS00145
location: 30554..30928
location: region:30554-30928:1
so has part: feature:30554-30928:1:exon

WP_012676290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30554-30928:1:exon

PERMA_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00150
old locus tag: PERMA_0031
so part of: sequence
location: 30925..31614
location: region:30925-31614:1
so has part: feature:30925-31614:1:exon
subclass of: SO_0000010

position:30925:1
position: 30925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31614:1
position: 31614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30925-31614:1:exon

PERMA_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00150
old locus tag: PERMA_0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008287272.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MNLFITGIGSGLGKALVKVFLEEGYSVYALSRHLPEEFRGKIRFSYCDLLSLESIYPAVDSILNTVKSIDFVILNAGLLTELKDIHDTPIYEMNRMMDINVWANKVILDYFIDKNIKVNQIVAISSGASVNGNRGWHGYSISKAALNMLIKLYSREMEETHLISLAPGLILTPMLEKFVLSADEKKFPSVKRIKESPKMSPEEAAHRIYRLLPELRRFQSGSYIDIRKI
SIO_010081: PERMA_RS00150
subclass of: SO_0000673
so part of: PERMA_RS00150
location: 30925..31614
location: region:30925-31614:1
so has part: feature:30925-31614:1:exon

WP_012676279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30925-31614:1:exon

PERMA_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00155
old locus tag: PERMA_0032
so part of: sequence
location: 31670..31990
location: region:31670-31990:1
so has part: feature:31670-31990:1:exon
subclass of: SO_0000010

position:31670:1
position: 31670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31990:1
position: 31990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31670-31990:1:exon

PERMA_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00155
old locus tag: PERMA_0032
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEDITGKILETDREAYRILKEAEEKYEEIVKKAEEDSEKILQNYRNKIEKQKTELEKRFLEEIERERSEKERELEGKLKKIREDFKKNREKIVSEILGIIQDEICR
SIO_010081: PERMA_RS00155
subclass of: SO_0000673
so part of: PERMA_RS00155
location: 31670..31990
location: region:31670-31990:1
so has part: feature:31670-31990:1:exon

WP_012675432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31670-31990:1:exon

PERMA_RS00160
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00160
old locus tag: PERMA_0033
so part of: sequence
location: 31981..32823
location: region:31981-32823:1
so has part: feature:31981-32823:1:exon
subclass of: SO_0000010

position:31981:1
position: 31981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32823:1
position: 32823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31981-32823:1:exon

PERMA_RS00160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00160
old locus tag: PERMA_0033
inference: COORDINATES: protein motif:HMM:NF014094.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATPase subunit
translation: MQIAKLHRSVYISSKSRTLKSKILRPEFFEQLLSSKTVGDIKSFLQGTDYGSFIGGFEDSDIYEGLEDYFYDLFIKVTTGLGRREKELLYLFFIKRRDIIKLKGEIRKGKDYELRLRKIDLSYIKQLKESVGKLPVSERREAKFIIGSFYDLQNLITAVKLRIIYRSQPEDVYPFILPFGYKTGYRLISEILSSSSLSDVSRILKDIIGEFSDFVSFRKAVYRYHIDQINKVWYGYPFKFSIPFALLRLKEIEIKNIKAVYEGKKFRMPDEEIKKMLVGV
SIO_010081: PERMA_RS00160
subclass of: SO_0000673
so part of: PERMA_RS00160
location: 31981..32823
location: region:31981-32823:1
so has part: feature:31981-32823:1:exon

WP_012676524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31981-32823:1:exon

PERMA_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00165
old locus tag: PERMA_0034
so part of: sequence
location: 32826..34613
location: region:32826-34613:1
so has part: feature:32826-34613:1:exon
subclass of: SO_0000010

position:32826:1
position: 32826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34613:1
position: 34613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32826-34613:1:exon

PERMA_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00165
old locus tag: PERMA_0034
inference: COORDINATES: protein motif:HMM:NF013647.2
GO component: GO:0033179 - proton-transporting V-type ATPase, V0 domain [Evidence IEA]
GO function: GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO process: GO:1902600 - proton transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATPase 116kDa subunit family protein
translation: MLFPEKMLYVRVKIPKDKVDEEIQNIGKASVLHIDQRKGKRVYLEEEKRVSYLYNLSEKCIDILRLKKEEKVIVSRPLSLEDIERELMVISSEIDTISNLDKEVGREIQILEKVRMVERSLSDTLNLIKLAQELKIIKISAGIIPVENLEPAVLSVKEYGGFAVSKVVSEGSCVIVILYTEDIKDHIDRILDKNRVEVLPVEYFSKKKEDEISGKLKKLEEKRRVISQKYGRDILVINAVLKSLEKIYRVKESLDLENEYFILYGWIPYRKRDLFLRAVRYSKVDLFPAGEDAPVLLRTPKIFKPFERLIENFSYPKYGEINPTIPFGVTFLLLFGIMFGDVGHGFTLSAVGYFLRKRYKDAGEIFILTGFSSAFFGFLYGSFFGFHGVIPSILFPPIENIERILTLSIAVGIMVITAGFILNMISLVKRKKFIALITGEGGLLWFLIYWYLIGIFVKGLVFNTDIKYDLVALGFLLFISFIIILYRTKTVTGSIIDTLRELLEYFTNTISFIRLGAFALAHSALFLAVFTVAKLIETERGGGFLYWLVIVGGNIFIIVLEGIIVAIQTLRLEYYEFFKRFYVGGGIPYRPFSLP
SIO_010081: PERMA_RS00165
subclass of: SO_0000673
so part of: PERMA_RS00165
location: 32826..34613
location: region:32826-34613:1
so has part: feature:32826-34613:1:exon

WP_012675643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32826-34613:1:exon

PERMA_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00170
old locus tag: PERMA_0035
so part of: sequence
location: 34660..34932
location: region:34660-34932:1
so has part: feature:34660-34932:1:exon
subclass of: SO_0000010

position:34660:1
position: 34660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34932:1
position: 34932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34660-34932:1:exon

PERMA_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00170
old locus tag: PERMA_0035
inference: COORDINATES: protein motif:HMM:NF012365.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase subunit C
translation: MGRYLKILFLALLPAFAFADEGLAYIAAALAVGLSSLAAGIAVGLVGAAAMGTIGEKPELSGRALIFIGLAEGIAIYGLIIAILILGTIE
SIO_010081: PERMA_RS00170
subclass of: SO_0000673
so part of: PERMA_RS00170
location: 34660..34932
location: region:34660-34932:1
so has part: feature:34660-34932:1:exon

WP_012675830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34660-34932:1:exon

PERMA_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00175
old locus tag: PERMA_0036
so part of: sequence
location: 34929..35231
location: region:34929-35231:1
so has part: feature:34929-35231:1:exon
subclass of: SO_0000010

position:34929:1
position: 34929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35231:1
position: 35231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34929-35231:1:exon

PERMA_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00175
old locus tag: PERMA_0036
inference: COORDINATES: protein motif:HMM:NF014092.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit F
translation: MRIFVLGNQDEIVGFSLAGVDTLEVSDEKDFIEKMDSLLSSDDVGIIAVVDRYFDTFQDNFSERVRKKAVPSVVFIPSIDGIHIKKDLKGFLAGVLGIRL
SIO_010081: PERMA_RS00175
subclass of: SO_0000673
so part of: PERMA_RS00175
location: 34929..35231
location: region:34929-35231:1
so has part: feature:34929-35231:1:exon

WP_012676435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34929-35231:1:exon

PERMA_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00180
old locus tag: PERMA_0037
so part of: sequence
location: 35209..35745
location: region:35209-35745:1
so has part: feature:35209-35745:1:exon
subclass of: SO_0000010

position:35209:1
position: 35209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35745:1
position: 35745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35209-35745:1:exon

PERMA_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00180
old locus tag: PERMA_0037
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFSESDFESFLQTVIYKSKLQAEKKIKKAEDVYREKIEEARREGEKLFESEIESFKEYLETEKTRRILEIQMLVRRRENEEIGKIIQEVKRDIRSILEERFEDYLVCFSRWLKKRFKEGTVHTPERWSHLFKGFDLRIDEKEKVVFEKDQVYISFSADDIFRMYEEKIDALVLKYIKG
SIO_010081: PERMA_RS00180
subclass of: SO_0000673
so part of: PERMA_RS00180
location: 35209..35745
location: region:35209-35745:1
so has part: feature:35209-35745:1:exon

WP_148206387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35209-35745:1:exon

PERMA_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00185
old locus tag: PERMA_0038
so part of: sequence
location: 35749..37479
location: region:35749-37479:1
so has part: feature:35749-37479:1:exon
subclass of: SO_0000010

position:35749:1
position: 35749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37479:1
position: 37479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35749-37479:1:exon

PERMA_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00185
old locus tag: PERMA_0038
EC number: 7.1.2.2
inference: COORDINATES: protein motif:HMM:NF003220.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit A
translation: MARISYISGSVVKAKLEGERPSLLEMVYVGKDKLIGEVISVSEDEAVVQVYENTEGISLGEDITFSGEMLSAVLSPGLLGKAFDGIQRPLNRLGRKIKKGERYFPVDRDKRWRFFPSVKEGEYIFYGQEIGYVEEGSFIHRILSTGEGRAVYVAGEGDYTVEDTVVKLENGTEIKMLREHPLRVPLRFKKRLKPDIPMITGQRIIDFLFPIAKGGTASIPGGFGTGKTVLQQTLAKWSDADLIVYIGCGERGNEMTEVLNEFPQLEDPYTGKKLIERTVLIANTSDMPVSAREASIYLGITIAEYFRDMGYHVALMADSTSRWAEAIRELSARINEIPAEEGFPADLASKIASVYERAGYVEAFSGKKGSITVIGAVSPPGGDFSEPVTRHTRRFTTVFWALDKELASSRFYPAINYMLSYSGYVDTVRRWWEERSPEWFDLREWMIKILQEDDKLQRIVKLLGSESLPEDKRLVVEIAYLIKEIFLQQNAFDPVDAHSSPEKQIKIAEILRLVHDLWIKAFEEKKIPVKILKDQPEIQEFLRSKYEVGNDRIEEYDRLMERIKERYHHLILSYGE
SIO_010081: PERMA_RS00185
subclass of: SO_0000673
so part of: PERMA_RS00185
location: 35749..37479
location: region:35749-37479:1
so has part: feature:35749-37479:1:exon

WP_012676220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35749-37479:1:exon

PERMA_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00190
old locus tag: PERMA_0039
so part of: sequence
location: 37482..38825
location: region:37482-38825:1
so has part: feature:37482-38825:1:exon
subclass of: SO_0000010

position:37482:1
position: 37482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38825:1
position: 38825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37482-38825:1:exon

PERMA_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00190
old locus tag: PERMA_0039
inference: COORDINATES: protein motif:HMM:NF003235.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit B
translation: MLIEYKGGISIKGNILFFKTVEGVRYGEKVVIRTDNRDITGKVSVLTEDITVIEILGESSGINPQDVRVRFTGEPFKIPVSEGMLGRILDPFGNPLDELGSIIPEAFLDISGEAYNPSKRLYPEEIIYTGISSIDGLNTLVKGQKLPVFAVSGVPTDQLVAQIVRQIKTGSENRATVLCAVGVKYETANYLIEDITSGGNFPKTAVFLNLADEPPVNSLISVRSALTLSEFLAFEKGYDVVVVIYDMTNYCDALREISSKRGEIPGRKGYPGYMYSDLASIYERAGVLKGMKGSVTQIPVLTMPDDDITHPIPDLTGYITEGQIVLDRSLHQRGVYPPVNVLPSLSRLMNRAVDDLHKRWANQIYSAYAKAKRVEMLASIVGETEISEIERTYLDFGRRFEELFIKQGRYEDRTLEETLSIGWDLLKLLPESELVRLKKEDIERFIK
SIO_010081: PERMA_RS00190
subclass of: SO_0000673
so part of: PERMA_RS00190
location: 37482..38825
location: region:37482-38825:1
so has part: feature:37482-38825:1:exon

WP_012676396.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37482-38825:1:exon

PERMA_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00195
old locus tag: PERMA_0040
so part of: sequence
location: 38822..39439
location: region:38822-39439:1
so has part: feature:38822-39439:1:exon
subclass of: SO_0000010

position:38822:1
position: 38822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39439:1
position: 39439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38822-39439:1:exon

PERMA_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00195
old locus tag: PERMA_0040
inference: COORDINATES: protein motif:HMM:TIGR00309.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: V-type ATP synthase subunit D
translation: MIRYTKNKTDLLELKKELSIIKDGKDILEQKRDILLKEILSIIDQVEAYRKRLNEVVQKSYNLLIKAYMEAGKDYVLRESKISVFKGDLKIYEKSFMGIPIPEVKYKVYRVKTPLNPVSEYIFVDLARNSFMEAVRLILEVASTEIKAWKLAEELKKTVVRVNALEHFYIPEYEKAVKEISDSLEEMERELLILIKNLGSEELTF
SIO_010081: PERMA_RS00195
subclass of: SO_0000673
so part of: PERMA_RS00195
location: 38822..39439
location: region:38822-39439:1
so has part: feature:38822-39439:1:exon

WP_015898846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38822-39439:1:exon

PERMA_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00200
old locus tag: PERMA_0041
so part of: sequence
location: 39512..41164
location: region:39512-41164:1
so has part: feature:39512-41164:1:exon
subclass of: SO_0000010

position:39512:1
position: 39512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41164:1
position: 41164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39512-41164:1:exon

PERMA_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00200
old locus tag: PERMA_0041
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675034.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S1 RNA-binding domain-containing protein
translation: MENFQSEFEKLLEESQDIPYYSKGERVTGVIVRIQDDYAFVDVGQKTEVVIDKNEINGLSEGDQITAVYLGRRNKDGYLVISRRPLIFSEALQRVEDAFSKGEKIGAKLDKKINKGFLVDLGGVKAFLPYSESGLRRDEELPPPEFDVYILRIDRDRKPPGIVVSRKKVLDEEIKRKRDEIFSLLEEGKQVRGRVEKVQENGAVLSLERIVFGFLPRSLYSWDRDRSISELSVGDEIDLVVKSIDRENQKIIFSKRDLEPDPWKTFDKEVGDQIEVEIKDINDFGLIVKTGALEGFIHKSETSHLRPENYKNSFRKGQKVKAKIIELDRENRRLKLSIKALHPHPVDKFLEENPEGSVVEGKIKEIRNKIAFVDLGKDVEGVIHLEDATWNPKIKNIGQVLKGKRLREFKVLGREKDKVRLGIKQFRDNPWEEFFSKHSVGDVIKAKVKKLIDRGAFVDINEDVEGFIPLSEISKEKIEIPSDKLSLGQEIEAKIIKIKGHDIILSIKALEKDKEKKEIEEVMRKVKPKGEGLATLGELLKEKLKGENKA
SIO_010081: PERMA_RS00200
subclass of: SO_0000673
so part of: PERMA_RS00200
location: 39512..41164
location: region:39512-41164:1
so has part: feature:39512-41164:1:exon

WP_012676834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39512-41164:1:exon

PERMA_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00205
old locus tag: PERMA_0042
so part of: sequence
location: 41161..42159
location: region:41161-42159:1
so has part: feature:41161-42159:1:exon
subclass of: SO_0000010

position:41161:1
position: 41161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42159:1
position: 42159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41161-42159:1:exon

PERMA_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00205
old locus tag: PERMA_0042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459827.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium:calcium antiporter
translation: MILDILLLVLGLGIILVAAELFTNGIETIGHRLQFSQNFTGSVLAAVGTALPESILPVIAIIFFADNAGHEIGIGAILGAPFMLSTLAIPLIGLTVLLRYFIKKGDLSLNLEEVGLRRDIVFFLFAYSVALFIVPYEIYILKVFTAFFLLSLYVLYVYLTLRGESEDMEETEHLYFAPKNPHPHILIAVVQSVFALVIMVIGAHLFVHGIEHISTAFGFSPLLFSLLLAPVATELPEKVNSVLWVFRGKDTLAVGNVSGAMVFQSTIPVSFGIIFTDWNIEGLALVSGVFAIIAGFLVLVLSYVNKKLVPFGFSLGMIFYVTYFYLTVTSMG
SIO_010081: PERMA_RS00205
subclass of: SO_0000673
so part of: PERMA_RS00205
location: 41161..42159
location: region:41161-42159:1
so has part: feature:41161-42159:1:exon

WP_012675882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41161-42159:1:exon

PERMA_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00210
old locus tag: PERMA_0043
so part of: sequence
location: 42164..43108
location: region:42164-43108:1
so has part: feature:42164-43108:1:exon
subclass of: SO_0000010

position:42164:1
position: 42164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43108:1
position: 43108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42164-43108:1:exon

PERMA_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00210
old locus tag: PERMA_0043
EC number: 6.4.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459828.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase carboxyltransferase subunit alpha
translation: MDIDKEIQILSDKIKILRQELKKGNRSVLKELVESRKKFKKLAREKQKKLSAWERVQLARHPKRPHTIDYIKNIFTDFVELHGDRRFGDDKAIIAGFAFFEGIPVAVIGHEKGKDTKEKIERNFGMPHPEGYRKAIRIMKLAEKFRRPVLTFIDTPGAYPGIGAEERGQSQAIAESIMVMGSLKTPIIATVIGEGGSGGALALGVADKVLMLENSIYSVISPEGCAAILFKSQEKAPEAAESLKITAKDLKELGIIDCIVPEPLGGAHLQPEKMYRLMKRAIRSTLRMLMDKDPEKLVEERQSKFYSMGKFVEK
SIO_010081: PERMA_RS00210
subclass of: SO_0000673
so part of: PERMA_RS00210
location: 42164..43108
location: region:42164-43108:1
so has part: feature:42164-43108:1:exon

WP_012675597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42164-43108:1:exon

PERMA_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: waaF
locus tag: PERMA_RS00215
old locus tag: PERMA_0045
so part of: sequence
location: 43105..44103
location: region:43105-44103:1
so has part: feature:43105-44103:1:exon
subclass of: SO_0000010

position:43105:1
position: 43105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44103:1
position: 44103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43105-44103:1:exon

PERMA_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: waaF
locus tag: PERMA_RS00215
old locus tag: PERMA_0045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547091.1
GO function: GO:0008920 - lipopolysaccharide heptosyltransferase activity [Evidence IEA]
GO process: GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide heptosyltransferase II
translation: MKIVVWQTAFLGDLILTTPLIKSLKNLYPESQIHLISKPFGKDVFKGNPYLDELIVFDKKRDSTISLIKRLRREGYDIAISPHRSHRASYVLFLSGIKKRIGFDRAGFSFLYTDKVPHRFDGTHEIKRNLSLLKKLESYDKGKIDSLPELFLSEEEDRFFESFGLEDKKYITIAPGSKWETKRWTEEGFSELIDELVKMGESVVIIGGKEDVQVSKRIVDRLSHKSNVIDLTGSTSLRESFSVVKHSKLLISNDSAPVHIAVSFNTPVVDIYGPTVREFGFYPYRNGVVVEAEGVVCRPCGLHGHRKCPTGTFECMKKITPQKVLKAVKRFL
SIO_010081: PERMA_RS00215
subclass of: SO_0000673
so part of: PERMA_RS00215
location: 43105..44103
location: region:43105-44103:1
so has part: feature:43105-44103:1:exon

WP_012676317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43105-44103:1:exon

PERMA_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00220
old locus tag: PERMA_0044
so part of: sequence
location: complement(44098..44517)
location: region:44098-44517:-1
so has part: feature:44098-44517:-1:exon
subclass of: SO_0000010

position:44098:-1
position: 44098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44517:-1
position: 44517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44098-44517:-1:exon

PERMA_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00220
old locus tag: PERMA_0044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459408.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CBS domain-containing protein
translation: MGIKNVARKEVITASPDTPVKDVAKLMRDKNVGSVVIVENNRPVGIVTDRDIAIRVLGNDQPAEIPVKNIMTENPVTLKEDEGIFEALERVKDVGVRRFPVVDNDGNLTGIVTIDDFVYLLGKEMSDIATIIEKEAPNL
SIO_010081: PERMA_RS00220
subclass of: SO_0000673
so part of: PERMA_RS00220
location: complement(44098..44517)
location: region:44098-44517:-1
so has part: feature:44098-44517:-1:exon

WP_012676489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44098-44517:-1:exon

PERMA_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00225
old locus tag: PERMA_0047
so part of: sequence
location: 44591..45796
location: region:44591-45796:1
so has part: feature:44591-45796:1:exon
subclass of: SO_0000010

position:44591:1
position: 44591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45796:1
position: 45796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44591-45796:1:exon

PERMA_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00225
old locus tag: PERMA_0047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008289194.1
GO function: GO:0004180 - carboxypeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amidohydrolase
translation: MGDIKEEIKDLAESIKDQIVQWRRRIHMYPEISSEEYRTSEFVAEKLEEFGVDKVIRNFGGTTAVVGIIKGQEDITVALRADMDALPMEEKTGKEYSSKIKGVMHSCGHDAHTAMLLGAAKVLVQIKDKLKGNVKLIFQPCEERQDCRGARTLVQKGVLKDPDVSAIFGLHVFPELPAGVFGTKEGHFLASSDVFRIKIIGKGTHASRPHKGVDPVLVSAQVINALHHIVSRKVDPLHPAVLTIGKIKGGFAENIIPEVVEMEGTVRTLSLDLRDMIPVWIEDTIKGVTSAYGARYEFSFKEGNPPVINDRLTTRFTFSMLKDLFGDDRVVELENPTMGGEDFSEYLMKVPGTFIRLGIRNEKKGITAPLHSPLFDVDEDVLPDGSSALAYLAYRWLEEHS
SIO_010081: PERMA_RS00225
subclass of: SO_0000673
so part of: PERMA_RS00225
location: 44591..45796
location: region:44591-45796:1
so has part: feature:44591-45796:1:exon

WP_015898929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44591-45796:1:exon

PERMA_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00230
old locus tag: PERMA_0046
so part of: sequence
location: complement(45793..47067)
location: region:45793-47067:-1
so has part: feature:45793-47067:-1:exon
subclass of: SO_0000010

position:45793:-1
position: 45793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47067:-1
position: 47067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45793-47067:-1:exon

PERMA_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00230
old locus tag: PERMA_0046
inference: COORDINATES: protein motif:HMM:NF024571.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MTELFKKLITDFQERDLNFIERDYNIPINSKKIISLIGVRRSGKTYILYQIISKLRKKGLNRNIIYISFEDERLTGLSYRNLNEIIEAYFELFPEKRDEKIYIFFDEIQEVKHWEKFVRRIYDSLNANIFLTGSSSKLLSKEIATSLRGRTITYEIFPLSFKEYLKFRDIQINLYSSKSISFIKKNLENYLLQGGFPEIALEENEDVIVRTLRDYVDLIVYRDVIERYGIKNLSLLKLLIKYIFSNPATLISISKLYNDFKSMGYKLSKDTLFEYFEYLSDAYTLFTTSIFRSSVKEEQRNPKKVFIIDNGFNYIYNTSFSPDYSKLYENSVFLHLRRKYPEIYYFKEKKEVDFYIPAERLLINVSYDISERKTFQREINSLIEGMRYLNLKKAYLVTSDREKEIEIDGYKIYIKPLWKWLLSY
SIO_010081: PERMA_RS00230
subclass of: SO_0000673
so part of: PERMA_RS00230
location: complement(45793..47067)
location: region:45793-47067:-1
so has part: feature:45793-47067:-1:exon

WP_012675491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45793-47067:-1:exon

PERMA_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00235
so part of: sequence
location: 47294..47662
location: region:47294-47662:1
so has part: feature:47294-47662:1:exon
subclass of: SO_0000010

position:47294:1
position: 47294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47662:1
position: 47662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47294-47662:1:exon

PERMA_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00235
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRNLVVAVLCFSIYTGLSMAHEDVGDTNEMETQMHKSHFSQKGMGMHGGMGMMQIMMMDPEIKKIMMKHMRECKKQVMKKMMGDQMVLKRMIRMLVMNKDTEKEILKENPDLKEEIKSMLK
SIO_010081: PERMA_RS00235
subclass of: SO_0000673
so part of: PERMA_RS00235
location: 47294..47662
location: region:47294-47662:1
so has part: feature:47294-47662:1:exon

WP_041530847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47294-47662:1:exon

PERMA_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00240
old locus tag: PERMA_0049
so part of: sequence
location: 47734..49431
location: region:47734-49431:1
so has part: feature:47734-49431:1:exon
subclass of: SO_0000010

position:47734:1
position: 47734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49431:1
position: 49431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47734-49431:1:exon

PERMA_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00240
old locus tag: PERMA_0049
inference: COORDINATES: protein motif:HMM:TIGR01480.1
GO function: GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]
GO process: GO:0006825 - copper ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper resistance system multicopper oxidase
translation: MRLNRRDLLKLSASSFALGLLGKPVPLFAASRGFHIADRKETDTTVEYEIVIKKERIPIGDKKGTAFLFNDNFPAPLIRLKEGKQAVIKVFNETDESTSIHWHGLILPNDMDGVPGVTYRGILPKSSFVYSFPVIQSGTYWYHSHTGLQEQQGHYGPLIIDPKDPEPFEYDRDYVVQLSDWTYEDPDEVLLHLKKWDGYYNYQKRTVFDLYEDIKEKGFQNTLRERLMWAKMRMNPRDISDITASTFIYLINGLTKEENPTFIFKKGERVRLRFINAAASTYFDVRIPGLKMRVVQADGQSIEPVDIDEFRIAIAETYDVIVQPEENIPYTIFAETMDRSGYTRATLSPDRGLQAPIPKRRPPSTRGMKAMGMSHSMKSKGLCGECELISDPTREIFGADAAMIQKSPICRIDDPGVGFEGVDHKVLTYADLRSIEPFERRKPTRQIDIHLVGNMERYIWKMYSYDGKRWSSEFHQLIKARYNERIRIVFINHTMMDHPIHLHGMWMYLQNNSGEYSPRKHTVNIKPAEKLCVEIDNDALGNWAFHCHIMYHMHTGMFRVLQVCK
SIO_010081: PERMA_RS00240
subclass of: SO_0000673
so part of: PERMA_RS00240
location: 47734..49431
location: region:47734-49431:1
so has part: feature:47734-49431:1:exon

WP_012675937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47734-49431:1:exon

PERMA_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00245
old locus tag: PERMA_0050
so part of: sequence
location: 49444..50175
location: region:49444-50175:1
so has part: feature:49444-50175:1:exon
subclass of: SO_0000010

position:49444:1
position: 49444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50175:1
position: 50175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49444-50175:1:exon

PERMA_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00245
old locus tag: PERMA_0050
inference: COORDINATES: protein motif:HMM:NF017119.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper resistance protein B
translation: MFKRLLISIGLISFLYGVSNAEPSEDCDFYPVKKMKPLYYGQILFDRLEYDDSKRLNYEVTSWYGGDYQRFWIEVEGENNFEKEEGDLERLDVLYGKLFSPFWDIRAGVGYRSSYGDGTKDRKSFVVGLKGLAPYWFEVDTNMRFTTEGELYGDVEAEYDLLFTQRLVFQPRIDTTFSFSDIPEIGVYNGINNINLSFRLRYELKREFAPYIGFSYNSFFGDIKDRNGKDHDLTAFFGVRVWF
SIO_010081: PERMA_RS00245
subclass of: SO_0000673
so part of: PERMA_RS00245
location: 49444..50175
location: region:49444-50175:1
so has part: feature:49444-50175:1:exon

WP_012676859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49444-50175:1:exon

PERMA_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rplU
locus tag: PERMA_RS00250
old locus tag: PERMA_0051
so part of: sequence
location: 50271..50564
location: region:50271-50564:1
so has part: feature:50271-50564:1:exon
subclass of: SO_0000010

position:50271:1
position: 50271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50564:1
position: 50564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50271-50564:1:exon

PERMA_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rplU
locus tag: PERMA_RS00250
old locus tag: PERMA_0051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676185.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L21
translation: MFAVIKTGGKQYRVEPGMLLKVEKLPADVGETVEIEASLIKDDQGNIKTEGKVEAEVVEHGKHKKVLVFHFKRKKNYKKLNGHRQPYTLIKIKDIKA
SIO_010081: PERMA_RS00250
subclass of: SO_0000673
so part of: PERMA_RS00250
location: 50271..50564
location: region:50271-50564:1
so has part: feature:50271-50564:1:exon

WP_012676185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50271-50564:1:exon

PERMA_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpmA
locus tag: PERMA_RS00255
old locus tag: PERMA_0052
so part of: sequence
location: 50580..50837
location: region:50580-50837:1
so has part: feature:50580-50837:1:exon
subclass of: SO_0000010

position:50580:1
position: 50580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50837:1
position: 50837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50580-50837:1:exon

PERMA_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpmA
locus tag: PERMA_RS00255
old locus tag: PERMA_0052
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015898935.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L27
translation: MASKKSGGSAKNGRDSFSKRLGVKRYDGQVVKAGNILVRQRGTKIYPGKNVGLGNDYTLFALIDGKVKFETSKGKKVVSVYPLDA
SIO_010081: PERMA_RS00255
subclass of: SO_0000673
so part of: PERMA_RS00255
location: 50580..50837
location: region:50580-50837:1
so has part: feature:50580-50837:1:exon

WP_015898935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50580-50837:1:exon

PERMA_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rodA
locus tag: PERMA_RS00260
old locus tag: PERMA_0053
so part of: sequence
location: complement(50859..51953)
location: region:50859-51953:-1
so has part: feature:50859-51953:-1:exon
subclass of: SO_0000010

position:50859:-1
position: 50859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51953:-1
position: 51953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50859-51953:-1:exon

PERMA_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rodA
locus tag: PERMA_RS00260
old locus tag: PERMA_0053
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675081.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein RodA
translation: MKNIKTFFSRYDPVILFTVLGLLTWSVINIYSATFHEYSSLYIKQAVYALIGTFIILIFPSLDYRKLLNAAPYLYITGILLLIAVIFFGTTILGAKRWIKLGFFMIQPSEMMKFIIILMVAYILENSKRVSFIEGLKIFVLSTIPFILILKQPDLGTAITVLIPVVIILFLANLNKKYIIATLSVLVLSAPFIWEHLKDYQKKRILAFLNPEADPFGTAYHILQSKIAIGSGYIFGKGYLQGTQSKLFFLPEQHTDFIFATIGEEWGFVVSITILTAYLILGLRILYLGSKIKYYGGKYICYGAGGLITVQAFINIAMTVGLAPVVGITLPFLSYGGSSVVTFSLIVGTVLSVIYTHKRERLHF
SIO_010081: PERMA_RS00260
subclass of: SO_0000673
so part of: PERMA_RS00260
location: complement(50859..51953)
location: region:50859-51953:-1
so has part: feature:50859-51953:-1:exon

WP_012676501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50859-51953:-1:exon

PERMA_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: mrdA
locus tag: PERMA_RS00265
old locus tag: PERMA_0054
so part of: sequence
location: complement(51940..53733)
location: region:51940-53733:-1
so has part: feature:51940-53733:-1:exon
subclass of: SO_0000010

position:51940:-1
position: 51940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53733:-1
position: 53733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51940-53733:-1:exon

PERMA_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: mrdA
locus tag: PERMA_RS00265
old locus tag: PERMA_0054
EC number: 3.4.16.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674134.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein 2
translation: MRIDRFNLLVIAFLLVFLILAGRLVYLQILKGTYYRELSEKNHLRLITLNPPRGKIYDRNGILLAYDEPSYNLYVFPYIVKKNLPELKKNLKKILGIDLDEKTEERIKKGFARKVIIKKDLSEKSIKIFFNYSYLFNGLFIEVQPKRVYTEYAKYMPHLLGYVGYPSEKDLREDPSLSPDMLIGKQGVEKIYDRYLRGKYGVKAVVVDALGRLKKVLWEIQPKRGNDIYLTIDARIQKIAYEAFKNSGQKSGAVIIVNPQNYEILALLSYPLYNIQKFSDGLTKKEWNKLIKNKYKPLFNKALSGIYPPGSIFKIIVGLAALQEGVVSPYQKIYSGGSFEIGNWVYRNWDPSGCGSIDVRQALEMSCDTYFYQIGLDLGATKISYYASLFGLGEKLNPEIEKRRSRVPVPEWKMSAIGEPWFLGDTVNYSIGQGFLAITPFDGIKIISPIANGGKVYKPKLLKSYFDMDLQELVETKPELIRVLDIKKDYIKVIKKGLYLVVYGKKGTARKLSDLPVKNAGKTGTAQVFRKPEKNKKIDRWDLQNHAWYVAFFPYKKPRFALSVFVEHGIGGSKTAVPITKSIIMKLYKEGLINEKH
SIO_010081: PERMA_RS00265
subclass of: SO_0000673
so part of: PERMA_RS00265
location: complement(51940..53733)
location: region:51940-53733:-1
so has part: feature:51940-53733:-1:exon

WP_012675638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51940-53733:-1:exon

PERMA_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: mreD
locus tag: PERMA_RS00270
old locus tag: PERMA_0055
so part of: sequence
location: complement(53714..54169)
location: region:53714-54169:-1
so has part: feature:53714-54169:-1:exon
subclass of: SO_0000010

position:53714:-1
position: 53714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54169:-1
position: 54169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53714-54169:-1:exon

PERMA_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: mreD
locus tag: PERMA_RS00270
old locus tag: PERMA_0055
inference: COORDINATES: protein motif:HMM:TIGR03426.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreD
translation: MRIYILALVLLILQSSIVIKNLSVMNFTPDFLVILIILYTLNHGLKDSLKFSIFVGILQDMLNPVPTAFNLISKLLLTLATFSVKNRFFLGDIFIRSILIILLSVMDITVKILLTFLKTGIFYINVSFFAYVFLNFLIFYIVQIINENRQI
SIO_010081: PERMA_RS00270
subclass of: SO_0000673
so part of: PERMA_RS00270
location: complement(53714..54169)
location: region:53714-54169:-1
so has part: feature:53714-54169:-1:exon

WP_041530848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53714-54169:-1:exon

PERMA_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: mreC
locus tag: PERMA_RS00275
old locus tag: PERMA_0056
so part of: sequence
location: complement(54166..54981)
location: region:54166-54981:-1
so has part: feature:54166-54981:-1:exon
subclass of: SO_0000010

position:54166:-1
position: 54166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54981:-1
position: 54981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54166-54981:-1:exon

PERMA_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: mreC
locus tag: PERMA_RS00275
old locus tag: PERMA_0056
inference: COORDINATES: protein motif:HMM:TIGR00219.1
GO process: GO:0008360 - regulation of cell shape [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein MreC
translation: MFKKKGFKRVTLFVVIVLSISVVYLFLIPNSKGAVLTVFHPFLKAVDGVYETFSSVIRSVEDNYRLYRENKELKKEIERLKGEITLLKQYEIENQRLSSIANFKKRFKKYRLLTGKVIGFSPDNWSNFLIINLGKKSGIKKGDLVVSDGYLLGIVYSVGPFSSSVLLVSDKNFRIPARTRKTRELVFFQGKDLKSGVLKYVKPQQDIRIGDIIETTDVGKNYPPGIPIGKIKSINYEEGDFFKNVDIKLDINPLSVEYVVVITKREKSKKR
SIO_010081: PERMA_RS00275
subclass of: SO_0000673
so part of: PERMA_RS00275
location: complement(54166..54981)
location: region:54166-54981:-1
so has part: feature:54166-54981:-1:exon

WP_012675920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54166-54981:-1:exon

PERMA_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00280
old locus tag: PERMA_0057
so part of: sequence
location: complement(54987..56027)
location: region:54987-56027:-1
so has part: feature:54987-56027:-1:exon
subclass of: SO_0000010

position:54987:-1
position: 54987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56027:-1
position: 56027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54987-56027:-1:exon

PERMA_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00280
old locus tag: PERMA_0057
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rod shape-determining protein
translation: MFLNSILGFFSNDIGIDLGTANTLVFVKGKGIVFSEPSIVSIEKTTGKVIAVGEEAKAMIGKTPENIEVVRPLKDGVIADFDVTQEMLKYFIRKVHKNLPLTKFLKPRPRIIVGVPSGITTVEKRAVIDAARQAGARDVFLIAEPMAAAIGAGLPISAPGGNMIVDIGGGTSEIAVISLSGLVLSTSIRIAGDEVNKAIIQHLKRSHHILIGEQTAERVKVQIGSAYPTERDKETMEIRGRDMTGMPRSVTITGEEIRIAIEDVITSIINAVRNALERTPPELAADIVERGIVLAGGGSLLYGMDLRLKEETNLPVYYCDDPLTAVARGIGEALNDIELIKRVSFQ
SIO_010081: PERMA_RS00280
subclass of: SO_0000673
so part of: PERMA_RS00280
location: complement(54987..56027)
location: region:54987-56027:-1
so has part: feature:54987-56027:-1:exon

WP_012675395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54987-56027:-1:exon

PERMA_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: dapA
locus tag: PERMA_RS00285
old locus tag: PERMA_0058
so part of: sequence
location: 56109..56990
location: region:56109-56990:1
so has part: feature:56109-56990:1:exon
subclass of: SO_0000010

position:56109:1
position: 56109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56990:1
position: 56990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56109-56990:1:exon

PERMA_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: dapA
locus tag: PERMA_RS00285
old locus tag: PERMA_0058
EC number: 4.3.3.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546822.1
GO function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-tetrahydrodipicolinate synthase
translation: MFKGSIVALITPFKDGAIDRKSLKRLIDFHVEKGTDGIVIAGTTGESATLTFSEHEDLIKMAVEFADKRIPIIAGTGANATHEAIALTKSAEKAGADGSLQIVPYYNKPTQEGIYQHFKAIAEETSIPLILYNIPSRTGVDMLPETFARLYSDFPNVIGIKEATGNVARVSEMISLTNPDVVILSGDDALTLPMMAVGAKGVISVANNLVPEDIATMCRLALEGRFEEARQIHDRYWKLFKTLFIETNPIPVKTAAYLMGLIDDIEMRLPLYYMKPENEEKLKSVLKDYGLIR
SIO_010081: PERMA_RS00285
subclass of: SO_0000673
so part of: PERMA_RS00285
location: 56109..56990
location: region:56109-56990:1
so has part: feature:56109-56990:1:exon

WP_012675960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56109-56990:1:exon

PERMA_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00290
old locus tag: PERMA_0059
so part of: sequence
location: 57112..57927
location: region:57112-57927:1
so has part: feature:57112-57927:1:exon
subclass of: SO_0000010

position:57112:1
position: 57112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57927:1
position: 57927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57112-57927:1:exon

PERMA_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00290
old locus tag: PERMA_0059
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674833.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Gfo/Idh/MocA family oxidoreductase
translation: MRVGIVGTGNMGSKYIKKFEILGYDAVLIDKEQSRLKDFPERFKKYTDIDEALKNENIDFLFVATDPVSHIPIAKKALERGINVMVEKPPSIKPSELEDAINFAYKNNAVLEVSEIELRSNSIRNLDIGSSVDQVQAYRLNLGRGYINPFYDLAWHDLYIFSYLFGEFSIKSVKDKGDIFDIYGETEENEFFLQVAWSHDYLRREWILRSKEGEIKLNFVEDRIEYPSGKVKEKDNIDKLELMIKQFVQNPSFESSFRALNILKEFDKFRV
SIO_010081: PERMA_RS00290
subclass of: SO_0000673
so part of: PERMA_RS00290
location: 57112..57927
location: region:57112-57927:1
so has part: feature:57112-57927:1:exon

WP_012675678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57112-57927:1:exon

PERMA_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00295
old locus tag: PERMA_0060
so part of: sequence
location: 57939..58997
location: region:57939-58997:1
so has part: feature:57939-58997:1:exon
subclass of: SO_0000010

position:57939:1
position: 57939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58997:1
position: 58997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57939-58997:1:exon

PERMA_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00295
old locus tag: PERMA_0060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459955.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegT/DnrJ/EryC1/StrS family aminotransferase
translation: MIPIIKPVFGKEEEDTVLEIMKSGQITRGRWTLKFKESFSDYIGSTFCHPVCSGTAALYIALKAVGVSSPEDVVIVPAMSFMATIDAVLLAGGKPVVVDVGDDYCMDPEQLEEAVEKYRPKVVIPVHLFGQTADMDRIKEICRENDVIVLEDAAQAHGAEYKGKKAGNLGDLSAFSFYASKNVAMGEGGAILTSDPEIDEKISNWIEFGDHPALNLRITEFQAGIGYWQLQKLDDTNEKRRKIAKLYNREFRDLPALKLPEELDGRKHVFHIYALRHPKRDQILERLIEKGIGARVYYDYTLHQLRNAEHLDCGFSEKVVKEIFAIPVHAALKEDEIAYIVDTVKKVVKDLS
SIO_010081: PERMA_RS00295
subclass of: SO_0000673
so part of: PERMA_RS00295
location: 57939..58997
location: region:57939-58997:1
so has part: feature:57939-58997:1:exon

WP_012675336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57939-58997:1:exon

PERMA_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ribE
locus tag: PERMA_RS00300
old locus tag: PERMA_0061
so part of: sequence
location: 59041..59505
location: region:59041-59505:1
so has part: feature:59041-59505:1:exon
subclass of: SO_0000010

position:59041:1
position: 59041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59505:1
position: 59505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59041-59505:1:exon

PERMA_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ribE
locus tag: PERMA_RS00300
old locus tag: PERMA_0061
EC number: 2.5.1.78
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676400.1
GO component: GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6,7-dimethyl-8-ribityllumazine synthase
translation: MTEINGNLSAEGLNFCIVVGRFNDLITNKLLEGAIDCIVRHGGSEDNITVVRVPGSFEIPLIAKKVAKTGKYDAVICLGAVIRGSTPHFEYVAAEVTKGIALVSLETEIPVSYGILTTDTIEQAVERAGTKMGNKGFDAALSAIEMANLIKEIR
SIO_010081: PERMA_RS00300
subclass of: SO_0000673
so part of: PERMA_RS00300
location: 59041..59505
location: region:59041-59505:1
so has part: feature:59041-59505:1:exon

WP_012676400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59041-59505:1:exon

PERMA_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: nusB
locus tag: PERMA_RS00305
old locus tag: PERMA_0062
so part of: sequence
location: 59505..59933
location: region:59505-59933:1
so has part: feature:59505-59933:1:exon
subclass of: SO_0000010

position:59933:1
position: 59933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59505-59933:1:exon

PERMA_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: nusB
locus tag: PERMA_RS00305
old locus tag: PERMA_0062
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676034.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription antitermination factor NusB
translation: MGKYRKKAREIVFRTLYTYDIKGGDLFEIMEDHIKDIRGKLSKKTVDYIYSILKGIDEHLPEIDDILRENLKNWRLERLGYPERALLRLGVYELLFSDIEDKGRVFMDILDLTKCYIDNPDTVKFINGVLSTVYKNRQKVNQ
SIO_010081: PERMA_RS00305
subclass of: SO_0000673
so part of: PERMA_RS00305
location: 59505..59933
location: region:59505-59933:1
so has part: feature:59505-59933:1:exon

WP_012676034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59505-59933:1:exon

PERMA_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00310
old locus tag: PERMA_0064
so part of: sequence
location: 59930..60658
location: region:59930-60658:1
so has part: feature:59930-60658:1:exon
subclass of: SO_0000010

position:59930:1
position: 59930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60658:1
position: 60658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59930-60658:1:exon

PERMA_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00310
old locus tag: PERMA_0064
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase family protein
translation: MRTAYISDIHGNIHAVESLERDLKDQGVERIICLGDILNFGANPKEVLEWVRENCHTVLRGEHDTFVSQCEDIFITNPEAIKMADWTYDQITDEDREYIASLPKDGEVEGFIITHDEPSVPGSMYFITSLKDAKDTFPCFSEQICFYGHTHIPLIFVKDKDSIKLIRDVSECRIEEGKQYLISVGSVGQPRDRDPRLSYIIHDEDKKKVLVRRVEYDYEKAAKEILNKGLPTLFAAAITKKL
SIO_010081: PERMA_RS00310
subclass of: SO_0000673
so part of: PERMA_RS00310
location: 59930..60658
location: region:59930-60658:1
so has part: feature:59930-60658:1:exon

WP_012675795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59930-60658:1:exon

PERMA_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00315
old locus tag: PERMA_0063
so part of: sequence
location: complement(60645..60827)
location: region:60645-60827:-1
so has part: feature:60645-60827:-1:exon
subclass of: SO_0000010

position:60645:-1
position: 60645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60827:-1
position: 60827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60645-60827:-1:exon

PERMA_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00315
old locus tag: PERMA_0063
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLLIKQCLNCSNITEFGKCDGGYELRWRVENAFEKLVCENFVKIDNSPENDKIEDVAKAS
SIO_010081: PERMA_RS00315
subclass of: SO_0000673
so part of: PERMA_RS00315
location: complement(60645..60827)
location: region:60645-60827:-1
so has part: feature:60645-60827:-1:exon

WP_015899038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60645-60827:-1:exon

PERMA_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: yajC
locus tag: PERMA_RS00320
old locus tag: PERMA_0065
so part of: sequence
location: complement(60918..61211)
location: region:60918-61211:-1
so has part: feature:60918-61211:-1:exon
subclass of: SO_0000010

position:60918:-1
position: 60918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61211:-1
position: 61211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60918-61211:-1:exon

PERMA_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: yajC
locus tag: PERMA_RS00320
old locus tag: PERMA_0065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673495.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit YajC
translation: MQGDPVGGLISAIIWMVLLIAIFYFLLYRPQQQQRKKHEEFLKNLKKGEKVITSGGIIGEIKSIDEKTVSLKISEGTIIKVLKTAISTYYQEEEKKD
SIO_010081: PERMA_RS00320
subclass of: SO_0000673
so part of: PERMA_RS00320
location: complement(60918..61211)
location: region:60918-61211:-1
so has part: feature:60918-61211:-1:exon

WP_012675450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60918-61211:-1:exon

PERMA_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00325
old locus tag: PERMA_0066
so part of: sequence
location: 61372..62529
location: region:61372-62529:1
so has part: feature:61372-62529:1:exon
subclass of: SO_0000010

position:61372:1
position: 61372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62529:1
position: 62529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61372-62529:1:exon

PERMA_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00325
old locus tag: PERMA_0066
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKILIILLITVGLSFGLTEQEKDRLLMLIQGLYKDKVYSLAAKKAQEYLDKTDPDDPYREKVFILQLQAYIKEGNKEKVLSMIDRVNSYNFSEETKKRVYATVLSFFEKNPDEKAEVLKRIIRYTEGYERKKLLEKLAAIYYKNKRWAKILELPPEKELNLLKLIALYKMGRYMDVIKETERMEKYLPDQKDDVLYYRALAFFKLGREDKAASYMEAITFKTPEVIKFLSGYYFKRKKYLIAEKYLRLLTLEKGYKDYAFYMLGVIEDQGKRYKKAAEYYKKASEFKTRYGDLARKRILQLKKAGVIDTEGKTYYSVRVILFYSEKRAKKFIKRYGLEECFTKPYKKYIAVYCGMYQTKKEAVKEKKRLMEKGLKDVIIEKIKI
SIO_010081: PERMA_RS00325
subclass of: SO_0000673
so part of: PERMA_RS00325
location: 61372..62529
location: region:61372-62529:1
so has part: feature:61372-62529:1:exon

WP_012676049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61372-62529:1:exon

PERMA_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00330
old locus tag: PERMA_0067
so part of: sequence
location: 62597..62926
location: region:62597-62926:1
so has part: feature:62597-62926:1:exon
subclass of: SO_0000010

position:62597:1
position: 62597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62926:1
position: 62926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62597-62926:1:exon

PERMA_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00330
old locus tag: PERMA_0067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545826.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H-dependent oxidoreductase subunit E
translation: MSAEFKHVFVCLQRKPPGMPNCGEKGADMIFQKFQEELMMKNLFDKMAVTPTGCMGPCMMGPTVVVYPDAVWYGNVKPEDVPEIIEKHILGGEPVERLVTSKGKPPATF
SIO_010081: PERMA_RS00330
subclass of: SO_0000673
so part of: PERMA_RS00330
location: 62597..62926
location: region:62597-62926:1
so has part: feature:62597-62926:1:exon

WP_012675239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62597-62926:1:exon

PERMA_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: metF
locus tag: PERMA_RS00335
old locus tag: PERMA_0068
so part of: sequence
location: complement(62948..63829)
location: region:62948-63829:-1
so has part: feature:62948-63829:-1:exon
subclass of: SO_0000010

position:62948:-1
position: 62948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63829:-1
position: 63829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62948-63829:-1:exon

PERMA_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: metF
locus tag: PERMA_RS00335
old locus tag: PERMA_0068
EC number: 1.5.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674867.1
GO function: GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO process: GO:0009086 - methionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methylenetetrahydrofolate reductase [NAD(P)H]
translation: MKIGEILKHINTSISFEFFPPKTPEGEDQLFRTIKDLEKLNPTFVSVTYGAGGSTRERTIRVVKRIHEQCNLTVMAHLTCIGHSKKEIYDILKGYKDIGIQNILALRGDIPQGQEESFVFPPDGCRYANELVSFIREQFGDYFSIGVAAYPEGHPESPSLEKDIYYFKKKVEAGAEFAITQMFFDNSYFYRYMDLLSKEGINIPVIPGIMPITNFRQIEKFAVMCGATIPKDLVEKLEKVENSPEEVAKIGIDYATEQCEDLLKNGVKGLHFYTLNKSKATVEIYRRIKDLIK
SIO_010081: PERMA_RS00335
subclass of: SO_0000673
so part of: PERMA_RS00335
location: complement(62948..63829)
location: region:62948-63829:-1
so has part: feature:62948-63829:-1:exon

WP_012676291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62948-63829:-1:exon

PERMA_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rny
locus tag: PERMA_RS00340
old locus tag: PERMA_0069
so part of: sequence
location: complement(63893..65554)
location: region:63893-65554:-1
so has part: feature:63893-65554:-1:exon
subclass of: SO_0000010

position:63893:-1
position: 63893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65554:-1
position: 65554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63893-65554:-1:exon

PERMA_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rny
locus tag: PERMA_RS00340
old locus tag: PERMA_0069
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015419469.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease Y
translation: MVEIVVGISALAVGTAAGFAACKATVGKTLKEKERKAEEIIKNKEEIEREARRKAEEIIKEFEAEAKRKAEEIVREAESLKQQQEIIIEKEILKRKQELEKELKSEREELQNLEKTLMSREAQLEKRLARLEHREEELDKKWDEIKKLEEEIRSIQKEIEEKEAKLKAAEEQYMLELQRIASMTKEEAREELLRKVEEEAKLEAAKLMKEIEEEARKEAEKEAKWNLVTAIQRLAPEITTSHTISVVDLPSNDLKGRIIGREGRNIRAFEMETGVDLIIDDTPDIVTISSFDPLRREIAKRSLERLIADGRIHPGRIEEIVTKVKDEMESHIRKLGEETCLELGFTDVHPELFYYIGKLYYRTSYTQNVLLHTKEVAHLAGIMAAELGLDEKAAKRGGLMHDVGKSISHEVGGSHSKVGAELAKRYGEPDVVINAILYHHNDEPARYPEAVLVAAADALSAARPGARREALQSYINRLEKIEAIVNSFENVEKSFAIQAGREVRIIVNAEKLSDEEAYMLTKEIAKRIEKEVEFPGQIKITTIRESRFIEVAK
SIO_010081: PERMA_RS00340
subclass of: SO_0000673
so part of: PERMA_RS00340
location: complement(63893..65554)
location: region:63893-65554:-1
so has part: feature:63893-65554:-1:exon

WP_012675875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63893-65554:-1:exon

PERMA_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00345
old locus tag: PERMA_0070
so part of: sequence
location: complement(65558..66106)
location: region:65558-66106:-1
so has part: feature:65558-66106:-1:exon
subclass of: SO_0000010

position:65558:-1
position: 65558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66106:-1
position: 66106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65558-66106:-1:exon

PERMA_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00345
old locus tag: PERMA_0070
EC number: 6.3.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674152.1
GO function: GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO process: GO:0006730 - one-carbon metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-formyltetrahydrofolate cyclo-ligase
translation: MKQRVREELLQKRRRYEKAEEDALKIKDRFLQLEEVQRANSILLYYPHKNEVNTLPIIEELLKTKKVVLLPKVKDHDIIPIQISDLSGLKRGYAGILEPEGEAFPVEDIDIVVVPAVAYDLRGHRLGYGKGYYDRLLKRIKGLKVGLAYDFQVVEKLPVESHDVPVDLIITPTRTINTKGGM
SIO_010081: PERMA_RS00345
subclass of: SO_0000673
so part of: PERMA_RS00345
location: complement(65558..66106)
location: region:65558-66106:-1
so has part: feature:65558-66106:-1:exon

WP_012676412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65558-66106:-1:exon

PERMA_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: pheT
locus tag: PERMA_RS00350
old locus tag: PERMA_0071
so part of: sequence
location: complement(66358..68769)
location: region:66358-68769:-1
so has part: feature:66358-68769:-1:exon
subclass of: SO_0000010

position:66358:-1
position: 66358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68769:-1
position: 68769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66358-68769:-1:exon

PERMA_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: pheT
locus tag: PERMA_RS00350
old locus tag: PERMA_0071
EC number: 6.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674965.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit beta
translation: MRVPYSWIKEFIDIDIPAEEVVERLNTTGIEAVCETFGEYIEGIVTVKILSVKKHPERDKLLVCEATDGHKVYQVVTGADNVKEGSTVILAKEGSVIKGIKITKRNFGSIQSEGMFLSLEELGISEKSEGVLILPDDIKPGEDPNRILGLGDEKIIEIEITPNRGDALSVRGLAREIGAIFGIKRKEVFPVISIAEEIIPEIFVNSERCTRYRGIIIKDVNIRPSPFHIQLKLIKSGMNPINNVVDITNYILLQEGQPLHAFDLDKIEGAVYVRNAREGEKIVTLDGEEKQLKETDLVIADDKKVIAIAGVIGGDNTKVDSNTKNILLEAAVFDSISVRKTAKRLAVSTDSSYRFERGVDIQNLPNAQDKAVELILKTAGGKAVGEKDIYPDPYRPEKIKLREKTVERILGVSIPKEECSDLLNRLEIPTEIEEDGTVSQIPSFRAFDLKREIDLVEEVGRLKGFDTFGEKYPRVSVESFRKSDEYLFELRTRDFLKDNGLDEVVTYTFVGEEIFNILGIPVPVIRIENYLLKTQSVMRDNLAVSLIGVFQENLRHQIKDLSVFEISSAFFEEYEEIRVGLLLSGRYIKGFNFTRDDQRFSTTDKWNFLKVKGLINSYLRSIGLKDVRYIPSDLPYLNPYESADIYINDQYVGYIGKIHPEKADRLEIPKETYIAELKLRYVPRDINDSSLKEGYLFTLYKNAEIPVFRELPKYPSVKRDLAFEVAENLQIDKLINVLNRSSELIDKVELFDIYYISSDRKSVALSVEFRAEDRSLSDEEVNKEVELVIQKMKEEIPDLKLRQ
SIO_010081: PERMA_RS00350
subclass of: SO_0000673
so part of: PERMA_RS00350
location: complement(66358..68769)
location: region:66358-68769:-1
so has part: feature:66358-68769:-1:exon

WP_012676075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66358-68769:-1:exon

PERMA_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: pheS
locus tag: PERMA_RS00355
old locus tag: PERMA_0072
so part of: sequence
location: complement(68766..69800)
location: region:68766-69800:-1
so has part: feature:68766-69800:-1:exon
subclass of: SO_0000010

position:68766:-1
position: 68766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69800:-1
position: 69800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68766-69800:-1:exon

PERMA_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: pheS
locus tag: PERMA_RS00355
old locus tag: PERMA_0072
EC number: 6.1.1.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015898874.1
GO component: GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO function: GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phenylalanine--tRNA ligase subunit alpha
translation: MGLKEDLKALEEEAKKLIEEASDIGKLNDIRVNYLGKKGKIKSILKTLGKLSPEERKEIGQLANRIKDELEEALKEKTELLKKKALEEELRKNRIDITLPPQWIESGSSHPVISTLIEISQIFISMGFSVAEGPEVEKEKYNFDMLNIPPDHPARDMQDTFFLNNGDILRTHTSPVQIRTMLKHKPPIAVIAPGRVYRKDADPTHSPMFHQIEGLLVDRDVTFRDLKGILKIFLESVFGKDTKIRFRPSYFPFTEPSAEVDIGCTVCGGKGCRVCKGTGWLEILGCGMVDPEVFKAVGIDPEEYTGFAFGLGIERIAMLKYRITDIRLLFTGDMRFNQQFKGIR
SIO_010081: PERMA_RS00355
subclass of: SO_0000673
so part of: PERMA_RS00355
location: complement(68766..69800)
location: region:68766-69800:-1
so has part: feature:68766-69800:-1:exon

WP_015898874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68766-69800:-1:exon

PERMA_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rplT
locus tag: PERMA_RS00360
old locus tag: PERMA_0073
so part of: sequence
location: complement(69816..70181)
location: region:69816-70181:-1
so has part: feature:69816-70181:-1:exon
subclass of: SO_0000010

position:69816:-1
position: 69816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70181:-1
position: 70181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69816-70181:-1:exon

PERMA_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rplT
locus tag: PERMA_RS00360
old locus tag: PERMA_0073
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675919.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L20
translation: MRVKGPSSKKHKKKILKLAKGYYGAKHRSFRRAKEQVLRSLQYEYRDRRLRKREFRRLWIQRINAAARLNGLSYSQFMHGLKLAGIDLNRKMLADIAVADPETFTKLAEKAKEAISQKSAA
SIO_010081: PERMA_RS00360
subclass of: SO_0000673
so part of: PERMA_RS00360
location: complement(69816..70181)
location: region:69816-70181:-1
so has part: feature:69816-70181:-1:exon

WP_012675919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69816-70181:-1:exon

PERMA_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpmI
locus tag: PERMA_RS00365
old locus tag: PERMA_0074
so part of: sequence
location: complement(70204..70410)
location: region:70204-70410:-1
so has part: feature:70204-70410:-1:exon
subclass of: SO_0000010

position:70204:-1
position: 70204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70410:-1
position: 70410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70204-70410:-1:exon

PERMA_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpmI
locus tag: PERMA_RS00365
old locus tag: PERMA_0074
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676830.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L35
translation: MAKVKMKTNKTAAKRFKVTAKGKIKYWKGGVSHYNTKKSSKRKRQGRKADYVPENIADRVKQLIPYQV
SIO_010081: PERMA_RS00365
subclass of: SO_0000673
so part of: PERMA_RS00365
location: complement(70204..70410)
location: region:70204-70410:-1
so has part: feature:70204-70410:-1:exon

WP_012676830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70204-70410:-1:exon

PERMA_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00370
old locus tag: PERMA_0075
so part of: sequence
location: 70555..71376
location: region:70555-71376:1
so has part: feature:70555-71376:1:exon
subclass of: SO_0000010

position:70555:1
position: 70555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71376:1
position: 71376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70555-71376:1:exon

PERMA_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00370
old locus tag: PERMA_0075
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: cytochrome c
translation: MGRIILIFLIFVVTASAGNIRLKEPPKELGKYYPPNSEGYPFVSLMHTLSLSLTGTVVSVQEKDWKNAEKWALKLKKNYLKIGDKVKKWDKLLKKEAVNNLVLSVKKRDVKGFKQNLQIVGKSCVQCHKNYKISARILYRFPSFHTVSIEDPVSELDIDFHDYMKKMTDDMKKLKIYIFDGKKKRALKSGTRFIKRFEALKQSCSDCHSGKASESLYFGGKVKEGLSMVKNGLRKGEREKIFKGLRLIGVFNCTKCHNTHIIQAELQERFKKR
SIO_010081: PERMA_RS00370
subclass of: SO_0000673
so part of: PERMA_RS00370
location: 70555..71376
location: region:70555-71376:1
so has part: feature:70555-71376:1:exon

WP_012675907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70555-71376:1:exon

PERMA_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00375
old locus tag: PERMA_0077
so part of: sequence
location: 71373..72305
location: region:71373-72305:1
so has part: feature:71373-72305:1:exon
subclass of: SO_0000010

position:71373:1
position: 71373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72305:1
position: 72305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71373-72305:1:exon

PERMA_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00375
old locus tag: PERMA_0077
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multiheme c-type cytochrome
translation: MIWLILAVSIFFTGCDSIKDLFIEEDLLKRPESKRCGECHRVIYSQWKESRHSKSWISEDYKKRTENYRKVKCYSCHIPYQVDPLKEPDHRKKNRHDGVNCVSCHFKDETGSIHGGYDVFSPPHPSKKDTNYKRSEICGGCHKRTYQQWKSSKTEKSCQSCHMPSKKGYLIQKFPFQYLHLKKDIHNHSFPVPIPDKGSFDLKVKLEEDRIAVMLKNLKIPHSVPTADNGRPKYYVTVELFNRGKPVYRERYLITSKDPLNYREEKLIDFYIFEDFTHLKITVERKLSWSKKREKVLEKTFRKGDILASP
SIO_010081: PERMA_RS00375
subclass of: SO_0000673
so part of: PERMA_RS00375
location: 71373..72305
location: region:71373-72305:1
so has part: feature:71373-72305:1:exon

WP_012676122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71373-72305:1:exon

PERMA_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rdgB
locus tag: PERMA_RS00380
old locus tag: PERMA_0076
so part of: sequence
location: complement(72274..72897)
location: region:72274-72897:-1
so has part: feature:72274-72897:-1:exon
subclass of: SO_0000010

position:72274:-1
position: 72274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72897:-1
position: 72897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72274-72897:-1:exon

PERMA_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rdgB
locus tag: PERMA_RS00380
old locus tag: PERMA_0076
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288955.1
GO function: GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
translation: MRIDKILVATTNKGKLKEFKKLFGDLGIQILSLDDMPEKIKVEEDRETFLENAVKKAKEYGDFYKIPVIAEDAGLEVEALKNYPGVYSARFYSIDFGGVYQIKESIDRTNIEKLLDLLKDEKNRKARFVSVVVFYIPEDFGLWTEGYCYGKIAEKPEGEKGFGYDPVFIPEGYKKTMAELDLEEKNRISHRGKAVRKLMEKLRYLLS
SIO_010081: PERMA_RS00380
subclass of: SO_0000673
so part of: PERMA_RS00380
location: complement(72274..72897)
location: region:72274-72897:-1
so has part: feature:72274-72897:-1:exon

WP_015898905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72274-72897:-1:exon

PERMA_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ruvC
locus tag: PERMA_RS00385
old locus tag: PERMA_0078
so part of: sequence
location: complement(72907..73374)
location: region:72907-73374:-1
so has part: feature:72907-73374:-1:exon
subclass of: SO_0000010

position:72907:-1
position: 72907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73374:-1
position: 73374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72907-73374:-1:exon

PERMA_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ruvC
locus tag: PERMA_RS00385
old locus tag: PERMA_0078
EC number: 3.1.21.10
inference: COORDINATES: protein motif:HMM:TIGR00228.1
GO function: GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: crossover junction endodeoxyribonuclease RuvC
translation: MGKTVLGIDPGNYSTGFSIFKITGKKHRLVSSGTIKTSRKKPENFRIIYESLERTINEFSPDEIALESSFYGNNPQTIIKLGEIRGVILLLSAFYRIPVYEYTPQQVKNAITGYGWAKKEDVYLMVQKLFNIKPETNDEADAIAVGFCHCLSKNL
SIO_010081: PERMA_RS00385
subclass of: SO_0000673
so part of: PERMA_RS00385
location: complement(72907..73374)
location: region:72907-73374:-1
so has part: feature:72907-73374:-1:exon

WP_012676301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72907-73374:-1:exon

PERMA_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00390
old locus tag: PERMA_0079
so part of: sequence
location: complement(73374..74126)
location: region:73374-74126:-1
so has part: feature:73374-74126:-1:exon
subclass of: SO_0000010

position:74126:-1
position: 74126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73374-74126:-1:exon

PERMA_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00390
old locus tag: PERMA_0079
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675434.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YebC/PmpR family DNA-binding transcriptional regulator
translation: MAGHSKWHNIRHKKAKMDAKRGQMFTKIIREITVAARQGGGDPEFNPRLRIAIEKAKKANMPVENIERAIKRGTGELEGVSYEEVVYEGYGPEGVAIIVECLTDNRNRTTGEVRHIFTKHGGNLGSSGCVSFLFEEKGVILVPKDKYDEETVFEKAIEAGAEDVITDDEEFYEIRTEPKELYTVKENLEKEGIEIEKAELTRIPTTTVEINDEETATKLMKLLDALEDNDDVQKVYSNFEMSQQLMEKVS
SIO_010081: PERMA_RS00390
subclass of: SO_0000673
so part of: PERMA_RS00390
location: complement(73374..74126)
location: region:73374-74126:-1
so has part: feature:73374-74126:-1:exon

WP_012675434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73374-74126:-1:exon

PERMA_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00395
old locus tag: PERMA_0080
so part of: sequence
location: 74204..74845
location: region:74204-74845:1
so has part: feature:74204-74845:1:exon
subclass of: SO_0000010

position:74204:1
position: 74204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74845:1
position: 74845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74204-74845:1:exon

PERMA_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00395
old locus tag: PERMA_0080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008289143.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease III domain-containing protein
translation: MEESKILEIYRTLLDFFGYQNWWPVYSDNPFVEISFGAILTQNTSWKNVEKALKNLIDEDLVDLEKVSCIHEEKLQEIIKPAGFYKRKSRTLIEFSRRFKDIEKDKITRDLLLSVKGIGKETADSILLYALNRPYFVVDAYTRRVFSRIGFFDKNLSYDEIQELFEKNLPEDTDIYKEYHALIVELGKSFCRKKPLCKDCPLFANCKFRIYNV
SIO_010081: PERMA_RS00395
subclass of: SO_0000673
so part of: PERMA_RS00395
location: 74204..74845
location: region:74204-74845:1
so has part: feature:74204-74845:1:exon

WP_012676044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74204-74845:1:exon

PERMA_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00400
old locus tag: PERMA_0081
so part of: sequence
location: 74866..75465
location: region:74866-75465:1
so has part: feature:74866-75465:1:exon
subclass of: SO_0000010

position:74866:1
position: 74866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75465:1
position: 75465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74866-75465:1:exon

PERMA_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00400
old locus tag: PERMA_0081
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459824.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysophospholipid acyltransferase family protein
translation: MDSYSKKGYRLFFRIRPLFKSLLRIHVEGIDNIPEKGGCIIASNHRSHLDPFVLNTVSPRPILFMAKRELFGIPLLGWIIKKAGAIPVNRNKRDINALKKSIELLKSGECVGIFPEGTRAKPKSFRKPQSGVGLLVSRTDVPVIPVRIEGTDDIFPVGSKFPKLFRSRIYVKIGKPLYFEEKEDYKSISEKIMESIKSL
SIO_010081: PERMA_RS00400
subclass of: SO_0000673
so part of: PERMA_RS00400
location: 74866..75465
location: region:74866-75465:1
so has part: feature:74866-75465:1:exon

WP_012675220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74866-75465:1:exon

PERMA_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ispH
locus tag: PERMA_RS00405
old locus tag: PERMA_0082
so part of: sequence
location: 75475..76329
location: region:75475-76329:1
so has part: feature:75475-76329:1:exon
subclass of: SO_0000010

position:75475:1
position: 75475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76329:1
position: 76329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75475-76329:1:exon

PERMA_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ispH
locus tag: PERMA_RS00405
old locus tag: PERMA_0082
EC number: 1.17.7.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673687.1
GO function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO process: GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
translation: MANIKVAESAGFCFGVKIAVDSAVEAGKKFGKAFTNGPIIHNKQVVQFLEGLNVKELKSYDQLKRGDTILIRSHGVPPKTERMLNQLGVNVIDATCPFVKKVHEKVKQLVEEGYYVVIIGEEGHPEVIGILGHLEEAGGKGIVVENMEDLIRKFPRRNKVGVVAQTTQNEEFFEEAVGYIASNVEELKVFNTICDATSVRQEEVKRLAKEVDVMIIIGGKHSGNTRRLAQISKALNPNTYHVEKADELDSEWFKNAENIGVSAGASTPDWIIKEVVERIREITG
SIO_010081: PERMA_RS00405
subclass of: SO_0000673
so part of: PERMA_RS00405
location: 75475..76329
location: region:75475-76329:1
so has part: feature:75475-76329:1:exon

WP_012676334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75475-76329:1:exon

PERMA_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00410
old locus tag: PERMA_0083
so part of: sequence
location: 76343..77416
location: region:76343-77416:1
so has part: feature:76343-77416:1:exon
subclass of: SO_0000010

position:76343:1
position: 76343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77416:1
position: 77416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76343-77416:1:exon

PERMA_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00410
old locus tag: PERMA_0083
inference: COORDINATES: protein motif:HMM:NF018894.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilZ domain-containing protein
translation: MDERVNILVEAWRQAVEQGANYKALLIIFTVFIAVVIFFMFYMKLKEIVSLKYMKKAFFEEASLYDLTPEEAEILWKYARKLKRDPFLTLEIKATFEKVIQQYTNENPDFDDNMIRNMRKKLGFDTLPEYVPLVTTKDIDIFQTGKMFTETGKSYSVALYDKDERFMYWLLIDTHQPFDFKKGDKVKVKFLRRNDGIYTIETVIEDIIREDDKYIVKLPHVFKMERVQRRKEFRVHVQFPVSLTFKFDEEEVKIEAEAVDISSEGIRVCIPEDIHQKYRLNIGKEIYVEFKLNNRTFSFESSIRNIYREEKKVCYGLHFMKMEERDKESIVSFIIRAEQELLKQYKKLLGRSKTKRV
SIO_010081: PERMA_RS00410
subclass of: SO_0000673
so part of: PERMA_RS00410
location: 76343..77416
location: region:76343-77416:1
so has part: feature:76343-77416:1:exon

WP_012676865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76343-77416:1:exon

PERMA_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00415
old locus tag: PERMA_0084
so part of: sequence
location: 77423..78184
location: region:77423-78184:1
so has part: feature:77423-78184:1:exon
subclass of: SO_0000010

position:77423:1
position: 77423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78184:1
position: 78184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77423-78184:1:exon

PERMA_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00415
old locus tag: PERMA_0084
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880623.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: motility protein A
translation: MDISTIIGIVAAFLLIVISIAIGGSPLAFVNIPSILITVGGGLSATLTSFPMKDLFSGLKAITKAMNPGLPDPMELTDFLVDVANRARKDGILALESNIDEFYGRDPFFGEIMRMLIDGQDIEEIRSNADSSLMKIEQELSTEVAVWETLGELFPAFGMIGTLIGLIQMLQNLNDPSALGPGMAVAMITTLYGAILANAFCVPVSKKLKLYKDLSLLYKESYMFTVEAINNGTNPNVLRSKLMSLFGIKGGEE
SIO_010081: PERMA_RS00415
subclass of: SO_0000673
so part of: PERMA_RS00415
location: 77423..78184
location: region:77423-78184:1
so has part: feature:77423-78184:1:exon

WP_012676556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77423-78184:1:exon

PERMA_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00420
old locus tag: PERMA_0085
so part of: sequence
location: 78188..78883
location: region:78188-78883:1
so has part: feature:78188-78883:1:exon
subclass of: SO_0000010

position:78188:1
position: 78188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78883:1
position: 78883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78188-78883:1:exon

PERMA_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00420
old locus tag: PERMA_0085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008285855.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor protein MotB
translation: MPRKKKQECKGIPGWLVSFGDLMSLLLTFFILLFSMGTISLEKFHMVIKGITESLGGRKIIHEEKILNTSNIEVEFPEMYMKLKKKRNKLQKDLNRLEQLLEKAGIEAEVEKHGSIIRFRLNTERMFPSGSATPYKEVVPLLLEVCKRLKETQFPITIEGHTDNTPIRFKSNLELSAERALSVLKLFKSCGYPDRLLSARGYGEYRPLVPNDTPENRAKNRRIEIVIDTSG
SIO_010081: PERMA_RS00420
subclass of: SO_0000673
so part of: PERMA_RS00420
location: 78188..78883
location: region:78188-78883:1
so has part: feature:78188-78883:1:exon

WP_012675898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78188-78883:1:exon

PERMA_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00425
old locus tag: PERMA_0086
so part of: sequence
location: 78895..79602
location: region:78895-79602:1
so has part: feature:78895-79602:1:exon
subclass of: SO_0000010

position:78895:1
position: 78895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79602:1
position: 79602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78895-79602:1:exon

PERMA_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00425
old locus tag: PERMA_0086
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288694.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar motor protein MotB
translation: MARKKKEECPSVPAWIISFSDLMSLLLTFFILLYSMSVLDIKKLMKFLWYFQGEEAFVATKTVTVIPPISLLQKDIALEIKNRIKRILPMHAYQIEAIENYIVVRLFNDVIFKPDSAELTEKSKKALRGVANALKALDKAYSEVLINGHAYVVTKGIDPWKLSIKRAVVVAQYLIEHGVNPEKIAVTGYGNTKPVYTWNHPLLKRRNDRVEIFIKLKDFREDLMKDEKVKGGKKD
SIO_010081: PERMA_RS00425
subclass of: SO_0000673
so part of: PERMA_RS00425
location: 78895..79602
location: region:78895-79602:1
so has part: feature:78895-79602:1:exon

WP_012676764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78895-79602:1:exon

PERMA_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00430
old locus tag: PERMA_0087
so part of: sequence
location: 79620..80804
location: region:79620-80804:1
so has part: feature:79620-80804:1:exon
subclass of: SO_0000010

position:79620:1
position: 79620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80804:1
position: 80804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79620-80804:1:exon

PERMA_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00430
old locus tag: PERMA_0087
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674753.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent rRNA methyltransferase
translation: MVKKVILNSSGVDKISSLNPWIYRKEIKKFPKDVEKGDIVYLYSSKGNLLGTGYINPESKISVRVLSFFKKKDIDFDFIKERILKAYRKRYRLLEKTDAVRVVHSEADGLPGLIVDLYDRYLSVQINTAGMERFRENIIKALIDIFEPEGIVEKSDEKSREKEGLKTENKVVYGKVPESIVIHENGVKFYIQLEKGQKTGFYLDQRINRFIVSEYIKEGDSVLDLFSNAGGFGIYAGIKGAKDITFVDISKNAVSLIDKNCELNGIKGYTVYRENVFKFLTDSGSMDKRYDLIILDPPSFAKNRYEVKDAIRGFKFLISRSLEILNDGGFLAVFSCSYHVSLDDLKKTVLDVSKNMRCGAEIVKHLYQDEDHPYILNIPFSLYLKGLLIRKNED
SIO_010081: PERMA_RS00430
subclass of: SO_0000673
so part of: PERMA_RS00430
location: 79620..80804
location: region:79620-80804:1
so has part: feature:79620-80804:1:exon

WP_012675957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79620-80804:1:exon

PERMA_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: prmC
locus tag: PERMA_RS00435
old locus tag: PERMA_0088
so part of: sequence
location: 80794..81636
location: region:80794-81636:1
so has part: feature:80794-81636:1:exon
subclass of: SO_0000010

position:80794:1
position: 80794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81636:1
position: 81636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80794-81636:1:exon

PERMA_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: prmC
locus tag: PERMA_RS00435
old locus tag: PERMA_0088
EC number: 2.1.1.297
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674634.1
GO function: GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor N(5)-glutamine methyltransferase
translation: MKIKDLIRIGSERLKEAGIKTPVTDTQILLSYVLKLPRWKLITEREEEIPKEKVMEFFSLIERRAQREPLAYITGEKAFYGLDFKIKKGVLIPRPETEILVDEVLKRIPEDKRVLGLEIGVGSGVISISLLKYRHNLFMYGVDISEKALELTRENAKIHRVSSRLKLLKSDLFKDVPHIKFDFIVSNPPYVSAEEYAGLEEEVKKEPVEALIGGKGGIEFYERIVKEGKIYLKEKGFFGFEIGYTQSDRVKKILQDEGFNVKVYKDLQDYDRVVIGERNG
SIO_010081: PERMA_RS00435
subclass of: SO_0000673
so part of: PERMA_RS00435
location: 80794..81636
location: region:80794-81636:1
so has part: feature:80794-81636:1:exon

WP_012676577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80794-81636:1:exon

PERMA_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: murA
locus tag: PERMA_RS00440
old locus tag: PERMA_0090
so part of: sequence
location: 81629..82915
location: region:81629-82915:1
so has part: feature:81629-82915:1:exon
subclass of: SO_0000010

position:81629:1
position: 81629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82915:1
position: 82915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81629-82915:1:exon

PERMA_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: murA
locus tag: PERMA_RS00440
old locus tag: PERMA_0090
EC number: 2.5.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545732.1
GO function: GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
translation: MVEIRSNTADYLEILGGESLKGTVEISGAKNSALPDMAATILTDETVVLENVPDLLDVFTMRSLLNHIGMEVDELRKGVFQFRLRDINSLEAPYELVSKMRASILVLGAVLTRFRYAKVALPGGCSIGTRPVDLHLEALKKMGARIKVEHGYIYAEAPGGLEGAEINFPKITVTGTENIMMAAVLAKGRTVINNAAREPEVVDLADMLKKMGADIEGEGTERIVINGVEKLSGTVHRIIPDRIEAGTFAILSALFDGNITIKNYPVEYLEYVHRVFERIGIKIIQIGENHIAVKREGRLKPVFVETKEYPYFPTDLQAQLMTLLTVVDGNSKITENIFENRFMHVPELQRLGAKIKIDGRTAYIKGVRRLTGAEVRATDLRASAAMVIAGLIAEGKTVIYDIYHLDRGYENIDQKLRMLGARITRESL
SIO_010081: PERMA_RS00440
subclass of: SO_0000673
so part of: PERMA_RS00440
location: 81629..82915
location: region:81629-82915:1
so has part: feature:81629-82915:1:exon

WP_012675312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81629-82915:1:exon

PERMA_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00445
old locus tag: PERMA_0089
so part of: sequence
location: complement(82896..83741)
location: region:82896-83741:-1
so has part: feature:82896-83741:-1:exon
subclass of: SO_0000010

position:82896:-1
position: 82896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83741:-1
position: 83741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82896-83741:-1:exon

PERMA_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00445
old locus tag: PERMA_0089
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459878.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD/SigA
translation: MADTEKEQTTLNLYIQKMAEHPLLTPEEEKELAKRAKKGDKEALKKLVEGNLRFVVNVAKNFMGWGVPLTDLIAAGNLGLIEAAKRFDPERDVKFISYAVWWIRQAIMQTIFQQTGAVRIPVKESLFISKVKETYEKLKEELKREPTIEEIAEKVGASPKKVKNALQVVRMPYSLDKPLGEEGEDLTLLDVLSKKGTEDVEKEIVEESLHKELNTLLNVLDERERAIIEHRFGLNGEEPKTLTEVGEILGISRERVRQLEQRALKKLRALAMKRHLKDFLS
SIO_010081: PERMA_RS00445
subclass of: SO_0000673
so part of: PERMA_RS00445
location: complement(82896..83741)
location: region:82896-83741:-1
so has part: feature:82896-83741:-1:exon

WP_012676632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82896-83741:-1:exon

PERMA_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: aspS
locus tag: PERMA_RS00450
old locus tag: PERMA_0091
so part of: sequence
location: complement(83885..85702)
location: region:83885-85702:-1
so has part: feature:83885-85702:-1:exon
subclass of: SO_0000010

position:83885:-1
position: 83885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85702:-1
position: 85702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83885-85702:-1:exon

PERMA_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: aspS
locus tag: PERMA_RS00450
old locus tag: PERMA_0091
EC number: 6.1.1.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675723.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate--tRNA ligase
translation: MIDKLGDFKRDYFCGELTENNIGDEVRLLGWADSVRDHGGVIFINLRDKEGIIQVVIDPSKSPKEAYEKAKKVRSEYVLAVRGRVQRRPAGTENPKLPTGTIEIAVDELRILNTCDILPFPIEDGISAHEEVRLRYRFLDIRRPEMMKKLILRHEVYQATREYLAGHGFLEVETPMLTKSTPEGARDFLVPARLEKGKFYALPQSPQLFKQILMVSGIDRYFQIVKCFRDEDLRKDRQPEFTQIDFEMSFVDEEDVITVSEGLIHYIFKKVLGIELKLPFKRMSYTEAIERYGTDKPDLRYSLELKDITDIAKDVQFKVFKDTVEKGGIVKGINVKGGSKFSRKEIDDLTEEAKKYGAKGMAWIKINEDGSLQSPIVKFFTEEQINKIKEIMEGENGDLLIFIADSYEITHRVLGFLRKHLAEKLKLIPENVWEFVWVVDFPLVEWDEEEGRLVALHHPFTSPKEEDIDRLDEAIQDKKVALSFRSRAYDLVLNGEEIGGGSIRIHSSHIQKKVFELLGISDEEAEEKFGFLINALKYGAPPHGGLAFGLDRIVALMTGSESIRDVIAFPKTQKGICPLTDAPDFVQEDQLEELGIEVNIPEETV
SIO_010081: PERMA_RS00450
subclass of: SO_0000673
so part of: PERMA_RS00450
location: complement(83885..85702)
location: region:83885-85702:-1
so has part: feature:83885-85702:-1:exon

WP_012675723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83885-85702:-1:exon

PERMA_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00455
old locus tag: PERMA_0093
so part of: sequence
location: 85787..86350
location: region:85787-86350:1
so has part: feature:85787-86350:1:exon
subclass of: SO_0000010

position:85787:1
position: 85787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86350:1
position: 86350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85787-86350:1:exon

PERMA_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00455
old locus tag: PERMA_0093
inference: COORDINATES: protein motif:HMM:NF021501.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MLTRLFILIFIPLVFQGCIPSEENRVPTAEYQKGLGKKIRNEKAAKIYRATGYKYYKHGNYEKALEFYSKALLKYKELSKLYHPEAAELYLKMGDLYLKMGNNKEALRFYFKALKIFKKYYGTNHFLTAMAYRGLGSVYEKISDYRKAYYFYKKSLPAYEQEFGENHRKTRMIKEKLKVLSQKIKNG
SIO_010081: PERMA_RS00455
subclass of: SO_0000673
so part of: PERMA_RS00455
location: 85787..86350
location: region:85787-86350:1
so has part: feature:85787-86350:1:exon

WP_012675515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85787-86350:1:exon

PERMA_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00460
old locus tag: PERMA_0092
so part of: sequence
location: complement(86347..86571)
location: region:86347-86571:-1
so has part: feature:86347-86571:-1:exon
subclass of: SO_0000010

position:86347:-1
position: 86347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86571:-1
position: 86571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86347-86571:-1:exon

PERMA_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00460
old locus tag: PERMA_0092
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKLERYVQEEVDKKDDRFKKELDRCLKEAERLGNRPDIEIQIRKAGCKDVFDQYEMLIERATERYSREIGNTN
SIO_010081: PERMA_RS00460
subclass of: SO_0000673
so part of: PERMA_RS00460
location: complement(86347..86571)
location: region:86347-86571:-1
so has part: feature:86347-86571:-1:exon

WP_015898920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86347-86571:-1:exon

PERMA_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00465
old locus tag: PERMA_0094
so part of: sequence
location: complement(86624..87394)
location: region:86624-87394:-1
so has part: feature:86624-87394:-1:exon
subclass of: SO_0000010

position:86624:-1
position: 86624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87394:-1
position: 87394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86624-87394:-1:exon

PERMA_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00465
old locus tag: PERMA_0094
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460019.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD-IA family hydrolase
translation: MIIIFDVDGVLIDVSKSYHYSIKDTVDYFSGKDIPKEELLDIKFSFNINNDWDASVAGILYAKSGMSLEQFKDVFKDYSRNLEEMYRFGDESGIDLPEYKNLVEFFEDVYRIHRKKETLIFPHDVLDRMSKKADILGVITGRPESDLDYSFKQFDLYQYFDYIITEDDIPKPELRKPSSYPMKLFFEKVDFDNPVFYIGDTNADLQMVESFNKEEGKNVRFILFEHPHNRHIKSEYRIKKPDEICEVLNSYDYAQD
SIO_010081: PERMA_RS00465
subclass of: SO_0000673
so part of: PERMA_RS00465
location: complement(86624..87394)
location: region:86624-87394:-1
so has part: feature:86624-87394:-1:exon

WP_012676769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86624-87394:-1:exon

PERMA_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: argH
locus tag: PERMA_RS00470
old locus tag: PERMA_0095
so part of: sequence
location: complement(87454..88827)
location: region:87454-88827:-1
so has part: feature:87454-88827:-1:exon
subclass of: SO_0000010

position:87454:-1
position: 87454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88827:-1
position: 88827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87454-88827:-1:exon

PERMA_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: argH
locus tag: PERMA_RS00470
old locus tag: PERMA_0095
EC number: 4.3.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458860.1
GO function: GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
GO process: GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: argininosuccinate lyase
translation: MEKKLWGGRFSEGTDQFVEEFTESVSFDKELALYDIKGSIAHARMLGKQGIIPQEDAEKIIKGLEEIKKEIEEGRFEWKKELEDVHMNIEKALIQKIGDVGGKLHTGRSRNDQVITAFRLYLKEETQNIIELLKELKKALLKKAKETVDIVMPAYTHLQRAQPIRLAHYFLAYLEIYNRDEERFRDTLKRIDQMPLGSGALAGVDFPIDREMTAKELGFSEVMRNSMDATASRDVIIEFLSDAAICISNLSRQSEDLIIWNSTEFSFVELPDKLTTGSSIMPQKKNPDVLELIRGKTGRVYGDLVALLTIVKGLPMAYNRDLQEDKEPVFDAVRTLKGSIIGMTKIIEGMKPKKENMEKAAGGFALATDLANYLVRKGMPFRKAHHVVGQIVAYLTKENRELESITLDELKRFSDLFEEDALNILNPYSVADARKSYGGTAKERVLEQIRYWEERLS
SIO_010081: PERMA_RS00470
subclass of: SO_0000673
so part of: PERMA_RS00470
location: complement(87454..88827)
location: region:87454-88827:-1
so has part: feature:87454-88827:-1:exon

WP_012675497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87454-88827:-1:exon

PERMA_RS10425
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10425
old locus tag: PERMA_0097
so part of: sequence
location: 88908..90437
location: region:88908-90437:1
so has part: feature:88908-90437:1:exon
subclass of: SO_0000010

position:88908:1
position: 88908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90437:1
position: 90437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88908-90437:1:exon

PERMA_RS10425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10425
old locus tag: PERMA_0097
EC number: 2.7.7.65
inference: COORDINATES: protein motif:HMM:TIGR00254.1
GO function: GO:0009975 - cyclase activity [Evidence IEA]
GO process: GO:0009966 - regulation of signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diguanylate cyclase
translation: MKLFKDAAIYIIIFILISSVLYVFLSNKREENERVYLHQKIEKASAEFKATLNGYDMVIYFVYKRYMYDPEIVNALSKAYRDRKNLDKLRKRVYTLLRPLYSDLKRYQIKFFKFYFPDGTTFIRFHRPDKFGDKPEKERFSIFDLGKGGNDRDTIGFKYTFPVTDGNIFIGNVEFTLPFSAVRVEMRKIFRGEYNFLIIKDLIYSKKFSEEKQNYIQSEIDPDFYYEEDPEFKVIRWNIPEEIISEINLQIRNKLKGNLEDFKPKSIAVDINGDYYIASFIPISNKKEKYIGYLVYYEKDNTYGVFKNTFIISYVGINLLVGLLLTMSFILGVIKERFKAMAEIDTLTGIYNKGKFNHLLQVELDRSKRYGRPLSLIIFDIDHFKKINDAFGHQAGDYVLKTLAKIVSSNIRSTDFFARWGGEEFVILAPETDLEGAQILAEKIRKAIEEYPFETVGKVTSSFGVTEAFENDTVDSFVKRADVALYKAKDKGRNRVEIELPANIYSDKV
SIO_010081: PERMA_RS10425
subclass of: SO_0000673
so part of: PERMA_RS10425
location: 88908..90437
location: region:88908-90437:1
so has part: feature:88908-90437:1:exon

WP_012675251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88908-90437:1:exon

PERMA_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00480
old locus tag: PERMA_0096
so part of: sequence
location: complement(90405..91601)
location: region:90405-91601:-1
so has part: feature:90405-91601:-1:exon
subclass of: SO_0000010

position:90405:-1
position: 90405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91601:-1
position: 91601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90405-91601:-1:exon

PERMA_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00480
old locus tag: PERMA_0096
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674060.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CinA family nicotinamide mononucleotide deamidase-related protein
translation: MKVFILITGSEFVNGLKLEKNSLFIAREAFERGLEVNGIGIVGDDMYQIQYFIKMALDKSDILIVSGGLGGTQDDLTREAIQEAIGVHLIYDREWLESIKKTLKDQGRALTDEIKKMARLPYGSKRIENPVGKAVGFVKILDDVNKAVVAVPGVPSEMKPMVKKAFEMLGFKEKLKRSHIFRTFGIQELEIDEMLKDIDGVILNSSPKGVDIFVTDREAFFLKNKVDVIRERVGDYVYTEEDIEMEEVVGRLLKEKGLTVSTAESSTGGLIVSRLVNIPGSSSYVMAGIVSYSNEAKINILGVSKESIKKFGAVSDQVAREMAEGVRRLTGTDISVSDTGIAGPTGATEDKPLGLHYIGYCDGEKTEVHRIVYKGERNDVRLYVSQYALNLIRINIGR
SIO_010081: PERMA_RS00480
subclass of: SO_0000673
so part of: PERMA_RS00480
location: complement(90405..91601)
location: region:90405-91601:-1
so has part: feature:90405-91601:-1:exon

WP_012676586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90405-91601:-1:exon

PERMA_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00485
old locus tag: PERMA_0098
so part of: sequence
location: complement(91598..92707)
location: region:91598-92707:-1
so has part: feature:91598-92707:-1:exon
subclass of: SO_0000010

position:91598:-1
position: 91598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92707:-1
position: 92707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91598-92707:-1:exon

PERMA_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00485
old locus tag: PERMA_0098
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459963.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-2 protease family protein
translation: MNLNPIPLFKVFGIQINLDFSWFFIFFLVTFTLAEGFFPHFYPGYSFIVYWIVGSISAVLLFVSVLLHELSHSVTALHFGIPVKSINLFIFGGVAMIEEEAPNPKVEFLVAAAGPLCSFTLGILFFTMAYFYPVDDLLNGIINYLMYVNFALGLFNLVPAFPLDGGRILRAIIWTKKDLLTATRISSLSGTIFAYFLMFVGVISILQGNFINGMWYGLIGLFLRQASKTSYEQTKFSVILSGYKVENFMQTVKPLLPDETVLDFINFYYPFYRSSIYPVIGRDGQIYVINIEDIKNIPEERWSVVHVIDIAKPLIAYVSPYDSLYKALKLMNKYRLEEIPVVYGNTILGILRKSSIELLLERYLEEEKR
SIO_010081: PERMA_RS00485
subclass of: SO_0000673
so part of: PERMA_RS00485
location: complement(91598..92707)
location: region:91598-92707:-1
so has part: feature:91598-92707:-1:exon

WP_041530849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91598-92707:-1:exon

PERMA_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00490
old locus tag: PERMA_0099
so part of: sequence
location: complement(92720..93223)
location: region:92720-93223:-1
so has part: feature:92720-93223:-1:exon
subclass of: SO_0000010

position:92720:-1
position: 92720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93223:-1
position: 93223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92720-93223:-1:exon

PERMA_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00490
old locus tag: PERMA_0099
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547788.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-binding protein
translation: MASGRTHEIINLLFLPGAVYYLNPVSFEGFISGYIIGTFFLSPDNDIYHSKPNRRWGFLRFVWYPYTKIFSHRGISHIPVIGTATKIVYLSLVSLILIYIFIFSLKYAFPDLDIQILDRFRDVDIYSFLSGSFVFSFIFGIFLAEMVHIFTDFVYSTLKRFKIIGRS
SIO_010081: PERMA_RS00490
subclass of: SO_0000673
so part of: PERMA_RS00490
location: complement(92720..93223)
location: region:92720-93223:-1
so has part: feature:92720-93223:-1:exon

WP_012676822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92720-93223:-1:exon

PERMA_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00495
old locus tag: PERMA_0100
so part of: sequence
location: complement(93234..94094)
location: region:93234-94094:-1
so has part: feature:93234-94094:-1:exon
subclass of: SO_0000010

position:93234:-1
position: 93234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94094:-1
position: 94094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93234-94094:-1:exon

PERMA_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00495
old locus tag: PERMA_0100
inference: COORDINATES: protein motif:HMM:NF012894.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MKKKTAFISAVIGVSLIFGSCAKKTEEVKKPWEKETEIKLSSIKDKINQLYKLHVVECAPKDIAIAESYIDAVDGLEYIDPNENVEKTVHISKVDQITYLNKARKYVSIARNKVYSDVDKDGIPCYQEIEQGTDPFVPEGEKVAKLEERKTPEKKVEKEREIIEEQFEGYYPLKLHARIHFEFDKYQIKKEYLPYLNVISKYLKSKPNLKVKIVGYTDSIGSKSYNDRLAYKRALAVKEYLIKQGIPAERIEIVGRGKENYLVDNKTWLNRFTNRRADFFVMEVTQ
SIO_010081: PERMA_RS00495
subclass of: SO_0000673
so part of: PERMA_RS00495
location: complement(93234..94094)
location: region:93234-94094:-1
so has part: feature:93234-94094:-1:exon

WP_012676804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93234-94094:-1:exon

PERMA_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00500
old locus tag: PERMA_0101
so part of: sequence
location: complement(94097..94384)
location: region:94097-94384:-1
so has part: feature:94097-94384:-1:exon
subclass of: SO_0000010

position:94097:-1
position: 94097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94384:-1
position: 94384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94097-94384:-1:exon

PERMA_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00500
old locus tag: PERMA_0101
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRFFIALLSVIFFTVASYSGEVTTTELLDEAQNSLKSAFESGCPEVAPYEYYKAEAYYMIAREETSKLNLEAGNAAALKSIEWSLKAMSKRFGGN
SIO_010081: PERMA_RS00500
subclass of: SO_0000673
so part of: PERMA_RS00500
location: complement(94097..94384)
location: region:94097-94384:-1
so has part: feature:94097-94384:-1:exon

WP_012675308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94097-94384:-1:exon

PERMA_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ftsY
locus tag: PERMA_RS00505
old locus tag: PERMA_0103
so part of: sequence
location: 94493..95407
location: region:94493-95407:1
so has part: feature:94493-95407:1:exon
subclass of: SO_0000010

position:94493:1
position: 94493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95407:1
position: 95407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94493-95407:1:exon

PERMA_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ftsY
locus tag: PERMA_RS00505
old locus tag: PERMA_0103
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459107.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal recognition particle-docking protein FtsY
translation: MFKSIVSKLKEGLSKTKKQISDSFNLISFGRKIDESLFEDIEMVLLKADVGLKATEEIIQFLREESKKRKITEGEDLKELLKEKLYEILKKCEGKLELGDQKPAVILFLGINGSGKTTTIGKLASQFVQEGKSVVLAAADTFRAAAIDQLEVWAERSGARIVKHTQGADPSAVVYDAVNSAKSRGDDIVLIDTAGRLHTKEHLMKELQKIKRTIKKLMPDQPVETILVLDGTIGQNSINQAKTFKESTDVTGIVITKLDGTAKGGAIIPICQELCIPVKFIGVGEDIEDLQPFDAKNFVDALFD
SIO_010081: PERMA_RS00505
subclass of: SO_0000673
so part of: PERMA_RS00505
location: 94493..95407
location: region:94493-95407:1
so has part: feature:94493-95407:1:exon

WP_012675543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94493-95407:1:exon

PERMA_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ggt
locus tag: PERMA_RS00510
old locus tag: PERMA_0102
so part of: sequence
location: complement(95404..96921)
location: region:95404-96921:-1
so has part: feature:95404-96921:-1:exon
subclass of: SO_0000010

position:95404:-1
position: 95404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96921:-1
position: 96921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95404-96921:-1:exon

PERMA_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ggt
locus tag: PERMA_RS00510
old locus tag: PERMA_0102
EC number: 2.3.2.2
inference: COORDINATES: protein motif:HMM:TIGR00066.1
GO process: GO:0006750 - glutathione biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gamma-glutamyltransferase
translation: MKGIIAAGDKLTAEAGAEILRAGGNAFDAAVASLLSAPLAEPALTSLGGGGFLLAVEKGMYPLIYDFFVDVPPKRIDNPDFYPVYVDFGSAVQEFHIGCGSVAIPGMVAGIYQIYRERCSMPLEKLIKPAVRYAEEGIYLSKMQASFVKLLEPIFTATEESRRIYTVNGKLIDEKTLYRNPDYADFLRAFSKEGSWIFYEGEIAERIEKLSLENGGLLRREDLRRYKVDEKDPVFFRFRDHDIFTNSPPSAGGLLIAFTLKLLEDTELGSFGSLKHISSIVEAMHTTQLFRREHIDRNIHKKELELIIEDRSLFESYKKFFRKRLNLWGNTTHISIIDRDGNAVSVTTTNGEGSGYIIPGTGIMLNNMLGEEDLNPEGFFRWDPYLRLPSMMSPTVVMKDDKIRLVLGSAGSNRIRSAILNCIINYTVFNKTVQEAVSLPRIHFENHTVFLEPGFKKEVIKNLERYYETVVFEDINLFFGGVQAVTGDFEGAGDPRRGGYVIKVD
SIO_010081: PERMA_RS00510
subclass of: SO_0000673
so part of: PERMA_RS00510
location: complement(95404..96921)
location: region:95404-96921:-1
so has part: feature:95404-96921:-1:exon

WP_012675945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95404-96921:-1:exon

PERMA_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00515
old locus tag: PERMA_0104
so part of: sequence
location: complement(96918..98006)
location: region:96918-98006:-1
so has part: feature:96918-98006:-1:exon
subclass of: SO_0000010

position:96918:-1
position: 96918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98006:-1
position: 98006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96918-98006:-1:exon

PERMA_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00515
old locus tag: PERMA_0104
inference: COORDINATES: protein motif:HMM:TIGR02050.1
GO function: GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbdK family carboxylate-amine ligase
translation: MKLDFRSSKPFTVGIELEIQLVDRGSFELSESSEIVFSNASEGLKKLLHPELLTSMVEIVTPVCETPEEAVSHIKNAVKEIDLIGEDYGFRSAALGTHVFAKKETIHITAKDRYLKLLEEFQILLKQFLIYGLHIHVGFPEKEMAIKAYNETLNNLPLFLAVSTSSPFFLGEFTGLNSFRTKIFEQLPRAGIPEYFDSYSDFEKLYFTLLENGFIQSIKDIWWDVRIHPDFGTVELRVCDSNPDMERIEFIATLFQAVCFYSSFSSGERYFHQILKQNKWNATRYSVEGRFLYREGTVQIKKRIADIIKELKKTDILKELGTEKRMEKLSDIIGKKSISQMMIEEYRKKGSIKELERFGFIE
SIO_010081: PERMA_RS00515
subclass of: SO_0000673
so part of: PERMA_RS00515
location: complement(96918..98006)
location: region:96918-98006:-1
so has part: feature:96918-98006:-1:exon

WP_012676677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96918-98006:-1:exon

PERMA_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00520
old locus tag: PERMA_0105
so part of: sequence
location: complement(97996..99264)
location: region:97996-99264:-1
so has part: feature:97996-99264:-1:exon
subclass of: SO_0000010

position:97996:-1
position: 97996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99264:-1
position: 99264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97996-99264:-1:exon

PERMA_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00520
old locus tag: PERMA_0105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nodulation protein NfeD
translation: MRYIIAFILFLFSLSPAGVVTGQWNAPVTPVMSDYVKRVIHKAEVEKADAVIIMIDTPGGLDTSMREIIKTIMNSSVPVVVYVYPPGSRAASAGAIITVSADIAAMSPSTNIGSASPVQMGGKDIEETMKKKIINDMVAFVKGIAKEKGRNEKIIVKMVTESINLTAEEALKKNVIDIIATDLDDLLNKIEGRTVKKHGKEIKISLKDKKIVKVEKSLKEKILTILTNPTVAYLLLMIGFYGIFFELYNPGSLIPGILGTISLLLALYSLNIIDVNWLGVLLIAAGVLFFILEVITPTFGALALSGVIAILFGSLILTDPDSPYGDISLKIIIPVVAFSALFFLTVAYLGLKAQRRKTETGMEGMIGMIGKAETDIDPEGKVFIAGEIWNAYSEEPIKKGENVKVVSVKGLRLKVERTEGET
SIO_010081: PERMA_RS00520
subclass of: SO_0000673
so part of: PERMA_RS00520
location: complement(97996..99264)
location: region:97996-99264:-1
so has part: feature:97996-99264:-1:exon

WP_012676249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97996-99264:-1:exon

PERMA_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: cooS
locus tag: PERMA_RS00525
old locus tag: PERMA_0106
so part of: sequence
location: 99513..101399
location: region:99513-101399:1
so has part: feature:99513-101399:1:exon
subclass of: SO_0000010

position:99513:1
position: 99513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101399:1
position: 101399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99513-101399:1:exon

PERMA_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: cooS
locus tag: PERMA_RS00525
old locus tag: PERMA_0106
EC number: 1.2.7.4
inference: COORDINATES: protein motif:HMM:TIGR01702.1
GO function: GO:0018492 - carbon-monoxide dehydrogenase (acceptor) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic carbon-monoxide dehydrogenase catalytic subunit
translation: MSCDYCITPHESVKEMHSFLTSMGFKHTFFERVKRQGAICYFGEQGRCCTLCPDGPCRIKRRAPKGKCGIDADGLAARNLLRLVNQGGAAYTHDFKTTLKTLKAIAEGKSPFRVSDRNKLLWFAGSLGLDTEGTDEEIIGRLADFLEREFMKDLNEPLTLIEKLAPESRVEIWKSLGIIPGGYIFESHEASAKVMPNIDTDYIDLALTSLRLGLSAGFLANIATTVIRDIIFGSPDITEGYADIGVLDKDYVNIVVHGHVPWMGSIVAKKAKTAKFQNIARSAGAKGIKVYGSLCTGQELLQRPETAKYLDGQVGNWLTQEFVAATGAVDAFLMDKNCAAPGMANLVQSLKLHTKLIPVSSVVRLKDVEARSDFMYDPVKAEEQAERLIMEAIDAYKNRRKTYKIHIPERKTHYIAGFGIESILKVLGGTPDPLFEAIQDGTIKGVVGLVSCTTMKNGHGTFTYDFVKELLKRDILVLIAGCASSLAQVEGFTNSKGRKEFAGPGLRALCEALDIPPVLNFGSCLDTGRMALLIIALSEYLGVDPSALPVVAAAPEYYNNDALIDGLLAVSLGINTYVNPVPPIVGGPGFTRLLTRDLENLLGARFMVEPDAVKAAQMIEEELIRKVS
SIO_010081: PERMA_RS00525
subclass of: SO_0000673
so part of: PERMA_RS00525
location: 99513..101399
location: region:99513-101399:1
so has part: feature:99513-101399:1:exon

WP_012675684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99513-101399:1:exon

PERMA_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00530
old locus tag: PERMA_0107
so part of: sequence
location: complement(101419..102105)
location: region:101419-102105:-1
so has part: feature:101419-102105:-1:exon
subclass of: SO_0000010

position:101419:-1
position: 101419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102105:-1
position: 102105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101419-102105:-1:exon

PERMA_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00530
old locus tag: PERMA_0107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880129.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YggS family pyridoxal phosphate-dependent enzyme
translation: MSIRENVERIREIIYRSAERSGRDPEEIILLAASKTQPVEKIKEAYEAGVRYFGENRVQEGIKKIEQLKEIRDIHWHLIGGLQTNKAKYAVRYFELIHSLDRESLADELDKRARKIGKKQDVLIEVNIGEEETKYGVKPENLEKLFEYSIKKENIRILGLMCIPPYFEDKERSRPYFVRLREMKEKLERDFGVKLPHLSMGMSHDFDVAVEEGATIVRIGTAIFGERE
SIO_010081: PERMA_RS00530
subclass of: SO_0000673
so part of: PERMA_RS00530
location: complement(101419..102105)
location: region:101419-102105:-1
so has part: feature:101419-102105:-1:exon

WP_015898856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101419-102105:-1:exon

PERMA_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: gcvH
locus tag: PERMA_RS00535
old locus tag: PERMA_0108
so part of: sequence
location: 102165..102578
location: region:102165-102578:1
so has part: feature:102165-102578:1:exon
subclass of: SO_0000010

position:102165:1
position: 102165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102578:1
position: 102578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102165-102578:1:exon

PERMA_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: gcvH
locus tag: PERMA_RS00535
old locus tag: PERMA_0108
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288914.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycine cleavage system protein GcvH
translation: MAAEEYRIEDGFYYTKEHMWVKVEDSDAVIGITDYGQHQLGDIVFVELPSVNQEVESGEKVVSIESVKAAIDLFSPLSGRIISVNEDLKEDPSLLNTDPYGEGWIYEMEISDTTELEDLMTSDDYRAYIQEIEAEEG
SIO_010081: PERMA_RS00535
subclass of: SO_0000673
so part of: PERMA_RS00535
location: 102165..102578
location: region:102165-102578:1
so has part: feature:102165-102578:1:exon

WP_012675418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102165-102578:1:exon

PERMA_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00540
old locus tag: PERMA_0109
so part of: sequence
location: 102580..103110
location: region:102580-103110:1
so has part: feature:102580-103110:1:exon
subclass of: SO_0000010

position:102580:1
position: 102580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103110:1
position: 103110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102580-103110:1:exon

PERMA_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00540
old locus tag: PERMA_0109
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547952.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ACT domain-containing protein
translation: MRHFVLTAVGEDRPGIVAGITKVLYEKGFNIEDSTMTRLNNEFTVMLIVTTEEDITEDELRESFDKVAREKDLYINVKEIPEDIFEKKHKVGEVYNIVVYGADKPGIVYSVAKLLSDRNINISDLRTEKSNDLYLLIAQLEFPPGMSEEELKVDIERLKEELNIDISLEKEEAVEM
SIO_010081: PERMA_RS00540
subclass of: SO_0000673
so part of: PERMA_RS00540
location: 102580..103110
location: region:102580-103110:1
so has part: feature:102580-103110:1:exon

WP_012676172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102580-103110:1:exon

PERMA_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: def
locus tag: PERMA_RS00545
old locus tag: PERMA_0110
so part of: sequence
location: 103110..103619
location: region:103110-103619:1
so has part: feature:103110-103619:1:exon
subclass of: SO_0000010

position:103619:1
position: 103619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103110-103619:1:exon

PERMA_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: def
locus tag: PERMA_RS00545
old locus tag: PERMA_0110
EC number: 3.5.1.88
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459597.1
GO function: GO:0042586 - peptide deformylase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide deformylase
translation: MEKFEILTYPDERLKKVSKPVEDFGRDFKDFVERLLYTMRNSPAGVGIAAPQVNRHIQTIIVDASEYKHKYNKTNHGLMILSNPRIIAYDGEIVIREGCLSVPDFTGNVKRHYWIKVEAEDIDGNTITFDTEGFEAVVIQHEMDHLKGKLFLDRVVSPKDIFKRKVYKK
SIO_010081: PERMA_RS00545
subclass of: SO_0000673
so part of: PERMA_RS00545
location: 103110..103619
location: region:103110-103619:1
so has part: feature:103110-103619:1:exon

WP_012676933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103110-103619:1:exon

PERMA_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00550
old locus tag: PERMA_0111
so part of: sequence
location: 103678..104730
location: region:103678-104730:1
so has part: feature:103678-104730:1:exon
subclass of: SO_0000010

position:103678:1
position: 103678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104730:1
position: 104730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103678-104730:1:exon

PERMA_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00550
old locus tag: PERMA_0111
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MINIKPFNFNYEFLTIAKPQGKSITIKAGETVRAEVIDVLPSGGVVLRMKGGHITVNTEIPLQKDTSLLLKILNTPDTDHRLRFQIIAVLGREGSISLNPKASITLNQLVSLFSSEELKDSFIKSLVDLLPQKFNSLDSNQRNILVSILLNNSRKLILQSVQEMFKENFIPVKSLTPDKLQNAIVNTGIFFENKLRRGSNIEEDLKFKALKNVHSGDENLKELIKTIDQFQIVSRLTDGIFTFLPVLWEGLKRGDIFIKERAKNGKRGYLCIIDLEFSDIGDLQISVFLYEKDLMVTLYVEDEGFREILSSGIKELKDNLAVSFNNIFLKFKNRKEESIGSGDNLFHLKV
SIO_010081: PERMA_RS00550
subclass of: SO_0000673
so part of: PERMA_RS00550
location: 103678..104730
location: region:103678-104730:1
so has part: feature:103678-104730:1:exon

WP_015898858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103678-104730:1:exon

PERMA_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00555
old locus tag: PERMA_0112
so part of: sequence
location: 104727..105005
location: region:104727-105005:1
so has part: feature:104727-105005:1:exon
subclass of: SO_0000010

position:104727:1
position: 104727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105005:1
position: 105005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104727-105005:1:exon

PERMA_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00555
old locus tag: PERMA_0112
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015419560.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscU/YscU/HrcU family type III secretion system export apparatus switch protein
translation: MKEIKKAVALRYDREKNDAPEVVAKGQGLIAERIVEIAREYGIEIKQDRELVQILSQLDIKQEIPPELYKAVAEILIFIYRKKKKIKSGEKK
SIO_010081: PERMA_RS00555
subclass of: SO_0000673
so part of: PERMA_RS00555
location: 104727..105005
location: region:104727-105005:1
so has part: feature:104727-105005:1:exon

WP_012676730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104727-105005:1:exon

PERMA_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: amrB
locus tag: PERMA_RS00560
old locus tag: PERMA_0113
so part of: sequence
location: 105002..105811
location: region:105002-105811:1
so has part: feature:105002-105811:1:exon
subclass of: SO_0000010

position:105002:1
position: 105002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105811:1
position: 105811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105002-105811:1:exon

PERMA_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: amrB
locus tag: PERMA_RS00560
old locus tag: PERMA_0113
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674092.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AmmeMemoRadiSam system protein B
translation: MSISVREPAVSNAFYPGNPEELRDLIRHYLSMAPLYDIKPEAVVSPHAGYIYSGEVAAVGYKQFLNLDRDKHYNILLIGPSHYVPFAGISFGYYDFWETPLGEVRVNKKVIEDFVYRNPDIPVTLNTLPHSKEHSLEVQVPFLQVVLDNFSIIPVIYGHVDYKVLERVIDFIKDDRDDVIVVISSDLSHYYPDDVAKGIDRYCNLAVELLDLSYLEECEACGKTGIEAIISFASKKGWKSKVLDYKTSGDTAGDRASVVGYGSYIFYRG
SIO_010081: PERMA_RS00560
subclass of: SO_0000673
so part of: PERMA_RS00560
location: 105002..105811
location: region:105002-105811:1
so has part: feature:105002-105811:1:exon

WP_012675617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105002-105811:1:exon

PERMA_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: amrA
locus tag: PERMA_RS00565
old locus tag: PERMA_0114
so part of: sequence
location: 105814..106404
location: region:105814-106404:1
so has part: feature:105814-106404:1:exon
subclass of: SO_0000010

position:105814:1
position: 105814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106404:1
position: 106404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105814-106404:1:exon

PERMA_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: amrA
locus tag: PERMA_RS00565
old locus tag: PERMA_0114
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AmmeMemoRadiSam system protein A
translation: MEDLIRSLDQISDEEGEALVYLARKAIEEYLITGITVDLKEIPYESWKKKGASFVTLENRTTGALRGCIGSIIPVRPLYKDVIHNAISAATQDPRFPPVTVNELPEIRVKVSVLSYPEPLEFKDPAELLKKIEPFKDGLILKYENFQGTFLPDVWQQIPDRQLFLTNLCSKAGMPPDCWLKYPIKIYRYRTKTFSE
SIO_010081: PERMA_RS00565
subclass of: SO_0000673
so part of: PERMA_RS00565
location: 105814..106404
location: region:105814-106404:1
so has part: feature:105814-106404:1:exon

WP_012676458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105814-106404:1:exon

PERMA_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00570
old locus tag: PERMA_0115
so part of: sequence
location: complement(106429..106854)
location: region:106429-106854:-1
so has part: feature:106429-106854:-1:exon
subclass of: SO_0000010

position:106429:-1
position: 106429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106854:-1
position: 106854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106429-106854:-1:exon

PERMA_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00570
old locus tag: PERMA_0115
inference: COORDINATES: protein motif:HMM:NF012436.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferritin-like domain-containing protein
translation: MSGITREKFIEELNKDLEWEYAAAIQYIQHASLITGPEYESIIKELIVHANEEIQHAITLSEQIAFLGGIPSISVEEIKTSMDSKEMLIQDLEGEENAIKRYKERIKQAEELGEYGLRRVLEDILVQEEEHKRDLLTVLGR
SIO_010081: PERMA_RS00570
subclass of: SO_0000673
so part of: PERMA_RS00570
location: complement(106429..106854)
location: region:106429-106854:-1
so has part: feature:106429-106854:-1:exon

WP_012676894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106429-106854:-1:exon

PERMA_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00575
old locus tag: PERMA_0116
so part of: sequence
location: complement(106921..107544)
location: region:106921-107544:-1
so has part: feature:106921-107544:-1:exon
subclass of: SO_0000010

position:106921:-1
position: 106921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107544:-1
position: 107544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106921-107544:-1:exon

PERMA_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00575
old locus tag: PERMA_0116
EC number: 4.2.1.1
inference: COORDINATES: protein motif:HMM:NF012696.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbonic anhydrase
translation: MKVPFFEGIKAFKELKFPKYRDKFLELVEKGQSPKALFITCSDSRIHPDEITGADIGDLFIVRNIGNMVPPFKPDDDYHGTAAAIEYAVSVLNVPHIIVCGHSYCGACESLYRDLGESEELIHVRRWLEIDREVREIALKQIPEPGRDLFELTERLNIIKQLENLLTYPAVRRRVEEEDLTLHGWYYRIDKGEIEYYDFEKNEFLPI
SIO_010081: PERMA_RS00575
subclass of: SO_0000673
so part of: PERMA_RS00575
location: complement(106921..107544)
location: region:106921-107544:-1
so has part: feature:106921-107544:-1:exon

WP_012675525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106921-107544:-1:exon

PERMA_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00580
old locus tag: PERMA_0117
so part of: sequence
location: complement(107549..108364)
location: region:107549-108364:-1
so has part: feature:107549-108364:-1:exon
subclass of: SO_0000010

position:107549:-1
position: 107549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108364:-1
position: 108364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107549-108364:-1:exon

PERMA_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00580
old locus tag: PERMA_0117
EC number: 2.3.1.117
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459504.1
GO function: GO:0016740 - transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
translation: MEELKRLITESWENRELLKEKQYIDAVRETIDLLDRGKIRVAEKRDGEWVVNEWVKQAILLYFPIQDMQVMEVGPFEYYDKIPLKKNWKEAGVRVVPPATARYGSFIEKGAILMPSYVNIGAYVGSGTLVDTWATVGSCAQVGKNVHLSGGVGIGGVLEPPSAKPVIIEDNCFIGSRCIIVEGAVIEEEAVLGAGVVITGSTRIIDVSGEEPVEYRGRVPARSVVIPGVMNKKFPAGEYGVPVALIIGKRKESTDKKVSLNEALREFNIEG
SIO_010081: PERMA_RS00580
subclass of: SO_0000673
so part of: PERMA_RS00580
location: complement(107549..108364)
location: region:107549-108364:-1
so has part: feature:107549-108364:-1:exon

WP_012676639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107549-108364:-1:exon

PERMA_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00585
old locus tag: PERMA_0118
so part of: sequence
location: complement(108388..108858)
location: region:108388-108858:-1
so has part: feature:108388-108858:-1:exon
subclass of: SO_0000010

position:108388:-1
position: 108388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108858:-1
position: 108858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108388-108858:-1:exon

PERMA_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00585
old locus tag: PERMA_0118
inference: COORDINATES: protein motif:HMM:NF022400.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2628 domain-containing protein
translation: MENISTEEIKAFVGEKSDYYIKKFEKFEKGGSISWNWSAFFFGVLWMFYRKMYLYGTGIFLGILFLNIILEILKVNPVVSTGVSLWLWIGFGMFGNYIYYIFVINSIKKLKKQFHSEEQFFELLKKKGGVNKLILYIFGALGLIYLLLLVIYMFNQ
SIO_010081: PERMA_RS00585
subclass of: SO_0000673
so part of: PERMA_RS00585
location: complement(108388..108858)
location: region:108388-108858:-1
so has part: feature:108388-108858:-1:exon

WP_012675272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108388-108858:-1:exon

PERMA_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00590
old locus tag: PERMA_0119
so part of: sequence
location: 108935..109606
location: region:108935-109606:1
so has part: feature:108935-109606:1:exon
subclass of: SO_0000010

position:108935:1
position: 108935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109606:1
position: 109606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108935-109606:1:exon

PERMA_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00590
old locus tag: PERMA_0119
inference: COORDINATES: protein motif:HMM:NF016764.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Yip1 family protein
translation: MFKNFLDLYFKPKQGWEELGKEKFTIKDLYLKIVIIFAFIPAISHFIGFTLFKNMYIAAINEFLKMAEQDKEQSQRTIEYMKALKQALLDNDLTKELSIMLITYGFELFKPVVLATIILFLSPAFKGIKDPDKSFTVAVFALVPSWAAGAFYVVNSPITMFMLFLGTFYTFYLVFIGAEKVLKIPSEDSKNFQFIIVAIILYLVISGVIGQIEAGLTYRVLLP
SIO_010081: PERMA_RS00590
subclass of: SO_0000673
so part of: PERMA_RS00590
location: 108935..109606
location: region:108935-109606:1
so has part: feature:108935-109606:1:exon

WP_012675225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108935-109606:1:exon

PERMA_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00595
old locus tag: PERMA_0120
so part of: sequence
location: 109644..110102
location: region:109644-110102:1
so has part: feature:109644-110102:1:exon
subclass of: SO_0000010

position:109644:1
position: 109644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110102:1
position: 110102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109644-110102:1:exon

PERMA_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00595
old locus tag: PERMA_0120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881210.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome
translation: MKKFFSLLVSVGMLLTVSAYSAEEEFQKGYHIYQKICAACHVESVTPEEMAKIRENVKAGKKPPFKAPPMSEVSARVKKFYPDEEAFVNFVKDYITNPSKKKGVCLPMAYKLFGVMPAIGKNMKEEDKEAVAIWLYRRFDETWEEFIKKHPH
SIO_010081: PERMA_RS00595
subclass of: SO_0000673
so part of: PERMA_RS00595
location: 109644..110102
location: region:109644-110102:1
so has part: feature:109644-110102:1:exon

WP_012675535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109644-110102:1:exon

PERMA_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00600
old locus tag: PERMA_0121
so part of: sequence
location: 110234..111454
location: region:110234-111454:1
so has part: feature:110234-111454:1:exon
subclass of: SO_0000010

position:110234:1
position: 110234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111454:1
position: 111454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110234-111454:1:exon

PERMA_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00600
old locus tag: PERMA_0121
inference: COORDINATES: protein motif:HMM:TIGR00836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ammonium transporter
translation: MSIVPADNVWILTATALVFLMSIPGLALFYSGLSKGKSMLNTIMMVMVAFCVVSILWIVYGYSLTFGNDIGGFIGSLQYIFLSGINPADPAPASDNLYHYLFIFFQMTFAAITVALMAGAFIERMKFTAWILISVLWATVVYFPVAHWIWGGGWLSQLGTLDFAGGIVVHETCGIGALVGAILLGVRKENVMKPANLPLVAVGTGLLWFGWFGFNGGSALGMNSVAISAAFVTTIAALTGGLTWMFAEWILFKKPTSLGLFTGFIAGLATITPAAGFVDVFASVIIGFLGGIVCFVAVVYVKNKFKYDDSLDVFGVHGVGGMLGTILLAILAKPAVGEVAGLLYGSGSQLIPQIVGVIAVGIYTAVATFIIFKIADMVTGLRISKDEEQQGIDEIIHGEKAYNEIL
SIO_010081: PERMA_RS00600
subclass of: SO_0000673
so part of: PERMA_RS00600
location: 110234..111454
location: region:110234-111454:1
so has part: feature:110234-111454:1:exon

WP_012675783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110234-111454:1:exon

PERMA_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00605
old locus tag: PERMA_0122
so part of: sequence
location: 111466..112239
location: region:111466-112239:1
so has part: feature:111466-112239:1:exon
subclass of: SO_0000010

position:111466:1
position: 111466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112239:1
position: 112239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111466-112239:1:exon

PERMA_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00605
old locus tag: PERMA_0122
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012962655.1
GO function: GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR00282 family metallophosphoesterase
translation: MKFLIIGDVIGRTGRNALREFLPSLIDKEEPDFIIANGENAAGGFGITKKVLDELLSMGIDVITSGNHIWDKKEIVQFIDQEERLLRPANYPPSALGRGYGIYKKNDKRIAVINLMGRVFMGIPLDCPFRTFDEIYEKIKDTVDYIVVDFHAEATSEKMAFGYYVDGKADIVFGTHSHVPTADEQILPKGTAYITDVGLTGAVHSVIGMKIDQPIQKFLTGMPVKYEVATGGYLFHAIVVEKTDEKTEIRRIKMKKE
SIO_010081: PERMA_RS00605
subclass of: SO_0000673
so part of: PERMA_RS00605
location: 111466..112239
location: region:111466-112239:1
so has part: feature:111466-112239:1:exon

WP_015898965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111466-112239:1:exon

PERMA_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00610
old locus tag: PERMA_0124
so part of: sequence
location: 112244..113422
location: region:112244-113422:1
so has part: feature:112244-113422:1:exon
subclass of: SO_0000010

position:112244:1
position: 112244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113422:1
position: 113422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112244-113422:1:exon

PERMA_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00610
old locus tag: PERMA_0124
inference: COORDINATES: protein motif:HMM:NF020252.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HDOD domain-containing protein
translation: MPISGEVYLSKIPLLDKNKRIFAYELTLKDKEENPIPVEDFAEILANISLERIAGHHLLFIKVDPHILDQEILDYIPEEKTVLYITKINEDIIPVIKQLKSIGFRFAFPLNKDFETTKNLADYVFFNVSKLKDELIKKLVTIKFPFEFVLEGIKDEKEFEYYISLGYKLFRGDFILRPQTIVGKTIEPSKAAIIQLFNQINEEFDPKKIEEIIKKNPDLSVSLLKYINSAVFSFREKITSIRHAISILGQKNLMQWLLLYMYRTSDDTSYAETLLELAAERGKTMEIIFEKLKLPKEEVEKAFLVGVLSLMDKLLKTPKEEFVKELNLDEEINEALVRYEGKLGKVLLIVEKIEEGNLQEISHILEDMKLSINDIMAAQVQAYAWFEDVNIV
SIO_010081: PERMA_RS00610
subclass of: SO_0000673
so part of: PERMA_RS00610
location: 112244..113422
location: region:112244-113422:1
so has part: feature:112244-113422:1:exon

WP_012676433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112244-113422:1:exon

PERMA_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: pdxA
locus tag: PERMA_RS00615
old locus tag: PERMA_0123
so part of: sequence
location: complement(113409..114368)
location: region:113409-114368:-1
so has part: feature:113409-114368:-1:exon
subclass of: SO_0000010

position:113409:-1
position: 113409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114368:-1
position: 114368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113409-114368:-1:exon

PERMA_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: pdxA
locus tag: PERMA_RS00615
old locus tag: PERMA_0123
EC number: 1.1.1.262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675802.1
GO function: GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]
GO process: GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA
translation: MKKIGITLGDPSGISPEILIKSIDKLKKAIYVIYGSYKIIEKVSSILDKKTEINIIDSPEEAEKEGVYLINVYDRDFCVGKPDKETGKASVLFLERAVKDILSKKLDAIVTLPISKEYVMKAGFRYAGHTDYLADITKTEDYLMMLLCEKMKVALVTTHIPLKDVPENIKPEILESKIRLLNRELQSKFGIKKPKIAVLGLNPHAGDGGNIGREEIDIINPVVQKLKSEGIDLEGSLSADTAFNRYREFDAYLAMYHDQGLIPLKLLCFKKAVNITLGIPFIRTSPDHGTGFDIAGKGIADPSSFIEAVKLALKLSKQY
SIO_010081: PERMA_RS00615
subclass of: SO_0000673
so part of: PERMA_RS00615
location: complement(113409..114368)
location: region:113409-114368:-1
so has part: feature:113409-114368:-1:exon

WP_012675802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113409-114368:-1:exon

PERMA_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00620
old locus tag: PERMA_0125
so part of: sequence
location: complement(114372..114614)
location: region:114372-114614:-1
so has part: feature:114372-114614:-1:exon
subclass of: SO_0000010

position:114372:-1
position: 114372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114614:-1
position: 114614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114372-114614:-1:exon

PERMA_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00620
old locus tag: PERMA_0125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459641.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusB
translation: MVNTVWLIKRPADFPEADMLEKEDMIILIQDAVIRVPIIENWAACREDAVARNIKIPEDKLLNYEDIIDIIEKAEKVIVW
SIO_010081: PERMA_RS00620
subclass of: SO_0000673
so part of: PERMA_RS00620
location: complement(114372..114614)
location: region:114372-114614:-1
so has part: feature:114372-114614:-1:exon

WP_012675503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114372-114614:-1:exon

PERMA_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00625
old locus tag: PERMA_0126
so part of: sequence
location: complement(114608..114958)
location: region:114608-114958:-1
so has part: feature:114608-114958:-1:exon
subclass of: SO_0000010

position:114608:-1
position: 114608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114958:-1
position: 114958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114608-114958:-1:exon

PERMA_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00625
old locus tag: PERMA_0126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459642.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsrE family protein
translation: MAKKNLIFVIKSNPFSWKAFEALRQAVGCSMEHKVTVIFLKDGIYTLTDWKPQMIGIDPIDKSIDALGMMDATIVVEEEALRERGVKLKEWSTPVHIRSKDEICEIIKESEVVITW
SIO_010081: PERMA_RS00625
subclass of: SO_0000673
so part of: PERMA_RS00625
location: complement(114608..114958)
location: region:114608-114958:-1
so has part: feature:114608-114958:-1:exon

WP_012675870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114608-114958:-1:exon

PERMA_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00630
old locus tag: PERMA_0127
so part of: sequence
location: complement(114968..115270)
location: region:114968-115270:-1
so has part: feature:114968-115270:-1:exon
subclass of: SO_0000010

position:114968:-1
position: 114968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115270:-1
position: 115270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114968-115270:-1:exon

PERMA_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00630
old locus tag: PERMA_0127
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459643.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsrE family protein
translation: MNLLIIMASNPYSHDFNTAIKLAEASLNRNHTTKMFFMGNGLFSILRDEIKNLNEKGLKVYYCAHNAEQRKVKPESWAESSSMYGLAKLITEADKVIMLS
SIO_010081: PERMA_RS00630
subclass of: SO_0000673
so part of: PERMA_RS00630
location: complement(114968..115270)
location: region:114968-115270:-1
so has part: feature:114968-115270:-1:exon

WP_041530850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114968-115270:-1:exon

PERMA_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00635
old locus tag: PERMA_0128
so part of: sequence
location: complement(115267..115509)
location: region:115267-115509:-1
so has part: feature:115267-115509:-1:exon
subclass of: SO_0000010

position:115267:-1
position: 115267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115509:-1
position: 115509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115267-115509:-1:exon

PERMA_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00635
old locus tag: PERMA_0128
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012991156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA family protein
translation: MEEVKVDRELDLRGEVCPFTFVKSKLIIEQMEPGQVLKVILDYKPSVENVPKSMREEGQEVLEVKQIDKNLWEVIVRKVR
SIO_010081: PERMA_RS00635
subclass of: SO_0000673
so part of: PERMA_RS00635
location: complement(115267..115509)
location: region:115267-115509:-1
so has part: feature:115267-115509:-1:exon

WP_012676153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115267-115509:-1:exon

PERMA_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: moeB
locus tag: PERMA_RS00640
old locus tag: PERMA_0129
so part of: sequence
location: complement(115520..116338)
location: region:115520-116338:-1
so has part: feature:115520-116338:-1:exon
subclass of: SO_0000010

position:115520:-1
position: 115520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116338:-1
position: 116338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115520-116338:-1:exon

PERMA_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: moeB
locus tag: PERMA_RS00640
old locus tag: PERMA_0129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459645.1
GO function: GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-synthase adenylyltransferase MoeB
translation: MSFQFTEEQIKRYSRHIILPEVGGKGQQKLLDAKVLVIGAGGLGSPSLYYLAAAGVGTIGIVDFDVVDFSNLQRQILHSTERVGKPKVESAKMTLEALNPDVKVIAYNERIHKGNVIDIIKDYDVVLDGSDNFPTRFLINDACFFLGKPLVSAAILRFEGQLTTFDYRNKDESPCYRCLFPEPPPPGLVPSCQEAGLLGVVGGIMGTLQANEALKLILDIGEPLIGKLLVFDALTTEFNVVKLRKDKKCPLCGEKPVIKELIEYEQACDVHF
SIO_010081: PERMA_RS00640
subclass of: SO_0000673
so part of: PERMA_RS00640
location: complement(115520..116338)
location: region:115520-116338:-1
so has part: feature:115520-116338:-1:exon

WP_015898897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115520-116338:-1:exon

PERMA_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00645
old locus tag: PERMA_0130
so part of: sequence
location: complement(116414..117556)
location: region:116414-117556:-1
so has part: feature:116414-117556:-1:exon
subclass of: SO_0000010

position:116414:-1
position: 116414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117556:-1
position: 117556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116414-117556:-1:exon

PERMA_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00645
old locus tag: PERMA_0130
EC number: 1.13.12.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673963.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitronate monooxygenase family protein
translation: MSLPPLRIGQYEIQYPIIQGGMGVGISWENLAGTVSKYGGLGVVSSVGTGYRHPNYIKLKDGRPIGSKYIHNREALQRIIRDAKEIAGGEKAVIGVNILYAITDYGRVVRDSIEAGANIIITGAGLPLRLPEYAPEPHVALVPIVSSARALRVICKHWKKKYNRLPDAVVVEGPKSGGHQGIPYEDCFKPEFQLENIVPEVIKERDKWGDFPVIAAGGIWDKNDIEFYLSLGAAGVQMGTRFVGTFECDAAPEFKRVIIESKKEDIKLIKSPVGYPARGIITQLIKDIERGTAPEVKCTSNCVVPCNHGEEAKKVGFCIADRLGDAYLGRVQTGLFFSGSNGYRIKRLVSVKDLMRELVEGIPSGQEIPEGEPVESGKQL
SIO_010081: PERMA_RS00645
subclass of: SO_0000673
so part of: PERMA_RS00645
location: complement(116414..117556)
location: region:116414-117556:-1
so has part: feature:116414-117556:-1:exon

WP_012676270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116414-117556:-1:exon

PERMA_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00650
old locus tag: PERMA_0131
so part of: sequence
location: complement(117559..117990)
location: region:117559-117990:-1
so has part: feature:117559-117990:-1:exon
subclass of: SO_0000010

position:117559:-1
position: 117559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117990:-1
position: 117990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117559-117990:-1:exon

PERMA_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00650
old locus tag: PERMA_0131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459131.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKIVKFGQVQETEQSKDLVEESSKEIKTIFSKKPLYQKIWEGLEDYILHNFAVKNVLGMDFTYKENNLKEIGVLGILAYEHKRRNGTFVADFVGRGYIDTKKDKVIIDLVVFKAGERELYNSTIKILKAKKIYPELTFNEGE
SIO_010081: PERMA_RS00650
subclass of: SO_0000673
so part of: PERMA_RS00650
location: complement(117559..117990)
location: region:117559-117990:-1
so has part: feature:117559-117990:-1:exon

WP_012675671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117559-117990:-1:exon

PERMA_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: recJ
locus tag: PERMA_RS00655
old locus tag: PERMA_0132
so part of: sequence
location: 118090..119790
location: region:118090-119790:1
so has part: feature:118090-119790:1:exon
subclass of: SO_0000010

position:118090:1
position: 118090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119790:1
position: 119790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118090-119790:1:exon

PERMA_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: recJ
locus tag: PERMA_RS00655
old locus tag: PERMA_0132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288184.1
GO function: GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded-DNA-specific exonuclease RecJ
translation: MDSGLTGYKWVVLEEKNKAPEDLLKKFGKVIGQLLYNRKEIFNNNFEEENIYPTLKKLLDPQLFNKLDRISYELAKIIKDKKRIVIYGDYDADGITSTALLVNFFKDINADVRYYIPSRFYEGYGLNRSAIKKISQMADVLIVVDSGTNAYEELLYAKKLGLKVFVLDHHEAKEEIIDDEQIYILNPKLHDDIDVLFKHLASVGITFYVIIMLRRLLNLEVKLKPYLDIVALGTVADVVPLSLINRILVQKGIEEINKRRRTGIKALLDYLSIDKVTSFDVGFVLAPRLNAAGRLDDAKKAVKLLTTKNENKGRQLSIELEVLNKKRQKLTELAFKESQVKLKKEKEIKSIVVADENWHPGIVGIVAGRLAHQYKVPAVVLSVKNGTAIGSVRSTGNINIYKVMEENADLFDRFGGHTLAAGLTMPSKNIERFKEILIDYVSSLKEEDKISFIEVDMEVPLSHWTPENVKKLKILEPFGEGNPYPKFIARNLRIDDFITVGAGNQHLKFWFKDNDGKAYPALWWGSVGFFKKLSVGMNVDIIYTPKLSTWNGDLGVEFIVEDIKIN
SIO_010081: PERMA_RS00655
subclass of: SO_0000673
so part of: PERMA_RS00655
location: 118090..119790
location: region:118090-119790:1
so has part: feature:118090-119790:1:exon

WP_012676272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118090-119790:1:exon

PERMA_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00660
old locus tag: PERMA_0133
so part of: sequence
location: 119872..120474
location: region:119872-120474:1
so has part: feature:119872-120474:1:exon
subclass of: SO_0000010

position:119872:1
position: 119872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120474:1
position: 120474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119872-120474:1:exon

PERMA_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00660
old locus tag: PERMA_0133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675665.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin
translation: MSEVILVGQEVPDFEMETYEPETGKFGTFSLKKAKDEGKWTILFFYPADFTFVCPTELADLAEVYPKLKELGAEVVSVSTDTKFVHLAWHRDEKLLENVKYPMGADPTGKISRMFGVYDEATGLALRGTFIISPEGKLVGSEVNFYNVGRNADELLRKMEANAYLIGHPDEACPAKWEPGKKTLKPSEELVGHVYEALNE
SIO_010081: PERMA_RS00660
subclass of: SO_0000673
so part of: PERMA_RS00660
location: 119872..120474
location: region:119872-120474:1
so has part: feature:119872-120474:1:exon

WP_012675665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119872-120474:1:exon

PERMA_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00665
old locus tag: PERMA_0134
so part of: sequence
location: 121421..121636
location: region:121421-121636:1
so has part: feature:121421-121636:1:exon
subclass of: SO_0000010

position:121421:1
position: 121421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121636:1
position: 121636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121421-121636:1:exon

PERMA_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00665
old locus tag: PERMA_0134
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGDIERVWISGDKVFSVKTLEQFSVNLSAGRKHIKVSDDKMLSILHDLEKFEIALYYEGKVDKYVVERIKL
SIO_010081: PERMA_RS00665
subclass of: SO_0000673
so part of: PERMA_RS00665
location: 121421..121636
location: region:121421-121636:1
so has part: feature:121421-121636:1:exon

WP_012676551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121421-121636:1:exon

PERMA_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpsU
locus tag: PERMA_RS00670
old locus tag: PERMA_0135
so part of: sequence
location: 121683..121883
location: region:121683-121883:1
so has part: feature:121683-121883:1:exon
subclass of: SO_0000010

position:121683:1
position: 121683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121883:1
position: 121883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121683-121883:1:exon

PERMA_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpsU
locus tag: PERMA_RS00670
old locus tag: PERMA_0135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459901.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S21
translation: MAVVVVQEGESFEKALKRFKKICEKEGIITEMKRREFYEKPSVKRKRKQRAARKRLIKALKKKGLL
SIO_010081: PERMA_RS00670
subclass of: SO_0000673
so part of: PERMA_RS00670
location: 121683..121883
location: region:121683-121883:1
so has part: feature:121683-121883:1:exon

WP_012675899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121683-121883:1:exon

PERMA_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00675
old locus tag: PERMA_0136
so part of: sequence
location: 121894..122340
location: region:121894-122340:1
so has part: feature:121894-122340:1:exon
subclass of: SO_0000010

position:121894:1
position: 121894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122340:1
position: 122340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121894-122340:1:exon

PERMA_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00675
old locus tag: PERMA_0136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674366.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GatB/YqeY domain-containing protein
translation: MAELLKKLQDEMKAAMKSGDKEKLSTIRMLISEIKKVQIDQKKELSDDEIIAVIQRYAKQRKESIKQYREAGREDLAQKEEKELQIVQQFLPQPLTEEEIEKIVEETIKELNASSMKDMGKVMKAVMEKVKGRAEGAVVSSIVKSKLS
SIO_010081: PERMA_RS00675
subclass of: SO_0000673
so part of: PERMA_RS00675
location: 121894..122340
location: region:121894-122340:1
so has part: feature:121894-122340:1:exon

WP_012676812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121894-122340:1:exon

PERMA_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00680
old locus tag: PERMA_0137
so part of: sequence
location: 122343..122777
location: region:122343-122777:1
so has part: feature:122343-122777:1:exon
subclass of: SO_0000010

position:122343:1
position: 122343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122777:1
position: 122777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122343-122777:1:exon

PERMA_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00680
old locus tag: PERMA_0137
inference: COORDINATES: protein motif:HMM:NF014704.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CvpA family protein
translation: MLDIILLLFFIYLVIAGLFNGFTQIFIKGLGFLTAGYLGFSFTKDLSAYLSRYFNAEKVILDFVAFALIFILVFSVFLLINSIVKKELKSRKKLSIMDKLTGAIAGILIFVICVYMIKEFSKKNETLRELSSKSRIVKLFSWER
SIO_010081: PERMA_RS00680
subclass of: SO_0000673
so part of: PERMA_RS00680
location: 122343..122777
location: region:122343-122777:1
so has part: feature:122343-122777:1:exon

WP_012676162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122343-122777:1:exon

PERMA_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00685
old locus tag: PERMA_0139
so part of: sequence
location: 122765..123166
location: region:122765-123166:1
so has part: feature:122765-123166:1:exon
subclass of: SO_0000010

position:122765:1
position: 122765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123166:1
position: 123166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122765-123166:1:exon

PERMA_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00685
old locus tag: PERMA_0139
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKIKNPKIFYKNLFLFGIFFVAIFLMIRGYLLLYTDDLDVAQKVIKIGKAEIETVTGKKFETQIKGLKKNDDEIYIISDEGQIPLKDILYIDGKNINQKIIKNLSDRAIKGIFYVVSGGFIFLFLILIRNYI
SIO_010081: PERMA_RS00685
subclass of: SO_0000673
so part of: PERMA_RS00685
location: 122765..123166
location: region:122765-123166:1
so has part: feature:122765-123166:1:exon

WP_012676186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122765-123166:1:exon

PERMA_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00690
old locus tag: PERMA_0138
so part of: sequence
location: complement(123163..123642)
location: region:123163-123642:-1
so has part: feature:123163-123642:-1:exon
subclass of: SO_0000010

position:123163:-1
position: 123163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123642:-1
position: 123642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123163-123642:-1:exon

PERMA_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00690
old locus tag: PERMA_0138
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673752.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsrE/DsrF/DrsH-like family protein
translation: MATRVGIIVLSGTLDKVMPAFILGTTAAAMGMEVGMFFSFYGINVVHKEKYKNLKVSPVGNPAMPMPMPVPQILTIMPGMVDFATNMMKKMMAENKVPSVEELIKQAQDLGVKMYPCQTAMQLFGYKVEDLIDGLEKPAGAATFLNFVNAGEKSIVMNF
SIO_010081: PERMA_RS00690
subclass of: SO_0000673
so part of: PERMA_RS00690
location: complement(123163..123642)
location: region:123163-123642:-1
so has part: feature:123163-123642:-1:exon

WP_012675329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123163-123642:-1:exon

PERMA_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rseP
locus tag: PERMA_RS00695
old locus tag: PERMA_0140
so part of: sequence
location: complement(123679..125001)
location: region:123679-125001:-1
so has part: feature:123679-125001:-1:exon
subclass of: SO_0000010

position:123679:-1
position: 123679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125001:-1
position: 125001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123679-125001:-1:exon

PERMA_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rseP
locus tag: PERMA_RS00695
old locus tag: PERMA_0140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008287119.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RIP metalloprotease RseP
translation: MISVIAFLIMIGILITIHEFGHFLFARLFGVKVEVFSIGFGPPLIKWKGKETLYQIAVIPLGGYVKMYGEDSMTEPVQGEVDKAAFEDPRSFYAKPRWQKILIAFAGPLFNIVLAVILFASAYMIGIHEPKYLKEPVVVGYVHPGSVAEKVGIKPYDRIVAVDGKPIKNWKEFTIAIGMKAAKSAVIEIDRNGEKIVLNIQVPHDITKEPLGISPVIPAKIGQVMKGSPAEKAGLQKGDEIIAFNGKPVRSWFELVDTLSTIKEKKEITLLVRRDGKVFPVKVTPEFNKELNKYVLGISPKMDTTIVKYGFTESFEKAIEKSKELTVAIYNVIKGLITGEVSLKTLGGPIAIAQFSGQALETGLAAFLFSIAFISLQLGYLNLLPIPVLDGGLIAILLIEMIIRRPLPEKAKEYLAYIGFALLGTLMIFVIFNDIMRALS
SIO_010081: PERMA_RS00695
subclass of: SO_0000673
so part of: PERMA_RS00695
location: complement(123679..125001)
location: region:123679-125001:-1
so has part: feature:123679-125001:-1:exon

WP_012676297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123679-125001:-1:exon

PERMA_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: dxr
locus tag: PERMA_RS00700
old locus tag: PERMA_0141
so part of: sequence
location: complement(125013..126134)
location: region:125013-126134:-1
so has part: feature:125013-126134:-1:exon
subclass of: SO_0000010

position:125013:-1
position: 125013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126134:-1
position: 126134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125013-126134:-1:exon

PERMA_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: dxr
locus tag: PERMA_RS00700
old locus tag: PERMA_0141
EC number: 1.1.1.267
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676935.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]
GO process: GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
translation: MKRLAVLGSTGSIGTQTLDIVRKYRDRLEVSLLAASRVSEKLLDQIDEFKPEYVYIAEGEKIKGVKTLIGEDGLYKLAQLDIDLFINGISGINGILPTYLLLENNKKLATANKEAIICLGEIYGDKYSDIFPIDSEHSAIFQCLLSGRKEEVEKIILTASGGPFLNLPKEEFRYITPDQALNHPRWKMGKKVSIDSATLMNKGFEIIEAHYLFNIPYSKIDVVIHPESIVHGLVQFIDGSVISHLSPPDMRIPICYAISYPERWEIDVRRLNLAQVKNLTFLEPDYDRFPLLNIAKECGEKGGACPTVLTTADEIAVNLFLEGKITFDMIPVYIQQVLDQADFSKPETFEDIIFIIKETEKIFWNILKLQNVN
SIO_010081: PERMA_RS00700
subclass of: SO_0000673
so part of: PERMA_RS00700
location: complement(125013..126134)
location: region:125013-126134:-1
so has part: feature:125013-126134:-1:exon

WP_012676935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125013-126134:-1:exon

PERMA_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00705
old locus tag: PERMA_0142
so part of: sequence
location: complement(126145..126750)
location: region:126145-126750:-1
so has part: feature:126145-126750:-1:exon
subclass of: SO_0000010

position:126145:-1
position: 126145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126750:-1
position: 126750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126145-126750:-1:exon

PERMA_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00705
old locus tag: PERMA_0142
inference: COORDINATES: protein motif:HMM:NF024590.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin family protein
translation: MFPEGADTFLKKRFNELIDPVKLILRKSGKDIDRDIEKVLESISTFSEKISIEINESLSCIDAPCISIQTTEKDFGIRFMGKPDGGEFKTFIDTIVMVSRNEYDLSERTVELIEQIDRPVEIKVFITNTCGWCPPAVLKSYSFAMVNEYITATAIDCYIFSDLAVKYNVATVPKIVINDKVEQIGLKDENQLLGSIFASIS
SIO_010081: PERMA_RS00705
subclass of: SO_0000673
so part of: PERMA_RS00705
location: complement(126145..126750)
location: region:126145-126750:-1
so has part: feature:126145-126750:-1:exon

WP_012675539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126145-126750:-1:exon

PERMA_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00710
old locus tag: PERMA_0143
so part of: sequence
location: complement(126834..127535)
location: region:126834-127535:-1
so has part: feature:126834-127535:-1:exon
subclass of: SO_0000010

position:126834:-1
position: 126834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127535:-1
position: 127535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126834-127535:-1:exon

PERMA_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00710
old locus tag: PERMA_0143
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459343.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit I
translation: MGIKKVGMNVNVQPQSIVEKIFFLDFAKGLATTIKHLFRKVITVDFPYEVVVPAPRFRGVHGLRNVDGTELPDFDAWVKKLKIKPPEMGETRCIGCKFCQAACPVPEIFTIKTEKLDVPEDHPHHGLKVVSQFDMDLGKCMFCGLCTLACPTACIIHTDIYDLSSYTRRGWVLDKEKLSKIADDFVSRRREEKFDEHSFWPDTQKIFPEYDKARAKAWDNNPPKLGPNYADQQ
SIO_010081: PERMA_RS00710
subclass of: SO_0000673
so part of: PERMA_RS00710
location: complement(126834..127535)
location: region:126834-127535:-1
so has part: feature:126834-127535:-1:exon

WP_012675877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:126834-127535:-1:exon

PERMA_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00715
old locus tag: PERMA_0144
so part of: sequence
location: complement(127551..129284)
location: region:127551-129284:-1
so has part: feature:127551-129284:-1:exon
subclass of: SO_0000010

position:127551:-1
position: 127551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129284:-1
position: 129284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127551-129284:-1:exon

PERMA_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00715
old locus tag: PERMA_0144
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459344.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit D
translation: MSWITLDKAKRLEEKFDFVKVLENEQATVLEVPKENLIQFLKFLKEDPDYLFKMFIDWTIIDHGKKADPRFQGVVILFSPEYKERIIVKTWATDETLPTLTTLWSGAKWAEREAWDMFGIKFEGHDHLVRMFLWEGYPYHPLRKDFPVRGIEEVELPSLNETERMDQLEGMMNYSRMHTALPTLEDLERTQKIRMPEKSSQVVLNWGPLHPGTHGTIWFLFDMEGEYVKKCDIIIGQLHRGIEKLAENLNVQQIIPYTDRMDYIASINENHSVCVAAEKLLGIHEKIPEKAKYIRTMMAELSRINSHLLWLGTYALDLGALTMFLYTFREREKIMDIFEGISGARFTINYFRVGGVYADLPYGALDAIEHFLKDFPTRLADYERLLTRNRIWLKRNVDVCIITEEDVYDYGLTGAVARASGVPYDLRKIDKYDAYGEVDFDVPVGEKGDSYDRYLVRIEEIRQSVRIINQCIEKLRKMSKNDPFFYEPEDKKMKITIDGRGTKLKKGEVYAGTDNPRGELGVYIYMPKDGIKPHRFRLRSGAFYNLQIFTKAIIGRPIADAITLLSTIDPVVGETDR
SIO_010081: PERMA_RS00715
subclass of: SO_0000673
so part of: PERMA_RS00715
location: complement(127551..129284)
location: region:127551-129284:-1
so has part: feature:127551-129284:-1:exon

WP_012675293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127551-129284:-1:exon

PERMA_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00720
old locus tag: PERMA_0146
so part of: sequence
location: 129403..129915
location: region:129403-129915:1
so has part: feature:129403-129915:1:exon
subclass of: SO_0000010

position:129403:1
position: 129403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129915:1
position: 129915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129403-129915:1:exon

PERMA_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00720
old locus tag: PERMA_0146
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidylglycerophosphatase A
translation: MKEKDIVTEENMPEESFKVMVAYMLSTGLYAGKIPVAPGTIGTVVGLIPILIYWTKGGSYMLINQIFITLAVFFVGIWASTVVVETFKEKDPDYVVIDEIAGYMVAMIGIEPTWQNLLIAFILFRFFDILKPPPIRFFERLPSGLGVMADDIIAGLYVLGIMHLLTRFVL
SIO_010081: PERMA_RS00720
subclass of: SO_0000673
so part of: PERMA_RS00720
location: 129403..129915
location: region:129403-129915:1
so has part: feature:129403-129915:1:exon

WP_012676321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129403-129915:1:exon

PERMA_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00725
old locus tag: PERMA_0145
so part of: sequence
location: complement(129912..130214)
location: region:129912-130214:-1
so has part: feature:129912-130214:-1:exon
subclass of: SO_0000010

position:129912:-1
position: 129912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130214:-1
position: 130214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129912-130214:-1:exon

PERMA_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00725
old locus tag: PERMA_0145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVKKVSFLPAFFIWGIVYAVVDLIFTLFSIKNISFYTVEGGYDITLKILTALFLQTFSLSIYFKWVFKEGIFLSFIKALSVSSFLYVFIYILLTGMYLQF
SIO_010081: PERMA_RS00725
subclass of: SO_0000673
so part of: PERMA_RS00725
location: complement(129912..130214)
location: region:129912-130214:-1
so has part: feature:129912-130214:-1:exon

WP_012676686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129912-130214:-1:exon

PERMA_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00730
old locus tag: PERMA_0148
so part of: sequence
location: 130310..131323
location: region:130310-131323:1
so has part: feature:130310-131323:1:exon
subclass of: SO_0000010

position:130310:1
position: 130310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131323:1
position: 131323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130310-131323:1:exon

PERMA_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00730
old locus tag: PERMA_0148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460250.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: agmatine deiminase family protein
translation: MERFRMPAEWEKHKGTITTYPQAYETFFDRLDQARDQFVQMVKYISEGETVYINVNGEEEKKDLLKRLERFNVNGDVRILINKTDDAWCRDYCPIFVKDSEGNTVALKFRFNSWGGKYPYENDEKTGNKIPEILGYKKINIDMVLEGGSVEVNGNGVLLTTESCLLNPNRNPDLSKEEIEEKLRFYLGVNRIFWLGEGIIGDDTDGHIDDITRFVSKDTVVTAFEDNRNDPNYYPLIENYKRLKSLKEFNIVKIPMPDPVYYKYPGDDKPYRLPASYVNFYISNKAVVVPVFNCDKDEIALETLRKLFPDREVIGIYAYDIVIGLGAFHCLTQQIPE
SIO_010081: PERMA_RS00730
subclass of: SO_0000673
so part of: PERMA_RS00730
location: 130310..131323
location: region:130310-131323:1
so has part: feature:130310-131323:1:exon

WP_015898964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130310-131323:1:exon

PERMA_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00735
old locus tag: PERMA_0147
so part of: sequence
location: complement(131274..131888)
location: region:131274-131888:-1
so has part: feature:131274-131888:-1:exon
subclass of: SO_0000010

position:131274:-1
position: 131274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131888:-1
position: 131888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131274-131888:-1:exon

PERMA_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00735
old locus tag: PERMA_0147
inference: COORDINATES: protein motif:HMM:NF019844.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing protein
translation: MIKYLVLSLVIIIMIALDIVLIQEFLYQHKQEEKIPQSANRIDTGPVTTEPQLSAKTEKIKIDSISESEKKEITQTVEEEVSHTADMHITDLSEKKEKPVMEDQTDQISLQDTAKPEESIKPLKAVSTVWLNLRENPRLDSEVLTVINKGDSVLVIDQRFNHWKKVIYIKDDQVYTGWVDDRYLRILEPTQESAVSDSEKPQDQ
SIO_010081: PERMA_RS00735
subclass of: SO_0000673
so part of: PERMA_RS00735
location: complement(131274..131888)
location: region:131274-131888:-1
so has part: feature:131274-131888:-1:exon

WP_012675319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131274-131888:-1:exon

PERMA_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00740
old locus tag: PERMA_0149
so part of: sequence
location: complement(131885..132349)
location: region:131885-132349:-1
so has part: feature:131885-132349:-1:exon
subclass of: SO_0000010

position:131885:-1
position: 131885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132349:-1
position: 132349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131885-132349:-1:exon

PERMA_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00740
old locus tag: PERMA_0149
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleoside deaminase
translation: MSEDIKFLDIAYEEALKAYEKDEVPIGAVIVKDGEIIGKGHNQRIEKNNALYHAEIVAIEEACRNTGSWRLDGCTLYVTVEPCVMCAGAIMQSRIKKVVFGALDQKGGAVVSKYRLFDDGKLPFKVDYSLINYEKASIILKDFFLNKRRVSRER
SIO_010081: PERMA_RS00740
subclass of: SO_0000673
so part of: PERMA_RS00740
location: complement(131885..132349)
location: region:131885-132349:-1
so has part: feature:131885-132349:-1:exon

WP_012676053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131885-132349:-1:exon

PERMA_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: cmk
locus tag: PERMA_RS00745
old locus tag: PERMA_0150
so part of: sequence
location: complement(132365..133021)
location: region:132365-133021:-1
so has part: feature:132365-133021:-1:exon
subclass of: SO_0000010

position:132365:-1
position: 132365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133021:-1
position: 133021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132365-133021:-1:exon

PERMA_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: cmk
locus tag: PERMA_RS00745
old locus tag: PERMA_0150
EC number: 2.7.4.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460018.1
GO function: GO:0004127 - cytidylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: (d)CMP kinase
translation: MIIAIDGPAGSGKSTVAKKLSRILGYTYIDTGAMYRAVAYKVKEEGIDPDNPDAVVNIMKRINIKLEPSDNGVKVFLDGEDVSSKIRTEEIGKIASKIARHPEVRKILVQKQREMGKKAKNAVIEGRDTGTVIFPDADLKIFMTASPEVRARRRWEELKNKGLDIDYNRILKEVKERDHLDQTRKDSPLRPAKDAIIIDTTNKSIDEVINQILELVRK
SIO_010081: PERMA_RS00745
subclass of: SO_0000673
so part of: PERMA_RS00745
location: complement(132365..133021)
location: region:132365-133021:-1
so has part: feature:132365-133021:-1:exon

WP_012676511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132365-133021:-1:exon

PERMA_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00750
old locus tag: PERMA_0151
so part of: sequence
location: complement(133023..134948)
location: region:133023-134948:-1
so has part: feature:133023-134948:-1:exon
subclass of: SO_0000010

position:133023:-1
position: 133023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134948:-1
position: 134948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133023-134948:-1:exon

PERMA_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00750
old locus tag: PERMA_0151
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674825.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycoside hydrolase family 15 protein
translation: MYREAVVANSQMFANFDKYLSMRDLYFPYVGQYNHLSGNKNHLIVCVNGEISFLDKGWEKSFGYKKDALITDIKAVNYDLRIQLNINDMIHKYMPVYIRKLKVKNLSSHKKDVKIFFYHDFRLNETTVGNTALYHPDLKGVVHYREATYLFISICPEISEYTIKKKEESSILEIENGSLSMNPIARGDIDSAVSYNIELDGNEEKEFYYYIVAGHSFDDIEEKLIKLRADTTEHFVEETEIYWKAWLNERKEIKRSIDDEIKELYDRSLLIIKAHMDKDGSIIASADSSIFQRFNKDHYAYSWPRDNSFIVMALDRAGYGHATKRFFEFCVRTLTKKGYFLQKYLPDGSFGSSWHPWIDEKGNPQLPIQEDETALVIWALFSHYQETKDVEFIDRIYNQLVRPAAYFMMNYRDRETGLPRESYDPWEERRGVGTYTCATVFAGLLSASKLAHLTGNLDEARKFKDVAEEVREGILKYLYDESENRFIRMLYRDSSGKIKKDKTVDASLMAVFFTGLLPPDDYRVINTVNAIREKLWIDEGIKGLARFENDEYHRISEKYPGNPWIVTTMWLADWYIAVEKIDEAVELLRWAVKRKSQAGLLAEQYNPETGDPISVTPLTWSHAAFCYTVQNLNKKLYEMGI
SIO_010081: PERMA_RS00750
subclass of: SO_0000673
so part of: PERMA_RS00750
location: complement(133023..134948)
location: region:133023-134948:-1
so has part: feature:133023-134948:-1:exon

WP_012675594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133023-134948:-1:exon

PERMA_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: moaD
locus tag: PERMA_RS00755
old locus tag: PERMA_0152
so part of: sequence
location: complement(134951..135196)
location: region:134951-135196:-1
so has part: feature:134951-135196:-1:exon
subclass of: SO_0000010

position:134951:-1
position: 134951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135196:-1
position: 135196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134951-135196:-1:exon

PERMA_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: moaD
locus tag: PERMA_RS00755
old locus tag: PERMA_0152
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674372.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
GO process: GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin converting factor subunit 1
translation: MKVKVLYFSSLKDRIKKSQEVIDIKEKTTVGEFIKILKERYPELEKNFDNVMIAVNEEYASSDQVLKEGDTVAIIPPVSGG
SIO_010081: PERMA_RS00755
subclass of: SO_0000673
so part of: PERMA_RS00755
location: complement(134951..135196)
location: region:134951-135196:-1
so has part: feature:134951-135196:-1:exon

WP_012676443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134951-135196:-1:exon

PERMA_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00760
old locus tag: PERMA_0153
so part of: sequence
location: complement(135186..135851)
location: region:135186-135851:-1
so has part: feature:135186-135851:-1:exon
subclass of: SO_0000010

position:135186:-1
position: 135186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135851:-1
position: 135851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135186-135851:-1:exon

PERMA_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00760
old locus tag: PERMA_0153
EC number: 1.1.1.302
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546242.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase
translation: MQRPYTIIVSEVTVDGKLTLRRGRSSKEIMQFMDDEANRYLHELRAKVDGIMVGAETIRTDNPFLTVRYVEGKNPTRIVPTSKADIPLDANILEKHAPTIIVTSESAPEEKVKALKEKVEVIISGKDQVDLIEMMDTLYRKGIKTLMVEGGSTLNWNLIKFGLVDEIRLIHMPFIVGGEDTPTLVGGEGFYSLNDVVKTKLRAHFMRGSHLITEWEIKFEG
SIO_010081: PERMA_RS00760
subclass of: SO_0000673
so part of: PERMA_RS00760
location: complement(135186..135851)
location: region:135186-135851:-1
so has part: feature:135186-135851:-1:exon

WP_012675560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135186-135851:-1:exon

PERMA_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00765
old locus tag: PERMA_0154
so part of: sequence
location: complement(135901..136524)
location: region:135901-136524:-1
so has part: feature:135901-136524:-1:exon
subclass of: SO_0000010

position:135901:-1
position: 135901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136524:-1
position: 136524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135901-136524:-1:exon

PERMA_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00765
old locus tag: PERMA_0154
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458962.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-alcohol phosphatidyltransferase family protein
translation: MNLTSKRKSLKKIYEPIGILFAKTHITPNVITVISVIVGIFAAMAFYNHKPLTGAILLFMSGFFDLMDGVVARETERSSKFGAVFDWLADKFVDGIVLFSIGMAYSTPVVTILAVVSSMLHTFIKPVAYAEIGFENREKGKINDPLEGIGFFGRPESMLVIILFAVFEHFHILGGLQFGFVLVTVLTILSLLQRIIYLYIKYNRDYD
SIO_010081: PERMA_RS00765
subclass of: SO_0000673
so part of: PERMA_RS00765
location: complement(135901..136524)
location: region:135901-136524:-1
so has part: feature:135901-136524:-1:exon

WP_012676207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135901-136524:-1:exon

PERMA_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ilvC
locus tag: PERMA_RS00770
old locus tag: PERMA_0155
so part of: sequence
location: complement(136535..137533)
location: region:136535-137533:-1
so has part: feature:136535-137533:-1:exon
subclass of: SO_0000010

position:136535:-1
position: 136535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137533:-1
position: 137533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136535-137533:-1:exon

PERMA_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ilvC
locus tag: PERMA_RS00770
old locus tag: PERMA_0155
EC number: 1.1.1.86
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546238.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ketol-acid reductoisomerase
translation: MAKVYYDEDASLEVLKGKTVAIIGYGSQGHAHALNLRDSGVNVIIGLYSGSRSAEKAKAEGFEVLIPDEAAKKADIIMMLIPDTIQPEVYETAILPNLDEGNALAFAHGFNIHFNQIVPPEYVDVFLVAPKGPGHLVRWQYEEGKGVPGLVAVHQDFTGQAKDIALAYAKGVGCTRAGLIETTFKEETETDLFGEQAVLCGGATALIKAGFETLVEAGYQPEVAYFECLHELKLIVDLIYQYGISGMRYSISDTARYGDVTRGDRIYEAVKPIHKKILDEIQRGEFAKEWVLENIARRPHFDALVKRDEEHPVEKVGKELRKMMPWLEGKGL
SIO_010081: PERMA_RS00770
subclass of: SO_0000673
so part of: PERMA_RS00770
location: complement(136535..137533)
location: region:136535-137533:-1
so has part: feature:136535-137533:-1:exon

WP_012675393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136535-137533:-1:exon

PERMA_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00775
old locus tag: PERMA_0156
so part of: sequence
location: complement(137578..138198)
location: region:137578-138198:-1
so has part: feature:137578-138198:-1:exon
subclass of: SO_0000010

position:137578:-1
position: 137578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138198:-1
position: 138198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137578-138198:-1:exon

PERMA_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00775
old locus tag: PERMA_0156
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFFILILLLAVTGANAETVAIKRPEVKNLPRGYSPVIFSFFEEHFKNVVKYPTEKDYTYLIQPVVSWIATSYNVCLNVYKKGKLVDIHCSVSFSAEDLHDDLEKLSISTGILEKKKDQKTKYIYIKLIGKGNLKGDRLKIVSSKGDILVDYKNLIEKADGDFITVSNAVINIDTAYIQSFEAAKLLEYLLNNYKVKGILIIKIY
SIO_010081: PERMA_RS00775
subclass of: SO_0000673
so part of: PERMA_RS00775
location: complement(137578..138198)
location: region:137578-138198:-1
so has part: feature:137578-138198:-1:exon

WP_015898923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137578-138198:-1:exon

PERMA_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ilvN
locus tag: PERMA_RS00780
old locus tag: PERMA_0157
so part of: sequence
location: complement(138195..138761)
location: region:138195-138761:-1
so has part: feature:138195-138761:-1:exon
subclass of: SO_0000010

position:138195:-1
position: 138195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138761:-1
position: 138761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138195-138761:-1:exon

PERMA_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ilvN
locus tag: PERMA_RS00780
old locus tag: PERMA_0157
EC number: 2.2.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546234.1
GO function: GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO process: GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetolactate synthase small subunit
translation: MSENLTTVKIRPETKTEIRKHVIIVRVLHNFGVLTRITSLFAGRGYNIESLTVGKTNEPNIARITIVVEGDERIIEQIIKQLRKLIETVRVRDITNVPHIERELALIKVHAGEDRARDEIMRLVSIFRAKVVDVYTDTYTVEITGDREKIEAFIDLLRPFGIKDIARTGLLAITRESAKRKLEERMVE
SIO_010081: PERMA_RS00780
subclass of: SO_0000673
so part of: PERMA_RS00780
location: complement(138195..138761)
location: region:138195-138761:-1
so has part: feature:138195-138761:-1:exon

WP_012676152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138195-138761:-1:exon

PERMA_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ilvB
locus tag: PERMA_RS00785
old locus tag: PERMA_0158
so part of: sequence
location: complement(138783..140528)
location: region:138783-140528:-1
so has part: feature:138783-140528:-1:exon
subclass of: SO_0000010

position:138783:-1
position: 138783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140528:-1
position: 140528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138783-140528:-1:exon

PERMA_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ilvB
locus tag: PERMA_RS00785
old locus tag: PERMA_0158
EC number: 2.2.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673975.1
GO component: GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO function: GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO process: GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biosynthetic-type acetolactate synthase large subunit
translation: MPKKRGADIVIDVLLEEGVDTVFGLPGGAIMEVYDALFDAPLRNILARHEQAAAHMADGYARATGKVGVVLATSGPGATNLVTGIATAYMDSVPLVAITGQVPTSYIGTDAFQEADVVGITRPITKHNFLVTDIKDLALILREAFYLARTGRPGPVLVDIPKDITQQEYDYKMPTEKDVLDALPGYKPHYEGNPFQIKKAAELIRKAKRPVLYVGGGTVISGASEELRELAELTRIPVTTTNMAKGAFDETHPLALHMLGMHGTYYANMAVYHSDLLIAVGARFDDRVTGKIQEFAPEAKIIHIDIDPASISKNITVDVPIVGDVKVVLGKLLKELKKKPIEWVKARESWLKQIEKWKEKHPLTYDRTSKIIKPQYVIEEIYKITDGEALITAGVGQHQMWAAMFYKYRYPRQFLNSGGLGTMGYGFPAAVGAKIGNPDKTVFAIEGDGSFVMNMQDVITAVQYRIPVKIAIINNEFLGMVRQWQQLFYDSRYSSVCLAVHPDFVKLAESMGAVGLRATKPEEVRPVLEKAMKINDRPVIMDFVVDREENVLPMVPAGKSYREMIVSPKQKGEAETMYLVG
SIO_010081: PERMA_RS00785
subclass of: SO_0000673
so part of: PERMA_RS00785
location: complement(138783..140528)
location: region:138783-140528:-1
so has part: feature:138783-140528:-1:exon

WP_012676796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138783-140528:-1:exon

PERMA_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: trmFO
locus tag: PERMA_RS00790
old locus tag: PERMA_0159
so part of: sequence
location: complement(140626..141936)
location: region:140626-141936:-1
so has part: feature:140626-141936:-1:exon
subclass of: SO_0000010

position:140626:-1
position: 140626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141936:-1
position: 141936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140626-141936:-1:exon

PERMA_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: trmFO
locus tag: PERMA_RS00790
old locus tag: PERMA_0159
EC number: 2.1.1.74
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675714.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0047151 - methylenetetrahydrofolate-tRNA-(uracil-5-)- methyltransferase (FADH2-oxidizing) activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO
translation: MGKVAVIGAGLAGSEAAFKIATSGFKVDLYEMRPVKTTPAHRTEGFAELVCSNSLGGKDITTGSGLLKEEMRLLGSLIVSVAEEFSVPAGGALAVDRVKFSRRITEILENHPNIKVIRKEVTQLPEGYNFIIIATGPLTSEAFSKVIQRLTGSEYLYFYDAIAPTVDADTVDFSKGFWGDRYGKGKGDYFNCVLNEEEYEIFYNELINGKQVPLKDFEKAVFFEGCLPIEEMARRGKQTLLFGPMKPVGLIDPKTGKQPFAVIQLRKENREGTLLSLVGFQTKLKYPEQKRIFRLIPALKDATFVRLGSIHRNTFIQSHRVLKPTLQLKKDPRILFAGQITGVEGYAASAATGILAGINVVRMLKGKEPTVPPETTMLGGLVRYITEPKEELQPMNPNFSLLPDLDKKVRDKRRRKLLKAERALKDMEIFASQWKN
SIO_010081: PERMA_RS00790
subclass of: SO_0000673
so part of: PERMA_RS00790
location: complement(140626..141936)
location: region:140626-141936:-1
so has part: feature:140626-141936:-1:exon

WP_012675714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140626-141936:-1:exon

PERMA_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00795
old locus tag: PERMA_0160
so part of: sequence
location: complement(141944..143152)
location: region:141944-143152:-1
so has part: feature:141944-143152:-1:exon
subclass of: SO_0000010

position:141944:-1
position: 141944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143152:-1
position: 143152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141944-143152:-1:exon

PERMA_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00795
old locus tag: PERMA_0160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012963807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation:proton antiporter
translation: MEMHEFILDLFLILISARIFAEIFSYMKMPPVLGEVFAGILLGPSLLGIVEVNDIIRIIAEIGIILLLFEVGLETDIKKLQKEGVKSVIVALFGAIVPFVGGFAVSYYMFNLPLIVSLFIGGTLTATSIGITIRVLKDLGKERSSAAQVVVGAAVLDDVIGVILLVILADFALTGEVNMENTIKIILLVAFFFTAAPILAAIMSKFIHMYDSRYRRLPGFIPTIVVSLILFFAYVAHLFGAPEIIGAFAAGIALSRRFFLPFGIALKADPNFVDKLESQMRPLIYLFTPIFFVTVGLSMNLRVIDFTSADFWLLTLVLMVVAVVGKLGGAFLIRRMDNLKRIIIGTSMIPRGEVGLIFAELGRSVKIFTNEIYSVLVFIVILTTLVPPFVLKYLFKLEKDKG
SIO_010081: PERMA_RS00795
subclass of: SO_0000673
so part of: PERMA_RS00795
location: complement(141944..143152)
location: region:141944-143152:-1
so has part: feature:141944-143152:-1:exon

WP_015898850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141944-143152:-1:exon

PERMA_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00800
old locus tag: PERMA_0161
so part of: sequence
location: complement(143230..143649)
location: region:143230-143649:-1
so has part: feature:143230-143649:-1:exon
subclass of: SO_0000010

position:143230:-1
position: 143230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143649:-1
position: 143649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143230-143649:-1:exon

PERMA_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00800
old locus tag: PERMA_0161
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdenum cofactor biosynthesis protein MoaE
translation: MKMSVPQVYIGENWFDINDILNSYRDETAGAVDIFLGIPRSAPEDGDVIELHYEAYISMAEKIIKEIIDEAKEKFGIKHAVVHHRTGIVPVTVPSFLVAVWSGHRQEAFEACRYIVDETKARAPIWKKEVFRTGEESWK
SIO_010081: PERMA_RS00800
subclass of: SO_0000673
so part of: PERMA_RS00800
location: complement(143230..143649)
location: region:143230-143649:-1
so has part: feature:143230-143649:-1:exon

WP_148206389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143230-143649:-1:exon

PERMA_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00805
old locus tag: PERMA_0162
so part of: sequence
location: complement(143653..144174)
location: region:143653-144174:-1
so has part: feature:143653-144174:-1:exon
subclass of: SO_0000010

position:143653:-1
position: 143653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144174:-1
position: 144174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143653-144174:-1:exon

PERMA_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00805
old locus tag: PERMA_0162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459779.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin fold domain-containing protein
translation: MLRVLTAFLIIIGIFTASCQQKTEGGVSEKFKVDPEPVIKEAMKEKKFLILIFESEDCKYCTKLHKEVLNDLDFKQSLVKNKTAIAIINVYGEREVTDPETKQKMNEQALTFAYRVQGYPTIVVFDPAKDYKPIYTIPGYVEKRDFISLLDFLGSNCYQKVQYEKFVENGKSC
SIO_010081: PERMA_RS00805
subclass of: SO_0000673
so part of: PERMA_RS00805
location: complement(143653..144174)
location: region:143653-144174:-1
so has part: feature:143653-144174:-1:exon

WP_012676417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143653-144174:-1:exon

PERMA_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00810
old locus tag: PERMA_0163
so part of: sequence
location: complement(144189..145364)
location: region:144189-145364:-1
so has part: feature:144189-145364:-1:exon
subclass of: SO_0000010

position:144189:-1
position: 144189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145364:-1
position: 145364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144189-145364:-1:exon

PERMA_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00810
old locus tag: PERMA_0163
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674279.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxal phosphate-dependent aminotransferase
translation: MEFSQRVLRVQPSQTLVITAKAAELRKKGIDIIGFGAGEPDFDTPDFVKEAAIKALKEGKTRYTPAAGIPELREGIAKRLKEKNGIEYSPSEVIVTPGAKMGLYEVFSVILNPGDQVIVPAPYWVSYTEQIKLCDGEPVILELSEENGFVLTADKLKEAITERTKALVLNTPSNPTGAVIPRSELERIAQVCLENNILIISDECYEEFCYDEEHVSIASLSKEVRDITFTVNAFSKSYSMTGWRLGWVAAPEEYIKKITVVQSQTISNPTSFAMYGALAALEDGGKFPAMMKEEFRKRRDFVIEQFLSIDGITCPVPKGAFYAFPNVKAYIVGDIKDDIELTAYLLEEAKVAVVPGSAFGKEGYIRLSYATSMDNLKEGMRRIKEALSKLR
SIO_010081: PERMA_RS00810
subclass of: SO_0000673
so part of: PERMA_RS00810
location: complement(144189..145364)
location: region:144189-145364:-1
so has part: feature:144189-145364:-1:exon

WP_012675214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144189-145364:-1:exon

PERMA_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00815
old locus tag: PERMA_0164
so part of: sequence
location: 145449..146267
location: region:145449-146267:1
so has part: feature:145449-146267:1:exon
subclass of: SO_0000010

position:145449:1
position: 145449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146267:1
position: 146267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145449-146267:1:exon

PERMA_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00815
old locus tag: PERMA_0164
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459595.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlyA family RNA methyltransferase
translation: MAKKERIDKLLVERGLVESREKAQRLIMAGCVFVNDQRVDKPGTKIPVDANIFLKEKEKYVSRGGYKLEKGIEYFDFNPENKVCIDIGSSTGGFTDCLLQNGAKKVYAVDVGTHQLHEKLRNDPRVVVMEKTNARYLSEKDFPQKLECFVSDVSFISILKILPEICSIFEDFAEGIILIKPQFELSKKEVKDGVVKDPELHKKAILNVIKGLEKSCYCVKGITYSPVKGPKGNIEFLCYLFKKPEGFRCEEKIDESYIMEVVMEAHRALRKD
SIO_010081: PERMA_RS00815
subclass of: SO_0000673
so part of: PERMA_RS00815
location: 145449..146267
location: region:145449-146267:1
so has part: feature:145449-146267:1:exon

WP_012676641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145449-146267:1:exon

PERMA_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00820
old locus tag: PERMA_0166
so part of: sequence
location: 146270..147160
location: region:146270-147160:1
so has part: feature:146270-147160:1:exon
subclass of: SO_0000010

position:146270:1
position: 146270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147160:1
position: 147160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146270-147160:1:exon

PERMA_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00820
old locus tag: PERMA_0166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459200.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
translation: MEVLDYHKLKIFKTVADTGSFSKAAQLLFLSQPTVTLQIKKIENYLGVTLFKRDKKSISLTEEGKILYSYASKIIEDYLLMEENLSHIKENIRKNLVLGASTTVGEFFLPEIISNFLKKIPDIKIHLFIGNSKEIEEGILSKSFYIGVIEDEVSSNKLEVVGFFKDEIILIGANTDKTPESVKIDDLKNFKFIFREKGSGTRNVVEKALKKSGIEIKPFMEVGSSKAISKIVSGSDCLAFVSRLVAEDEIRYGKLKEIKIEGIKINRNFSFITQKNVRLPKVERDFLQFLLNNTAF
SIO_010081: PERMA_RS00820
subclass of: SO_0000673
so part of: PERMA_RS00820
location: 146270..147160
location: region:146270-147160:1
so has part: feature:146270-147160:1:exon

WP_012675837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:146270-147160:1:exon

PERMA_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00825
old locus tag: PERMA_0165
so part of: sequence
location: complement(147140..148117)
location: region:147140-148117:-1
so has part: feature:147140-148117:-1:exon
subclass of: SO_0000010

position:147140:-1
position: 147140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148117:-1
position: 148117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147140-148117:-1:exon

PERMA_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00825
old locus tag: PERMA_0165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015418813.1
GO function: GO:0016853 - isomerase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KpsF/GutQ family sugar-phosphate isomerase
translation: MKLKMKDKSPSQIGKKVLEEERNALQKTLSALDNNFDKAVELILNTKGKVVVTGMGKSGLVGKKIAATLASTGTPSFFLHPAEAIHGDLGMISKEDIVLAISNSGETPELLAIIPTIKRWGNKVISITNNKNSTLAKESDIHLYLNIEREACPLNLAPTSSSTATLALGDALAVALLEMRGFTAEDFARFHPGGSLGRKLMRVSEIMHRGEELPVVHPETELKETVIVMSEKGFGAALIINKDGDLTGIITDGDLRRFIKKGGSIDRSLTEEAMTVNPKYINKDILVVEALEIMERYNITVLPVVEDKKPVGLVHLHDILKSGVI
SIO_010081: PERMA_RS00825
subclass of: SO_0000673
so part of: PERMA_RS00825
location: complement(147140..148117)
location: region:147140-148117:-1
so has part: feature:147140-148117:-1:exon

WP_238527221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147140-148117:-1:exon

PERMA_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ricT
locus tag: PERMA_RS00830
old locus tag: PERMA_0167
so part of: sequence
location: complement(148095..149015)
location: region:148095-149015:-1
so has part: feature:148095-149015:-1:exon
subclass of: SO_0000010

position:148095:-1
position: 148095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149015:-1
position: 149015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148095-149015:-1:exon

PERMA_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ricT
locus tag: PERMA_RS00830
old locus tag: PERMA_0167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459127.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: regulatory iron-sulfur-containing complex subunit RicT
translation: MVKTIDKKSKEVRKRTVRIRFLDTHKFHEVDEVPETVQKGDFIVIETEKGEELVLVVGYAIPDKENPPPYKFLRKAGKKDIQIFDKHEKESEGALITCKKLAEKLGLKMNLLKAYIPLNRSKIMFYYVSEGRVDFRQLVRELAKRLKMRIEMRQVGVRDGVQMFGAVGVCGNECCCSLFMDRFDTVNVEMLEEQNLPPTPAKFTGVCGRLMCCLSFETENYEFRKNLPEIDSEVEIDGKVYRVKNFDFIREYVEFTDMEGSPLIVRFDQIENMNIKVLSVPQSACSDCTGCSMNNTEGEDEVKDEG
SIO_010081: PERMA_RS00830
subclass of: SO_0000673
so part of: PERMA_RS00830
location: complement(148095..149015)
location: region:148095-149015:-1
so has part: feature:148095-149015:-1:exon

WP_012676940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148095-149015:-1:exon

PERMA_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00835
old locus tag: PERMA_0168
so part of: sequence
location: complement(149025..149954)
location: region:149025-149954:-1
so has part: feature:149025-149954:-1:exon
subclass of: SO_0000010

position:149025:-1
position: 149025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149954:-1
position: 149954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149025-149954:-1:exon

PERMA_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00835
old locus tag: PERMA_0168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta'
translation: MKILGHEETKEIIRLYLDKKYSSYSLLFEGKDCIGKKLIALKTAKGFLCEKRYGFGCDSCESCRLVRNTISNIYDKTDLNPHPDIKIVSPEDGKEIKIGQIRDVISFLKLKTKEGKVVIIEKAERMNRESSNALLKTLEEPPENTLIILTTSNQNALLPTIVSRCQKIKFRPLSKEEILSILKLKGVDESKAKILASLSEGSMCLPMMILNNENLFKYAKDLYNLLAVKNLHPEGIINLAEILDRLETNEIFIIFDILEKIIYKKSLKGEVPLGLYENFLDEYSLFKKAVEKGVKKKLAVEGLYFNLKT
SIO_010081: PERMA_RS00835
subclass of: SO_0000673
so part of: PERMA_RS00835
location: complement(149025..149954)
location: region:149025-149954:-1
so has part: feature:149025-149954:-1:exon

WP_012675672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149025-149954:-1:exon

PERMA_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: tmk
locus tag: PERMA_RS00840
old locus tag: PERMA_0169
so part of: sequence
location: complement(149959..150582)
location: region:149959-150582:-1
so has part: feature:149959-150582:-1:exon
subclass of: SO_0000010

position:149959:-1
position: 149959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150582:-1
position: 150582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149959-150582:-1:exon

PERMA_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: tmk
locus tag: PERMA_RS00840
old locus tag: PERMA_0169
EC number: 2.7.4.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459125.1
GO function: GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTMP kinase
translation: MRGFFITFEGIEGAGKSTQSKMLYEYLIKNGKNAVLTREPGGTDLGKKIREILLNPSKEIFPPVAELMLYEADRNIHVHNIIKPYLNRGFYVISDRFTDSTLAYQGYARGIDIELVERLNDIASEGIKPDITFIIDIPVEEGMKRIHRYREKDRIEQEGVDFHKRLREGFLRIAQKERERVVLLDGRKDKEIIFNEILEILRKRDII
SIO_010081: PERMA_RS00840
subclass of: SO_0000673
so part of: PERMA_RS00840
location: complement(149959..150582)
location: region:149959-150582:-1
so has part: feature:149959-150582:-1:exon

WP_041530969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149959-150582:-1:exon

PERMA_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00845
old locus tag: PERMA_0171
so part of: sequence
location: 150673..150948
location: region:150673-150948:1
so has part: feature:150673-150948:1:exon
subclass of: SO_0000010

position:150673:1
position: 150673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150948:1
position: 150948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150673-150948:1:exon

PERMA_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00845
old locus tag: PERMA_0171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288745.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NifU family protein
translation: MSQEQGNKVNIDRAKVEEVLEQIRPMLRFDGGDVELVDIGEDGTVYVRLMGSCHGCAMSLVTLKGGIEMKLKEAIPEVKEVVAVNLEQPMF
SIO_010081: PERMA_RS00845
subclass of: SO_0000673
so part of: PERMA_RS00845
location: 150673..150948
location: region:150673-150948:1
so has part: feature:150673-150948:1:exon

WP_012676414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150673-150948:1:exon

PERMA_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00850
old locus tag: PERMA_0170
so part of: sequence
location: complement(150938..153673)
location: region:150938-153673:-1
so has part: feature:150938-153673:-1:exon
subclass of: SO_0000010

position:150938:-1
position: 150938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153673:-1
position: 153673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150938-153673:-1:exon

PERMA_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00850
old locus tag: PERMA_0170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459553.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-synthetase adenylyltransferase
translation: MGSLSKFETLKKDFLLSLPEDRYDLLKDLVDHSSCIGDFIFRHTDQLEYLFTELEKPLKGREKLVNEAMDLLDIPDDEEFIRSLTFFKMKHFSRIVAKDIKGKNELLDLTEEYSYLADACFEVSFERAYRKHKNRYGTPIDESTGEEAKGSVIALGKHGGLDLNYYSDVDVMYIYSNEGKTTKGITNREFFINMFKDVTRYLTKRNFEGITWIVDLDLRPEGKKGFIAYSLPAVEFYYWSHGRTWERHMLIKARHAAGDPDLSNEFMSIVQPFVYRKYSGEEIFEEILEMKKLIEAEAKKKIKGEYDVKRGEGGIREVEFTVQILQLLYGGKDPELRERRTMKALEKLVDRGYIPEEDGKILKDGYIFLRRLEHLIQIKNCVQTQSLDFKDIKYYASKLGFENEKDFLERLDQFRENIKRIFENITPETDIKLTPLQRFIITKQYEEEAEDYLESLGFKDPSWALSRFKEIFFSKMYVELTENSKEVLFSFLPEFEKELKEFPDREDFLLNFSKMMVEGGMLWVFVSALEQNENLVRFMLNIAKLSDYISDLMSKDRELLDWAFGIEDVPQEREGFEKELNVINKRLDLPDRLKKLKKIVEVLVSLKYLSQIGNKNAEKRLKEINISLSNLADYILEKLYDYFGGESFSIYALGKLGSREMNIGSDLDLIFVFKDERSKNRFIKIPSQIVKTLTSYSGEGLLYQLDLRLRPFGKRGELSPSLSFYKTYFEKEARSWERLAWTKARFITGDLETKERFEELIQNFLFSKPIDDKFIEDIFEMRFRLEGLVRETPEEIDIKLGKGGITDVEFLIQTFLIINRSRETNILNGVKRYLPNITDEYIFLREVEARLRMIKGVGMSKIYRNSPFLYRIAHSFNMEPHQLWERILNTKKIIRDIFLREIKLLRERFRT
SIO_010081: PERMA_RS00850
subclass of: SO_0000673
so part of: PERMA_RS00850
location: complement(150938..153673)
location: region:150938-153673:-1
so has part: feature:150938-153673:-1:exon

WP_012675316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150938-153673:-1:exon

PERMA_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00855
old locus tag: PERMA_0172
so part of: sequence
location: 153729..154790
location: region:153729-154790:1
so has part: feature:153729-154790:1:exon
subclass of: SO_0000010

position:153729:1
position: 153729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154790:1
position: 154790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153729-154790:1:exon

PERMA_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00855
old locus tag: PERMA_0172
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288754.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: trypsin-like peptidase domain-containing protein
translation: MHQFYILLSFISIFFFLSCEKPEKKEEKDPVAVIQERFAKIIQETAPSVVTILTHTKSGKTPIIFRFSEEPFPFDSETLGSGFVIKKDQKFLYIVTNSHVVEKSKTITVKFYDGYETTGKIVGQDKQTDIAVVKVKIDEKTKGIKPLKLGTTKNLKVGYLVISGGSPYNLGHTFTLGIISALNRNLGISPYENYIQTDAAINPGDSGGPLLDINGNVIGMNTAIIQSGQGLGFAIPIDTVKELSQQLIKYGKVKRGWLGVLVQEIDEKMKRKLNIDHGVLVIKVFKKSPAKKSGIKTGDIILSINGIRIRDLQDMRQVISRLKPEEKTSVEILRNRKRLIITVVIEEKLDKGN
SIO_010081: PERMA_RS00855
subclass of: SO_0000673
so part of: PERMA_RS00855
location: 153729..154790
location: region:153729-154790:1
so has part: feature:153729-154790:1:exon

WP_012675222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:153729-154790:1:exon

PERMA_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00860
old locus tag: PERMA_0173
so part of: sequence
location: 154862..155719
location: region:154862-155719:1
so has part: feature:154862-155719:1:exon
subclass of: SO_0000010

position:154862:1
position: 154862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155719:1
position: 155719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154862-155719:1:exon

PERMA_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00860
old locus tag: PERMA_0173
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoD/SigA
translation: MRKFKYEEGITYYLNSISKIPLLSPEEEKEIAKKAKEGDKEALEKLIKSNLRFVVNVAKNYTGYGIPFQELISAGNIGLIEAAKRFDPERGVRFISYAIWWIKQSILQTIQSQKDIIKIPQKTQNLSMKIDTAYLELKERLNREPKYSEIKEYLKEHENIDIDEETIENYLLIKRHSVSLDTPVDMDEGTFFIDLISKHSTKDIEENIVRESIEKEIEYILSHLSERERFIIVNRFGLNGEEPKTLREIGKELGISRERVRQIEIRALKKIRALATKKHLKDLLS
SIO_010081: PERMA_RS00860
subclass of: SO_0000673
so part of: PERMA_RS00860
location: 154862..155719
location: region:154862-155719:1
so has part: feature:154862-155719:1:exon

WP_012676374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:154862-155719:1:exon

PERMA_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00870
old locus tag: PERMA_0175
so part of: sequence
location: complement(155884..156354)
location: region:155884-156354:-1
so has part: feature:155884-156354:-1:exon
subclass of: SO_0000010

position:155884:-1
position: 155884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156354:-1
position: 156354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155884-156354:-1:exon

PERMA_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00870
old locus tag: PERMA_0175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008286449.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqaA family protein
translation: MFEGLREWAEAVVNDYGYLGIFLISFTESIIQPVPPDPFITGGTAFGLSPVYAALIAAVASVLGGMVGYALGKFLGEPVFKKFIGEKYYDKGEILFRKYGIWAVIIAAITPIPFKAICWLAGIFEMPFWGFVLAAFIGRLPRFLFMAFFGQWLGSL
SIO_010081: PERMA_RS00870
subclass of: SO_0000673
so part of: PERMA_RS00870
location: complement(155884..156354)
location: region:155884-156354:-1
so has part: feature:155884-156354:-1:exon

WP_015899027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155884-156354:-1:exon

PERMA_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: tyrS
locus tag: PERMA_RS00875
old locus tag: PERMA_0176
so part of: sequence
location: complement(156371..157603)
location: region:156371-157603:-1
so has part: feature:156371-157603:-1:exon
subclass of: SO_0000010

position:156371:-1
position: 156371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157603:-1
position: 157603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156371-157603:-1:exon

PERMA_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: tyrS
locus tag: PERMA_RS00875
old locus tag: PERMA_0176
EC number: 6.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012963597.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine--tRNA ligase
translation: MLKLSPEEQLKIIKKGVLEIINEEELLEKLKEERPLIVKAGFDPTAPDLHLGHTVLLQKLRTFQQLGHTVYFIIGDFTAMIGDPSGRDKTRPPLTKEQVLENAKTYKEQVFKVLDPEKTVVVFNSEWLGDMTAQDLIKLTARYTVARMLERDDFKKRFKENKPIAIHEFIYPLLQAYDSVAIKADVELGGSDQRFNLLIGRDIQKEYGIEKPQVAILLPLLVGTDGVRKMSKSYGNYIGITEPPEEMFGKLMSIPDDLMWDYWELLTDLSIEEIEKMKMDVEEGVLHPMEVKKQLAMYIVTRFHDEESAIKAREHFERVHSKREIPEEIPEPEIIVATEGKIPLYELVFKTGFAPSKSEARRLIKGGAVKIDGEKFTDPYFEVDLTKEFVLQVGKRKFARIKPENIKIER
SIO_010081: PERMA_RS00875
subclass of: SO_0000673
so part of: PERMA_RS00875
location: complement(156371..157603)
location: region:156371-157603:-1
so has part: feature:156371-157603:-1:exon

WP_012675736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156371-157603:-1:exon

PERMA_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00880
old locus tag: PERMA_0177
so part of: sequence
location: 157722..158888
location: region:157722-158888:1
so has part: feature:157722-158888:1:exon
subclass of: SO_0000010

position:157722:1
position: 157722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158888:1
position: 158888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157722-158888:1:exon

PERMA_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00880
old locus tag: PERMA_0177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674835.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate aminotransferase family protein
translation: MEKFIEEGKRYLIQNYARYPVSFVKGEGVYLYDTEGKRYIDMLAGIAVNTLGYNHPLLTEALCNQIKDVIHVSNLFYIQPQIDVAKILVENSCLDRVFFCNSGAEANETAIKLVRKYFYDKGKPEKFEIVTFTGGFHGRTIGSLTATAQPKYHEGFKPLLQGIRYAEFNNVESLKSAVNENTAAVMFEFIQGEGGINPIDRDFLSEIVKISREYDLLIVVDEVQTGIGRTGKLFAYQHYDICPDIVTLAKGLGGGVPIGAVLAKEEVAEVFTPGTHGSTFGGNYISTTAAKVVLNEVLKDGFLEDVEKKGEFLIEELRNIGLKPRGKGLMVGCPLPEDIKAGDIAKKALDEGLIIGTAGGNTLRFVPPLIIQKEQIQEAVNILKKVVV
SIO_010081: PERMA_RS00880
subclass of: SO_0000673
so part of: PERMA_RS00880
location: 157722..158888
location: region:157722-158888:1
so has part: feature:157722-158888:1:exon

WP_012675586.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157722-158888:1:exon

PERMA_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rnr
locus tag: PERMA_RS00885
old locus tag: PERMA_0178
so part of: sequence
location: 158942..161056
location: region:158942-161056:1
so has part: feature:158942-161056:1:exon
subclass of: SO_0000010

position:158942:1
position: 158942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161056:1
position: 161056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158942-161056:1:exon

PERMA_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rnr
locus tag: PERMA_RS00885
old locus tag: PERMA_0178
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459778.1
GO function: GO:0008997 - ribonuclease R activity [Evidence IEA]
GO process: GO:0006401 - RNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease R
translation: MEVTEKDVINFLKHRRKPTYFKMFLKKLGIPKSEKKKLRKLLKKLQKKKIIRYEKGKYLLTEWKEEGDLIEGRVEAHPSGYGFLIVGEDVEDLFIPPPQMRYLFDGDIVLAKAVKRRKKDEAKIVKIVQRAVKTVVGIYKKDRTGHYILLADTVIPHRIYISKKEAKKKKLEEGMYVVVEITEYPAPKVRGRGKVVEVLGKTKNTRTVAEIVARKYSLPLKHSEEAVKEAEKLSPVVRITKNRRDLTDQICFTIDPESARDHDDAVAIEKEGNLYRLFVHIADVSYYVKEGSAIDREAFERGNTYYLPEMALHMLPERLAAELCSLRPDEKKYAFTCEMLINRAGKVVDYDIYESVIISKAKLTYDEALRLIVGDPALEKKYPDLVKPLRYMEELAKILMKAKEKRGSIDFDMPESKILFTETGDPYDVVPYERHLAHRIIEEFMIIANETVARFMEEKGYPFIYRTHEEPDLDKVIKFVDLVAGLGYDVSYPEKITPKFIQKIIEKATGTPEENLIRFMALRTMKQAKYTVENIGHFGLASDCYTHFTSPIRRYADINVHRMLKKAIRKKFTKKDMQELPEKLKVIADQCSKMERVADDAERDALEILKLRILASHIGEEFEGVITGVVSFGLFVEIEKYLVEGLIHISTLPDDFRYDEENQRLIGKERIFRLGDKVKVIIERVDEDLKKLDLLLSDDSLKVS
SIO_010081: PERMA_RS00885
subclass of: SO_0000673
so part of: PERMA_RS00885
location: 158942..161056
location: region:158942-161056:1
so has part: feature:158942-161056:1:exon

WP_012676539.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158942-161056:1:exon

PERMA_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00890
old locus tag: PERMA_0179
so part of: sequence
location: 161186..161626
location: region:161186-161626:1
so has part: feature:161186-161626:1:exon
subclass of: SO_0000010

position:161186:1
position: 161186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161626:1
position: 161626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161186-161626:1:exon

PERMA_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00890
old locus tag: PERMA_0179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460277.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase F0 subunit B
translation: MHVGVIPDITLFVQLIIFLIFMFIMKKIYFDPYLESFDERERTVDSLLKQAEENNKKANEILEQVEAILAETKKEAQKILDQYHSETNEMVANILRKASEEAEKEIEEAKKDVERVVEIEKKTMDKVIQKIAEEIAEKLLLKEKAA
SIO_010081: PERMA_RS00890
subclass of: SO_0000673
so part of: PERMA_RS00890
location: 161186..161626
location: region:161186-161626:1
so has part: feature:161186-161626:1:exon

WP_012675425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161186-161626:1:exon

PERMA_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00895
old locus tag: PERMA_0180
so part of: sequence
location: 161623..162159
location: region:161623-162159:1
so has part: feature:161623-162159:1:exon
subclass of: SO_0000010

position:161623:1
position: 161623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162159:1
position: 162159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161623-162159:1:exon

PERMA_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00895
old locus tag: PERMA_0180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460276.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase F0 subunit B
translation: MRKALLLSLIAVSSAFAGGGAEHGGMMLVWKTINTIILLGALFYIVKRWGVQFFENRRNAIVSMVEEAKKAKEDSEKALKDAEAKLEEAKMKFTESLKIAEETAKKEREVAIKEANEIAERIKAQAKDAIQVEIKRGENELRKYAVKKALEISEKIIKEKVNPEVEKEIIKKTLKALS
SIO_010081: PERMA_RS00895
subclass of: SO_0000673
so part of: PERMA_RS00895
location: 161623..162159
location: region:161623-162159:1
so has part: feature:161623-162159:1:exon

WP_012675986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161623-162159:1:exon

PERMA_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: atpH
locus tag: PERMA_RS00900
old locus tag: PERMA_0181
so part of: sequence
location: 162172..162720
location: region:162172-162720:1
so has part: feature:162172-162720:1:exon
subclass of: SO_0000010

position:162172:1
position: 162172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162720:1
position: 162720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162172-162720:1:exon

PERMA_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: atpH
locus tag: PERMA_RS00900
old locus tag: PERMA_0181
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676386.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase F1 subunit delta
translation: MKIDKKSLKRIVKVLLNKVPKEEAALIKVSDDLTLIQEIYRKDKDFRNFILNPSAPYEDKKKIIDSLSEKAGLDPVVKEALEYIVKTNKGNLLKIIGDEFRFEVEKFFATVKGEIITAYPIDEETINSVKEVVEKKLGKKVEFDIKQDPSIIGGIIVKAGSYILDSSLKTYLQKLEQQLTAF
SIO_010081: PERMA_RS00900
subclass of: SO_0000673
so part of: PERMA_RS00900
location: 162172..162720
location: region:162172-162720:1
so has part: feature:162172-162720:1:exon

WP_012676386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162172-162720:1:exon

PERMA_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: atpA
locus tag: PERMA_RS00905
old locus tag: PERMA_0182
so part of: sequence
location: 162758..164272
location: region:162758-164272:1
so has part: feature:162758-164272:1:exon
subclass of: SO_0000010

position:162758:1
position: 162758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164272:1
position: 164272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162758-164272:1:exon

PERMA_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: atpA
locus tag: PERMA_RS00905
old locus tag: PERMA_0182
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460274.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit alpha
translation: MSAIRAEEILEGLKKQLEEFEAKANLEEVGMVLQVGDGVARVFGLEKAMYGEMVEFENGKLGVAFNLEEDNVGVILLGDETGIEEGTIVKRTGKILEVPVGMGLVGRVVDGTGKPIDGKGPIENIAYYSPVEKIAPGVVTRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRATGKTTVAIDTILNQKGEDVYCVYVAIGQKRAVVRQIVETLQKHGAMEYTTVVAATASDPATMQYIAPFVGCTIAEYFRDNGMHALIIYDDLTKHAYAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFHKGIRPAINVGLSVSRVGGAAQIKAMKQVAGTLRLELAQFRELEAFVQFASELDKATQAQIARGQRLVELLKQPPNKPVPVEKQVAIIYAGTKGYLDDVPVNAIQKFEQEFYTFLDTEKPEVLEMIRAEKKITDEIETKLKEAIEEFKKKVAF
SIO_010081: PERMA_RS00905
subclass of: SO_0000673
so part of: PERMA_RS00905
location: 162758..164272
location: region:162758-164272:1
so has part: feature:162758-164272:1:exon

WP_012676375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162758-164272:1:exon

PERMA_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00910
old locus tag: PERMA_0183
so part of: sequence
location: 164287..165162
location: region:164287-165162:1
so has part: feature:164287-165162:1:exon
subclass of: SO_0000010

position:164287:1
position: 164287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165162:1
position: 165162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164287-165162:1:exon

PERMA_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00910
old locus tag: PERMA_0183
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675291.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit gamma
translation: MAKLSPRDIKRKIQGIKNTQRITKAMKAVSAAKLNKAKAKLNATRPYSERLYDLINDLAMFVDRDIHPLLKIRDEHKVDIVVVTADRGLAGAFNSYVIKTTLGKVKELQEAGKDVNLILIGRKAVQFFKNKGFNIIAEYEDIYRDHMNLSFTSQVGGIIAERYENEKTDAVYLINNELITTATYETKVRKLFPIEPELDYTKLSEISRYNIEPSSEEVLEQLLKRYINFQLYRALVESSTAEHAARMIAMDNATRNAGEAIKRWTIIFNKARQEAITTELIDIINASNAIE
SIO_010081: PERMA_RS00910
subclass of: SO_0000673
so part of: PERMA_RS00910
location: 164287..165162
location: region:164287-165162:1
so has part: feature:164287-165162:1:exon

WP_012675291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164287-165162:1:exon

PERMA_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: atpD
locus tag: PERMA_RS00915
old locus tag: PERMA_0184
so part of: sequence
location: 165187..166620
location: region:165187-166620:1
so has part: feature:165187-166620:1:exon
subclass of: SO_0000010

position:165187:1
position: 165187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166620:1
position: 166620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165187-166620:1:exon

PERMA_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: atpD
locus tag: PERMA_RS00915
old locus tag: PERMA_0184
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008289216.1
GO component: GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit beta
translation: MADMKGKIVQVVGPVVDVEFETEELPEIRWALKTQRTAIDDKGNEFVEDLYLEVAQHLGEKRVRTIAYGPTDGLVRGQEVESVGGPLQIPVGKPVLGRIFNVVGQPIDDGGPVEAEEKWPIFRPAPSFEEQSTKVEIFETGIKVIDLLVPFIKGGKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVGVGERTREGNDLWMEMKESGVLPYTAMVYGQMNEPPGVRFRVAQTGLTMAEYFRDVEKQDVLIFIDNIFRFVQAGAEVSTLLGRLPSAVGYQPTLGTDVGEVQERITSTVNGSITSIQAVYVPADDITDPAPASVFAHLDATIVLQRRLAELGIYPAIDPLESTSKALAPEYVGEEHYFVAREVQRILQRYKELQEIIAILGMEELSEEDKALVYRARKLQRFLAQKFHVAEQFTGQPGDYVKREDTIRSFKEVVEGKWDHLPEQAFYMVADIEDAKRKAEEMEAKQA
SIO_010081: PERMA_RS00915
subclass of: SO_0000673
so part of: PERMA_RS00915
location: 165187..166620
location: region:165187-166620:1
so has part: feature:165187-166620:1:exon

WP_012676486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165187-166620:1:exon

PERMA_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00920
old locus tag: PERMA_0186
so part of: sequence
location: 166637..166969
location: region:166637-166969:1
so has part: feature:166637-166969:1:exon
subclass of: SO_0000010

position:166637:1
position: 166637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166969:1
position: 166969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166637-166969:1:exon

PERMA_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00920
old locus tag: PERMA_0186
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRLFIVSFLVTVQFFILSCSKKDSELSKEDKCKLVYKVYSDCYYGSYFIEDPSNCTGLSNGFYKVLKKEGYGTDILEKAKSVCYTGCNQSVNKRKIDPYKEFKKKHCFF
SIO_010081: PERMA_RS00920
subclass of: SO_0000673
so part of: PERMA_RS00920
location: 166637..166969
location: region:166637-166969:1
so has part: feature:166637-166969:1:exon

WP_012676852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166637-166969:1:exon

PERMA_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: tsaD
locus tag: PERMA_RS00925
old locus tag: PERMA_0185
so part of: sequence
location: complement(166944..167978)
location: region:166944-167978:-1
so has part: feature:166944-167978:-1:exon
subclass of: SO_0000010

position:166944:-1
position: 166944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167978:-1
position: 167978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166944-167978:-1:exon

PERMA_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: tsaD
locus tag: PERMA_RS00925
old locus tag: PERMA_0185
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676836.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MKILGIETSCDDTAVSVYDSEEGLLSNVVSSQIKMHEEWGGVYPDLAAREHTKNIIPVLDRALKEASVNIKDIDGIAVTVAPGLIVSLVIGISVAKTLSWIYRKPLIPVHHIEAHIFASFITEKIDYPFIALVVSGGHTELYLIKGFEDYRYLGGTLDDAVGEAYDKVARMLGLGYPGGPVIDRLSKEGEDTVKLPRPLINDRGKNRFNFSFSGLKTAVLREIQKGVYRKEDIARSFQEAATDVLLAKTIDAMKEFNIKNVVIAGGVSANSRLREKFKEAEENHGIKAYFPPLYLCTDNGAMVAFTGYKRFKESGTTVDYSFEGKARLRMDKFVEIIRKSSVSS
SIO_010081: PERMA_RS00925
subclass of: SO_0000673
so part of: PERMA_RS00925
location: complement(166944..167978)
location: region:166944-167978:-1
so has part: feature:166944-167978:-1:exon

WP_012676836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166944-167978:-1:exon

PERMA_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00930
old locus tag: PERMA_0187
so part of: sequence
location: complement(167975..169207)
location: region:167975-169207:-1
so has part: feature:167975-169207:-1:exon
subclass of: SO_0000010

position:167975:-1
position: 167975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169207:-1
position: 169207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167975-169207:-1:exon

PERMA_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00930
old locus tag: PERMA_0187
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S41 family peptidase
translation: MKSRLSLFVGVILVFIAGVNFGLSAKTDTKDIEKDLKLIGLYTEVFKIVKDYYVEPVDSKKLIYGSLRGMLHSLDPYSTFFTPDEFKDFTTETHGEFGGLGIEITMENHKLIIVAPIEDTPAWKAGLKAGDIIIEIDGEPTDKMTLMQAVKKMRGKPGTKITLTIWRKGVEKPFKVTITRAIIKIKSVKTKELEDGKIGYIRLTQFQENSAEEFEKALKKFKDKDGIIIDLRNNPGGLLSTAVEIADMLLDKGKLIVYTKGRDPRANEEYYSTSSPIIPDDIPIVVIVNKGSASASEILTGALRDNNRALAVGDQTFGKASVQTLIPLPDGAGLKITTAHYYTPSGKLIMNKGITPDIVVHMTEEEEMERIKAEREAKIKGEEKVKIVDPQLDTAINAIKILNFARKEAK
SIO_010081: PERMA_RS00930
subclass of: SO_0000673
so part of: PERMA_RS00930
location: complement(167975..169207)
location: region:167975-169207:-1
so has part: feature:167975-169207:-1:exon

WP_012675757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167975-169207:-1:exon

PERMA_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00935
old locus tag: PERMA_0188
so part of: sequence
location: complement(169263..171314)
location: region:169263-171314:-1
so has part: feature:169263-171314:-1:exon
subclass of: SO_0000010

position:169263:-1
position: 169263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171314:-1
position: 171314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169263-171314:-1:exon

PERMA_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00935
old locus tag: PERMA_0188
EC number: 2.7.7.65
EC number: 3.1.4.52
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional diguanylate cyclase/phosphodiesterase
translation: MSRKNLNFENLRKELALKSGTVIENLLKYNSLIKGLRREIKSLSEPQEFKEQSCDLILEEFEKNLNYNIQLVKDGSIRAIDLILLLEKEVVDKKLLQEETKILKEIVLSRENIMDWKGYAKEILRKLRAIYPYDLFFFMFEEDNTIKFYIFYSYIPPDDLKEEIKVYLTENVVKNFKKNPYRNLDFEEIYISNKSRRKEIKKIHIETHQFLPDSPGIGGTLGLIVLPEERLSRKDINILNSILSIMTLVTGSSRALSKAITELEYFAGHDPLTDLYNRRIFEDLLKYEVSRAKRKNYKFSLILIDLDNFKYINDTYGHHIGDIVLKSVADILEASIRDGDLVARIGGDEFVILLSETELEKALIVAERIRKNLENNKLCIFEGAVISVSASLGVVEFPTHGTTKEELMMVVDNALYRAKDLGKNKVYVPTHEEIEKTIKEKRKEFSILQEAIDKELFVPYFQPIYDLKNDNVHAYEVLARLKDEKGEVISAYRFISLAEKLGKIKDIDKTIIKKALTEKKENDLKEKLFLNLSAKDISDDSFWQYIFSVVNDLNIDPEEIVFELTEREAVKETAEVQALIVKLKDKGFGFAIDDFGSGYSSFYYLKYFPIDYVKIDGEFIRELKPSDPKSIAFVESMDLLCKRLNIKTVAESIENEDILKILKNIGIDYGQGFHLGYPESKFL
SIO_010081: PERMA_RS00935
subclass of: SO_0000673
so part of: PERMA_RS00935
location: complement(169263..171314)
location: region:169263-171314:-1
so has part: feature:169263-171314:-1:exon

WP_012676649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169263-171314:-1:exon

PERMA_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00940
old locus tag: PERMA_0189
so part of: sequence
location: complement(171311..172048)
location: region:171311-172048:-1
so has part: feature:171311-172048:-1:exon
subclass of: SO_0000010

position:171311:-1
position: 171311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172048:-1
position: 172048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171311-172048:-1:exon

PERMA_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00940
old locus tag: PERMA_0189
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015419141.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MBL fold metallo-hydrolase
translation: MDKILFDSKNHKFILLGFAESKEELGIPSNQYLIVHNNKGIILDPGGFGLFPILLSRILKYTKLNNIKAIILSHQDPDICGGLNIWLEMTNAKAYISKLWLRFIPHYDIKRTDQIYGIPDEGMDLEVDERLKLKIIPAHFLHSPGHVNVYDPVSKILFTGDIGAGLLPCSENKLFVEDFEEYVKCIDSFHKRYMASNEALRKWVKRVEKLDVDIIAPQHGYLFKGENVDKLLKYLYDLKCGVDLF
SIO_010081: PERMA_RS00940
subclass of: SO_0000673
so part of: PERMA_RS00940
location: complement(171311..172048)
location: region:171311-172048:-1
so has part: feature:171311-172048:-1:exon

WP_012675302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171311-172048:-1:exon

PERMA_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: aroC
locus tag: PERMA_RS00945
old locus tag: PERMA_0190
so part of: sequence
location: 172155..173330
location: region:172155-173330:1
so has part: feature:172155-173330:1:exon
subclass of: SO_0000010

position:172155:1
position: 172155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173330:1
position: 173330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172155-173330:1:exon

PERMA_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: aroC
locus tag: PERMA_RS00945
old locus tag: PERMA_0190
EC number: 4.2.3.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673988.1
GO function: GO:0004107 - chorismate synthase activity [Evidence IEA]
GO process: GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate synthase
translation: MGTLRFLNAGESHGPALTAIIEGLPSNLRISSEFINRELSRRQSGYGRGGRMKIEKDRVEILSGVRFGYTLGSPVTLMVRNKDWENWTDIMAVEGQPTEKKEITNPRPGHADLPGGIKYGFHDLRNVLERASARETTTRVAVGAVCKQLLEDIGIRIGSYVVSIGEISLRDRIKDIPLEERFEKAESSEVRTPLPELDQEFKELIDRAREEGESLGGVFEVFAVGVPVGLGSHVHWDRRLDGRIAQAMMSIQAMKGVEIGEGFSLAEMYGSQAHDEIFWDKERGFYHRTNRAGGIEGGITNGEPILVRVGMKPIPTLMRRKSLRSVNIKTKQPFDAAKERSDVTAVPAAAVVGEAMLAIVLAQAVLEKFGNDNWIDIKRRIEEYRAYTREF
SIO_010081: PERMA_RS00945
subclass of: SO_0000673
so part of: PERMA_RS00945
location: 172155..173330
location: region:172155-173330:1
so has part: feature:172155-173330:1:exon

WP_015898987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172155-173330:1:exon

PERMA_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: atpB
locus tag: PERMA_RS00950
old locus tag: PERMA_0191
so part of: sequence
location: 173408..174043
location: region:173408-174043:1
so has part: feature:173408-174043:1:exon
subclass of: SO_0000010

position:173408:1
position: 173408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174043:1
position: 174043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173408-174043:1:exon

PERMA_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: atpB
locus tag: PERMA_RS00950
old locus tag: PERMA_0191
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012964004.1
GO component: GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO function: GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO process: GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: F0F1 ATP synthase subunit A
translation: MEGLYINHVLFAVVALVVVPVIFSTFAKKPSLVPTPLQNLFEMYIEFVDNMIKENMGEKGRKYFPLVAGIGLFVFFGNLMGMIPGLESYTANINTTLALALLVFVIYNVEGFRKHGIGYLKHFMGPIPVAAPIFFIIEIISHISRPITLALRLFANMTGGELITIVLIMLVPLLIPLPIMVVHLIAVFLQTYVFMILTTVYIAGAITEEAH
SIO_010081: PERMA_RS00950
subclass of: SO_0000673
so part of: PERMA_RS00950
location: 173408..174043
location: region:173408-174043:1
so has part: feature:173408-174043:1:exon

WP_012675266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173408-174043:1:exon

PERMA_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00955
old locus tag: PERMA_0192
so part of: sequence
location: 174055..174453
location: region:174055-174453:1
so has part: feature:174055-174453:1:exon
subclass of: SO_0000010

position:174055:1
position: 174055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174453:1
position: 174453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174055-174453:1:exon

PERMA_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00955
old locus tag: PERMA_0192
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MVNVNKVLVCVDLTPVSLKALEWAKDIARRYGSELVVYHEMEDVYTMLKVSSSFGIPSAPDLKENAEKNVKDRLKPLLKDFEGSYRLVIDAKGKVVDRLPEIVEDEKPDLTVITHDYERDIPRLNSQILVIK
SIO_010081: PERMA_RS00955
subclass of: SO_0000673
so part of: PERMA_RS00955
location: 174055..174453
location: region:174055-174453:1
so has part: feature:174055-174453:1:exon

WP_012675815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174055-174453:1:exon

PERMA_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS00960
old locus tag: PERMA_0193
so part of: sequence
location: 174477..174833
location: region:174477-174833:1
so has part: feature:174477-174833:1:exon
subclass of: SO_0000010

position:174477:1
position: 174477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174833:1
position: 174833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174477-174833:1:exon

PERMA_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS00960
old locus tag: PERMA_0193
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459663.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP synthase F0 subunit C
translation: MKKYSTAFIMLMMVAGAVSAAFAGEGATADAMARAIFYGGVAIGAGVAIGAAAGGGAAGLGNAIRGVLEGMARNPNMGGKLLTTMFIGMALIETFVLYGLLIAIIFLFTGIFDGKAGF
SIO_010081: PERMA_RS00960
subclass of: SO_0000673
so part of: PERMA_RS00960
location: 174477..174833
location: region:174477-174833:1
so has part: feature:174477-174833:1:exon

WP_012676914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174477-174833:1:exon

PERMA_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpmH
locus tag: PERMA_RS00965
old locus tag: PERMA_0194
so part of: sequence
location: 174931..175074
location: region:174931-175074:1
so has part: feature:174931-175074:1:exon
subclass of: SO_0000010

position:174931:1
position: 174931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175074:1
position: 175074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174931-175074:1:exon

PERMA_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpmH
locus tag: PERMA_RS00965
old locus tag: PERMA_0194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008287112.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L34
translation: MPEKVKDHLSNKKRKRTSGFLARKRTKSGRKILARRRRKGRKRIAIS
SIO_010081: PERMA_RS00965
subclass of: SO_0000673
so part of: PERMA_RS00965
location: 174931..175074
location: region:174931-175074:1
so has part: feature:174931-175074:1:exon

WP_012676356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174931-175074:1:exon

PERMA_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rnpA
locus tag: PERMA_RS00970
so part of: sequence
location: 175090..175443
location: region:175090-175443:1
so has part: feature:175090-175443:1:exon
subclass of: SO_0000010

position:175090:1
position: 175090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175443:1
position: 175443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175090-175443:1:exon

PERMA_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rnpA
locus tag: PERMA_RS00970
EC number: 3.1.26.5
inference: COORDINATES: protein motif:HMM:TIGR00188.1
GO function: GO:0004526 - ribonuclease P activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease P protein component
translation: MITLKDREIKSILSKGRSLHTENFIVIYRNNDLGYPRFAFILSRKFSKKAVVRNRAKRIIKEALRAYYGSLKNLSYDIIFIAKKNIIGKKTQDLYRDMEKLISILREGNGQISDKTY
SIO_010081: PERMA_RS00970
subclass of: SO_0000673
so part of: PERMA_RS00970
location: 175090..175443
location: region:175090-175443:1
so has part: feature:175090-175443:1:exon

WP_049756057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175090-175443:1:exon

PERMA_RS00975
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: yidD
locus tag: PERMA_RS00975
old locus tag: PERMA_0195
so part of: sequence
location: 175415..175621
location: region:175415-175621:1
so has part: feature:175415-175621:1:exon
subclass of: SO_0000010

position:175415:1
position: 175415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175621:1
position: 175621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175415-175621:1:exon

PERMA_RS00975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: yidD
locus tag: PERMA_RS00975
old locus tag: PERMA_0195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675521.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertion efficiency factor YidD
translation: MDRFLIKLIKIYKKFVSPALPNSCRYYPTCSSYAIQSIEKYGALKGSLKAVWRILRCNPFSKGGVDYP
SIO_010081: PERMA_RS00975
subclass of: SO_0000673
so part of: PERMA_RS00975
location: 175415..175621
location: region:175415-175621:1
so has part: feature:175415-175621:1:exon

WP_012675521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175415-175621:1:exon

PERMA_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: yidC
locus tag: PERMA_RS00980
old locus tag: PERMA_0196
so part of: sequence
location: 175642..177255
location: region:175642-177255:1
so has part: feature:175642-177255:1:exon
subclass of: SO_0000010

position:175642:1
position: 175642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177255:1
position: 177255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175642-177255:1:exon

PERMA_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: yidC
locus tag: PERMA_RS00980
old locus tag: PERMA_0196
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459667.1
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0051205 - protein insertion into membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane protein insertase YidC
translation: MNNNDQEMQKRMFIFFIAVAVLLIAYSIISSYLYPTEPSPEKNQKTQEVVEVKEEIKEQRKVPEPEERITYKQTGDYDLLLDKRRINADNLKDTVRINTDFGYIEISKIGARIVSIYVEKFKTDMISDFSKTNRLFPTEIITTSPELTALINFSPYSFRQEGDRLIFELKQGDISVRKIFEVNKDSTLSLKIDTEGLEKYGLSVINGISLKAESRAFGHSGAIIKTDKELIKLDADIDKKQTIRGHILWAGEENKYFLQMLAVKGGFSATHVVPIAEEKTVVFSEIPTSVEGFFFGGPKLYSLLGDITEKYKKEWNIDLSLRESIDFGFFGILGKPLFLIMHFIYDYIHNWGLTIIILTVLLRIVLFPLNHKSLKAMKKMADLAPEIKKLQKKYQKDPQKLQEEMMKLYAEHGTNPMSGCLPIVAQIPIFIALYNVLMVTVELKMVPFLWVQDLADKDPYYILPILMGVSMIAQQWITPSSDKNQKIIMYIMAFVFTFLFMNFPAGLVLYWLTNNILGIGQSFIVNKQMGLYKPKNK
SIO_010081: PERMA_RS00980
subclass of: SO_0000673
so part of: PERMA_RS00980
location: 175642..177255
location: region:175642-177255:1
so has part: feature:175642-177255:1:exon

WP_012675216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175642-177255:1:exon

PERMA_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: mnmE
locus tag: PERMA_RS00985
old locus tag: PERMA_0197
so part of: sequence
location: 177252..178610
location: region:177252-178610:1
so has part: feature:177252-178610:1:exon
subclass of: SO_0000010

position:177252:1
position: 177252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178610:1
position: 178610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177252-178610:1:exon

PERMA_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: mnmE
locus tag: PERMA_RS00985
old locus tag: PERMA_0197
EC number: 3.6.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675012.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
translation: MIKDTIVANATPLIPSAVSIIRISGDRALEIGRKLFRLPESIRERRVYFGKITDSKGSVIDEGLFIFFKGPRSFTGEDVVEIYPHGSVPVVKKIIEEAVNLGARFAQPGEFTKRAFINGKIDLTQAEAIADLIEARSEKASRVAVNILEGKLSEKVKELRNSLLYLVSLIEAEINFPEDVEEIDPDQIKKGLEHVIKGIDDLLRTYRKGEIIREGIKLAIVGRPNVGKSSLFNALVGYERAIVSEYRGTTRDFIEETVSIKGIPVKLLDTAGLRETEDKIELIGIKKAKEKIEEADVVIFVFDLSEGLTDEDLRIYEQIKYKDPIVVGNKSDLVNEKELDIFRKKYYFKNVLFVSTKLQKNLDHLEEEIFHKLGIIEDSDSEIYINLRHYKALEKAKNILKKTVQNIDELIDFKEILMLEISEAEKYLEEITGEITTEDVLENIFSRFCIGK
SIO_010081: PERMA_RS00985
subclass of: SO_0000673
so part of: PERMA_RS00985
location: 177252..178610
location: region:177252-178610:1
so has part: feature:177252-178610:1:exon

WP_012676314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177252-178610:1:exon

PERMA_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rho
locus tag: PERMA_RS00990
old locus tag: PERMA_0198
so part of: sequence
location: 178662..179915
location: region:178662-179915:1
so has part: feature:178662-179915:1:exon
subclass of: SO_0000010

position:178662:1
position: 178662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179915:1
position: 179915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178662-179915:1:exon

PERMA_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rho
locus tag: PERMA_RS00990
old locus tag: PERMA_0198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288271.1
GO function: GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor Rho
translation: MTLEELKRMTLQELQKLGKEIGLQRTTGLKKSELIAKILEKKAKDEGLNFIKGVLEVLPEGYGFIRSIENNYAPHSTDIYVSPSQIKKFGLRTGDYIIGIARLPKDNEKYRALIKIEAVNTVEPENIKRRPIFDRLVPFHPTERFNLEYDPSDLSTRVVSLISPIGKGQRGLIVAPPKAGKTVLIQRLAKALIKNHPEVHLIILLIDERPEEVTEMRRIVGEGAEVVASTFDEPPERHMHVAELIVERAKRLVENGQDVVILLDSITRLSRASNAITPPTGRVLSGGLEATALQRPKKFFGAARNIEDGGSLTILATALVETGSKMDDVIFEEFKGTGNMELYLDRRLMERRVFPAINIPKSGTRKEELLLEDWELQRVWILRKFLSTMDEVEAMEFLLDKLAKFKSNEEFLKSMNA
SIO_010081: PERMA_RS00990
subclass of: SO_0000673
so part of: PERMA_RS00990
location: 178662..179915
location: region:178662-179915:1
so has part: feature:178662-179915:1:exon

WP_202944144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:178662-179915:1:exon

PERMA_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpmE
locus tag: PERMA_RS00995
old locus tag: PERMA_0199
so part of: sequence
location: 179991..180188
location: region:179991-180188:1
so has part: feature:179991-180188:1:exon
subclass of: SO_0000010

position:179991:1
position: 179991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180188:1
position: 180188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179991-180188:1:exon

PERMA_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpmE
locus tag: PERMA_RS00995
old locus tag: PERMA_0199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288270.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MKKGIHPELKVTHFVCGCGNEFDLLSTKGGVVHLEVCNQCHPFYTGKLKIKPQFLEIKGVTAESK
SIO_010081: PERMA_RS00995
subclass of: SO_0000673
so part of: PERMA_RS00995
location: 179991..180188
location: region:179991-180188:1
so has part: feature:179991-180188:1:exon

WP_015898981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179991-180188:1:exon

PERMA_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: prfA
locus tag: PERMA_RS01000
old locus tag: PERMA_0200
so part of: sequence
location: 180188..181273
location: region:180188-181273:1
so has part: feature:180188-181273:1:exon
subclass of: SO_0000010

position:181273:1
position: 181273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180188-181273:1:exon

PERMA_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: prfA
locus tag: PERMA_RS01000
old locus tag: PERMA_0200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676428.1
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 1
translation: MLNKYLLQKLENIDEKLKKLEAALSDPEVLKDQKKLQQVAKEHKETEKLSKLYKEYKKVLKDIEETKSLLNNPDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPNDEKNVILEIRQGAGGEEAALFAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALIKGQGAYSRLKFESGVHRVQRVPETESSGRIHTSTATVAVLPEAEEVDIEIKPEELKIETMRASGAGGQHVNTTDSAVRITHIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRLEREKIEKERRMQVGTGDRSEKIRTYNFPQNRVTDHRINYTSHRLHDILDGDLDEIIDQLIAKEQEQKLLAISEE
SIO_010081: PERMA_RS01000
subclass of: SO_0000673
so part of: PERMA_RS01000
location: 180188..181273
location: region:180188-181273:1
so has part: feature:180188-181273:1:exon

WP_012676428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180188-181273:1:exon

PERMA_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01005
old locus tag: PERMA_0201
so part of: sequence
location: 181280..181353
location: region:181280-181353:1
so has part: feature:181280-181353:1:exon
subclass of: SO_0000663

position:181280:1
position: 181280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181353:1
position: 181353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181280-181353:1:exon

PERMA_RS01005
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 123214
locus tag: PERMA_RS01005
old locus tag: PERMA_0201
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:181314..181316,aa:Arg,seq:acg)
SIO_010081: PERMA_RS01005
subclass of: SO_0000673
so part of: PERMA_RS01005
location: 181280..181353
location: region:181280-181353:1
so has part: feature:181280-181353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181280-181353:1:exon

PERMA_RS01010
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01010
old locus tag: PERMA_0202
so part of: sequence
location: 181667..181867
location: region:181667-181867:1
so has part: feature:181667-181867:1:exon
subclass of: SO_0000010

position:181667:1
position: 181667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181867:1
position: 181867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181667-181867:1:exon

PERMA_RS01010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01010
old locus tag: PERMA_0202
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288082.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIKKAVEETGKHFLNVAVALIIFAILQPIIKGEFNLKTGIIFVTAYIVILLIGNLLIAFGGKDDG
SIO_010081: PERMA_RS01010
subclass of: SO_0000673
so part of: PERMA_RS01010
location: 181667..181867
location: region:181667-181867:1
so has part: feature:181667-181867:1:exon

WP_012675287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181667-181867:1:exon

PERMA_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01015
old locus tag: PERMA_0206
so part of: sequence
location: 182745..182817
location: region:182745-182817:1
so has part: feature:182745-182817:1:exon
subclass of: SO_0000663

position:182745:1
position: 182745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182817:1
position: 182817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182745-182817:1:exon

PERMA_RS01015
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 123214
locus tag: PERMA_RS01015
old locus tag: PERMA_0206
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:182778..182780,aa:Ala,seq:ggc)
SIO_010081: PERMA_RS01015
subclass of: SO_0000673
so part of: PERMA_RS01015
location: 182745..182817
location: region:182745-182817:1
so has part: feature:182745-182817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182745-182817:1:exon

PERMA_RS01020
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01020
old locus tag: PERMA_0207
so part of: sequence
location: 182923..184614
location: region:182923-184614:1
so has part: feature:182923-184614:1:exon
subclass of: SO_0000010

position:182923:1
position: 182923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184614:1
position: 184614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182923-184614:1:exon

PERMA_RS01020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01020
old locus tag: PERMA_0207
EC number: 6.1.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675772.1
GO function: GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline--tRNA ligase
translation: MRASQYFIPTLKEAPAEAEVPSHIYLIRAGFIRQLAAGLYEYLPLGFRVLKKIEGIIRKYMDDAGALEVLLPILAPAELWQETGRWDVYGKELFRVEDRKGRFFALGPTHEETITDLVRKNIRSYKDLPKNFYQIQTKFRDEARPRYGLIRGREFIMKDAYSFDISEEMAVKSYEIMKEAYKKIFDELGLDYLMVEADVGAIGGKYSHEFVVKVPNGEAHIVFCDNCGYAANVEAAKYEFELDKLPPEDEKPLEKVHTPGVSSVEDVSRFLDINQKKIVKTLVYILDDGTAVAVLIRGDRELNETKLINYFKALDCHLASSEELKDLGIVEGFVGPMGLDIPVYADISVKDLHNFVVGANEEDYHYINVNIPRDFKPVDFVDFSTAREGDPCPVCKKPLNETTGLEVGHIFLLGTKYSEALKAYFVDKDGREKPIVMGCYGIGVSRLMAAAVEQSHDENGIIWPENIAPFKLHILALNIKDDQIKTVAEDIYTKAKEKGIEVLFDDRDISPGAKFKDADLIGIPYRIVVGRGVKNGKVEIQTRKDGKKEEIDINEIDNFLDRL
SIO_010081: PERMA_RS01020
subclass of: SO_0000673
so part of: PERMA_RS01020
location: 182923..184614
location: region:182923-184614:1
so has part: feature:182923-184614:1:exon

WP_012675772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182923-184614:1:exon

PERMA_RS01025
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01025
old locus tag: PERMA_0208
so part of: sequence
location: 184616..185473
location: region:184616-185473:1
so has part: feature:184616-185473:1:exon
subclass of: SO_0000010

position:184616:1
position: 184616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185473:1
position: 185473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184616-185473:1:exon

PERMA_RS01025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01025
old locus tag: PERMA_0208
inference: COORDINATES: protein motif:HMM:NF013736.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GAF domain-containing protein
translation: MSYEDFIYNLTKTILQDFDIKTLFINVTDQIRKFIGAERSSLFFYDREKNLLRSVVISVDQNVDKIEIPVDKESIAGYTALEKRILNIKDIHDKKELSSIDPDLKYHNPWLSIKGVETRSMLSVPVIKDGEVLGVFQAINKDPYFTEKDEEILGKITPLIAIALDNVIKYSKMRIAQNIEKVILENISEAVVLLDNENRIITFNSQFGEMTGYRFSRNEAKNKKIEEILPIIKAHLDKIDFVRKYMIPEEITLDLIRIRMVPIIWECVLEGRFEYVGLIFHFPRG
SIO_010081: PERMA_RS01025
subclass of: SO_0000673
so part of: PERMA_RS01025
location: 184616..185473
location: region:184616-185473:1
so has part: feature:184616-185473:1:exon

WP_012675475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184616-185473:1:exon

PERMA_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01030
old locus tag: PERMA_0209
so part of: sequence
location: 185476..187203
location: region:185476-187203:1
so has part: feature:185476-187203:1:exon
subclass of: SO_0000010

position:185476:1
position: 185476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187203:1
position: 187203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185476-187203:1:exon

PERMA_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01030
old locus tag: PERMA_0209
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460355.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GspE/PulE family protein
translation: MSITIKRKIPDKSFIDLIVERLGLQLEDIKKYQSIAKKENKNLLQVLIEHGYSEEDIAKIKAEYFGYKYDRLTNYVPPEEITEIFSKKFLMERYVLPLKFDQNVLILAMVEPTDVITINEVIEILKQHGYDIKEVNIIITTKKQILEKIELLYEEKRKLEEILKILQVEEKEEFKFEHEEDITEKSSPIIMLAHRIIEDAYKKNASDIHIQPTEANTRIRMRIDGDLVDYLNLPKFAHEPLITRYKIMANMKIDEKRVPQDARINFARFNPAIDIDLRVSTVPTVYGEDLVMRLLDKSSVILDLDKLGFSENHLKLYRETIRKPYGIILHVGPTGSGKTTTLYSALKEIDTPEKKIITVEDPVEYTLGGSIVQTNINPAAGYTFAKAIKSFLRHDPDVMLVGEIRDIETAKIAVEASLTGHLVFSTLHTNDAVSTITRLEEMGIESYLLADSLLLICAQRLVKKICNSCKTAYIPSKKEEIVIKNAGFEINDDLRLYKGSGCKVCNFTGYKGRTGIHELLKVDSDIKNMLIERESTEKIKAVALEKGMKTLRQDAVEKALRGITTIDEVIRVTLE
SIO_010081: PERMA_RS01030
subclass of: SO_0000673
so part of: PERMA_RS01030
location: 185476..187203
location: region:185476-187203:1
so has part: feature:185476-187203:1:exon

WP_012676835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185476-187203:1:exon

PERMA_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01035
old locus tag: PERMA_0210
so part of: sequence
location: complement(187206..188090)
location: region:187206-188090:-1
so has part: feature:187206-188090:-1:exon
subclass of: SO_0000010

position:187206:-1
position: 187206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188090:-1
position: 188090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187206-188090:-1:exon

PERMA_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01035
old locus tag: PERMA_0210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008287103.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MVSEFIDKVICGDTLETLKKIPDNSIDLGITSPPYNKREDKKGWLVDKITYKGATDNLPEEVYQETQIKVLNELYRIIKPGGSFFYNHKIRWEKGIMFHPMDWLRKTKWIIRQEIIWDRMIAANLRGWRFWQVEERIYWLYKPIGNNKIGKELKSRHALLTSIWRLLPENNNPHPAPFPIALPVRIIYSIFDEERGKLVIDPYCGSGTTLVAAKILGHHYLGIDISQEYTDYALKRLENYQFEIPKAQEEISKHVVKKTFKERKEKGEFVGKYRKKTQQKNPSLFDILEKVEDK
SIO_010081: PERMA_RS01035
subclass of: SO_0000673
so part of: PERMA_RS01035
location: complement(187206..188090)
location: region:187206-188090:-1
so has part: feature:187206-188090:-1:exon

WP_012675331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187206-188090:-1:exon

PERMA_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01040
old locus tag: PERMA_0211
so part of: sequence
location: complement(188083..188742)
location: region:188083-188742:-1
so has part: feature:188083-188742:-1:exon
subclass of: SO_0000010

position:188083:-1
position: 188083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188742:-1
position: 188742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188083-188742:-1:exon

PERMA_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01040
old locus tag: PERMA_0211
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRELAEIIRIYATKTHKELNSYLLDCSKNNLIAILTDLLTIYMNDSNSSTLREFLTVTLAGYQHTKGKIGYNGYKLSAYGKPIRCEAKPKNIKSSGRGKLNGGGNFTDYTHERLERDLNENINMLVSGFIDGKLIYIIEFPFRCEKFVKKLEDQLNKRFPDGDIPGQYLRSASFTYEDYINCKNLKLVFCLPKKELRKYENYIVKKFYKFLWENAQDG
SIO_010081: PERMA_RS01040
subclass of: SO_0000673
so part of: PERMA_RS01040
location: complement(188083..188742)
location: region:188083-188742:-1
so has part: feature:188083-188742:-1:exon

WP_012676605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188083-188742:-1:exon

PERMA_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ychF
locus tag: PERMA_RS01045
old locus tag: PERMA_0212
so part of: sequence
location: complement(188787..189899)
location: region:188787-189899:-1
so has part: feature:188787-189899:-1:exon
subclass of: SO_0000010

position:188787:-1
position: 188787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189899:-1
position: 189899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188787-189899:-1:exon

PERMA_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ychF
locus tag: PERMA_RS01045
old locus tag: PERMA_0212
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redox-regulated ATPase YchF
translation: MKLNVGIVGLPNVGKSTIFNALTETAKAGVANYPFCTIDPNVGIVDLPDARLEKLAQIERSKRIVPATIEFVDIAGLVKGASKGEGLGNQFLSNIRNVSAIAHVVRCFEDSDVVHVEGSVNPVRDAEIIETELILADLQTVEKRLDKVIKPAKTGNKEAKFEVQVLEKAKKILEDLKPLRSFTDQFEEEEIDYMRKTIFPLTLKPVMYVANIDEEYLPEGEDNEYVKAIKEKAEKENAPVVVLCGKVEQELIEIPKEERGELLEAYGLSEPGLNKMIRTGFRLLDLITYFTAGEKEARAWTIKRGTKAPQAAGEIHSDFERGFIAAEVINYEDLIKAGSLQKAKEQGLLRIEGKDYIVQDGDVIHFRFNV
SIO_010081: PERMA_RS01045
subclass of: SO_0000673
so part of: PERMA_RS01045
location: complement(188787..189899)
location: region:188787-189899:-1
so has part: feature:188787-189899:-1:exon

WP_012676695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188787-189899:-1:exon

PERMA_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01050
old locus tag: PERMA_0213
so part of: sequence
location: complement(189963..190232)
location: region:189963-190232:-1
so has part: feature:189963-190232:-1:exon
subclass of: SO_0000010

position:189963:-1
position: 189963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190232:-1
position: 190232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189963-190232:-1:exon

PERMA_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01050
old locus tag: PERMA_0213
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674800.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIPEYLNEISQKEGFSYFYHDETREVWISGYNKGVRFDLLVRPVKRRYIKVVYETPDERKVILFLSEKDALNRLKKIFSPEETVETV
SIO_010081: PERMA_RS01050
subclass of: SO_0000673
so part of: PERMA_RS01050
location: complement(189963..190232)
location: region:189963-190232:-1
so has part: feature:189963-190232:-1:exon

WP_012676052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189963-190232:-1:exon

PERMA_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01055
old locus tag: PERMA_0214
so part of: sequence
location: 190431..191618
location: region:190431-191618:1
so has part: feature:190431-191618:1:exon
subclass of: SO_0000010

position:190431:1
position: 190431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191618:1
position: 191618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190431-191618:1:exon

PERMA_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01055
old locus tag: PERMA_0214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880851.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dicarboxylate/amino acid:cation symporter
translation: MRRLFSIENLTFIAIILGILSGVYLKDIVINLKLVGNAFLNLLKMITIPLIFASIFVSIASLASIKDIKDMGIKAIVYYFSTTALAVFTGIVVVNFINFSPVDGMNLSSDGFEHKKFTVEALIQSFIPSNIFQSLVEGKVLHVIIFSILFAIAVLKLQQSKKEVITRFFEGVNDSMLTVAKWIINLSPLGVFALVSYIVADKGLGSILSLWQYVLAVVVGLLIHAVFNLGLIGFLFGKFNPLSYFTKVKEALLIAFSTSSSSATLPVTLEVAEERAKIDKKTAGFVLPLGATINMDGTALYEAVAAMFIASLYGIELSIGEQIIIFFTASLAAVGAAGIPSAGLVTMTLVFTAVGIPLEGIAIILAVDRFLDMLRTATNVWGDLIGAKIISRFVR
SIO_010081: PERMA_RS01055
subclass of: SO_0000673
so part of: PERMA_RS01055
location: 190431..191618
location: region:190431-191618:1
so has part: feature:190431-191618:1:exon

WP_012676031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190431-191618:1:exon

PERMA_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01060
old locus tag: PERMA_0215
so part of: sequence
location: 191619..192527
location: region:191619-192527:1
so has part: feature:191619-192527:1:exon
subclass of: SO_0000010

position:191619:1
position: 191619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192527:1
position: 192527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191619-192527:1:exon

PERMA_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01060
old locus tag: PERMA_0215
inference: COORDINATES: protein motif:HMM:NF015509.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AEC family transporter
translation: MLENLFSVLLFFISGYLSRKLRIFDERSADTLIKFIIYIAFPALVIYNVYYLDIKRSFILVILGGWLVIIFSIAVSYIAGKLMRLNRVTLASFVMMASFGNTSFLGFPFQIALLREEGLRYAVVFDQLASFLPVSLISPFILSFGQSSEKIGIDIKKVLTFPPFIALLGAFLIKNIYIPEFVLGSLKMLGMTVIPLALFSVGINLRFSKVRGRLKDIIAVISIKMLMIPVLTVLVLYILSVNPDTEWLSFIIEISMPPMVLASILVIGAGLDRDLAVSSVGIGIIISFITVPLIFYITKAFL
SIO_010081: PERMA_RS01060
subclass of: SO_0000673
so part of: PERMA_RS01060
location: 191619..192527
location: region:191619-192527:1
so has part: feature:191619-192527:1:exon

WP_015898844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191619-192527:1:exon

PERMA_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01065
old locus tag: PERMA_0216
so part of: sequence
location: 192529..192843
location: region:192529-192843:1
so has part: feature:192529-192843:1:exon
subclass of: SO_0000010

position:192529:1
position: 192529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192843:1
position: 192843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192529-192843:1:exon

PERMA_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01065
old locus tag: PERMA_0216
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MREIEKVLFRGELKRLDGLIRDCLNRAGKLNYGDIFSEHFSMMKGLQECMRPEEYINLLRIAEASLTVTLKKAYRERDLEAVKEIKEILQIVKDFNTGDSDDIF
SIO_010081: PERMA_RS01065
subclass of: SO_0000673
so part of: PERMA_RS01065
location: 192529..192843
location: region:192529-192843:1
so has part: feature:192529-192843:1:exon

WP_012676344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192529-192843:1:exon

PERMA_RS01070
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01070
old locus tag: PERMA_0218
so part of: sequence
location: 192830..193960
location: region:192830-193960:1
so has part: feature:192830-193960:1:exon
subclass of: SO_0000010

position:192830:1
position: 192830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193960:1
position: 193960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192830-193960:1:exon

PERMA_RS01070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01070
old locus tag: PERMA_0218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674265.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfurase family protein
translation: MIYFDNAATTKVFPEVLDKIKIWSQDFYANPNSIHSDGQRSRMAVEESRRYIASFLGVPEDEIIFTSCATESNNTIIRGLAEGYPEKDEILISPIEHKSVLNPVRYLSKRGYKIRFLKVDSQGIVDLDDLNKKITPKTLFVSIIHVNNETGVVQDLESIGKVCKERDVLFFSDTVQSFCKIDINSDSVDFFSVSGHKINAPKGIGFFRRKKDIQLTPLLFGGGQEFGLRSGTENVVYIKALSETVRIWNENRAYFIKKLKDLSGKFINGLKTIIPDVEIVSENAERSPNIITVIFPKIDAQTFIMALNTEGIAVSSGSACSSGTPSPSHVLLSYGYSEEKALRAVRFSFGVDNTEEEVDILLEKIKDIFGKLSVFY
SIO_010081: PERMA_RS01070
subclass of: SO_0000673
so part of: PERMA_RS01070
location: 192830..193960
location: region:192830-193960:1
so has part: feature:192830-193960:1:exon

WP_012675201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192830-193960:1:exon

PERMA_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01075
old locus tag: PERMA_0217
so part of: sequence
location: complement(193954..194106)
location: region:193954-194106:-1
so has part: feature:193954-194106:-1:exon
subclass of: SO_0000010

position:193954:-1
position: 193954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194106:-1
position: 194106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193954-194106:-1:exon

PERMA_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01075
old locus tag: PERMA_0217
inference: COORDINATES: protein motif:HMM:NF016223.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: flagellar biosynthesis anti-sigma factor FlgM
translation: MEKLEAYLTEEKLLRMEKIRKIKELIERGEYDIPADEVAEKIIEFFKKNQ
SIO_010081: PERMA_RS01075
subclass of: SO_0000673
so part of: PERMA_RS01075
location: complement(193954..194106)
location: region:193954-194106:-1
so has part: feature:193954-194106:-1:exon

WP_148206391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193954-194106:-1:exon

PERMA_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: tsaB
locus tag: PERMA_RS01080
old locus tag: PERMA_0220
so part of: sequence
location: 194225..194842
location: region:194225-194842:1
so has part: feature:194225-194842:1:exon
subclass of: SO_0000010

position:194225:1
position: 194225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194842:1
position: 194842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194225-194842:1:exon

PERMA_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: tsaB
locus tag: PERMA_RS01080
old locus tag: PERMA_0220
EC number: 2.3.1.234
inference: COORDINATES: protein motif:HMM:TIGR03725.1
GO function: GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
translation: MFLSIDTYSENMGIALINGHHIAARLSLSKTKPFSELIVGKLDDIFNDLGLSADLISGVVVNKGPGSYTALRVGLSVAKTVSFSLSVPIYAYESLDVIAYRYRLYRGKILVAINGGQKEAFLREYISDGKETEPLTDYSIEKISRLREDIEKYKDYLIIEKNLDTFGKNVIKDIDDLSVDGFFYALKYDLKEDPLFLQPVYLRPV
SIO_010081: PERMA_RS01080
subclass of: SO_0000673
so part of: PERMA_RS01080
location: 194225..194842
location: region:194225-194842:1
so has part: feature:194225-194842:1:exon

WP_012675494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194225-194842:1:exon

PERMA_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01085
old locus tag: PERMA_0219
so part of: sequence
location: complement(194828..195796)
location: region:194828-195796:-1
so has part: feature:194828-195796:-1:exon
subclass of: SO_0000010

position:194828:-1
position: 194828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195796:-1
position: 195796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194828-195796:-1:exon

PERMA_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01085
old locus tag: PERMA_0219
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674100.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ppx/GppA phosphatase family protein
translation: MSYKVAVIDIGTYSTRLLISGIHEKDSLEETLRSVDDILSVGRITSLGRNLKETGYLQREAIDETLATLREYVLIAKEYKVERIIGYATAACREAENGNEFLEKAKQLGIEINLITGDEEAYLSFLATAYGLSPEGSFVVVDQGGGSTEFAYGIKENGGYKLESSVSFPFGIVNLTEKFIKSDPPEKKEIEDMRRFITPYIEEAYGKMKECREIIGLGGTITTLVALEYHIFPYSSQKVHGKRLTREAVKKWLDKLSSMTLTERKRIPQIEDKRAEAIISGIVIFDTAMEVFEKDNIRVSDWGLRHGAVIKYIMERFSSNRS
SIO_010081: PERMA_RS01085
subclass of: SO_0000673
so part of: PERMA_RS01085
location: complement(194828..195796)
location: region:194828-195796:-1
so has part: feature:194828-195796:-1:exon

WP_012676606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194828-195796:-1:exon

PERMA_RS01090
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01090
old locus tag: PERMA_0221
so part of: sequence
location: complement(195801..196043)
location: region:195801-196043:-1
so has part: feature:195801-196043:-1:exon
subclass of: SO_0000010

position:195801:-1
position: 195801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196043:-1
position: 196043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195801-196043:-1:exon

PERMA_RS01090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01090
old locus tag: PERMA_0221
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546503.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NIL domain-containing protein
translation: MESIKLKLIYPEEKIKEPILSRVCKNFDVEINIRKANVQENIGWLELELTGKEEEIEKAIQYLVSQGIDVSPLEGQVFME
SIO_010081: PERMA_RS01090
subclass of: SO_0000673
so part of: PERMA_RS01090
location: complement(195801..196043)
location: region:195801-196043:-1
so has part: feature:195801-196043:-1:exon

WP_012676898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195801-196043:-1:exon

PERMA_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01095
old locus tag: PERMA_0222
so part of: sequence
location: complement(196047..196331)
location: region:196047-196331:-1
so has part: feature:196047-196331:-1:exon
subclass of: SO_0000010

position:196047:-1
position: 196047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196331:-1
position: 196331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196047-196331:-1:exon

PERMA_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01095
old locus tag: PERMA_0222
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674189.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MoaD/ThiS family protein
translation: MAVTVRIPTALRRVTQGQGEVQVEASTIAELIDKLEAEFPGIKERLVEPNGEIRKFVNFFVNDEDIRFLKGKDTELKDGDIVAIIPAIAGGLEA
SIO_010081: PERMA_RS01095
subclass of: SO_0000673
so part of: PERMA_RS01095
location: complement(196047..196331)
location: region:196047-196331:-1
so has part: feature:196047-196331:-1:exon

WP_012675618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196047-196331:-1:exon

PERMA_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: thrC
locus tag: PERMA_RS01100
old locus tag: PERMA_0223
so part of: sequence
location: complement(196342..197589)
location: region:196342-197589:-1
so has part: feature:196342-197589:-1:exon
subclass of: SO_0000010

position:196342:-1
position: 196342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197589:-1
position: 197589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196342-197589:-1:exon

PERMA_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: thrC
locus tag: PERMA_RS01100
old locus tag: PERMA_0223
EC number: 4.2.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012513669.1
GO function: GO:0004795 - threonine synthase activity [Evidence IEA]
GO process: GO:0009088 - threonine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine synthase
translation: MPKVKALKCKECGKEYPVEPIHVCEFCFGPLEIEYDYDEIKKNISKEKIENGPKSLWRYVDLLPVDNPKVGLSAGFTPLIKAEKLGKELGLKNLYIKDDSVNHPTLSFKDRVVAVALSKAKEFGFDTAACASTGNLANSVAANAAASGMKCYVFIPSNLETNKIIGSLVFNPTVVAVDGNYDDVNRLSSEIANEFGWAFVNINVRPFYSEGSKTLAFEVAEQLGWKAPDAVVAPLASGSLYTKIWKGFNELKEVGLISDNPPRMYGAQAEGCSPIYKAFKENRDWIVPEKPDTIAKSIAIGNPADGPYAVKVGKESSGDMEIASDQEIIEGIKLLARTEGIFTETAGGTTIAVLKKLAEKGAFDPEETVVVYITGNGYKTMEVLEGQLKKPVHIKPSLTEFKEKVIGQTVKAEEK
SIO_010081: PERMA_RS01100
subclass of: SO_0000673
so part of: PERMA_RS01100
location: complement(196342..197589)
location: region:196342-197589:-1
so has part: feature:196342-197589:-1:exon

WP_012676449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196342-197589:-1:exon

PERMA_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: guaB
locus tag: PERMA_RS01105
old locus tag: PERMA_0224
so part of: sequence
location: 197728..199197
location: region:197728-199197:1
so has part: feature:197728-199197:1:exon
subclass of: SO_0000010

position:197728:1
position: 197728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199197:1
position: 199197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197728-199197:1:exon

PERMA_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: guaB
locus tag: PERMA_RS01105
old locus tag: PERMA_0224
EC number: 1.1.1.205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016291787.1
GO function: GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IMP dehydrogenase
translation: MYNEFIIEEALTFDDVLLLPQKSDVLPHEADVSSYLTPKIKLNIPIVSAAMDTVTEHRLAIALAREGGIGIIHRNMSIEDQMKEVEKVKKAESGMITEPVTIGPDQTVKEALEIMATYKISGVPVVDSENKLIGILTNRDLRFLHKKDYRKPVSQFMTKAPLITAKEGTSLEEAMDILQKHKVEKLPVVDDEGHLKGLITIKDIVKRKQYPNACKDELGRLRVGAAVGTGPDTIDRVTALVEAGVDVIIVDTAHGHSVRVLETVEKVKAEFPDLELVGGNIATGEAAEDLIKAGADAVKVGVGPGSICTTRVVAGIGVPQITAIAKCAEVAHKYGRKVIADGGIRYSGDIVKAIAAGADTVMLGSLFAGTEESPGERIFYQGRAYKVYRGMGSLGAMKARFSSDRYSQENVEKFVPEGIEGRIPFKGPLSDVVYQLVGGLRSGMGYTGSRTIEDLQKNGRFIKITNAGLRESHAHDVYITQEAPNYWID
SIO_010081: PERMA_RS01105
subclass of: SO_0000673
so part of: PERMA_RS01105
location: 197728..199197
location: region:197728-199197:1
so has part: feature:197728-199197:1:exon

WP_012675886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197728-199197:1:exon

PERMA_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01110
old locus tag: PERMA_0226
so part of: sequence
location: 199350..199715
location: region:199350-199715:1
so has part: feature:199350-199715:1:exon
subclass of: SO_0000010

position:199350:1
position: 199350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199715:1
position: 199715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199350-199715:1:exon

PERMA_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01110
old locus tag: PERMA_0226
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546510.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKKSFSQFDMLLAQELTNLERFIIKNPLGTNEFWSEWQEKTGEIIVTKAAIKKALRNHKGSLDESQILKLSSMLEAYKEIAAYLELLRQTALKIRGIEVSNWDIFDGIEGENEGEDDLPF
SIO_010081: PERMA_RS01110
subclass of: SO_0000673
so part of: PERMA_RS01110
location: 199350..199715
location: region:199350-199715:1
so has part: feature:199350-199715:1:exon

WP_012675590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199350-199715:1:exon

PERMA_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01115
old locus tag: PERMA_0227
so part of: sequence
location: 199737..200933
location: region:199737-200933:1
so has part: feature:199737-200933:1:exon
subclass of: SO_0000010

position:199737:1
position: 199737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200933:1
position: 200933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199737-200933:1:exon

PERMA_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01115
old locus tag: PERMA_0227
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546512.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycerate kinase
translation: MFNSYMTLEDVDVTGKRVFVRVDYNVPLDEHGHIVDDTRIRETIPTINYLLDKNAKVILASHLGRPKGERNPKYSLFPVARRLERLLNKEVKFAPDCVGKEVEELVFNMKDGDVVLLENLRFHPGEEGNDPEFAKSLAKLAEIYVIDAFGTCHRKHASMYGIKDFVQPVVMGFLLERELKYFEKALVNPQRPVVAFIGGSKVSSKLGVIKHLLDKADKIFIGGAMAFTFIKAMGYEVGSSLVEDDMFDEALYVIDEAKKRGVKFYLPVDFVCGQAISEQTPVIEVAWQEIPKGWMGLDIGHASITLIKEILKDAQTIIWNGPMGVFEIDKFKGGTFGLAHAIAESPALSIAGGGDTDYAIHKAGVIDEISYISTGGGAFLKLLEGKVLPCLEAITKNE
SIO_010081: PERMA_RS01115
subclass of: SO_0000673
so part of: PERMA_RS01115
location: 199737..200933
location: region:199737-200933:1
so has part: feature:199737-200933:1:exon

WP_012676925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199737-200933:1:exon

PERMA_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01120
old locus tag: PERMA_0228
so part of: sequence
location: 200946..201725
location: region:200946-201725:1
so has part: feature:200946-201725:1:exon
subclass of: SO_0000010

position:200946:1
position: 200946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201725:1
position: 201725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200946-201725:1:exon

PERMA_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01120
old locus tag: PERMA_0228
EC number: 3.1.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881296.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inositol monophosphatase family protein
translation: MEEYIKTAKEAAVLGGHILKEYFKKIKKEDIESKSVKDFVTYVDKLSEERIRNFILSVHPDHAFLGEEEGVVGNTESEYLWIVDPLDGTKNYINGFEIFAVSVALQKGDQIVAGAIYVPMLDKLYWAGKGEGAYLNGERIRISNRPVEMALVSTGFPFRYIEELDSYLKAFREAMITFSAIRRPGAAAVDLAMTAEGVFDGFFEMKLSIWDIAAGVLLIKESGGIFTNFEGEEKLDGNVIAGSPHIHEELYKIVKRTLV
SIO_010081: PERMA_RS01120
subclass of: SO_0000673
so part of: PERMA_RS01120
location: 200946..201725
location: region:200946-201725:1
so has part: feature:200946-201725:1:exon

WP_012675803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200946-201725:1:exon

PERMA_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: pheA
locus tag: PERMA_RS01125
old locus tag: PERMA_0230
so part of: sequence
location: 201725..202810
location: region:201725-202810:1
so has part: feature:201725-202810:1:exon
subclass of: SO_0000010

position:202810:1
position: 202810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201725-202810:1:exon

PERMA_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: pheA
locus tag: PERMA_RS01125
old locus tag: PERMA_0230
EC number: 4.2.1.51
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546517.1
GO function: GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO process: GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prephenate dehydratase
translation: MDYKKKLEELRNKIDQIDEQILRLLNERAKLAQEVGHIKKEHNLPIYVPSREKAIFERLEKLNAELGEIFPTDAVKPVFREIISACRSTEESIKVAYLGPRATFTHQAAIKHFGQAVEHIPVSTIKDVFEEIVKEKADFGVVPVENTIEGIVNYTLDLLVDYPLKITGEVILEISLHLMGINPDVREIVRVYSHRHALAECRDWLRENLPNAQLIEVESTAKAAEMAKDDYESAAVASEAAADIYGLHIIERKIDRHIHNFTRFLVIGTQIPNRTGNDKTTFIFSVKNEVGALYKTLEPLYRHGINMTKIESRPSKKEAWDYIFFTDIEGHIQDERVEKALKELEEISPFFKILGSYPKAH
SIO_010081: PERMA_RS01125
subclass of: SO_0000673
so part of: PERMA_RS01125
location: 201725..202810
location: region:201725-202810:1
so has part: feature:201725-202810:1:exon

WP_012675980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201725-202810:1:exon

PERMA_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01130
old locus tag: PERMA_0229
so part of: sequence
location: complement(202797..203867)
location: region:202797-203867:-1
so has part: feature:202797-203867:-1:exon
subclass of: SO_0000010

position:202797:-1
position: 202797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203867:-1
position: 203867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202797-203867:-1:exon

PERMA_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01130
old locus tag: PERMA_0229
inference: COORDINATES: protein motif:HMM:NF015684.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LptF/LptG family permease
translation: MRILDRYLYKKLTVYLLVVLPSFSFVAVLAELIEVLRKAKQLDIYYLSLYILYQLPEKVYYILPISAVIAFILLAKDLIESKEIYPILLNGISLKSLATKLFIFPLFLSFLQIINLELIMPTAKKEVEKVYSILKNRPPEEEKYLFAYNRWITLDSKSYMYFRFLDFNKREGKDLIFIQFDENYNPVLRIEGNRFKIKGRSILIQNGKIIDLSDIFSFNYRRFKTFDFPVAVDIKNLKKLVKVKKPVSILQLYRSAVIAEKFGYPAGYYWSKFYSKLATVFSALILSIVVFPFLWSRKKDKLFIAFASIIVYWYGTAFIASMAESGAVPYITVLFVDLVYLMVGLFFLSKLRFSEL
SIO_010081: PERMA_RS01130
subclass of: SO_0000673
so part of: PERMA_RS01130
location: complement(202797..203867)
location: region:202797-203867:-1
so has part: feature:202797-203867:-1:exon

WP_015898993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202797-203867:-1:exon

PERMA_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpsB
locus tag: PERMA_RS01135
old locus tag: PERMA_0231
so part of: sequence
location: 204016..204918
location: region:204016-204918:1
so has part: feature:204016-204918:1:exon
subclass of: SO_0000010

position:204016:1
position: 204016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204918:1
position: 204918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204016-204918:1:exon

PERMA_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpsB
locus tag: PERMA_RS01135
old locus tag: PERMA_0231
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674845.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S2
translation: MAFEITMRELLEAGVHFGHQTRRWNPKMAPYIFTKRNGIHIIDLAKTIPLFKVAWEFVRDEVAKGSDILFVGTKKQAQQIIEEQATRCGAYYINERWLGGLLTNFTTVRKSVAKLKKLETMEAEGAFEILPKKEVVKLKKKKEKLEKYLKGIKDMEKIPDIIFIVDTVREELAVKEAKKLGIPVVAIADTNCDPDMIDYPIPGNDDAIKAINLITTKIADAVIEGKSLRESVGEAVETESIEAELMKKAEEEGVAEVGIVESGIHGANAPEKEEKLEEEVDKEVKEHLPEEIEEAKEELK
SIO_010081: PERMA_RS01135
subclass of: SO_0000673
so part of: PERMA_RS01135
location: 204016..204918
location: region:204016-204918:1
so has part: feature:204016-204918:1:exon

WP_012675358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204016-204918:1:exon

PERMA_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: tsf
locus tag: PERMA_RS01140
old locus tag: PERMA_0232
so part of: sequence
location: 204918..205511
location: region:204918-205511:1
so has part: feature:204918-205511:1:exon
subclass of: SO_0000010

position:205511:1
position: 205511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204918-205511:1:exon

PERMA_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: tsf
locus tag: PERMA_RS01140
old locus tag: PERMA_0232
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673460.1
GO function: GO:0003746 - translation elongation factor activity [Evidence IEA]
GO process: GO:0006414 - translational elongation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor Ts
translation: MATDAKLVKTLREMTGAGILECKKALEETGGNLEEAVELLRKRGIAKAAKKAGRETKEGIIHSYIHAGGRVGVLLELNCETDFVARNEVFKELANEIALQIAAMKPQYVSREDIPREVIEKEGEIAREAAIAEGKPEHIAEKIAEGKLEKFFKEVCLLEQPYIKDDKKTIEDLIKEYIAKLGENIKVSRFCRYEIGE
SIO_010081: PERMA_RS01140
subclass of: SO_0000673
so part of: PERMA_RS01140
location: 204918..205511
location: region:204918-205511:1
so has part: feature:204918-205511:1:exon

WP_012676061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204918-205511:1:exon

PERMA_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: pyrH
locus tag: PERMA_RS01145
old locus tag: PERMA_0233
so part of: sequence
location: 205513..206223
location: region:205513-206223:1
so has part: feature:205513-206223:1:exon
subclass of: SO_0000010

position:205513:1
position: 205513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206223:1
position: 206223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205513-206223:1:exon

PERMA_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: pyrH
locus tag: PERMA_RS01145
old locus tag: PERMA_0233
EC number: 2.7.4.22
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674409.1
GO function: GO:0033862 - UMP kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UMP kinase
translation: MGLKYRRVLLKLSGEALMGDREYGIDPFFISELADEIKSVYEIGAEIAIVIGGGNIFRGVKGSSMGMDRATADYMGMLATVMNALALQDILEKKEVPTRVMSAIEMRQIAEPYIRRRAIRHLEKGRIVIFAAGTGSPFFTTDTTGALRAAEIKADVLLKATKVDGIYDKDPVKHPDAKLLKEITYLEAINKDLKVMDHTALTLCMENNLPIVVFNIKKKGNIMKILLGEPIGSIVR
SIO_010081: PERMA_RS01145
subclass of: SO_0000673
so part of: PERMA_RS01145
location: 205513..206223
location: region:205513-206223:1
so has part: feature:205513-206223:1:exon

WP_012675507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205513-206223:1:exon

PERMA_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: frr
locus tag: PERMA_RS01150
old locus tag: PERMA_0234
so part of: sequence
location: 206320..206874
location: region:206320-206874:1
so has part: feature:206320-206874:1:exon
subclass of: SO_0000010

position:206320:1
position: 206320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206874:1
position: 206874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206320-206874:1:exon

PERMA_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: frr
locus tag: PERMA_RS01150
old locus tag: PERMA_0234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673683.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome recycling factor
translation: MIQEYLKDAEKRMKKAVEKFKEELASIRTGRASVGLVENIKVDYYGAEMPLKQIASITTPEPSQILIQAWDQNAVPAIEKALQEANLGANPQTEGNLIRLILPPMTEERRREIVKMLGKMAEEARIAIRNIRRDDKERIEDLKKEGFSEDEVKKALEQLQKITDKYIKQINDLATAKEEEILSI
SIO_010081: PERMA_RS01150
subclass of: SO_0000673
so part of: PERMA_RS01150
location: 206320..206874
location: region:206320-206874:1
so has part: feature:206320-206874:1:exon

WP_012676618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206320-206874:1:exon

PERMA_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01155
old locus tag: PERMA_0235
so part of: sequence
location: 206975..207397
location: region:206975-207397:1
so has part: feature:206975-207397:1:exon
subclass of: SO_0000010

position:206975:1
position: 206975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207397:1
position: 207397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206975-207397:1:exon

PERMA_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01155
old locus tag: PERMA_0235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome maturation factor RimP
translation: MLQPLLEERGLKLVDIEYVTEGKPVLRIYIYNPEGTTIEDCEWISRRIGALLDIEDLIPVSYTLEVSSPGLERKLKNVEEYDIFKGRDIKIVLKEPVDKKNVIKGVLKGREDNNIIVEEEGEEVRIPLENIARANLEFKH
SIO_010081: PERMA_RS01155
subclass of: SO_0000673
so part of: PERMA_RS01155
location: 206975..207397
location: region:206975-207397:1
so has part: feature:206975-207397:1:exon

WP_041530974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206975-207397:1:exon

PERMA_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: nusA
locus tag: PERMA_RS01160
old locus tag: PERMA_0236
so part of: sequence
location: 207410..208534
location: region:207410-208534:1
so has part: feature:207410-208534:1:exon
subclass of: SO_0000010

position:207410:1
position: 207410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208534:1
position: 208534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207410-208534:1:exon

PERMA_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: nusA
locus tag: PERMA_RS01160
old locus tag: PERMA_0236
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008286547.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor NusA
translation: MAVKLKNVIEAVAKEKNVPEEIIEKALIDGITAAVKKEYGYKDNVQVIFDKEADELKVLLKKRVTPFVENPKRDISLEEAKKIDPKAEVGSYVFVPLNLEELGRIALNAAKEVITHKVARVEKNILFKEFKELEGKIVTGTVRRFEDGDIIVDLGRIEAVLPEEEQIKKEKYRVGDRIRALILKVIKDGSYPVYERGKVKRVIKPIDRDKPLVILSRTHPNFLRKLIEIEVPEIQEGEIEIKAIAREPGERAKVAVWTEDKNIDPVGVVVGLKGSRIQNVSAELSGEKIDVIEWDPDPAQFILRALSPSHPKKWRLLEDEKRIEVAVPKNELSLAIGKGGINAKLAHKLTGWHIDILSEEDFERIQQLPRKTAG
SIO_010081: PERMA_RS01160
subclass of: SO_0000673
so part of: PERMA_RS01160
location: 207410..208534
location: region:207410-208534:1
so has part: feature:207410-208534:1:exon

WP_012676807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:207410-208534:1:exon

PERMA_RS01165
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01165
old locus tag: PERMA_0237
so part of: sequence
location: 208676..209056
location: region:208676-209056:1
so has part: feature:208676-209056:1:exon
subclass of: SO_0000010

position:208676:1
position: 208676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209056:1
position: 209056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208676-209056:1:exon

PERMA_RS01165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01165
old locus tag: PERMA_0237
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRKGMKIDPERLRDQLRKQIVNLIQIGWRGRIISIGYDQAEKEINKGRKGFLILATDVAERTKRNILRLFKGDYFEIFTKEELGSFIGKKNVGLIFVPETKFGLKLKSLIKQFLDLEGGSVNCQR
SIO_010081: PERMA_RS01165
subclass of: SO_0000673
so part of: PERMA_RS01165
location: 208676..209056
location: region:208676-209056:1
so has part: feature:208676-209056:1:exon

WP_238527222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208676-209056:1:exon

PERMA_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: infB
locus tag: PERMA_RS01170
old locus tag: PERMA_0238
so part of: sequence
location: 209044..211671
location: region:209044-211671:1
so has part: feature:209044-211671:1:exon
subclass of: SO_0000010

position:209044:1
position: 209044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211671:1
position: 211671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209044-211671:1:exon

PERMA_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: infB
locus tag: PERMA_RS01170
old locus tag: PERMA_0238
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015898894.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-2
translation: MSKIKISDLAKEFGMTWKELAGEIEELTGKTVKSPSTKIDEEIVSLLRDVLQPAEEVEEAVEKKVEKEKGYRIFELSHDWNIPFEELAEDLKAIGYTKSIDNFTILDEETVNRLKDYIKEKKEKEKEKKKEEKEEKKVKVEKKVEEKPVEVKKEEKKEEKVEKVEKKEEKVQKKPEKKEVKRKEKIVAKEEKPERKKAVEEKPKKKEVKEVKKVEKPKVEVVEEKEETKIKIPEAEIRKETKEEKAELEALRKLMGPQPKKKKKKKKKKEEEKAPVETKEKEEELKIAIIPEVVTVRELSDILDMPVNEIMAELLKRGILATVNQTIDPEIALQIAEEHGYLAEIQKEGEEVKIVEELPQEEKKKLLGEEEEEEENLVERPPVVTVMGHVDHGKTTLLDTIRKTDVAAKEKGGITQHIGAYKIKLSNGKEITFLDTPGHEAFTTLRARGSKVADIAVLVVAADDGVKPQTVEAINHAKSAGVPIIVAINKIDKPGADPERVKRELAQYELIPEEWGGDTIMVPVSAKTGQNVEELLENILLVSEILELKANPNRPAIGTIIESKLDPKRGPVATVLIENGTLHQGDYFVAGFTWGKVRAMFDERGRQVKEATPGTPVEVLGFNEVPQAGDKFVVKPSEREARLLAEQRKQKYEEELQAKRTRIHLENLKDVKEINIILKADVQGSLEAITKSIEELSEKFEDVTINIIHSGIGAITESDVMLAAASNALIIGFNVRPDASARKAAEEEDVDIKIYGIIYDLIDDLEKALKGMLTPKEREVLLGICEVKQIFRIKGVGTVAGCMVTEGVIRRNAKARLVRDGVVIYDGEITSLKRFKEDVKEVAKGYECGLMLKDFNDIKPGDQIEAYEIVQEKAE
SIO_010081: PERMA_RS01170
subclass of: SO_0000673
so part of: PERMA_RS01170
location: 209044..211671
location: region:209044-211671:1
so has part: feature:209044-211671:1:exon

WP_015898894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209044-211671:1:exon

PERMA_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01175
old locus tag: PERMA_0239
so part of: sequence
location: complement(211673..212308)
location: region:211673-212308:-1
so has part: feature:211673-212308:-1:exon
subclass of: SO_0000010

position:211673:-1
position: 211673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212308:-1
position: 212308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211673-212308:-1:exon

PERMA_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01175
old locus tag: PERMA_0239
inference: COORDINATES: protein motif:HMM:NF018894.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilZ domain-containing protein
translation: MEKSFLREVLNWMKEQDSIEVAVFFNEVPVKAKLKVLDIDYERKQIIWSFNEKLRIPLLDNRVIYFKYRNDIFIATVIIHDDKEMVTSFPTLALEPKLNRRYVRVTTSPENPAFLIIDGKKYPIEDISEAGIGIILPSDIGLKEGEEKEMELELKGTVFDIKGKIVYIKDQGNNLIRVGIKLLDIPNRVRNQIVKYVFERQRDIAKKITMF
SIO_010081: PERMA_RS01175
subclass of: SO_0000673
so part of: PERMA_RS01175
location: complement(211673..212308)
location: region:211673-212308:-1
so has part: feature:211673-212308:-1:exon

WP_012675277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211673-212308:-1:exon

PERMA_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: dprA
locus tag: PERMA_RS01180
old locus tag: PERMA_0241
so part of: sequence
location: 212349..213407
location: region:212349-213407:1
so has part: feature:212349-213407:1:exon
subclass of: SO_0000010

position:212349:1
position: 212349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213407:1
position: 213407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212349-213407:1:exon

PERMA_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: dprA
locus tag: PERMA_RS01180
old locus tag: PERMA_0241
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545825.1
GO process: GO:0009294 - DNA-mediated transformation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-processing protein DprA
translation: MSAIDYIQLSYIKGIGNKTLKLLINTFGSPENIFQLSFSELSSVVGSSVAELILKRDKSLKKKAEEEFLRAEKSGVKIIHFNDHSYPELLREIPDPPLYLYCKGRLDLARAVSVVGSRRFTSYGKTVTKQIVSYLSDQNVNIVSGMALGIDSIAHETALERSCLTTAVLGCGIDIAYPPENKKLYERIIENGAVISEFPMGTPPYKYNFPVRNRTVAGISYATIVTEASEKSGALITARLANDYGRVVFSVPANINNPLAKGNNILIKDGAIPVVDMESIDENLPYIKRSDKEEINLSEIEKKILFILSSPEHIDIISEKMNISVSDLMVILFDMELKGLITSENGIYMRSV
SIO_010081: PERMA_RS01180
subclass of: SO_0000673
so part of: PERMA_RS01180
location: 212349..213407
location: region:212349-213407:1
so has part: feature:212349-213407:1:exon

WP_012675508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212349-213407:1:exon

PERMA_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01185
old locus tag: PERMA_0240
so part of: sequence
location: complement(213375..214694)
location: region:213375-214694:-1
so has part: feature:213375-214694:-1:exon
subclass of: SO_0000010

position:213375:-1
position: 213375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214694:-1
position: 214694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213375-214694:-1:exon

PERMA_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01185
old locus tag: PERMA_0240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008286334.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: APC family permease
translation: MKKSKIGLWEAVSLAVGTMIGAGIFSILGVGAQICENNLPLAFFIAAVISFSVAYSYSFLGSKFISNAGPIEFIIRGIGDNPVTGTLSILMWFSYVISISLFAKAFSGYFLALFHLPDKPVFVASVEGAIIVLFTALNFFGSKAVGKAEFWIVLIKISVLLSFVVLGIWSINPDFIKPVFNNSSIVNTFFASSVLFLTYMGFGLITNASENIENPEKNVPRAIYISIFIVAFIYISVSVVALGNLGVEGLIRSKEYALAEAAKPFLGDIGFTLVAIGALFSTSSAINATLYGGANIAYVLSKKGHLPKVFERKVWFNEPEGLFITAVLSYIFALFFDLNGISALISYVFLIIYIFVIVSHYRLSNIAGGKKVFIILNLIVILSVFIILLIYQWNNQRDSFITGFFILSFAFLFEIVYRQITGRIFIKRKLNRSHINTIF
SIO_010081: PERMA_RS01185
subclass of: SO_0000673
so part of: PERMA_RS01185
location: complement(213375..214694)
location: region:213375-214694:-1
so has part: feature:213375-214694:-1:exon

WP_012676390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213375-214694:-1:exon

PERMA_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01190
old locus tag: PERMA_0242
so part of: sequence
location: complement(214695..216824)
location: region:214695-216824:-1
so has part: feature:214695-216824:-1:exon
subclass of: SO_0000010

position:214695:-1
position: 214695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216824:-1
position: 216824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214695-216824:-1:exon

PERMA_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01190
old locus tag: PERMA_0242
EC number: 2.7.7.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676485.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MEGIGDITVEKVETKIQETPISIETGYFAKQSNGAVIVRQGETAVFVAAVISEEAQADIDFLPLTVDYREKTYAYGKIPGGFVKREGKPTVREILVSRLIDRPIRPMFPKGFFNDVIITAMTLSADDKYDPDVLAIVGASAALHITEAPFEGPVAGVRVCRLDGEFIVNPTYEQRNRSDIDIVVAGTKDAIVMVEGGSEEVSEEVILDAILFAHEEIKKLCDLQEELRSKVGKEKITVEIDEEDERIKAELESIVRESVKEAFNILDKKERNKRIKEIYEEAIQKIEIPEEKEKKAEVIYKEIVSNIMREKVLKEKVRIDGRRPDEIRPIWIRTGLFPRIHGSAIFTRGQTQAFVATTLGAPGEEQIEESIEEGEEKKRFMLHYNFPPFSTGEARPPRAPSRREIGHGNLAERAIEPLIPDEEEFPYVIRVVSEILESNGSTSMATVCGASLSLFDAGVPMKKHVAGIAMGLLKEDDDYVILTDILGDEDHLGDMDFKVAGTRDGVTSIQMDIKIKGLSKEILQEALEQAKKARMHILDLMYKAMPQPRPELSPHAPKVITMRVLPEKIPVIIGPSGKNIKKIIDETGVKIDLDQEGLVRIYAVDGESADKAKEMIERLIMDIELGEVYMGKVTRVEDYGAFVELMPGKLSLLHVSQISPERIRSAKEKIKVGDILTVKVIDIDEMGRAKVSLKEVREGEEPKNKFLFE
SIO_010081: PERMA_RS01190
subclass of: SO_0000673
so part of: PERMA_RS01190
location: complement(214695..216824)
location: region:214695-216824:-1
so has part: feature:214695-216824:-1:exon

WP_012676485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214695-216824:-1:exon

PERMA_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpsO
locus tag: PERMA_RS01195
old locus tag: PERMA_0243
so part of: sequence
location: complement(216824..217108)
location: region:216824-217108:-1
so has part: feature:216824-217108:-1:exon
subclass of: SO_0000010

position:217108:-1
position: 217108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216824-217108:-1:exon

PERMA_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpsO
locus tag: PERMA_RS01195
old locus tag: PERMA_0243
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675422.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
translation: MSITPEKKAEIIKRFARHEGDTGSPEVQIAILTERIKNLTEHIKKNKKDLHSRRGLIGMVNKRRKLLNYLKRTDFERYQKIIQELNIREATGSR
SIO_010081: PERMA_RS01195
subclass of: SO_0000673
so part of: PERMA_RS01195
location: complement(216824..217108)
location: region:216824-217108:-1
so has part: feature:216824-217108:-1:exon

WP_012675422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216824-217108:-1:exon

PERMA_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01200
old locus tag: PERMA_0244
so part of: sequence
location: 217272..217790
location: region:217272-217790:1
so has part: feature:217272-217790:1:exon
subclass of: SO_0000010

position:217272:1
position: 217272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217790:1
position: 217790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217272-217790:1:exon

PERMA_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01200
old locus tag: PERMA_0244
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYLEDIHGKPRVMVDPYFYHIEKFTDGFHIVYYRFQICDMFIKIGDIGDQYKDFFKEILDLIDGNKPSGTKEFSMYDWDTGDISEFYMTITRLQNIYYVEAKIRYLEIFDRDGEKNEKIYGLVDENLFDDFLYKNHEPGYIVKFYTSAEQLRKFANGILDKLDKLYKNPFIW
SIO_010081: PERMA_RS01200
subclass of: SO_0000673
so part of: PERMA_RS01200
location: 217272..217790
location: region:217272-217790:1
so has part: feature:217272-217790:1:exon

WP_012676237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217272-217790:1:exon

PERMA_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01205
so part of: sequence
location: complement(217815..218243)
location: region:217815-218243:-1
so has part: feature:217815-218243:-1:exon
subclass of: SO_0000010

position:217815:-1
position: 217815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218243:-1
position: 218243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217815-218243:-1:exon

PERMA_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890545.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MNYKKVFVDANIILDLFLKDRPYSEYSKESFFYLQKNNVELLTSCDLITTVYYVLRKYNKQKALENLSYTLDLLYLIPFSNEETQKAIDLMQEDKNFKDLEDTLQYVLAKENECDLILSNDDDFYSPDIKKINTKDFVEKLM
SIO_010081: PERMA_RS01205
subclass of: SO_0000673
so part of: PERMA_RS01205
location: complement(217815..218243)
location: region:217815-218243:-1
so has part: feature:217815-218243:-1:exon

WP_041530853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217815-218243:-1:exon

PERMA_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01210
old locus tag: PERMA_0246
so part of: sequence
location: complement(218233..218496)
location: region:218233-218496:-1
so has part: feature:218233-218496:-1:exon
subclass of: SO_0000010

position:218233:-1
position: 218233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218496:-1
position: 218496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218233-218496:-1:exon

PERMA_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01210
old locus tag: PERMA_0246
inference: COORDINATES: protein motif:HMM:NF013561.2
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix protein, CopG family
translation: MNVKSRKVRKNITLSKEAEEKLKELAKIEKKSQSELIEELINEVYKEIEKKKKLEALKRIIENRKYFEGIDPNITIQKIKEQMGSEL
SIO_010081: PERMA_RS01210
subclass of: SO_0000673
so part of: PERMA_RS01210
location: complement(218233..218496)
location: region:218233-218496:-1
so has part: feature:218233-218496:-1:exon

WP_015898999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218233-218496:-1:exon

PERMA_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01215
old locus tag: PERMA_0247
so part of: sequence
location: complement(218871..219371)
location: region:218871-219371:-1
so has part: feature:218871-219371:-1:exon
subclass of: SO_0000010

position:218871:-1
position: 218871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219371:-1
position: 219371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218871-219371:-1:exon

PERMA_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01215
old locus tag: PERMA_0247
inference: COORDINATES: protein motif:HMM:NF024491.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase D-like domain-containing protein
translation: MPKDKIQILSSGYVFIEEGVVSVESKLLEMLDNTAHELFIIMYTISAKPENFWNKLENLLKNSVQVNFVIEGSIQHSTKTTDILNRLQKYENFNLYFYSDRNPLHAKLIVSDGKRAILGSANISGGGLVQNHEIAVYIEGEKAWTLKKLAKRLIRMLSNENNLSNL
SIO_010081: PERMA_RS01215
subclass of: SO_0000673
so part of: PERMA_RS01215
location: complement(218871..219371)
location: region:218871-219371:-1
so has part: feature:218871-219371:-1:exon

WP_012675445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218871-219371:-1:exon

PERMA_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: drmB
locus tag: PERMA_RS01220
old locus tag: PERMA_0248
so part of: sequence
location: complement(219377..221233)
location: region:219377-221233:-1
so has part: feature:219377-221233:-1:exon
subclass of: SO_0000010

position:219377:-1
position: 219377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221233:-1
position: 221233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219377-221233:-1:exon

PERMA_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: drmB
locus tag: PERMA_RS01220
old locus tag: PERMA_0248
inference: COORDINATES: protein motif:HMM:NF038324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DrmB family protein
translation: MEIRRSQFIRTYGPGAIIETPRTPAIILSFDTGSEPRDFLQRGYLIKDPILESYLKSIIKKYENRMDLKDLRVRIFELPFSSEEKNIKFSAKNFQKWYLCPEHRILWKYDYRSQKDCPRCRGDYPTKSSPVRFIQVCENGHLDDIQWDMEVHTIYKNNKPTRCSRTYFRWEGPGTGTSETKIICEECKRYIKLSDLYNRKLKCTGRFPEKERPRSSERFEEDCSENATVSLRMASNLRIPEIESIFMVWPRSNEIGSILASNIAMSVEILTTIEFYEEGLLSYDNLKAKFRNILKNAREAKNISEEEYNKLKKNESDILALKKYLEEVKKLEKKEYSYRDIIDMEYRNLHEGAITGKLEDLPETGRKYLEINSTKTISKKFLSVTPIDILTVVETQVAYRRLDISKGKPVLIHKTGEDGTYYFPSIMINGEGIFLDFHKIKLNEETDTFQSWLKAFKNRNMYNQEFLFKIKEEKYELHPTFVFLHTFAHLLIKVLSLYSGYPATSIREKIYITDINTDNPSGGVVLYTATEDEGGALGGLVSLVEEKRMKKIFNNVINISHSCSNDPVCTENKFNIGKYAGASCYSCTAISETSCDHRNLWLDRNLFNENINLLKDWL
SIO_010081: PERMA_RS01220
subclass of: SO_0000673
so part of: PERMA_RS01220
location: complement(219377..221233)
location: region:219377-221233:-1
so has part: feature:219377-221233:-1:exon

WP_012676253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219377-221233:-1:exon

PERMA_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: drmA
locus tag: PERMA_RS01225
old locus tag: PERMA_0249
so part of: sequence
location: complement(221251..225210)
location: region:221251-225210:-1
so has part: feature:221251-225210:-1:exon
subclass of: SO_0000010

position:221251:-1
position: 221251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225210:-1
position: 225210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221251-225210:-1:exon

PERMA_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: drmA
locus tag: PERMA_RS01225
old locus tag: PERMA_0249
inference: COORDINATES: protein motif:HMM:NF038326.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DISARM system helicase DrmA
translation: MALLDYIKDIYRDALGPRNFDPEEILETQNPANEFITGILSSSKHAVKIDGKSAFIEDEIILDKLDEEDVEVSPDIEPVSSELLNPVLNPRKLPVSIGINFSVESKETIELDLCVTWGKYFKIEESNKSDENEEERKKWIRKSFSYVQEDIKLEKDEEEFEIPEEEIIIGEKKYENKLRLKIEKRLKSKNKYFISVYLINETEVPREYEDLINPPTEYLIFQPQIRVKIKKGKLSGSYSRAVETGIDEEEKLYEFPYLESNTLFPAKGSMCAAIWKEIDPLQENPDKFDFMWVDGKTIKNKDEKKYKKFLECDLRTEFLPVIPQGIPDFDIKGINFDPEVLSEIQPDEIDNYFSTFLNKYKNWILRKKEEISHTSNPSLAEKIINKHEIVYDRIEKGINLLKEKEEVLLCFNFANKVISVVQKDWAGKKEFKWRPFQLAFFLMTMESIVNPDSPDRNYIDILWVPTGGGKTESYLAISAFLLAYRRRTKKDTGYGTAIISRYTLRLLTVQQFTRTLKTILACEYLRIFPNKSGNKGWLPGWAEEKVKDDYVWEKYRFSAGLWVGGAITPNKLHTTTGRGGKKFYGAIDLLKKNDTIYKLSGSDDKRDKNEVYNLKRSQNVALISRCPVCGEYLSIPEEGILTEDNGIELNFIVRLHSFSGNNINEDVLEPLKTLIAENESYDFEPLEIRKVDTEDEIYFMKIYILTGELKPDDVIEIWEDLQSNINTLGYEMELLSLSPDKPGYFPWGKTGSIYIDFTILCPNIDCPLNNHNYEWHELVPSKDNFISIFDTSEFEEFSWMKNFIPVPAYFVDEQIYSKLPSIIISTVDKFARLPFEPATASIFGNIDFYSSLYGFFREDAIYSARRDLKDITKYGIPVNKPEPPELVIQDELHLIEGPLGSLVGLYETIIEELCKENSEGKKLKYIASTATIKHAGYQTDALFLREAFQFPPVGLNIEDNFFSRIETPSLDNILSNEYVPGKIYIGVMSPGKGPLTPQVRLYARLWMTDQLTQGNNPMVGYYNAVRELAGGRRILEQDISERLTKDLGFKGKLPEKTDILELSSRMDSDEISLLIEQLEKEKINPHFIITTSVFGTGVDIPHLRFMIMNGQPKTTATYIQATGRVGRKNTALVITFYRSTRPRDISHYEFFAGYHLALYRYVEEVSVFPFSKGAVYRGNGPVIVGIMRNSRNMKINWISNESPIQMKNWHHNPEIQSDFNRAANILQKRNECQKAEIRKIDSSELESIIKDRYQGLDKWKRVARINRNLLFTEYFKVKNPVVLGDLEHEKLSEDFVVYRRVPNSLRNIEDTVNIEIHPY
SIO_010081: PERMA_RS01225
subclass of: SO_0000673
so part of: PERMA_RS01225
location: complement(221251..225210)
location: region:221251-225210:-1
so has part: feature:221251-225210:-1:exon

WP_012675700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221251-225210:-1:exon

PERMA_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01230
old locus tag: PERMA_0250
so part of: sequence
location: complement(225213..225899)
location: region:225213-225899:-1
so has part: feature:225213-225899:-1:exon
subclass of: SO_0000010

position:225213:-1
position: 225213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225899:-1
position: 225899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225213-225899:-1:exon

PERMA_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01230
old locus tag: PERMA_0250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: T/G-specific DNA glycosylase
translation: MKKTSVNCKALLDDFDVKHFHEKLFSWWEDHKRIYPWRFEKDPYKVLIAEIFLHRTNSSQVEKVYKDFIDKFPDIRSLLKAKKEEISPLLQSLGLKWRQELFNKMILILREKYGGNIPLNHKELKSLPGIGDYIAAAVIIFTLNNPLPLLDSNIVRVTGRLFCLKITDSSRRSRLFRNYIYCLIYKNDPRVFYYALIDFAALVCKPKDPDCDKCPLRNFCCIYKNQGR
SIO_010081: PERMA_RS01230
subclass of: SO_0000673
so part of: PERMA_RS01230
location: complement(225213..225899)
location: region:225213-225899:-1
so has part: feature:225213-225899:-1:exon

WP_012676581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225213-225899:-1:exon

PERMA_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01235
old locus tag: PERMA_0251
so part of: sequence
location: complement(225896..226819)
location: region:225896-226819:-1
so has part: feature:225896-226819:-1:exon
subclass of: SO_0000010

position:225896:-1
position: 225896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226819:-1
position: 226819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225896-226819:-1:exon

PERMA_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01235
old locus tag: PERMA_0251
inference: COORDINATES: protein motif:HMM:NF012372.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA cytosine methyltransferase
translation: MKVLDLFCGMGGFSYGLSKAGYEITGVDINKWVEKIFEKNCIGKAIIKDLKNDFIFDENPDIIVGGSPCKPWSTLNLKKRGSSHEDFVLMEKYFLHVLEIKPAVFVFENVVPVGKDKTLRKFIRKLRAHGYSIYETKIKYSDFGAAIARERYFAFGFYKDKSARKQFEKLLIGSKNSPKTVKHVIEKYRNKEEKEVPDHEWPNLKTIDKYLDKYETGKFGWYILDWNKPSPSFGNIMKTYILHPGFNNGGPKRTISIREAEAIFGFKDDFAFPEGMGKGMRYQMIADAVSPDFSYLIGGLLKTILLR
SIO_010081: PERMA_RS01235
subclass of: SO_0000673
so part of: PERMA_RS01235
location: complement(225896..226819)
location: region:225896-226819:-1
so has part: feature:225896-226819:-1:exon

WP_012676941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225896-226819:-1:exon

PERMA_RS10680
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10680
old locus tag: PERMA_0252
so part of: sequence
location: complement(226974..227414)
location: region:226974-227414:-1
so has part: feature:226974-227414:-1:exon
subclass of: SO_0000010

position:226974:-1
position: 226974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227414:-1
position: 227414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226974-227414:-1:exon

PERMA_RS10680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10680
old locus tag: PERMA_0252
inference: COORDINATES: protein motif:HMM:NF014040.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Dna2/Cas4 domain-containing protein
translation: MYDHELKIVGHPDGVIDNTVSEFKTISPWTLKKAEVLPYPHHIFQLTGYMYLLRKEKGLIVYIEKSTGEIYEYPVQLTDEDIKILKAKVNLIYTLSQQDMETLNLLDKETLDVKEWQCKYCFYKHCCPVNNKGGVSIEHENSAYSS
SIO_010081: PERMA_RS10680
subclass of: SO_0000673
so part of: PERMA_RS10680
location: complement(226974..227414)
location: region:226974-227414:-1
so has part: feature:226974-227414:-1:exon

WP_274377784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226974-227414:-1:exon

PERMA_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01245
old locus tag: PERMA_0253
so part of: sequence
location: complement(227722..227808)
location: region:227722-227808:-1
so has part: feature:227722-227808:-1:exon
subclass of: SO_0000663

position:227722:-1
position: 227722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227808:-1
position: 227808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227722-227808:-1:exon

PERMA_RS01245
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 123214
locus tag: PERMA_RS01245
old locus tag: PERMA_0253
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(227772..227774),aa:Leu,seq:taa)
SIO_010081: PERMA_RS01245
subclass of: SO_0000673
so part of: PERMA_RS01245
location: complement(227722..227808)
location: region:227722-227808:-1
so has part: feature:227722-227808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227722-227808:-1:exon

PERMA_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01250
old locus tag: PERMA_0254
so part of: sequence
location: 227980..229119
location: region:227980-229119:1
so has part: feature:227980-229119:1:exon
subclass of: SO_0000010

position:227980:1
position: 227980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229119:1
position: 229119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227980-229119:1:exon

PERMA_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01250
old locus tag: PERMA_0254
inference: COORDINATES: protein motif:HMM:NF020084.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FIST N-terminal domain-containing protein
translation: MEKDIKKAKEIVSKTASEMNPDLFIFFAPYRFFESGSLFNLSEDTNCIGISTVAVVKDDQIEYNAFGGIFISFEKTGRCNLRQIDSISADLEGSINFLEKNLIPEERGTNLIFSTSSNLQVNKVLNRVFKNRNRDIRLYGGIASSDAPDFRTYISVNGQLLKDGFVILNLENVISFNTISLGFIPVGTTYTVTKARDNKIYSLDDMPVVYFLNNILKNTGIKPQDLDPVKTSEVLWEFPFLFIEDSGYISHLLVPMCFDNEDESFMFYGEVLEGSKIKLSTGDSEDILMDVKIRSEEFGNIINVRSLKPDFVLNITCTARNYILLGDNMESKEQEIYYEKIKEIPFAGFLTFGEIGPDRMGKAGKFYNETSILVGFVER
SIO_010081: PERMA_RS01250
subclass of: SO_0000673
so part of: PERMA_RS01250
location: 227980..229119
location: region:227980-229119:1
so has part: feature:227980-229119:1:exon

WP_012675719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227980-229119:1:exon

PERMA_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01255
old locus tag: PERMA_0255
so part of: sequence
location: 229116..230498
location: region:229116-230498:1
so has part: feature:229116-230498:1:exon
subclass of: SO_0000010

position:229116:1
position: 229116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230498:1
position: 230498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229116-230498:1:exon

PERMA_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01255
old locus tag: PERMA_0255
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF and EAL domain-containing protein
translation: MNYKIKERILKNLLVEITKKYDYMINEYKAKDSQSEEKLLTDYLTSLLNRDGFKKTLLELSKLSSLEEKSIAVITLDLDNFKIINTSYGYEIGDLFLKEIGKLLKSISRSNWTVARIGGDEFGIAIYGIKFNEILFEVERIKSRIENFRFKVGDSYLSTTVSVGVSIYSPDSDTDILSVLNKAEVSTYQSKTKGKNIATFSSEDIQEKLKDLEEKKNIIVHAINNKDAIKVYVQPIVSLKKNEIIGGELLLRIEYRGKIIPAVDFIESSIFFGLLPKLEKIQLDKFLTSGSIKKLRGRYIFINRHIKAGQLKNIKSLIDELSYHKKEISGINFVIEITENSFVENFSYLKDIVHYAKKRDILFAVDDFGAGFASFGYVSKVPIDIIKIDGSIINECISDKKHQAIVKAISILSRELDMKTVAEFIDSIDKLKKCTVFDIDYGQGFYFNRPLELEDFLKLL
SIO_010081: PERMA_RS01255
subclass of: SO_0000673
so part of: PERMA_RS01255
location: 229116..230498
location: region:229116-230498:1
so has part: feature:229116-230498:1:exon

WP_015898871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229116-230498:1:exon

PERMA_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01260
old locus tag: PERMA_0256
so part of: sequence
location: 230510..231295
location: region:230510-231295:1
so has part: feature:230510-231295:1:exon
subclass of: SO_0000010

position:230510:1
position: 230510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231295:1
position: 231295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230510-231295:1:exon

PERMA_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01260
old locus tag: PERMA_0256
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673982.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding cassette domain-containing protein
translation: MKRKIIVQNLTKKFGEREVLKNISFDVKEGEIFVIMGGSGSGKSTTIKHIIGLLKPTSGKIIVDDTDITALSDRELIEFRKRMGYLFQEGALFDSLTVWENVGFYFLENTKMPVKDIRKIAVEKLSLVGLKGIEDLYPSQLSGGMRKRVSLARAISTDPEIILYDEPTSGLDPVTSAMIDNLIVHLRDKIGVTSIVVTHDLDSAFSIADRIAMIHKGVIYAVGTPDEIKNHPDPVVQQFINRKAEGPITEELFKELKLSKS
SIO_010081: PERMA_RS01260
subclass of: SO_0000673
so part of: PERMA_RS01260
location: 230510..231295
location: region:230510-231295:1
so has part: feature:230510-231295:1:exon

WP_012676175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230510-231295:1:exon

PERMA_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: thrC
locus tag: PERMA_RS01265
old locus tag: PERMA_0257
so part of: sequence
location: 231364..232434
location: region:231364-232434:1
so has part: feature:231364-232434:1:exon
subclass of: SO_0000010

position:231364:1
position: 231364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232434:1
position: 232434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231364-232434:1:exon

PERMA_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: thrC
locus tag: PERMA_RS01265
old locus tag: PERMA_0257
EC number: 4.2.3.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012991597.1
GO function: GO:0004795 - threonine synthase activity [Evidence IEA]
GO process: GO:0009088 - threonine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: threonine synthase
translation: MDNCKWRGIITAYREFLPVTDKTPVVTLYEGNTPLIDAPNLSKKIAPDKDLKIYLKYEGLNPTGSFKDRGMTMAISKAKESGKTAVICASTGNTSASAAAYAARAGMDAYVILPKGAVALGKLSQAMVYGAKIIALMGNFDDALSIVREIGEKYPVEVVNSVNPYRIEGQKTASFEIIDALGDAPDYHFIPVGNAGNITAYWKGYKEYKEAGRSTKLPRMIGWQAEGAAPIVKGFPIKNPQTIATAIKIGNPYSWQPALQAAKESNGFIDAVSDEEILEAYRLVASTEGVFCEPASAASVAGVIKAYRKGLFKGGETVVCTLTGNGLKDPDTVIKASEKPVEMPPDINEIARYLGL
SIO_010081: PERMA_RS01265
subclass of: SO_0000673
so part of: PERMA_RS01265
location: 231364..232434
location: region:231364-232434:1
so has part: feature:231364-232434:1:exon

WP_012676942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231364-232434:1:exon

PERMA_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01270
old locus tag: PERMA_0258
so part of: sequence
location: 232431..233375
location: region:232431-233375:1
so has part: feature:232431-233375:1:exon
subclass of: SO_0000010

position:232431:1
position: 232431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233375:1
position: 233375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232431-233375:1:exon

PERMA_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01270
old locus tag: PERMA_0258
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-dehydropantoate 2-reductase
translation: MNIVVFGLGAVGTVFATFLKEAGYKVYGITKDKYLNDLKSSELRVKGIWGDHRVKLDGIFSSVSPLKDKKIDLIILSVKSYDTQNAVKSLKDMVSEKTKVIVAQNGYGNYEIVSEEIGKEHTLLARVIFGSKIIKPGFAEVTVNADDVRIGDPSGTIPEEEIIKIACIIKNAGIPASYDPDVYKTLWYKILYNCALNPLGALLSCSYGDLAENEETRKIMNRVIKEIFEVTEAHGIELNYESPEEYIEHFYKNLIPPTRNHYPSMYYDLKAGKKTEIDALNGAIVRLAREKDIYVPVNETITGMIKFIEGRLRG
SIO_010081: PERMA_RS01270
subclass of: SO_0000673
so part of: PERMA_RS01270
location: 232431..233375
location: region:232431-233375:1
so has part: feature:232431-233375:1:exon

WP_012675455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:232431-233375:1:exon

PERMA_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rph
locus tag: PERMA_RS01275
old locus tag: PERMA_0259
so part of: sequence
location: 233434..234219
location: region:233434-234219:1
so has part: feature:233434-234219:1:exon
subclass of: SO_0000010

position:233434:1
position: 233434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234219:1
position: 234219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233434-234219:1:exon

PERMA_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rph
locus tag: PERMA_RS01275
old locus tag: PERMA_0259
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676856.1
GO function: GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease PH
translation: MRPDGRKPTQLRPVKIIRDFNIYAEGSVLIEMGNTKVIITASIEEKVPPFLRGTGQGWITAEYAMLPRSTESRSIREVVRGAPSGRTQEIQRLIGRSLRGVVDLKKLGERTLWVDCDVIQADGGTRVASITGAFIAVADAMIKLTESGKVRQNPLKDYVAAISTGIVGNEVVLDLNFKEDSSAKVDMNLVMTGSGNFVEVQATGEEYSFTQQEFDKMLEYGKLGINKLIHIQKKFIEGMPSIGHWKRLSIKEFSYTDTGGN
SIO_010081: PERMA_RS01275
subclass of: SO_0000673
so part of: PERMA_RS01275
location: 233434..234219
location: region:233434-234219:1
so has part: feature:233434-234219:1:exon

WP_012676856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233434-234219:1:exon

PERMA_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01280
old locus tag: PERMA_0260
so part of: sequence
location: 234219..235517
location: region:234219-235517:1
so has part: feature:234219-235517:1:exon
subclass of: SO_0000010

position:235517:1
position: 235517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234219-235517:1:exon

PERMA_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01280
old locus tag: PERMA_0260
EC number: 6.3.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008286159.1
GO function: GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylosuccinate synthase
translation: MNKSLVILGSQWGDEGKGKIVDLLAPDYDYVVRYQGGSNAGHTVIVGNKKYALHLIPSGILHEGKKNLITNGVVIALEELINEMEKVREVAGDFEGKLYISDRAHIVFPHHKILDGLAERSKGKDKVGTTLKGIGPAYMSKYARTGIRIADLYDPAYFRHRLESSMNEAKEIAEKIYGVSFDLSINKIYFETLRMFEKIEYLVADTALMLDKALREGKRVLFEGAQGTMLDIDMGTYPYVTSSNSSALGLSNGTGVSPKLIGQAKVYGVSKAYVTRVGAGPFPTELNDGFGQKLRDEGHEYGTTTGRPRRCGWLDLVALRFAARINGMDGIIITKLDVLDHFEEIKVAVAYEYEGKEIRDFPASLKVLEKCRPVYKTLKGWHTSTKGLKDKEKLPDEAWEFIRFVEKETGTPVVMLSTGPERSEYIWIKQEG
SIO_010081: PERMA_RS01280
subclass of: SO_0000673
so part of: PERMA_RS01280
location: 234219..235517
location: region:234219-235517:1
so has part: feature:234219-235517:1:exon

WP_012676514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234219-235517:1:exon

PERMA_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01285
old locus tag: PERMA_0261
so part of: sequence
location: 235520..235783
location: region:235520-235783:1
so has part: feature:235520-235783:1:exon
subclass of: SO_0000010

position:235520:1
position: 235520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235783:1
position: 235783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235520-235783:1:exon

PERMA_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01285
old locus tag: PERMA_0261
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTPNDILAEVGNMHASDILLLIILIIGAGFLTYFILLKINAKRPPEKRRSSIALFLISLNVSFFVVVTFFVYKVLLAGLKYLMSNG
SIO_010081: PERMA_RS01285
subclass of: SO_0000673
so part of: PERMA_RS01285
location: 235520..235783
location: region:235520-235783:1
so has part: feature:235520-235783:1:exon

WP_012675642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235520-235783:1:exon

PERMA_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01290
old locus tag: PERMA_0262
so part of: sequence
location: 235780..237363
location: region:235780-237363:1
so has part: feature:235780-237363:1:exon
subclass of: SO_0000010

position:235780:1
position: 235780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237363:1
position: 237363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235780-237363:1:exon

PERMA_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01290
old locus tag: PERMA_0262
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMEILDKHLEDTSKVDKVVERSVDFLKKEIQSFRDLESFLKDSGNFLVIRRSCVEFVRREFKDLNKWETRKAVSEIFKKLDFKIDQQNLDKLVFLFFTDAVCETSPTPSPLVFDYNGNIFVKRHSIAIDFDLVPFLMESIENLNSVKKHQAVFKIYPEDQLVTKGISKHVSDLNFLILDLLEKVLYEEVIPFDTVVIHKGKELKPDLDILKLGIESVFSGITEYFLGEKEILKTGILNKKQSSIFVKVKNYVIDQLKDKDELEYLLFTSDADEESTEGRIFTVLDYTNQKNVFEESLKREDATVNDRIESIFWLLGIDNINITLLVMYFDTDDIVYYILELLRQAQDEGFLTERFKRSVKSFLENLFQYPYISKGFMNQKTLDKAMRILFEDDKKLMADYSYYTKRYDQFLEITKDIQDKDPYTQLRQLTARYLKGDISKEDYKNWLILIPSGEAHFLYNLFSDSLDSLPYDNEYRILVDIYKKGEFVEEGKDPSEEEKIYTMILRVLGVYPEEERLKKLLNLRYEA
SIO_010081: PERMA_RS01290
subclass of: SO_0000673
so part of: PERMA_RS01290
location: 235780..237363
location: region:235780-237363:1
so has part: feature:235780-237363:1:exon

WP_148206393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:235780-237363:1:exon

PERMA_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01295
old locus tag: PERMA_0263
so part of: sequence
location: 237360..237737
location: region:237360-237737:1
so has part: feature:237360-237737:1:exon
subclass of: SO_0000010

position:237360:1
position: 237360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237737:1
position: 237737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237360-237737:1:exon

PERMA_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01295
old locus tag: PERMA_0263
inference: COORDINATES: protein motif:HMM:NF017020.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MREDLITLAERELNEVATLLNESFCDDGLVFHHLRNGVLYLLKALAEEYNLDYEGIESISDLVALIERKTTVKFPEYMQSIIDLEDIMVPDDCTTSICYDPEMYGDILDAVENLKEFVEKEIESL
SIO_010081: PERMA_RS01295
subclass of: SO_0000673
so part of: PERMA_RS01295
location: 237360..237737
location: region:237360-237737:1
so has part: feature:237360-237737:1:exon

WP_015898960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237360-237737:1:exon

PERMA_RS01300
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01300
old locus tag: PERMA_0264
so part of: sequence
location: 237734..239320
location: region:237734-239320:1
so has part: feature:237734-239320:1:exon
subclass of: SO_0000010

position:237734:1
position: 237734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239320:1
position: 239320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237734-239320:1:exon

PERMA_RS01300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01300
old locus tag: PERMA_0264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674280.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
translation: MKILKASEMAYADENTIKLTGIPSLVLMENAGRTASQIILERYPDKKYFVVVAGSGNNGGDGLVIARYLLRYNRDVKVFILSDSRQKLSQDNLKNLEIFESFGGEVLFINKENTGKIRNPVKEADVVIDAIFGTGFKPPVKGFREKVIQIINRYAKNVVAVDIPSGLSTDTGRIEGVHTRADLTVTFAYPKPAHILYPACELCGEVFVVDISIDDSYLKEIHRYLLTYESIKLPERKKNSHKYTYGHLLVVGGSVGKTGAVIMASRSATASGSGLVTAVVPGSLDQVFENALTEEMTIPVDDIDGYFGKKAYRQIKEIIKNGKFTSVVAGMGMSVTENCISVIDQLLKGKMPLVIDADGINNLVLVDNFKEKLKKRKHPTVLTPHIGEMSRLTGLKTKEILDSMEETALSFSKETGSFVILKGSRTVISTPDGKVYYSIKGNEGMATAGTGDILSGITGTLVFRLGAEEGVKTAVYLHGLSGDLAVKETGVESMKATDLIRFIPEAYREIKRMKERKDTGFYRTLSSV
SIO_010081: PERMA_RS01300
subclass of: SO_0000673
so part of: PERMA_RS01300
location: 237734..239320
location: region:237734-239320:1
so has part: feature:237734-239320:1:exon

WP_012676463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237734-239320:1:exon

PERMA_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01305
old locus tag: PERMA_0265
so part of: sequence
location: 239358..240734
location: region:239358-240734:1
so has part: feature:239358-240734:1:exon
subclass of: SO_0000010

position:239358:1
position: 239358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240734:1
position: 240734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239358-240734:1:exon

PERMA_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01305
old locus tag: PERMA_0265
EC number: 4.1.2.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546974.1
GO function: GO:0016832 - aldehyde-lyase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class II fructose-bisphosphate aldolase
translation: MPVIAKSKEELINIISESVSVEGDLVNIKDEKKLRDKTIDDLIYTAVFSEDEGTKEEAKRIIRETANQFGAVAASIHDFYMAIGRGEVDNLTTPAVNIRGMTYDVARQIFRVANKHNVGAFIFEIAKSEIGYTFQRPSEYASCVLAAAIKEGYKGPVFIQGDHFQFNAKKYAEDPEKELQAIKDLTEEAIKAGFYNIDIDPSTLVDYSKPSLKEQQYHNYINTAKMTQFIRDIEPEGVTVSIGAEIGHIGGKNSTVEEFEAFMEGYLSEIPEGMAGISKMSVQTGTEHGGIPLPDGTVAEVKLDFNVLKDIGKVAREKYGLGGTVQHGASTLPDELFDKFPESNCCEIHLATGFQNIMYDLIPEDFRNEIYEYIKENFKNEWKEGQTEQQFIYKTRKKGFGPFKYQWWTLEDQYKNRILEALYNKFEFLFDKLNVFNTKESVEKYVKPVKISYGSVKG
SIO_010081: PERMA_RS01305
subclass of: SO_0000673
so part of: PERMA_RS01305
location: 239358..240734
location: region:239358-240734:1
so has part: feature:239358-240734:1:exon

WP_012676805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239358-240734:1:exon

PERMA_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01310
old locus tag: PERMA_0266
so part of: sequence
location: 240740..241249
location: region:240740-241249:1
so has part: feature:240740-241249:1:exon
subclass of: SO_0000010

position:240740:1
position: 240740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241249:1
position: 241249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240740-241249:1:exon

PERMA_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01310
old locus tag: PERMA_0266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288337.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-carboxyhexanoate--CoA ligase
translation: MSQLDSQINAIKEIYREIKKAGSRIQPVVVGKFALTVYTQGMYPAGNISLLFPDLNLLKKVLKELGYQSMGDFWVRGDIAVEVSRKFEIIPFGTFNRIEVDGEIINVISVEDLLIDMMNECIAGDENVCNLIKMLVRSYGKAIDFHYIFQHIKNKKALIKFKEFKKDLN
SIO_010081: PERMA_RS01310
subclass of: SO_0000673
so part of: PERMA_RS01310
location: 240740..241249
location: region:240740-241249:1
so has part: feature:240740-241249:1:exon

WP_012676594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240740-241249:1:exon

PERMA_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: fbp
locus tag: PERMA_RS01315
old locus tag: PERMA_0268
so part of: sequence
location: 241261..242226
location: region:241261-242226:1
so has part: feature:241261-242226:1:exon
subclass of: SO_0000010

position:241261:1
position: 241261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242226:1
position: 242226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241261-242226:1:exon

PERMA_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: fbp
locus tag: PERMA_RS01315
old locus tag: PERMA_0268
EC number: 3.1.3.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676407.1
GO function: GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class 1 fructose-bisphosphatase
translation: MAEKGMDLNRFILEEERKHPSASGSLSLALMAIESAAKIIASHVRMAGLADVLGQAGKVNVQGEEVQKLDELSNTVMLQHLLDSGQFYALASEELNEPVYSHKGKDARYVIAFDPLDGSSNIDVNVSIGTIFSIHRRIGDGIENFLQEGYKQVAAGYIIYGSSVMFVLTTGNGVNGFTYDPAVGMFLLSHPDIKIPEKGKIYSINEANAHKWTDEGLVRYIDKLKEEGYTSRYIGSMVADVHRTLIKGGMFGYPADRKNKSGKLRLLYEAAPMAYIIKQAGGKSTTGKMDILDVKPEDIHQRVPVFIGSRKEIDQLLEFIS
SIO_010081: PERMA_RS01315
subclass of: SO_0000673
so part of: PERMA_RS01315
location: 241261..242226
location: region:241261-242226:1
so has part: feature:241261-242226:1:exon

WP_012676407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241261-242226:1:exon

PERMA_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01320
old locus tag: PERMA_0267
so part of: sequence
location: complement(242216..244015)
location: region:242216-244015:-1
so has part: feature:242216-244015:-1:exon
subclass of: SO_0000010

position:242216:-1
position: 242216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244015:-1
position: 244015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242216-244015:-1:exon

PERMA_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01320
old locus tag: PERMA_0267
EC number: 3.1.4.52
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing phosphodiesterase
translation: MLKAISECIKEGFELEDVKVVSRGKGDILNKYSDYKKIPVLNQYFLLIKGDISYKKQHLIKKSLEDILKSLQNSSHKVKKLSILEKELETILRANEIFFSGEGSLEDFFLFLKNKKYAVVENNKVILNTGIDKFSITTSLGKLKKVDEFSTSFGKGETYALKTGMYQIIVQSEKEPLDPFLKKVLKSRLLWLNKIYYEKYQYSVDELTGLFTRKKFLNDLPKFKNRSCLLINLKNFRFINEIYSPQVGDKVLQEFAILLKKKSLSENVYRIFGDKFAIVFNNEDQSINFYRNIVKFLQSGIKVFHEVLNEYVTVNVQVKFIIIKKIDSNFLERAMIAFKKTAYQEKDLIIYEDTILPQMEKELKSIEVIQKAIENDKVIPAFQKIVNLNTGSEYYEALMRIKSGRKVYLPGDFLTPAKETGLYPKLSNIMFDKVVEAIKNTGYKISINIEITDILRKNFIDYTIKKIKRSGVSPDKIILELTETEDMSRMIRYAQDILQTLKREGFYISIDDFGSGYSNFSYLTKLPVDIIKIDGSLIKNLEKSRKNLLIVKSIISMSKLLGIETVAEFVNSREIYQIVENLGVDYVQGFYIDKPKFKI
SIO_010081: PERMA_RS01320
subclass of: SO_0000673
so part of: PERMA_RS01320
location: complement(242216..244015)
location: region:242216-244015:-1
so has part: feature:242216-244015:-1:exon

WP_012675461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242216-244015:-1:exon

PERMA_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01325
old locus tag: PERMA_0269
so part of: sequence
location: complement(244009..245052)
location: region:244009-245052:-1
so has part: feature:244009-245052:-1:exon
subclass of: SO_0000010

position:244009:-1
position: 244009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245052:-1
position: 245052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244009-245052:-1:exon

PERMA_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01325
old locus tag: PERMA_0269
inference: COORDINATES: protein motif:HMM:NF019845.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alcohol dehydrogenase catalytic domain-containing protein
translation: MLALRFYNQRDIRLEKLPKPKPKKEEVLIKVTQAGISQTQINEFIEGPFFINKEPHPLTGKAIPLIPCQEYGGIIEDVGKGVDRSLIGKQVAVLPLISCGKCEHCLKGKENLCEKMAYHGLLGLDGGFAEYSVVNVKNIFPVEKEELLTFIEPILVGMNTFDIYRHYNGKEDFKEKKILILGAGPVGISVGAVWRDYVKADVVINDILSYRMKKAKEVGFRTVEKKELKKNSFDIVIDAAGMDPLSTQSAIVEGIDYIKKGGFLISVGSYFHPVEFIPSELTFNEKNIISSMAYSLKLIDELPEVLKSLRINFKTLIQEITLEKIIEEGYYRAEVEKESFVRIVVRC
SIO_010081: PERMA_RS01325
subclass of: SO_0000673
so part of: PERMA_RS01325
location: complement(244009..245052)
location: region:244009-245052:-1
so has part: feature:244009-245052:-1:exon

WP_012675315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244009-245052:-1:exon

PERMA_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: crcB
locus tag: PERMA_RS01330
old locus tag: PERMA_0270
so part of: sequence
location: 245154..245528
location: region:245154-245528:1
so has part: feature:245154-245528:1:exon
subclass of: SO_0000010

position:245154:1
position: 245154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245528:1
position: 245528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245154-245528:1:exon

PERMA_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: crcB
locus tag: PERMA_RS01330
old locus tag: PERMA_0270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288866.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO process: GO:1903424 - fluoride transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fluoride efflux transporter CrcB
translation: MEYIYVMIGGSLGAVSRFFISNYVNRNLPLDFPAGTLVVNSLGSFILVFFLILSIEKLSIDPVWRLFFAVGFLGAFTTFSTFSYETIALFQDGEYTKAMLNIILNNVVSITAGISGLFLARVIG
SIO_010081: PERMA_RS01330
subclass of: SO_0000673
so part of: PERMA_RS01330
location: 245154..245528
location: region:245154-245528:1
so has part: feature:245154-245528:1:exon

WP_015899036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245154-245528:1:exon

PERMA_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01335
old locus tag: PERMA_0271
so part of: sequence
location: 245538..245864
location: region:245538-245864:1
so has part: feature:245538-245864:1:exon
subclass of: SO_0000010

position:245538:1
position: 245538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245864:1
position: 245864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245538-245864:1:exon

PERMA_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01335
old locus tag: PERMA_0271
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288865.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF190 domain-containing protein
translation: MKIEGEALLLRIFIGESDRVEGKLLYRKIVEILRENDIAGATVIRGIMGYGASSRIHTASILTLSGDLPVVIEAVDKEEKIKRVIPIIEKFITKGLITLEKVNVIKYI
SIO_010081: PERMA_RS01335
subclass of: SO_0000673
so part of: PERMA_RS01335
location: 245538..245864
location: region:245538-245864:1
so has part: feature:245538-245864:1:exon

WP_012675800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245538-245864:1:exon

PERMA_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01340
old locus tag: PERMA_0272
so part of: sequence
location: 245934..246512
location: region:245934-246512:1
so has part: feature:245934-246512:1:exon
subclass of: SO_0000010

position:245934:1
position: 245934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246512:1
position: 246512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245934-246512:1:exon

PERMA_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01340
old locus tag: PERMA_0272
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYIGINISGRNLFTVAVIEEDGKISSINHFWKEGLYWFLEHSKVKVAVLNLNFRERGSDLKFRYLTDLMNVLLESFEFEQMEVKKVYENGRFVGVTDTDLFFEQAVSRDLLPVETREGVEQRIYTLSKAGIYVDENLFSTDMERLRSEVNAVVSSYTALSVEMGNYSFKEIEGIEVLVPEYRYVPKAERKYL
SIO_010081: PERMA_RS01340
subclass of: SO_0000673
so part of: PERMA_RS01340
location: 245934..246512
location: region:245934-246512:1
so has part: feature:245934-246512:1:exon

WP_012676924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245934-246512:1:exon

PERMA_RS10725
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10725
so part of: sequence
location: 246605..246862
location: region:246605-246862:1
so has part: feature:246605-246862:1:exon
subclass of: SO_0000010

position:246605:1
position: 246605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246862:1
position: 246862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246605-246862:1:exon

PERMA_RS10725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10725
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRQIILFLFLIPSFLYADDLCDFVGKLVVECYHKREKGELKSCNVKIYEIPALNRACQVGCLSESLYEANLSSELLKSECESGYF
SIO_010081: PERMA_RS10725
subclass of: SO_0000673
so part of: PERMA_RS10725
location: 246605..246862
location: region:246605-246862:1
so has part: feature:246605-246862:1:exon

WP_041530854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246605-246862:1:exon

PERMA_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01350
old locus tag: PERMA_0273
so part of: sequence
location: 246992..247450
location: region:246992-247450:1
so has part: feature:246992-247450:1:exon
subclass of: SO_0000010

position:246992:1
position: 246992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247450:1
position: 247450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246992-247450:1:exon

PERMA_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01350
old locus tag: PERMA_0273
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hsp20/alpha crystallin family protein
translation: MERRNIPATFTWNPFRELARIEHELNKIFNELVPSTVKGEVVEVRTWNPRVDIYEKDDKLVIEAEIPGAKKEDIEVKIKDNSVIIRGEVKKEEEKKEENYYRSERFYGKFERVIPLPVEIKAEDAKATIEDGILKLEIPKATTEKEVKIEVK
SIO_010081: PERMA_RS01350
subclass of: SO_0000673
so part of: PERMA_RS01350
location: 246992..247450
location: region:246992-247450:1
so has part: feature:246992-247450:1:exon

WP_012675552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246992-247450:1:exon

PERMA_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01355
old locus tag: PERMA_0274
so part of: sequence
location: 247499..247774
location: region:247499-247774:1
so has part: feature:247499-247774:1:exon
subclass of: SO_0000010

position:247499:1
position: 247499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247774:1
position: 247774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247499-247774:1:exon

PERMA_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01355
old locus tag: PERMA_0274
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKIYSYDETESSIVIEVGSREGIRLASSILSKINEDLFVDWEYVLEEINERVNGGIADKKIHISIIPRKDKDSLVIVSLQHEEVMAIIPS
SIO_010081: PERMA_RS01355
subclass of: SO_0000673
so part of: PERMA_RS01355
location: 247499..247774
location: region:247499-247774:1
so has part: feature:247499-247774:1:exon

WP_012676932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247499-247774:1:exon

PERMA_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: trpE
locus tag: PERMA_RS01360
old locus tag: PERMA_0276
so part of: sequence
location: 247812..249302
location: region:247812-249302:1
so has part: feature:247812-249302:1:exon
subclass of: SO_0000010

position:247812:1
position: 247812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249302:1
position: 249302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247812-249302:1:exon

PERMA_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: trpE
locus tag: PERMA_RS01360
old locus tag: PERMA_0276
EC number: 4.1.3.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459918.1
GO function: GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO process: GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anthranilate synthase component I
translation: MSVNLTFPEFEKLSEKYNVIPLYKEILFDLDTPLSVFAKLKSEDRFNFLLESVEKGENVGRYSFIGSSLPVYIRTKKNYVEYYDNGRISYSYTEDPIDELKRFLAKFKPADLPDLPPFWGGLVGYLAYDVIHFYEPVPDEKPDTLNLPDLFFFLSDEIIAFDNVNNSIKIIVSAIIDGDRSLREVYDESIRKIEEIEDRLSSEVKIKRISLKEKKDVDIKRWRSNFKKEDFLKAVEKCKFYIKEGDIIQVVISQRFHKKLRTDPINVYRAVRAINPSPYLFYLDFRDIKLIGSSPEILVSVKDGKILTKPIAGTRPRGKTAEEDKKLSEELLNDEKERAEHLMLVDLARNDVGKVSKSGTVKVDRFMYIEYYSHVMHIVSDVSGQLREDLHPLDVLKSVFPVGTVSGAPKVRAMQIIEEIEPEKRGPYAGAVGYISFNGNLDTAIAIRTAVVRKDDVYIQAGAGIVADSVPEREYEETVNKAKAMMKAVELAEEED
SIO_010081: PERMA_RS01360
subclass of: SO_0000673
so part of: PERMA_RS01360
location: 247812..249302
location: region:247812-249302:1
so has part: feature:247812-249302:1:exon

WP_012675821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247812-249302:1:exon

PERMA_RS01365
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: dapE
locus tag: PERMA_RS01365
old locus tag: PERMA_0275
so part of: sequence
location: complement(249299..250360)
location: region:249299-250360:-1
so has part: feature:249299-250360:-1:exon
subclass of: SO_0000010

position:249299:-1
position: 249299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250360:-1
position: 250360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249299-250360:-1:exon

PERMA_RS01365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: dapE
locus tag: PERMA_RS01365
old locus tag: PERMA_0275
EC number: 3.5.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674145.1
GO function: GO:0009014 - succinyl-diaminopimelate desuccinylase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: succinyl-diaminopimelate desuccinylase
translation: MREKLKDYLTDLVNIPSVTGNERDIADYVENFLKKLFPEENIIRYNNSIIAFDSINPDKKTISFIGHLDTVPGENEFTGKIIDNRLYGLGASDMKGGLAVMMALAEYFKDRDKRFNCIYVFYEREEGPYDENGLEPLLRNFSIIQRSDLAVVLEPTNNNIQVGCLGTMHASVIFKGKRAHSARPWQGENAIHRSADFLKRLSELKWKEYTFGGLKFVEVMNATMVDYSGGRNIIPDRFVINVNYRFAPGKSIEEAKKDVLDLVKGEAEVQFTDLCPSGKVCLDNPVLQELINRFSLKVEAKQAWTDVARLSLYGVDAVNFGPGDPAQAHQKNEYIPLKNLYENFDILRDFLEG
SIO_010081: PERMA_RS01365
subclass of: SO_0000673
so part of: PERMA_RS01365
location: complement(249299..250360)
location: region:249299-250360:-1
so has part: feature:249299-250360:-1:exon

WP_012675402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:249299-250360:-1:exon

PERMA_RS01370
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01370
old locus tag: PERMA_0277
so part of: sequence
location: complement(250357..251142)
location: region:250357-251142:-1
so has part: feature:250357-251142:-1:exon
subclass of: SO_0000010

position:250357:-1
position: 250357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251142:-1
position: 251142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250357-251142:-1:exon

PERMA_RS01370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01370
old locus tag: PERMA_0277
inference: COORDINATES: protein motif:HMM:NF013757.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MYRKREKTEYIVHNVDLAFDILFFLAKYPESKLQEIESRIEGSHYQIEKIIEVLINRGYIDFNKKKKTYSLGIKNFEVGYSYISHVEIRKLAKPYLQYLGEKFQENVYLALRSGFEIVYIDSYEVNRSVLVRSRVGRLLPMYASASGKIHLAEMDQDELEEFFKEVKLIPYTNKTITDKNLLLEHIKKVKEQGYAIDDEEWEEEVKCLSVPVRNHTGKVAAALTLSAPSYRVPKERLITEVKDEFIKKASELSEKLGYSKE
SIO_010081: PERMA_RS01370
subclass of: SO_0000673
so part of: PERMA_RS01370
location: complement(250357..251142)
location: region:250357-251142:-1
so has part: feature:250357-251142:-1:exon

WP_012676772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250357-251142:-1:exon

PERMA_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01375
old locus tag: PERMA_0278
so part of: sequence
location: complement(251165..251243)
location: region:251165-251243:-1
so has part: feature:251165-251243:-1:exon
subclass of: SO_0000663

position:251165:-1
position: 251165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251243:-1
position: 251243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251165-251243:-1:exon

PERMA_RS01375
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 123214
locus tag: PERMA_RS01375
old locus tag: PERMA_0278
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(251205..251207),aa:Asp,seq:gtc)
SIO_010081: PERMA_RS01375
subclass of: SO_0000673
so part of: PERMA_RS01375
location: complement(251165..251243)
location: region:251165-251243:-1
so has part: feature:251165-251243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251165-251243:-1:exon

PERMA_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01380
old locus tag: PERMA_0279
so part of: sequence
location: complement(251252..251325)
location: region:251252-251325:-1
so has part: feature:251252-251325:-1:exon
subclass of: SO_0000663

position:251252:-1
position: 251252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251325:-1
position: 251325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251252-251325:-1:exon

PERMA_RS01380
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 123214
locus tag: PERMA_RS01380
old locus tag: PERMA_0279
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(251289..251291),aa:Val,seq:tac)
SIO_010081: PERMA_RS01380
subclass of: SO_0000673
so part of: PERMA_RS01380
location: complement(251252..251325)
location: region:251252-251325:-1
so has part: feature:251252-251325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251252-251325:-1:exon

PERMA_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01385
old locus tag: PERMA_0280
so part of: sequence
location: complement(251356..252171)
location: region:251356-252171:-1
so has part: feature:251356-252171:-1:exon
subclass of: SO_0000010

position:251356:-1
position: 251356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252171:-1
position: 252171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251356-252171:-1:exon

PERMA_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01385
old locus tag: PERMA_0280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880991.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MKLKDIIKDSLNRLFEIETEDHFTVESVYYRGDTLCVSSQLGCPVRCSFCASGMNGLIRNLSYDEIIDQYRIAVSEGMEIKNIAFAGIGEPLLNWENVKKAFYHFKDIGLKASFYTTGFPLKNFKELLELPHNGVSLSLHAVTDEKRKQLIPYGQPLDQILDVFKDHLSKLSRRKRKMYSIAYLLIGGVNDSEEEIQKLSQIARDLQVGVSLLKYNEIDGIDYRSTSDEEYERVFLQLRENGIRVTLSNRYRTRKIGGCGTLMINRTVLTK
SIO_010081: PERMA_RS01385
subclass of: SO_0000673
so part of: PERMA_RS01385
location: complement(251356..252171)
location: region:251356-252171:-1
so has part: feature:251356-252171:-1:exon

WP_012676674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251356-252171:-1:exon

PERMA_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: alaS
locus tag: PERMA_RS01390
old locus tag: PERMA_0281
so part of: sequence
location: 252260..254896
location: region:252260-254896:1
so has part: feature:252260-254896:1:exon
subclass of: SO_0000010

position:252260:1
position: 252260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254896:1
position: 254896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252260-254896:1:exon

PERMA_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: alaS
locus tag: PERMA_RS01390
old locus tag: PERMA_0281
EC number: 6.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458881.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--tRNA ligase
translation: MKFLTANQIRESFLRYFEERGHTRVKSASIIPETDPTLLFVNAGMVPFKNVFLGLEEKPYKRAVSCQKVFRVSGKHNDLDNVGYTPRHHTFFEMLGNFSFGDYFKREAIQFAWEYLTEVLEIPEEKLLVSVFEEDDEAFEIWNKVIGLPEEKIHRLGVEDNFWSMGETGPCGPCSEIYYDRGEAFGNPELGSPEDIRYLEVWNLVFMQYNRDKDGRLTPLPKPNIDTGMGLERIASVLQGVNSNYETDLFMPLIEFAQSVSGKSYDPEDPGSENTVAMRVIADHLRAITFLISDGVFPSNEGRGYVLRRILRRALRYGMELGIERPFLFEGVDVVVDIMKEPYPELIGNRSFIKNLVKSEEEKFIKTLRKGLEILYDIIQKAKKEGRNHITGKEAFLLYDTYGFPVDLLEDIARDNGFGVDIAEYYKLLEEQKERARASWKSQAKEIKPVYLELKNKLPENVFVGYERLEVDDAQILSVLKEDREVDTLHEGETGEIVLDVTPFYPEKGGQVGDRGIIEGDGFLFDVVDTQTPVEGIIVHRGKVIHGTVKKGETVSAKVDKDTRLDIMRHHTATHLLHAALRNLLGDHVKQAGSLVHPDYLRFDFTHFESLTDEDIKRVEELVNEEIMKNEPVICKEMPYDEAIKSGAIAIFDEKYGDTVRVISAGISTELCGGTHVSRTGDIGYFKIISETAVASGTRRIEAVAGRKAVERGLREHFLIENVKRALTAKEDEIIDKIETLKLKLKEAQREIENIKKKSVVDRITDILTVEEKEGIKIAYGSVEGLQPNDLRDLADVARSKLGRSVVMIASVDKEKNKVNFIVAVSKDLTDRIKAGEIVKKVAPALGGKGGGRPDMAQGGGTEPSKLKEAFNIFRKEI
SIO_010081: PERMA_RS01390
subclass of: SO_0000673
so part of: PERMA_RS01390
location: 252260..254896
location: region:252260-254896:1
so has part: feature:252260-254896:1:exon

WP_012675483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252260-254896:1:exon

PERMA_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01395
old locus tag: PERMA_0282
so part of: sequence
location: 254935..255363
location: region:254935-255363:1
so has part: feature:254935-255363:1:exon
subclass of: SO_0000010

position:254935:1
position: 254935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255363:1
position: 255363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254935-255363:1:exon

PERMA_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01395
old locus tag: PERMA_0282
inference: COORDINATES: protein motif:HMM:NF015444.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF296 domain-containing protein
translation: MNYKKIDDIYLLCLQEGERVIGSIERFVETEGIISGFFWAVGAIRNVELGIFDIEEKDYIKAIFKDYYEIVSCHGNISVDPESKKPVIHTHISIADKNFKLFGGHLFEAEVTVTFEMILLPVTVPIHRNINQKFNLKLWKVI
SIO_010081: PERMA_RS01395
subclass of: SO_0000673
so part of: PERMA_RS01395
location: 254935..255363
location: region:254935-255363:1
so has part: feature:254935-255363:1:exon

WP_012675295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254935-255363:1:exon

PERMA_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01400
old locus tag: PERMA_0283
so part of: sequence
location: complement(255367..255888)
location: region:255367-255888:-1
so has part: feature:255367-255888:-1:exon
subclass of: SO_0000010

position:255367:-1
position: 255367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255888:-1
position: 255888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255367-255888:-1:exon

PERMA_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01400
old locus tag: PERMA_0283
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288352.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YqhA family protein
translation: MGLIEKIIERLLWESRLMIFLAVVASIFAAFVLVLIGTFEIVYVLKGSVKLFGEKEVFEDFYKYAIKHIVTAVDIYLIATVLLIFGIGLYELFISKIDYIEQEEKSSKILEIHTLDQLKEKLAKVILMVLIVTFFKYAIDFQYKDIKSLLFLSMGIFLVSLSIYMMHKGKDKK
SIO_010081: PERMA_RS01400
subclass of: SO_0000673
so part of: PERMA_RS01400
location: complement(255367..255888)
location: region:255367-255888:-1
so has part: feature:255367-255888:-1:exon

WP_015898906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255367-255888:-1:exon

PERMA_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ccsA
locus tag: PERMA_RS01405
old locus tag: PERMA_0285
so part of: sequence
location: 255989..256789
location: region:255989-256789:1
so has part: feature:255989-256789:1:exon
subclass of: SO_0000010

position:255989:1
position: 255989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256789:1
position: 256789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255989-256789:1:exon

PERMA_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ccsA
locus tag: PERMA_RS01405
old locus tag: PERMA_0285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459153.1
GO function: GO:0020037 - heme binding [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein CcsA
translation: MLKIILVASLMSYFLSSLVFWMYIFTKKKIGERVGFSFFGIGFLLQLLYIGIRDIQEKSFAVATAKELPFFLAFLLAVVFYGLSLKYKKQLRDFGSIFAPINVFLIAMTLPNVGTDQQLYKNFWFYAHVILSMMAYAFIIAAAVVAFVYILTERDLKKKKLDSFLVSKFSSSLVLLQDIEYKSNVLAFITLSLALIASSVWSSVYLGKHWIWDLKQLALSFLWIYYGFIIHIMVIKHEKGKKASYLTVLGGFFAFIIYWFVKHPIY
SIO_010081: PERMA_RS01405
subclass of: SO_0000673
so part of: PERMA_RS01405
location: 255989..256789
location: region:255989-256789:1
so has part: feature:255989-256789:1:exon

WP_012676295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255989-256789:1:exon

PERMA_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: pyrE
locus tag: PERMA_RS01410
old locus tag: PERMA_0284
so part of: sequence
location: complement(256779..257330)
location: region:256779-257330:-1
so has part: feature:256779-257330:-1:exon
subclass of: SO_0000010

position:256779:-1
position: 256779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257330:-1
position: 257330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256779-257330:-1:exon

PERMA_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: pyrE
locus tag: PERMA_RS01410
old locus tag: PERMA_0284
EC number: 2.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673873.1
GO function: GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: orotate phosphoribosyltransferase
translation: MDYRERLKEMINERALKVSDRPIFKLSSGKMSTYYMDLRTITLDPEGGFIIGNLIFEMIKDRNPDAVGGLTLGADPISYATALISYINRKPIKPFVVRKEPKGHGTGKQIEGNVKPGEKVFIVEDVVTTAGSSLKAAKVARDFGLEILGIIAIVDREEGGEENIRKEGFDFFPVFKISEFLNR
SIO_010081: PERMA_RS01410
subclass of: SO_0000673
so part of: PERMA_RS01410
location: complement(256779..257330)
location: region:256779-257330:-1
so has part: feature:256779-257330:-1:exon

WP_012675679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256779-257330:-1:exon

PERMA_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01415
old locus tag: PERMA_0286
so part of: sequence
location: complement(257341..258081)
location: region:257341-258081:-1
so has part: feature:257341-258081:-1:exon
subclass of: SO_0000010

position:257341:-1
position: 257341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258081:-1
position: 258081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257341-258081:-1:exon

PERMA_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01415
old locus tag: PERMA_0286
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008289276.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrilase-related carbon-nitrogen hydrolase
translation: MLVYALQVNLELGNTEKNIEKVFSYIKKVKKGSLVLLPEMFSCGFDNENLDIHVKETPSIYKQLKKISHEKHLVISGTLPEKSRSGIYNKAFVIDNGEIVYKQAKVKLFRPTGEHKYYRAGKNFDVTESSNGNLGIMICFELRFPNISYTLRKKGVEIILVPAQWGKPRKKHLEILSQARAIEDQAFVIVSNTTGRIGDIDYAGSSGIYDPWGEPLAFIDEEEGMIEADINLNDIYKIRRKIRMDI
SIO_010081: PERMA_RS01415
subclass of: SO_0000673
so part of: PERMA_RS01415
location: complement(257341..258081)
location: region:257341-258081:-1
so has part: feature:257341-258081:-1:exon

WP_012675530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257341-258081:-1:exon

PERMA_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: purL
locus tag: PERMA_RS01420
old locus tag: PERMA_0287
so part of: sequence
location: 258211..260466
location: region:258211-260466:1
so has part: feature:258211-260466:1:exon
subclass of: SO_0000010

position:258211:1
position: 258211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260466:1
position: 260466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258211-260466:1:exon

PERMA_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: purL
locus tag: PERMA_RS01420
old locus tag: PERMA_0287
EC number: 6.3.5.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458771.1
GO function: GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylformylglycinamidine synthase subunit PurL
translation: MEEKVLSAHGLTLDEYKRIVQLIGREPNEVELGIFGALWSEHCSYKSSKPFLKVFPTDAPWVIQGPGENAGVVEIDDKYAVAFKIESHNHPSYIEPFHGAATGVGGIIRDILSMGARPVCAFDSLRFGDVRNDGKRKSIKDAKPIVQGVVKGIGFYGNCIGVPTVGGEVVFDEVYAGNPLVNAFCLGILEKDKMFRARATKVGQKMVMVGSSTGRDGIHGATMASAEFSEESESKRPNVQIGDPFFGKRLIECTLEVMQKGLIVGCQDFGAAGFAGSTSEFGSKSGMGVRVYLENVPLREEGMTPYEILLSESQERMLYAVDEENVDQVIKIAKSYGLEAAVIGETTDTKRMEVFYKGEKVADLPISAIVDDAPVYNRPRKEPEYLKETRAFDQNSLPEVDIKEAIRTVLFSPTIAKKEWVYRQYDHEVGINTVVKPGSDAAVLRVRWAVKPEINSEKAVAISSDGNGRWVYLDPYEGGKRVVVEAVRNVYISGAKPLAITDCLNWGNPENPEIMWQFEQATKGMADACRQLNTPVISGNVSLYNETVLPDRRINIYPTPTVVAVGVLDRPEDAIPSFYQEEGDIVVLIGELDRNPTVNGSEYLKEVHGVVSGSIPPVNIEIEKKMMEFIHKNRDRIKSAHDVSDGGLITAILESAFGEERTFGLDIQIKTDHRPDFELFDEMRSIVVISASEEDIPYLEAKARELALGFKVVGVVKDSSYLDLKIGDLHITDSMEELRKGWENRLKDLLG
SIO_010081: PERMA_RS01420
subclass of: SO_0000673
so part of: PERMA_RS01420
location: 258211..260466
location: region:258211-260466:1
so has part: feature:258211-260466:1:exon

WP_012676381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258211-260466:1:exon

PERMA_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01425
old locus tag: PERMA_0288
so part of: sequence
location: 260634..261224
location: region:260634-261224:1
so has part: feature:260634-261224:1:exon
subclass of: SO_0000010

position:260634:1
position: 260634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261224:1
position: 261224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260634-261224:1:exon

PERMA_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01425
old locus tag: PERMA_0288
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: cytochrome c oxidase subunit II
translation: MVTSADVLWMLKIVYTIYAFAIISFIGWFGYRVTKKPDSNRTWLTPKVFYSYLGMLVVIGVGIHILTYNKVPWVAWELKKHKIQPDREINVHIKDHTFIIPEETPITIKCGEVVRFNVTSEDLTYGFGLFRENNSMVFQMQVVPQHRNVLLWKFTEERTFYVLSTEYSGPKGAYMKVPDAFKVVGCERLAMREGVR
SIO_010081: PERMA_RS01425
subclass of: SO_0000673
so part of: PERMA_RS01425
location: 260634..261224
location: region:260634-261224:1
so has part: feature:260634-261224:1:exon

WP_012676493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260634-261224:1:exon

PERMA_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01430
old locus tag: PERMA_0289
so part of: sequence
location: 261221..262882
location: region:261221-262882:1
so has part: feature:261221-262882:1:exon
subclass of: SO_0000010

position:261221:1
position: 261221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262882:1
position: 262882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261221-262882:1:exon

PERMA_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01430
old locus tag: PERMA_0289
inference: COORDINATES: protein motif:HMM:NF012343.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome c oxidase subunit I
translation: MSIKDILLKGYSGGLNHEGLSPLQKVTLRFVVIGLLFYGVAAIEGMIMRGYAVKPLPLIDESHYFSIMTAHPIVGIFGSTYLLVFGSFTFLVPYLMKKPIFSIKLANFTWLIMTVGTVLVWLSGFIYHYAPLYTIYWPLPVDFTQFSVAGGFMFVLGVAFIMIGTLAFIFNTYATVFHTPKGQKKQPVKPLLMSAFGIDGFLNIVNKIRGKEPYVKEPPLSLPIVAIFRGTVDTFLDALVILSAGLLILFYIGNEVFSWGLHYHAVDALLYKNIFWWGLDLIADGLVLIYVAGTWYLLAMIISGRNLFMQNIARAALLLELLVSWAVWSHHLLSDQPQPEIMKLASGEMITAFELITQGLAFFITLTTLWLARPLKMSNELKFLLGGLLGFALAVPAGIIQADLGMNRLLHNTQWVAGAHFHVAILVGLTMTLYSAIYVLFPILTNNSVKLYSQKLANWHFWLHLIGGIGMGAFMGMAGIDGMLRRHIYTEGEYMIYMIPAAVFGFMLILAWVLFMFNIVATIGLKGLIGIFRPSSIDRDVVVPETAAAVQKG
SIO_010081: PERMA_RS01430
subclass of: SO_0000673
so part of: PERMA_RS01430
location: 261221..262882
location: region:261221-262882:1
so has part: feature:261221-262882:1:exon

WP_012675288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261221-262882:1:exon

PERMA_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01435
old locus tag: PERMA_0290
so part of: sequence
location: 262885..263475
location: region:262885-263475:1
so has part: feature:262885-263475:1:exon
subclass of: SO_0000010

position:262885:1
position: 262885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263475:1
position: 263475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262885-263475:1:exon

PERMA_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01435
old locus tag: PERMA_0290
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLDIQKAARLIKEDGLYTFIYNEMKELSGKEGLTVEEILHLLNENPKFLDDYKTLNSQSEISNIQIREQIINKDDSEECKSIKKKINENRRKLLSLEAYGNEPDSMLYAVWIGSAVIFTIFVIHNLVVLYTYWYENHPFYVYLFYLFSVISGFLFYRKKIRDHHRLHKKFREIEKETKTLIEKGKEKGCIDKIYTD
SIO_010081: PERMA_RS01435
subclass of: SO_0000673
so part of: PERMA_RS01435
location: 262885..263475
location: region:262885-263475:1
so has part: feature:262885-263475:1:exon

WP_012676634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:262885-263475:1:exon

PERMA_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01440
old locus tag: PERMA_0291
so part of: sequence
location: 263536..264084
location: region:263536-264084:1
so has part: feature:263536-264084:1:exon
subclass of: SO_0000010

position:263536:1
position: 263536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264084:1
position: 264084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263536-264084:1:exon

PERMA_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01440
old locus tag: PERMA_0291
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIREDFKPVEDKIKKLLKIGEELKDLDQNVWPHLKNMEDFEKIYYMTVNEDIKRSFERLYEDGRLIAGQLWHTILSVNMDESYPDLYTFVRYLETGWINEENIRFLALELKKYQDNYNWILQNYGYGVKAVKDMIQLFERQIDLLQEIKSIIDQLKEEPLYRKREEKKSGIFGFFKRLWKG
SIO_010081: PERMA_RS01440
subclass of: SO_0000673
so part of: PERMA_RS01440
location: 263536..264084
location: region:263536-264084:1
so has part: feature:263536-264084:1:exon

WP_012675496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:263536-264084:1:exon

PERMA_RS01445
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01445
old locus tag: PERMA_0293
so part of: sequence
location: 264072..267137
location: region:264072-267137:1
so has part: feature:264072-267137:1:exon
subclass of: SO_0000010

position:264072:1
position: 264072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267137:1
position: 267137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264072-267137:1:exon

PERMA_RS01445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01445
old locus tag: PERMA_0293
inference: COORDINATES: protein motif:HMM:NF012789.2
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UvrD-helicase domain-containing protein
translation: MERINYIASAGTGKTYTLVEKIVDEYIIRKRINIDQVFVSTFTEKAASELKSRIYARIKEKIYENQKNPDQLKLLFSNFRNVQHSYIGTIHSLLLRILKANPDKSGITEDIKVIDDLQQEALFFESFEIFLEKNRERAGILANYFSGKNQIYTVFKNIYANLWKIERYRKESIEEREGYIKRLKEKALKLLDDFIKDHYRDFVDSQEFLKTDLKDIYTKIKQERFTQIKVEKNKNFPKLLKHKNVKNHRSLKSLDKEKVLELEDQLINTLEELRNNALYLNFLIILDNFDEFLQIFEEKKRENHLITYSDIILRSKEIFLRYPDLLEEYRERFKAFFIDEFQDTDQIQTDIIRMLSERSDLIVFGDPKQCIYEWRSADLYNYISFTEDFEERTLNVCYRSGPSLVGFFNLFFVENDFLNRDYSNRKVKELYHLEEKYIPELFYSSEKSLDITDPVEIVKTESDTEPVALAEKIKQLLNSGYSPEDILVLFRSRSKTDRYIQELRKSNIPFISFLSSNFYNSVEVITVLNILKLIQYPYDQLTLLKVLKSPVFSFSDKEIYQIRNDLYIDRIPQLKEIKRLEEIKDSLNISQILDRVYRDLPVLEIFSLYPDGKQKVANLEKLKFIADRLEGENFQLRDFIQFLEDNRYKDEEDALITTDDRFVKVMTMHRSKGLEAKVVIIPGLSERINRSTNGFFTVEDEIMVRIRDDYNREVARTLNFDEEKVKRKIYLEEKRLLYVAFTRAKERLILFYSGSKGYMNEIETVIERINGKEVTVYTQDRKPVSFKLEIKMTEPSGISNNIRYWSDIIKRQDRNIMEKLKLLKDEEEGRKEEFEKAVSAKIFTTVSALIDEKNEKSVVEEFQISEDDSLKERDIPVETGIIVHKILEYFSFPEDLKEAENEIEELFERFSGLITEDNRDKVRDISLEKLKRFIRSDAYKDISSSRIIFREMPFTLKEGGRYIEGKIDIVYEKNGVIYVGDYKTGRIKDEEKYRPQERYYTEVIKKIFPDREMKFRFIYLI
SIO_010081: PERMA_RS01445
subclass of: SO_0000673
so part of: PERMA_RS01445
location: 264072..267137
location: region:264072-267137:1
so has part: feature:264072-267137:1:exon

WP_012675759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264072-267137:1:exon

PERMA_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01450
old locus tag: PERMA_0292
so part of: sequence
location: complement(267125..268267)
location: region:267125-268267:-1
so has part: feature:267125-268267:-1:exon
subclass of: SO_0000010

position:267125:-1
position: 267125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268267:-1
position: 268267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267125-268267:-1:exon

PERMA_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01450
old locus tag: PERMA_0292
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFISKYSPLFFFLAFVNLIGSLVLRINGSDHIDTAIITAFGFVIYTLIGAGYQIIPNSQQRQIKYKHIQAVVFFLSVLSSIFLLTGQFLYASIFNLITVLIFTAHVSTVVHNIQPITVRFIISSVVYTNVASVFFLLSQITGNILLQTVLHTVTVGVLLNAVIGVELAWIPMMLMHSLNIRLGNIIFYLHQVTTVLLIGSFYFFDYRYILFAGIFETAVILAFFYVIFSAVKPSRSLMKVQPPIKYFLGGHLFLVIGLLMALHISASKMIQFIPVHMDAMMYGFAALTIFGGMLHLMPRIVWNMVHIKKAREGKEIPNVFQLIDYRKANLSFYIMTAGTLLMIALEFMMLPSFASVVYILASLYFFYILFVKMFIFYIR
SIO_010081: PERMA_RS01450
subclass of: SO_0000673
so part of: PERMA_RS01450
location: complement(267125..268267)
location: region:267125-268267:-1
so has part: feature:267125-268267:-1:exon

WP_012676810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267125-268267:-1:exon

PERMA_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01455
old locus tag: PERMA_0295
so part of: sequence
location: 268381..269739
location: region:268381-269739:1
so has part: feature:268381-269739:1:exon
subclass of: SO_0000010

position:268381:1
position: 268381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269739:1
position: 269739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268381-269739:1:exon

PERMA_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01455
old locus tag: PERMA_0295
inference: COORDINATES: protein motif:HMM:NF016995.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein ResB
translation: MNFFRSAFSKLFSIKLSIFLFIILSVSMAVGTFVENDFGTETALSLVYKSRWFEVLWLLLILNLTGGIFLYRLWREPSVLLIHLSFLLIFSGAVLTRYSGYEGTVHLREGEEKSYMISYDPYISFVIKKENQSIKYEERFYVSSAGGNFFSKRFNIGSSTLSIQLVDFLPVADIDLVERSDGAPVALLKIKERGKDFKKYPFKDGSSLKIGRVSLFFNKKPSVDEPYIHIYVKDNSFFIGSNYPFLVFDPQTAKKDKVKGYMRLEKGKLYAIGGLVISVEKILLSGDLHIKPVFKPVRGENDLSSLIFKVRYEGEEKFLYLLGRGISYRGIPDRINIKDVEIKGLWGSKEIKLPFSLYLEDFVMKRYPGSDKVSSYESHVILRDGNTEIPYVIYMNNPLKYRGYRIFQTSYDNDEKGSVLSVNYDPGLIPTYTGYAVLFLGLFINLLRRVKN
SIO_010081: PERMA_RS01455
subclass of: SO_0000673
so part of: PERMA_RS01455
location: 268381..269739
location: region:268381-269739:1
so has part: feature:268381-269739:1:exon

WP_012675522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268381-269739:1:exon

PERMA_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01460
old locus tag: PERMA_0294
so part of: sequence
location: complement(269736..270365)
location: region:269736-270365:-1
so has part: feature:269736-270365:-1:exon
subclass of: SO_0000010

position:269736:-1
position: 269736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270365:-1
position: 270365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269736-270365:-1:exon

PERMA_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01460
old locus tag: PERMA_0294
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MNLRDIYIFENLSDEHLKKIQKISFEREYERGDLLFYEGEEPENLYILTEGILRVYKTDIKGHEITLHHFHPVSLIAERANFENIPYPANAEFETNGKVLVINFKTFEKELLKDSNLCFNIVKSLLYKIKILDDVIVQNLMMDAVTRTAKFIYEHEDLFISLKHNKIASILNMTPETLSRILKKFKTRGIIQKDGGTYKINREELKKLL
SIO_010081: PERMA_RS01460
subclass of: SO_0000673
so part of: PERMA_RS01460
location: complement(269736..270365)
location: region:269736-270365:-1
so has part: feature:269736-270365:-1:exon

WP_012676206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269736-270365:-1:exon

PERMA_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01465
old locus tag: PERMA_0296
so part of: sequence
location: complement(270398..271093)
location: region:270398-271093:-1
so has part: feature:270398-271093:-1:exon
subclass of: SO_0000010

position:270398:-1
position: 270398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271093:-1
position: 271093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270398-271093:-1:exon

PERMA_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01465
old locus tag: PERMA_0296
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012964362.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: anaerobic ribonucleoside-triphosphate reductase activating protein
translation: MIKIGGIHKFSLIDFPSRISAVIFVQGCNLRCPYCHNRHLVLPEYFGYTIGIDEVFRFLESRKKMIEGIVISGGEPTIYEGIKDFIKKIKEFGYLVKLDTNGTNPEVLKELIEEKLVDYVAMDIKASAGKYEYISGSSISMDKIKKSIEILLQSDIEYEFRTTLIKDLLTYNDIIKIGQMIKGAKRYALQNFVSSENLINKEIKNKTGFSREEREKLKKRLKNYVKEIILR
SIO_010081: PERMA_RS01465
subclass of: SO_0000673
so part of: PERMA_RS01465
location: complement(270398..271093)
location: region:270398-271093:-1
so has part: feature:270398-271093:-1:exon

WP_012676735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270398-271093:-1:exon

PERMA_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01470
old locus tag: PERMA_0297
so part of: sequence
location: complement(271175..272980)
location: region:271175-272980:-1
so has part: feature:271175-272980:-1:exon
subclass of: SO_0000010

position:271175:-1
position: 271175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272980:-1
position: 272980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271175-272980:-1:exon

PERMA_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01470
old locus tag: PERMA_0297
EC number: 1.17.4.2
inference: COORDINATES: protein motif:HMM:NF006126.0
GO function: GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleoside triphosphate reductase
translation: MERNLIDSYLKKLDWRVTENSNTTYSLQGLNFYISSEVTKHYWLTKIYTKDIAEAHRNGDFHIHDLQNLSVYCVGWDLYDLLINGFKGAYGKAESKPPKHFTSALGQIVNFFYTLQGEAAGAQAFSNFDTLLAPFVRYDGLSYREVKQAIQEFVFNLNVPTRVGFQTPFTNLTFDLKASASAYADQYVIIGGKVQKEKYKEFQKEMDMINRAFFEVMSEGDASGRIFTFPIPTYNITKDFDWDNPIYDGLWYMTGKYGIPYFANFVNSDMDPNDARSMCCRLRLDIRELKKRGGGLFGANPLTGSIGVVTINLPRLGYLSKDENEFFIRLEYLLDLAKESLETKRAFLEELTEKGLYPYSKFYLRSIKERTGSFWKNHFSTIGVIGMNEACLNLFGESIATERGKAFSEKVLDFIREKLFRYQEETGNNYNLEATPAEGTSYRLARIDKSRYPDIIVANEEDYQRGAQPFYTNSTHLPVDYSDDPVFVLDHQDSLQTKYTGGTVIHFFLGEKISEKESVKKFIKTVCENYHLPYFTLTPTFSVCPNHGYISGEHRLCPECDTETEVYSRIVGYFRPVKYWNDGKKEEFIKRKSYKIRVTLR
SIO_010081: PERMA_RS01470
subclass of: SO_0000673
so part of: PERMA_RS01470
location: complement(271175..272980)
location: region:271175-272980:-1
so has part: feature:271175-272980:-1:exon

WP_012676142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271175-272980:-1:exon

PERMA_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: napA
locus tag: PERMA_RS01475
old locus tag: PERMA_0298
so part of: sequence
location: 273268..276108
location: region:273268-276108:1
so has part: feature:273268-276108:1:exon
subclass of: SO_0000010

position:273268:1
position: 273268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276108:1
position: 276108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273268-276108:1:exon

PERMA_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: napA
locus tag: PERMA_RS01475
old locus tag: PERMA_0298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459162.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0008940 - nitrate reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrate reductase catalytic subunit NapA
translation: MEVKEREKRETGFELSRRDFLKTAAAVSAAAAVGMKVPEEAMAAAREAEAGWRWDKAVCRFCGTGCGIMIAVKDGRIVAVKGDPKAPVNRGLNCIKGYFTAKIMYGADRLTKPLLRMNERGEFDKNGKFRPVSWQRAFEEMAKQFKKAYNELGPEGVAIFSSGQYTIMEGYAAVKLTKAGWRTNNIDPNARHCMASAVAAFIQTFGIDEPSGCYDDIELTDTILVWGSNMAEMHPILWARVTDRKLSDPDNVRLVVLSTFRHRTMDLADIDIVFRPSTDVAIWNYIAREIVYNHPEAIDWDFVNKHTVFATGYIDIGYGMRTPDHPSFTEKERETVRKQVAKPVSNLEAKALSIYGYKEGDIIQMKHAKQAGKHWIITFEDFKKGLEPYTLDYVARIAKGDPDEDLETFKRKLKALADLYIDKNRKALTFWTMGFNQHTRGTWCNELAYTVHLLLGKQAKPGSGAFSITGQPSACGTAREVGTFAHRLPADMVVFNPKHRKIAEKIWRIPEGTINPKVGSHIVKIMRDLEDGKIKWAWVMVCNPWQDTANANHWIKAARKMDNFIVVSDSYPGISAKVADLILPAAMIYEKWGAYGNAERRTQHWRQQVIAPGEAMPDIWHIVEFSKYFKLKEVWKEWRLSDGTVLPNVLDKAKEMGYDPEMTLYEVLFANDYFKSFKWPDPIAKNPNTGEMHPNTEAEGDHRNVRGIDGKPWKGYGFFIQKALWEEYRKFGNGHGHDLAYFDTYHRVRGLRWPVVDGKETLWRFNAKYDPYVRKLAPGEDFAFYGPALKSLPKGDLFGPKTKQKFSLKNKAKIFFRPYMDPPETPDSEYPFWLATGRVLEHWHSGTMTMRVPELYRAVPEALCYMHPADAKKLGVKDGELVWVESRRGKVKARVETRGRNRPPRGLVFVPWFDERVYINKVTLDATCPISKQTDYKKCAVKIYKA
SIO_010081: PERMA_RS01475
subclass of: SO_0000673
so part of: PERMA_RS01475
location: 273268..276108
location: region:273268-276108:1
so has part: feature:273268-276108:1:exon

WP_015898889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273268-276108:1:exon

PERMA_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: napG
locus tag: PERMA_RS01480
old locus tag: PERMA_0299
so part of: sequence
location: 276121..276981
location: region:276121-276981:1
so has part: feature:276121-276981:1:exon
subclass of: SO_0000010

position:276121:1
position: 276121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276981:1
position: 276981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276121-276981:1:exon

PERMA_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: napG
locus tag: PERMA_RS01480
old locus tag: PERMA_0299
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288062.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin-type protein NapG
translation: MSENNKTDSNVNKERRKFFIKTLQGIGLSILGGTVWGAYVSEAKTDPLVLRPPGALKEEDFLKTCIKCGLCVEACKNRDSNPDRTKSTATLRLASPGDHKPIGTPYFIPREIPCYMCEDIPCVPVCPTGALDVDSVSSIKNGKKVLDINKARMGVAVVDEEHCIAFWGIQCDACYRACPLIDEAIKLEYRRNPRTGKHAFLLPVVYSDVCTGCGLCEKACVTEKAAIYVLPREIALGKVGKHYIKGWEKKDEERLKGAKGIETTRTERSKLSPEEYLNIEDLLDEE
SIO_010081: PERMA_RS01480
subclass of: SO_0000673
so part of: PERMA_RS01480
location: 276121..276981
location: region:276121-276981:1
so has part: feature:276121-276981:1:exon

WP_012676233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276121-276981:1:exon

PERMA_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: napH
locus tag: PERMA_RS01485
old locus tag: PERMA_0300
so part of: sequence
location: 276971..277831
location: region:276971-277831:1
so has part: feature:276971-277831:1:exon
subclass of: SO_0000010

position:276971:1
position: 276971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277831:1
position: 277831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276971-277831:1:exon

PERMA_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: napH
locus tag: PERMA_RS01485
old locus tag: PERMA_0300
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288063.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: quinol dehydrogenase ferredoxin subunit NapH
translation: MKSKEDKKEAGFLYKHRYLIARRVVQLSIISLYIAGNVYGWKILQGNLSASKIFDVIPMADPYATLQMFAAGVIVGTDVLIGAAIVIIFYGLIGGRAFCSWVCPINMVTDLANWIRVKTGLHREEWQLRISRKLRYWILGISLVLSALIAVPAFEFVSPISMLHRGLIFGMGMGWAAVLAVFLFDLFVTKNGWCGHICPLGGFYSLITKPSAIRVKHDADKCTLCLNCKNVCPEKQVLHMIGKESVFVTSGECINCARCIEVCNDDALNFGFRYKPQGKKEEGKND
SIO_010081: PERMA_RS01485
subclass of: SO_0000673
so part of: PERMA_RS01485
location: 276971..277831
location: region:276971-277831:1
so has part: feature:276971-277831:1:exon

WP_012675431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276971-277831:1:exon

PERMA_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01490
old locus tag: PERMA_0301
so part of: sequence
location: 277824..278366
location: region:277824-278366:1
so has part: feature:277824-278366:1:exon
subclass of: SO_0000010

position:277824:1
position: 277824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278366:1
position: 278366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277824-278366:1:exon

PERMA_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01490
old locus tag: PERMA_0301
inference: COORDINATES: protein motif:HMM:NF015828.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrate reductase cytochrome c-type subunit
translation: MIKKKLGMLMLVPIVGVSIFACATASEKALSSEDLSYRNVPLTATAVPPAVEFPKEPPGKAKRFTRAYENAPPLIPHSVEGLLPITKDNNACLGCHMPEVAKDVGATPISPTHFIDFFRLPEGKIVKLKDLDPARFNCSQCHVPQAKTKPLVQNTFKPDYRDPSTKNRTKLYKNLLEGVK
SIO_010081: PERMA_RS01490
subclass of: SO_0000673
so part of: PERMA_RS01490
location: 277824..278366
location: region:277824-278366:1
so has part: feature:277824-278366:1:exon

WP_012676366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277824-278366:1:exon

PERMA_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01495
old locus tag: PERMA_0302
so part of: sequence
location: 278373..278927
location: region:278373-278927:1
so has part: feature:278373-278927:1:exon
subclass of: SO_0000010

position:278373:1
position: 278373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278927:1
position: 278927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278373-278927:1:exon

PERMA_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01495
old locus tag: PERMA_0302
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin-type protein NapF
translation: MEKKVDRRGFLKTLPFFPAAIVDEIVEGSEKNEEEYTPVFIKPPYTVKEADFSLCKDCEGFCVTSCEEDIIKRTEEGIPHIVFGDRGCTFCEKCAESCPEGILSVENGEKNIQVNIRIDINKCVAWKKTMCFSCKEPCLDNAIKFEGLFNPQIIPDRCTGCGFCVSVCPVSAISVDIPSGEGYD
SIO_010081: PERMA_RS01495
subclass of: SO_0000673
so part of: PERMA_RS01495
location: 278373..278927
location: region:278373-278927:1
so has part: feature:278373-278927:1:exon

WP_012676488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278373-278927:1:exon

PERMA_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01500
old locus tag: PERMA_0303
so part of: sequence
location: 278920..279876
location: region:278920-279876:1
so has part: feature:278920-279876:1:exon
subclass of: SO_0000010

position:278920:1
position: 278920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279876:1
position: 279876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278920-279876:1:exon

PERMA_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01500
old locus tag: PERMA_0303
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: WD40 repeat domain-containing protein
translation: MIRTFVLLLFFVSIAYGKVFKNTDIVDLKSAITEIRLKDGKLYVSVELGKIYVLDLEEKKVLNVIELPEIENYFGEKLKPKVFSIDICRNGNIIAVVEGFDGTRELKFITVNDGRIHTIIPGKRRISMTKVRFVDKNNVVVATTGDEILLISLDDKKIHYRKSVGMSTFSDMEINEDKTLVAVGDESGDVHIADVKTGDLVKDLTGINVDRLFNVDFRNGRVASGGRDRRVAVYDLETGKGKRFDGQFLVFGLGLSPSAKYLAYLYNDKNDVAVVNVDTGSRVDMLTGHKYTVSVILFLDENSLIVGCDDGKLFFWRR
SIO_010081: PERMA_RS01500
subclass of: SO_0000673
so part of: PERMA_RS01500
location: 278920..279876
location: region:278920-279876:1
so has part: feature:278920-279876:1:exon

WP_012675574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278920-279876:1:exon

PERMA_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01505
old locus tag: PERMA_0304
so part of: sequence
location: 279879..280238
location: region:279879-280238:1
so has part: feature:279879-280238:1:exon
subclass of: SO_0000010

position:279879:1
position: 279879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280238:1
position: 280238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279879-280238:1:exon

PERMA_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01505
old locus tag: PERMA_0304
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459168.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chaperone NapD
translation: MNISSIVVMTKPEHIQDVLKSLEESGLCDIHFYDEKGRIIVTIEGEDVYEETFKLRAIQDIPHVVSAEMSFAYSEEELQKAINEFERVQKEQEVPEILERDDVKAEAIVYKGHIKAYIK
SIO_010081: PERMA_RS01505
subclass of: SO_0000673
so part of: PERMA_RS01505
location: 279879..280238
location: region:279879-280238:1
so has part: feature:279879-280238:1:exon

WP_012676700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279879-280238:1:exon

PERMA_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01510
so part of: sequence
location: 280267..280446
location: region:280267-280446:1
so has part: feature:280267-280446:1:exon
subclass of: SO_0000010

position:280267:1
position: 280267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280446:1
position: 280446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280267-280446:1:exon

PERMA_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01510
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAGNGGDQIIKIKIQDTNSTKTIQVILKLIQINDYFSSKGDFKKRYFEIFENPMEVGL
SIO_010081: PERMA_RS01510
subclass of: SO_0000673
so part of: PERMA_RS01510
location: 280267..280446
location: region:280267-280446:1
so has part: feature:280267-280446:1:exon

WP_041530855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280267-280446:1:exon

PERMA_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01515
old locus tag: PERMA_0305
so part of: sequence
location: 280443..281711
location: region:280443-281711:1
so has part: feature:280443-281711:1:exon
subclass of: SO_0000010

position:280443:1
position: 280443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281711:1
position: 281711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280443-281711:1:exon

PERMA_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01515
old locus tag: PERMA_0305
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKRKLKLALASLLMMEGFILGQGAVSDVSAQSAFIDDVKPYLEFRPRYEYVDVSGSTNDAASALTLRTKIGVKIGSVLGVPGLKGQIEAIDVGAFIDDYDPQKSGYEKVADPPNTRITQAFISYTVGKTTFIAGRKYVAIDDHRFIGTVNWRQMPQSFGVLAIADNTIPNLNVLVAGIYERKGILDKFNMDWKLDKMPLIFDVNYTVSPQLRLKGFAYLITDVHNTYGVKASGKVDLGAAKISYLAEYAQQKDPYTTDNAATKPKIDTDYYRVKVGASSGGFFGNVMYTYFGDAGGKAKGFSVPLATNHKWDGWSDVLLTGAANGFDGGLNEICISAGYKNKTIGKIMVAYLTFDSDKSVGGIGKSVGTEIDALYAKKLTKRLSFLAKAAFYNADNGYYSLGSLYGTKDVTKYWLMLDYKY
SIO_010081: PERMA_RS01515
subclass of: SO_0000673
so part of: PERMA_RS01515
location: 280443..281711
location: region:280443-281711:1
so has part: feature:280443-281711:1:exon

WP_012676823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280443-281711:1:exon

PERMA_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01520
old locus tag: PERMA_0306
so part of: sequence
location: 281816..283459
location: region:281816-283459:1
so has part: feature:281816-283459:1:exon
subclass of: SO_0000010

position:281816:1
position: 281816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283459:1
position: 283459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281816-283459:1:exon

PERMA_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01520
old locus tag: PERMA_0306
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008287727.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nitrite reductase
translation: MKVSRSLTTFLSAATVASFLTVAVTAANAGPPPLTKEEMKKASQIFFDRCAGCHGMLRKGATGPALTPEALKKKGYNTEVLEAFIYNGTPGGMPDWGKQGVLSKSEINLLARFLQHEPPSPPEMSLADMKRSWKVFIPPEKRPKRPQHNLNWKNFFGVILRDVGKVAIVDGDTKKLVNIVDTGFAVHILRSSASGRYMYSIGRDGKATVIDLWLKKPDKVAEVKTCYDARSIDTSKYHGYEDKYAVIGCYWPPSFVVVDGETLEPKKIVSTSSYYYDTQEFVREARVASIVSSHYDPIWVLNIKEAGQVWLVDYSKVDKGTVKIDMIDAERYLHDGGWDLSKRYFLVAANMRNTIVVIDTKDKELEALIKVGTKPHPGRGANIDHPKYGPIWCTGHIGEKRVACIGTDPEGHPEYAWKVVKWFNLPGEGGGNLFIKTHPNSKYLLADRPLNPDPELKRSIFVFDKVTFKLVKTLKIPSKYKNVRAVHEEFNEDGSEFWISVWGKKDYPTAILVYDAKTLKLKKEITGDWVRTPTGKFNVTNTMKDIY
SIO_010081: PERMA_RS01520
subclass of: SO_0000673
so part of: PERMA_RS01520
location: 281816..283459
location: region:281816-283459:1
so has part: feature:281816-283459:1:exon

WP_012676432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281816-283459:1:exon

PERMA_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01525
old locus tag: PERMA_0307
so part of: sequence
location: 283462..285132
location: region:283462-285132:1
so has part: feature:283462-285132:1:exon
subclass of: SO_0000010

position:283462:1
position: 283462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285132:1
position: 285132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283462-285132:1:exon

PERMA_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01525
old locus tag: PERMA_0307
inference: COORDINATES: protein motif:HMM:NF014312.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome D1 domain-containing protein
translation: MRRWLLLLLFGLSVVATSYPQEVGEGQLLYQTHCASCHGEDRAGKVAPPLFSLFLKRYSEKKLFNIIKNGLPASQMPAFSHLSEKEIKQIITYIKKPANISWDIDKIKKSITLNSDKKGKDLKIRDIKNIVAVVERGKNKVWIMEGLQILDKFDFKNVHGGLKFSPSGWSVYVPSRDGWIGRYDIDKGRFYGKVRACVYLRNISLDRTGKYILVSCWLPEGIVVLDGETFSPVRYIKQDGLISAIYELYSEDKAVFSFKNRPVIGFLDTKNFKISYLKIKEPYEDFFIDPFERFIIGTSRKGTVLSVYDIRKEKEVFNYPIEGMPHLASATYWYRDGKFYFATPHMIMPYVTVWQMYNWKFVKKVNTEGNGFFVRTHPSTPYLWTDNGKDKVILIDKTDYSVKSIETFKGKRVIHTEFSGDGKYAYVSLYNRDGNLLIYDSITLDLLKNIPASIPIGKYNIINKSRKYAPVLLGREVFLKKCWGCHHETQEAFAPSFRWIVNRRDRSTIVAHILNPEGMYKALGYSRNAMPQLNLSEWELEAVVSYMMEFKDAQNN
SIO_010081: PERMA_RS01525
subclass of: SO_0000673
so part of: PERMA_RS01525
location: 283462..285132
location: region:283462-285132:1
so has part: feature:283462-285132:1:exon

WP_012675226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:283462-285132:1:exon

PERMA_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01530
old locus tag: PERMA_0308
so part of: sequence
location: 285116..286204
location: region:285116-286204:1
so has part: feature:285116-286204:1:exon
subclass of: SO_0000010

position:285116:1
position: 285116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286204:1
position: 286204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285116-286204:1:exon

PERMA_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01530
old locus tag: PERMA_0308
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012962797.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MLRITEYIRKSLDGKKIRPFNGVILIWNLTNACNLFCQHCYSAANLSRAGEPSIDEIRSQIPYLKEAGVKVLILSGGEPLIREDIFDIANLFKENGFNVTLSTNGLLIDEKNIESIKECFSYVGISIDGDQKTHDAFRGMEGAFERSVEALRLVRDSGIKTGIRFTITSQTYRSIPFIFDLALNERIPKIYFSHLVYSGRGRNLNQAEKEDYRKVVDYIIERSFEFVDKGVGIDVVTGNNEADAVVLYEKFKERYPEKAEILYENLKIWGGNQAGVRIADIDYRGFVKPDTYFPLKLGNIKEKNFYEIWNSNGILSKLRQHPRPVEGRCKYCRYLEICNGNSRSRAYAVYGNYFAEDPECYI
SIO_010081: PERMA_RS01530
subclass of: SO_0000673
so part of: PERMA_RS01530
location: 285116..286204
location: region:285116-286204:1
so has part: feature:285116-286204:1:exon

WP_012676367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285116-286204:1:exon

PERMA_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01535
old locus tag: PERMA_0309
so part of: sequence
location: 286192..287250
location: region:286192-287250:1
so has part: feature:286192-287250:1:exon
subclass of: SO_0000010

position:286192:1
position: 286192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287250:1
position: 287250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286192-287250:1:exon

PERMA_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01535
old locus tag: PERMA_0309
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008287730.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome D1 domain-containing protein
translation: MLHLIMVFLISFSTVFAEKLYVVERERGSLAVIQDGKFEGEIRDLGNLNHAIVKTDGDYSYVISRNGYFSKVDNRSDRVVRKIKPGNSGIGFTFVGDYIAIAHYDPKKVTILTKDLDKYIVVETGSRNVGIKVYYPYLVFSLMDKDQIWVLNADKGFELETVIDNVGKLPFDALIDGDRYIVGFFKEKGVGILDLSNFKYRKVKFRSDKDQEVVFKIPHFGMWGIVDERAIIPSVGERKAYVVNIKSMKVEKSIDLIGLPVFISVSPDRRFAVVNYSGDKEDYITVIDLKDFKPVKNIKAGKRVMHLRFSKDGKRLYISSYFENRLKIFDTDNFRIIKEITVPTPSGIFIVR
SIO_010081: PERMA_RS01535
subclass of: SO_0000673
so part of: PERMA_RS01535
location: 286192..287250
location: region:286192-287250:1
so has part: feature:286192-287250:1:exon

WP_012675245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286192-287250:1:exon

PERMA_RS01540
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: cobA
locus tag: PERMA_RS01540
old locus tag: PERMA_0310
so part of: sequence
location: 287264..288019
location: region:287264-288019:1
so has part: feature:287264-288019:1:exon
subclass of: SO_0000010

position:287264:1
position: 287264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288019:1
position: 288019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287264-288019:1:exon

PERMA_RS01540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: cobA
locus tag: PERMA_RS01540
old locus tag: PERMA_0310
EC number: 2.1.1.107
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459179.1
GO function: GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO process: GO:0019354 - siroheme biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uroporphyrinogen-III C-methyltransferase
translation: MNGKVYIVGAGPGDPDLLTVKAYKLIQKADVILYDRLINPEILLMAKPECELVYVGKEDGKHIMEQDKINFLLQDFVKKYKIVLRLKGGDPFVFGRGGEEALFLEEQGIEYEVVPGITSAIAVPAYAGVPVTHRGISSSFAVVTGHGHKGKFPDINWKSLAGIGTLIFLMGVSNREKIAQNLIEAGRNPDEPVIFIEKGTTKEQKSIESTLKEVAEGKVTVYPPAIFLIGDVVSLRKKIHWFENQLEEIRL
SIO_010081: PERMA_RS01540
subclass of: SO_0000673
so part of: PERMA_RS01540
location: 287264..288019
location: region:287264-288019:1
so has part: feature:287264-288019:1:exon

WP_012676540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287264-288019:1:exon

PERMA_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01545
old locus tag: PERMA_0311
so part of: sequence
location: 288016..289050
location: region:288016-289050:1
so has part: feature:288016-289050:1:exon
subclass of: SO_0000010

position:288016:1
position: 288016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289050:1
position: 289050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288016-289050:1:exon

PERMA_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01545
old locus tag: PERMA_0311
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008287732.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lrp/AsnC family transcriptional regulator
translation: MTEFEKELLTILQEGIPIVENPFNAIAKKIGTSEDDVIESIKKLKKEKIIRQISPIYDTKALGYSSSLVAFKVKDIQKAVSVINSHPGVSHNYERNDQYNIWFTLAVPPDSKIGLDETVEILADLSGAEDYVILRTVKTYKIGVKLTFSSLDERSEDMNQSYNAGNVNLYEIEKNIIKITQEDIPLEPKPFHIFADKLGIPVYTLLHKLNQFKENRVMRRFAAILYHRKAGFKANGMTVWKVPEEIADDVGKFFSTFKSVSHCYLRTINGRWSYNLFSMIHGRTKEEIEEFVEKLSRETGISDYKILYSTKEFKKKRIRYFSEDFKLWEEAIINGERTGANIQG
SIO_010081: PERMA_RS01545
subclass of: SO_0000673
so part of: PERMA_RS01545
location: 288016..289050
location: region:288016-289050:1
so has part: feature:288016-289050:1:exon

WP_012676522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288016-289050:1:exon

PERMA_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01550
old locus tag: PERMA_0312
so part of: sequence
location: 289016..289498
location: region:289016-289498:1
so has part: feature:289016-289498:1:exon
subclass of: SO_0000010

position:289016:1
position: 289016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289498:1
position: 289498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289016-289498:1:exon

PERMA_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01550
old locus tag: PERMA_0312
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012962798.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-vinyl reductase
translation: MENVLEQISKVKRDKLGTDIPIVIFRALRHFTSIYASDLLGEKGANILFVNAGRTLGKELGKVLYDQDINRYLSNVSDFVKKEKIGIINVAEFSDEKLVIQLDECITCAGMDNIGKRICFFEVGLVLGIVEYYLGKKLSAFESRCNANGEGVCEVTVILK
SIO_010081: PERMA_RS01550
subclass of: SO_0000673
so part of: PERMA_RS01550
location: 289016..289498
location: region:289016-289498:1
so has part: feature:289016-289498:1:exon

WP_012676909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289016-289498:1:exon

PERMA_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01555
old locus tag: PERMA_0313
so part of: sequence
location: 289599..289892
location: region:289599-289892:1
so has part: feature:289599-289892:1:exon
subclass of: SO_0000010

position:289599:1
position: 289599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289892:1
position: 289892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289599-289892:1:exon

PERMA_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01555
old locus tag: PERMA_0313
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MELNAIVLLLNLIIFWILGESAEGFFKKEIERSVSFLLTILIIIYSVDMMMLLSINYLFNWYSSPVLLLKEQSVFYLILSSVVLVSYYLKGKIKRFS
SIO_010081: PERMA_RS01555
subclass of: SO_0000673
so part of: PERMA_RS01555
location: 289599..289892
location: region:289599-289892:1
so has part: feature:289599-289892:1:exon

WP_012675726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289599-289892:1:exon

PERMA_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01560
old locus tag: PERMA_0314
so part of: sequence
location: complement(289923..292145)
location: region:289923-292145:-1
so has part: feature:289923-292145:-1:exon
subclass of: SO_0000010

position:289923:-1
position: 289923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292145:-1
position: 292145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289923-292145:-1:exon

PERMA_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01560
old locus tag: PERMA_0314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675082.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO process: GO:0009060 - aerobic respiration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome c oxidase subunit I
translation: MAGDNSQKKWFLVFVLSLVGAAVIFLGLTIKQIKDVPPIPKEVRGTSTLYTYDDVVQGKAFFQKYVLMNHGTLLGNGAYIGPDYTSLFLHKKIENLQDIYAQKKFGRNYADLTDEEKGLVDILVKKDVREISTLKEDVTTITPEHEQAYLKAKEYLKEFLVKGNPSYAWIGGLIKPEEADYIVSFVDWSTLVAVTTRPGTDVTYTNNWPPEPAIGLNAPYSSLFWSLIAFMACWSLTIVVLWAFYDYFLKFDAEKPAPSLEIKSLTPMQEKVLKFVPLVPVFFVLQVALGGYLAHLYADPAHSWIVPQSLLPFNVARSFHLNLAVLWIAIGWLAGGLFIAPLASKGKDFKFPIAVDILWVALVIVGLGGLIGLWLGALGKLPAELWFWLGNEGREYIELARVWDIGLVVGLVLWFTIVFFTVRQAEKLTPPLQMIIWSAFAIAVLYMAGMAPLHKIMPNFTIDDYFRWWVVHLWVENTFELFAAGTLAFLTVSLGLVSVRFATIMMFFEAFLIVAAGTLGTGHHYFWMGENEFWIAVGGVLSSLEPLPLVILMVEASKEYLHIKKAGQAFPFRMSFLWLVGSAFLNWLGAGFYGMLINLPIINYYEHGTYFGMAHGHVALLGAFGYISIAFLYFIVRANALAKGLHWDEKISNLAFWMMTAGIFLYAIPTLVIGEKQMEWAFEYGYWAARTREVLEGLGFWMWVRIIPDSLILAGAVLILVDIIYKLYLSAKEKPATAAA
SIO_010081: PERMA_RS01560
subclass of: SO_0000673
so part of: PERMA_RS01560
location: complement(289923..292145)
location: region:289923-292145:-1
so has part: feature:289923-292145:-1:exon

WP_015898961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289923-292145:-1:exon

PERMA_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01565
old locus tag: PERMA_0315
so part of: sequence
location: complement(292159..292566)
location: region:292159-292566:-1
so has part: feature:292159-292566:-1:exon
subclass of: SO_0000010

position:292159:-1
position: 292159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292566:-1
position: 292566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292159-292566:-1:exon

PERMA_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01565
old locus tag: PERMA_0315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIGGFLWKISYMLHVISNAAFFGATLLAVIACDTICTGKNLKAYLKLSSVFVTFTGLTGILLLSILSMSGMDDLTNNPVGQSVLVMIASYTLVLFIFTLVVIYKGGEARIYKKMFSIMLISYLVAYLSRTYLTT
SIO_010081: PERMA_RS01565
subclass of: SO_0000673
so part of: PERMA_RS01565
location: complement(292159..292566)
location: region:292159-292566:-1
so has part: feature:292159-292566:-1:exon

WP_012675854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292159-292566:-1:exon

PERMA_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01570
old locus tag: PERMA_0316
so part of: sequence
location: complement(292808..293137)
location: region:292808-293137:-1
so has part: feature:292808-293137:-1:exon
subclass of: SO_0000010

position:292808:-1
position: 292808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293137:-1
position: 293137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292808-293137:-1:exon

PERMA_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01570
old locus tag: PERMA_0316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459986.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MGLTLKPDGVFNDEKPHIQPATTGKNFKMVYFHLKAGQKIPLHTTSSEVVVTVLKGKGNFFAGSYENINTLSEGESFFYEPEEPHGFEAVEDMIVQAVITPIPEKKLQL
SIO_010081: PERMA_RS01570
subclass of: SO_0000673
so part of: PERMA_RS01570
location: complement(292808..293137)
location: region:292808-293137:-1
so has part: feature:292808-293137:-1:exon

WP_015898849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292808-293137:-1:exon

PERMA_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01575
old locus tag: PERMA_0317
so part of: sequence
location: complement(293176..293604)
location: region:293176-293604:-1
so has part: feature:293176-293604:-1:exon
subclass of: SO_0000010

position:293176:-1
position: 293176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293604:-1
position: 293604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293176-293604:-1:exon

PERMA_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01575
old locus tag: PERMA_0317
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYEIAKIIHLVSAVVFGGVLFVEVVMLPVLKKEFGEEFFKKVEFTIIRKRGIKIVPLFVLSLYLSGLFMFHYHMKDLDLSTTFGKLLLLKVSIAFAVILGVITAITMFKLGKSENRLFDYIHQFAFIAVFTVIILAKLMFVL
SIO_010081: PERMA_RS01575
subclass of: SO_0000673
so part of: PERMA_RS01575
location: complement(293176..293604)
location: region:293176-293604:-1
so has part: feature:293176-293604:-1:exon

WP_012675562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293176-293604:-1:exon

PERMA_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01580
old locus tag: PERMA_0318
so part of: sequence
location: complement(293607..294035)
location: region:293607-294035:-1
so has part: feature:293607-294035:-1:exon
subclass of: SO_0000010

position:293607:-1
position: 293607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294035:-1
position: 294035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293607-294035:-1:exon

PERMA_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01580
old locus tag: PERMA_0318
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288655.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rrf2 family transcriptional regulator
translation: MLSVACKDSIRAMIYIAKYGDRNSFLSIHKIAEDLDLSFYFLSKNLQKLVKVGLLESYRGPNGGVRLAKPPDQIKLLDIIDAIDGTEFFNKCILGFDTCSDENPCVIHHKWAEKRNEIYEMFFGTTLSEAVEDIHKFSNIKI
SIO_010081: PERMA_RS01580
subclass of: SO_0000673
so part of: PERMA_RS01580
location: complement(293607..294035)
location: region:293607-294035:-1
so has part: feature:293607-294035:-1:exon

WP_012676710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293607-294035:-1:exon

PERMA_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01585
old locus tag: PERMA_0319
so part of: sequence
location: complement(294035..294463)
location: region:294035-294463:-1
so has part: feature:294035-294463:-1:exon
subclass of: SO_0000010

position:294463:-1
position: 294463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294035-294463:-1:exon

PERMA_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01585
old locus tag: PERMA_0319
inference: COORDINATES: protein motif:HMM:NF013936.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemerythrin domain-containing protein
translation: MGKIERILKELTVEHTDLLKKIKDFQERLESDFSDELIDEILKFLDEELEEHARKEEEDLVDAIEEADATFDSGALIFGHQTLVDAIDDFKTAVDEYRKGKSSQKDVVKYADRVFTLIKDHFIEEEHFLFPDILKLDLERFE
SIO_010081: PERMA_RS01585
subclass of: SO_0000673
so part of: PERMA_RS01585
location: complement(294035..294463)
location: region:294035-294463:-1
so has part: feature:294035-294463:-1:exon

WP_012675605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294035-294463:-1:exon

PERMA_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01590
old locus tag: PERMA_0320
so part of: sequence
location: complement(294538..294996)
location: region:294538-294996:-1
so has part: feature:294538-294996:-1:exon
subclass of: SO_0000010

position:294538:-1
position: 294538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294996:-1
position: 294996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294538-294996:-1:exon

PERMA_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01590
old locus tag: PERMA_0320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674281.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopD family protein
translation: MLDIIILTIHILVASFWIGGMLFMVLALSPYVRKLPEDLSVRSYQEVGKRYSFWGTVLGLPILFLTGLYNMHVMGVSFHDLFNFSNDYASTLHHKLHLFILTVILAVIHDFYIGPRSHINRKFRITARIIGVLNLVLGISIIFLAAKLRFGG
SIO_010081: PERMA_RS01590
subclass of: SO_0000673
so part of: PERMA_RS01590
location: complement(294538..294996)
location: region:294538-294996:-1
so has part: feature:294538-294996:-1:exon

WP_012676216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:294538-294996:-1:exon

PERMA_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: aroD
locus tag: PERMA_RS01595
old locus tag: PERMA_0321
so part of: sequence
location: 295126..295815
location: region:295126-295815:1
so has part: feature:295126-295815:1:exon
subclass of: SO_0000010

position:295126:1
position: 295126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295815:1
position: 295815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295126-295815:1:exon

PERMA_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: aroD
locus tag: PERMA_RS01595
old locus tag: PERMA_0321
EC number: 4.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460119.1
GO function: GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I 3-dehydroquinate dehydratase
translation: MEIGKYPLIALPLDDRDLESKLSQAKSKGIDLIELRIDMFSSTQSDYVKDISRKVKDSGFGIIGTVRSVEEGGLKDLKDSERIELFEAVSDYADIIDIELRSERLHEDLVKLCRDKEKFLLVSYHDFEKTPSEDEIQEIIDRSSFGDIIKFAFMVKDVEDVGRILSVTHKNRDKKIVSIGMGDLGKITRVAGFFFGSLITYTYIGESVAPGQIEVKELIKELKFYGLRS
SIO_010081: PERMA_RS01595
subclass of: SO_0000673
so part of: PERMA_RS01595
location: 295126..295815
location: region:295126-295815:1
so has part: feature:295126-295815:1:exon

WP_012675785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295126-295815:1:exon

PERMA_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01600
old locus tag: PERMA_0322
so part of: sequence
location: 295819..296169
location: region:295819-296169:1
so has part: feature:295819-296169:1:exon
subclass of: SO_0000010

position:295819:1
position: 295819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296169:1
position: 296169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295819-296169:1:exon

PERMA_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01600
old locus tag: PERMA_0322
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459320.1
GO function: GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraR/DksA C4-type zinc finger protein
translation: MEHLTKDQIEELKNMLLQWKEQLLQESHDSIGEPLSYEGGDEIDRADTEAGRLVMLRNLDRDRKVLKRIEMTLQKIDYGTYGICEMCGEPIPYPRLKARPIAKLCIKCKELEEENE
SIO_010081: PERMA_RS01600
subclass of: SO_0000673
so part of: PERMA_RS01600
location: 295819..296169
location: region:295819-296169:1
so has part: feature:295819-296169:1:exon

WP_012676506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295819-296169:1:exon

PERMA_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: pncA
locus tag: PERMA_RS01605
old locus tag: PERMA_0323
so part of: sequence
location: 296184..296768
location: region:296184-296768:1
so has part: feature:296184-296768:1:exon
subclass of: SO_0000010

position:296184:1
position: 296184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296768:1
position: 296768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296184-296768:1:exon

PERMA_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: pncA
locus tag: PERMA_RS01605
old locus tag: PERMA_0323
EC number: 3.5.1.-
EC number: 3.5.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008289165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional nicotinamidase/pyrazinamidase
translation: MRINITDFDALIIVDMQNDFMPGGALPVPDGDKIVDSLNRYIDLFSQKGSPVYFTRDWHPEDHISFKGYGGIWPPHCVQNTEGAQFHPELKIPSDNKFIISKGVSREFDAYSGFQGTVLDDLLKERGIKRIFVGGVATDYCVKNTVLGGLNLGYQVFVLEDGIKGVDVNEGDSERAVEVMKNKGAVIINAEDIR
SIO_010081: PERMA_RS01605
subclass of: SO_0000673
so part of: PERMA_RS01605
location: 296184..296768
location: region:296184-296768:1
so has part: feature:296184-296768:1:exon

WP_015899029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296184-296768:1:exon

PERMA_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01610
old locus tag: PERMA_0324
so part of: sequence
location: 296765..297076
location: region:296765-297076:1
so has part: feature:296765-297076:1:exon
subclass of: SO_0000010

position:296765:1
position: 296765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297076:1
position: 297076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296765-297076:1:exon

PERMA_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01610
old locus tag: PERMA_0324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal-binding domain-containing protein
translation: MIITTTDFIEGKKIRDYKGVVSKEAVIGVNIIRDVFAKVRDIVGGRSAAYEKELTNARNQILEELKEEARNLGANAVIGINFSYEMYQSMLLVSVWGTAVVVE
SIO_010081: PERMA_RS01610
subclass of: SO_0000673
so part of: PERMA_RS01610
location: 296765..297076
location: region:296765-297076:1
so has part: feature:296765-297076:1:exon

WP_012675709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:296765-297076:1:exon

PERMA_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01615
old locus tag: PERMA_0325
so part of: sequence
location: 297078..298832
location: region:297078-298832:1
so has part: feature:297078-298832:1:exon
subclass of: SO_0000010

position:297078:1
position: 297078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298832:1
position: 298832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297078-298832:1:exon

PERMA_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01615
old locus tag: PERMA_0325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545383.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional 3'-5' exonuclease/DNA polymerase
translation: MEFRYITQIDEAVKSLEAFKEDKYLFIDTEVAVKSFEDIDFFNDKIRLIQIGNYSKIFVYDMFRIPQFSEHLKELLENKGVIGHNLKFDIKFLKTNFGIFPQIVFDTMIASQLLSEDSREKHSLSALSYRLTDNHLDKSQQRSPWGIKNLTEEQLRYAAKDVQVLREIFPVLRDELNRIETPHKATGKIHETFGLDNGVAVVEMAFVPQLADIELRGMPVDEKLLKDMLQKVSTDYQREYIDFVRRYGVDPFSPQKVTNWLTSKLGLKLPTTQKGSLSSQDSALRRYIDREEVRKLLHIRSEKKILDKLKELKAHLINGRIYTQFKQIGAPTGRMASMRPNLQNITRDLRVLFRPPEGKKLIVADYSQIELRIAAEYVNDETMIKAFSEGKDLHRFTASLILGKEYDQITKDERQMAKAINFGLIYGISPRSLMEYARNSYGVDISLKDAQIFHSRFFEVYKGFKSWHDRVKEYLKEHNKMVVYTLLGRRMVVRRFTEAVNFPVQGTGSDLLKMAVVFFGKLKEDRDAGIVNLVHDEIIVECSESIADEIRDILSESMLRAGKILLKKVPVEFEVEIVESWAEK
SIO_010081: PERMA_RS01615
subclass of: SO_0000673
so part of: PERMA_RS01615
location: 297078..298832
location: region:297078-298832:1
so has part: feature:297078-298832:1:exon

WP_012675283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297078-298832:1:exon

PERMA_RS01620
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01620
old locus tag: PERMA_0326
so part of: sequence
location: complement(298835..299185)
location: region:298835-299185:-1
so has part: feature:298835-299185:-1:exon
subclass of: SO_0000010

position:298835:-1
position: 298835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299185:-1
position: 299185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298835-299185:-1:exon

PERMA_RS01620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01620
old locus tag: PERMA_0326
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MRVLIFVFFVILSQGCNRSDLSTPDSMLISAAKNGDIKLLQLALAKGAYINTTDERGGTALHWAVYYGHKEIVKLLLMHGADPLIKDKNGITPYRLAEMKGKKEILKLLNKFREKN
SIO_010081: PERMA_RS01620
subclass of: SO_0000673
so part of: PERMA_RS01620
location: complement(298835..299185)
location: region:298835-299185:-1
so has part: feature:298835-299185:-1:exon

WP_187146668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298835-299185:-1:exon

PERMA_RS10430
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: recO
locus tag: PERMA_RS10430
old locus tag: PERMA_0327
so part of: sequence
location: 299279..299974
location: region:299279-299974:1
so has part: feature:299279-299974:1:exon
subclass of: SO_0000010

position:299279:1
position: 299279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299974:1
position: 299974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299279-299974:1:exon

PERMA_RS10430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: recO
locus tag: PERMA_RS10430
old locus tag: PERMA_0327
inference: COORDINATES: protein motif:HMM:TIGR00613.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RecO
translation: MEGIFKDEAIVLRRSFAGEYDLSVTVYFRKHGKENIYIPKGQLLKSPFITSTEQFNWFKGVFLYRKENVFIREIDSFKNLSLQIASDLDLFETAYYFSNLFNRYVIFPDEKLFIFLKKSFYYLTKAKKVKNHRVNFIAKLVYLSGVFPQLDHCSVCGEVINRKNFKGVSIQTGGSVCKGCNCSDINPYISYEDTKMMDIFSKISFSKVESIKIKNPERIEIFLQEYIKEKV
SIO_010081: PERMA_RS10430
subclass of: SO_0000673
so part of: PERMA_RS10430
location: 299279..299974
location: region:299279-299974:1
so has part: feature:299279-299974:1:exon

WP_012675609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299279-299974:1:exon

PERMA_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01630
old locus tag: PERMA_0328
so part of: sequence
location: complement(299993..300646)
location: region:299993-300646:-1
so has part: feature:299993-300646:-1:exon
subclass of: SO_0000010

position:299993:-1
position: 299993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300646:-1
position: 300646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299993-300646:-1:exon

PERMA_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01630
old locus tag: PERMA_0328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008286344.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVIQLTAPPVSEYDLEHLVGRVFFKAIDLLGGLHKLAEYKTLTWLPSLARASFAIVLREEYLKTEEEIAEIVGLTKNTVRNILRADPNAALFKIEHMEELTKEEKKELRVHTAGGIAKLAYKLVKEGQESQTILEFCRELSAKAVQVCEAPWAYLVLKNIKGLKYPVENPEPLKEKLSNITIKGLDSGEVVENIAYPIKNPAQLLHEIKEYLQMKGV
SIO_010081: PERMA_RS01630
subclass of: SO_0000673
so part of: PERMA_RS01630
location: complement(299993..300646)
location: region:299993-300646:-1
so has part: feature:299993-300646:-1:exon

WP_012675722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299993-300646:-1:exon

PERMA_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01635
old locus tag: PERMA_0329
so part of: sequence
location: complement(300664..301563)
location: region:300664-301563:-1
so has part: feature:300664-301563:-1:exon
subclass of: SO_0000010

position:300664:-1
position: 300664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301563:-1
position: 301563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300664-301563:-1:exon

PERMA_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01635
old locus tag: PERMA_0329
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458812.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KaiC domain-containing protein
translation: MADDPKYQEKEFVTEHREPKVVKESIFTGSKALEKAPKVYGVPTGVEGLDDLFFIVEVEDGKVVKKTLGGIPAYSVFNITGVSDTGKSLMVEQFTVEQARKGHKVAFITVESPANFVIASIKLRAAAMGYNFEDFEDNIVLIDAASHSTLRENIPDLLATLAYAIKTYHIKYTVIDSVTGLFENKEMMARGIVRRLFNFMKKWYQTALFVSQKRSGHEELTAEAAGGYAVGHIVDGTMVLAKELIDSSFKARLYKSEVGDVVRLFRIDGCRMSGHDTKTHFMEITETGLVRILEPVSGK
SIO_010081: PERMA_RS01635
subclass of: SO_0000673
so part of: PERMA_RS01635
location: complement(300664..301563)
location: region:300664-301563:-1
so has part: feature:300664-301563:-1:exon

WP_015898917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300664-301563:-1:exon

PERMA_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01640
old locus tag: PERMA_0330
so part of: sequence
location: complement(301631..301975)
location: region:301631-301975:-1
so has part: feature:301631-301975:-1:exon
subclass of: SO_0000010

position:301631:-1
position: 301631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301975:-1
position: 301975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301631-301975:-1:exon

PERMA_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01640
old locus tag: PERMA_0330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012963345.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 6-carboxytetrahydropterin synthase
translation: MPFIIRVKREFQAAHFLTDYHGKPEPLHGHTWLVEIFIRADKLDKGGMGYDFIEIQRFLDQIIPDYKCLNDIFDFSPSAENLAKWLYEKIKERYPTLQKVVVWETKEGGAEYFE
SIO_010081: PERMA_RS01640
subclass of: SO_0000673
so part of: PERMA_RS01640
location: complement(301631..301975)
location: region:301631-301975:-1
so has part: feature:301631-301975:-1:exon

WP_012675984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301631-301975:-1:exon

PERMA_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01645
old locus tag: PERMA_0331
so part of: sequence
location: complement(301983..302474)
location: region:301983-302474:-1
so has part: feature:301983-302474:-1:exon
subclass of: SO_0000010

position:301983:-1
position: 301983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302474:-1
position: 302474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301983-302474:-1:exon

PERMA_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01645
old locus tag: PERMA_0331
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288987.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKNWPFIIITGFGIFATLVFLYFFVYGMAVNTVRSAVLLEKAYPNIKPEEYINELTAKSEKNNLRIIQLKKERNYYIIQIINDSILEKTASLSPKFAPLSVITVVVYDLGNGTAVVGNNPYIWDIVSPDSHIDDIAEDFSNQLSDIFDSIYWDLKKKKEILR
SIO_010081: PERMA_RS01645
subclass of: SO_0000673
so part of: PERMA_RS01645
location: complement(301983..302474)
location: region:301983-302474:-1
so has part: feature:301983-302474:-1:exon

WP_015898911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301983-302474:-1:exon

PERMA_RS10730
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10730
old locus tag: PERMA_0332
so part of: sequence
location: complement(302474..302611)
location: region:302474-302611:-1
so has part: feature:302474-302611:-1:exon
subclass of: SO_0000010

position:302611:-1
position: 302611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302474-302611:-1:exon

PERMA_RS10730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10730
old locus tag: PERMA_0332
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENSWWELAGIIFFSFMVITVALIWGLAIKASYNEEKQKKEEKQQ
SIO_010081: PERMA_RS10730
subclass of: SO_0000673
so part of: PERMA_RS10730
location: complement(302474..302611)
location: region:302474-302611:-1
so has part: feature:302474-302611:-1:exon

WP_012675219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302474-302611:-1:exon

PERMA_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: serA
locus tag: PERMA_RS01650
old locus tag: PERMA_0333
so part of: sequence
location: 302923..304512
location: region:302923-304512:1
so has part: feature:302923-304512:1:exon
subclass of: SO_0000010

position:302923:1
position: 302923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304512:1
position: 304512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302923-304512:1:exon

PERMA_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: serA
locus tag: PERMA_RS01650
old locus tag: PERMA_0333
EC number: 1.1.1.95
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458993.1
GO function: GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence IEA]
GO process: GO:0006564 - L-serine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoglycerate dehydrogenase
translation: MFKVLVTDHISSVGLDILNNDEEIELDYQPEIQWSELLEIISDYDAIITRSRTPVTEELLERAKRLKVVGRAGVGVDNVDLEAASRRGILVVNTPGANTVGAAELTIAHMYAVLRKLHLAHESMLQGEWNRKKFMGEELDGKVVGIIGLGNVGSQVAIRCKAAGSKVIAYDPYIPREKGDRLGVELVDTLEELIRRSDIVTLHCPLTEETRGMIGRKEFEMMKDGVYFINCARGGIVDEDAMYDFMKKGKFAGIGLDVYGKEPPDDRIRRIFEFPNISLSPHIGANTYESQDKVAIKIAKQVIAALKGQFVEAAVNAPFTVTEGFENIKAYLLLAERLGSFLTQYAGGNFRELHVEVRGSIAEHVKPIVAYVLKGFLSPILDRPVNIINAPFLAKERGIEVVESTREEGLNFKEFIKITAKDNGKEHTVGGTAFYGKFPKIMLIDRYWIDIDPEGVILVFENKDVPGVIAKLGEILARHNINIAGFRLGRLEKGKIALGALQLDERINEAILEEIQNIPEIIKAKEIIL
SIO_010081: PERMA_RS01650
subclass of: SO_0000673
so part of: PERMA_RS01650
location: 302923..304512
location: region:302923-304512:1
so has part: feature:302923-304512:1:exon

WP_012676553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302923-304512:1:exon

PERMA_RS01655
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01655
old locus tag: PERMA_0334
so part of: sequence
location: 304527..305636
location: region:304527-305636:1
so has part: feature:304527-305636:1:exon
subclass of: SO_0000010

position:304527:1
position: 304527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305636:1
position: 305636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304527-305636:1:exon

PERMA_RS01655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01655
old locus tag: PERMA_0334
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458992.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inositol-3-phosphate synthase
translation: MSEKKIKIAIAGVGNCASALIQGIYYYKEKQNIEASGLMHEEIGGYRPWDIEVVAAWDIDERKVGYDISEAIFNPPNCTAVFQNEIPKTGVKVRKGKVLDGYPEHMKNYPPENAFVLSEAREDSLETVAKVLVESGADVLINYVPVGAEKAARFYAEACLKAGVAFINCMPTFIVSDDEWAKRFESEGIPAVGDDIKSQVGATITHRVLTQLLLDRGVKIDRTYQLNVGGNTDFLNMLERSRLATKKKSKTEAVSSLIPYGMDPRNIHIGPSDYVPWLKDRKIAFIRLEGRLFGDVPMYLELRLDVEDSPNSAGVAIDAIRCAKLAQDRGIGGALYSISAYTMKHPPIQYTDWQARQMVEEFIAGMRER
SIO_010081: PERMA_RS01655
subclass of: SO_0000673
so part of: PERMA_RS01655
location: 304527..305636
location: region:304527-305636:1
so has part: feature:304527-305636:1:exon

WP_012675690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304527-305636:1:exon

PERMA_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01660
old locus tag: PERMA_0335
so part of: sequence
location: 305657..306427
location: region:305657-306427:1
so has part: feature:305657-306427:1:exon
subclass of: SO_0000010

position:305657:1
position: 305657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306427:1
position: 306427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305657-306427:1:exon

PERMA_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01660
old locus tag: PERMA_0335
inference: COORDINATES: protein motif:HMM:TIGR04219.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR04219 family outer membrane beta-barrel protein
translation: MKKTFSALAVLSLFGLSQAVPLFEGEISAGYIKQKPSGWVQYKGDQVDLKDDLNIGDEDSYFFRAKLEHPVPVLPNVAFQYMKMDFSGTGRITRSFRYGNQVFTVGDTVNSSVKMDHYDITLFYNLPFVGLATAGILDVEFGLNVRVLDFKARVKSSTVDETATATIPVPMLYGSVEISPVSLFSIKAEGRGVAYNGHSYYDLNGELRIKPITIPLAVDFFIGLGYRYERFKIDDIDDISADIKIKQPYVTAGLLF
SIO_010081: PERMA_RS01660
subclass of: SO_0000673
so part of: PERMA_RS01660
location: 305657..306427
location: region:305657-306427:1
so has part: feature:305657-306427:1:exon

WP_012676547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305657-306427:1:exon

PERMA_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01665
old locus tag: PERMA_0336
so part of: sequence
location: complement(306450..306635)
location: region:306450-306635:-1
so has part: feature:306450-306635:-1:exon
subclass of: SO_0000010

position:306450:-1
position: 306450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306635:-1
position: 306635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306450-306635:-1:exon

PERMA_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01665
old locus tag: PERMA_0336
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288334.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-oxalocrotonate tautomerase family protein
translation: MPYVNVKVAGSLTKEQKKKIVEGITKVLEEVANKPPSATYVVIEEIDRDNWGKGGKLLSEK
SIO_010081: PERMA_RS01665
subclass of: SO_0000673
so part of: PERMA_RS01665
location: complement(306450..306635)
location: region:306450-306635:-1
so has part: feature:306450-306635:-1:exon

WP_012676134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306450-306635:-1:exon

PERMA_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01670
old locus tag: PERMA_0337
so part of: sequence
location: complement(306637..307992)
location: region:306637-307992:-1
so has part: feature:306637-307992:-1:exon
subclass of: SO_0000010

position:306637:-1
position: 306637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307992:-1
position: 307992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306637-307992:-1:exon

PERMA_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01670
old locus tag: PERMA_0337
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012964132.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54 dependent transcriptional regulator
translation: MNGFSILVVDDEKNITDLLKDILEDEGFYVETAQSVKEAKERLREKDFEIIFLDVWLPDGEGTDLIPYIKEVNPISKIVMISGHANIPIAVKALKEGAFDFLEKPISTDSILAVIEKAGKEIKKEVEYRFLKEKEFESFQIIGESEPIKKLKKQIEKVAKTNAWVMIFGENGTGKELVARSIHYLSERADKPFVDINCAAIPDDLLESELFGYEKGAFSGAVSRKLGKLEIADGGTLFLDEVADMSLSSQAKLLRVLEEQEFSRLGSNQKIKVDIRVISATNKNLDREIQEGRFRQDLAFRLSVVPLYVPPLRERGDDIILLAEYFLERSCRENKMEKPVLSDDVKEALLKYSWPGNVRELKNLMERLCIFASDGIVTVDDLPSYIVKNRPVRSRSEIGIKPLKQAREEAEKEVIKQALKQYGRNLKEIAKVLEVDLSSLYRKIKQYNLEE
SIO_010081: PERMA_RS01670
subclass of: SO_0000673
so part of: PERMA_RS01670
location: complement(306637..307992)
location: region:306637-307992:-1
so has part: feature:306637-307992:-1:exon

WP_012676739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306637-307992:-1:exon

PERMA_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: alr
locus tag: PERMA_RS01675
old locus tag: PERMA_0338
so part of: sequence
location: complement(308018..309097)
location: region:308018-309097:-1
so has part: feature:308018-309097:-1:exon
subclass of: SO_0000010

position:308018:-1
position: 308018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309097:-1
position: 309097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308018-309097:-1:exon

PERMA_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: alr
locus tag: PERMA_RS01675
old locus tag: PERMA_0338
EC number: 5.1.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673730.1
GO function: GO:0008784 - alanine racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine racemase
translation: MVYRSWAEIDSKRLIQNTHNVYNYSKKGILAVVKADAYGHGSVEISKILEKISYVRKLCVATAEEGKELREGGIKKEILVLGGVLKEELDYFIEYNLQPVISDFDQLYLLKDRFSGSVHLKFDTGMHRLGFYIEDTDRVIKYIKEKNIKVEGLMSHFPSADVDPELTGHQIEKFKKIVDIFKNEGINPRFIHIQNSAGLVYRCDYCNCVRVGISLYGEKPSDNFPLNIKTVMSVKSKIISVKGIKKGDMVSYGGSFKADKDMKIGIVSFGYADGLPRELSNRGFFLVKDKRSRILGNVTMDMTIIDLSGIEDVKVGDTVLIVGKNGKEEISFNDIAKMCNTIPYEIMCRISKRVKRIIL
SIO_010081: PERMA_RS01675
subclass of: SO_0000673
so part of: PERMA_RS01675
location: complement(308018..309097)
location: region:308018-309097:-1
so has part: feature:308018-309097:-1:exon

WP_012675238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308018-309097:-1:exon

PERMA_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01680
old locus tag: PERMA_0339
so part of: sequence
location: 309228..309584
location: region:309228-309584:1
so has part: feature:309228-309584:1:exon
subclass of: SO_0000010

position:309228:1
position: 309228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309584:1
position: 309584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309228-309584:1:exon

PERMA_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01680
old locus tag: PERMA_0339
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546932.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal-associated domain-containing protein
translation: MEKLSVLTASLFLIGGISWFFFGKKKEDSSPAEESIRKKENIELDISGMHCAGCAAGIEGTLRNLPGIISVSVNFATSKGYIEYDATKITKEDIIDRIRQLGYDASLNLEEFEKKRKG
SIO_010081: PERMA_RS01680
subclass of: SO_0000673
so part of: PERMA_RS01680
location: 309228..309584
location: region:309228-309584:1
so has part: feature:309228-309584:1:exon

WP_015898977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309228-309584:1:exon

PERMA_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01685
old locus tag: PERMA_0340
so part of: sequence
location: 309692..311515
location: region:309692-311515:1
so has part: feature:309692-311515:1:exon
subclass of: SO_0000010

position:309692:1
position: 309692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311515:1
position: 311515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309692-311515:1:exon

PERMA_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01685
old locus tag: PERMA_0340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675103.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper-translocating P-type ATPase
translation: MLTLDNLLILILASVVQFYAGWEFYSSAFSGIKNRIADMNLLIAIGTSAAYFYSVLVMFLPFLFPEDMRYLYFDGAAAIITFVLLGRYLEIRSRSKASEFMKKLLSLKPQMARIIVDRKELEIPAENVVVGDIVVVRPGEKIPVDGVVVEGECEVDQSMITGEPLPVLKKEGDTVIGGTVNRTGVIKVKALKTGRDTVLFQIIKLLSEAQGKKPPIGRLADRITAYFVPLVLIFSVVVFDLWYLIGNDIQLGFIASVSVLIIACPCALGLATPIAVVVSVGRGAKEGMLIKNPEIVETVGRVNIAVFDKTGTLTEGKPSVTDSKVYKQDFLGYISALLKNSNHPLSRAVYEYIGDTEGEVKDFQQVAGKGVKGVVNGKTVVVGNLRFLKESGVNTENISKGDQTVVYGAVDGEVVAEFYISDRLRDEAFYVVKKLKERGIKTVLLTGDSKKVAEKIGEELGIDTVYGELMPEEKYRIVEKLQNEGNVVMFVGDGINDAPSMGKADVGIAVSGATDIAREAGDILLLKNDLRLVIKGIKLSEETLKIIKQNLFWAYIYNMLGIPVAGGILYPFTGFLLKPVFAGIAMSFSSVSVVSNALRLQFKKLGE
SIO_010081: PERMA_RS01685
subclass of: SO_0000673
so part of: PERMA_RS01685
location: 309692..311515
location: region:309692-311515:1
so has part: feature:309692-311515:1:exon

WP_012676245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309692-311515:1:exon

PERMA_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01690
old locus tag: PERMA_0341
so part of: sequence
location: 311517..312230
location: region:311517-312230:1
so has part: feature:311517-312230:1:exon
subclass of: SO_0000010

position:311517:1
position: 311517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312230:1
position: 312230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311517-312230:1:exon

PERMA_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01690
old locus tag: PERMA_0341
inference: COORDINATES: protein motif:HMM:NF015000.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerophosphodiester phosphodiesterase
translation: MDILKTLSRKPFSVVGHRGAKGRRPENTVSAIKFAIDCGADIVEVDVRSTRDGELILLHDPDFKRVSGKEISPSQLDFRSIRESITVYGEPVATLDEALETVKDKICIFVEIKEIDTVEKVMDRIRTFKCENQTAVISFYEEALSRVKEINPQITTGLIYAKPPGKIIEAKKLKADIVLPGYWLATEKAVSFAHRMGLKVVSWVINDEEHLRLAVSRKIDAVATDYPDLIVKLREKF
SIO_010081: PERMA_RS01690
subclass of: SO_0000673
so part of: PERMA_RS01690
location: 311517..312230
location: region:311517-312230:1
so has part: feature:311517-312230:1:exon

WP_012675356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311517-312230:1:exon

PERMA_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01695
old locus tag: PERMA_0342
so part of: sequence
location: 312273..313418
location: region:312273-313418:1
so has part: feature:312273-313418:1:exon
subclass of: SO_0000010

position:312273:1
position: 312273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313418:1
position: 313418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312273-313418:1:exon

PERMA_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01695
old locus tag: PERMA_0342
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460163.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--glyoxylate aminotransferase family protein
translation: MFIKERLFTPGPVPLPPQVIKALGQQIIHHRTPEFTQIFLEARENLQKLLKTERDVIMFASSGTGAMEASVANFFRKGDRVLIINAGKFGQRWKELASVYQLKIVDYEIEWGKTYDKERILQIISEFPDIKGIFVQHSETSTTTYHDVKYLGDIAKKLDDCLLVVDGITSVGVYQVYPEELGIDVLVTGSQKALMLPPGLSVLYFSEKAEERASKSDMPRYYFDVLKEAKKQSKGQTAYTPAINLIIALNESLKLILGEGLDNLEERHRIMAEATREAVKEIGLKLLSESPSNSATGVYSPAGIDADQLRKELLKLGFRVAGGQDHLKGKIFRIAHMGYFDFMDVVQVIAGLEMALKRIGYEIEIGKGVRKAQEVILENLG
SIO_010081: PERMA_RS01695
subclass of: SO_0000673
so part of: PERMA_RS01695
location: 312273..313418
location: region:312273-313418:1
so has part: feature:312273-313418:1:exon

WP_012676496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312273-313418:1:exon

PERMA_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01700
old locus tag: PERMA_0343
so part of: sequence
location: 313436..314074
location: region:313436-314074:1
so has part: feature:313436-314074:1:exon
subclass of: SO_0000010

position:313436:1
position: 313436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314074:1
position: 314074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313436-314074:1:exon

PERMA_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01700
old locus tag: PERMA_0343
EC number: 3.1.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008289346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine phosphatase family protein
translation: MAVRIIYVRHAESLWNPIGKYQGRLDPELSERGHKQAELLAKILKKYEPSALYSSPLKRTYMTAEYISKELDLPINIDEDIIEIDHGEWSGMLVEEVKEKYPDLFRQWLYEPETIKFPHGETLIDVYNRVKRFQERMLEKHEGETIIAVSHTVPIRASFVAGLDLPLAKFWSFGCDNASYSILDYEKVRPILYKLNNTYFLGDLFIPALDAL
SIO_010081: PERMA_RS01700
subclass of: SO_0000673
so part of: PERMA_RS01700
location: 313436..314074
location: region:313436-314074:1
so has part: feature:313436-314074:1:exon

WP_012675625.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:313436-314074:1:exon

PERMA_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: hisZ
locus tag: PERMA_RS01705
old locus tag: PERMA_0344
so part of: sequence
location: 314085..315344
location: region:314085-315344:1
so has part: feature:314085-315344:1:exon
subclass of: SO_0000010

position:314085:1
position: 314085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315344:1
position: 315344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314085-315344:1:exon

PERMA_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: hisZ
locus tag: PERMA_RS01705
old locus tag: PERMA_0344
inference: COORDINATES: protein motif:HMM:TIGR00443.1
GO function: GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]; GO:0030234 - enzyme regulator activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP phosphoribosyltransferase regulatory subunit
translation: MNIDIPAGVRVYNRIETSQIKYIQDRISEIFERWGYEEITLPSFEFFSVHSRGFGEEIENRAFKFIDRNSGEILTLRADFTSQIARYFASLKKKTVPKRYYYSGDIFRYVIPKADRLWERKQMGVELIGVKELEADAEVIAVAVQSLENLGIKNYQIDINNVKIFDTVKDLLGLDRESFITFMDYVRKREVYSIERFISDFDVEDRLKEFVVRIPEIQGDITVIQNLKEELKDFPELIKSLESIEKVYNILSDYGISDRVIFDIGEPKEFSYYTGIVFEIFIRDYSRPIGQGGRYDSLISKYDGNIPATGFAFDLLNIWEYMKLSGRIHEIKKKDFFIIDLTREKRSAYRIGKILREKGYSVGRDIVKREFKKSLEFAFEEGYSKAIVIGLDSTEKDIYIYSSMDSFEKLNLEEFLRKI
SIO_010081: PERMA_RS01705
subclass of: SO_0000673
so part of: PERMA_RS01705
location: 314085..315344
location: region:314085-315344:1
so has part: feature:314085-315344:1:exon

WP_012676415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314085-315344:1:exon

PERMA_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01710
old locus tag: PERMA_0345
so part of: sequence
location: 315384..315872
location: region:315384-315872:1
so has part: feature:315384-315872:1:exon
subclass of: SO_0000010

position:315384:1
position: 315384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315872:1
position: 315872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315384-315872:1:exon

PERMA_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01710
old locus tag: PERMA_0345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008286875.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidylprolyl isomerase
translation: MKATSNKVVSFHYTLKDKETGEVLDSSQVHGQPLTVLFGANNIIPGLESRMEGMEVGETRTIEVPAAEAYGEKDPNLIQQAPREYFQGVELEKGLPLQAQTPEGQIINMIVVDFDENTVTVDLNHPLAGKDLIFKVEVTDVRDASLEEIKHGHAHGEGGHHH
SIO_010081: PERMA_RS01710
subclass of: SO_0000673
so part of: PERMA_RS01710
location: 315384..315872
location: region:315384-315872:1
so has part: feature:315384-315872:1:exon

WP_012675773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315384-315872:1:exon

PERMA_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01715
old locus tag: PERMA_0346
so part of: sequence
location: complement(315888..317024)
location: region:315888-317024:-1
so has part: feature:315888-317024:-1:exon
subclass of: SO_0000010

position:315888:-1
position: 315888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317024:-1
position: 317024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315888-317024:-1:exon

PERMA_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01715
old locus tag: PERMA_0346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459506.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0008152 - metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KamA family radical SAM protein
translation: MNFLPERYWQRFDLWKDIDENLWNNWKWQLKNRIKSIQELEKVFSIDKKKKEIFQKVSPVFHFGTTPYYISLVKKPDYTDPVFRQIFPSFEEIDPDIQNNGSNDPFNEERSPVEGITHRYPDRVLFRVTTFCSVYCRHCMRKRNFIYGERAKSKKDIDIMIEYIRKNRSIREVLISGGDPLTLPNKKLDYILGRLQGIKHVDIIRIGSREPVVNPFRFYDENLLELFERYDKLWIVTHFNHPNEITQETKKAVKNILSTGTPVLNQTVLLKGINDDKYIIEELMRSLLRVKIKPYYLFFCDPTKGVLHFRTDIKKGIEIMEYLRGRLSGLGIPTYAVDLPEGKGKVPLLPEYIVEINDKSTVFRNYEGEIVKTDIKWG
SIO_010081: PERMA_RS01715
subclass of: SO_0000673
so part of: PERMA_RS01715
location: complement(315888..317024)
location: region:315888-317024:-1
so has part: feature:315888-317024:-1:exon

WP_012676893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315888-317024:-1:exon

PERMA_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01720
old locus tag: PERMA_0347
so part of: sequence
location: complement(317025..317435)
location: region:317025-317435:-1
so has part: feature:317025-317435:-1:exon
subclass of: SO_0000010

position:317025:-1
position: 317025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317435:-1
position: 317435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317025-317435:-1:exon

PERMA_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01720
old locus tag: PERMA_0347
inference: COORDINATES: protein motif:HMM:NF021505.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2231 domain-containing protein
translation: MELNLVHAFFGRFGVLIPLLGLFFEIGALISHKDILFKFSGYLVILGSILALLAGFTGFIEYNYLKAASENINRFSFHIVTGTLLTGLFLLILALRSYLLVRDNERIATVYIFLYLTTVITNLISNEIIIHTLRGE
SIO_010081: PERMA_RS01720
subclass of: SO_0000673
so part of: PERMA_RS01720
location: complement(317025..317435)
location: region:317025-317435:-1
so has part: feature:317025-317435:-1:exon

WP_012675947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317025-317435:-1:exon

PERMA_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01725
old locus tag: PERMA_0349
so part of: sequence
location: 317513..317953
location: region:317513-317953:1
so has part: feature:317513-317953:1:exon
subclass of: SO_0000010

position:317513:1
position: 317513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317953:1
position: 317953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317513-317953:1:exon

PERMA_RS01725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01725
old locus tag: PERMA_0349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012964016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR00725 family protein
translation: MKQVTVIGGSQVNRNSDEYIFAYKLGKLLAENGCIVVCGGRTGVMEAVCKGAKESGGTTVGIMPSYEGYEANPYVDIKINTGMNWNRNPIVVASGDPVIAVGGNYGTLSEIAYAFILGKRVLGYKTHKIEGIITVNKPEDVLEFLR
SIO_010081: PERMA_RS01725
subclass of: SO_0000673
so part of: PERMA_RS01725
location: 317513..317953
location: region:317513-317953:1
so has part: feature:317513-317953:1:exon

WP_012675940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:317513-317953:1:exon

PERMA_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01730
so part of: sequence
location: complement(317955..318029)
location: region:317955-318029:-1
so has part: feature:317955-318029:-1:exon
subclass of: SO_0000663

position:317955:-1
position: 317955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318029:-1
position: 318029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317955-318029:-1:exon

PERMA_RS01730
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 123214
locus tag: PERMA_RS01730
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(317991..317993),aa:Glu,seq:ttc)
SIO_010081: PERMA_RS01730
subclass of: SO_0000673
so part of: PERMA_RS01730
location: complement(317955..318029)
location: region:317955-318029:-1
so has part: feature:317955-318029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317955-318029:-1:exon

PERMA_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01735
so part of: sequence
location: complement(318031..318106)
location: region:318031-318106:-1
so has part: feature:318031-318106:-1:exon
subclass of: SO_0000663

position:318031:-1
position: 318031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318106:-1
position: 318106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318031-318106:-1:exon

PERMA_RS01735
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 123214
locus tag: PERMA_RS01735
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(318071..318073),aa:Lys,seq:ttt)
SIO_010081: PERMA_RS01735
subclass of: SO_0000673
so part of: PERMA_RS01735
location: complement(318031..318106)
location: region:318031-318106:-1
so has part: feature:318031-318106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318031-318106:-1:exon

PERMA_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: hypA
locus tag: PERMA_RS01740
old locus tag: PERMA_0350
so part of: sequence
location: 318199..318552
location: region:318199-318552:1
so has part: feature:318199-318552:1:exon
subclass of: SO_0000010

position:318199:1
position: 318199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318552:1
position: 318552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318199-318552:1:exon

PERMA_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: hypA
locus tag: PERMA_RS01740
old locus tag: PERMA_0350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673736.1
GO function: GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydrogenase maturation nickel metallochaperone HypA
translation: MFILHEFSIVQSLLDLIEKNVRENNGKYVTKVVVKIGKMSGVEPHLLKIAFDTFKEGTVCEKARMEMIVQDVIARCKSCGKEFTVDNYSFVCPGCEGTDIDIVDGEDMYLISLEMEV
SIO_010081: PERMA_RS01740
subclass of: SO_0000673
so part of: PERMA_RS01740
location: 318199..318552
location: region:318199-318552:1
so has part: feature:318199-318552:1:exon

WP_238527224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318199-318552:1:exon

PERMA_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01745
old locus tag: PERMA_0351
so part of: sequence
location: complement(318553..319968)
location: region:318553-319968:-1
so has part: feature:318553-319968:-1:exon
subclass of: SO_0000010

position:318553:-1
position: 318553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319968:-1
position: 319968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318553-319968:-1:exon

PERMA_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01745
old locus tag: PERMA_0351
inference: COORDINATES: protein motif:HMM:NF024211.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MKKFSDFPLIREKNDLLRFKLFRSTFGNVKFLNILRASLLLLTLYAIFFGLIHPDRKENIFTTALFWGLFWPFFMVITLPTVGNFFCMVCPHGFLSRKLSKSGLKLNLPKGLKNPYIGLGLNIILYWFILYTFPGVLREPLVTALFFLFFTLLAIAVSLIFTNGAYCRYFCPIGRVAPAFARVGFTWLSTYNRELCDSKCDKPDCAFACPYKLSPLKFDKNNSMDTCTLCMECANSCEGVKLSVRRWSHSLLKKIPKPQSWEVWVYIILLAVITITMRFHHGLGHSPVKESLPWVIIGKWLQETTGIGKPFDFVGLTALIMALLITLSLVLGGFYLTSRIINRSYRDVFLNLGYALAPLMIVGSLSHVCHFFFTHYYHEVINGFAQAFFLDFRVEPLADRKDTWLRIFNIFPFIAAFWSGYIMWRRLGFFEVKGFKKIVSYILSSGIIIFYLGLTVFILYVRYFGHTGHHH
SIO_010081: PERMA_RS01745
subclass of: SO_0000673
so part of: PERMA_RS01745
location: complement(318553..319968)
location: region:318553-319968:-1
so has part: feature:318553-319968:-1:exon

WP_012675204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318553-319968:-1:exon

PERMA_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01750
old locus tag: PERMA_0352
so part of: sequence
location: complement(319985..322117)
location: region:319985-322117:-1
so has part: feature:319985-322117:-1:exon
subclass of: SO_0000010

position:319985:-1
position: 319985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322117:-1
position: 322117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319985-322117:-1:exon

PERMA_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01750
old locus tag: PERMA_0352
inference: COORDINATES: protein motif:HMM:NF012801.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MRKGLPLLSALLITGLVSAQEVIKLEKTQITATRVERAELDIPAGVETVTKEEIEMERQYNISEVLEGLPGVQATTKNGGYDVRLIIRGGGLKAPYAVREINILLDGVPITDPDGLTRLDFVDPQLLEQIDIVKGPNSTLYGANSAGGVVNFITINPFKFQGFKVRAGYGNYGTYMYRLLYGGNNGRGLFYNTSISYRKSDSWREWNRFETFQTTTKLGWLIDDSSSFETTVSFTKSDLQLPGSLDKDEFEQDPSQQTSSPWRRSGRYSRIFFWSNRYTNEISENLTLKGTVYLQRWTHYHPVFGRVNDGGSYVGGIDAQIELKHKLFGKDSLLITGIQGRYDHYNSKRYTYQLCKLINGDIDYCSNATADNQIEYVLTDDRGLLYDDQKNRNYSLGVFAQETLKPTRKTIVDLGIRIDTVKFDIEKVSYFDLDYVYNRTYRYYGPYYIKYTSPIKEKASKTWNYISPRVGVVYKWTPDLSTYATVSTGFQTPQDSELLVNPDLDASNTVNYEAGLKAAGSRFYLSSAVYFMVTENEIVRTYTAEGDRMYLNAGKTHKKGFELDAKLKVLKGVFIGGSYTYYDFKYKTFVYTDSDGNRYDYSGNKMHYIPDYMYSLYTVGKLPAGFKFRIELNTWGSYYADDANTEKYSDYKNITNVMIGYEKGDKFEISLDIRNLFDKKYASQYLKTDWGYNIYPAPPRTYMLRASYKF
SIO_010081: PERMA_RS01750
subclass of: SO_0000673
so part of: PERMA_RS01750
location: complement(319985..322117)
location: region:319985-322117:-1
so has part: feature:319985-322117:-1:exon

WP_012676268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319985-322117:-1:exon

PERMA_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01755
old locus tag: PERMA_0353
so part of: sequence
location: complement(322303..322854)
location: region:322303-322854:-1
so has part: feature:322303-322854:-1:exon
subclass of: SO_0000010

position:322303:-1
position: 322303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322854:-1
position: 322854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322303-322854:-1:exon

PERMA_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01755
old locus tag: PERMA_0353
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKITQEAYIKELTDFIKEKTGINRFLSSKEKSLIKKFYSENIPLERLKKIIESEIISYPQSKRKKFSVLSIEKKLSHQKNSPPQRKIRSEEESNNRWKKVIERLNIPPEILNVEKVESAFRDFEIERRVVSYLWKNLPENEKKKLQEEAKREIKKKFVAQNIDPKKVIKSLIYTKLKKIYNI
SIO_010081: PERMA_RS01755
subclass of: SO_0000673
so part of: PERMA_RS01755
location: complement(322303..322854)
location: region:322303-322854:-1
so has part: feature:322303-322854:-1:exon

WP_012675416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322303-322854:-1:exon

PERMA_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: lpxI
locus tag: PERMA_RS01760
old locus tag: PERMA_0354
so part of: sequence
location: complement(322864..323670)
location: region:322864-323670:-1
so has part: feature:322864-323670:-1:exon
subclass of: SO_0000010

position:322864:-1
position: 322864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323670:-1
position: 323670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322864-323670:-1:exon

PERMA_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: lpxI
locus tag: PERMA_RS01760
old locus tag: PERMA_0354
EC number: 3.6.1.54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545647.1
note: LpxI, functionally equivalent to LpxH, replaces it in LPS biosynthesis in a minority of bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-2,3-diacylglucosamine diphosphatase LpxI
translation: MRKVGLIAGSGELPLEFARSASEKGIHVTVLAIKKTTDRNIEKYGKTHWLNFGEAQKLIDLLKKEGIKDLVMLGKIEHYSLIFSLHKLDKRAREFFSKLKDKRAKTILEAVMDELSKEGFSFIDPTPYLENLLIEEGLIAGRIEDKRLMNDALFGLKIAKEIAQLDIGQTVVVKDGIVIAVEGIEGTDKCIIRGGELGGEGTVVCKVARKNQDMRYDVPVIGTKTLKSMKKAKARLLAVEAGKTFLLEREKFKKLAEKFGIAVIGFRI
SIO_010081: PERMA_RS01760
subclass of: SO_0000673
so part of: PERMA_RS01760
location: complement(322864..323670)
location: region:322864-323670:-1
so has part: feature:322864-323670:-1:exon

WP_012676548.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322864-323670:-1:exon

PERMA_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: lpxA
locus tag: PERMA_RS01765
old locus tag: PERMA_0355
so part of: sequence
location: complement(323667..324464)
location: region:323667-324464:-1
so has part: feature:323667-324464:-1:exon
subclass of: SO_0000010

position:323667:-1
position: 323667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324464:-1
position: 324464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323667-324464:-1:exon

PERMA_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: lpxA
locus tag: PERMA_RS01765
old locus tag: PERMA_0355
EC number: 2.3.1.129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459100.1
GO function: GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
GO process: GO:0008610 - lipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
translation: MSVEIHPTSIVSPKAKLGVNVKIGPFCVIEEDVEIGDNTELESHVSVKRYTTIGSDCKIHEGSVIGGIPQHLGFKGEETYVRIGNNVTIREYVTIHRGTSFDDGITKIDDNSYLMAYVHIAHDCKVGHDTILANAVTLAGHVKIGNYVFIGGLTPIHQFCRVGDYAMVGGASAVDKDIPPYTRAAKNHVLLYGLNLVGLRRRGFSSEQIKILKEAYRILFRKSATIQEGIKEVEEKLPSTPEIQNLIEFVKTSKRGIAPEASKRG
SIO_010081: PERMA_RS01765
subclass of: SO_0000673
so part of: PERMA_RS01765
location: complement(323667..324464)
location: region:323667-324464:-1
so has part: feature:323667-324464:-1:exon

WP_012676716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323667-324464:-1:exon

PERMA_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: trxA
locus tag: PERMA_RS01770
old locus tag: PERMA_0356
so part of: sequence
location: complement(324474..324791)
location: region:324474-324791:-1
so has part: feature:324474-324791:-1:exon
subclass of: SO_0000010

position:324474:-1
position: 324474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324791:-1
position: 324791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324474-324791:-1:exon

PERMA_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: trxA
locus tag: PERMA_RS01770
old locus tag: PERMA_0356
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008289159.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin
translation: MAGKVCIVNESNWEQEVLNSELPVLVDFWAPWCGPCRLIAPVIEELAEELEGKAKICKLNTDENPNIAMKYGIRAIPTIMVFKNGQVVDTKVGVQPKEVLKSLLV
SIO_010081: PERMA_RS01770
subclass of: SO_0000673
so part of: PERMA_RS01770
location: complement(324474..324791)
location: region:324474-324791:-1
so has part: feature:324474-324791:-1:exon

WP_012675724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324474-324791:-1:exon

PERMA_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01775
old locus tag: PERMA_0357
so part of: sequence
location: complement(324795..325106)
location: region:324795-325106:-1
so has part: feature:324795-325106:-1:exon
subclass of: SO_0000010

position:324795:-1
position: 324795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325106:-1
position: 325106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324795-325106:-1:exon

PERMA_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01775
old locus tag: PERMA_0357
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MMEEQTFENNRWQDEEFLEENADLLKALAHPSRLKIIGFLSSGKKCVKHIWEALDLPQPNVSQHLSVLRNKGILGYKREGSIVCYYIKNKKALEIYKLLLKED
SIO_010081: PERMA_RS01775
subclass of: SO_0000673
so part of: PERMA_RS01775
location: complement(324795..325106)
location: region:324795-325106:-1
so has part: feature:324795-325106:-1:exon

WP_012675464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324795-325106:-1:exon

PERMA_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01780
old locus tag: PERMA_0358
so part of: sequence
location: complement(325242..326126)
location: region:325242-326126:-1
so has part: feature:325242-326126:-1:exon
subclass of: SO_0000010

position:325242:-1
position: 325242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326126:-1
position: 326126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325242-326126:-1:exon

PERMA_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01780
old locus tag: PERMA_0358
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545651.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein
translation: MAELKYAFYTGCSAKGVAPELYNSTKLVAEKLGMELIELEAATCCGAGAVQEKDEFLALTINARNLALAEELGLDLLTICNTCTVMLRETKFKLDNDPELKDAVNEVLKEAGLEYKGTSEVTHFLWELIDGVGLDKIKEMVVRPLKEFKIAPFYGCHIIRPPYLIGYEDPDNPKSIEMLIEALGGNPTDHEAKLACCGFHSFWSAEEKVTLKLTAMDAESAKREKADFMVTPCPLCHTQLDAMQPEAEERMGTQIGMPVLHLPQMIGLAIGFKPEELGLNKHIVSTADIIQKVA
SIO_010081: PERMA_RS01780
subclass of: SO_0000673
so part of: PERMA_RS01780
location: complement(325242..326126)
location: region:325242-326126:-1
so has part: feature:325242-326126:-1:exon

WP_012676592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325242-326126:-1:exon

PERMA_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01785
old locus tag: PERMA_0359
so part of: sequence
location: complement(326126..327190)
location: region:326126-327190:-1
so has part: feature:326126-327190:-1:exon
subclass of: SO_0000010

position:327190:-1
position: 327190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326126-327190:-1:exon

PERMA_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01785
old locus tag: PERMA_0359
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459102.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: succinate dehydrogenase/fumarate reductase iron-sulfur subunit
translation: MEKFKLRIFRYDPTKDTNPYYKTYELPVEKGMTVLAALFKAKEEQDPSISFRYNCRAAICGSCAVRINGHATLACKVQVTHILQKYETDTITVDPIGNVRPLKDLIYDMDWLVDKLKRIKPWFIPKEPPPSDGTEYRQDPYDHHRIDFASDCILCASCMSDCNALKANKDYHGPMVLSKAYRFAADTRDGAKEERLDAVLDDLNLEWCVRCWECTTRCPKEVQPFENIIRLRIMAAEEGYKTPGEIHAEIFEKDILNRGLLNEMLLPMKQEGILGAIKRAPFGIRMMVKGKVNFADFFGGHKIKRLEEVQKIYEKAKEKEKEVKIKLPQIMGVVYEDKRKTRKRANFTETGGNE
SIO_010081: PERMA_RS01785
subclass of: SO_0000673
so part of: PERMA_RS01785
location: complement(326126..327190)
location: region:326126-327190:-1
so has part: feature:326126-327190:-1:exon

WP_012675215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326126-327190:-1:exon

PERMA_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: queF
locus tag: PERMA_RS01790
old locus tag: PERMA_0360
so part of: sequence
location: complement(327330..327716)
location: region:327330-327716:-1
so has part: feature:327330-327716:-1:exon
subclass of: SO_0000010

position:327330:-1
position: 327330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327716:-1
position: 327716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327330-327716:-1:exon

PERMA_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: queF
locus tag: PERMA_RS01790
old locus tag: PERMA_0360
EC number: 1.7.1.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012514222.1
GO function: GO:0033739 - preQ1 synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preQ(1) synthase
translation: MSGELKYGEKEIQEAKLEVWPNPNPEKNYTINITFPEFTCLCPRSGYPDFATIKITYVPDQYIVELKSLKLYLNKYRNQYISHEEATNKIYDDLYNLLKPRFLEVIGDWNPRGNVKTVIKISSEEQGK
SIO_010081: PERMA_RS01790
subclass of: SO_0000673
so part of: PERMA_RS01790
location: complement(327330..327716)
location: region:327330-327716:-1
so has part: feature:327330-327716:-1:exon

WP_012676591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327330-327716:-1:exon

PERMA_RS01795
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01795
old locus tag: PERMA_0361
so part of: sequence
location: complement(327718..328590)
location: region:327718-328590:-1
so has part: feature:327718-328590:-1:exon
subclass of: SO_0000010

position:327718:-1
position: 327718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328590:-1
position: 328590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327718-328590:-1:exon

PERMA_RS01795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01795
old locus tag: PERMA_0361
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459548.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyprenyl synthetase family protein
translation: MDVKHFLAKQSVFINEQIKRLTPSGIPEKLFDAMAYSLSAGGKRLRPILVLESAKAVGMEDIKDIVDIAVATEFIHTYSLIHDDLPAMDDDELRRGKPTCHIVYGEAIAILAGDGLQSYAFELISKNRTVPPDKLLKVINILSHGTGIYGMVGGQAADILHEKENSFNDINFIHTHKTAKFIQSCCQMGGVLADATEEEEISLKNYGLYIGLAFQIQDDILDEIGDEKKLGKKTKKDRDKNKLTYPSIYGIEESKRIAREYVEKAVSEVEKLKRPEILIEIAKFIINREV
SIO_010081: PERMA_RS01795
subclass of: SO_0000673
so part of: PERMA_RS01795
location: complement(327718..328590)
location: region:327718-328590:-1
so has part: feature:327718-328590:-1:exon

WP_012676537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327718-328590:-1:exon

PERMA_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01800
old locus tag: PERMA_0362
so part of: sequence
location: complement(328591..328941)
location: region:328591-328941:-1
so has part: feature:328591-328941:-1:exon
subclass of: SO_0000010

position:328591:-1
position: 328591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328941:-1
position: 328941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328591-328941:-1:exon

PERMA_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01800
old locus tag: PERMA_0362
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676892.1
GO function: GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YraN family protein
translation: MFSWIKGKEGEDKAVEYLRNSGYRILERNFRSRFGEIDIIAEDNGTIVIVEVRSKGSTGYGYPEESIDHKKVRKIIKTAQFYLLKRDIKGKQVRFDIISIVNNNIFHIKNAFDLDY
SIO_010081: PERMA_RS01800
subclass of: SO_0000673
so part of: PERMA_RS01800
location: complement(328591..328941)
location: region:328591-328941:-1
so has part: feature:328591-328941:-1:exon

WP_012676892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328591-328941:-1:exon

PERMA_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01805
old locus tag: PERMA_0363
so part of: sequence
location: complement(328950..329570)
location: region:328950-329570:-1
so has part: feature:328950-329570:-1:exon
subclass of: SO_0000010

position:328950:-1
position: 328950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329570:-1
position: 329570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328950-329570:-1:exon

PERMA_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01805
old locus tag: PERMA_0363
EC number: 3.1.26.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881273.1
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HII
translation: MQKKTSRCMLQIEKELWSKGFKNIAGIDEAGRGPVAGPVVAASVIFPQNIEPFIFKDSKKLTKKQREELFTQIKERALAVGIGIVDNSVIDRINIYNATKLAMKRAIEDMNHNFDYLITDYVKFDPYPHISLKKADEKSLSVAAASIIAKVFRDRIMEEFSKYYPHSFDKHKGYLTELHREEIIRYGLTPIHRKSFKIDIQYRLNI
SIO_010081: PERMA_RS01805
subclass of: SO_0000673
so part of: PERMA_RS01805
location: complement(328950..329570)
location: region:328950-329570:-1
so has part: feature:328950-329570:-1:exon

WP_238527241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328950-329570:-1:exon

PERMA_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rplS
locus tag: PERMA_RS01810
old locus tag: PERMA_0364
so part of: sequence
location: complement(329551..329949)
location: region:329551-329949:-1
so has part: feature:329551-329949:-1:exon
subclass of: SO_0000010

position:329551:-1
position: 329551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329949:-1
position: 329949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329551-329949:-1:exon

PERMA_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rplS
locus tag: PERMA_RS01810
old locus tag: PERMA_0364
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015898869.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L19
translation: MNALIREIEQAYMPKNFPEFRVGDTVRVHVKVKERNKERIQVFEGVVIRIKGSGTGKTFTVRKESYGVGIERIFPFACPSIDKVEVTKRGKVRRAKLYYLRERRGKAARIREIKEWEIRKRAEESKAAKENQ
SIO_010081: PERMA_RS01810
subclass of: SO_0000673
so part of: PERMA_RS01810
location: complement(329551..329949)
location: region:329551-329949:-1
so has part: feature:329551-329949:-1:exon

WP_015898869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329551-329949:-1:exon

PERMA_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01815
old locus tag: PERMA_0365
so part of: sequence
location: complement(330015..330497)
location: region:330015-330497:-1
so has part: feature:330015-330497:-1:exon
subclass of: SO_0000010

position:330015:-1
position: 330015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330497:-1
position: 330497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330015-330497:-1:exon

PERMA_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01815
old locus tag: PERMA_0365
EC number: 1.11.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin
translation: MVKEGDKAPDFCLEGLDPEGNEKEVCLKDLLSEGKYLVLYFYPKDNTPGCTTEACDFRDNLNVIGDKAVVAGVSPDSIKSHKKFKEKYGLNFYLLSDPEKNVLQLYDAYGEKKMYGKVTKGVIRSTYIISPEGKIVKKWKNVKAKGHVQKVVEELERLIG
SIO_010081: PERMA_RS01815
subclass of: SO_0000673
so part of: PERMA_RS01815
location: complement(330015..330497)
location: region:330015-330497:-1
so has part: feature:330015-330497:-1:exon

WP_015899033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330015-330497:-1:exon

PERMA_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: hisIE
locus tag: PERMA_RS01820
old locus tag: PERMA_0366
so part of: sequence
location: complement(330509..331129)
location: region:330509-331129:-1
so has part: feature:330509-331129:-1:exon
subclass of: SO_0000010

position:330509:-1
position: 330509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331129:-1
position: 331129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330509-331129:-1:exon

PERMA_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: hisIE
locus tag: PERMA_RS01820
old locus tag: PERMA_0366
EC number: 3.5.4.19
EC number: 3.6.1.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547147.1
GO function: GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO process: GO:0000105 - histidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
translation: MNIDQIRFDEKGLVPVITQSYYSGKVLMQAYANREAILKTVETGFATYYSRSRNELWIKGETSGNKQRVVDIRVDCDGDSVLYLVVDYGVACHTGKESCFYRDIDFKEKEKPDPYEILHALYKKIEERKEKRPEGSYVAKLFSKGSDKIIQKVGEEAVETVIALKNRDKNEIVYEASDLVFHLLIALVDSGVKLEDIQEELLKRYK
SIO_010081: PERMA_RS01820
subclass of: SO_0000673
so part of: PERMA_RS01820
location: complement(330509..331129)
location: region:330509-331129:-1
so has part: feature:330509-331129:-1:exon

WP_041530984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330509-331129:-1:exon

PERMA_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: dxs
locus tag: PERMA_RS01825
old locus tag: PERMA_0368
so part of: sequence
location: 331225..333120
location: region:331225-333120:1
so has part: feature:331225-333120:1:exon
subclass of: SO_0000010

position:331225:1
position: 331225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333120:1
position: 333120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331225-333120:1:exon

PERMA_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: dxs
locus tag: PERMA_RS01825
old locus tag: PERMA_0368
EC number: 2.2.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880536.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO process: GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 1-deoxy-D-xylulose-5-phosphate synthase
translation: MKEFRVLDRVEDFRDLKDLSEEELKLLAQDIREYIIDVTSKNGGHIGPSLGVVELTIALLRAFNPEVDRIIWDIGHQAYSYKILTGRKEQFKTLRQYGGISGFLKIKESPYDHFGAGHSSTSISAALGMRVAKDLLKKEGYTIAVIGDGAMTAGQAFEGLNHAGWLDPSKFIVILNDNQMSISPNVGAIYTYFNKIITNEVYQRSRQKLKDVLKKVFGESGAKFARKLEEYAKGLFTPGVIFEELGFTYVGTIDGHSITDLEQTLNNVKKMRGPILVHVITQKGKGYKPAEENPTPFHGISPFDKITGVPIKKSVEKPSWSKAFGEALVELAEKDEKIVAITPAMREGSGLTEFSERFPDRFFDVGIAEQHAATFAAALSKEGMKPVASFYSTFLQRAYDQVVHDIAIQGLPVVLAIDRAGIVGEDGPTHHGVFDISFLRSVPDIVISAPKDWQELRDLLYTAVNSGKIFAIRYPRGTVTGDKKEGFSEIKIGSWEKISEGRDIAILAVGKYVQRAVQVKELLKKYGYNVTVINARFIRPMDIEILDETLRTHKYIITMEDGSLNGGFGSAVGEYILDNSYTNALLRFGIPDRFIGHGKIELLERDLGLLPEQMAEKIKEFISQENYKVVG
SIO_010081: PERMA_RS01825
subclass of: SO_0000673
so part of: PERMA_RS01825
location: 331225..333120
location: region:331225-333120:1
so has part: feature:331225-333120:1:exon

WP_012675826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331225-333120:1:exon

PERMA_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01830
old locus tag: PERMA_0367
so part of: sequence
location: complement(333117..333539)
location: region:333117-333539:-1
so has part: feature:333117-333539:-1:exon
subclass of: SO_0000010

position:333117:-1
position: 333117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333539:-1
position: 333539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333117-333539:-1:exon

PERMA_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01830
old locus tag: PERMA_0367
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459791.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2203 domain-containing protein
translation: MKYFSLHEANSILPQIKLLVDEIKDKRDKLYNVIESYEEEIENQNDELEIMYLKTEITMMNDEINELIDIIESFGAYVKGLDPFLVDFPSEYNGEQIYLCWQEGEEQIEYWHKASEGFAGRKHISLLSEQTGKDKNRLTP
SIO_010081: PERMA_RS01830
subclass of: SO_0000673
so part of: PERMA_RS01830
location: complement(333117..333539)
location: region:333117-333539:-1
so has part: feature:333117-333539:-1:exon

WP_012676748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333117-333539:-1:exon

PERMA_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01835
old locus tag: PERMA_0369
so part of: sequence
location: 333688..334275
location: region:333688-334275:1
so has part: feature:333688-334275:1:exon
subclass of: SO_0000010

position:333688:1
position: 333688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334275:1
position: 334275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333688-334275:1:exon

PERMA_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01835
old locus tag: PERMA_0369
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674036.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional nuclease family protein
translation: MIQVKVKNIGLDSLTGSPILILADINNEEDVYPIWIGVSEAEGIIIKQSGVETPRPLTYDLMKNIIESLGGKVKKVAIIDHKDNAYIAEIVIEKDGEEISIDSRPSDAINIALRFDAPIFLNEQVVKKVNIKELKEKEEEKEDIKTVEDLESYTEDQNEQNVEQDKELEEFRKLLENIKPEDFALKPDDKNKKRG
SIO_010081: PERMA_RS01835
subclass of: SO_0000673
so part of: PERMA_RS01835
location: 333688..334275
location: region:333688-334275:1
so has part: feature:333688-334275:1:exon

WP_012676133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:333688-334275:1:exon

PERMA_RS10435
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10435
old locus tag: PERMA_0370
so part of: sequence
location: complement(334287..335642)
location: region:334287-335642:-1
so has part: feature:334287-335642:-1:exon
subclass of: SO_0000010

position:334287:-1
position: 334287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335642:-1
position: 335642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334287-335642:-1:exon

PERMA_RS10435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10435
old locus tag: PERMA_0370
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MGKAVSFVVAGMIFSLTFISPSIGATRAELNKQLTEAISKEDIPKIKELIGKGAGVNIKNIIGNSPLHIASMKGDINLVKELIKSGADVNAKNLEGWTPLHEAAFFGYAQVIKLLLDNGAEIDAKNGNGNTPLHMAAMSGYPDAVEILIEYGADINEQNSEGWTPLHFAAYKGELETVKILVEKGAELNIKDKDEETPLHKSVSQRKFNVTKYLVEKGAYINARNKNGKTPLLIAISGVDEKTVNFLIQKGADINAKDNDGWTPLHEATFRGHIGFVKKLLEKGANVNARDNKYGDYVLHVVARNGNEEIAKLLLKNGAKVNVRDEYGNTPLHAASLEGHFKVAKLLIDHGADINAKNNKGWTPLFKAAMAGKIKVAILLLTKGADPNVKGKYKETPLHLAVLRRHTDMVKLLIKHGADVNAKDLRGKTPLDYAKVEEIKKILLKAKAQSR
SIO_010081: PERMA_RS10435
subclass of: SO_0000673
so part of: PERMA_RS10435
location: complement(334287..335642)
location: region:334287-335642:-1
so has part: feature:334287-335642:-1:exon

WP_049756059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334287-335642:-1:exon

PERMA_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01845
old locus tag: PERMA_0371
so part of: sequence
location: complement(335680..336486)
location: region:335680-336486:-1
so has part: feature:335680-336486:-1:exon
subclass of: SO_0000010

position:335680:-1
position: 335680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336486:-1
position: 336486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335680-336486:-1:exon

PERMA_RS01845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01845
old locus tag: PERMA_0371
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat-containing protein
translation: MLKKGYILSIFLLISVSLYVSIIKNPDGHLIYRSSAETREKLNRKLFEAIEAGDVDKVKELLDKGADVNARDKSNYTPLHKAVSKGKLEIVKLLIDRGADINAKESFFGYTPIHLAAIKGFPDILKYLIEKGADVNCRDKYGDTPLHLAALEGHEDIVKILIQNGADIHVKNNRRWTPLHKAALTGKVNVARILIEHGADVNVRGRSKETPLHLAVLRKQKKMVVFLIENGADVNAKDIRKRTPLDYAKIEDIKKILQSVGGKKGSDI
SIO_010081: PERMA_RS01845
subclass of: SO_0000673
so part of: PERMA_RS01845
location: complement(335680..336486)
location: region:335680-336486:-1
so has part: feature:335680-336486:-1:exon

WP_012675379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335680-336486:-1:exon

PERMA_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01850
old locus tag: PERMA_0372
so part of: sequence
location: complement(336488..337204)
location: region:336488-337204:-1
so has part: feature:336488-337204:-1:exon
subclass of: SO_0000010

position:336488:-1
position: 336488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337204:-1
position: 337204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336488-337204:-1:exon

PERMA_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01850
old locus tag: PERMA_0372
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MFPFFKSVRRFIFFPFILMSLIIYFNPAYSQSSTIEVLKKRLEKKVKKPPLNRAVSKGDIKLVKILLEKGEDPNSKDIIGWTPLHEAAFKGYTEIAKILIEAGADVNAKDNDGETPLHIASSEGHLDMVKFLIKHGADINARNKKGRTPLHYAARGGNLSVVKYLIKKGADVNALDDDRNTPLHEATARNRKDIVMILIANGADPTIKDKFGKKPEDYTEDPAILRILEKAEKEKGRK
SIO_010081: PERMA_RS01850
subclass of: SO_0000673
so part of: PERMA_RS01850
location: complement(336488..337204)
location: region:336488-337204:-1
so has part: feature:336488-337204:-1:exon

WP_015898888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336488-337204:-1:exon

PERMA_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01855
old locus tag: PERMA_0373
so part of: sequence
location: complement(337275..338288)
location: region:337275-338288:-1
so has part: feature:337275-338288:-1:exon
subclass of: SO_0000010

position:337275:-1
position: 337275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338288:-1
position: 338288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337275-338288:-1:exon

PERMA_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01855
old locus tag: PERMA_0373
EC number: 1.2.1.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546946.1
GO function: GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO process: GO:0008652 - amino acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aspartate-semialdehyde dehydrogenase
translation: MRYYNIAILGATGAVGQTMLRVLEERNFPVDEIRLLASPKSAGQELEYMGVKYKVQAVSPEAFEGIDIALFSAGGSRSKEWAPVAVEKGAVVIDNSSAFRMDDDVPLVVPEVNPEDVKWHKGIIANPNCSTIQMVVAINPIHRAKKIKNVFVSTYQAVSGAGATAIKDLEEETKAYFEGKYYYPEALPAHIAFNVIPHIDVFLDNDYTKEEMKMVNETRKIMHAPDIKVSPTCVRVPVFYGHSETVVIETEEPVTPEEAREILRSAPGVIVEDDPSNNVYPMPIDVAGKDEVFVGRIRKDFIFENGLSMWVVADNLRKGAATNAVQIAELLVEYELI
SIO_010081: PERMA_RS01855
subclass of: SO_0000673
so part of: PERMA_RS01855
location: complement(337275..338288)
location: region:337275-338288:-1
so has part: feature:337275-338288:-1:exon

WP_012676095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337275-338288:-1:exon

PERMA_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01860
old locus tag: PERMA_0374
so part of: sequence
location: 338349..338537
location: region:338349-338537:1
so has part: feature:338349-338537:1:exon
subclass of: SO_0000010

position:338349:1
position: 338349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338537:1
position: 338537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338349-338537:1:exon

PERMA_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01860
old locus tag: PERMA_0374
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKRNPFTAILILTGLMLLPFMAFLFDRFLLKLDNTFLIFAEMLILSLGVLSGFLIYIFFFK
SIO_010081: PERMA_RS01860
subclass of: SO_0000673
so part of: PERMA_RS01860
location: 338349..338537
location: region:338349-338537:1
so has part: feature:338349-338537:1:exon

WP_015899041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338349-338537:1:exon

PERMA_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ybgF
locus tag: PERMA_RS01865
old locus tag: PERMA_0375
so part of: sequence
location: 338547..339233
location: region:338547-339233:1
so has part: feature:338547-339233:1:exon
subclass of: SO_0000010

position:338547:1
position: 338547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339233:1
position: 339233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338547-339233:1:exon

PERMA_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ybgF
locus tag: PERMA_RS01865
old locus tag: PERMA_0375
inference: COORDINATES: protein motif:HMM:NF024915.2
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tol-pal system protein YbgF
translation: MKRIIYILPASFILFAGCVKKEDINLLQREIISLKKEVAQIREGQEEIKGSLNDLSKRVDNVSQIASKNSLEIEKIKLAQKPETVETIEKEGAEKVRIPDNPKELYKYALNAYYKGKTEEARKYFQIFVEEYPGSDMYDNALFWIGQTYYTEGDYEKAIEAFDRLINDCETGKAQECNKYPVAMLKKAYSYIKLGEIEEAKKLLKEIVRRFPDTEESELASRKLEVLE
SIO_010081: PERMA_RS01865
subclass of: SO_0000673
so part of: PERMA_RS01865
location: 338547..339233
location: region:338547-339233:1
so has part: feature:338547-339233:1:exon

WP_012675542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338547-339233:1:exon

PERMA_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01870
old locus tag: PERMA_0376
so part of: sequence
location: 339230..339931
location: region:339230-339931:1
so has part: feature:339230-339931:1:exon
subclass of: SO_0000010

position:339230:1
position: 339230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339931:1
position: 339931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339230-339931:1:exon

PERMA_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01870
old locus tag: PERMA_0376
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547203.1
GO function: GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: isoprenyl transferase
translation: MIDLLYKIPEHVAVIMDGNGRWAKRRGLPRVFGHREGAKAVERTLKIANDVGIKWLSVFAFSTENWGRPKEEVNAIMSLLVEYINTKVPHLVKDNIRLRFMGRRDGLPEMILESMYEGEKATEKCDGMNFVVALNYSGKAEIVDAVKKIISSGKREIDEEEFREYLYIPEMPEPDLLIRTSGEKRISNFMLWELAYTELYFTEVLWPDFNEEEFLKALYFYQSRERRFGKVTV
SIO_010081: PERMA_RS01870
subclass of: SO_0000673
so part of: PERMA_RS01870
location: 339230..339931
location: region:339230-339931:1
so has part: feature:339230-339931:1:exon

WP_012676369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339230-339931:1:exon

PERMA_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01875
old locus tag: PERMA_0378
so part of: sequence
location: 339928..340701
location: region:339928-340701:1
so has part: feature:339928-340701:1:exon
subclass of: SO_0000010

position:339928:1
position: 339928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340701:1
position: 340701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339928-340701:1:exon

PERMA_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01875
old locus tag: PERMA_0378
EC number: 2.7.7.41
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675095.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidate cytidylyltransferase
translation: MRELSLRIVSAVILAVIAISAVLYFPVWLFKTVVAVLSSIATWEVAHLLKKKYEEINPINAGIFGFFVSLSLLFFSPYLSVLLVFLYSFYYAHRVYDINYLTSYVFVYLYGVFFVSSLGLLHEMDRYLIFVLFATVWAGDTAAYFVGKAIGKHKFAPRLSPKKTWEGAVGSFFGSVTAGGVFAYYFQFYDAFIPILISAFLLQIGDLFESFIKRQVQEKDSSHLIPGHGGLLDRIDALIFAGMVFLVYYQLRIYINF
SIO_010081: PERMA_RS01875
subclass of: SO_0000673
so part of: PERMA_RS01875
location: 339928..340701
location: region:339928-340701:1
so has part: feature:339928-340701:1:exon

WP_015898873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339928-340701:1:exon

PERMA_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: mqnC
locus tag: PERMA_RS01880
old locus tag: PERMA_0377
so part of: sequence
location: complement(340698..341810)
location: region:340698-341810:-1
so has part: feature:340698-341810:-1:exon
subclass of: SO_0000010

position:340698:-1
position: 340698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341810:-1
position: 341810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340698-341810:-1:exon

PERMA_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: mqnC
locus tag: PERMA_RS01880
old locus tag: PERMA_0377
EC number: 1.21.98.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880478.1
GO process: GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cyclic dehypoxanthinyl futalosine synthase
translation: MEIYKTDLDLNTVIDKIIKGDRITEEEGLKLFKEADLLTLGRLADYVRRKKHPENIVTFVVDRNVNYTNVCVAGCKFCAFQTKKGSPDAYTLDFDQIYRKIEELVQWGGTTLLMQGGLNPDLRIDFYTDLFKGIKERFPDIQIHSLSASEIYYISKIEGIPIPEVLKILHQSGLDSLPGGGAEILSDEVRSKISSNKVSTQVWLEVHRSAHNLGMKTTATMMCGHIEEPEHIIEHLSHIRKLQDDSLKNKKGYFTAFIPWTFQKGGTRLDHIETATTVYYLKVLSISRIFLDNFDNIQSSHVTQTMKIGPVGLHFGANDLGSTMIEENVVASTGWKVASPRPEKMAKIIKEAGFRPAQRDTYYNIIRYFD
SIO_010081: PERMA_RS01880
subclass of: SO_0000673
so part of: PERMA_RS01880
location: complement(340698..341810)
location: region:340698-341810:-1
so has part: feature:340698-341810:-1:exon

WP_012676431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340698-341810:-1:exon

PERMA_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01885
old locus tag: PERMA_0379
so part of: sequence
location: complement(341877..342725)
location: region:341877-342725:-1
so has part: feature:341877-342725:-1:exon
subclass of: SO_0000010

position:341877:-1
position: 341877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342725:-1
position: 342725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341877-342725:-1:exon

PERMA_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01885
old locus tag: PERMA_0379
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKLILLLTAVFIFSCGGGGGSSEGELLVGYFYDSPVENLRYKTSSGVEGKTDSSGKFFYRKGDIIKFYAGNILIGEVTGDFIISPIDLFKGYKNDIRPDDPLILNLVSFFLYLDPDVTDFVITVDEDKLKNVTFNGMLTECIFKDECPQDIKDIISKNINLAGSHFQNSYKSIMDKLSGCYEGNLTVTEKTLETFCNVNNSSIKILIYSDGLIKGNLGDSSISGILSYKDLSIDIPSTFGISSTLEGKIDRNKISGEWGSIGCSGKFFLSKVDDDRCSDIQ
SIO_010081: PERMA_RS01885
subclass of: SO_0000673
so part of: PERMA_RS01885
location: complement(341877..342725)
location: region:341877-342725:-1
so has part: feature:341877-342725:-1:exon

WP_012676656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341877-342725:-1:exon

PERMA_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01890
old locus tag: PERMA_0380
so part of: sequence
location: 342821..344341
location: region:342821-344341:1
so has part: feature:342821-344341:1:exon
subclass of: SO_0000010

position:342821:1
position: 342821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344341:1
position: 344341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342821-344341:1:exon

PERMA_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01890
old locus tag: PERMA_0380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673553.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YifB family Mg chelatase-like AAA ATPase
translation: MLSVVKSGGVIGVDGYSVHVEVNISQGLPQFITVGLPDAAVKESKERVKSAINNIGISFPLRKIVVNLAPADILKQGTLYDLPIAVGILTASGQISQKILKDFAFVGELALDGSLRKIKGTLPIVLKLKEDGIRNVILPEENGKEGALVEGVNIYGFGSLKEIVEFLNGDIKTEPVKVNREDIFSSHSVYPDFSEIKGQYTVKRALEIAAAGFHNILMIGSPGSGKSMMAKAFPSIMPPLTFQEAIETTKIHSVAGVLDDFVIRERPFVVAHHTTSDVAVVGGGNIPKPGLVSLAHNGTFFMDELPEFKRNVLESLRQPIEDKVVTVSRASGSYTFPAKFQLIAAANPCPCGYRNDPNRECKCSPRDIKRYMGKLSGPVVDRIDMICWVSSVDPEDLSKMSTGESSSVIRERVMKAVDIQRERFKETGINFNSEMSPSMLEKFVKLDSSAENALLTATKKYRFTARSYHRILKLSRTIADLEGSDIVMLKHIVEAVNFKLSEDIYS
SIO_010081: PERMA_RS01890
subclass of: SO_0000673
so part of: PERMA_RS01890
location: 342821..344341
location: region:342821-344341:1
so has part: feature:342821-344341:1:exon

WP_012675286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342821-344341:1:exon

PERMA_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01895
old locus tag: PERMA_0381
so part of: sequence
location: 344365..345129
location: region:344365-345129:1
so has part: feature:344365-345129:1:exon
subclass of: SO_0000010

position:344365:1
position: 344365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345129:1
position: 345129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344365-345129:1:exon

PERMA_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01895
old locus tag: PERMA_0381
EC number: 3.6.1.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676789.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO process: GO:0016311 - dephosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: undecaprenyl-diphosphate phosphatase
translation: MGIIESIILGIVEGLTEFLPVSSTGHLILVSKLLGLEQTDAHKAFEVAIQSGAILAVVFLYREKLTHSIDLWKRLIIAFIPTGILGFLLYKIIKGLFSPYIVSIMLIVGGLVFIAVEFFYKKSEHQIDDILKIPYYKAFFIGVFQSIAMIPGTSRSGATIIGGLLLGLDRKTAAEFSFLLAVPTMFAATSYDIMKNYHHFHIENWIALLTGFVTAFVFAVLAIKLFIGFVSRYNFVPFGIYRIILGFIFLLFVL
SIO_010081: PERMA_RS01895
subclass of: SO_0000673
so part of: PERMA_RS01895
location: 344365..345129
location: region:344365-345129:1
so has part: feature:344365-345129:1:exon

WP_012676789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344365-345129:1:exon

PERMA_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01900
old locus tag: PERMA_0383
so part of: sequence
location: 345176..345265
location: region:345176-345265:1
so has part: feature:345176-345265:1:exon
subclass of: SO_0000663

position:345176:1
position: 345176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345265:1
position: 345265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345176-345265:1:exon

PERMA_RS01900
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 123214
locus tag: PERMA_RS01900
old locus tag: PERMA_0383
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:345210..345212,aa:Ser,seq:gct)
SIO_010081: PERMA_RS01900
subclass of: SO_0000673
so part of: PERMA_RS01900
location: 345176..345265
location: region:345176-345265:1
so has part: feature:345176-345265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345176-345265:1:exon

PERMA_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01905
old locus tag: PERMA_0382
so part of: sequence
location: complement(345267..345467)
location: region:345267-345467:-1
so has part: feature:345267-345467:-1:exon
subclass of: SO_0000010

position:345267:-1
position: 345267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345467:-1
position: 345467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345267-345467:-1:exon

PERMA_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01905
old locus tag: PERMA_0382
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKILTIEIYRSGGIYRATSPDEKNLQGIGKTKKEAIKNFLEIAKLYGSTEISSVKILFVKETANL
SIO_010081: PERMA_RS01905
subclass of: SO_0000673
so part of: PERMA_RS01905
location: complement(345267..345467)
location: region:345267-345467:-1
so has part: feature:345267-345467:-1:exon

WP_012675484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345267-345467:-1:exon

PERMA_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01910
old locus tag: PERMA_0384
so part of: sequence
location: complement(345522..346445)
location: region:345522-346445:-1
so has part: feature:345522-346445:-1:exon
subclass of: SO_0000010

position:345522:-1
position: 345522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346445:-1
position: 346445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345522-346445:-1:exon

PERMA_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01910
old locus tag: PERMA_0384
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458994.1
GO function: GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR01212 family radical SAM protein
translation: MGNYIRFNQYLKEKYGGRIQKISIDAGFTCPNRDGFKGHGGCTFCNNASFSPYAMSKQTVEDQIEKSIDFYKKRFKNIKGFIAYFQAFSNTYAPVSKLKEIYDRAMEYDEIIGMSIGTRPDVAPDEALDLIATYTAYKPEIWIEYGLQTANIKTLREINRGHGVSEFVDAVLRTKKRAGIKVCAHMIVGLPGDTFEDYVETAKLIAALGIEGIKIHPLHIVKHTIMEKQFYRGQIKTLTLEEYADIVAHLLDILPDDIIVHRLTGEATEEELISPDWCTSKRKMEVLNAIDEAIKRRQSNKKLSLKQ
SIO_010081: PERMA_RS01910
subclass of: SO_0000673
so part of: PERMA_RS01910
location: complement(345522..346445)
location: region:345522-346445:-1
so has part: feature:345522-346445:-1:exon

WP_015898902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345522-346445:-1:exon

PERMA_RS10440
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10440
old locus tag: PERMA_0385
so part of: sequence
location: complement(346498..348564)
location: region:346498-348564:-1
so has part: feature:346498-348564:-1:exon
subclass of: SO_0000010

position:346498:-1
position: 346498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348564:-1
position: 348564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346498-348564:-1:exon

PERMA_RS10440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10440
old locus tag: PERMA_0385
inference: COORDINATES: protein motif:HMM:NF012772.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EAL domain-containing protein
translation: MRKVYITILFAIVFSLSIVFFNNFTRRYVEKTAFTLSLIKDIESLEYQLNNEILKNSFMLYYNHDIIYELIEDIYKKIEKLKNGYLTKDQYSETYKYLLAFENAFKEKEEYIHDFETINSIIKNTQTFIPSLVLRYIEIAQHENNEYFYLISSIASSIYLAKNSLDEDFIDDLEEKIKKLESFRFKDPKLNEFNEVYLSHIRVFIENFTKYQYILDYILNKKKDIYFLSETKKTFINSSKEETKFITVFSTLLSIVFLVGLAIVAYLMISLDRKNITLLKLKKNLEKALTTDELTGLPNRLAFNIDKKISKNPAFILINIDNFKQINDFYGTDTGDFVLVKVGEIISRFIKEKNIKGTVYRIGADDFGILVEDNTDNVEHITKQLLTRIEKHRFKLADIDLFINVSAGISTERPLFEKADMALKRIKELKKKYLVYNEELDLAKDIGNNLKILSIIKDAIESERIFFVFQPIKSVKDEKIDKYEVLVRIKDREGNIIEPNVFIPIAKESGYYGYITRTVLEKTLKLIEEYPYRFSINLSIEDIMDPDTRDFIYEKIITKRELAERLTLEILESESAGNYEDSHEFVKKVKMCGVQIAIDDFGSGYSNFSHVLNLEPDYIKIDASLIKNIDKDIYSQVVVSTIITFASKLGIKTIAEFVHNDSIYEIVKDLGVDYVQGYYIGKPIDKLP
SIO_010081: PERMA_RS10440
subclass of: SO_0000673
so part of: PERMA_RS10440
location: complement(346498..348564)
location: region:346498-348564:-1
so has part: feature:346498-348564:-1:exon

WP_012676181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346498-348564:-1:exon

PERMA_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01920
old locus tag: PERMA_0386
so part of: sequence
location: complement(348561..349481)
location: region:348561-349481:-1
so has part: feature:348561-349481:-1:exon
subclass of: SO_0000010

position:348561:-1
position: 348561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349481:-1
position: 349481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348561-349481:-1:exon

PERMA_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01920
old locus tag: PERMA_0386
inference: COORDINATES: protein motif:HMM:NF015131.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c peroxidase
translation: MVLIKLSYGIEPIQPIPIRIEYNREKAELGKILFHDPILSRDRSVSCASCHDVYEKWGTDHRKASVGVGGKVGNVNAPTVFNTFFNFRQFWNGRAKNLKEQVEGPIHNPIEMGMSKREIEKRLNSIPFYRKMFKKIYNADRITYDIVIDAIVEFEKALITPNSKFDRYLRGEVKLSKEEKEGYMLFKKFGCITCHNGINVGGNSFQKIGAIKPFPWSPENPDRYQLTKREFDKNRYKVPSLRNIECTYPYFHDGSVQTLEDAIRTMAYHNLGFKLSEEEVRKIVAFLKTLTGELPEILKKDLKDRR
SIO_010081: PERMA_RS01920
subclass of: SO_0000673
so part of: PERMA_RS01920
location: complement(348561..349481)
location: region:348561-349481:-1
so has part: feature:348561-349481:-1:exon

WP_012675405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348561-349481:-1:exon

PERMA_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: leuB
locus tag: PERMA_RS01925
old locus tag: PERMA_0387
so part of: sequence
location: complement(349587..350660)
location: region:349587-350660:-1
so has part: feature:349587-350660:-1:exon
subclass of: SO_0000010

position:349587:-1
position: 349587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350660:-1
position: 350660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349587-350660:-1:exon

PERMA_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: leuB
locus tag: PERMA_RS01925
old locus tag: PERMA_0387
EC number: 1.1.1.85
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288176.1
GO function: GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydrogenase
translation: MKRTFKIAVLPGDGIGPEIMEAAIEVLNAVSKKYDLQFEYKEGLIGGAAIDATGDPLPDETLKIAKESDAVLLAAVGGEKWDNLPTDKRPEKGLLRIRKELELFANLRPGKAYTALLDSSPLKETLIKGVDLVVIRELTGGIYFGEPRGIEERKGEKVGFNTMIYYEHEVKRIAKLAFEIARGRKKKVTSVDKANVLEVSALWREIVTETHSDYQDVELEHMYVDNCAMQLVRRPKDFDVIVTGNLFGDILSDEAGALTGSLGMLPSASIGERYALYEPVHGSAPDIAGQGIANPIAMILSAAMMLDITCKVPQAARDIENAVEKVLNEGYRTGDIWSPGTKKVNTKEMTEAIIEHI
SIO_010081: PERMA_RS01925
subclass of: SO_0000673
so part of: PERMA_RS01925
location: complement(349587..350660)
location: region:349587-350660:-1
so has part: feature:349587-350660:-1:exon

WP_012675887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:349587-350660:-1:exon

PERMA_RS01930
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: nadC
locus tag: PERMA_RS01930
old locus tag: PERMA_0388
so part of: sequence
location: complement(350684..351511)
location: region:350684-351511:-1
so has part: feature:350684-351511:-1:exon
subclass of: SO_0000010

position:350684:-1
position: 350684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351511:-1
position: 351511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350684-351511:-1:exon

PERMA_RS01930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: nadC
locus tag: PERMA_RS01930
old locus tag: PERMA_0388
EC number: 2.4.2.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674693.1
GO function: GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO process: GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxylating nicotinate-nucleotide diphosphorylase
translation: MLDRLYVRKKIEQFLMEDIGYSDLTSDNLGISKDIKASVIAKEDGIIAGIDFAKEVFLILDRDIRFPFSLKDGSEVKKGDTVLSVEGSAVSVLKGERVALNILQRLSGIATTASRYAEKIKDLKTRILDTRKTTPGFRAFEKYAVKVGGGSNHRFALYDMVMIKDNHIAVCGGITKAVNRIRENVSPMVKIEVEVSDLNQLKEALSLNVDIIMLDNMSLEMLKEAVNIVNGKVLLEASGNITVENVRDVALTGVDFISSGSIIHSSRWLDLSMKI
SIO_010081: PERMA_RS01930
subclass of: SO_0000673
so part of: PERMA_RS01930
location: complement(350684..351511)
location: region:350684-351511:-1
so has part: feature:350684-351511:-1:exon

WP_012675656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350684-351511:-1:exon

PERMA_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: hemJ
locus tag: PERMA_RS01935
old locus tag: PERMA_0389
so part of: sequence
location: complement(351521..351949)
location: region:351521-351949:-1
so has part: feature:351521-351949:-1:exon
subclass of: SO_0000010

position:351521:-1
position: 351521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351949:-1
position: 351949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351521-351949:-1:exon

PERMA_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: hemJ
locus tag: PERMA_RS01935
old locus tag: PERMA_0389
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545896.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protoporphyrinogen oxidase HemJ
translation: MYLWIKALHIMSVISWFAVLFYLPRLFVYHAENRDKKEFVSVVKIMEYKLHKYIGIPAFWGTVITGSLLIVMNPDLFKSGGWLHAKLLFVSLLIGYYIYTAVLRRKLEADQCDRSGKFFRMYNEIPTILMIIIVSLAVVKPF
SIO_010081: PERMA_RS01935
subclass of: SO_0000673
so part of: PERMA_RS01935
location: complement(351521..351949)
location: region:351521-351949:-1
so has part: feature:351521-351949:-1:exon

WP_012676583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351521-351949:-1:exon

PERMA_RS10685
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10685
old locus tag: PERMA_0390
so part of: sequence
location: 352064..352210
location: region:352064-352210:1
so has part: feature:352064-352210:1:exon
subclass of: SO_0000010

position:352064:1
position: 352064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352210:1
position: 352210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352064-352210:1:exon

PERMA_RS10685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10685
old locus tag: PERMA_0390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459490.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVADIVILSLLVGGSVFYLYKKFRKDIQKGKCASCPVYGECESEKKV
SIO_010081: PERMA_RS10685
subclass of: SO_0000673
so part of: PERMA_RS10685
location: 352064..352210
location: region:352064-352210:1
so has part: feature:352064-352210:1:exon

WP_012675486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352064-352210:1:exon

PERMA_RS01940
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01940
old locus tag: PERMA_0391
so part of: sequence
location: complement(352235..352576)
location: region:352235-352576:-1
so has part: feature:352235-352576:-1:exon
subclass of: SO_0000010

position:352235:-1
position: 352235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352576:-1
position: 352576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352235-352576:-1:exon

PERMA_RS01940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01940
old locus tag: PERMA_0391
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674759.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster assembly accessory protein
translation: MQSTVNFTVTETAANEIKKIADEQGIENPILRVRVVPGGCSGFQYAMGFDEEITENDKVVELENGVKIAIDEFSAPYIGGAVLDYVQDFMGGGFTIKNPNAANSCGCGNSFSC
SIO_010081: PERMA_RS01940
subclass of: SO_0000673
so part of: PERMA_RS01940
location: complement(352235..352576)
location: region:352235-352576:-1
so has part: feature:352235-352576:-1:exon

WP_012676330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352235-352576:-1:exon

PERMA_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: sppA
locus tag: PERMA_RS01945
old locus tag: PERMA_0392
so part of: sequence
location: complement(352644..353471)
location: region:352644-353471:-1
so has part: feature:352644-353471:-1:exon
subclass of: SO_0000010

position:352644:-1
position: 352644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353471:-1
position: 353471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352644-353471:-1:exon

PERMA_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: sppA
locus tag: PERMA_RS01945
old locus tag: PERMA_0392
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546406.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptide peptidase SppA
translation: MKKKIAIGVVLFLIIIYLISFFSYRATPKIAIIEIHGVISDFYSHIQNIESAESDDSIKAVVISVDSPGGTVGAAQEIYRAIERLRTKKPVVVSMGNVAASGGYYISAPASVIYANPGTITGSIGVIIQHMDLSRVLDKLGIKVENIKSGKNKDILYPNKSLSPEQKKLIEDTIKDVYDQFLEAIVRYRPITKDQLRPYADGRIFSGRQAKKIKLVDKLGNIQDAVNEARKLAGLEDRHVVIIKLGKRKNILEKLLNSDMNSIITPSGIYYMLSF
SIO_010081: PERMA_RS01945
subclass of: SO_0000673
so part of: PERMA_RS01945
location: complement(352644..353471)
location: region:352644-353471:-1
so has part: feature:352644-353471:-1:exon

WP_012675273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352644-353471:-1:exon

PERMA_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rbfA
locus tag: PERMA_RS01950
old locus tag: PERMA_0393
so part of: sequence
location: complement(353486..353788)
location: region:353486-353788:-1
so has part: feature:353486-353788:-1:exon
subclass of: SO_0000010

position:353486:-1
position: 353486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353788:-1
position: 353788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353486-353788:-1:exon

PERMA_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rbfA
locus tag: PERMA_RS01950
old locus tag: PERMA_0393
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546740.1
GO function: GO:0019843 - rRNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosome-binding factor RbfA
translation: MKRSHRMEKVNNELKRVLSEIFLTEIPVQQDNIVTVLRVEATSDLNEAKVYVSALKNGQDVVEQLNQKSGYIRHLVGNRIKIRKVPKFKFILAEDLPILV
SIO_010081: PERMA_RS01950
subclass of: SO_0000673
so part of: PERMA_RS01950
location: complement(353486..353788)
location: region:353486-353788:-1
so has part: feature:353486-353788:-1:exon

WP_015898922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353486-353788:-1:exon

PERMA_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01955
old locus tag: PERMA_0394
so part of: sequence
location: complement(353785..354066)
location: region:353785-354066:-1
so has part: feature:353785-354066:-1:exon
subclass of: SO_0000010

position:353785:-1
position: 353785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354066:-1
position: 354066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353785-354066:-1:exon

PERMA_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01955
old locus tag: PERMA_0394
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288221.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF503 domain-containing protein
translation: MIIGSVVFEIHIPYAGSLKEKRMVVRSVKEKLKSKFNVSVSEIGDLDKWQSAQVAVVTVAPDRKQAEKVVQNVINFVENNYPDIHINVYKELI
SIO_010081: PERMA_RS01955
subclass of: SO_0000673
so part of: PERMA_RS01955
location: complement(353785..354066)
location: region:353785-354066:-1
so has part: feature:353785-354066:-1:exon

WP_012676092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353785-354066:-1:exon

PERMA_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01960
old locus tag: PERMA_0395
so part of: sequence
location: complement(354102..354890)
location: region:354102-354890:-1
so has part: feature:354102-354890:-1:exon
subclass of: SO_0000010

position:354102:-1
position: 354102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354890:-1
position: 354890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354102-354890:-1:exon

PERMA_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01960
old locus tag: PERMA_0395
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674700.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TatD family hydrolase
translation: MIDTHAHLDMLKSEEDLLESVEKLDYIITIGCDKEEIYRAIELAEKFENVYASIGFHPYDVNGIDDKDLDNLRSLAVEKRKVVAIGETGLDFYRDITPKDRQIYFFEKQIQISKELELPLVVHSRSADKETVEILEKYYPYPASGVMHCFGGSIDMMRASVDMGFYISFAGNVTYPKADSLREVLKNTPLDRLLLETDSPFLSPQKKRGKPNRPSYIYYTLDYVSSLLGISSEELEKITDRNAKRLFKIEEYENIIVDKILE
SIO_010081: PERMA_RS01960
subclass of: SO_0000673
so part of: PERMA_RS01960
location: complement(354102..354890)
location: region:354102-354890:-1
so has part: feature:354102-354890:-1:exon

WP_041530991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354102-354890:-1:exon

PERMA_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ftsH
locus tag: PERMA_RS01965
old locus tag: PERMA_0396
so part of: sequence
location: complement(354892..356775)
location: region:354892-356775:-1
so has part: feature:354892-356775:-1:exon
subclass of: SO_0000010

position:354892:-1
position: 354892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356775:-1
position: 356775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354892-356775:-1:exon

PERMA_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ftsH
locus tag: PERMA_RS01965
old locus tag: PERMA_0396
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288858.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent zinc metalloprotease FtsH
translation: MQFSKSLLIWFLIGALMIFAFNMFSAKPSFEHKVSFTEFVEMVNEGKIKEATVKGEEIVAISENGKKIETVIPEGYDKIYDILSENNVQITVVPQEKSGWLATLLISWLPILLFIGLWIFMMRQMSGGSNRAFSFAKSKAKVYLEEKPNVKLDDVAGMDEVKEEVKELIDYLKEPQRFQKLGGRAPKGILLYGDPGVGKTLLAKAIAGEANVPFISISGSDFVEMFVGVGAARVRDLFETAKKHAPCLVFIDEIDAVGRARSGVGFGGGHDEREQTLNQLLVELDGFDSSEGIIVIAATNRPDILDPALLRPGRFDRQISVPKPDVKGRYEILKVHVKKKNIPLGDDVDLMVIARGTPGFSGADLANVVNEAALLAARRRKEKVGMREFEDAMDRIMMGLERKGMAITPAEKEKIAYHEVGHAIVGMMFKESDPLHKVSIIPRGMALGVTVNLPEEDRHLYSKKDLMARLHQLFGGRAAEEVFYGKDGITTGAENDLMRATELAYRIVASWGMTDELGPIHVSTSRNNPFTPSQGPEISEETARKIDEQVSRLLRESYERAKQIIENYKDAVTAVVELLIDKETITCEEMLSILEKYGVPVVNRCRKSVVEVISDSSAPEVPAGQVD
SIO_010081: PERMA_RS01965
subclass of: SO_0000673
so part of: PERMA_RS01965
location: complement(354892..356775)
location: region:354892-356775:-1
so has part: feature:354892-356775:-1:exon

WP_012675894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354892-356775:-1:exon

PERMA_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: tilS
locus tag: PERMA_RS01970
old locus tag: PERMA_0397
so part of: sequence
location: complement(356776..358134)
location: region:356776-358134:-1
so has part: feature:356776-358134:-1:exon
subclass of: SO_0000010

position:356776:-1
position: 356776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358134:-1
position: 358134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356776-358134:-1:exon

PERMA_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: tilS
locus tag: PERMA_RS01970
old locus tag: PERMA_0397
EC number: 6.3.4.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676683.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MVEKKFLEAVKKYSLISEGDRILVAFSGGIDSTVLTYLLIKFRDHLKISDIYLAHLNHSLRKESDEDQRFCEDFAKKYGLEIFTKKVDIKSLAEKEKKSIEQKAREERYSFFRKVMEERSINRLATGHHLSDLVETMIMWFIQGNRKGIKGFRPKERDIIRPLYLINKDQIENYAREKGIEYRIDITNFETDFLRNRIRHNIIPHIKGINPSLEGSLLTLSYFLSLDDQYLEEESEKISQKFLNGKIELEELLVYDKALVYRAIQNWIYRKTGVYPSYRQIMDIMEIIEKKEGTKSIRLSPEYNLIRRYSTLYIEKVKEKTEPYQYRIKPGEKIFVKEANLYIKSYIETDYTLDKLKDERKKVCFQIESMEDAEFVVRNRRKGDRFIPFGRKKEKKLKDVMIDLKIPSDMRENIPLVVYGNKILWIAGYKRSAYFPVTEKGKKLICFELEEV
SIO_010081: PERMA_RS01970
subclass of: SO_0000673
so part of: PERMA_RS01970
location: complement(356776..358134)
location: region:356776-358134:-1
so has part: feature:356776-358134:-1:exon

WP_012676683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356776-358134:-1:exon

PERMA_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01975
old locus tag: PERMA_0398
so part of: sequence
location: complement(358173..358246)
location: region:358173-358246:-1
so has part: feature:358173-358246:-1:exon
subclass of: SO_0000663

position:358173:-1
position: 358173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358246:-1
position: 358246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358173-358246:-1:exon

PERMA_RS01975
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 123214
locus tag: PERMA_RS01975
old locus tag: PERMA_0398
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(358210..358212),aa:Met,seq:cat)
SIO_010081: PERMA_RS01975
subclass of: SO_0000673
so part of: PERMA_RS01975
location: complement(358173..358246)
location: region:358173-358246:-1
so has part: feature:358173-358246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358173-358246:-1:exon

PERMA_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpsT
locus tag: PERMA_RS01980
old locus tag: PERMA_0399
so part of: sequence
location: complement(358255..358533)
location: region:358255-358533:-1
so has part: feature:358255-358533:-1:exon
subclass of: SO_0000010

position:358255:-1
position: 358255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358533:-1
position: 358533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358255-358533:-1:exon

PERMA_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpsT
locus tag: PERMA_RS01980
old locus tag: PERMA_0399
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675604.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
translation: MAHTRSAKKRIRQAEKRRLLNRYHISRMKTAIKRITEALKNKDIETAEKLLPLAQKLAYRAAAKGAIHKNEAARRVSRIYRKVNAAKASLSQ
SIO_010081: PERMA_RS01980
subclass of: SO_0000673
so part of: PERMA_RS01980
location: complement(358255..358533)
location: region:358255-358533:-1
so has part: feature:358255-358533:-1:exon

WP_012675604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358255-358533:-1:exon

PERMA_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01985
old locus tag: PERMA_0400
so part of: sequence
location: 358697..359899
location: region:358697-359899:1
so has part: feature:358697-359899:1:exon
subclass of: SO_0000010

position:358697:1
position: 358697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359899:1
position: 359899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358697-359899:1:exon

PERMA_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01985
old locus tag: PERMA_0400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674270.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine adenosyltransferase
translation: MAKIAVGTLEFPKVSDLPVEIVERKGIGHPDTICDALAEELSIALSELYRKECGAIMHHNVDKALLIGGIADPRFGGGHMVAPIEVYLTGRAINELNGKRLPVEELAIETAHRWLKENIPNIDISNHIIIHPKLKPGSKDLVELFERFQIKGEIPLANDTSFGVGYAPFNDIETIVYELEKALNSKEFKKEHPYVGEDIKIMGVRNDDYIRITIAMAFVDRYVKDVNDYMEKKEIVTNYAYSLAKKLTDRTVDIFINTADDPDNESVYITVTGTSAEAGDDGQVGRGNRVNGLITPYRPMSLEAAAGKNPVSHIGKIYNTAAMDMAERIVSEIEEIEEAYCYLVSQIGKPITEPQVCDVKLRINKDIKGIEEEVRRIAQEEIDKLPETWNKFLKRHFRLY
SIO_010081: PERMA_RS01985
subclass of: SO_0000673
so part of: PERMA_RS01985
location: 358697..359899
location: region:358697-359899:1
so has part: feature:358697-359899:1:exon

WP_012676192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:358697-359899:1:exon

PERMA_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS01990
old locus tag: PERMA_0401
so part of: sequence
location: 360007..362001
location: region:360007-362001:1
so has part: feature:360007-362001:1:exon
subclass of: SO_0000010

position:360007:1
position: 360007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362001:1
position: 362001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360007-362001:1:exon

PERMA_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS01990
old locus tag: PERMA_0401
inference: COORDINATES: protein motif:HMM:NF019974.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methyl-accepting chemotaxis protein
translation: MYFFSNLSIKTKLLILSLVPVLVILFYSGLIFNGNYNKYRETQSLEHAVNLSVKLSAVVHEVQKERGRTAGFLGSEGKEFRSELSAQRKLTDKKVDELKSYIRKIDLSHLPEGLKMEINVILEKVDTIPQIRREVDDFSITLREAIKLYTDINTKLLHAIGSIAKYSSDAKITRELAAYVNFLLAKERMGIERAVLSAVFARDSFNEHLYQRFLSLLSEQRAFLTGFKMLATDKFLNFYKKTMVGKAIKEVERMENIALEKASVGAFGIDPSYWFDTITEKINLMKKVEDYMSDSLINDISAAKESVFRSLILETAFSAVIISAILLLGFVIQRSINRSIQVIKESVDYIAQTKDFTKKIYLDSKDEMHDIADAVNNFLEASKKAIEQAKISAEENASIASELSATAVEIGKRAEEESKIVMETTEKALGTQEPLRNLVSKLDETKEEIKKANGILNRASNQINELIVTVKRSAEEEMDIVRELETLKRSTDKTQEVLKLIEDIADQTNLLALNAAIEAARAGEVGRGFAVVADEVRSLAEKSREYVDSITETISELINEINLITEKISFNAENITRLTESSSHVERDVDEVTSVMDQTVRMAEDASVSVRSIVSEIEEIIKDIERINEISGANARSVEEIATATEHLYKLIENLNKILEEFKT
SIO_010081: PERMA_RS01990
subclass of: SO_0000673
so part of: PERMA_RS01990
location: 360007..362001
location: region:360007-362001:1
so has part: feature:360007-362001:1:exon

WP_012676939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:360007-362001:1:exon

PERMA_RS01995
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rgy
locus tag: PERMA_RS01995
old locus tag: PERMA_0402
so part of: sequence
location: complement(362002..365496)
location: region:362002-365496:-1
so has part: feature:362002-365496:-1:exon
subclass of: SO_0000010

position:362002:-1
position: 362002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365496:-1
position: 365496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362002-365496:-1:exon

PERMA_RS01995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rgy
locus tag: PERMA_RS01995
old locus tag: PERMA_0402
EC number: 3.6.4.12
EC number: 5.6.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460317.1
GO function: GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: reverse gyrase
translation: MSAIPIVYKDICPNCGGEITAERLEKGLLCESCLPEEIPREDICGILGYGRFVSICELWDKVNDFKSYFKGIINNDLWSIQETWTKRFFLNISYALLAPTGIGKTTFGLVLSKYLSEKEGKKTYLIFPTQVLVNQAYDRLVSFGMDPEKLLAYSTKFAKTKKKQEELKEKIKNNQFDILITTTMFLYKNIDIIPKGEFSLVFVDDVDSVLKSAKNIDKILMLLGFSEEDIQDTLKFITFKQKIFRQGQPEEKDLEIFNRWQEKINRISQKRKGVLIVSSATSNPRSKRVNLFRELLGFEVGRPSLTLRNIEDLYEKPDDVWETSVERIKKLGSGGLVFLSSSETRETLERYVKFLNEKGINAISYEDLMDSLEKFRSGEIPVVVGFASYRNPIARGLDLPDVIRYALFVGVPKLQFNIRFEEEFIHLYYFMLTLTPFLIKKKLIDPQEVRQLYEYINFLKVYAFIPEEKLDREKAERLREIQVYVKSIVEKPEVFDQIKDSPEITLKKTDEGFILITADVTGYIQASGRTSRLYAGGLTKGLAYLLVDDDKAFYSLQKKVRWFSEDIQFKPADQVDLEKILKEIDQDRENVRKVLSGEIIVEERQSFKTTVVIVESPNKARTIANFFGKPLRRKLKGIDAYEIAIGDKFLTIIASKGHIFDLNKEEEYFGVRKNSHFIPVFEPIDEGRKHIIEGIRELDLEVQEVFIATDPDTEGEKISYDLYLLSKPYNFNVKRAEFHEVTKKAFLEAVENYRDIDKNLVKAQLLRRISDRWIGFTISQYVQEKLHRHYLSAGRVQTPVLEWIIERTDQAKQKIAVVRVFIDNIPVEFSFEDRNRAKWFYQNIQFVIVSVKEKKEEKLFVRPFSTDTMLTASARELGFSPQETMSLAQDLFEAGLITYHRTDSIRVSDAGVFVAKEYIQENFGSEYIKIRTYSTYEGAHECIRPTRAVDADELRSMVYTMNLQGITRKHIRLYDLIFRQFIASQMREAVVEKVVYSVRAFDEEVETDLITDIIQHGYDLILPIRTDKLPEGKVDIKKKSYHLKPKVSYYTFGEIIKEMKEKGIGRPSTYAITVQKLLDRHYIIERRGYLFPTKLGRQVMELIKRREDIYRFVNESFTKELESLMDRIEQGKADYEKELEKLFKELEEKKLFFKVEIGKYSYEE
SIO_010081: PERMA_RS01995
subclass of: SO_0000673
so part of: PERMA_RS01995
location: complement(362002..365496)
location: region:362002-365496:-1
so has part: feature:362002-365496:-1:exon

WP_012676084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362002-365496:-1:exon

PERMA_RS02000
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02000
old locus tag: PERMA_0403
so part of: sequence
location: complement(365570..366574)
location: region:365570-366574:-1
so has part: feature:365570-366574:-1:exon
subclass of: SO_0000010

position:365570:-1
position: 365570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366574:-1
position: 366574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365570-366574:-1:exon

PERMA_RS02000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02000
old locus tag: PERMA_0403
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288357.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MQAKGQTVLVTGAAGFIGWKTSKLLLEGGFNVVGIDNMNSYYDVRLKEWRKKDLERYENFRFFHIDIENLGALRVLFDSFQFDAVLNLAARAGVRYSMENPHVYLQTNAQGTLNLLEMMKDHGIKKMVLASTSSLYAGQPMPFKEDLPVNTPISPYAASKKAAEVMAYTYHYLYGLDITVVRYFTVYGPAGRPDMSIFRFIKWIDEGKPIKLFGDGSQARDFTYVDDIAKGTVLAMKNLGYEIINLGGGKNPISLKSIIQKIEDLLGKKAVIEYRPFHKADMKETWADIEKAEKILGWRPEISIDEGLKRTVQWYIENREWLKDIKLEEGKQNI
SIO_010081: PERMA_RS02000
subclass of: SO_0000673
so part of: PERMA_RS02000
location: complement(365570..366574)
location: region:365570-366574:-1
so has part: feature:365570-366574:-1:exon

WP_012676728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365570-366574:-1:exon

PERMA_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02005
old locus tag: PERMA_0404
so part of: sequence
location: 366631..367740
location: region:366631-367740:1
so has part: feature:366631-367740:1:exon
subclass of: SO_0000010

position:366631:1
position: 366631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367740:1
position: 367740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366631-367740:1:exon

PERMA_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02005
old locus tag: PERMA_0404
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKKDIRILEIIDSHGWCGTKEQTYLITRELSGYFHVDLALAFDHKEMIERLDKKVPLKFYEIDNGSKRRFNIKNYRRLYRIITEGNYDVVIPNSSWSFNYLRIIYPFLKKKPKVIAMRRSGYIPSFVSKYLKYSIADRIVVVSKDVAKQLAENGFFPEKLVTIESGIDLSRFKPYDEFRDAVREELGISDREKVFINVANWQPWRKGQDILLKAFKDLNCENCRLILVGNDTDGEEAKSMIDQLGLKDKVITLGFRPDVDRLLQGADFFVLSSNSEGIAGALLQAMASGKVVLSTLAGGIAEYLKDGYNGFSVPVGDTKGLEEKMRQMLSLSDDQYRAISKNAVETAKRYSIEETTKKWVKLIEEVVNS
SIO_010081: PERMA_RS02005
subclass of: SO_0000673
so part of: PERMA_RS02005
location: 366631..367740
location: region:366631-367740:1
so has part: feature:366631-367740:1:exon

WP_012675901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366631-367740:1:exon

PERMA_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02010
old locus tag: PERMA_0405
so part of: sequence
location: 367783..368745
location: region:367783-368745:1
so has part: feature:367783-368745:1:exon
subclass of: SO_0000010

position:367783:1
position: 367783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368745:1
position: 368745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367783-368745:1:exon

PERMA_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02010
old locus tag: PERMA_0405
EC number: 1.3.1.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673766.1
GO function: GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO process: GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroorotate dehydrogenase
translation: MEGKAVPLKDPLSYELFGIKFKNPVWTASGCFSYGLEVAQNLYDISELGAVVVKGLSYRPREGNPPQRIVETPCGMLNSIGLQNPGVEYFIKNILPQLREYDTVIVANVFGEDEDEYLKVAEVLNKADGVDLLELNVSCPNVKKGGIAFGSDPETLFNLVYRLKQVMEKPLLVKLSPNITDILDTATASVEAGADGLVLINTLLGMAIDIDKEEPIIGMRTGGLSGPAILPVAVRMIYQVYEKYGSSVPIIGVGGITTAQDALQHILAGAVSVQIGTANFYDPYSPLKVIKGLKEHLDKKGYDHFLQLVGKAHKIKIKEV
SIO_010081: PERMA_RS02010
subclass of: SO_0000673
so part of: PERMA_RS02010
location: 367783..368745
location: region:367783-368745:1
so has part: feature:367783-368745:1:exon

WP_012676527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367783-368745:1:exon

PERMA_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02015
old locus tag: PERMA_0406
so part of: sequence
location: 368746..370731
location: region:368746-370731:1
so has part: feature:368746-370731:1:exon
subclass of: SO_0000010

position:368746:1
position: 368746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370731:1
position: 370731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368746-370731:1:exon

PERMA_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02015
old locus tag: PERMA_0406
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288152.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M3 family metallopeptidase
translation: MFPEFTVSDENIDQQKEAVLKQIEENKKEIEKLLEIKDKTYKNFVRPYQLLQEKLGWLFSPISHLNYVKNSEKTQEAYTSVLPALTEYHTSISQDERLYRAFKQIYENEKDTLNQEQKKVLQDLIRDFELSGVGLPEDERKKIKDINIKLSQLQNSFAQNILNATDSYEMIIEDPDDVKELPEIEKDNAKIERDGREVYRFTLHQPSYIAYMTYGSNREKREQLYRAYVTRAPENEKILEEILSLRYEKARILGFKNYAELSLATKMAKSPQQVIDFLRELARKSRPQAEREYEELNEFVKDLGLKDDVQAYDFAYYSEKLKKEKFNVDDEEYKPYFEKNSVVEGLFKFLNRFLKLDFEKVDVPVWDETVDVYHIYRKGSLIGRLYLDLEAREGKRDGAWMDEWVSHHEDEKGNIIPPVAFIVANFSPSTDKNPSLLRPYDVETLFHEMGHALHHLLSEVKEPFVSGIAGVEWDAVEFPSQFFEKFAYDREVLKLFAKHYRTGEPMPEEMMDRLKNAKNFQSALAMVRQLEFALFDMLIHLDRYTAEDVQKILDQVREEVSVIKPPSYNKFQWSFSHIFAGGYAAGYYSYKWAEVLSADAYFMFIDNGIYNDELSESFYTEILSKGGSRPADQLFRNFAGREPDIDALLRLSGIKNGQEVS
SIO_010081: PERMA_RS02015
subclass of: SO_0000673
so part of: PERMA_RS02015
location: 368746..370731
location: region:368746-370731:1
so has part: feature:368746-370731:1:exon

WP_012675653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368746-370731:1:exon

PERMA_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02020
old locus tag: PERMA_0407
so part of: sequence
location: 370732..371058
location: region:370732-371058:1
so has part: feature:370732-371058:1:exon
subclass of: SO_0000010

position:370732:1
position: 370732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371058:1
position: 371058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370732-371058:1:exon

PERMA_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02020
old locus tag: PERMA_0407
EC number: 1.14.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547665.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antibiotic biosynthesis monooxygenase
translation: MIVIMTKFFVNPKHREDFKKRAIEGFGEKGIKGQKGFIKMNVLEPKNFEGMPPNDVFIIETYWESEEDFIRFTESEAFKKAHEEPPPKEWFTTFPVVEVYEVIKEVKE
SIO_010081: PERMA_RS02020
subclass of: SO_0000673
so part of: PERMA_RS02020
location: 370732..371058
location: region:370732-371058:1
so has part: feature:370732-371058:1:exon

WP_012676473.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370732-371058:1:exon

PERMA_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02025
old locus tag: PERMA_0408
so part of: sequence
location: 371116..372288
location: region:371116-372288:1
so has part: feature:371116-372288:1:exon
subclass of: SO_0000010

position:371116:1
position: 371116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372288:1
position: 372288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371116-372288:1:exon

PERMA_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02025
old locus tag: PERMA_0408
inference: COORDINATES: protein motif:HMM:NF012246.2
GO function: GO:0000287 - magnesium ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RuBisCO large subunit C-terminal-like domain-containing protein
translation: MNFIEATYILRSKKDKGPDYINRFLESISIFNGKNLTDKKYLPQLVETDIFYDESRKIYEYIFKIGFPIVLFEHNISSIISILRKVTAHSGEDEIVIVNIDIPSCYTDHFSGPKYGTDRIKRILEIEHEPVIAGHIFPFVGVGPEVYVDLFEKLAVNGVDIVIEDTSFIDDRLIPFDKRVELCLKKAEQIEKDTGRKIIYIPVLTGSVGEVFEKARFAESIGIHGFHIDIDPYGMEFLRSLSDGTEGILAVSGSVFSNRYLEGQVFVKLLRLSGADILNIPSPFNENRYTLSRVYELIREATDRWENIKPVFPMLSGYTKPSDIPDIYREFGNQVIINIEESYYNHPEGLQAGVRAFREALDCVIKGISLDECRKKSRDLDLALSKWGSH
SIO_010081: PERMA_RS02025
subclass of: SO_0000673
so part of: PERMA_RS02025
location: 371116..372288
location: region:371116-372288:1
so has part: feature:371116-372288:1:exon

WP_012676081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:371116-372288:1:exon

PERMA_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02030
old locus tag: PERMA_0409
so part of: sequence
location: 372285..372935
location: region:372285-372935:1
so has part: feature:372285-372935:1:exon
subclass of: SO_0000010

position:372285:1
position: 372285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372935:1
position: 372935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372285-372935:1:exon

PERMA_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02030
old locus tag: PERMA_0409
EC number: 3.1.3.-
inference: COORDINATES: protein motif:HMM:TIGR01489.1
GO function: GO:0016791 - phosphatase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MtnX-like HAD-IB family phosphatase
translation: MKDPAVFSDFDGTITQRDVIISIMEQFAPEEWKKIHSDLMTGVIDVDLGIKKMFNLIPSEKKDEIVQWCKENVKLRDGFEDFLLFLKKRNIPFIILSGGVDFYIYPIMEPYMDLITKIYSNRGIFSGNYIDVDFIYKCNSLCKRHCGICKPYILKNYKDKNSLIYIGDGITDLDGALYSDIIFATGYLVDYLQKLHIKYNEYYNFYDIKIKLQRLL
SIO_010081: PERMA_RS02030
subclass of: SO_0000673
so part of: PERMA_RS02030
location: 372285..372935
location: region:372285-372935:1
so has part: feature:372285-372935:1:exon

WP_012675534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:372285-372935:1:exon

PERMA_RS02035
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02035
old locus tag: PERMA_0410
so part of: sequence
location: 373086..373847
location: region:373086-373847:1
so has part: feature:373086-373847:1:exon
subclass of: SO_0000010

position:373086:1
position: 373086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373847:1
position: 373847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373086-373847:1:exon

PERMA_RS02035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02035
old locus tag: PERMA_0410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458896.1
GO function: GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c
translation: MGENTAVKWVLFFFFPALFIYGLLHVYSSKPAQAKRTAELTAEEEAGRKVYNKFCVGCHGVNGDGNSEAAKFFKNKPPNFHTAVFRWKSTPEGTLPTDDDLMHVLNWGIPQTPMPSFKLVPEVQKRAVIAYIKTFSDRWEKEKPGKSVYGSIHRPDWFGSPESIQKGKELYATNCTSCHGEKGEGDGPLASTLPVPPTDLTYPVRAAGPKPEDTFRVLTVGLEGSPMPAFNYLSEEDRWHLVSYIAYLMNKGK
SIO_010081: PERMA_RS02035
subclass of: SO_0000673
so part of: PERMA_RS02035
location: 373086..373847
location: region:373086-373847:1
so has part: feature:373086-373847:1:exon

WP_012676023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373086-373847:1:exon

PERMA_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02040
old locus tag: PERMA_0411
so part of: sequence
location: 373863..375254
location: region:373863-375254:1
so has part: feature:373863-375254:1:exon
subclass of: SO_0000010

position:373863:1
position: 373863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375254:1
position: 375254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373863-375254:1:exon

PERMA_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02040
old locus tag: PERMA_0411
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674369.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO process: GO:0009060 - aerobic respiration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome c oxidase subunit I
translation: MAENNTQLQNLVNYGLVKAHVAMGLIFFIIVALMGFLYSLQLDGIYPFPGIEFLSPGRVRMIHTAGAAYGFLVNMFTGLLYWAVPRFTGYRVLSDALGWFMFIALQAAVLITVVAILFLGMADNVEWGETPWWLDPIIVFWLLLHLLQFGAPLFKASQRGPLYVTGWYLAAMLIWTPLVVFMGNLIPRFWAVGSGAGAVQSTFIHDLIGLYVTPVAWGLMYYFVPVIMKKPMWSHGLSLLGFWGLAFFYPMNGVHHFLWSPIPMFAQYSAVFATVAVEFAVTSVLINFMMTLRGSAEQLKYNVPLRYMYTGAIFYWITCFQCAFHVTLTFQKVIHFTDWVTGHAHLIMFGTFGLWVLGMAEYVWPRLFGKETMYSKGLSEGVYWLLMIGVFAMFVDLTASGLVVGFDWIGLNPWIDSVNFSKPFWYFRSVTGIMMLTGLFMYAVNFYKTATAKSGLTAELREA
SIO_010081: PERMA_RS02040
subclass of: SO_0000673
so part of: PERMA_RS02040
location: 373863..375254
location: region:373863-375254:1
so has part: feature:373863-375254:1:exon

WP_012676603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373863-375254:1:exon

PERMA_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02045
old locus tag: PERMA_0412
so part of: sequence
location: 375269..376000
location: region:375269-376000:1
so has part: feature:375269-376000:1:exon
subclass of: SO_0000010

position:375269:1
position: 375269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376000:1
position: 376000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375269-376000:1:exon

PERMA_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02045
old locus tag: PERMA_0412
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547669.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cbb3-type cytochrome c oxidase subunit II
translation: MGKMERFSFIALVAGIIFFLFADFISWALPMFVLKDIPKKSVQDLAAEAIAKNTSAWSDFKKIARYYPEQFKKYYGEPNEESFAKALKVGHRWYVAEGCWNCHSQMVRPVSNETLRFGIPGVSNTVSYPSEYQNELQAPVLWGTKRIGQDLIREAAVHNIDWHVAHLYDPKTTSPGTVMPGYPWFFEKDENGNIVPNERGIGILTYIMWLGSWEVKPPKDFRITGTATAKNSSGAEEFAKATE
SIO_010081: PERMA_RS02045
subclass of: SO_0000673
so part of: PERMA_RS02045
location: 375269..376000
location: region:375269-376000:1
so has part: feature:375269-376000:1:exon

WP_012675628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375269-376000:1:exon

PERMA_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02050
old locus tag: PERMA_0413
so part of: sequence
location: 376057..376353
location: region:376057-376353:1
so has part: feature:376057-376353:1:exon
subclass of: SO_0000010

position:376057:1
position: 376057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376353:1
position: 376353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376057-376353:1:exon

PERMA_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02050
old locus tag: PERMA_0413
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012458893.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVSQKTVALLILFIFLFVVGTIIATRTVAYLEAGMSGSELKGFLVEVIAYVVALTGWLFLFIYSFMKGDFKDIEGPKYEILEMEEKIIKAEKEGGRY
SIO_010081: PERMA_RS02050
subclass of: SO_0000673
so part of: PERMA_RS02050
location: 376057..376353
location: region:376057-376353:1
so has part: feature:376057-376353:1:exon

WP_012676204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376057-376353:1:exon

PERMA_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02055
old locus tag: PERMA_0414
so part of: sequence
location: 376353..376577
location: region:376353-376577:1
so has part: feature:376353-376577:1:exon
subclass of: SO_0000010

position:376577:1
position: 376577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376353-376577:1:exon

PERMA_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02055
old locus tag: PERMA_0414
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673485.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MASHLENTKAVDKITYMTDAVPTWWMLFWIGYILFMVAYIVFDWIPDFLGWMNVVGQGPTAADQYIWLRELMRN
SIO_010081: PERMA_RS02055
subclass of: SO_0000673
so part of: PERMA_RS02055
location: 376353..376577
location: region:376353-376577:1
so has part: feature:376353-376577:1:exon

WP_012675391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376353-376577:1:exon

PERMA_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02060
old locus tag: PERMA_0416
so part of: sequence
location: 376782..377456
location: region:376782-377456:1
so has part: feature:376782-377456:1:exon
subclass of: SO_0000010

position:376782:1
position: 376782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377456:1
position: 377456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376782-377456:1:exon

PERMA_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02060
old locus tag: PERMA_0416
EC number: 3.4.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673811.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhomboid family intramembrane serine protease
translation: MIPIKDNIPTNKPPVLTVSFILINVLIFFYEVSLPELELIRFIHQFGLLPVDIIYLNWEKILTSMFLHGSFAHLFGNMLFLWIFGNNVEDALGRFKFVIFYILSGVGAAVTQSFISLAFGNISTPMIGASGAISGIMAAYVKLYPEARILTIIPPFFFFGFILPAWFFVGYWFLIQVLFAVATPPTVGGVAWYAHIGGFITGWILINIMYTPKKAKIVHYSVIR
SIO_010081: PERMA_RS02060
subclass of: SO_0000673
so part of: PERMA_RS02060
location: 376782..377456
location: region:376782-377456:1
so has part: feature:376782-377456:1:exon

WP_015898868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376782-377456:1:exon

PERMA_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02065
old locus tag: PERMA_0415
so part of: sequence
location: complement(377438..378151)
location: region:377438-378151:-1
so has part: feature:377438-378151:-1:exon
subclass of: SO_0000010

position:377438:-1
position: 377438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378151:-1
position: 378151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377438-378151:-1:exon

PERMA_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02065
old locus tag: PERMA_0415
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGKFHFDVFTLDGKINRKVERYGKIYWTYYRIKSFDREYCFKIRVFNGKKYSKFSRYVCKYPEKIFPDRIYDLKIQMKEGSLTLTWFSEENRFKIYRSNSEIIPPVEYAELKNKNSFTDTKLIYGKKYCYYVTAYNGKVEGNPSETVCMLYRDIFPPDPPKNPEIIKKGEDYIIIWTESSSKDVAGYLIYKNGKPLLKTPVKTYFFIDKSFKKGDKYEIIAVDKAGNRSKPVYLITE
SIO_010081: PERMA_RS02065
subclass of: SO_0000673
so part of: PERMA_RS02065
location: complement(377438..378151)
location: region:377438-378151:-1
so has part: feature:377438-378151:-1:exon

WP_148206399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377438-378151:-1:exon

PERMA_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: kdsA
locus tag: PERMA_RS02070
old locus tag: PERMA_0417
so part of: sequence
location: complement(378324..379112)
location: region:378324-379112:-1
so has part: feature:378324-379112:-1:exon
subclass of: SO_0000010

position:378324:-1
position: 378324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379112:-1
position: 379112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378324-379112:-1:exon

PERMA_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: kdsA
locus tag: PERMA_RS02070
old locus tag: PERMA_0417
EC number: 2.5.1.55
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008286287.1
GO function: GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
GO process: GO:0009058 - biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-8-phosphooctulonate synthase
translation: MDRFTVIAGPCVIENEEVCFKVAETLSELQKRYPDIRFVFKSSFDKANRSSHESFRGRGMDYGLKVLEEVKSEFGLPVLTDIHESYQAEPVSEVVDIIQIPAFLCRQTDLLLSAAKTGREINVKKGQFLSPWDTKNIVEKLKFGGAKKFYLTERGVTFGYNNLVVDFRSLPVMRQFAPVIYDATHSVQLPGGKGKSSGGQREFIYPLAKAAVSVGVDGLFFETHPDPDKALSDGPNQIPLSEFPEVIEKLISLREFLLEKDI
SIO_010081: PERMA_RS02070
subclass of: SO_0000673
so part of: PERMA_RS02070
location: complement(378324..379112)
location: region:378324-379112:-1
so has part: feature:378324-379112:-1:exon

WP_012676505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378324-379112:-1:exon

PERMA_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02075
old locus tag: PERMA_0418
so part of: sequence
location: 379179..379658
location: region:379179-379658:1
so has part: feature:379179-379658:1:exon
subclass of: SO_0000010

position:379179:1
position: 379179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379658:1
position: 379658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379179-379658:1:exon

PERMA_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02075
old locus tag: PERMA_0418
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008285959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative metalloprotease CJM1_0395 family protein
translation: MIQSKNLSKFLLMIGFGGLDSAFKQEDLKNSIERLKKQQIINQLKITEQKVKAHETAHKVAGGDLTGPVRYKYTKGPDGKLYITGGEVPIRIKEGKTPEETIQIARKIRKAALAPSDPSAQDRAVASKASILEMKARIELSKYQDESSYKKGSYLSIFV
SIO_010081: PERMA_RS02075
subclass of: SO_0000673
so part of: PERMA_RS02075
location: 379179..379658
location: region:379179-379658:1
so has part: feature:379179-379658:1:exon

WP_238527225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379179-379658:1:exon

PERMA_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02080
old locus tag: PERMA_0419
so part of: sequence
location: 379752..380354
location: region:379752-380354:1
so has part: feature:379752-380354:1:exon
subclass of: SO_0000010

position:379752:1
position: 379752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380354:1
position: 380354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379752-380354:1:exon

PERMA_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02080
old locus tag: PERMA_0419
inference: COORDINATES: protein motif:HMM:NF014667.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SCO family protein
translation: MRKILPVFFIILMFSYASDLHGSLKGFPKKLPDLKDLISDDGNSFDFSHFKGKVLLITYGYTSCPHVCPTILSYLKEVETVLNNRGYKGMFSIIFVSVDPLEDDTERLKSYKRFSGLEDFVFVTGDRKSLERVWRSLNVYVNDKGYTEMKHGDQTVKHRMIDHTAKLTIVDKKGYIREEFLGMYIPVEKVVEDVITLIEE
SIO_010081: PERMA_RS02080
subclass of: SO_0000673
so part of: PERMA_RS02080
location: 379752..380354
location: region:379752-380354:1
so has part: feature:379752-380354:1:exon

WP_012676363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379752-380354:1:exon

PERMA_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02085
old locus tag: PERMA_0420
so part of: sequence
location: 380380..380844
location: region:380380-380844:1
so has part: feature:380380-380844:1:exon
subclass of: SO_0000010

position:380380:1
position: 380380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380844:1
position: 380844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380380-380844:1:exon

PERMA_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02085
old locus tag: PERMA_0420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674093.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MotA/TolQ/ExbB proton channel family protein
translation: MNITETILKIALIGGDPVLYILILMSVITIAVVIERYLSIKKIQENMLDYEPLELKLALEKRLGILATFGNNAPFIGLFGTVLGIIKAFHDLGTSTEFGVRVVMQGISEALVATAMGLFVAIPAVIAYNYFVRKVKTILLTYEQKKNLPLELEE
SIO_010081: PERMA_RS02085
subclass of: SO_0000673
so part of: PERMA_RS02085
location: 380380..380844
location: region:380380-380844:1
so has part: feature:380380-380844:1:exon

WP_012675203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380380-380844:1:exon

PERMA_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02090
old locus tag: PERMA_0421
so part of: sequence
location: 380844..381248
location: region:380844-381248:1
so has part: feature:380844-381248:1:exon
subclass of: SO_0000010

position:381248:1
position: 381248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380844-381248:1:exon

PERMA_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02090
old locus tag: PERMA_0421
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673759.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biopolymer transporter ExbD
translation: MRLIDEDDKEISEINMTPFVDIILVVLIIFMATATFIVEGKIPLNLPKAETGEPKEIKVKRIEITILKTGELFINDKKINPDLLEEKLKQLKGKDTVVVLRADQSIEFQKVVSIIDTCRKVGLEKYMIETKRMD
SIO_010081: PERMA_RS02090
subclass of: SO_0000673
so part of: PERMA_RS02090
location: 380844..381248
location: region:380844-381248:1
so has part: feature:380844-381248:1:exon

WP_012676666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380844-381248:1:exon

PERMA_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02095
old locus tag: PERMA_0422
so part of: sequence
location: 381226..382128
location: region:381226-382128:1
so has part: feature:381226-382128:1:exon
subclass of: SO_0000010

position:381226:1
position: 381226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382128:1
position: 382128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381226-382128:1:exon

PERMA_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02095
old locus tag: PERMA_0422
inference: COORDINATES: protein motif:HMM:NF015506.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: energy transducer TonB
translation: MKQKEWIKVIKTEKINKYFLIGLVVSVLLHMSVFAVLISIERKKEKEEEKPIYVYLSEFKEEKKKAPQSEKKIPKKSEKPKPKPKVKKKVVKKPVKKPEKKVVKKKIRKEVIKPVKKPEKIVEKEPEKIEKKALPDIVYQEDELLEEIDQIVFEEDIPEFSPKEEEVLDLSKLEGKEEIFQPGKEEKVEEEVSDEDILAYIKELEMYLNNLARKRDLYPPLAKRLRIEGSLIIRFTILSDGSVDNDSIKIISSSGYNVLDKGARKLIEKYVPEFARKYGKKPPKGDLTIELPVTFEIIGW
SIO_010081: PERMA_RS02095
subclass of: SO_0000673
so part of: PERMA_RS02095
location: 381226..382128
location: region:381226-382128:1
so has part: feature:381226-382128:1:exon

WP_049756060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381226-382128:1:exon

PERMA_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rnhA
locus tag: PERMA_RS02100
old locus tag: PERMA_0423
so part of: sequence
location: 382130..382567
location: region:382130-382567:1
so has part: feature:382130-382567:1:exon
subclass of: SO_0000010

position:382130:1
position: 382130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382567:1
position: 382567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382130-382567:1:exon

PERMA_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rnhA
locus tag: PERMA_RS02100
old locus tag: PERMA_0423
EC number: 3.1.26.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012513703.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease HI
translation: MKKVEIFTDGSSLGNPGAGGWCAILRYNKHEKMIKGGKENTTNNEMEIKAVLEALKILKEPCEIDLYSDSEYVVKAMKEWIHNWAKNNWKTSKKKDVAHKDMWQEIYRLMQIHRINPIWVKAHAGHRENEICDRIAKKEAEKFRR
SIO_010081: PERMA_RS02100
subclass of: SO_0000673
so part of: PERMA_RS02100
location: 382130..382567
location: region:382130-382567:1
so has part: feature:382130-382567:1:exon

WP_012675910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382130-382567:1:exon

PERMA_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: radA
locus tag: PERMA_RS02105
old locus tag: PERMA_0424
so part of: sequence
location: 382573..383916
location: region:382573-383916:1
so has part: feature:382573-383916:1:exon
subclass of: SO_0000010

position:382573:1
position: 382573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383916:1
position: 383916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382573-383916:1:exon

PERMA_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: radA
locus tag: PERMA_RS02105
old locus tag: PERMA_0424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880325.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RadA
translation: MGRNKTVYVCSECGASFPTWSGRCSSCGSWNTLIEESVSRKKIQKSDRKALTHRPKPIKQAREEVHYRRISTGIKTLDEALGGGIVTGQVILVSGEPGIGKSTLLLQISSNISKERKVLYITGEESAHQVYLRAERIGALSDNLLVLAETDLELIIDAINQEKPDFIVLDSVQTVYSSQLESAAGSVSQVREVSGRITEIAKSFNISTIIVGQVTKEGSIAGPKVLEHIVDTVAQFEGERGHAYRVLKIIKNRFGAAGEMAVFSMGDRGLQEVMNPSSLFLSERPVGESGSVIFPYTEGSKPVLIEIQALVSKTVYAVPQRKAQGIDINRLSIITAILEKEANIFLKDRDIFVNVVGGMYIKEPALDLPLALAVVSSYRDIPVFEKLAAFGEVGLTGEIRSVHYTEHRIKEAKRFGFERILVPASSDIDEEGVIKVRNIKEAIKMIE
SIO_010081: PERMA_RS02105
subclass of: SO_0000673
so part of: PERMA_RS02105
location: 382573..383916
location: region:382573-383916:1
so has part: feature:382573-383916:1:exon

WP_012675556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382573-383916:1:exon

PERMA_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02110
old locus tag: PERMA_0425
so part of: sequence
location: 383921..384571
location: region:383921-384571:1
so has part: feature:383921-384571:1:exon
subclass of: SO_0000010

position:383921:1
position: 383921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384571:1
position: 384571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383921-384571:1:exon

PERMA_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02110
old locus tag: PERMA_0425
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459769.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MDQLKKHIKILMELGFENIFTEEGSAGMDIKEKEKLMSQINEQIQNCTNCDLYKSRTQAVLGEGNLNAKLMFIGEAPGGEEDKQGRPFVGRAGKLLTKLIEAAGYRREDFYIANICKCRPPGNRTPTPWEMERCFPYLKKQIEIIDPKVLCLLGATAGRAFLNRNVAITKERGSIINWEGRILYLTFHPAYVLRNPDAEITLFEDIKKAIQIAYQE
SIO_010081: PERMA_RS02110
subclass of: SO_0000673
so part of: PERMA_RS02110
location: 383921..384571
location: region:383921-384571:1
so has part: feature:383921-384571:1:exon

WP_012676004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383921-384571:1:exon

PERMA_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: pyrF
locus tag: PERMA_RS02115
old locus tag: PERMA_0426
so part of: sequence
location: 384653..385345
location: region:384653-385345:1
so has part: feature:384653-385345:1:exon
subclass of: SO_0000010

position:384653:1
position: 384653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385345:1
position: 385345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384653-385345:1:exon

PERMA_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: pyrF
locus tag: PERMA_RS02115
old locus tag: PERMA_0426
EC number: 4.1.1.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673508.1
GO function: GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO process: GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: orotidine-5'-phosphate decarboxylase
translation: MTEKRIAVALDVRDIKEAERILEDISGYDLIVKIGYALFIKYGREITDLVKSMGFDIFLDLKLHDIPNTVYNGVSSAVDLGVNYLTVHTLGGRQMLQKAVEAREGSDLKILGVTVLTSHSEDYMDYIGSHYTIDQLALKLAKEAVDTGVDGIVSSAHEVERLKKEIKKDFISVVPGIRFSEDSTDDQKRSATPETALRSGADILVIGRPIIKAQNRKEALNKFYEVLNRC
SIO_010081: PERMA_RS02115
subclass of: SO_0000673
so part of: PERMA_RS02115
location: 384653..385345
location: region:384653-385345:1
so has part: feature:384653-385345:1:exon

WP_015898980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384653-385345:1:exon

PERMA_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpoN
locus tag: PERMA_RS02120
old locus tag: PERMA_0427
so part of: sequence
location: 385339..386643
location: region:385339-386643:1
so has part: feature:385339-386643:1:exon
subclass of: SO_0000010

position:385339:1
position: 385339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386643:1
position: 386643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385339-386643:1:exon

PERMA_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpoN
locus tag: PERMA_RS02120
old locus tag: PERMA_0427
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460379.1
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase factor sigma-54
translation: MLKQTLNLKLQNKLVLTLSLKQQLSLLLLPTVELKETIKQELEENPFLEEIINLEPDYEPIKDLSKYYDEEETPLLSRIAYRPTLYDTLDFQIDLEFEGIEKDIAHEIAGNLDEKGLLAVSIDEIASKLNVKQEIVEEVRKRFIRLEPTGIGALTLEEALIIQYEERFGKDPLVERILREDVWNLNDMDYLSEKYGVDRKEIEEKVFYIKMLRPYPTFNYDLETTEYVEPDVYVYDRGDSFEIKVNESGIPKLKLTSQYRRLISDKSLSPEVRKFLEDKLQKAMGIMKGIELRRENLYRITELLVNYQADFLRKGKEYLKPLTLKDIASKLDLHESTVSRIVSSKYMQTDKGLIPLKAFFASKLQTSGGDISTEKVKYMICELIENEDKKKPLSDQAIANILKDRYGIKIARRTVTKYREELNIPDSRTRRTKP
SIO_010081: PERMA_RS02120
subclass of: SO_0000673
so part of: PERMA_RS02120
location: 385339..386643
location: region:385339-386643:1
so has part: feature:385339-386643:1:exon

WP_012675301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385339-386643:1:exon

PERMA_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: raiA
locus tag: PERMA_RS02125
old locus tag: PERMA_0428
so part of: sequence
location: 386640..387206
location: region:386640-387206:1
so has part: feature:386640-387206:1:exon
subclass of: SO_0000010

position:386640:1
position: 386640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387206:1
position: 387206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386640-387206:1:exon

PERMA_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: raiA
locus tag: PERMA_RS02125
old locus tag: PERMA_0428
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460380.1
GO component: GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0045182 - translation regulator activity [Evidence IEA]
GO process: GO:0009386 - translational attenuation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-associated translation inhibitor RaiA
translation: MKVEHVGKNIDVTEFIKSYTEHKLERLKPYIKDIDVADDSVEVRVTYAFEKHRHRNRVDIDIYFKTPGGGVIHAWEESNDLYSAIDFVIDEVERQLVRLKARRKEERRRLAKLKEMEKRTVTVEESIERPLIVQEPMPLEKPLTVEDARMLLEEMGAFFLPFRNAETGEVNVIYRKKAGNYGLIIPGT
SIO_010081: PERMA_RS02125
subclass of: SO_0000673
so part of: PERMA_RS02125
location: 386640..387206
location: region:386640-387206:1
so has part: feature:386640-387206:1:exon

WP_012676101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386640-387206:1:exon

PERMA_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rplM
locus tag: PERMA_RS02130
old locus tag: PERMA_0429
so part of: sequence
location: 387281..387733
location: region:387281-387733:1
so has part: feature:387281-387733:1:exon
subclass of: SO_0000010

position:387281:1
position: 387281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387733:1
position: 387733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387281-387733:1:exon

PERMA_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rplM
locus tag: PERMA_RS02130
old locus tag: PERMA_0429
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676821.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L13
translation: MKTIDARKLDIKREWYVIDATGKNLGRLATLIANILRGKHKPYFQPDVDVGDFVIVLNADKITVTGKKLTDKEYKWHTNRPGGLNVRTLQWMLEHKPEEVIRLAVERMLPKNKLQKRFMKRLKVYTGSEHKHQAQNPKNLEELKALWKNF
SIO_010081: PERMA_RS02130
subclass of: SO_0000673
so part of: PERMA_RS02130
location: 387281..387733
location: region:387281-387733:1
so has part: feature:387281-387733:1:exon

WP_012676821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387281-387733:1:exon

PERMA_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpsI
locus tag: PERMA_RS02135
old locus tag: PERMA_0430
so part of: sequence
location: 387769..388179
location: region:387769-388179:1
so has part: feature:387769-388179:1:exon
subclass of: SO_0000010

position:387769:1
position: 387769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388179:1
position: 388179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387769-388179:1:exon

PERMA_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpsI
locus tag: PERMA_RS02135
old locus tag: PERMA_0430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673907.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S9
translation: MDPKVAKYGTGRRKEAVARVWIFPGEGKIYVRSSSGKEWEAPVYFEREILMERINRPFAVTETLGKFDVYATVKGSGKPAQAEAVMYGIAKALLQYNPDFRPVLKSAGLLTRDARVKERKKYAQMGARAKYRWSKR
SIO_010081: PERMA_RS02135
subclass of: SO_0000673
so part of: PERMA_RS02135
location: 387769..388179
location: region:387769-388179:1
so has part: feature:387769-388179:1:exon

WP_202944145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:387769-388179:1:exon

PERMA_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: argC
locus tag: PERMA_RS02140
old locus tag: PERMA_0431
so part of: sequence
location: 388276..389292
location: region:388276-389292:1
so has part: feature:388276-389292:1:exon
subclass of: SO_0000010

position:388276:1
position: 388276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389292:1
position: 389292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388276-389292:1:exon

PERMA_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: argC
locus tag: PERMA_RS02140
old locus tag: PERMA_0431
EC number: 1.2.1.38
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547389.1
GO function: GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO process: GO:0006592 - ornithine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetyl-gamma-glutamyl-phosphate reductase
translation: MKIAIAGASGYTGIELLRILSSYEDIEINQISSRRYSGKRLKDVFPFFSGRFSDLVFQEDIDIQSSDFFFLCLPHEPSVELVKRVYESGKKVVDLSAAYRIKDTKAYTEFYGFEHKYPELLFKAVYGLPELFRDDIKNASVVANPGCYPTASILGLYPAVKEGVIKGEIVINALSGISGAGREPKQQFHYPEAFGDSYPYKPLMHRHIPEMENVLKNVSGSDIKVRFTPHIIPVSRGMIATITFRTDLSKDQIVELYRLEYRYEPFIRFLTEPPHTKYVSGSNFCDIFVDKDERTGLAVVITAIDNLGKGASSQAIQNFNIMTGREETYNLLTGIVYP
SIO_010081: PERMA_RS02140
subclass of: SO_0000673
so part of: PERMA_RS02140
location: 388276..389292
location: region:388276-389292:1
so has part: feature:388276-389292:1:exon

WP_012676643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388276-389292:1:exon

PERMA_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rfaE1
locus tag: PERMA_RS02145
old locus tag: PERMA_0432
so part of: sequence
location: 389289..390242
location: region:389289-390242:1
so has part: feature:389289-390242:1:exon
subclass of: SO_0000010

position:389289:1
position: 389289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390242:1
position: 390242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389289-390242:1:exon

PERMA_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rfaE1
locus tag: PERMA_RS02145
old locus tag: PERMA_0432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460384.1
GO function: GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO process: GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: D-glycero-beta-D-manno-heptose-7-phosphate kinase
translation: MIDRDRASEIVKRFPEKKILVVGDLILDRYLWGEVERISPEAPVPVVDVKRESLNLGGACNVAWNISELEGEVYIAGVVGDDINGEILVNMLSESGINPVVIRDRNRPTTEKTRIIAVSQQLMRIDREKKDRLSQTVQKRLISAIQDIIERIDAVIVSDYGKGVITRRLMDFLRKTGKPIFVDPKPSNFSLYRNITIMTPNRKEAYECVKKDRSLPIERIGSEIKRKLGIDQLLITLGSEGMALFEGESITKIPAKAKKVFDVTGAGDTVISVLTLSKVSGASWLEASSLANYAAGYVVGEIGTAAIDRDTLLSILP
SIO_010081: PERMA_RS02145
subclass of: SO_0000673
so part of: PERMA_RS02145
location: 389289..390242
location: region:389289-390242:1
so has part: feature:389289-390242:1:exon

WP_012675540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389289-390242:1:exon

PERMA_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: purS
locus tag: PERMA_RS02150
old locus tag: PERMA_0433
so part of: sequence
location: 390279..390521
location: region:390279-390521:1
so has part: feature:390279-390521:1:exon
subclass of: SO_0000010

position:390279:1
position: 390279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390521:1
position: 390521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390279-390521:1:exon

PERMA_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: purS
locus tag: PERMA_RS02150
old locus tag: PERMA_0433
EC number: 6.3.5.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547392.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylformylglycinamidine synthase subunit PurS
translation: MLVKFYIKPRKGVLDPQGRAVAENLRSLGFSDVKDVKVGKYIEVYIEENDREKAIEKAKEMARKALVNEIIEDYEFEVVE
SIO_010081: PERMA_RS02150
subclass of: SO_0000673
so part of: PERMA_RS02150
location: 390279..390521
location: region:390279-390521:1
so has part: feature:390279-390521:1:exon

WP_012676384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390279-390521:1:exon

PERMA_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: purQ
locus tag: PERMA_RS02155
old locus tag: PERMA_0435
so part of: sequence
location: 390532..391218
location: region:390532-391218:1
so has part: feature:390532-391218:1:exon
subclass of: SO_0000010

position:390532:1
position: 390532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391218:1
position: 391218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390532-391218:1:exon

PERMA_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: purQ
locus tag: PERMA_RS02155
old locus tag: PERMA_0435
EC number: 6.3.5.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547394.1
GO function: GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylformylglycinamidine synthase I
translation: MRFGVAVYPGSNCDYDTYTVIRDILKKDVEFIDYRRTDIDGFDCIVLPGGFSFGDYLRPGTLASHTPLTYALKEFADRGRYVIGICNGFQILTESHLLPGALMPNAHGKFVCKPQYLRVENSNTPFTNQCEEGQILKIPIAHHDGNYFVDQDTLKEMEDNDQIILRYCDEFGNITDEANPNGSLKNIAGICNKNKNVFGLMPHPERASESILGSEDGLYILKSIINSL
SIO_010081: PERMA_RS02155
subclass of: SO_0000673
so part of: PERMA_RS02155
location: 390532..391218
location: region:390532-391218:1
so has part: feature:390532-391218:1:exon

WP_012676018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390532-391218:1:exon

PERMA_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02160
old locus tag: PERMA_0434
so part of: sequence
location: complement(391199..391663)
location: region:391199-391663:-1
so has part: feature:391199-391663:-1:exon
subclass of: SO_0000010

position:391199:-1
position: 391199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391663:-1
position: 391663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391199-391663:-1:exon

PERMA_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02160
old locus tag: PERMA_0434
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673559.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlpA disulfide reductase family protein
translation: MKGKAVSILIIFSVVLTLSFGKTAPDFSVKDENGKIVNRDDLKGKPTLLIFWGVLCHSCREEMPVLDRLYKKYGRDINFYAVVLGTKDLQKIKKVKKEWNFEIPVLIGNGDMMYKYKIIGTPMIIVLDRNTEIFRRLIGPQSEEKIEGIIKSLL
SIO_010081: PERMA_RS02160
subclass of: SO_0000673
so part of: PERMA_RS02160
location: complement(391199..391663)
location: region:391199-391663:-1
so has part: feature:391199-391663:-1:exon

WP_012675325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391199-391663:-1:exon

PERMA_RS02165
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02165
old locus tag: PERMA_0437
so part of: sequence
location: 391720..392751
location: region:391720-392751:1
so has part: feature:391720-392751:1:exon
subclass of: SO_0000010

position:391720:1
position: 391720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392751:1
position: 392751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391720-392751:1:exon

PERMA_RS02165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02165
old locus tag: PERMA_0437
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673514.1
GO function: GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: deoxyguanosinetriphosphate triphosphohydrolase
translation: MNVREQLESFEYKFLHERASKSRDAKRKREERECDLRTKFQRDRDRILHSKAFRRLKHKTQVFLSPEGDHYRTRMTHTLEVAQIGRTIAKALRLNEDLVEAVSLGHDLGHTPFGHAGEFILKEGASYHHARQSLRVVDLLENEGMGLNLTDQVRDGILKHSKGKSPLISEGNMPSTLEGEIVRIADKIAYINHDIEDAIRAGLIQERDIPSEIRSVLGETKSERITTIIKSIINSTIDNDYRHIVMEDKVYKAMYTLREWLFENVYHAKPVVEELEKGKGIVKALYEYYLEHYYEIPYYEKYLQLWGEYDPKQASVDYVAGMTDRFALKTYEKIFIPKGWHIL
SIO_010081: PERMA_RS02165
subclass of: SO_0000673
so part of: PERMA_RS02165
location: 391720..392751
location: region:391720-392751:1
so has part: feature:391720-392751:1:exon

WP_012675871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391720-392751:1:exon

PERMA_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02170
old locus tag: PERMA_0436
so part of: sequence
location: complement(392748..393227)
location: region:392748-393227:-1
so has part: feature:392748-393227:-1:exon
subclass of: SO_0000010

position:392748:-1
position: 392748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393227:-1
position: 393227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392748-393227:-1:exon

PERMA_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02170
old locus tag: PERMA_0436
inference: COORDINATES: protein motif:HMM:NF017079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat protein U domain-containing protein
translation: MRYVITVLFIIFSFNISFAVVKGGHSTCTADIEDLPFGNYDPFEVSVKRVPALLTVRCSGHRPVTYTVKLLGGNSPDPTKRYLYSPSTDEKLYYNIFINGGCVFGDGTGGTCVISGTVQPKHHGGVQEVKHTVIGVIPPMQNVKAANDYRDALIIQIEY
SIO_010081: PERMA_RS02170
subclass of: SO_0000673
so part of: PERMA_RS02170
location: complement(392748..393227)
location: region:392748-393227:-1
so has part: feature:392748-393227:-1:exon

WP_041530859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392748-393227:-1:exon

PERMA_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02175
old locus tag: PERMA_0438
so part of: sequence
location: complement(393227..395710)
location: region:393227-395710:-1
so has part: feature:393227-395710:-1:exon
subclass of: SO_0000010

position:395710:-1
position: 395710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393227-395710:-1:exon

PERMA_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02175
old locus tag: PERMA_0438
inference: COORDINATES: protein motif:HMM:NF012786.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015473 - fimbrial usher porin activity [Evidence IEA]
GO process: GO:0009297 - pilus assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fimbria/pilus outer membrane usher protein
translation: MQTIKHQEYVCVSCLEGVDYNLNYSLLTADINFPPEFFRKEEIVIKRQQEVPAESLGLYIDYDFMYSDSSNFNYFRGATDFNLFFGKNVFTSSFLMNYSDLSSKIVRLESYLLIQDIDNIRKIKIGDIFTQSNQWNSAVRIGGISIATDFSLRPDIITYPLPEFSGETVLPSSIDIFSENAKVFSKDIKPGEFEIRDIPVISPEGNLRVIVKDILGRTRIIEIPYYTHKNLLKPGLSEFSFSTGFVRKNYINESFKYHNLITMGIYRYGFTNRLTLEFEGFLNGYKEGNVGLAPLILIPKFGTVTPLFAASYSEGKSAFLYGINYDKTFKYLTFSFRYKKNSKDFVQPGTVLGLPKEELSAFTTFRFPYIGSLSLTYMDRKFIDRDNMTNINISYSKIIFNRLSLSAAYNKNISGNNDNEVYRVSLNMPLGSNYSTSLSMQDNKKDQSYTLYLAKNMTSSTGVTYSVRGTKANGDTNFLGNLYFKSPYTILFSELSYINSEGSDSLGYRLGLKGSVIYMDGNVFFKQYANNGFALVKIEPPVEGAKVLANNRNVGTTDKNGIVFIDNIAPYYRNEIRIDPSSLDMKTHIDKTVYTFVPLRKHGYLLRFRSKKVNSVRLKIQFPDGSFPEAGLRFDIDDRTNAGIIGYNGKAFIENITAGKHIVTVDYGYGICSFELNIKEKWLEKVVPYIGEYTCVPQTGTIIVKEKKKIKVKPAKLKKDIKEKEKLKKFRKVSFKKSPENKINKPDKKSEKAENKNNKNRTYTIEVGKFSEKEIKKAVEEYEEFQTEIVKDGEIYRVYIGKFKTREDAEKFKNIFKLNGKIRVVRE
SIO_010081: PERMA_RS02175
subclass of: SO_0000673
so part of: PERMA_RS02175
location: complement(393227..395710)
location: region:393227-395710:-1
so has part: feature:393227-395710:-1:exon

WP_015899008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393227-395710:-1:exon

PERMA_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02180
old locus tag: PERMA_0440
so part of: sequence
location: complement(395894..396649)
location: region:395894-396649:-1
so has part: feature:395894-396649:-1:exon
subclass of: SO_0000010

position:395894:-1
position: 395894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396649:-1
position: 396649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395894-396649:-1:exon

PERMA_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02180
old locus tag: PERMA_0440
inference: COORDINATES: protein motif:HMM:NF012565.2
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO process: GO:0071555 - cell wall organization [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fimbria/pilus periplasmic chaperone
translation: MIFRATVFVILSVILLTYSITYALDFVVKPIRIYVFPQKTTAVFEIQSLTDKKIAVEAEVRKWDQDPEGNDILVPTEDVVVVPPYIELEGRQKQLVRLAYLGNFSRPQEFYRLLLRQVPRKIKPEKNPKKVKPYIQILLNLSIPVFVNSKSDINYSLNFEPKEKSKEKVSLTIKNDGNAFAKIVHVSLFKGEKEIFSKNMVKYVLPKKEILFELKKTKVGVNGKITTEPFEDIPDKMVIVLEDDKEITIEL
SIO_010081: PERMA_RS02180
subclass of: SO_0000673
so part of: PERMA_RS02180
location: complement(395894..396649)
location: region:395894-396649:-1
so has part: feature:395894-396649:-1:exon

WP_187146669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395894-396649:-1:exon

PERMA_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02185
old locus tag: PERMA_0441
so part of: sequence
location: complement(396703..397167)
location: region:396703-397167:-1
so has part: feature:396703-397167:-1:exon
subclass of: SO_0000010

position:396703:-1
position: 396703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397167:-1
position: 397167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396703-397167:-1:exon

PERMA_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02185
old locus tag: PERMA_0441
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKKKIITGFTILGISGIVFADSVPLPISNDDFKIQANVIKVCNIVTGAHDVTLNYDPFETGYVDGITKAKTEIEFNCSKGTEYTWTVSFDGKLEKVGDPTEYLNAQVIPQISNGTDVDGSDFVEILTLTVRIGTGQNVSVGTYEDTVNLTLTW
SIO_010081: PERMA_RS02185
subclass of: SO_0000673
so part of: PERMA_RS02185
location: complement(396703..397167)
location: region:396703-397167:-1
so has part: feature:396703-397167:-1:exon

WP_012675867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396703-397167:-1:exon

PERMA_RS10445
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10445
old locus tag: PERMA_0442
so part of: sequence
location: complement(397227..397688)
location: region:397227-397688:-1
so has part: feature:397227-397688:-1:exon
subclass of: SO_0000010

position:397227:-1
position: 397227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397688:-1
position: 397688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397227-397688:-1:exon

PERMA_RS10445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10445
old locus tag: PERMA_0442
inference: COORDINATES: protein motif:HMM:NF017079.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: spore coat protein U domain-containing protein
translation: MKKLVALALAGAVTSTAAFALSDDFKITATVAEKCVINTNAADISVNYDPFITSDYTDSTNIVFNCVKGTSGTISWTASGVLSSTDPAISDTLSYSLSATLNGSSINSGDAFTDSNGIGSGNEEILSFDITIPAQQNVNVGTYEDTVTVNIVY
SIO_010081: PERMA_RS10445
subclass of: SO_0000673
so part of: PERMA_RS10445
location: complement(397227..397688)
location: region:397227-397688:-1
so has part: feature:397227-397688:-1:exon

WP_012676699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397227-397688:-1:exon

PERMA_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02195
old locus tag: PERMA_0443
so part of: sequence
location: complement(397816..398100)
location: region:397816-398100:-1
so has part: feature:397816-398100:-1:exon
subclass of: SO_0000010

position:397816:-1
position: 397816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398100:-1
position: 398100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397816-398100:-1:exon

PERMA_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02195
old locus tag: PERMA_0443
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MGGKKISCPHCESERCVKNGKANGKQTYLCKECYYRFTINASKRKYPFKIRREAVNLYKEGYTLTEISKKLNIKVQTIHHWVKKYKDLKGIKKI
SIO_010081: PERMA_RS02195
subclass of: SO_0000673
so part of: PERMA_RS02195
location: complement(397816..398100)
location: region:397816-398100:-1
so has part: feature:397816-398100:-1:exon

WP_012676600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:397816-398100:-1:exon

PERMA_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: hemC
locus tag: PERMA_RS02200
old locus tag: PERMA_0444
so part of: sequence
location: 398301..399227
location: region:398301-399227:1
so has part: feature:398301-399227:1:exon
subclass of: SO_0000010

position:398301:1
position: 398301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399227:1
position: 399227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398301-399227:1:exon

PERMA_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: hemC
locus tag: PERMA_RS02200
old locus tag: PERMA_0444
EC number: 2.5.1.61
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008286858.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxymethylbilane synthase
translation: MRIRIGTRKSKLALWQANYIADQLKKHFPDLEVELVKIVTKGDKILDVPLAKVGGKGLFVKEIEEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITEREDPRDAFLSVKYNSIEDMPEGAVLGTSSLRRKAQIMMKRKDIRIEDLRGNVDTRIRKLEEGQYDGIILAYAGLKRLGLEGKVRQILQPDYMIPAVAQGFLGIEARLDDEKTREIVSVLNHRESEIRAKAERAFLKTLEGGCQVPLAGYSEIVNGKLKITGFVSDLTGDRVFRDSMEGSLEDAESLGVKLAEKLLSDGAKEVLEEIYSGSE
SIO_010081: PERMA_RS02200
subclass of: SO_0000673
so part of: PERMA_RS02200
location: 398301..399227
location: region:398301-399227:1
so has part: feature:398301-399227:1:exon

WP_012675459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398301-399227:1:exon

PERMA_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02205
old locus tag: PERMA_0445
so part of: sequence
location: 399234..400607
location: region:399234-400607:1
so has part: feature:399234-400607:1:exon
subclass of: SO_0000010

position:399234:1
position: 399234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400607:1
position: 400607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399234-400607:1:exon

PERMA_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02205
old locus tag: PERMA_0445
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF024629.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 39 protein
translation: MFKINLLSDKYILSLIILGVLSLFPNINVYEFRGEESLRVIVSYEMVKSGNFLQPTFLGDLYFNKPPLFNWFIAISSFLIPWSELTARIVTIIFLSLTLLLIYRFSYKIFSDKITALFSSLIYLTFTDILFWYGYLAEIDVTLAFFIFLMIYFQYFGFIENRKDYILLSGVVAGLSFLLKGFPALVFFGITYFALIIFTRRFKEFLNPFLYISAGISILIPALWILNTADPERYIQKLFLESIVRTRGGSDILKFLTHLVEYPLLNIKQLIPGVIFAFIVIFLHFRKKLSIVLPENIKLLLFIVALNYIPYILAVESRGRYVIPLFPVLAVVFGYILVKAQKEKLLRAFVYTALFFITVRFLLGFIGFPILMEKKASRKKVAYDIIQEVDISKNIACDCSPEKSVCLYIDFEKGEPLKKSKYMKNWDYLIDCSGNKKGNLLKVYDLKGKKIYLYEKR
SIO_010081: PERMA_RS02205
subclass of: SO_0000673
so part of: PERMA_RS02205
location: 399234..400607
location: region:399234-400607:1
so has part: feature:399234-400607:1:exon

WP_012675456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399234-400607:1:exon

PERMA_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02210
old locus tag: PERMA_0446
so part of: sequence
location: 400604..402319
location: region:400604-402319:1
so has part: feature:400604-402319:1:exon
subclass of: SO_0000010

position:400604:1
position: 400604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402319:1
position: 402319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400604-402319:1:exon

PERMA_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02210
old locus tag: PERMA_0446
inference: COORDINATES: protein motif:HMM:NF012869.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKKDISFLLSLFKKYWVLLFLAIAGSLLESGALAGLAYIVKNIVDDVFVSKSYESLVFVTAVLIILASAKQIGFFLKNYVYPLIVYKGIKNIRENIYGKLLNTQPSFLFKHSYGDILSRLTNDLERFSQIVTSFGTNVITETFTVMAIIVLLIYRDWKMFLIFLVAVPFLTVALGFFGEKRKKYSKKLQESYGDYTQHLNQLLTGFEVVKLFSQKVFFKIFRIINENLYHREKKNKFYETVYLSSVEIIAYTATAGIIFYGGYRIINEEITAGDFFSFLGGVLILVNSMQVLQRGLVQLKALSPVIERIKFLLDMPEEKDEGIEFEGLKDRIVYKNVSLKIDNNQILKDVNLKINKGEKLGIVGLTGSGKSTVVKILPGLIKDYEGNVFIDDHELREYSVSSLRKHIGVISQDVFIFNDTLRNNLLIAKPDATDEELYQALKKAKADFVFSMENGLDTVLGEKGSRLSGGERQRISIARIFLKDPDILIIDEGTSALDVETEEYVMEEIKEHFSDRTVIMITHRLKILDICDRIAVMDKGTVVEEGTKKELLEKKGIFYRFFSLSQTDDKI
SIO_010081: PERMA_RS02210
subclass of: SO_0000673
so part of: PERMA_RS02210
location: 400604..402319
location: region:400604-402319:1
so has part: feature:400604-402319:1:exon

WP_012676442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400604-402319:1:exon

PERMA_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02215
old locus tag: PERMA_0447
so part of: sequence
location: 402343..403434
location: region:402343-403434:1
so has part: feature:402343-403434:1:exon
subclass of: SO_0000010

position:402343:1
position: 402343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403434:1
position: 403434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402343-403434:1:exon

PERMA_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02215
old locus tag: PERMA_0447
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459786.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoesterase
translation: MVYLVLFFIIILFLTFLFYVEFRPIKKIKIDEKSISSLSESFPEEIYRYNVISHIHTQFSFDSLGKPSDIRRAMEVNEIDFVFVTDHDNDNYRFFEDGKVFAGIEKNTPDGRLLLLGNEVPVISHPNNFEFEHYRWKGEFKEDHLYEIIDIKDGIVWNKLITGLTLIKNILLYPFTRNILHKWNALIPLDKWVDLYFERAKGLKLIGGLDLHIKLVYQEHTHGILIPSYQEGFKWLVNKVFSKSEIKDKKDILEALRKGLLYISLKRKEGYFWGSNGFNIYLFWEKMPVGSSINCDFRELKTVKILKCNNSPVLVTEENRFSYVAYRAGYYHFEVYEYDFKIGNLYFGVRPVAVTNIFEVVNV
SIO_010081: PERMA_RS02215
subclass of: SO_0000673
so part of: PERMA_RS02215
location: 402343..403434
location: region:402343-403434:1
so has part: feature:402343-403434:1:exon

WP_238527226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402343-403434:1:exon

PERMA_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02220
old locus tag: PERMA_0449
so part of: sequence
location: 403427..403972
location: region:403427-403972:1
so has part: feature:403427-403972:1:exon
subclass of: SO_0000010

position:403427:1
position: 403427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403972:1
position: 403972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403427-403972:1:exon

PERMA_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02220
old locus tag: PERMA_0449
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459785.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatase PAP2 family protein
translation: MSEKRRIPNDWQLKIKWNVKLFYLINSRRSRFLDRFYRYYFRLGKSYTLPVFLPFFYYSGGLESLIHLAIALLITGILMPSIKYTFRHKRPYVLLENVNLLEPVTLKSFPSADTAYAFTIFGVMLFYGSLPIILLFFVYAVLIAYGRVYMGAHFPIDVLTGGVIGFLSAVFGYAILGYLSF
SIO_010081: PERMA_RS02220
subclass of: SO_0000673
so part of: PERMA_RS02220
location: 403427..403972
location: region:403427-403972:1
so has part: feature:403427-403972:1:exon

WP_012676059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403427-403972:1:exon

PERMA_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02225
old locus tag: PERMA_0448
so part of: sequence
location: complement(403947..404687)
location: region:403947-404687:-1
so has part: feature:403947-404687:-1:exon
subclass of: SO_0000010

position:403947:-1
position: 403947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404687:-1
position: 404687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403947-404687:-1:exon

PERMA_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02225
old locus tag: PERMA_0448
EC number: 2.6.99.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676614.1
GO function: GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO process: GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyridoxine 5'-phosphate synthase
translation: MRLGVNIDHIATVREARKTYEPDPVKGAIIARDAGADQITFHLREDRRHIQDSDVEKLRAVITEIPLNMEMAATEEMKQIAIRIKPDRVTIVPEKREEITTEGGLDVVSMTDYLREFIKELKDNGINVATFVDPVEEQIKASMEVGADAVEIHTGEYANARSDKERDNEIFRIKKAAVYGRSLGLKVFAGHGLTYTNVQPVAEIEEIEELNIGHSIIANAIFLGLDEAVRKMKKLINEVRRKDIRV
SIO_010081: PERMA_RS02225
subclass of: SO_0000673
so part of: PERMA_RS02225
location: complement(403947..404687)
location: region:403947-404687:-1
so has part: feature:403947-404687:-1:exon

WP_012676614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403947-404687:-1:exon

PERMA_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02230
old locus tag: PERMA_0450
so part of: sequence
location: 404774..405958
location: region:404774-405958:1
so has part: feature:404774-405958:1:exon
subclass of: SO_0000010

position:404774:1
position: 404774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405958:1
position: 405958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404774-405958:1:exon

PERMA_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02230
old locus tag: PERMA_0450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674313.1
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO process: GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
translation: MVRIFIVFFMLFNLAYAFQVRTGEHKQFYRFVFETGKKVHFEEIPFLDQKVVVLSIEGKPENLIMLKDKDLKKYIKAVDIIKSGDTTKFVFELSDDVSEYKIFTLKKPFRIVIDFIKGAKVKGIQRIEKRYDIDIVKSDRIKTKKVKLIDDPIFSILTKRDLEIEIPESFVGDKKIVVIDPGHGGRDPGAIHNGLVEKDVNLKIAKRLKKIIEKDPRFKVYLTREDDRFVSLYKRTVFAVKKRADIFISIHCNSSPTLKESGTYIYTLNLRGARSKLAKLVEMRENKAVVDYVRVSTNPVVNRIVADLAISSTMTEGLNFAKYLKRYLKDVTDFRDIDSANFAVLKTPGIPSVLIETLYLTDPLDAYLLKNDLFIENFSLSVYNAIVDYFFEKK
SIO_010081: PERMA_RS02230
subclass of: SO_0000673
so part of: PERMA_RS02230
location: 404774..405958
location: region:404774-405958:1
so has part: feature:404774-405958:1:exon

WP_012676286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404774-405958:1:exon

PERMA_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02235
old locus tag: PERMA_0451
so part of: sequence
location: 405958..406725
location: region:405958-406725:1
so has part: feature:405958-406725:1:exon
subclass of: SO_0000010

position:406725:1
position: 406725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405958-406725:1:exon

PERMA_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02235
old locus tag: PERMA_0451
EC number: 2.7.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676422.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III pantothenate kinase
translation: MILGIDIGNTTSEFGFIYNGKRINSYKLRSDHTKTVDDWLIDISAIFSIEGMKKESVKDCVISSVVPPLEDRIYSACKKFLGKKPLRIGKELKVPIKINYKNPEEVGIDRVVNAFAGVKRYGKPLILVDLGTAITFDVVNQKGEYEGGAIFPGIDSSIEALFSKTAKLPKVSIENVKKVVGKTTVESIQSGIFFGYISLIEGMIKRIIREKGFSPKVILTGGSGEIITKGLEIDHIFDMYLSLEGIYDIYSYHGN
SIO_010081: PERMA_RS02235
subclass of: SO_0000673
so part of: PERMA_RS02235
location: 405958..406725
location: region:405958-406725:1
so has part: feature:405958-406725:1:exon

WP_012676422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405958-406725:1:exon

PERMA_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02240
old locus tag: PERMA_0453
so part of: sequence
location: 406927..407184
location: region:406927-407184:1
so has part: feature:406927-407184:1:exon
subclass of: SO_0000010

position:406927:1
position: 406927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407184:1
position: 407184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406927-407184:1:exon

PERMA_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02240
old locus tag: PERMA_0453
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288129.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANEETKAYPFALVGFFVTDKDVNEAFRQNVTPEELEKLQELLKKTIFAEDVDIAIAPFVVPPDQVNDALQQLAEAIFSQEEEQG
SIO_010081: PERMA_RS02240
subclass of: SO_0000673
so part of: PERMA_RS02240
location: 406927..407184
location: region:406927-407184:1
so has part: feature:406927-407184:1:exon

WP_012676661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406927-407184:1:exon

PERMA_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: dapB
locus tag: PERMA_RS02245
old locus tag: PERMA_0454
so part of: sequence
location: 407184..407993
location: region:407184-407993:1
so has part: feature:407184-407993:1:exon
subclass of: SO_0000010

position:407993:1
position: 407993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407184-407993:1:exon

PERMA_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: dapB
locus tag: PERMA_RS02245
old locus tag: PERMA_0454
EC number: 1.17.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288130.1
GO function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4-hydroxy-tetrahydrodipicolinate reductase
translation: MVKVVISGIMGRMGRTIARLAYEDPEVQIAGGVESPDCVHFHENVKDILNKEDVDAPITADLSKIIERADVIIDFAGSTEAVLGHVRLAAADQNRKCMVIGTTGFSDEELEEIRQLSKDIPIVLAPNMSIGVNLLFKLVEDAAKALKDKGFDIEVVEMHHRYKKDSPSGTAVKIVDILKEATGIQKVIYGREGIYENGRPSDEIAVFALRGGDVVGEHTVIFAGLGERIELTHRAGSRDIFAKGAVEAAKWIKDKPPGLYDMMDVLGLK
SIO_010081: PERMA_RS02245
subclass of: SO_0000673
so part of: PERMA_RS02245
location: 407184..407993
location: region:407184-407993:1
so has part: feature:407184-407993:1:exon

WP_012675267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407184-407993:1:exon

PERMA_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02250
old locus tag: PERMA_0456
so part of: sequence
location: 407997..408239
location: region:407997-408239:1
so has part: feature:407997-408239:1:exon
subclass of: SO_0000010

position:407997:1
position: 407997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408239:1
position: 408239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407997-408239:1:exon

PERMA_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02250
old locus tag: PERMA_0456
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674831.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AtpZ/AtpI family protein
translation: MKEKRKGFTEYLSIGAIGLHLVSGIIVGVLIGYLLDQYFDTSPYLTIIFFFFGIAAGFWNMYKDVQRYIISEEEKEKEKD
SIO_010081: PERMA_RS02250
subclass of: SO_0000673
so part of: PERMA_RS02250
location: 407997..408239
location: region:407997-408239:1
so has part: feature:407997-408239:1:exon

WP_012675478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407997-408239:1:exon

PERMA_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02255
old locus tag: PERMA_0455
so part of: sequence
location: complement(408236..409219)
location: region:408236-409219:-1
so has part: feature:408236-409219:-1:exon
subclass of: SO_0000010

position:408236:-1
position: 408236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409219:-1
position: 409219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408236-409219:-1:exon

PERMA_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02255
old locus tag: PERMA_0455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460151.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional oligoribonuclease/PAP phosphatase NrnA
translation: MEGEVAVIERIKREEGEILIVTHENPDGDGIGSMIALYRFLIKEGKNVRMAMKDDLPYIYNFLPDSDKIEKLLPENTYNLIILVDAAGLYRTGVDIKGREVIRIDHHVGGIKESDYDYVDPSAPSTTYMVGLILKRWDEKQIDKEIAECLYTGLMTDTGSFRYNNVDERAFEMAEFLVEKGADPSYISTMVYERNRPNVIHLLHRVLSTLKMDYEGHIASLVVRRSFIDEVGALEEETEGFVNFAKSIEDVDVAFIMIQKPDLKTWRVSLRGKGKVNVQNIARMFGGGGHKDAAGCRIIGSEENVRKMLVDAIKTEIQKSLKPVKVA
SIO_010081: PERMA_RS02255
subclass of: SO_0000673
so part of: PERMA_RS02255
location: complement(408236..409219)
location: region:408236-409219:-1
so has part: feature:408236-409219:-1:exon

WP_012676782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408236-409219:-1:exon

PERMA_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: nth
locus tag: PERMA_RS02260
old locus tag: PERMA_0457
so part of: sequence
location: complement(409233..409880)
location: region:409233-409880:-1
so has part: feature:409233-409880:-1:exon
subclass of: SO_0000010

position:409233:-1
position: 409233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409880:-1
position: 409880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409233-409880:-1:exon

PERMA_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: nth
locus tag: PERMA_RS02260
old locus tag: PERMA_0457
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460152.1
GO function: GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endonuclease III
translation: MKKDKKGNLTEQAVIEGLKKHFPEPWIDLKFSNPFQLLVATILAAQATDKKVNEVTAVFFKKYPDPESIAKAPLEQIENDIKQINFYRRKAKLLKECCEAIVKEFNGKIPDNIDDLTKLPGVGRKTASVILVNAFNKPAIVVDTHVKRVSQRLGITESNNPDRIEKDLAEFFSKENWIFISKAMVLFGRYICKAKNPKCKECALLDICPYDKKNL
SIO_010081: PERMA_RS02260
subclass of: SO_0000673
so part of: PERMA_RS02260
location: complement(409233..409880)
location: region:409233-409880:-1
so has part: feature:409233-409880:-1:exon

WP_015898910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409233-409880:-1:exon

PERMA_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02265
old locus tag: PERMA_0458
so part of: sequence
location: complement(409882..410772)
location: region:409882-410772:-1
so has part: feature:409882-410772:-1:exon
subclass of: SO_0000010

position:409882:-1
position: 409882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410772:-1
position: 410772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409882-410772:-1:exon

PERMA_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02265
old locus tag: PERMA_0458
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460153.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5'-3' exonuclease H3TH domain-containing protein
translation: MDKKLVLVDGSSYLYRAFYALPPLTSPKGEPTGAIYGFIRMISTLIKELNPEYMAVVFDLPGKTFRHEKYKEYKATRKETPDELKVQIPKIKEIIKLWGIKILEIPGYEADDIIATIAKKAVDKGFEVIIVTPDKDMMQLIDEKVFILNPVTGEIFNREKVKEKYGIYPEQFVDYLSMIGDTVDNIIGVRGVGPKTAEKLLNQYGNLKNILEHKDQLKPKLKEAFEEAEERLKENIFLVSLEKNIDIDIQPEDLKKEKADLLKLRDIFKELGFKSLLKDIEKKKVIEKKVEQRTLF
SIO_010081: PERMA_RS02265
subclass of: SO_0000673
so part of: PERMA_RS02265
location: complement(409882..410772)
location: region:409882-410772:-1
so has part: feature:409882-410772:-1:exon

WP_012675313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409882-410772:-1:exon

PERMA_RS10825
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10825
old locus tag: PERMA_0459
so part of: sequence
location: complement(410781..411566)
location: region:410781-411566:-1
so has part: feature:410781-411566:-1:exon
subclass of: SO_0000010

position:410781:-1
position: 410781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411566:-1
position: 411566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410781-411566:-1:exon

PERMA_RS10825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10825
old locus tag: PERMA_0459
inference: COORDINATES: protein motif:HMM:NF013700.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MGKNYTKVYLTVLGLISVISLFIALKSSGNREEIEKLRKEVNLLREELTKKEEQLKKAVEEKEKLARKLKSIEEKIKKANKTLRRKGIKIKLPQGGLFIPADRKENLEFYASTLENSMEKLLKVMAEIPVGVPLYGRLTSRFGYRKDPFNGKLAFHAGIDLRAQPRQPVFATANGIVKFAGWSGGYGKLVIIKHKYGYETYYGHLFKIRVKKGQRVKAGTVIGYAGSTGRSTGVHLHYEIRRYGRLLNPLKYLYLNRYNAF
SIO_010081: PERMA_RS10825
subclass of: SO_0000673
so part of: PERMA_RS10825
location: complement(410781..411566)
location: region:410781-411566:-1
so has part: feature:410781-411566:-1:exon

WP_012676761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:410781-411566:-1:exon

PERMA_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: hemB
locus tag: PERMA_RS02275
old locus tag: PERMA_0460
so part of: sequence
location: complement(411571..412548)
location: region:411571-412548:-1
so has part: feature:411571-412548:-1:exon
subclass of: SO_0000010

position:411571:-1
position: 411571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412548:-1
position: 412548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411571-412548:-1:exon

PERMA_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: hemB
locus tag: PERMA_RS02275
old locus tag: PERMA_0460
EC number: 4.2.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674839.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO process: GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porphobilinogen synthase
translation: MGFPSVRPRRLRKNENIRRLVRETELSVNDFIYPLFIEEGENIKIEIPSMPGIYRYSLDRIDEELEQVVDLGIPAVLLFGIPKHKDAVGSETWNDEGIIQRTIRYIKERCPDLYVITDVCFCEYTEHGHCGVLHDHEVANDPTLENTKKQVVSHARAGADMVAPSGMMDGVVKAIREALDQAGYTDIPIMSYSAKYASAYYGPFRDAAESSPAFGDRRSYQMDPANRREALKEVQLDVEEGADIIMVKPALAYLDIISDLRENFNLPVAAYNVSGEYSMVKAAGKLGWIDEEKVMMETLTSIKRAGADIIITYHAKEAAKILKTG
SIO_010081: PERMA_RS02275
subclass of: SO_0000673
so part of: PERMA_RS02275
location: complement(411571..412548)
location: region:411571-412548:-1
so has part: feature:411571-412548:-1:exon

WP_012675936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411571-412548:-1:exon

PERMA_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02280
old locus tag: PERMA_0461
so part of: sequence
location: complement(412594..413298)
location: region:412594-413298:-1
so has part: feature:412594-413298:-1:exon
subclass of: SO_0000010

position:412594:-1
position: 412594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413298:-1
position: 413298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412594-413298:-1:exon

PERMA_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02280
old locus tag: PERMA_0461
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RsmE family RNA methyltransferase
translation: MGYERFIGQVEDGYAYLTEDELKHAKVKRVKTGDRIEINDLKGNVYLTEVLEITKRYIKCRIIEKIKVEEEDFRITLYQCMPNQLSKIDDIIEGVSQLGVYRFVPVISERSAVKTKDVLKKIKKWEKKALNSIKQCKRLYPVIIENPVKLEDIKSDDEGKFVFYEKEEKRTVKEFLDKKLKNVSVVIGPEGGFTEGEIKILQDKGFIPLTMGKNILRMETAVITGICQIRFLFD
SIO_010081: PERMA_RS02280
subclass of: SO_0000673
so part of: PERMA_RS02280
location: complement(412594..413298)
location: region:412594-413298:-1
so has part: feature:412594-413298:-1:exon

WP_015899031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412594-413298:-1:exon

PERMA_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02285
old locus tag: PERMA_0462
so part of: sequence
location: complement(413298..414116)
location: region:413298-414116:-1
so has part: feature:413298-414116:-1:exon
subclass of: SO_0000010

position:414116:-1
position: 414116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413298-414116:-1:exon

PERMA_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02285
old locus tag: PERMA_0462
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675117.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter permease
translation: MMLEILQIPFMQKALIGGIILAVLLSVLSLFINLKNWSFITVGISHAAFGGLAIGLFLGISPPLTGMVFAALIGLFIGYISRKGDIHEDISIGILFSLSMALGVIVLTFTPNYSSDMFTFLFGNILTITGEEIYMLLLFSFLSLAFIAFFFQKIMFCCYNEDVAYVSGINTGFLYYGIILIISIATILAVKLVGVILSSAMMILPAALSRQVFWHYKKILISSVIISIFMVLTGIFISFYYNLPAGATIVFIYSMTFAFVILIKKITGLKSV
SIO_010081: PERMA_RS02285
subclass of: SO_0000673
so part of: PERMA_RS02285
location: complement(413298..414116)
location: region:413298-414116:-1
so has part: feature:413298-414116:-1:exon

WP_012675334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413298-414116:-1:exon

PERMA_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02290
old locus tag: PERMA_0463
so part of: sequence
location: complement(414124..414891)
location: region:414124-414891:-1
so has part: feature:414124-414891:-1:exon
subclass of: SO_0000010

position:414124:-1
position: 414124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414891:-1
position: 414891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414124-414891:-1:exon

PERMA_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02290
old locus tag: PERMA_0463
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674226.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal ABC transporter ATP-binding protein
translation: MKILEVNDLSVRINERTIIENITFSVEKGEIIAIVGPNGGGKTTLIKSILGFIQPYKGYIKLLGKPPGEAVKTGKIGYLPQKSSVPKDFPFSVLDVVMLGLINKKIPKEKKLKKAREYLKYVGMERFENKPYSSLSGGQQQRVSIARVLVSDPEIIFLDEPSTGIDVVAQESFYDFLQRLKKEKNMTIVMVSHDIGVVGRFVDKVAGLNRFLHFYGHPKEFFKKEVLENIYGAEVELIIHSPECVACEHFHIDFK
SIO_010081: PERMA_RS02290
subclass of: SO_0000673
so part of: PERMA_RS02290
location: complement(414124..414891)
location: region:414124-414891:-1
so has part: feature:414124-414891:-1:exon

WP_012676900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414124-414891:-1:exon

PERMA_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02295
old locus tag: PERMA_0464
so part of: sequence
location: complement(414888..415913)
location: region:414888-415913:-1
so has part: feature:414888-415913:-1:exon
subclass of: SO_0000010

position:414888:-1
position: 414888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415913:-1
position: 415913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414888-415913:-1:exon

PERMA_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02295
old locus tag: PERMA_0464
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546433.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc-binding dehydrogenase
translation: MRAAYYEEHGSYENIKIGELPQPEIKEDEVLVKVKAFSLNHLDIWIMEGKYPAKIPMPHIFGSDASGVVVKKGSAVKNVKEGDSVIVYPGLSCGICERCLSGRDNECKSYSILGVLTDGVSAEYVKVPALNLFKIPEGLSFEEASAIGITYTTMWHSLVTRSGIKAGDTVLIHGGGSGVGTAGIQIAKMLGAKVITTVGDNWKIEKALGLGADHVINYKDEDFVERVKQITDGEMCDIVVDHIGEATFSGSIACCKKGGSVVTFGATTGGEPKINLRAVFGKNIDIHGVYMGTKGEVSHYLKFFPEKLRPVIDSVFSFEDVKKAYEKLLSRQFFGKIVVRL
SIO_010081: PERMA_RS02295
subclass of: SO_0000673
so part of: PERMA_RS02295
location: complement(414888..415913)
location: region:414888-415913:-1
so has part: feature:414888-415913:-1:exon

WP_012675944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414888-415913:-1:exon

PERMA_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: feoB
locus tag: PERMA_RS02300
old locus tag: PERMA_0465
so part of: sequence
location: complement(415915..418080)
location: region:415915-418080:-1
so has part: feature:415915-418080:-1:exon
subclass of: SO_0000010

position:415915:-1
position: 415915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418080:-1
position: 418080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415915-418080:-1:exon

PERMA_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: feoB
locus tag: PERMA_RS02300
old locus tag: PERMA_0465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545340.1
GO function: GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO process: GO:0006826 - iron ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferrous iron transport protein B
translation: MADKVIKVAVAGNPNTGKTTLINALAGTNLHVGNWPGVTVEKKEAIIEYKGYKIHLVDLPGTYSLSNDVAEEKIAIDFLVKEKPDLVIDVVDATNLERNLYLTIQLLEIDLPLVIALNMWDEAQEKGIRIDVNKLEKLLCCKVIPTTAIKGEGVSEILDAVIQIYKNKERFHCSLHLEDQLEDELRKLKECIKNIQPLLLDIYPERFLLLSLVEGNTFFIDLAVDSRILNQAKLIREKLEKLYHRDISTLLVEERYSIIISIYEQCVRKTSEEKFDLTLFLDKIFLHKVLGFPIFFFFMWLLFKFTFELSAPYVDWLDSSLSDVIAPIVYHFLTDIGTSPWLRSLITEGIIGGVGFVLVFVPVLFFLYIFMAILEGSGYMARAAFLMDRVMAVFGLSGKSFIPMLIGFGCNVPAVYATRTLENPKEKILTTLMIPFMSCGARLTVYAFFVTIFFTEYQTAVILFLYILGIIVAAVVAILLQRFVFKAEAIPFILELPPYRFSTVRFIIRNAWIKTKAFLYEAGTFILATSIVIWFLLHFPIGVKKPEDSLFGKISHTIAPVFYPLGFGNWEAAGSLISGFVAKEVVLSTMGNIYSGEIVEEKPEEVKLSEGLLEIGKGFINANIDMGKNFLSIFGLYKMEAEEEEEDSSLIKAVRDSFTPLTAISFLVFLLLYTPCMATVFAIKQELNSWRWTGVSILISFTSAWIMAFIVYNAGKIIAGG
SIO_010081: PERMA_RS02300
subclass of: SO_0000673
so part of: PERMA_RS02300
location: complement(415915..418080)
location: region:415915-418080:-1
so has part: feature:415915-418080:-1:exon

WP_012675789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415915-418080:-1:exon

PERMA_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02305
old locus tag: PERMA_0466
so part of: sequence
location: complement(418070..418303)
location: region:418070-418303:-1
so has part: feature:418070-418303:-1:exon
subclass of: SO_0000010

position:418070:-1
position: 418070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418303:-1
position: 418303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418070-418303:-1:exon

PERMA_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02305
old locus tag: PERMA_0466
inference: COORDINATES: protein motif:HMM:NF015956.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FeoA family protein
translation: MRLSELPAGSFCKIKELRFDPALKRKLLEMGLIPGQTVEVIQVSPFGGPVKIKIKDYCLAVRKADADKIIVEECNGR
SIO_010081: PERMA_RS02305
subclass of: SO_0000673
so part of: PERMA_RS02305
location: complement(418070..418303)
location: region:418070-418303:-1
so has part: feature:418070-418303:-1:exon

WP_012676877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418070-418303:-1:exon

PERMA_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02310
old locus tag: PERMA_0467
so part of: sequence
location: complement(418389..419069)
location: region:418389-419069:-1
so has part: feature:418389-419069:-1:exon
subclass of: SO_0000010

position:418389:-1
position: 418389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419069:-1
position: 419069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418389-419069:-1:exon

PERMA_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02310
old locus tag: PERMA_0467
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673729.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-2 protease family protein
translation: MEFDITKLIFMIPALMFAVIIHELGHGVIAYRLGDPTAKISGRLTFNPLPHVDPVGTLLVPIILILAKSPILFGWAKPVPINPANFRKLGYRKGMAVTAAAGPSVNFIAAVFFGISYQILSSDAVLGTLVSVFGPGIIKSVVTPLLIFFQYSVSINVILAIFNLLPIPPLDGGRVLMSILPPELEHKLEPVEQYGFIIVIILLFIGVLNIIIIPPYMYLTRILLGF
SIO_010081: PERMA_RS02310
subclass of: SO_0000673
so part of: PERMA_RS02310
location: complement(418389..419069)
location: region:418389-419069:-1
so has part: feature:418389-419069:-1:exon

WP_012676653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418389-419069:-1:exon

PERMA_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: murF
locus tag: PERMA_RS02315
old locus tag: PERMA_0469
so part of: sequence
location: 419149..420471
location: region:419149-420471:1
so has part: feature:419149-420471:1:exon
subclass of: SO_0000010

position:419149:1
position: 419149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420471:1
position: 420471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419149-420471:1:exon

PERMA_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: murF
locus tag: PERMA_RS02315
old locus tag: PERMA_0469
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545672.1
GO function: GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
translation: MKIKEILEIVKGRPLKLRDADKEIKRFIIDSRKAQKDSFFVPLKGSKADGHDFIDDALKKGSSGYLTSIETDYKNGILVDDTLKALTEIGIFKRKKLKKAVGITGTSGKTTTKEILRFLLSDIFRVYATEGNYNNEIGLPLTLSNIPENTEVGVFELGASKRGDISKLVSISKPEVRVLTSVGHGHIEGFGSFEGVVQGKGEIFDGGEISVLPEDLKIYYMDRLKKYVTFGISDYADIKISEINITPEGTAGTVSYKNDKIRITVPVYSRALFNNIAAALSVLYALDINPVRSAEKLRDFSLPEGRGKVLRKGSLTVIDDSYNANPLSVKNAIETLSGIPSFRVLILGDMLELGDLSEQMHIKVGKEILSSDIDLILLYGRETYHTYTVIKDKKNSYHFDDKEKLYRKLMDSIKDKECVLLVKGSRGMRMEDIIEKVLQS
SIO_010081: PERMA_RS02315
subclass of: SO_0000673
so part of: PERMA_RS02315
location: 419149..420471
location: region:419149-420471:1
so has part: feature:419149-420471:1:exon

WP_012676952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419149-420471:1:exon

PERMA_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02320
old locus tag: PERMA_0468
so part of: sequence
location: complement(420446..421114)
location: region:420446-421114:-1
so has part: feature:420446-421114:-1:exon
subclass of: SO_0000010

position:420446:-1
position: 420446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421114:-1
position: 421114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420446-421114:-1:exon

PERMA_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02320
old locus tag: PERMA_0468
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFITDVGKLLDAQDKILTELGNLDEELIISGSFGFVRAYSQHRITDTIQIYTENPENVSEKLKDVIDIREVSISERWQIPEKVPQVSVSTVKDGINLKINLIKDIFQDMFEKTKLEIGLYLEDLEGIYHRILLDLINCPENILYAVDIAYIDDEYHLIDFIEIFSKNTGIKSDSVVESLKKLLEVMEKDRFSIDRTLREHSVNISSNVMKRWIKAKIEELSQ
SIO_010081: PERMA_RS02320
subclass of: SO_0000673
so part of: PERMA_RS02320
location: complement(420446..421114)
location: region:420446-421114:-1
so has part: feature:420446-421114:-1:exon

WP_012675849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420446-421114:-1:exon

PERMA_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: gap
locus tag: PERMA_RS02325
old locus tag: PERMA_0470
so part of: sequence
location: 421179..422186
location: region:421179-422186:1
so has part: feature:421179-422186:1:exon
subclass of: SO_0000010

position:421179:1
position: 421179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422186:1
position: 422186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421179-422186:1:exon

PERMA_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: gap
locus tag: PERMA_RS02325
old locus tag: PERMA_0470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010880662.1
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I glyceraldehyde-3-phosphate dehydrogenase
translation: MAIKVGINGFGRIGRNFFRACVDNPEIEIVGINDLTDAYTLSHLLKYDSVHGRFSKPVEAKGNSIVVDGKEIEVTAIKDPAQLPWKDLGVDIVIESTGVFRDREGAGKHLQAGAKKVIISAPGKNPDLTVVLGVNEDQYDPENHHIISNASCTTNCLAPVAKVLNDEFGIVKGYMVTVHAYTNDQRILDLPHKDLRRARAAATNIIPTTTGAAKAVGEVLPELKGKLDGTARRVPVADGSLVDLTVILEREVTEEEINSKMKEYAEGKMKGILEYTEDPIVSQDIVGNPHSSIFDALSTKVIGGNFVHVASWYDNEWGYSNRLKDLVLFMAEKGL
SIO_010081: PERMA_RS02325
subclass of: SO_0000673
so part of: PERMA_RS02325
location: 421179..422186
location: region:421179-422186:1
so has part: feature:421179-422186:1:exon

WP_012676093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421179-422186:1:exon

PERMA_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02330
old locus tag: PERMA_0471
so part of: sequence
location: complement(422405..422674)
location: region:422405-422674:-1
so has part: feature:422405-422674:-1:exon
subclass of: SO_0000010

position:422405:-1
position: 422405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422674:-1
position: 422674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422405-422674:-1:exon

PERMA_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02330
old locus tag: PERMA_0471
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MLIQKQEKAVKDLVRGFEIINIDSDIVNIGAKFYREYRKKGITLSTVDCLIMATAKKYGLKIITHNVKHYPEENLLSEFSRNISKNKNS
SIO_010081: PERMA_RS02330
subclass of: SO_0000673
so part of: PERMA_RS02330
location: complement(422405..422674)
location: region:422405-422674:-1
so has part: feature:422405-422674:-1:exon

WP_012676098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422405-422674:-1:exon

PERMA_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02335
old locus tag: PERMA_0472
so part of: sequence
location: complement(422793..423104)
location: region:422793-423104:-1
so has part: feature:422793-423104:-1:exon
subclass of: SO_0000010

position:422793:-1
position: 422793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423104:-1
position: 423104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422793-423104:-1:exon

PERMA_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02335
old locus tag: PERMA_0472
inference: COORDINATES: protein motif:HMM:NF019009.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system CcdA family antitoxin
translation: MKVYDRHIKDIIVWNKIHTERYNYGNNKKTISLPEELYREAEGISHNFSEIVKEALSEYIKRKKIEKTISTAGAFKDLKETGVEYVDKMRQEDLSIEEERINR
SIO_010081: PERMA_RS02335
subclass of: SO_0000673
so part of: PERMA_RS02335
location: complement(422793..423104)
location: region:422793-423104:-1
so has part: feature:422793-423104:-1:exon

WP_012675263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422793-423104:-1:exon

PERMA_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: trpS
locus tag: PERMA_RS02340
old locus tag: PERMA_0473
so part of: sequence
location: complement(423217..424470)
location: region:423217-424470:-1
so has part: feature:423217-424470:-1:exon
subclass of: SO_0000010

position:423217:-1
position: 423217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424470:-1
position: 424470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423217-424470:-1:exon

PERMA_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: trpS
locus tag: PERMA_RS02340
old locus tag: PERMA_0473
EC number: 6.1.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547896.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO process: GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tryptophan--tRNA ligase
translation: MKKVLSGMRPTGRLHLGHYLGVIKNWLQLQEKYECKFFIADWHALTNKYKETDQLKENVRQMIIDWLSCGIDPEKATLFVQSGVKEHAELALLFSMITPKSWLELNPSYKDLKFNLYYQYMRDFLAGKQIKIILTPPPESFDQALEKATGKQKNKIFEEYLREAFHRAFYNQKGIDFKWLKETLMRFGIQKKIVEEVVRNLEEGDVGKDIDTLGFLAYPVLQAADILIYKADAVPVGEDQLPHIELTREIARRFNNLYDQIFPEPEALLTEESKLPGIDGRKMSKSYNNAIYLSDDRETVNRKVLEMKTDPQRVRRTDPGNPDVCIVFEYHNIFTDSETVSDIDKKCRKAEIGCVDCKKILAENLNSFLDPIRERRKEIEKDIPKYEKVLQEGTEKARAVASETMVEVRKAMKLWEF
SIO_010081: PERMA_RS02340
subclass of: SO_0000673
so part of: PERMA_RS02340
location: complement(423217..424470)
location: region:423217-424470:-1
so has part: feature:423217-424470:-1:exon

WP_012676338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423217-424470:-1:exon

PERMA_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02345
old locus tag: PERMA_0475
so part of: sequence
location: 424549..426999
location: region:424549-426999:1
so has part: feature:424549-426999:1:exon
subclass of: SO_0000010

position:424549:1
position: 424549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426999:1
position: 426999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424549-426999:1:exon

PERMA_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02345
old locus tag: PERMA_0475
inference: COORDINATES: protein motif:HMM:NF012492.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase
translation: METLRYYRNRIAYSRIIPPVFPEYGQFDFKNEKLKSFLERKDIKLYSHQVEGLNAVKEGKNIVVTTPTASGKSFIYILSILERLKENPETKGIIIFPLKALARDQYGKIMDLILETGIDARVDVYDGDTDREKRQEIKKDPPTFLITTPDMLNAGILPYHTGWSSFFENLDFIVLDEIHAYRGILGSHIANIVRRLKRITGYYRTKKPVFIMNSATVHNPSSFASKLIGEEVVEISRSGAPSPEREIQIFRNLRSSETAELIANTVIEDISSIVFVDSRKEAEILSLRVKDILVKKGRDDLVDKVSPYRSGYTPAERREIEFKLLTKNILAVISTSALEMGIDIGDLDNCILVGYPGTLAQLWQRFGRAGRRDRKAYNILIPKRNALDQYFVKNPEELFYRKMEEPVINPENRYILKKHLPVMASEIPIKLDELSENEKEVARELYKEGIIRFSNNKLYASRQKPFSIRSAGESFRIVETVSGRVIGDISEDIVLYEAHPGAVYLHNGEKYIVEHLDMEGKVVYVVHSNISYITEPLKESFIEIIKVEDFRKAGSIEIFRGKVKVKTTVVGYSMRDIEFDEKMNEELFDPDKYLSREFETVAFWWTMPQEWEEEIIHRNLKHNARMLYSFIIQKGKLYTGKFVYSDLVFENLLKFRKSGDITAFEFALKATESFVSRLSQKEKEQFNEYKRRIKERKNGFLGGLHGVEHGLIGIYPLFAMNDRWDIGGLSTPFFPETGRPTVFIYDGYEGGVGYSEVGFNRLKEMMESTYKTISKCGCISGCPSCIYSPKCGNSNDYLDKTASIILSHRILKELSK
SIO_010081: PERMA_RS02345
subclass of: SO_0000673
so part of: PERMA_RS02345
location: 424549..426999
location: region:424549-426999:1
so has part: feature:424549-426999:1:exon

WP_012675237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424549-426999:1:exon

PERMA_RS02350
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02350
old locus tag: PERMA_0474
so part of: sequence
location: complement(426992..427840)
location: region:426992-427840:-1
so has part: feature:426992-427840:-1:exon
subclass of: SO_0000010

position:426992:-1
position: 426992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427840:-1
position: 427840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426992-427840:-1:exon

PERMA_RS02350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02350
old locus tag: PERMA_0474
EC number: 2.3.1.286
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546300.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Sir2 family NAD-dependent protein deacetylase
translation: MLDKTSEEINRAKEVIKKADAILITAGAGMGVDSGLPDFRGTEGFWRAYPIAKKLGLRFEELANPRWFRENPRLAWAFYGHRLHLYRNTQPHEGFNILRRLGESKKGGYFVFTSNVDGQFQKAGFDEKKIVEIHGSIHHLQCVQPCCDQIWSADGVEIDIDMESFEAKDPLPSCPYCGGLARPNILMFGDWEWIPHRTSGQEFRLDRWLFDVDDKGYEVAIIEIGAGKAVPTVRMFSERVKERIFGTLIRINPRDYDIPSGRDISIPLGGLEGIKAITEGII
SIO_010081: PERMA_RS02350
subclass of: SO_0000673
so part of: PERMA_RS02350
location: complement(426992..427840)
location: region:426992-427840:-1
so has part: feature:426992-427840:-1:exon

WP_012675549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426992-427840:-1:exon

PERMA_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02355
so part of: sequence
location: 427971..428222
location: region:427971-428222:1
so has part: feature:427971-428222:1:exon
subclass of: SO_0000010

position:427971:1
position: 427971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428222:1
position: 428222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427971-428222:1:exon

PERMA_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02355
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METEKQDRELLKILINTLDQLDFLVKINSKYLSENKDLQLIYLQKLKNIKRLIVSQKTLICQKNLELLLIDIERIKSTLEVPR
SIO_010081: PERMA_RS02355
subclass of: SO_0000673
so part of: PERMA_RS02355
location: 427971..428222
location: region:427971-428222:1
so has part: feature:427971-428222:1:exon

WP_041530861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427971-428222:1:exon

PERMA_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02360
so part of: sequence
location: 428219..428617
location: region:428219-428617:1
so has part: feature:428219-428617:1:exon
subclass of: SO_0000010

position:428219:1
position: 428219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428617:1
position: 428617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428219-428617:1:exon

PERMA_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIKKLLLLPIIFILLAKNVFAEQLYHLANQDIHNNFIKIALNFEKGNFAIIPKLISRESMACIDRFKISIAASRNDPCNCIREINENLKGDKLIFSLAFCNYILYLRKNKDIDLLNINTFLFTKYKTEELK
SIO_010081: PERMA_RS02360
subclass of: SO_0000673
so part of: PERMA_RS02360
location: 428219..428617
location: region:428219-428617:1
so has part: feature:428219-428617:1:exon

WP_041530862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428219-428617:1:exon

PERMA_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02365
old locus tag: PERMA_0476
so part of: sequence
location: 428614..429453
location: region:428614-429453:1
so has part: feature:428614-429453:1:exon
subclass of: SO_0000010

position:428614:1
position: 428614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429453:1
position: 429453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428614-429453:1:exon

PERMA_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02365
old locus tag: PERMA_0476
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTIKNVSSVVFLLLAIVFQILCISAYANDAYSSEEVLIRKKLRENGKKLQENSKEIKSLLNELQENLKKIEKECGTPVKNKAKEEYCRKSKVYETWNYYIKLFDALKKQEKTLMQRYNLLKDYRSSGVTDHQQEFKAFLRESKDTGRKIVAVYTSMKDFLPEREAKLLEKKIRNLKKYLKRQKKIEEFSNQLGDSVDIEIIRSHTRDAIYEINQQREAIRIVLLGFYNTYSGLKNNLSNISLEEIFEVAKPLLKKQKEEIEIGGEENEEITEYFFEDL
SIO_010081: PERMA_RS02365
subclass of: SO_0000673
so part of: PERMA_RS02365
location: 428614..429453
location: region:428614-429453:1
so has part: feature:428614-429453:1:exon

WP_012676439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428614-429453:1:exon

PERMA_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02370
so part of: sequence
location: 429416..429874
location: region:429416-429874:1
so has part: feature:429416-429874:1:exon
subclass of: SO_0000010

position:429416:1
position: 429416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429874:1
position: 429874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429416-429874:1:exon

PERMA_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: MotA/TolQ/ExbB proton channel family protein
translation: MKRSQSISLKTFKYSYLFSLLILIVGFMMFRENIILTTKWLLNKGGIITIFIIIISVLSLGSLIWDIIDKGKPSEKVLFVLSFLEVHATTLGLLGSIIALAFKSPSIFENDRINNAALMNVLSEAWLSTIAGLVVTLIVSLILSYEKSKGGD
SIO_010081: PERMA_RS02370
subclass of: SO_0000673
so part of: PERMA_RS02370
location: 429416..429874
location: region:429416-429874:1
so has part: feature:429416-429874:1:exon

WP_041530863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429416-429874:1:exon

PERMA_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02375
old locus tag: PERMA_0477
so part of: sequence
location: 429875..430273
location: region:429875-430273:1
so has part: feature:429875-430273:1:exon
subclass of: SO_0000010

position:429875:1
position: 429875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430273:1
position: 430273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429875-430273:1:exon

PERMA_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02375
old locus tag: PERMA_0477
inference: COORDINATES: protein motif:HMM:NF014525.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: biopolymer transporter ExbD
translation: MKFRQGGGKVSVAFIDVFFNLMFLFLILAIIHNSSNEATELDAKDREKNTGNMQILDDSYYIGLKNNKWVVSKDNREVLISDFEEIIKWIKQNKPTSVVILADSKKRIRMNQVFKIIEAIQNSGGNIYYAFQ
SIO_010081: PERMA_RS02375
subclass of: SO_0000673
so part of: PERMA_RS02375
location: 429875..430273
location: region:429875-430273:1
so has part: feature:429875-430273:1:exon

WP_012675682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429875-430273:1:exon

PERMA_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02380
old locus tag: PERMA_0478
so part of: sequence
location: 430260..430928
location: region:430260-430928:1
so has part: feature:430260-430928:1:exon
subclass of: SO_0000010

position:430260:1
position: 430260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430928:1
position: 430928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430260-430928:1:exon

PERMA_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02380
old locus tag: PERMA_0478
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHSNRKKIIFFSMVVMILLMFKHINQKHPISLNKSDIQKKQHPSYRNLIKVDSHQIHSYKKTKEARNNYKHNTLPVKIKLHLSKDVIFLLLNKNSKVFVFTGRGKNSSILGYLDSDLRIKELSNIPDTIIGYQIKLLSAERRLIYEKNYICNKLNCKLFLQLDPRLKIIIQNLVKKEIKNRNISKIVSVNVSLFAQKGYLYLTIDSIQLEGKKIPIKKVYPI
SIO_010081: PERMA_RS02380
subclass of: SO_0000673
so part of: PERMA_RS02380
location: 430260..430928
location: region:430260-430928:1
so has part: feature:430260-430928:1:exon

WP_012676681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430260-430928:1:exon

PERMA_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02385
old locus tag: PERMA_0479
so part of: sequence
location: 430938..431465
location: region:430938-431465:1
so has part: feature:430938-431465:1:exon
subclass of: SO_0000010

position:430938:1
position: 430938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431465:1
position: 431465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430938-431465:1:exon

PERMA_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02385
old locus tag: PERMA_0479
inference: COORDINATES: protein motif:HMM:NF013618.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MILRIFLMVLLNLSMVPNLFAETIDKNECIFKYSRTYSLEELFKEMYKLSKKFDLDPDLIYSIIYVESKWDPCAVSHKGAIGLMQIMPTTALIFDKNLKTEELFDPIINMEIGILYFKALLSYYEQFHPKAIAIKKALIAYNAGPYAKSIPSESKNYVKKVFKIFYKLKSKEAKR
SIO_010081: PERMA_RS02385
subclass of: SO_0000673
so part of: PERMA_RS02385
location: 430938..431465
location: region:430938-431465:1
so has part: feature:430938-431465:1:exon

WP_012675538.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:430938-431465:1:exon

PERMA_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02390
so part of: sequence
location: 431462..431875
location: region:431462-431875:1
so has part: feature:431462-431875:1:exon
subclass of: SO_0000010

position:431462:1
position: 431462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431875:1
position: 431875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431462-431875:1:exon

PERMA_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKSGFIIMTFIALFLFSCTPKGVNTTLQKTNYKKTPLLRISSKKAQILEAIELNLKQGKFDEAVKQCEDIVYGDYENMGVKCIASTYYSLAYLLQGDIETFLSVGNYMEEFCSGFKTIPKQTEVLINLYNNWNRKS
SIO_010081: PERMA_RS02390
subclass of: SO_0000673
so part of: PERMA_RS02390
location: 431462..431875
location: region:431462-431875:1
so has part: feature:431462-431875:1:exon

WP_041530864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431462-431875:1:exon

PERMA_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02395
so part of: sequence
location: 431887..432255
location: region:431887-432255:1
so has part: feature:431887-432255:1:exon
subclass of: SO_0000010

position:431887:1
position: 431887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432255:1
position: 432255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431887-432255:1:exon

PERMA_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQILTGILILVILLIAGSFFLQGKKENLLNLPTQTDVKTSKQHTKDVKTQQNSYSQKEELKDELEDNQEYTSKDNSEKHETIDEKIEHYSSFYDNEIYKDKVEELDKNLEDLADKTAERIFN
SIO_010081: PERMA_RS02395
subclass of: SO_0000673
so part of: PERMA_RS02395
location: 431887..432255
location: region:431887-432255:1
so has part: feature:431887-432255:1:exon

WP_041530865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431887-432255:1:exon

PERMA_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02400
old locus tag: PERMA_0481
so part of: sequence
location: 432292..434490
location: region:432292-434490:1
so has part: feature:432292-434490:1:exon
subclass of: SO_0000010

position:432292:1
position: 432292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434490:1
position: 434490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432292-434490:1:exon

PERMA_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02400
old locus tag: PERMA_0481
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGNIYTTHTDELNKINPSLNAKPLNEFNIDELTSEDIVIFFDSIYSDFISNRIINKEVQKIEEPEDIVTVELPFMINFGDENNPMFFFSTENLEDLKEERLFLLNDVFHIILDFVLYDLLEEIERIKMSQELSELAEAELTLRSAIQKKDIIRIIDRHHFGTIFLATFNIDMGNKIYMFLFRGKISWNRKDNNGFKPFIIRYEETIIEKIKEAINTGKLNLKEQNINDAKPDGTTIDFNVEDTKLSIYEVKDLSKKTAIILLDINNNVKKIIFPKELKINNEVLYGFELDVEDFNNENKFFVELNKKDKNILLDIYKNLKNKYIEIKNDDGNTIKEINLGSMFLENLQKSLLYEFNKEHRLFNKLIKLNGKINYSFYEKIMEIIKNSLTKNYINQNPELLSKLFDILLQRGNKLPHIEIIFTTRDILKKYNRNEENIPGFLKRLGNYYVIKIIQKLFEEKKKTNKGTNKKSQPYDANRHYNISENTDEEYEDIDEDKKYLSREAINTLIKQPTLIDNKRGRKENKLNKLLLLTFYLADGLIYYRNKHAPKCKLSAVYGYIMEHNSEGKKYRYNSAKEIKGTYNWDAGIFSIIEFVGKNDNEYCVYRELIDFLNKSYSNEEKEISGIIFKAAETLDKLTKEVVAELVSKKKREDCTDELKNRILKELYPQILIFLNDNLNLYILSKECHNHEIKEYFENPFVPATKINGLYNRYKQGIKRLFEEARNVAISNK
SIO_010081: PERMA_RS02400
subclass of: SO_0000673
so part of: PERMA_RS02400
location: 432292..434490
location: region:432292-434490:1
so has part: feature:432292-434490:1:exon

WP_012676289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432292-434490:1:exon

PERMA_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02405
so part of: sequence
location: 434550..434981
location: region:434550-434981:1
so has part: feature:434550-434981:1:exon
subclass of: SO_0000010

position:434550:1
position: 434550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434981:1
position: 434981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434550-434981:1:exon

PERMA_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTNPEFERNMNNLFNEIEKDFKLREIAKKIAHIKPQKEFDEISNGHVYMISQEEFEKLDNLIYEIMAMSTSLPDHLNNIIKLWELNNVDVKALIYLSFFSGKYMGITIGKDIGKLESMNLLKTEFPNFLKEVLYKNSKDYRK
SIO_010081: PERMA_RS02405
subclass of: SO_0000673
so part of: PERMA_RS02405
location: 434550..434981
location: region:434550-434981:1
so has part: feature:434550-434981:1:exon

WP_041530866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434550-434981:1:exon

PERMA_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02410
old locus tag: PERMA_0483
so part of: sequence
location: 435281..438094
location: region:435281-438094:1
so has part: feature:435281-438094:1:exon
subclass of: SO_0000010

position:435281:1
position: 435281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438094:1
position: 438094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435281-438094:1:exon

PERMA_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02410
old locus tag: PERMA_0483
inference: COORDINATES: protein motif:HMM:NF024180.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MNPKIEALINQLEELKNKSDSEACKNLFGTVIEVLKNEPTNDEILEELLSYFWKEGDKINQICPDYYTSFLKILGNLSELFSDDKLKYFHLGVSWYRSGKIHKEKGNLDDAMNCFKNAIRYYENTVNIDSNLANAWYNLGLSWAKSGKIHKEKGNLDDAMNCFKNAIRYYENTVKINPNFADAWYNLGLSWARSGEIHKEKGNLDDAMNCFKNAIRYCKNAVKINPNLANAWSNLGFSWAKSGEIRKEKGNLDDAMNCFKNAIRYCENAVKINPNLANAWYNLGVSWQKLGEIHKEKGNIFDNSIRCLENAVKINPNFADAWYNLGVSWARSGEIHKEKGNLDDAMNCFKNAIRYCENAVNIDPNLANAWSDLGILWRMLIKIIPIKPLLNTAISYELTILFNLKRIIDGLNSKLLIESYINKFVFSSLDRLLFYSSLHKNSLTEKKEILEAVEQFKGYFFFKEFVGKQQITDNTNLNKLLKLHEKFNVNKTIENALHSLKNAMQKDNSIDTNLLRYIILESEAENSTNNKEKTREIEQIFYDTLKNISVNFNFDNLNLKTNETIVYLLFREIAIYRDIKRVLTIILVYKNGGEIKVNTKNYDIGGTNIDDYAEISYLLNAKLILPLASNKNLDDNLLKDIKNKIERSLIRDETKNYILDFIESNSLKEFLLIRRKLFADVIDILKRHVLPLIPKDKTRVYISPIGELNRLPVHIALIDEKEVSYLPTAKLLEKRIQLTFSKKALIVFTEEKQLKDEAVEVEKILKEDGYFVEMLNLSQYSNRKEILKKKLEEKDWNIVHFVLHGKYDEDTNMSYLILSPTENLTREDIYLMNLNINLVSLSSCETYTNKKVEGFDEINAIEKAFLVNNVQRVISTYYAVFSKGAKEFSTSYFKQLIKENHNFEKAFRNTVLELKQKGEDEYMFFRYTSKGQDTIVI
SIO_010081: PERMA_RS02410
subclass of: SO_0000673
so part of: PERMA_RS02410
location: 435281..438094
location: region:435281-438094:1
so has part: feature:435281-438094:1:exon

WP_015898914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435281-438094:1:exon

PERMA_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02415
old locus tag: PERMA_0484
so part of: sequence
location: complement(438164..438448)
location: region:438164-438448:-1
so has part: feature:438164-438448:-1:exon
subclass of: SO_0000010

position:438164:-1
position: 438164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438448:-1
position: 438448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438164-438448:-1:exon

PERMA_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02415
old locus tag: PERMA_0484
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNLKVVVIEKQGKVTIVKCGYCRGGGSAGWGKCSVCGGVGVITLVCEEPETPIVKCGYCGGGGSAGWGKCSVCGGVGAVPAFGKYKIRRAVRTG
SIO_010081: PERMA_RS02415
subclass of: SO_0000673
so part of: PERMA_RS02415
location: complement(438164..438448)
location: region:438164-438448:-1
so has part: feature:438164-438448:-1:exon

WP_012675913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438164-438448:-1:exon

PERMA_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02420
so part of: sequence
location: complement(438454..438654)
location: region:438454-438654:-1
so has part: feature:438454-438654:-1:exon
subclass of: SO_0000010

position:438454:-1
position: 438454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438654:-1
position: 438654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438454-438654:-1:exon

PERMA_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMKESKPAKKQTGLALLEGILEWKSQLSLRMKDNLRKNRCKESTKSYVGESIAIEDILSWHFMIRR
SIO_010081: PERMA_RS02420
subclass of: SO_0000673
so part of: PERMA_RS02420
location: complement(438454..438654)
location: region:438454-438654:-1
so has part: feature:438454-438654:-1:exon

WP_041530867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438454-438654:-1:exon

PERMA_RS10450
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10450
so part of: sequence
location: complement(438672..439094)
location: region:438672-439094:-1
so has part: feature:438672-439094:-1:exon
subclass of: SO_0000010

position:438672:-1
position: 438672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439094:-1
position: 439094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438672-439094:-1:exon

PERMA_RS10450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10450
inference: COORDINATES: protein motif:HMM:NF012514.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX hydrolase
translation: MELVNICKGIILNNSDIVLVRREDSNRYNGYLELPGGKKREYESLEECLIREINEETGINNINKVNQFCSFCFKDTKLNRHYILNLFICEIQKDKIQIKNKNAQWFSIEDLSNLKLTPYTEEILPFVFHVVRNRDLFLTK
SIO_010081: PERMA_RS10450
subclass of: SO_0000673
so part of: PERMA_RS10450
location: complement(438672..439094)
location: region:438672-439094:-1
so has part: feature:438672-439094:-1:exon

WP_049756061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438672-439094:-1:exon

PERMA_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02430
old locus tag: PERMA_0485
so part of: sequence
location: complement(439573..440193)
location: region:439573-440193:-1
so has part: feature:439573-440193:-1:exon
subclass of: SO_0000010

position:439573:-1
position: 439573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440193:-1
position: 440193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439573-440193:-1:exon

PERMA_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02430
old locus tag: PERMA_0485
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKFKNFFLVPVMFFLIFSQPYAYESRVSLSAGIFYPNSEDLDGWDEGTDITVSLSKRVSQSFYLHFDLSGHSTQAELYDTGLTGSGEIQTRGIEVIGIFSHQNNKLELYAGIGLGIYMNKLSLTATDGYYEYTYEDAGRGTGGVLKAGMRYSISPKAFIGTFIKFFTNNQDFQFYEIDSYGNVTKYEETFDFGGTVVNVEFGLTF
SIO_010081: PERMA_RS02430
subclass of: SO_0000673
so part of: PERMA_RS02430
location: complement(439573..440193)
location: region:439573-440193:-1
so has part: feature:439573-440193:-1:exon

WP_012676265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439573-440193:-1:exon

PERMA_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02435
old locus tag: PERMA_0486
so part of: sequence
location: complement(440318..440896)
location: region:440318-440896:-1
so has part: feature:440318-440896:-1:exon
subclass of: SO_0000010

position:440318:-1
position: 440318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440896:-1
position: 440896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440318-440896:-1:exon

PERMA_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02435
old locus tag: PERMA_0486
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKFIFFMTFIMGLTLIYGVSAAAEKKYAVSLFGGTFKPTGDLKDWDGSGVFGISILRKITDSYGIMIDASGYSVEYDSSSYYGKIDTTALEALFTVTFGSSVYVYAAGGVGYYVNSLDEEVKFLSISNSSTGSALGYVAKFGVRSDSKGGFFGLFVKYNTNDQEVYDYINGRYYKANFGGTSYGLELGIHF
SIO_010081: PERMA_RS02435
subclass of: SO_0000673
so part of: PERMA_RS02435
location: complement(440318..440896)
location: region:440318-440896:-1
so has part: feature:440318-440896:-1:exon

WP_012675695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440318-440896:-1:exon

PERMA_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02440
old locus tag: PERMA_0487
so part of: sequence
location: complement(440918..441655)
location: region:440918-441655:-1
so has part: feature:440918-441655:-1:exon
subclass of: SO_0000010

position:440918:-1
position: 440918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441655:-1
position: 441655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440918-441655:-1:exon

PERMA_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02440
old locus tag: PERMA_0487
inference: COORDINATES: protein motif:HMM:NF014670.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: creatininase family protein
translation: MLLENLSYVEVEAYLVEKDIILIPIGSVEQHSPYGLIGTDFITAEAIAREVGRRMDILVAPTITYGMSQHHSAFKGTVTLSPVTLINLVKDIINSLLNQGFRRIIFINGHGGNINAVKTAFEQLKYENKPGIYEIISWFLLPEIQEMERDIFEDKNGFHATPSEVSVTKFLRPEAFETKPKEKKKIEKPDGYFPLSGEEFKKLYPDGRMESAPWLAKEKYGKLIMEEAVRIIIERVKEIAKKKLF
SIO_010081: PERMA_RS02440
subclass of: SO_0000673
so part of: PERMA_RS02440
location: complement(440918..441655)
location: region:440918-441655:-1
so has part: feature:440918-441655:-1:exon

WP_012676560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440918-441655:-1:exon

PERMA_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02445
old locus tag: PERMA_0488
so part of: sequence
location: complement(441659..441964)
location: region:441659-441964:-1
so has part: feature:441659-441964:-1:exon
subclass of: SO_0000010

position:441659:-1
position: 441659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441964:-1
position: 441964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441659-441964:-1:exon

PERMA_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02445
old locus tag: PERMA_0488
inference: COORDINATES: protein motif:HMM:NF024245.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-hairpin-helix domain-containing protein
translation: MKINLKVLNVQMVSITLIVFSVLLFKFIENNIYTEPKIKKEDFQIDINTATMEELIKVPYIGEKTAEKILKLREEKGYFKSVSELKSLRNYRRFKNYLKVE
SIO_010081: PERMA_RS02445
subclass of: SO_0000673
so part of: PERMA_RS02445
location: complement(441659..441964)
location: region:441659-441964:-1
so has part: feature:441659-441964:-1:exon

WP_012676440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441659-441964:-1:exon

PERMA_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02450
old locus tag: PERMA_0489
so part of: sequence
location: complement(441961..443118)
location: region:441961-443118:-1
so has part: feature:441961-443118:-1:exon
subclass of: SO_0000010

position:441961:-1
position: 441961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443118:-1
position: 443118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441961-443118:-1:exon

PERMA_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02450
old locus tag: PERMA_0489
inference: COORDINATES: protein motif:HMM:NF020933.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA double-strand break repair nuclease NurA
translation: MRAELLGKTYRLKNEISSLALSLNSEVTEKEVRSKWNTYTPKPTYRYTVAEDGSFNKRHYLGFYLYSVCGYAVGYREDGEFVEEVTGDINLSVIKRSDLVDDYFRMLMFLSELKAVLRLSEKEKPSVIILDGTLSSRFITFFPKTDWFSNEDFEGKIAQISGEFIPEIKDNLMKEDITSFSEQIKQKVSERLEEILGEKGRRRDVLEAAFSKLAYFEYLLLLHRLFYGLDWNPVVIGVAKTSHLTEIFNRSMPDIRIFHQFIKETGYSEPVYVDLEQKKWEFSEVFEYLEKDIAVELKDISIKYFYGKYDRGRTISLIEVYENPQLTEDVTPERILDILNYYSVIGYPFLLKKADNEVRITNKDMDLIENLLDLKREIHGREGLK
SIO_010081: PERMA_RS02450
subclass of: SO_0000673
so part of: PERMA_RS02450
location: complement(441961..443118)
location: region:441961-443118:-1
so has part: feature:441961-443118:-1:exon

WP_012675388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:441961-443118:-1:exon

PERMA_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: obgE
locus tag: PERMA_RS02455
old locus tag: PERMA_0490
so part of: sequence
location: complement(443139..444161)
location: region:443139-444161:-1
so has part: feature:443139-444161:-1:exon
subclass of: SO_0000010

position:443139:-1
position: 443139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444161:-1
position: 444161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443139-444161:-1:exon

PERMA_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: obgE
locus tag: PERMA_RS02455
old locus tag: PERMA_0490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676423.1
GO function: GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase ObgE
translation: MRFIDKAKIHVKAGDGGNGCVAFRREKYVRMGGPSGGNGGKGGDVIIMADKSLKTLMDFRYKKHFKAENGQHGSGNNRHGRNGKDLIIKVPVGTVVKDAETGEILADLIYDGQKVVVAKGGRGGRGNAAFKTSTNQAPDYAEEGQPGEERWIELELKLIADIGIIGFPNAGKSTLISVLSKAKPKIADYPFTTLTPVLGVLQLDYGKSVVIADIPGLIEGASKGAGLGHEFLRHIERTKALIHMIDISDQRERDPIEAFEIINKELEKYSPELVKKPQIVVGNKIDMLSDRSLIEKLKKEFSKRGYPFVAVSLVTKEGLDQLIKLIAEVYEKISEKELIK
SIO_010081: PERMA_RS02455
subclass of: SO_0000673
so part of: PERMA_RS02455
location: complement(443139..444161)
location: region:443139-444161:-1
so has part: feature:443139-444161:-1:exon

WP_012676423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443139-444161:-1:exon

PERMA_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02460
old locus tag: PERMA_0491
so part of: sequence
location: complement(444217..446163)
location: region:444217-446163:-1
so has part: feature:444217-446163:-1:exon
subclass of: SO_0000010

position:444217:-1
position: 444217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446163:-1
position: 446163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444217-446163:-1:exon

PERMA_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02460
old locus tag: PERMA_0491
inference: COORDINATES: protein motif:HMM:NF014044.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF87 domain-containing protein
translation: MRILQKEEILPLLIKLVSEAKDYILISSPWIKYEILEKLLNRKDIKIKAVIRNSELEDLVITDRRVFDLLKKTGGQLYLNDKLHSKFVVVDGEKAVIGSSNLTVSGLLEDGNIETAVFLSDKEQIRKLEEQFDQIVKKSVNIFGEIAGVVLNSVNSINCEILLFESLPQQTYIKIPSDSGFLLGRIATVKNLSSTVFNTFLNFLSPSLLSDRDKLRLILSEKDREWRNAALLSYLNERNPEITVATVEILTEFNPKRIEKGESILKTPLKPPESGCPVFRLKDEKEIEDILMINHAGYRMSEPVNFGKLYNTQLKAYIDLEKIYTMHMAVLGTTGSGKTTFVKRILENIDPEGKKIFIFDLYGEYTDFLPSDKTEVITLPNILFPINVENIRDILREYGIPLQERSLDERRVSSFFRVYLKPDIDFIGYREKSLEDLLLESSEVLSPGSPLREEILTVIDMLKDDYGMDALSLQPEIITDIKNSVHSKKNFTVYNFQNIEDPRSRTNIAGITLKYIYKNARNTRDKSLVILEEAQNFAPEKGYGEIQAGMTNLSYLMTRKIATEGRKFNLGLIAITQRPANISKYVLSQLNTQAVFKLINRNDLEAVSVFFEYSKEDIFSLLPFLKPGTGFITGLGVPFGIVTEIRLG
SIO_010081: PERMA_RS02460
subclass of: SO_0000673
so part of: PERMA_RS02460
location: complement(444217..446163)
location: region:444217-446163:-1
so has part: feature:444217-446163:-1:exon

WP_012675686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444217-446163:-1:exon

PERMA_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rpmB
locus tag: PERMA_RS02465
old locus tag: PERMA_0492
so part of: sequence
location: complement(446247..446441)
location: region:446247-446441:-1
so has part: feature:446247-446441:-1:exon
subclass of: SO_0000010

position:446247:-1
position: 446247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446441:-1
position: 446441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446247-446441:-1:exon

PERMA_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rpmB
locus tag: PERMA_RS02465
old locus tag: PERMA_0492
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676453.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L28
translation: MAVCQICGKKTAHGNRVAHSATTTKRTWKPNLQKVKAVLPDGTTKKIYVCAKCLKAGKVRKAVR
SIO_010081: PERMA_RS02465
subclass of: SO_0000673
so part of: PERMA_RS02465
location: complement(446247..446441)
location: region:446247-446441:-1
so has part: feature:446247-446441:-1:exon

WP_012676453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446247-446441:-1:exon

PERMA_RS10455
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10455
old locus tag: PERMA_0493
so part of: sequence
location: 446578..447480
location: region:446578-447480:1
so has part: feature:446578-447480:1:exon
subclass of: SO_0000010

position:446578:1
position: 446578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447480:1
position: 447480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446578-447480:1:exon

PERMA_RS10455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10455
old locus tag: PERMA_0493
inference: COORDINATES: protein motif:HMM:TIGR00254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GGDEF domain-containing protein
translation: MLFKVKDYMSKDPVTVSPECSFKEIVDIMKTKKIGSVLVVDADRRLKDIVTQSDLIMHLLHGNLEAKVKNFIRDKKLITIDENSHVFDAVSYFEKYRIKHLPVLDGDSRLVGIITATDILKKVAGIGLMDPLTGLNNRNYYELLKQKYYCKLLSISVIMADLDDFKKINDRYGHLVGDEVLKKVGSIFKTNLRIYDEIIRWGGEEFLILLPRTNIKRAVMIAGRLKEKISAIRFKDYLDLKISISMGISHYEGEGRFLDTAVREADKALLTAKKEGKNRIVTGKNILNVMEKSEKLAIER
SIO_010081: PERMA_RS10455
subclass of: SO_0000673
so part of: PERMA_RS10455
location: 446578..447480
location: region:446578-447480:1
so has part: feature:446578-447480:1:exon

WP_012675406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:446578-447480:1:exon

PERMA_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rimO
locus tag: PERMA_RS02475
old locus tag: PERMA_0494
so part of: sequence
location: 447526..448824
location: region:447526-448824:1
so has part: feature:447526-448824:1:exon
subclass of: SO_0000010

position:447526:1
position: 447526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448824:1
position: 448824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447526-448824:1:exon

PERMA_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rimO
locus tag: PERMA_RS02475
old locus tag: PERMA_0494
EC number: 2.8.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012962950.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO process: GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S12 methylthiotransferase RimO
translation: MKIGVISLGCPKNLVDTELILGRLKTDKVQIVSDLNDAEVILVNTCGFIDEAKEESVNTILEVARLKENGNKKIVVTGCLVERYKKELEKEIPEVDMFIDLKEELLIPEKLGIKVDNFSSPYQKRLLTTPKHTAYLKISEGCDHTCGFCAIPSIRGKHRSRTIEDIVEEAKRLADLGVKELNIVSQDTSYYGTDIYGKPMLWELISRLEKIEGVRWIRLYYLYPTTVTEDFIKRMADSEKVVKYFEMPIQHTEDRILKDMMRGYRKSRIEKILEWKDRYIPEAAVRSAVIVGFPTETERDFESMKDFIKQAKFDWLGVFKYSHEEGTPAYTKYRDSIPEEEKIRRKNEITQLQEGITEEKNRDLIGKEIEVIVDGFSEEWETLPVGRTYRSAFEIDGIVYIETERPVKVGDFAKLKIKDLADSYDLVGEICE
SIO_010081: PERMA_RS02475
subclass of: SO_0000673
so part of: PERMA_RS02475
location: 447526..448824
location: region:447526-448824:1
so has part: feature:447526-448824:1:exon

WP_012676670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447526-448824:1:exon

PERMA_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: mtnA
locus tag: PERMA_RS02480
old locus tag: PERMA_0495
so part of: sequence
location: 448897..449958
location: region:448897-449958:1
so has part: feature:448897-449958:1:exon
subclass of: SO_0000010

position:448897:1
position: 448897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449958:1
position: 449958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448897-449958:1:exon

PERMA_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: mtnA
locus tag: PERMA_RS02480
old locus tag: PERMA_0495
EC number: 5.3.1.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675965.1
GO function: GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO process: GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: S-methyl-5-thioribose-1-phosphate isomerase
translation: MRKIKDIRPIQLKDHKLYVINQLKLPKEKEWLELSTYQQVAEAIEKMIIRGAPLIGIVGAYGFAIGVKQILDEGRSLDDVRDVFDRLKNTRPTAVNLFWALERVWKKFERWTEEGRSGEELVNLLFKEAERIDLEDYHANKAIGGYGQVLLPERCNVLTHCNTGALATSGWGTALGVIRSAFENGKDITVYVDETRPYLQGSRLTAWELVEEGIPHYLITDNSAGFLMSKGIIDAIIVGADRITANGDVANKIGTYTLAVLAEAHGIPFYVAAPTSTFDLDTDSGKDIPIEERSQLEVKKCGGCDIAPEETEALNYSFDVTPASKITAIITEKGIISHVDKEHITKFLRYRGV
SIO_010081: PERMA_RS02480
subclass of: SO_0000673
so part of: PERMA_RS02480
location: 448897..449958
location: region:448897-449958:1
so has part: feature:448897-449958:1:exon

WP_012675965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448897-449958:1:exon

PERMA_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02485
old locus tag: PERMA_0496
so part of: sequence
location: 449960..450931
location: region:449960-450931:1
so has part: feature:449960-450931:1:exon
subclass of: SO_0000010

position:449960:1
position: 449960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450931:1
position: 450931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449960-450931:1:exon

PERMA_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02485
old locus tag: PERMA_0496
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015419204.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YvcK family protein
translation: MRVVAVGGGTGLSSLLRGIKHLVPDTIRDLSAIVTVADNGGSSGRLREEMQVPAPGDIRNCIVALAEDEDILTQVFQYRFSNGNGLKGHSFGNLFLSVLTKITGDFLDAVEITSNILKIKGEIIPSTDKLVDIVAQFSDGAIIKGETQITEYGKQLKGKIVRIWMEPSDVEAPQKALEKIRDADFIILGPGSLYTSIIPNLLVKDIKEAILNSKAYKIYICNVMTQYGETYKFSASQHIKAIHETVGEEFIDAAIINTTLPPHELIEKYMRENSQPVTADVPEIVDMGITVYAKDLIEAGDYVRHNPEKLTAVLLEVMEKARV
SIO_010081: PERMA_RS02485
subclass of: SO_0000673
so part of: PERMA_RS02485
location: 449960..450931
location: region:449960-450931:1
so has part: feature:449960-450931:1:exon

WP_012675401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449960-450931:1:exon

PERMA_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: nadB
locus tag: PERMA_RS02490
old locus tag: PERMA_0497
so part of: sequence
location: 450932..452509
location: region:450932-452509:1
so has part: feature:450932-452509:1:exon
subclass of: SO_0000010

position:450932:1
position: 450932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452509:1
position: 452509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450932-452509:1:exon

PERMA_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: nadB
locus tag: PERMA_RS02490
old locus tag: PERMA_0497
EC number: 1.4.3.16
inference: COORDINATES: protein motif:HMM:TIGR00551.1
GO function: GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO process: GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-aspartate oxidase
translation: MRRYISNFNTADLSDEYVDTIIIGAGLAGLTTALQLKNLGIDPLIITRKETGISNSFLAQGGIAAAIGKDDDPQIHYEDTIKAGKGLCIERNVSVLVEEGLERVIDLIRYGVPFDRDEKGYLRLTQEGAHSRKRVLHVKDMTGKEIGKTVYSILSEKGIKIETGYFLEEILTDDNRFVGIIVSDRKNKKLIRGKSLVIATGGYSALYYRNTSAYNISGDTLGTAYRAGCILKDLEFVQFHPTAIYIEGEPAYLISEAVRGEGALLVDDREERFIDELKPRDEVARAIFKKYTEGRRVFLDISPLKKRGIDIKERFPTIFSMLKYYGYGDKTLIPVSPAAHYTIGGIEATSNGKTSVEGIFAVGESSCTGVHGANRLASNSLLECVVFGYKTAYSVFSYNMYADVNKNIKIKNKMRGEKILTKERKRFILNKIKKVMWEKVGLIRNKEVLKEALSQINSIEEEISDYSNTRYLTDLIYLSKAVILSALNREESRGTHYRSDYPDENPEFKKHTKVYDDFKIKLEVN
SIO_010081: PERMA_RS02490
subclass of: SO_0000673
so part of: PERMA_RS02490
location: 450932..452509
location: region:450932-452509:1
so has part: feature:450932-452509:1:exon

WP_012675729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450932-452509:1:exon

PERMA_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: infC
locus tag: PERMA_RS02495
old locus tag: PERMA_0498
so part of: sequence
location: 452512..453024
location: region:452512-453024:1
so has part: feature:452512-453024:1:exon
subclass of: SO_0000010

position:452512:1
position: 452512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453024:1
position: 453024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452512-453024:1:exon

PERMA_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: infC
locus tag: PERMA_RS02495
old locus tag: PERMA_0498
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459392.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-3
translation: MQELRVNEQIRVREVRLIDEKGQNLGIVPIDEALRIAEEKGLDLVEVSPNAKPPVCKIMDYGKYKFEQKKKEKEAKKKQRAKMQNVKEIKFRVKIEDHDYRTKVKHIREFIEDGDKVKVWIWFRGRENVHPEIGERLAHRIIEDLSDIAKVEKPPKKEGRNMIFTLVPKQ
SIO_010081: PERMA_RS02495
subclass of: SO_0000673
so part of: PERMA_RS02495
location: 452512..453024
location: region:452512-453024:1
so has part: feature:452512-453024:1:exon

WP_041530868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452512-453024:1:exon

PERMA_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02500
old locus tag: PERMA_0499
so part of: sequence
location: 453108..454280
location: region:453108-454280:1
so has part: feature:453108-454280:1:exon
subclass of: SO_0000010

position:453108:1
position: 453108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454280:1
position: 454280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453108-454280:1:exon

PERMA_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02500
old locus tag: PERMA_0499
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673430.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MKKVLVLGGGTAGVETAIFLKKEGFDVELVSDRDFFYIYPISIWIPTGEVGLDSISIPLKDLSESHGFKVTVDEVERISASDMKVYLKNSGERSDFDYLVIALGQSKIKHEGIEHTLSICGSPQEALKIRERIEDLIKIGKGKIAFGFGGNPRAKEAVRGGPVFEILFNTHNYLKKLGIRDNFELIFFAPMEKPGARLGEKALKMLDRMFNKMGIKRFTGKKIKRFTQNSVVFEDGSSVEADLILFTPGGTGHPVIKNSDLPQTEAGFIKIEDSCQVVGFENIYAAGDVVSIEGPEWKAKQGHLAEVMGRNIAHNIAVKEGIKSGEPKGYKEHINIFCLMDMGNGGGLAYRSENKALLIPLPVIGHYLKKGWGVYYKLSKLGKIPRIPGM
SIO_010081: PERMA_RS02500
subclass of: SO_0000673
so part of: PERMA_RS02500
location: 453108..454280
location: region:453108-454280:1
so has part: feature:453108-454280:1:exon

WP_012675888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453108-454280:1:exon

PERMA_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02505
old locus tag: PERMA_0500
so part of: sequence
location: complement(454281..454856)
location: region:454281-454856:-1
so has part: feature:454281-454856:-1:exon
subclass of: SO_0000010

position:454281:-1
position: 454281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454856:-1
position: 454856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454281-454856:-1:exon

PERMA_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02505
old locus tag: PERMA_0500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546416.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-alcohol phosphatidyltransferase family protein
translation: MSQIIKQIKPVFEEKISPVVDLLHRINISPNVVTFSGLLFIIAGSYFLFLQEYITAGFLILAGNLCDALDGALARKHKKITRFGAFIDSVVDRLSDFFPLMAIALIFSENTLFLSVTLLAIMFSYMVSYTRARAEGLGIDCKVGIFERAERSIVLIIAVFTGYLEIAVSIIAVGSAVTALQRVICFYKKSL
SIO_010081: PERMA_RS02505
subclass of: SO_0000673
so part of: PERMA_RS02505
location: complement(454281..454856)
location: region:454281-454856:-1
so has part: feature:454281-454856:-1:exon

WP_012675544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454281-454856:-1:exon

PERMA_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02510
old locus tag: PERMA_0501
so part of: sequence
location: complement(454858..455484)
location: region:454858-455484:-1
so has part: feature:454858-455484:-1:exon
subclass of: SO_0000010

position:454858:-1
position: 454858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455484:-1
position: 455484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454858-455484:-1:exon

PERMA_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02510
old locus tag: PERMA_0501
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546418.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylanthranilate isomerase
translation: MAVEFIKICGITQVEQALIVSELGATHIGVIFFEKSPRHIDIKRIREIRKSIQGKTRLVAVTVNPSEKIVEELLKTVDIVQFHGNETVEFLSKFPEDRVIKAFRIKSEKDINMMFPFFEKNYPVLIDTYKEGEYGGTGKQIDPDLARKVTQIYDRIILSGGLSPENLKRLIDHIKPYGVDASSKLEIKPGIKDLEKVERFIKIARMES
SIO_010081: PERMA_RS02510
subclass of: SO_0000673
so part of: PERMA_RS02510
location: complement(454858..455484)
location: region:454858-455484:-1
so has part: feature:454858-455484:-1:exon

WP_012675426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454858-455484:-1:exon

PERMA_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02515
old locus tag: PERMA_0502
so part of: sequence
location: complement(455475..456071)
location: region:455475-456071:-1
so has part: feature:455475-456071:-1:exon
subclass of: SO_0000010

position:455475:-1
position: 455475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456071:-1
position: 456071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455475-456071:-1:exon

PERMA_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02515
old locus tag: PERMA_0502
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRYIFLLVILILSSCAPLKKQITCEEKFYHILKKNSEEVRPFKISGTIFTGGVFFLFTGKFEKDKKISIFTPLGQKVVSVKYRTNREVCVLLKDKENCGIDTDILSEYIKTDIPFSLEDLLTGRFYIPEDSRYRCKKDHIIVNTGRYTIKFKGLKPEEVFYKNFSARYRYESGKIRSIFILKDDEEIIKIYIKSVRWL
SIO_010081: PERMA_RS02515
subclass of: SO_0000673
so part of: PERMA_RS02515
location: complement(455475..456071)
location: region:455475-456071:-1
so has part: feature:455475-456071:-1:exon

WP_012676267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455475-456071:-1:exon

PERMA_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02520
old locus tag: PERMA_0503
so part of: sequence
location: complement(456068..457747)
location: region:456068-457747:-1
so has part: feature:456068-457747:-1:exon
subclass of: SO_0000010

position:456068:-1
position: 456068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457747:-1
position: 457747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456068-457747:-1:exon

PERMA_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02520
old locus tag: PERMA_0503
inference: COORDINATES: protein motif:HMM:NF024821.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MKKLIFFMILIITASCSATQAQKEYDNPYFFYAACKYASKSGDALSAFQLCKKTIQLAPEAYSIYEETILLALHAKKKDEAVKILEDFVKRFPDKPETYSFATKIYKNLGNLDKAEEVALKGIERFPDNEAILSQLVDVYLKKNDAEKAKEVLFKIAKISPKKPRVYYTLARIYLFQNNKEEAIKHLKKALEIEPLYQPAYVLLGELYLQDRKFKEAEKVYLKVLEKDPNDLEALNRLFQVYVQADQFKKAEEIINRIVKIDPSNKDALLKKFLLYLRENKGEEIIRELEELAKEEPDNPTVLSILGMAYESAQRYKKAEEIYLKVLKLEPENSEILERLAEVYTRTGQYEKALDVLNRLYSLDPRDYRVLLIMADIENKRGNLDAALSYIQEAKSINDKDPTIYFFEGIYYEKLDQWDKAEEAFKKALELRPDFPDALNYYGYSLIIRNRDIDRAMDMIRKALELVPDSAAYLDSLGWGYFKKGEYLKALKYIKQAYQKAPDDPVVTEHLAEVEEALGNKEEALKLYRKALEIIEKTGDEGEPGLKKRILEKIKELER
SIO_010081: PERMA_RS02520
subclass of: SO_0000673
so part of: PERMA_RS02520
location: complement(456068..457747)
location: region:456068-457747:-1
so has part: feature:456068-457747:-1:exon

WP_012676779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456068-457747:-1:exon

PERMA_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02525
old locus tag: PERMA_0504
so part of: sequence
location: complement(457750..458637)
location: region:457750-458637:-1
so has part: feature:457750-458637:-1:exon
subclass of: SO_0000010

position:457750:-1
position: 457750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458637:-1
position: 458637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457750-458637:-1:exon

PERMA_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02525
old locus tag: PERMA_0504
inference: COORDINATES: protein motif:HMM:NF012791.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein
translation: MPFKKILVGIDFSEISDSIFDSALFLGKLYNADIHLIHVIEPISPLFQEEGFEPLIQTEEFQVVFEVESILKEEAKEKLERYILKGKAEGLNITSSVEIGNIAETILEISDEKEFDLIAIGSHKKGLLERVLLGSVAEKIVNKSKISTLVVKGASLTEINKILCGYDFLPNSIEALEVVKEIAKITKSEVYIVHADSDEWFAHLRHIYEKVFEKKLRLLEKIKEEISSELSVPVDIKIEKGKPEDVLLKSVEQIKPDLVVVGKRKGKDIKRFFLGTTAMRMVENSPVPVLIVRRR
SIO_010081: PERMA_RS02525
subclass of: SO_0000673
so part of: PERMA_RS02525
location: complement(457750..458637)
location: region:457750-458637:-1
so has part: feature:457750-458637:-1:exon

WP_012676165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457750-458637:-1:exon

PERMA_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: leuD
locus tag: PERMA_RS02530
old locus tag: PERMA_0505
so part of: sequence
location: complement(458643..459140)
location: region:458643-459140:-1
so has part: feature:458643-459140:-1:exon
subclass of: SO_0000010

position:458643:-1
position: 458643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459140:-1
position: 459140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458643-459140:-1:exon

PERMA_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: leuD
locus tag: PERMA_RS02530
old locus tag: PERMA_0505
EC number: 4.2.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012963332.1
GO component: GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO function: GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO process: GO:0009098 - leucine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-isopropylmalate dehydratase small subunit
translation: MVIEGKVWKFGDDINTDEIIPARYLITTDPKELAKHVMEDADPEFPNKVKPGDIIVAGKNFGCGSSREHAPLALKGAEIGAIIAESFARIFYRNAINLGLPIIESPEAARDAEEGDIIQIDMDKGIIRNVTKGKEYTFKPLPESLRKVFEAGGLMEYAKDKLKGE
SIO_010081: PERMA_RS02530
subclass of: SO_0000673
so part of: PERMA_RS02530
location: complement(458643..459140)
location: region:458643-459140:-1
so has part: feature:458643-459140:-1:exon

WP_012676497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458643-459140:-1:exon

PERMA_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02535
old locus tag: PERMA_0506
so part of: sequence
location: 459252..460268
location: region:459252-460268:1
so has part: feature:459252-460268:1:exon
subclass of: SO_0000010

position:459252:1
position: 459252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460268:1
position: 460268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459252-460268:1:exon

PERMA_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02535
old locus tag: PERMA_0506
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545542.1
GO function: GO:0051287 - NAD binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)-dependent oxidoreductase
translation: MKIYFFGIEDWEKLHIERKLKEAGIEGDIKFTKEPLSIDNVDLYKDADIISVFIYSKVTKEVIDRMENLRLIVTRSAGYDHIDVSYAKEKGIYVAYIPGYGNNTVAEYTFALILALSRKFKPMIDRTARGVFSREGLMGIDLLGKTIGIIGTGRIGCYVARLAHGFGMKILAYDRTKKKEIIEKYGVEYVGLEELLMRSDIVTIHLPYTKSTHYLINRFNIKLMKLNAMLINTSRGAVVEIDAVVEALKEGRLAGGVALDTFEAEEVLIEEEFLRRDDIPAIKLKKAMEAYYVLHEDNVIVSPHLAYYTKDASERILDIAVDEIKHFLTEGKPVNIAQ
SIO_010081: PERMA_RS02535
subclass of: SO_0000673
so part of: PERMA_RS02535
location: 459252..460268
location: region:459252-460268:1
so has part: feature:459252-460268:1:exon

WP_012675835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459252-460268:1:exon

PERMA_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: fabG
locus tag: PERMA_RS02540
old locus tag: PERMA_0507
so part of: sequence
location: 460339..461070
location: region:460339-461070:1
so has part: feature:460339-461070:1:exon
subclass of: SO_0000010

position:460339:1
position: 460339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461070:1
position: 461070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460339-461070:1:exon

PERMA_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: fabG
locus tag: PERMA_RS02540
old locus tag: PERMA_0507
EC number: 1.1.1.100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288605.1
GO function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoacyl-[acyl-carrier-protein] reductase
translation: MDFKGKLVLVTGSTRGIGKAIATAFAQKGADVIVTGRNKANAELVAQNISNEFGVNAYGVELDFSKDIKEQWKEIDKIGHVDILVNNAGLTRDTLFIRMKDEDWNEVINANLTGTFKVTQLAVKGMMKKRWGRIINISSIIGFIGNPGQVNYSTTKAGLIGFTKSLAKELASRNITVNAVAPGFIETDMTAELPAELKEKYLEQIPLGRFGKAEDVANTVLFLASDYASYITGETIHVNGGMY
SIO_010081: PERMA_RS02540
subclass of: SO_0000673
so part of: PERMA_RS02540
location: 460339..461070
location: region:460339-461070:1
so has part: feature:460339-461070:1:exon

WP_012676229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460339-461070:1:exon

PERMA_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: acpP
locus tag: PERMA_RS02545
old locus tag: PERMA_0508
so part of: sequence
location: 461109..461339
location: region:461109-461339:1
so has part: feature:461109-461339:1:exon
subclass of: SO_0000010

position:461109:1
position: 461109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461339:1
position: 461339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461109-461339:1:exon

PERMA_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: acpP
locus tag: PERMA_RS02545
old locus tag: PERMA_0508
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676282.1
GO function: GO:0000036 - acyl carrier activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl carrier protein
translation: MEERIKEIIADQLGIDVEQIKPESKFVDDLGADSLDVVELIMAFEEEFDVEIPDEDAEKIQTVGDVINYIKEKKGE
SIO_010081: PERMA_RS02545
subclass of: SO_0000673
so part of: PERMA_RS02545
location: 461109..461339
location: region:461109-461339:1
so has part: feature:461109-461339:1:exon

WP_012676282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461109-461339:1:exon

PERMA_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: fabF
locus tag: PERMA_RS02550
old locus tag: PERMA_0509
so part of: sequence
location: 461346..462590
location: region:461346-462590:1
so has part: feature:461346-462590:1:exon
subclass of: SO_0000010

position:461346:1
position: 461346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462590:1
position: 462590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461346-462590:1:exon

PERMA_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: fabF
locus tag: PERMA_RS02550
old locus tag: PERMA_0509
EC number: 2.3.1.179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007545511.1
GO function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase II
translation: MRRVVVTGIGAITPVGHNVKDTWEALINGKSGIDVIKRFDPFSYNLPVVIAGEIKDFDPKKYINPKDAKRMSDFVKFAMVAAKEAVADSGLDLNSIDLTRAGVIVGTGIGGLRDIEDQQTLLLEKGARRVSPFFIPSGISNMASGYISIEFGFKGPNTCVVTACATGTHAIGDAFKIIQRGDADIMIAGGTESAVTPLGIAGFANMKALSTRNDEPQKASRPFDAERDGFVMGEGAGVLILEELEHALKRGAKIYAEVVGYGMTGDAYHITAPCADADGAIRVMEMALNDARVNPDEVDYINAHGTSTPLNDKVETLAVKHVFKDHAYKLKLSSIKSMIGHLLGAAGAVEAVATVKTIETGIIPPTINLENPDPDCDLDYVPNKAVEYPVKIAVSNSFGFGGTNASLVFKAYEQ
SIO_010081: PERMA_RS02550
subclass of: SO_0000673
so part of: PERMA_RS02550
location: 461346..462590
location: region:461346-462590:1
so has part: feature:461346-462590:1:exon

WP_012675423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461346-462590:1:exon

PERMA_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rnc
locus tag: PERMA_RS02555
old locus tag: PERMA_0511
so part of: sequence
location: 462580..463329
location: region:462580-463329:1
so has part: feature:462580-463329:1:exon
subclass of: SO_0000010

position:462580:1
position: 462580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463329:1
position: 463329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462580-463329:1:exon

PERMA_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rnc
locus tag: PERMA_RS02555
old locus tag: PERMA_0511
EC number: 3.1.26.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674732.1
GO function: GO:0004525 - ribonuclease III activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease III
translation: MSSNLDREFLERIKKLEQKLGYVFKDKNLPLTALTHSSFAAEYHKEIKDYEVLEFLGDAVLSLIVSEILIKTFPEASEGELSQTRSAVISEAYLSRLARILGLNELVLLSRGEIAQKGMERESLLCDVFESVFGAVYVDCDYDIKIPREIFNRFFKDYLIESIKKGNIPRDYKSILQIMTQRLFGVVPKYSMVSAEGPEHEKIFTMECSVDNVVRTFGTGKSKKEAETEAAKKAYFYLKERYKDKKKRI
SIO_010081: PERMA_RS02555
subclass of: SO_0000673
so part of: PERMA_RS02555
location: 462580..463329
location: region:462580-463329:1
so has part: feature:462580-463329:1:exon

WP_012675533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462580-463329:1:exon

PERMA_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02560
old locus tag: PERMA_0510
so part of: sequence
location: complement(463326..464888)
location: region:463326-464888:-1
so has part: feature:463326-464888:-1:exon
subclass of: SO_0000010

position:463326:-1
position: 463326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464888:-1
position: 464888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463326-464888:-1:exon

PERMA_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02560
old locus tag: PERMA_0510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007547957.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 39 protein
translation: MNRDLAAALFVFISSFIIFSANIGGLSIYSLDEAKNAECAREMLERADLIVPTFNYQLRTDKPPLHYYFMMISYSIFGVNEFSARFFSSLFGAFTVLITFLISHRYLGYRVAFFSFIALISSLHFSIQFHMAVPDPFLIFWINAALFSFLIGFKEDKKLFIYLFYIFMGLGVLTKGPVAVVLPSGIILLYLLFTGNTSIKTLKKLRIPSGLIVTALVSLPWYIAVYIKTDGKWVYDFIFKHNIHRFSEPMEGHGGIFIVTLLFIFFGMLPFSVFIPQTLKLAWKNRKESIILLSLIIVGVYTIFFSISGTKLPNYTVPLYPALAILTGYFLDNIFRFSNRSLYISLSFYTIIGLILTAGLFIGIRNEPEISDLSYLSLYFLLLPLSGILAIFMLRKSRIIPVLTVSAFSVFLGFLFFYYLFPKIDKRNPVYQMMPLIEKDRDIRYYKNFNPAFVFYLKKEIKPLKKDEIQGFLHSDEKVYILTRKRYLNELKGIKDLVILKQVKDLFERKISVLITNRKD
SIO_010081: PERMA_RS02560
subclass of: SO_0000673
so part of: PERMA_RS02560
location: complement(463326..464888)
location: region:463326-464888:-1
so has part: feature:463326-464888:-1:exon

WP_012676490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463326-464888:-1:exon

PERMA_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02565
old locus tag: PERMA_0512
so part of: sequence
location: complement(464914..464997)
location: region:464914-464997:-1
so has part: feature:464914-464997:-1:exon
subclass of: SO_0000663

position:464914:-1
position: 464914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464997:-1
position: 464997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464914-464997:-1:exon

PERMA_RS02565
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 123214
locus tag: PERMA_RS02565
old locus tag: PERMA_0512
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(464961..464963),aa:Leu,seq:caa)
SIO_010081: PERMA_RS02565
subclass of: SO_0000673
so part of: PERMA_RS02565
location: complement(464914..464997)
location: region:464914-464997:-1
so has part: feature:464914-464997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464914-464997:-1:exon

PERMA_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02570
old locus tag: PERMA_0513
so part of: sequence
location: complement(465062..466432)
location: region:465062-466432:-1
so has part: feature:465062-466432:-1:exon
subclass of: SO_0000010

position:465062:-1
position: 465062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466432:-1
position: 466432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465062-466432:-1:exon

PERMA_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02570
old locus tag: PERMA_0513
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008288848.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-54 dependent transcriptional regulator
translation: MTKKVYILAKDKKVRDIFSRYLNGIVYLEDPKKISKISGVVFVNISDFGIVPVDVKKGLFPIAILDKSISKTNLAAFIMRIMSKNYFDYIEFPFSEKQLNSILEKINQKEENEKKLIYFRNRSAQDGVLCQYLCSIIGSSPQLREICKLAGEVAPTDLPVLITGETGTGKELLARGIWKLSKRSNKPFIAINCAAIPENLLESELFGYEKGAFTGAEKTKEGKFELADGGTIFLDEIGELPLSAQSKLLRVLQEGTFYRVGGNKEIKVDVRVMAATNRDLEDMVAKGKFREDLYYRLNLIHLHLPPLRERKEDIPYIVECIVNKYNQKLSKSIAGASKEYMEVLKDQRWEGNIRELENTVVRSMILCRDNILTVNDLTFLREKRVKPQIEDNFEEILKNRVLASLEEGSIEEIKEKIDKIIVQTALEYTKHNQVKASQLLGINRATLRKKIQKYGL
SIO_010081: PERMA_RS02570
subclass of: SO_0000673
so part of: PERMA_RS02570
location: complement(465062..466432)
location: region:465062-466432:-1
so has part: feature:465062-466432:-1:exon

WP_012676846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465062-466432:-1:exon

PERMA_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02575
old locus tag: PERMA_0514
so part of: sequence
location: complement(466500..466949)
location: region:466500-466949:-1
so has part: feature:466500-466949:-1:exon
subclass of: SO_0000010

position:466500:-1
position: 466500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466949:-1
position: 466949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466500-466949:-1:exon

PERMA_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02575
old locus tag: PERMA_0514
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLTLILTAALLLIIPSFAKDKLLVVFIYSDGSPAYQKIHNKILKDKYLSKRIKKSFDFREISLKDPQVDNFVNRYGIEKKEGVYFINPESGSLLYAVTDLSQPCRCANLINYFSRNLHKKGIDPDEYLIKAEKIGAYKVKVEDNYLF
SIO_010081: PERMA_RS02575
subclass of: SO_0000673
so part of: PERMA_RS02575
location: complement(466500..466949)
location: region:466500-466949:-1
so has part: feature:466500-466949:-1:exon

WP_012676036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466500-466949:-1:exon

PERMA_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02580
old locus tag: PERMA_0515
so part of: sequence
location: complement(467104..467541)
location: region:467104-467541:-1
so has part: feature:467104-467541:-1:exon
subclass of: SO_0000010

position:467104:-1
position: 467104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467541:-1
position: 467541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467104-467541:-1:exon

PERMA_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02580
old locus tag: PERMA_0515
inference: COORDINATES: protein motif:HMM:NF012876.2
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing protein
translation: MSLQNFLKKSVIHKILFITLSGAVVFSIASVIVYLIIFSNEQTYQLVEQLIAYAKAHPLNFAMLLGFITFQATLIPIVMTYFLVKTEIINPLNDIADRMEKISVGELDEEMKIDREDEIGNLQESFERMRVSLKVIIDKLESEQL
SIO_010081: PERMA_RS02580
subclass of: SO_0000673
so part of: PERMA_RS02580
location: complement(467104..467541)
location: region:467104-467541:-1
so has part: feature:467104-467541:-1:exon

WP_012676961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467104-467541:-1:exon

PERMA_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02585
old locus tag: PERMA_0516
so part of: sequence
location: complement(467559..467921)
location: region:467559-467921:-1
so has part: feature:467559-467921:-1:exon
subclass of: SO_0000010

position:467559:-1
position: 467559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467921:-1
position: 467921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467559-467921:-1:exon

PERMA_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02585
old locus tag: PERMA_0516
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIKSKKAIIGSLLIFSVAFSFPFQHQKEDITVPLNVEGSGSSDVVVEGCIGDCAACHSITPYEAKSILDVKFDVKKILNIDIKRGYFEIIYENSEGKKEKINLFFGKDKACREVILLDE
SIO_010081: PERMA_RS02585
subclass of: SO_0000673
so part of: PERMA_RS02585
location: complement(467559..467921)
location: region:467559-467921:-1
so has part: feature:467559-467921:-1:exon

WP_012676010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467559-467921:-1:exon

PERMA_RS10460
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10460
old locus tag: PERMA_0517
so part of: sequence
location: complement(467987..470275)
location: region:467987-470275:-1
so has part: feature:467987-470275:-1:exon
subclass of: SO_0000010

position:467987:-1
position: 467987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470275:-1
position: 470275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467987-470275:-1:exon

PERMA_RS10460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10460
old locus tag: PERMA_0517
inference: COORDINATES: protein motif:HMM:NF013259.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA family protein
translation: MIKNGIYRDYLKDIERFNQLYDQYKKGEAFESDFKAFRLNNGIYGQRQQEFHMVRIKIPAGVLTPDQIREIADIGDQFSNGVAHVTTRQDIQYHWIKLDDVPVIIQRINEAGLTTKDACGNTLRNITASYLSGVCPYEPFEVERIALKITELLIGRYEDLPRKFKIAFACCRKHSFLIPFNDLGFIPVVKDGKAGFEVYIGGGLGDRPKYAHKYTDFLPIEDLTIIISAVMDLFDRYGDRKNKRHNRLKFLIEKLGFERFLELLQDSIERARSVEESFSCDITINGTKTVERKLPYSEEPQFNFWLESNILPQRQEGLYTALVKLSLGNITTGKLRSLADIAEEYSLTVKATHDQNVALLNIPEEDLESVYTQLKLSALDAVGASSYLDITSCPGSETCSLGITAARELSRAIYDILPKDRETFEKIKDITIKVSGCPNSCAHHHVASIGFHGIAMKIGETLIPAYVLHLGGSGDIDGAKIGHTVLKIPAKNVPDVVKHLIDLYLNYGEGRPFERFVEEYGIDRIKEELSVYQELKEGIEYNKDWGSDKEFSLEDLGTGECAGIIADKVETALKEGERLIKQAESHISKGFKDDAYPHIEKAVQIIASGLLIPFGVKAEGKDAIDRFIEHIIGRKLIDERYISLLTGEIKDIDKLLEESKKFYQDAKRTYLKLRRDTEKKKEEKKEETARKEFLDLRGVECPFNYVKAKMKLKEMDTGSILVLTIDGEESIRSVPQSIRDDGHEIIDIQEENGYYTVVVRKR
SIO_010081: PERMA_RS10460
subclass of: SO_0000673
so part of: PERMA_RS10460
location: complement(467987..470275)
location: region:467987-470275:-1
so has part: feature:467987-470275:-1:exon

WP_012676704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467987-470275:-1:exon

PERMA_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02595
old locus tag: PERMA_0518
so part of: sequence
location: 470515..471522
location: region:470515-471522:1
so has part: feature:470515-471522:1:exon
subclass of: SO_0000010

position:470515:1
position: 470515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471522:1
position: 471522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470515-471522:1:exon

PERMA_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02595
old locus tag: PERMA_0518
inference: COORDINATES: protein motif:HMM:NF012800.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGRFFRTFFGSYKEESLTGSTKDILHKILEGKLSDVKTASFLVFLKYNGSPYIFGKAVDVLREKIEKIDLFLPDSIEIGYPYKLKKNSPYFLIPASVVLSLLPKSEIKAVFHGDNLGKGSTKDIFDHLGITVLTNEDSESMLKNLNIGFFNRSLFLPSLSDLNGLREELNIDDLFNYTEKFVNPVGSMYHITGAKESEIDFYIDLLKERYRRFGVVTGVDGYPDITGRSKLYIYSDGKLERYDLDIDNFELKGRFSPRDHSEFITELLSKRLKDYERYLFINGAVLLLVRGTVRSIEEGYKITEDLFHRYDYSQILRNIQRYSDYLNYKNIYEL
SIO_010081: PERMA_RS02595
subclass of: SO_0000673
so part of: PERMA_RS02595
location: 470515..471522
location: region:470515-471522:1
so has part: feature:470515-471522:1:exon

WP_012676263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470515-471522:1:exon

PERMA_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02600
old locus tag: PERMA_0519
so part of: sequence
location: 471535..472242
location: region:471535-472242:1
so has part: feature:471535-472242:1:exon
subclass of: SO_0000010

position:471535:1
position: 471535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472242:1
position: 472242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471535-472242:1:exon

PERMA_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02600
old locus tag: PERMA_0519
EC number: 1.8.4.8
inference: COORDINATES: protein motif:HMM:NF002537.0
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0004604 - phosphoadenylyl-sulfate reductase (thioredoxin) activity [Evidence IEA]
GO process: GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoadenylyl-sulfate reductase
translation: MFTKEFVKERSDHFENLPAQDLLKWVYQNFKNVGFTSSFSADDVSIIHMIKEIKPDALIIFIDTDYHFPETYELVKKIKEEWDINLKIIKPLITVEEQDRLYGEKLYEKDPDKCCQIRKVEPLKRVLEELDVWITGMRRDQSPTRANIGKVETHRLPSGKTILKVNPIADWTRKDVWKYVHENNLPYNPLYDQNYLSIGCAPCTRPVLEGEDERAGRWAGKGKLECGLHTFTEKE
SIO_010081: PERMA_RS02600
subclass of: SO_0000673
so part of: PERMA_RS02600
location: 471535..472242
location: region:471535-472242:1
so has part: feature:471535-472242:1:exon

WP_012675563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471535-472242:1:exon

PERMA_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02605
old locus tag: PERMA_0521
so part of: sequence
location: 472243..473007
location: region:472243-473007:1
so has part: feature:472243-473007:1:exon
subclass of: SO_0000010

position:472243:1
position: 472243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473007:1
position: 473007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472243-473007:1:exon

PERMA_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02605
old locus tag: PERMA_0521
inference: COORDINATES: protein motif:HMM:NF014035.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfite exporter TauE/SafE family protein
translation: MELVIAGVILGLIIGLTGIGGGMLTTPVLTIFMGVPISTAVGTSLLFSAITKIFASGIYIKRGLVCRKLTLLLASGSIPGAFLGSYAFHCFFDRYPAIAGKVIPAFIIFMILVSCTFSYYRMFSKSEKIANFDIRNRPFLIPVIGLVVGFDIGFTSVGAGVIVASILLALCPMNPSRIIGTDIVHGFILSVFAGGLHYSFGGVDTDVLFKLLQGGIFGVILGSLVSPYLPQKPFRFALNSAVLVFAIMFIKKVF
SIO_010081: PERMA_RS02605
subclass of: SO_0000673
so part of: PERMA_RS02605
location: 472243..473007
location: region:472243-473007:1
so has part: feature:472243-473007:1:exon

WP_012676858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472243-473007:1:exon

PERMA_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: rsmA
locus tag: PERMA_RS02610
old locus tag: PERMA_0520
so part of: sequence
location: complement(472960..473757)
location: region:472960-473757:-1
so has part: feature:472960-473757:-1:exon
subclass of: SO_0000010

position:472960:-1
position: 472960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473757:-1
position: 473757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472960-473757:-1:exon

PERMA_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: rsmA
locus tag: PERMA_RS02610
old locus tag: PERMA_0520
EC number: 2.1.1.182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675737.1
GO function: GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
translation: MGNFRPKKRFGQHLLISKGVIQKIVECLDIKEDDTVVEIGVGTGQLTEEILRRNPKIVYGIEIDKTVYPIIEERFKDFKNFVLIKEDFFDVDLRKLTDGKIKLTGNLPYNVASHILVNTAFYIDILQLAVFMIQKEVAQKLVGKPKTKDYTFMSVFLQTFFDIDYVMSVPARFFSPPPKVTSAVIRMIPKEKLPVSLDHMKKYKNFVSMLFSNRRKMLRSKIDKDILERAGIDPKARAEELSVDDFIRLFSEHLLYKHDGKNENS
SIO_010081: PERMA_RS02610
subclass of: SO_0000673
so part of: PERMA_RS02610
location: complement(472960..473757)
location: region:472960-473757:-1
so has part: feature:472960-473757:-1:exon

WP_012675737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472960-473757:-1:exon

PERMA_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: galU
locus tag: PERMA_RS02615
old locus tag: PERMA_0522
so part of: sequence
location: complement(473757..474635)
location: region:473757-474635:-1
so has part: feature:473757-474635:-1:exon
subclass of: SO_0000010

position:474635:-1
position: 474635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473757-474635:-1:exon

PERMA_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: galU
locus tag: PERMA_RS02615
old locus tag: PERMA_0522
EC number: 2.7.7.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459559.1
GO function: GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO process: GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UTP--glucose-1-phosphate uridylyltransferase GalU
translation: MLQVKKAVIPVAGFGTRFLPATKATPKEMMPIVDKPIIQYIVEEAVKSGIDTIIFVTGRHKRAIEDHFDYAPELEYTLEKSGKDEYVNIIREISDMANFVYIRQKEQLGLGHAILTAQHVIGNEPFAVLLGDELIINEEQPGIKQLIEVYQKFGKSVLGTTEVPKEETYKYGIVEGTEIEDGIKLVNYLVEKPEPEEAPSTSAIIGRYILTPNIFDALKRTPFGKGGELQLTDALMTLRKEEAVYAKDIEGIRHDTGNKLGYIKAIIDFALEREDTKDFIKQLIISKAKELQ
SIO_010081: PERMA_RS02615
subclass of: SO_0000673
so part of: PERMA_RS02615
location: complement(473757..474635)
location: region:473757-474635:-1
so has part: feature:473757-474635:-1:exon

WP_012676895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473757-474635:-1:exon

PERMA_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02620
old locus tag: PERMA_0523
so part of: sequence
location: complement(474639..475355)
location: region:474639-475355:-1
so has part: feature:474639-475355:-1:exon
subclass of: SO_0000010

position:474639:-1
position: 474639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475355:-1
position: 475355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474639-475355:-1:exon

PERMA_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02620
old locus tag: PERMA_0523
EC number: 6.3.2.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675760.1
GO function: GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO process: GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoribosylaminoimidazolesuccinocarboxamide synthase
translation: MEKREKLYEGKAKIIYATDEPDKVIAYYKDSATAFDAIKKATIEGKGVLNNKIASFFFQLLNEKGIPTHFIKQISDREMLIYKVDIIPVEVVVRNIAAGSIVKRLGIPEKKEFDPPLVEFYLKNDELHDPIICEQHIYAMDLAKPEEVQKMKELALKVNDVLREFMREQGIILVDFKLEFGRKDGQIILADEISPDTCRFWDAKTGEKLDKDRFRFDLGDLIEGYTKILEKIQKKEGE
SIO_010081: PERMA_RS02620
subclass of: SO_0000673
so part of: PERMA_RS02620
location: complement(474639..475355)
location: region:474639-475355:-1
so has part: feature:474639-475355:-1:exon

WP_012675760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474639-475355:-1:exon

PERMA_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02625
old locus tag: PERMA_0524
so part of: sequence
location: complement(475368..476042)
location: region:475368-476042:-1
so has part: feature:475368-476042:-1:exon
subclass of: SO_0000010

position:475368:-1
position: 475368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476042:-1
position: 476042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475368-476042:-1:exon

PERMA_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02625
old locus tag: PERMA_0524
inference: COORDINATES: protein motif:HMM:NF021492.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MKKRKVSLTPEQKKDIPVKEVPIKEDVDLEFEYKIYMLFDKLKKYKLFIIAGFVAFILLIIGFVYLKSEREKLLNEASGVVYDIRASYIDKKYDKADNLIKKFKERYSDTPYLKLVLAYELLIQKEKNNVSEDKIKEVEKHINSEQIRSGLKEFYAYTLHSKGKNKEALTVLDQIDQKYYNYISALLLKGFILKKEGKNPEDIFRQITELSKYNYFKKIAEENL
SIO_010081: PERMA_RS02625
subclass of: SO_0000673
so part of: PERMA_RS02625
location: complement(475368..476042)
location: region:475368-476042:-1
so has part: feature:475368-476042:-1:exon

WP_012675634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475368-476042:-1:exon

PERMA_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02630
old locus tag: PERMA_0525
so part of: sequence
location: complement(476087..477049)
location: region:476087-477049:-1
so has part: feature:476087-477049:-1:exon
subclass of: SO_0000010

position:476087:-1
position: 476087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477049:-1
position: 477049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476087-477049:-1:exon

PERMA_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02630
old locus tag: PERMA_0525
inference: COORDINATES: protein motif:HMM:NF013257.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 9 protein
translation: MKKVLLIRFSSLGDVILSTSVLRPLYEAGYTVDFLTFKPFDQIFKKDYRVKDVLSPEKRELKGLSILKFREKISDYDIIIDLHRNLRSSVLTYSKRTVRYRKNSIKRRLYIYPIFRKFIKDKFNVVTAYTETLERLGIRCSDCRPEVILTEEEKNKVKEYLPDKFIVIGTGARYKNKIYKNYDRVSEILIKKGFNVVLVGSSEDRKNDKNVYPEKVIDLRGKLSIRESLSVISIAFLTISNDSAVAHMSRAVGTPVSVVYGATHPYFGFAPLPDEGVYIIKGIPCQPCDLHGKKECKKGNTECLDIPPELIVEKSLSTVK
SIO_010081: PERMA_RS02630
subclass of: SO_0000673
so part of: PERMA_RS02630
location: complement(476087..477049)
location: region:476087-477049:-1
so has part: feature:476087-477049:-1:exon

WP_012676466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476087-477049:-1:exon

PERMA_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02635
old locus tag: PERMA_0526
so part of: sequence
location: complement(477046..477375)
location: region:477046-477375:-1
so has part: feature:477046-477375:-1:exon
subclass of: SO_0000010

position:477046:-1
position: 477046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477375:-1
position: 477375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477046-477375:-1:exon

PERMA_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02635
old locus tag: PERMA_0526
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MSDRIDMLKKALEKDPENPLGLYGLGMEYMKMGNFEDAIVYLKKYLSVYDDQGAGYRALAQCYVKLGDIEKAIEAYERGIEQAKKYKHASMEKEFSQEIEILKGKIGKN
SIO_010081: PERMA_RS02635
subclass of: SO_0000673
so part of: PERMA_RS02635
location: complement(477046..477375)
location: region:477046-477375:-1
so has part: feature:477046-477375:-1:exon

WP_012676470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477046-477375:-1:exon

PERMA_RS02640
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02640
old locus tag: PERMA_0527
so part of: sequence
location: 477505..477999
location: region:477505-477999:1
so has part: feature:477505-477999:1:exon
subclass of: SO_0000010

position:477505:1
position: 477505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477999:1
position: 477999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477505-477999:1:exon

PERMA_RS02640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02640
old locus tag: PERMA_0527
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYISAYLTVLFLFFTAFSYEDFVQYERGYYYVIIKQGSFKAINGELKSQIMDHGWDIVHTINVDKTVKSKKPYKTHLLCKASYLKKGVKLFDPIGVIIPCKMAIKVEGSYVKIMVEDVSEYSKIYAPGNEQFSKFLDKVRKEMIDILNKTASKFMKSKYTPYE
SIO_010081: PERMA_RS02640
subclass of: SO_0000673
so part of: PERMA_RS02640
location: 477505..477999
location: region:477505-477999:1
so has part: feature:477505-477999:1:exon

WP_012675626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477505-477999:1:exon

PERMA_RS02645
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02645
old locus tag: PERMA_0528
so part of: sequence
location: complement(478024..479046)
location: region:478024-479046:-1
so has part: feature:478024-479046:-1:exon
subclass of: SO_0000010

position:478024:-1
position: 478024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479046:-1
position: 479046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478024-479046:-1:exon

PERMA_RS02645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02645
old locus tag: PERMA_0528
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459328.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-dependent enzyme
translation: MAKKRPIALLSELASHKETFGGDMPIAPGHRMCIGCGIPPIVNEILLAINKPVIVSNATGCLEVTTGVYPVTAWNVPWIHVNFQSAATVITGVESAYKVLKKKGVLPEDLDIEFVAFGGDGGTYDIGFQSLSASVERGHNFLYVCYNNEGYQNTGYQKSSATPIGAYTKTTPVGKERVGKQEPRKDLTMIMAAHGIPYVAQASPHIFRDLTRKTKKAMTFKGPKFINVLEPCTLSWRFSPDDTMRLAKLAVETRYWPVYEVIHGKYWKVNIKPKRPKPIEEYIAAQPRWKHVLKYPEVLERIQKEIDEKWNLLLHLEEMSKKLAEDEGIDYEELFKVPED
SIO_010081: PERMA_RS02645
subclass of: SO_0000673
so part of: PERMA_RS02645
location: complement(478024..479046)
location: region:478024-479046:-1
so has part: feature:478024-479046:-1:exon

WP_012675753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:478024-479046:-1:exon

PERMA_RS02650
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: porA
locus tag: PERMA_RS02650
old locus tag: PERMA_0529
so part of: sequence
location: complement(479049..480242)
location: region:479049-480242:-1
so has part: feature:479049-480242:-1:exon
subclass of: SO_0000010

position:479049:-1
position: 479049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480242:-1
position: 480242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479049-480242:-1:exon

PERMA_RS02650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: porA
locus tag: PERMA_RS02650
old locus tag: PERMA_0529
EC number: 1.2.7.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459329.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
translation: MAQTKVVALTGNQAAAEAMRQINFDIAAVYPISPQTELMGFFAEYVANGEVDTEMIAVDGEHSAMATCIGAAAAGARTITASAGPGIAYMVENLYVASGMRVPIVLLDVNRALSAPLSIHCDHADSMLTRDTGWISIFCENAQEAYHSIIMSVKISEKAMFPIIVNYDGYIVSHSIEDVEILDDETVRNFVGPSDIHRIPHPLLDIKNPVTYGATAQPDYYTECKYQQHVDFLKVYDVVREVFEEFGQIVGRKYDFIEEYKTEDAEYIGISMGSSFGTLKDTVDTLREQGKKVGAIKIRLYRPFPVKEIAKALSNAKGVAVLDRADSFDGIGGPLFKDVASALLGTTNRPFVHNFIYGLGGREVLEEDFIKAFNRLERLEKGIETRENFVEYLQVRE
SIO_010081: PERMA_RS02650
subclass of: SO_0000673
so part of: PERMA_RS02650
location: complement(479049..480242)
location: region:479049-480242:-1
so has part: feature:479049-480242:-1:exon

WP_012675469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479049-480242:-1:exon

PERMA_RS02655
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02655
old locus tag: PERMA_0530
so part of: sequence
location: complement(480262..480579)
location: region:480262-480579:-1
so has part: feature:480262-480579:-1:exon
subclass of: SO_0000010

position:480262:-1
position: 480262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480579:-1
position: 480579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480262-480579:-1:exon

PERMA_RS02655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02655
old locus tag: PERMA_0530
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459330.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 4Fe-4S binding protein
translation: MSYELKPWHEIPIGSIVTEAGSSKINHTGSWRMLRPVLHTDKCTHCLICWIFCPDDSIPVTPQERFETDFEYCKGCGICATECPYDALEMVPEMEIKLKELEELG
SIO_010081: PERMA_RS02655
subclass of: SO_0000673
so part of: PERMA_RS02655
location: complement(480262..480579)
location: region:480262-480579:-1
so has part: feature:480262-480579:-1:exon

WP_012676028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480262-480579:-1:exon

PERMA_RS02660
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02660
old locus tag: PERMA_0531
so part of: sequence
location: complement(480658..481257)
location: region:480658-481257:-1
so has part: feature:480658-481257:-1:exon
subclass of: SO_0000010

position:480658:-1
position: 480658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481257:-1
position: 481257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480658-481257:-1:exon

PERMA_RS02660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02660
old locus tag: PERMA_0531
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459331.1
GO function: GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-oxoacid:acceptor oxidoreductase family protein
translation: MATATDKAMREIRWHGRGGQGTVTAAKMLASAAIIRGKHGQAMPEFGLERSGTPVKVSTRISDHIINTRAPVEHPEIVIITDPSLMFTIKDIIKAGTDENTVFIVNTNFPPDKVRKILDIPKNELWIVDASKIALEEFGRNIPNTAVLGAVAKATGIVDLDALKQEIEEAFSASSKLRALIPQNLKALERGYNEVYKAD
SIO_010081: PERMA_RS02660
subclass of: SO_0000673
so part of: PERMA_RS02660
location: complement(480658..481257)
location: region:480658-481257:-1
so has part: feature:480658-481257:-1:exon

WP_012675292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480658-481257:-1:exon

PERMA_RS02665
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: recR
locus tag: PERMA_RS02665
old locus tag: PERMA_0532
so part of: sequence
location: complement(481329..481928)
location: region:481329-481928:-1
so has part: feature:481329-481928:-1:exon
subclass of: SO_0000010

position:481329:-1
position: 481329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481928:-1
position: 481928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481329-481928:-1:exon

PERMA_RS02665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: recR
locus tag: PERMA_RS02665
old locus tag: PERMA_0532
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674514.1
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination mediator RecR
translation: MDIIPSTLKEAVEKISELPGYGEKSAKRFAVNLLDMPRGEAIQIIKTLFDMLEKIHPCSECGLYTEEEICSICSSEERDRSVICVVEETFDAFAIEKTGKFKGVYHVIGGRLSPLEGITAEDLNIEKLVERVDKNGVKEIILATNPTVEGEATASYIHNLLKDRDVIISRIAYGLPFGAVLENADDFTLSKALEHKTII
SIO_010081: PERMA_RS02665
subclass of: SO_0000673
so part of: PERMA_RS02665
location: complement(481329..481928)
location: region:481329-481928:-1
so has part: feature:481329-481928:-1:exon

WP_049756082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481329-481928:-1:exon

PERMA_RS02670
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02670
old locus tag: PERMA_0533
so part of: sequence
location: complement(481934..482266)
location: region:481934-482266:-1
so has part: feature:481934-482266:-1:exon
subclass of: SO_0000010

position:481934:-1
position: 481934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482266:-1
position: 482266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481934-482266:-1:exon

PERMA_RS02670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02670
old locus tag: PERMA_0533
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675659.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YbaB/EbfC family nucleoid-associated protein
translation: MFNLGNLGEMMKMMKSMQENIEKAKEELRKEEIVVEVGGGMVKVILNGLGEIKDVLIDKTLLTEDNHEILQDLLVAAFNEANRRTKEVMGEKMTQAAGLPSNIPGLGNLF
SIO_010081: PERMA_RS02670
subclass of: SO_0000673
so part of: PERMA_RS02670
location: complement(481934..482266)
location: region:481934-482266:-1
so has part: feature:481934-482266:-1:exon

WP_012675659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481934-482266:-1:exon

PERMA_RS02675
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: dnaX
locus tag: PERMA_RS02675
old locus tag: PERMA_0534
so part of: sequence
location: complement(482267..483706)
location: region:482267-483706:-1
so has part: feature:482267-483706:-1:exon
subclass of: SO_0000010

position:482267:-1
position: 482267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483706:-1
position: 483706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482267-483706:-1:exon

PERMA_RS02675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: dnaX
locus tag: PERMA_RS02675
old locus tag: PERMA_0534
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460032.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit gamma/tau
translation: MAYEAFARKYRPKNFEQVIGQESVVKTLKNAIELERISHAYIFAGSRGLGKTTVSRILTKSLNCEKGVTPQPCGKCENCVEIEKGSFPDMYEIDAASNRGIDDIRSLRDNVNYAPIKGRYKVYIIDEAHMLTREAFNALLKTLEEPPPHNIFILATTELHKIPDTIRSRCQTFIFRPPTSSQIKEYLKRILNEEKIEYEERALDLLAEASEGGIRDSASLLDQAVTFGKGKVDIKSVEQLLGLIPETVIKDFVNHLKEKNIKEMILITEKLESEGYDLNVFWKQINDLIHRELVNLSIDGSSSFFEEKDLEDLIYIQTVFSKAVVEGRNFPNPKHIYQLAILKLKYIKNLVSLREIYEKGLKISKEQLKAQPEKKEESKEQLDIQTAILKIGKEAGGIVSAILKKASIKDEDQHITITVEKSLKDTLQEKIKIIEKYFGKPVKIEGKEVKQERRSKKRDEAVDKVLELFKGKIITYKEE
SIO_010081: PERMA_RS02675
subclass of: SO_0000673
so part of: PERMA_RS02675
location: complement(482267..483706)
location: region:482267-483706:-1
so has part: feature:482267-483706:-1:exon

WP_012676549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482267-483706:-1:exon

PERMA_RS02680
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02680
old locus tag: PERMA_0535
so part of: sequence
location: complement(483762..484541)
location: region:483762-484541:-1
so has part: feature:483762-484541:-1:exon
subclass of: SO_0000010

position:483762:-1
position: 483762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484541:-1
position: 484541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483762-484541:-1:exon

PERMA_RS02680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02680
old locus tag: PERMA_0535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674167.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosome-binding GTPase
translation: MEKPREWLREKSIAKKILSKSDVIFEVIDARIPFETRNSVVEKLAKERNKRLFIIMNKVDLVPESFAKKVKKEIEKEVPVILFSAHKSTGKREIENLIRKLSKENRLIKIGVLGYPNVGKSSVINKLKGKKVATTSPKPGMTRGEQLVKLAPNVFLIDTPGIITLEFQEDLALKGSWIPEKLEQPVEIAQKLIKKIQEKRPEAIKESYGVEPSQDPYETLKRIGERLNYRVSGGEVDIDRTAKKVLWDWIKGNIKAYWI
SIO_010081: PERMA_RS02680
subclass of: SO_0000673
so part of: PERMA_RS02680
location: complement(483762..484541)
location: region:483762-484541:-1
so has part: feature:483762-484541:-1:exon

WP_012675217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483762-484541:-1:exon

PERMA_RS02685
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: lptD
locus tag: PERMA_RS02685
old locus tag: PERMA_0537
so part of: sequence
location: 484601..486649
location: region:484601-486649:1
so has part: feature:484601-486649:1:exon
subclass of: SO_0000010

position:484601:1
position: 484601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486649:1
position: 486649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484601-486649:1:exon

PERMA_RS02685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: lptD
locus tag: PERMA_RS02685
old locus tag: PERMA_0537
inference: COORDINATES: protein motif:HMM:NF016348.2
GO component: GO:0019867 - outer membrane [Evidence IEA]
GO process: GO:0061024 - membrane organization [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS assembly protein LptD
translation: MKKKLTTILTLIYICFFSVYGQSQNIPVSIEADRIERDLSGRLIAEGNVVVHYRDYTLYADRIIYDQEKDIINLERNIRIKAKNFDLMGEKGWWNVKDETGEIYRIHGIMYGKYYVKARSLKKKGDRFYFKKGEFSLCPFDQYDWYFKSSSGSIKENDKLLAYNLTFRFCKIPLLYTPIFYYPTGSRQSGFLIPIIGQDTYNDFTLKIPFYLVTGRSSDLTFTFDYRNNQGQGLDVEYRYRFSRYSMFRGDIFYFKEKGKGFWWEGRDISPLKNRWRLYGNTRFKWEDFKVFFNIEIPSDPYFYEDFYNTSTLYKRYRSYTKSQLLAIYEDKDYSVELNFDFLYDLSKPTNEETLQRLPELRFYLKKRNLWEKVPLYFDFLSVNTNFYREKGDTGIRSDNLFNLSLYTNFMKVSNILELHQRTTVYVGLKDMNKGNAIRNLFHIRNITRMVEYRKYNRFTHSIIPQITFNYISKVKQDDLPYFDRDDRIPSVKDVDISLFNILNFNSNDFLRWEIGTGYTFLDQYYVGDKQYKGNVKPAKNSLYFKIDGITGENTLFYDFDRNQITRSISSLVIPFYGLFTYSVAHTFDKGSDTRSLHQISNTVSFSIRNISFRGTILNNLKDGYVQQKRVGIVLNRKCWSLTFTYIEDYKKTTGKTYQTYYLTLNILDIRYNLPFLMSKPQ
SIO_010081: PERMA_RS02685
subclass of: SO_0000673
so part of: PERMA_RS02685
location: 484601..486649
location: region:484601-486649:1
so has part: feature:484601-486649:1:exon

WP_012676159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484601-486649:1:exon

PERMA_RS02690
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02690
old locus tag: PERMA_0536
so part of: sequence
location: complement(486636..487304)
location: region:486636-487304:-1
so has part: feature:486636-487304:-1:exon
subclass of: SO_0000010

position:486636:-1
position: 486636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487304:-1
position: 487304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486636-487304:-1:exon

PERMA_RS02690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02690
old locus tag: PERMA_0536
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008289515.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator
translation: MKKKGTKTSIEKALDLIEALKENDNLGVTELSNILGLNKNNVFRLLATLEVKGLIEQDQETGHYRLGMKFLHLEHSYIKHLSFLKKARGTLRELRNEIGETVYISILHENSVIYLYAEESKKPVIVTSRIAKRYKAEDTAAGRTLIRSKKEKGFVVDYDMEKSEPEVSELATVIRDETGSPVAAISIVAPSYRLNQTQLEFYKVKLVKAAKKITEKLSATEA
SIO_010081: PERMA_RS02690
subclass of: SO_0000673
so part of: PERMA_RS02690
location: complement(486636..487304)
location: region:486636-487304:-1
so has part: feature:486636-487304:-1:exon

WP_012675247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486636-487304:-1:exon

PERMA_RS02695
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: miaA
locus tag: PERMA_RS02695
old locus tag: PERMA_0538
so part of: sequence
location: 487381..488301
location: region:487381-488301:1
so has part: feature:487381-488301:1:exon
subclass of: SO_0000010

position:487381:1
position: 487381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488301:1
position: 488301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487381-488301:1:exon

PERMA_RS02695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: miaA
locus tag: PERMA_RS02695
old locus tag: PERMA_0538
EC number: 2.5.1.75
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546289.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
translation: MEKILVITGVTATGKTDLSIELAKRLDGEIVSADSMMVYRYMDIGTAKPSKEEMEEVPHHLIDVVDPSYDFSVKDFIELSQESIKDIVGRGKLPIVVGGTWLYIQSLLYGLTDAPEGDWKIREQLYRRDTEDLYNELQNVDREYAEKIHPNDKRRIVRALEVYYISKKPFSYFINRHKFRENRYDFVGFVLEREREELMERIEKRVDRMFEQGLVDEVRKLLDMGYENAITSKQAIGYKEVLPYLEGEISLEQAREEIIRNTKDFAKRQIRTFRSKFRDGEKWERLNISNYTNGELLYKIIEKYKS
SIO_010081: PERMA_RS02695
subclass of: SO_0000673
so part of: PERMA_RS02695
location: 487381..488301
location: region:487381-488301:1
so has part: feature:487381-488301:1:exon

WP_015898907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487381-488301:1:exon

PERMA_RS02700
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: hfq
locus tag: PERMA_RS02700
old locus tag: PERMA_0539
so part of: sequence
location: 488319..488510
location: region:488319-488510:1
so has part: feature:488319-488510:1:exon
subclass of: SO_0000010

position:488319:1
position: 488319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488510:1
position: 488510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488319-488510:1:exon

PERMA_RS02700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: hfq
locus tag: PERMA_RS02700
old locus tag: PERMA_0539
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546292.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006378 - mRNA polyadenylation [Evidence IEA]; GO:0016070 - RNA metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA chaperone Hfq
translation: MNIQDELLEELKEEGKEVTIYLIRGTRITGKIVGADQFTILLDVNGEKQLIYKHAISTIVAET
SIO_010081: PERMA_RS02700
subclass of: SO_0000673
so part of: PERMA_RS02700
location: 488319..488510
location: region:488319-488510:1
so has part: feature:488319-488510:1:exon

WP_012676213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488319-488510:1:exon

PERMA_RS02705
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: hflX
locus tag: PERMA_RS02705
old locus tag: PERMA_0540
so part of: sequence
location: 488532..489653
location: region:488532-489653:1
so has part: feature:488532-489653:1:exon
subclass of: SO_0000010

position:488532:1
position: 488532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489653:1
position: 489653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488532-489653:1:exon

PERMA_RS02705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: hflX
locus tag: PERMA_RS02705
old locus tag: PERMA_0540
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010881247.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase HflX
translation: MRCILVGIKTKEKKDKELKQSLSELEGLVEAVEGVTLGKLYQKKDIPDPSTFIGKGKVKQLKELIEGTKADTVVFDADLTPVQITNIEKITQANVLDRTDLILQIFSQRAKTRQAKLQVELATLQHELPRVYGQKGKALSRIGGGMKTKGAGEKIGEIKVRTIKDRISKIKKELEKIKKQRYQQRKWRNKDPNILKVSLVGYTNAGKSTLLKKLTKRDTFVSDQLFATLDTKTSYIAFPDIGKKVLITDTVGFVKNMPKELMDAFMATLEELEDADLILHVIDISDENWVEKMEAVEDILKKINVSDKPLVVVLNKIDKLVPSPEYIEEADHTMLTGDRETVVISTEKGWNIDKLHNILRKYALRKDTVSVGG
SIO_010081: PERMA_RS02705
subclass of: SO_0000673
so part of: PERMA_RS02705
location: 488532..489653
location: region:488532-489653:1
so has part: feature:488532-489653:1:exon

WP_012675345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488532-489653:1:exon

PERMA_RS02710
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02710
old locus tag: PERMA_0541
so part of: sequence
location: 489655..490002
location: region:489655-490002:1
so has part: feature:489655-490002:1:exon
subclass of: SO_0000010

position:489655:1
position: 489655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490002:1
position: 490002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489655-490002:1:exon

PERMA_RS02710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02710
old locus tag: PERMA_0541
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675502.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine triad nucleotide-binding protein
translation: MSECVFCKIVNKEIPADIVYEDDLILAFKDIAPQAKVHVLIIPKEHIPNNLYLEGRHKPVVGHIILKVNEIAKQLGIAETGFRLIVNSGKDSGQEVYHLHWHLLGGEPLGRLICK
SIO_010081: PERMA_RS02710
subclass of: SO_0000673
so part of: PERMA_RS02710
location: 489655..490002
location: region:489655-490002:1
so has part: feature:489655-490002:1:exon

WP_012675502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489655-490002:1:exon

PERMA_RS02715
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02715
old locus tag: PERMA_0542
so part of: sequence
location: 489993..490595
location: region:489993-490595:1
so has part: feature:489993-490595:1:exon
subclass of: SO_0000010

position:489993:1
position: 489993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490595:1
position: 490595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489993-490595:1:exon

PERMA_RS02715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02715
old locus tag: PERMA_0542
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459980.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA family protein
translation: MQVKEKENVETTVDTRGLFCPLPLTIVSKKLKEIPEGKRLKVLADDKAFKKDVKFWCQETGNKLIDFKEVDGHYEAIIERGKGFHGEGLWEKIKFISLGIKLHIIQHILDLLPSKKPKYLITFVSIAEGLRADKWLKERGIDDYVLLPVPDEIYPHCGLVFGLRSKEKAVEIFNTLKENKFAVEDIHIVDRDKKYPVLQI
SIO_010081: PERMA_RS02715
subclass of: SO_0000673
so part of: PERMA_RS02715
location: 489993..490595
location: region:489993-490595:1
so has part: feature:489993-490595:1:exon

WP_012676621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489993-490595:1:exon

PERMA_RS02720
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02720
old locus tag: PERMA_0543
so part of: sequence
location: complement(490597..491205)
location: region:490597-491205:-1
so has part: feature:490597-491205:-1:exon
subclass of: SO_0000010

position:490597:-1
position: 490597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491205:-1
position: 491205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490597-491205:-1:exon

PERMA_RS02720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02720
old locus tag: PERMA_0543
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674289.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DeoR family transcriptional regulator
translation: MSRKEKILEILREKKEVTVKELSNIFKVSEMTIYRDIKELEKEGEIKRKHGSVLLNTKENRETLTVDTCPICEKPITRSHPYKIIVENTKVIEACCEHCGLLLHQKYADKEVSAITYDFITENPISALNAFFVVGSSAVPCCSPSVIPFASREDAEKFQKGFGGKVMTFVEAYNEITNKMNINIKSCCAPQQNVTFKLDDLK
SIO_010081: PERMA_RS02720
subclass of: SO_0000673
so part of: PERMA_RS02720
location: complement(490597..491205)
location: region:490597-491205:-1
so has part: feature:490597-491205:-1:exon

WP_012676917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490597-491205:-1:exon

PERMA_RS02725
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: hisB
locus tag: PERMA_RS02725
old locus tag: PERMA_0544
so part of: sequence
location: complement(491218..491802)
location: region:491218-491802:-1
so has part: feature:491218-491802:-1:exon
subclass of: SO_0000010

position:491218:-1
position: 491218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491802:-1
position: 491802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491218-491802:-1:exon

PERMA_RS02725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: hisB
locus tag: PERMA_RS02725
old locus tag: PERMA_0544
EC number: 4.2.1.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012676033.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: imidazoleglycerol-phosphate dehydratase HisB
translation: MRKASIKRETKETQIELSLNLDGSGKYSIDTPVGFLNHMLETFSKHSLIDLEVLASGDVHVSHHHTVEDVGIVLGMAVKEALGDKKGIRRFGYAIVPMDEALSLCSIDISGRPLLFYDDLGLRGKITNFDFELMEEFFKGFTLYSGITVHLKALSGKNLHHIAESLTKSLAVALRQAIEIDPRRKDTPSTKGSL
SIO_010081: PERMA_RS02725
subclass of: SO_0000673
so part of: PERMA_RS02725
location: complement(491218..491802)
location: region:491218-491802:-1
so has part: feature:491218-491802:-1:exon

WP_012676033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491218-491802:-1:exon

PERMA_RS02730
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02730
old locus tag: PERMA_0545
so part of: sequence
location: complement(491814..492539)
location: region:491814-492539:-1
so has part: feature:491814-492539:-1:exon
subclass of: SO_0000010

position:491814:-1
position: 491814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492539:-1
position: 492539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491814-492539:-1:exon

PERMA_RS02730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02730
old locus tag: PERMA_0545
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008289698.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MKISEEKECPLCKGLGWIQDKNGVKKCTCMYSLLTENIFRRMNIPKRYQDKELSNFIINKAYKHDLIISKVEEYINSDDYLEGKGIFFVGPPGVGKTHLAVSILKEFFRRRKIVGLFYDTRSLLFDLKATFDGSASGREILEEVVKTPILVLDDLGSERLSEWARDILHYIIINRYNELRPVIITSNIEIKAKKVENDVKETLEERMGGAIASRLSEMCQIITVKGQDMRTSKLIQLQHKK
SIO_010081: PERMA_RS02730
subclass of: SO_0000673
so part of: PERMA_RS02730
location: complement(491814..492539)
location: region:491814-492539:-1
so has part: feature:491814-492539:-1:exon

WP_012676020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491814-492539:-1:exon

PERMA_RS02735
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02735
old locus tag: PERMA_0546
so part of: sequence
location: complement(492603..492923)
location: region:492603-492923:-1
so has part: feature:492603-492923:-1:exon
subclass of: SO_0000010

position:492603:-1
position: 492603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492923:-1
position: 492923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492603-492923:-1:exon

PERMA_RS02735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02735
old locus tag: PERMA_0546
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIRIIAFLLFIFLTALSYGEEDKSKIEEGFQKIKEGISEVFSGIKEKLSKEETEEKIKKLKEKIKELEEKIKNQDWDEKKEALQKKLDQLKEKLKELSEKDSENQK
SIO_010081: PERMA_RS02735
subclass of: SO_0000673
so part of: PERMA_RS02735
location: complement(492603..492923)
location: region:492603-492923:-1
so has part: feature:492603-492923:-1:exon

WP_015899022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492603-492923:-1:exon

PERMA_RS02740
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02740
old locus tag: PERMA_0547
so part of: sequence
location: complement(492920..493522)
location: region:492920-493522:-1
so has part: feature:492920-493522:-1:exon
subclass of: SO_0000010

position:492920:-1
position: 492920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493522:-1
position: 493522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492920-493522:-1:exon

PERMA_RS02740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02740
old locus tag: PERMA_0547
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012674637.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MINIEDFEKLPTREKIIRVSADIIVKEGLKKFTAKNIADRLNITDAAIFKHFGSMDDIILEIIERYVSECSKSAEEATKKGENVKEKLEHVLRAHIRVLEETRGAVPVLCFEFSRTEEKKFHEILLKFLNSYKERISALVREGQKEGCIRPELDPEDTAMLFIGLIQAKVFAYIMSGKEGPIIENPDIFISEVFYGIMTR
SIO_010081: PERMA_RS02740
subclass of: SO_0000673
so part of: PERMA_RS02740
location: complement(492920..493522)
location: region:492920-493522:-1
so has part: feature:492920-493522:-1:exon

WP_012675270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492920-493522:-1:exon

PERMA_RS02745
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02745
old locus tag: PERMA_0548
so part of: sequence
location: complement(493519..494400)
location: region:493519-494400:-1
so has part: feature:493519-494400:-1:exon
subclass of: SO_0000010

position:493519:-1
position: 493519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494400:-1
position: 494400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493519-494400:-1:exon

PERMA_RS02745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02745
old locus tag: PERMA_0548
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007546832.1
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DHHA1 domain-containing protein
translation: MEEKVVCIYHKNCTDGTVSAAVLMKKYPKCKAFPLEHGYKPEDFQEILDQVDSDTVVYITDFSLRKEDNLKLIEKAKKVINIDHHIGIKDQLKQLSEENAKFEFYFDNDHSGASLTYMYLFGEDIPKLIKLVEDKDIWKWRYGDETKYANAYLILLTNKPEEVKELIDGDINDILEKGKIVSQFIDYLINRFVEKSEETFLQIGSYKVKGYNTGLFQSEIGNILSEKYGEAVVLFNISGYNVKLSFRSCEGQEPSALELAKILGGGGHRNAAGALIPLKQFFSMVIFQDGGEK
SIO_010081: PERMA_RS02745
subclass of: SO_0000673
so part of: PERMA_RS02745
location: complement(493519..494400)
location: region:493519-494400:-1
so has part: feature:493519-494400:-1:exon

WP_012676360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493519-494400:-1:exon

PERMA_RS02750
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02750
old locus tag: PERMA_0549
so part of: sequence
location: 494600..495589
location: region:494600-495589:1
so has part: feature:494600-495589:1:exon
subclass of: SO_0000010

position:494600:1
position: 494600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495589:1
position: 495589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494600-495589:1:exon

PERMA_RS02750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02750
old locus tag: PERMA_0549
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459161.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleotide-diphosphate reductase subunit beta
translation: MKKLQFIGKTSVKDNIRLTENPRYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKSLTPTEKDLFDTSVGYFASSELLVQNVLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTFEMDRKRIYNITLEDKLLMEKQELIIRAVDRITYGKADPDTLEGKKQILTAILLNNIIQEGMFFYSAFAHFFAMKDTGKMKNVVSGVELILIDESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNYLKTKFGGTTIFGVSYKELEKYMKYIADRRLEELGFDPQFKIDQNPLKFLQKEDVKKLTNFFEVSSTEYTNF
SIO_010081: PERMA_RS02750
subclass of: SO_0000673
so part of: PERMA_RS02750
location: 494600..495589
location: region:494600-495589:1
so has part: feature:494600-495589:1:exon

WP_012676212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494600-495589:1:exon

PERMA_RS02755
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02755
old locus tag: PERMA_0551
so part of: sequence
location: 495815..498229
location: region:495815-498229:1
so has part: feature:495815-498229:1:exon
subclass of: SO_0000010

position:495815:1
position: 495815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498229:1
position: 498229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495815-498229:1:exon

PERMA_RS02755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02755
old locus tag: PERMA_0551
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012459160.1
GO component: GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO function: GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO process: GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonucleoside-diphosphate reductase subunit alpha
translation: MQRIVVKRDGTEEKFQMKKLINAIFALLEGMDIPDDYEIVFKVAKELDLKIPERVTTQELDTLVLKAIEQLIPKHYIYDTLAAKQLLKLINREIDKRFSSFKEAIEFGVNENLYKPELLDFDLDRLEDALDYSRDALLDYFGMTTLKDRYFTRDREGNIIEKPQWFFMRVAMGIGNNEDEVIKVYNKISKLEYLHSTPTLYNSGTITHQYSSCYVNVIDDSLESIMDKAKETAFLAKYAGGVGTDVTRIRATGSKIHSLNAKSSGVIPFIKIFDTIVNAIQQGGRRRSSQVMYLQPWHLDIDAFLDLRETTGNPYFRTPSLNTAVWMPDEIMRRIKEGEPLYLFDPAECPELVTAWGEEFTKKYFECIEKAETGHLKLWKKIDSREWFNRYLFKLAKTGHPWLTFKDRHNEHNPCPEYGVINSSNLCTEISIPNSPESTAVCTLASVNLAKHLNEDRTDIDWDKLKDTIETMVLALDNILDKNFYPSEESRKNTMDLRPLGIGLMGFAETLVELGIPYDSDTAVEFAEKVAKFMRDTAYRKSEELAKERGPFPHYEEMKEKGKPYPYPPRRNAVLLAIAPTASISIIAGTTSSIDSYFSNVFSRDTLSGKFIVVNKQLMKKLEELDMWNEEMAEKIKAHGGSVQFIDELEGKIDKRLFKGAYEIHPFRQIDIAAAFQKYVDQAVSKSIYIEEELRGDMFDIYMYAWEKGLKSTYYCFIDKTVKGEKYTQKVNKRGTRRGFGLRKAASEESETVKTQTTVEEDIEQIERMAREKYGDEVVDKVKSGNIDACPTDPLLNKICPSCE
SIO_010081: PERMA_RS02755
subclass of: SO_0000673
so part of: PERMA_RS02755
location: 495815..498229
location: region:495815-498229:1
so has part: feature:495815-498229:1:exon

WP_012676370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:495815-498229:1:exon

PERMA_RS10735
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10735
old locus tag: PERMA_0552
so part of: sequence
location: 498275..498439
location: region:498275-498439:1
so has part: feature:498275-498439:1:exon
subclass of: SO_0000010

position:498275:1
position: 498275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498439:1
position: 498439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498275-498439:1:exon

PERMA_RS10735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10735
old locus tag: PERMA_0552
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEIKEKKGHTAYNPDDYFCQICVYKSCLRQNKGREIIRNRMKQIEKKKTGSDL
SIO_010081: PERMA_RS10735
subclass of: SO_0000673
so part of: PERMA_RS10735
location: 498275..498439
location: region:498275-498439:1
so has part: feature:498275-498439:1:exon

WP_012675338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498275-498439:1:exon

PERMA_RS02760
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02760
old locus tag: PERMA_0553
so part of: sequence
location: 498735..499745
location: region:498735-499745:1
so has part: feature:498735-499745:1:exon
subclass of: SO_0000010

position:498735:1
position: 498735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499745:1
position: 499745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498735-499745:1:exon

PERMA_RS02760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02760
old locus tag: PERMA_0553
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012460367.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MAAGVANAGSLTVANSDITLYGGVSAGYQYLTTEHSAGSLTNNDYFSVNNVIIGLKKDADANSPIGFNAAFGNFTVPTVIASSATVNSNNLIAYGKTSSFMPWLAYVTIAPVQGLSVDAGLLWNKFGEAPITILNSNINRGILFTGHPVLFAGARVNYDAGVAKVYVGYNQGGGLLQAGVSDAIEAGAMADLGAAKVGLHVYDEASGRNIYVLCVKSDLGVAKVGLEIDYTTLDTAPAGADDSAYGVALNLDPAVSNTVSVPIRIEYIDNKNSGIYLTGKDNAMSLTVTPTYKPTGNTFVRAEIAYTSTDAKVFVDDSGSAKDNRTYLGFEAGFLF
SIO_010081: PERMA_RS02760
subclass of: SO_0000673
so part of: PERMA_RS02760
location: 498735..499745
location: region:498735-499745:1
so has part: feature:498735-499745:1:exon

WP_238527227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498735-499745:1:exon

PERMA_RS02765
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02765
old locus tag: PERMA_0554
so part of: sequence
location: 499862..500212
location: region:499862-500212:1
so has part: feature:499862-500212:1:exon
subclass of: SO_0000010

position:499862:1
position: 499862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500212:1
position: 500212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499862-500212:1:exon

PERMA_RS02765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS02765
old locus tag: PERMA_0554
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: MlpB
translation: MRSKIFSIVLMLLLISGLSYAIDSLVKPENVCMVNNRYLGVKQIPVEVDGKVYYGCCKMCVGRIKNNESIRYAIDPVSGKKVDKATALILALKDGRVLYFESRENVERFLKSFKIH
SIO_010081: PERMA_RS02765
subclass of: SO_0000673
so part of: PERMA_RS02765
location: 499862..500212
location: region:499862-500212:1
so has part: feature:499862-500212:1:exon

WP_012675580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499862-500212:1:exon

PERMA_RS02770
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: gatB
locus tag: PERMA_RS02770
old locus tag: PERMA_0555
so part of: sequence
location: complement(500255..501679)
location: region:500255-501679:-1
so has part: feature:500255-501679:-1:exon
subclass of: SO_0000010

position:500255:-1
position: 500255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501679:-1
position: 501679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500255-501679:-1:exon

PERMA_RS02770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: gatB
locus tag: PERMA_RS02770
old locus tag: PERMA_0555
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675967.1
GO function: GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
translation: MEFEPVIGLEVHVQMSTNTKCFCSCKIEFGAEPNTNVCPVCLGMPGSLPVLNKKALEYAIKASLALNCEVHELSVFARKNYFYPDLPKGYQISQYDKPLATNGYIDIKVNDKTERIRIHRLHMEEDAGKTIHKGSYSYVDLNRAGTPLMEIVSEPDIRSAVGARLYLEKLRNIMRYIGVSDADMEKGQLRCDVNISLRPKGEEKFGTKVEIKNINSFRFVQKAIEYEIERQARILRKGGEIVQETRLFDEKTGKTFTMRTKEEAHDYRYFPDPDLIPVRITKEYIEEIRKSLPELPDQKAERYVKELKLTEYDAEVLVADKDRALFFEKAVSVYSENPKSIANWIINELLGKLNEEGIEISNSPVRPEHIAELVQLIDKGDISSKIGKEVFEEVFKTGKSPKTIVEEKGLKQVSDEGEIRKIVEEVLNNHPAEVEKYKAGNQKLMGFFVGQVMKATRGKANPKLVNKILQELLK
SIO_010081: PERMA_RS02770
subclass of: SO_0000673
so part of: PERMA_RS02770
location: complement(500255..501679)
location: region:500255-501679:-1
so has part: feature:500255-501679:-1:exon

WP_012675967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500255-501679:-1:exon

PERMA_RS02775
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: ahcY
locus tag: PERMA_RS02775
old locus tag: PERMA_0556
so part of: sequence
location: 502038..503294
location: region:502038-503294:1
so has part: feature:502038-503294:1:exon
subclass of: SO_0000010

position:502038:1
position: 502038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503294:1
position: 503294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502038-503294:1:exon

PERMA_RS02775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: ahcY
locus tag: PERMA_RS02775
old locus tag: PERMA_0556
EC number: 3.13.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012673819.1
GO function: GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO process: GO:0006730 - one-carbon metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylhomocysteinase
translation: MDYHVKDLSLAEKGVLRIEWAEKEMPVLRQIRKRFEKEKPLKGVKIAACLHVTTETANLMITLKAGGADVYLTASNPLSTQDDVAAALVKEFDIPVFAIHGEDRDTYYQHLYAVLDKEPNITMDDGGDLISTLHKEKQNLLDNVFGGTEETTTGVIRFKAMEKDGVLKFPVIAVNDAYTKHLFDNRYGTGQSTIDGILRATNRLLAGSVFVIAGYGWCGRGVAMRAAGMGAEVIVTEVDPLKALEARMDGFRVMPMIEAAKIGDFFVTVTGNINVIDKHHFEVMKDGAIVANSGHFDVEINIKALEELSVSQRDIRENVREYRLPDGRNIYLLAEGRLVNLAAAEGHPASVMDMSFANQALSAEYIYKNHDSLKPKVYKVPDELDFEVARLKLNAMGIQIDQLTEEQKEYLSSWEHGT
SIO_010081: PERMA_RS02775
subclass of: SO_0000673
so part of: PERMA_RS02775
location: 502038..503294
location: region:502038-503294:1
so has part: feature:502038-503294:1:exon

WP_012676899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:502038-503294:1:exon

PERMA_RS02780
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS02780
old locus tag: PERMA_0557
so part of: sequence
location: 503322..503546
location: region:503322-503546:1
so has part: feature:503322-503546:1:exon
subclass of: SO_0000010

position:503322:1
position: 503322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition