Persephonella marina EX-H1 plasmid unnamed, complete sequence.
type: Entry
definition: Persephonella marina EX-H1 plasmid unnamed, complete sequence.
sequence version: NC_012439.1
sequence date: 2023-02-27
sequence: sequence
division: CON
label: NC_012439.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02604029
keyword: RefSeq
source: Persephonella marina EX-H1
organism: Persephonella marina EX-H1
taxonomy: Bacteria; Aquificota; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.
reference: 1
references: 19136599
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001231.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/27/2023 10:59:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,097\nCDSs (total) :: 2,048\nGenes (coding) :: 2,045\nCDSs (with protein) :: 2,045\nGenes (RNA) :: 49\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 40\nncRNAs :: 3\nPseudo Genes (total) :: 3\nCDSs (without protein) :: 3\nPseudo Genes (ambiguous residues) :: 0 of 3\nPseudo Genes (frameshifted) :: 0 of 3\nPseudo Genes (incomplete) :: 3 of 3\nPseudo Genes (internal stop) :: 0 of 3\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 53682
topology: circular
so has quality: SO_0000988
location: 1..53682
location: region:1-53682:1
RO_0002162: 123214

NC_012439
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02604029
type: BioSample
SIO_000068: biosample

1
title: Complete and draft genome sequences of six members of the Aquificales
author: Reysenbach, A.L.
author: Hamamura, N.
author: Podar, M.
author: Griffiths, E.
author: Ferreira, S.
author: Hochstein, R.
author: Heidelberg, J.
author: Johnson, J.
author: Mead, D.
author: Pohorille, A.
author: Sarmiento, M.
author: Schweighofer, K.
author: Seshadri, R.
author: Voytek, M.A.
journal: J Bacteriol
volume: 191
issue: 6
pages: 1992-1993
year: 2009
pubmed: 19136599

19136599
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Heidelberg, J.F.
author: Reysenbach, A.-L.
author: Nelson, W.C.
journal: Submitted (13-NOV-2008) J. Craig Venter Institute, 9712 Medical Center Dr, Rockville, MD 20850, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53682:1
position: 53682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-53682:1:source
so part of: sequence
organism: Persephonella marina EX-H1
mol type: genomic DNA
strain: EX-H1
type material: type strain of Persephonella marina
plasmid: unnamed

123214
type: Taxonomy
SIO_000068: taxonomy

PERMA_RS10085
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10085
so part of: sequence
location: join(53084..53682,1..109)
location: region:1-53682:1
so has part: feature:53084-53682:1:exon
so has part: feature:1-109:1:exon
subclass of: SO_0000010

urn:…
SIO_000300: 1
SIO_000628: feature:53084-53682:1:exon

position:53084:1
position: 53084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1-109:1:exon

position:109:1
position: 109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PERMA_RS10085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012675167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVLKDMKFSVEGDNLRVLIEKDRKAEASLSGFSAFRFTGACFSSGYKIDGFEKERIGKTLVEPDKIRVYREENGKPDRVFERFTQDEFITIATYIQKNLNTNELVFSLRDKEGKFDYSVNVSPDKIAVFDNQTMNMKAINLNPFFIFRIKAVIELAVLGLLPSPVFIRGTENNISIGEAVVPEKELTEQHEQNIKKIIEQVDKTEDFETKQVKEPKAVVEEKKSNKVNPQDWWG
SIO_010081: PERMA_RS10085
subclass of: SO_0000673
so part of: PERMA_RS10085
location: join(53084..53682,1..109)
location: region:1-53682:1
so has part: feature:53084-53682:1:exon
so has part: feature:1-109:1:exon

WP_041531180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53084-53682:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1-109:1:exon

PERMA_RS10090
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10090
old locus tag: PERMA_A0001
so part of: sequence
location: 113..892
location: region:113-892:1
so has part: feature:113-892:1:exon
subclass of: SO_0000010

position:113:1
position: 113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892:1
position: 892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113-892:1:exon

PERMA_RS10090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10090
old locus tag: PERMA_A0001
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVLKDMKFSVEGDNLRVLIEKDRKAEASLSGFSAFRFTGACFSSGYKIDGFEKERIGKTLVEPDKIRVYREENGKPDRVFERFTQDEFITIATYIQKNLNTNELVFSLRDKEGKFDYSVNVSPDKIAVFDNQTMNMKAINLNPFFIFRIKAVIELAVLGLLPSPVFIRGTENNISIGEAVVPEKELTEQHEQNIKKIIDVSKKQGLNQYALIRQYYKQQKIPYTRKVIFQIGKKNNKIKVHLPVSYAFAVKIFFETCN
SIO_010081: PERMA_RS10090
subclass of: SO_0000673
so part of: PERMA_RS10090
location: 113..892
location: region:113-892:1
so has part: feature:113-892:1:exon

WP_012675167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113-892:1:exon

PERMA_RS10095
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10095
old locus tag: PERMA_A0002
so part of: sequence
location: 972..2924
location: region:972-2924:1
so has part: feature:972-2924:1:exon
subclass of: SO_0000010

position:972:1
position: 972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2924:1
position: 2924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972-2924:1:exon

PERMA_RS10095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10095
old locus tag: PERMA_A0002
inference: COORDINATES: protein motif:HMM:NF014581.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraM recognition domain-containing protein
translation: MGIKEAVLLIPLLGYILFVRDSIRWAKRISEKDPNPKRAKYTNLFLITVSIFAIPIFMILVFLFSPTIGAFVWSGAALIFSFYVAYGLYGFLKSRLPNFKSKYKIEPITPEFKIFREPEIKISASAINKHVHVLAPTGSGKTKSIVGPVLQQAIDKGLGVMSIDPKGDNEVSLACIDLLQKQGRLKDYWYYDVMLPNYSRSYNPLYSGIKYNNPAQLGVLIIATMPKSGGAATFYEKVQSEFTRAMVRLLSLVNHTGKMANFIDLYSILAYLPYSIEYLLDTYQANAKFKDELAELWIKTIAQEAAENQNFRQFLRGLQQHLALYAFTFHPKLLNSYNPEIKISEGFRQSKLMNFSLRSLDFPSGESLDIGKMILMDLQSYAAYKTRENIQNEFPDIVIVDEAPQVIPPEFQKIFEMARGAGIGVMVLHQSTKQFDNIQKGMFENIFTNCHVKVCLGAADRETAEFYARLLGEELKMFKTYSRGGENVWKKPIDAILPHWNELVSERYDYRVRPEDIINMPIGEGLLIVREKDLFGVRGKTYFFATKMEGKPWYYLPKIPYNDDWKDENLGLNLLSKFQKEFGDRIPDEDRKAVRNKKKQIANNIEQRADKIREELGDEIGINMVDEGIASVQNVPDELTNILGATDGML
SIO_010081: PERMA_RS10095
subclass of: SO_0000673
so part of: PERMA_RS10095
location: 972..2924
location: region:972-2924:1
so has part: feature:972-2924:1:exon

WP_012675177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972-2924:1:exon

PERMA_RS10800
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10800
old locus tag: PERMA_A0003
so part of: sequence
location: 2911..3087
location: region:2911-3087:1
so has part: feature:2911-3087:1:exon
subclass of: SO_0000010

position:2911:1
position: 2911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087:1
position: 3087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2911-3087:1:exon

PERMA_RS10800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10800
old locus tag: PERMA_A0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012992628.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MECFNGNEWLKKSLEEIFTPPRENWDELRLWVYRFGDDWDIFLIELTIPKLLEEMSEK
SIO_010081: PERMA_RS10800
subclass of: SO_0000673
so part of: PERMA_RS10800
location: 2911..3087
location: region:2911-3087:1
so has part: feature:2911-3087:1:exon

WP_012675165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2911-3087:1:exon

PERMA_RS10100
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10100
old locus tag: PERMA_A0005
so part of: sequence
location: 3084..3803
location: region:3084-3803:1
so has part: feature:3084-3803:1:exon
subclass of: SO_0000010

position:3084:1
position: 3084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3803:1
position: 3803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3084-3803:1:exon

PERMA_RS10100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10100
old locus tag: PERMA_A0005
inference: COORDINATES: protein motif:HMM:NF015639.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YkgJ family cysteine cluster protein
translation: MKEKTFIDCQKGTANCCKDNFIELTLDEFERFYDKAPIGIGVKVYPHREEQYFFRYAGIYFYFSFGIIVNAGCIFLDGNKCSIYEDRPGMCQIFPVRGHDKKLKKFAADLDFCKECGQDCVNDIGEGFEFSYANRLSKPLEDKAKKVFRKLKKDKVILNKQVFKSLYDHLKGNYPKELMSILLEAVSAYRGKEDLWLSPIDPHIYFLIEDFLKKRNLDAERFYEAQLKFLTEMGTIKKL
SIO_010081: PERMA_RS10100
subclass of: SO_0000673
so part of: PERMA_RS10100
location: 3084..3803
location: region:3084-3803:1
so has part: feature:3084-3803:1:exon

WP_012675169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3084-3803:1:exon

PERMA_RS10105
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10105
old locus tag: PERMA_A0004
so part of: sequence
location: complement(3787..4362)
location: region:3787-4362:-1
so has part: feature:3787-4362:-1:exon
subclass of: SO_0000010

position:3787:-1
position: 3787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4362:-1
position: 4362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3787-4362:-1:exon

PERMA_RS10105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10105
old locus tag: PERMA_A0004
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITAEIFEAIKFYKELIEKVEKENSNPFEISIEKLKELAGDSIFHNGIIISLLAKLIRLKAEYLEKQIIPQTEEEKKEAVKSIFKQVLQEETGLEEDNIETLLMVDSIKEKLKKPKAVKPKKISYQEFQEIAKSQIREVLHEDTDYNTYALKIAKQIEKGTFKIKSYKDFIGLMFAIYLFNLEINDIKAFL
SIO_010081: PERMA_RS10105
subclass of: SO_0000673
so part of: PERMA_RS10105
location: complement(3787..4362)
location: region:3787-4362:-1
so has part: feature:3787-4362:-1:exon

WP_012675170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3787-4362:-1:exon

PERMA_RS10110
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10110
old locus tag: PERMA_A0006
so part of: sequence
location: complement(4349..4861)
location: region:4349-4861:-1
so has part: feature:4349-4861:-1:exon
subclass of: SO_0000010

position:4349:-1
position: 4349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4861:-1
position: 4861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4349-4861:-1:exon

PERMA_RS10110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10110
old locus tag: PERMA_A0006
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFKYILFKETPAPDKLHGYIIEHLLTTKDRRELEKRLAELGINTARKDIKLAEREALQAYEKAGKPLSIFIYRFPVLSVDENSDEWIYIDVEYYPVKELLKLIEKETGKKIKLGQGKIRVNTTYRQVILKQYNPEIKSYKSLLGYPLKKDNSERVYQLLKKLEAIFNDYS
SIO_010081: PERMA_RS10110
subclass of: SO_0000673
so part of: PERMA_RS10110
location: complement(4349..4861)
location: region:4349-4861:-1
so has part: feature:4349-4861:-1:exon

WP_041531181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4349-4861:-1:exon

PERMA_RS10115
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10115
old locus tag: PERMA_A0008
so part of: sequence
location: complement(5151..5720)
location: region:5151-5720:-1
so has part: feature:5151-5720:-1:exon
subclass of: SO_0000010

position:5151:-1
position: 5151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5720:-1
position: 5720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5151-5720:-1:exon

PERMA_RS10115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10115
old locus tag: PERMA_A0008
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTLERALEKEIKEMKDRVQGWITYIADEMSNGFNSSQLIEFAEEGYIDYLYDEYGKELYGELGDELLPVFSSTLKEEIISEAKKRIEAELEDYKTIALVLGVQHIHVPHKYFPSFKVLSEKQLDERGVKEILEKNGVSPHAWGVMANTNQWGNYWFIVLNKENYKEMIEDDLDVAIAILRSNYDVFED
SIO_010081: PERMA_RS10115
subclass of: SO_0000673
so part of: PERMA_RS10115
location: complement(5151..5720)
location: region:5151-5720:-1
so has part: feature:5151-5720:-1:exon

WP_012675135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5151-5720:-1:exon

PERMA_RS10120
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10120
old locus tag: PERMA_A0009
so part of: sequence
location: complement(5879..6067)
location: region:5879-6067:-1
so has part: feature:5879-6067:-1:exon
subclass of: SO_0000010

position:5879:-1
position: 5879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6067:-1
position: 6067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5879-6067:-1:exon

PERMA_RS10120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10120
old locus tag: PERMA_A0009
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIMDSALAVEIIKKVENPDGVMSVMASAGHYAGHLGVFFLLVVSVYIYIRLFTEAITNKDKE
SIO_010081: PERMA_RS10120
subclass of: SO_0000673
so part of: PERMA_RS10120
location: complement(5879..6067)
location: region:5879-6067:-1
so has part: feature:5879-6067:-1:exon

WP_012675144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5879-6067:-1:exon

PERMA_RS10125
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10125
old locus tag: PERMA_A0010
so part of: sequence
location: complement(6064..6372)
location: region:6064-6372:-1
so has part: feature:6064-6372:-1:exon
subclass of: SO_0000010

position:6064:-1
position: 6064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6372:-1
position: 6372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6064-6372:-1:exon

PERMA_RS10125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10125
old locus tag: PERMA_A0010
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDLLISILVFFMLLFLFFGFGRMFIHSDEIELCFTKDKAFIPEGMKISREVDEYICWTAKYEGQDFFGRYYYIRTEKGTKIGIPVKAPDFVAFISHKEGLK
SIO_010081: PERMA_RS10125
subclass of: SO_0000673
so part of: PERMA_RS10125
location: complement(6064..6372)
location: region:6064-6372:-1
so has part: feature:6064-6372:-1:exon

WP_012675153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6064-6372:-1:exon

PERMA_RS10130
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10130
old locus tag: PERMA_A0011
so part of: sequence
location: complement(6369..7094)
location: region:6369-7094:-1
so has part: feature:6369-7094:-1:exon
subclass of: SO_0000010

position:6369:-1
position: 6369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7094:-1
position: 7094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6369-7094:-1:exon

PERMA_RS10130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10130
old locus tag: PERMA_A0011
inference: COORDINATES: protein motif:HMM:NF013828.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MACEKCMDTGWVETNGFVRKCICQRKVSKEVIKALNIPKRYEDVSLENFLLLSKEHKKALSIVKSYIELKAFQKGNGLMFVGPPGTGKTHLAVSIIKEIYTKYGIKGYFINTISMLFEVKKLYEERKSENSLLKEILEVPILVLDDLGNERLSEWSKDIIHYIISNRYNDMKPIIITSNSYINTQNDLPSLEERLSPSIISRIKSTCKLVKIKGTDIRSKGKEFLEKVKQLQKAKREAEEQ
SIO_010081: PERMA_RS10130
subclass of: SO_0000673
so part of: PERMA_RS10130
location: complement(6369..7094)
location: region:6369-7094:-1
so has part: feature:6369-7094:-1:exon

WP_012675150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6369-7094:-1:exon

PERMA_RS10135
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10135
old locus tag: PERMA_A0012
so part of: sequence
location: complement(7112..8011)
location: region:7112-8011:-1
so has part: feature:7112-8011:-1:exon
subclass of: SO_0000010

position:7112:-1
position: 7112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8011:-1
position: 8011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7112-8011:-1:exon

PERMA_RS10135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10135
old locus tag: PERMA_A0012
inference: COORDINATES: protein motif:HMM:NF012798.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MIVLNENLKDKINSYLNKLKKSGLSDKSIETYKNLLNHFEIWAEDYGLLLDNLVLMETDIEKFIDYLKSKNLSPTTIKMVLNRTKELVEFAGGKWLADKRIYRKRSQTESAKPYSELELKQIFNHLKITNKVYYYLTLTLYGFGLRVSEAVQLLPDDIIEKENQIFVRVRPEISKFNKSREAPLILKGEYRDDFIDFIVKRKHPKLKDKTLFTYYNDVQKKIITLDRHNVKSYFHLLSKDLGINITAHRFRDTYISYMVAKGIKPITVSKWVGHKDVNTTLKYYTKLTTKDELEELQKI
SIO_010081: PERMA_RS10135
subclass of: SO_0000673
so part of: PERMA_RS10135
location: complement(7112..8011)
location: region:7112-8011:-1
so has part: feature:7112-8011:-1:exon

WP_012675133.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7112-8011:-1:exon

PERMA_RS10140
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10140
old locus tag: PERMA_A0013
so part of: sequence
location: complement(8008..8484)
location: region:8008-8484:-1
so has part: feature:8008-8484:-1:exon
subclass of: SO_0000010

position:8008:-1
position: 8008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8484:-1
position: 8484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8008-8484:-1:exon

PERMA_RS10140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10140
old locus tag: PERMA_A0013
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRKYIEYIIFSFLLKGKKAYFILYSINVVFFILGLSYYFMHKEGLNMETLKKIFLSQFTITFLTYYPFIYVIFAYIEDGKENAELEIKEEILKIKDKHPYYKNDKTYQNLRELQKFRKELIGFSFIARIVAYSGIVILVMMIGLSMYANFYLLKEIK
SIO_010081: PERMA_RS10140
subclass of: SO_0000673
so part of: PERMA_RS10140
location: complement(8008..8484)
location: region:8008-8484:-1
so has part: feature:8008-8484:-1:exon

WP_012675143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8008-8484:-1:exon

PERMA_RS10145
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10145
old locus tag: PERMA_A0014
so part of: sequence
location: complement(8497..9612)
location: region:8497-9612:-1
so has part: feature:8497-9612:-1:exon
subclass of: SO_0000010

position:8497:-1
position: 8497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9612:-1
position: 9612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8497-9612:-1:exon

PERMA_RS10145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10145
old locus tag: PERMA_A0014
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIEKVKQSLLYVKLKKKLKGTTFYKNLTKATWDEYKQFELGIYEKLSQNPYSIINTLKKYFTKDTFGEIYQENLNYIENAIKLKIADYEEFERAMNFLIVSYALDILLVKSIEEYGNQVFFIKEEFWRLLNQTDFPENIEAKFISPPYNAFVIKLENYPKREEELKLTEMFVKFEEIKDKNLLYISIIYEHSNGKMFNKLPIQIYHSREDTLEKIKKEIDKNIENFLNATNAKGDIALQTAITIKSLSRIIINFLLYLNHINDDTSSIETAPEKLIKRKEFYEKQNNRKKLEKINKEISRYTKIHIVGTKTAQYYYSELEKAGKPKKPHWRRGHIRFLKHPKYKKDWTYVRPALIGKGKIDKDKERIYTT
SIO_010081: PERMA_RS10145
subclass of: SO_0000673
so part of: PERMA_RS10145
location: complement(8497..9612)
location: region:8497-9612:-1
so has part: feature:8497-9612:-1:exon

WP_012675134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8497-9612:-1:exon

PERMA_RS10150
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10150
old locus tag: PERMA_A0015
so part of: sequence
location: complement(9609..9824)
location: region:9609-9824:-1
so has part: feature:9609-9824:-1:exon
subclass of: SO_0000010

position:9609:-1
position: 9609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9824:-1
position: 9824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9609-9824:-1:exon

PERMA_RS10150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10150
old locus tag: PERMA_A0015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKSLLIDIISIGNRAVRKAQQESLKKGIPNVYCKNGKFYFELPDGTITTEVPDIYKNVFKRFKKENASKK
SIO_010081: PERMA_RS10150
subclass of: SO_0000673
so part of: PERMA_RS10150
location: complement(9609..9824)
location: region:9609-9824:-1
so has part: feature:9609-9824:-1:exon

WP_012675199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9609-9824:-1:exon

PERMA_RS10155
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10155
old locus tag: PERMA_A0016
so part of: sequence
location: complement(9817..10356)
location: region:9817-10356:-1
so has part: feature:9817-10356:-1:exon
subclass of: SO_0000010

position:9817:-1
position: 9817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10356:-1
position: 10356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9817-10356:-1:exon

PERMA_RS10155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10155
old locus tag: PERMA_A0016
inference: COORDINATES: protein motif:HMM:NF025052.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MEKTLFIVAGANGSGKTTFAKVFCKENNLEFLNTDEIAKHCKSNIEAGRKFLKAVKKKLNQNSSFVIETTLSGKYIKQLIKEAKQKGFKVKLIYIFLSNPEENVLRVEHRTAQGGHFVPEEDIKRRYYRSKKMFMEIKDLVHEWSLIFNGKDDFILVADDEKICIPELYEIFLEDIENG
SIO_010081: PERMA_RS10155
subclass of: SO_0000673
so part of: PERMA_RS10155
location: complement(9817..10356)
location: region:9817-10356:-1
so has part: feature:9817-10356:-1:exon

WP_012675138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9817-10356:-1:exon

PERMA_RS10160
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10160
old locus tag: PERMA_A0017
so part of: sequence
location: complement(10457..10873)
location: region:10457-10873:-1
so has part: feature:10457-10873:-1:exon
subclass of: SO_0000010

position:10457:-1
position: 10457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10873:-1
position: 10873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10457-10873:-1:exon

PERMA_RS10160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10160
old locus tag: PERMA_A0017
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKLTKKKVKEIVNRYCKNKNLIWEFKLQKFLDDLSSKEKSGDIIRVIKYALDNYQGMASVVNTPFFISDTEFTGKPNEMLFLNAIRHNSIAVINRNPYIKTLLRNNKNWKDFVRIMTATELEARKQVKSTLSDVYTD
SIO_010081: PERMA_RS10160
subclass of: SO_0000673
so part of: PERMA_RS10160
location: complement(10457..10873)
location: region:10457-10873:-1
so has part: feature:10457-10873:-1:exon

WP_012675139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10457-10873:-1:exon

PERMA_RS10165
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10165
old locus tag: PERMA_A0018
so part of: sequence
location: complement(10885..11199)
location: region:10885-11199:-1
so has part: feature:10885-11199:-1:exon
subclass of: SO_0000010

position:10885:-1
position: 10885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11199:-1
position: 11199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10885-11199:-1:exon

PERMA_RS10165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10165
old locus tag: PERMA_A0018
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKIDLKKAIVPNWLEKEEIEEHFGIKLTDEEFEELKTAVEEKLTDDFSFYLHQEVEKWIEENMAEPDPEVEYDRQLAQQELYDMDKDAFDPSWQDYDFEYDIP
SIO_010081: PERMA_RS10165
subclass of: SO_0000673
so part of: PERMA_RS10165
location: complement(10885..11199)
location: region:10885-11199:-1
so has part: feature:10885-11199:-1:exon

WP_012675145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10885-11199:-1:exon

PERMA_RS10170
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: traN
locus tag: PERMA_RS10170
old locus tag: PERMA_A0019
so part of: sequence
location: complement(11386..13944)
location: region:11386-13944:-1
so has part: feature:11386-13944:-1:exon
subclass of: SO_0000010

position:11386:-1
position: 11386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13944:-1
position: 13944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11386-13944:-1:exon

PERMA_RS10170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: traN
locus tag: PERMA_RS10170
old locus tag: PERMA_A0019
inference: COORDINATES: protein motif:HMM:NF018666.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraN
translation: MHRSKSVIILQLIAFISFSFAAVITESTKTTCPADPTFGGKCHLKEVRNDGPSCKTINGVEVCRNWWKKEYVYECEGQDNSALFSTFENQSYCRLVSRCKTWEDVSLKGGNVSCRIYIDKNRPGCETNPNRAECVADDCGDIKNKCTFLEYIPFGNIPDKANTTSQYTCDAYGTTCGYVQVPTSSGINLGTYVYECPSDVRKVCREYEQVLKCPAECPDGTKVDCPDNSNQATCPDGSIATCKTETCNTTKTCIQYETVNVQGTEIKTCLAPRSYTEYKVEAGSQQAQDLANNPSCIKVSDDITPCPYSTRTYGNTTICELAGRHSNIGGSSGQVFIGRNIQVPDGTDLVVYIYTGNSCDDDNTRVDAFIKDSRTGQIIGEKHTSCSINGQVFTLYRNTRNLTIDYKLKIVHCIGSGCGSNDYNFSDTETSTSWNYGGSTWDSHDSSLGWKVYHWETYRCYTDTIDTSSCSSFSSNCTLQDNLNDLSSLACNKFAIDINNSNKNVCSEFAIQYECPATITKQQCVKYETKSVCNGVSYPVRSVEVENKDFSNEFNKAMALAQLANELKHVWAGKYMRCDSGWFSSVFENPMDYFKQKMVSFIVMQLGAQFLSAATTFVQDYLGSCLSPAVAGVDFATTGDATAVSQESVADCMGSAAGQAWADAGDNSMMQSMLEKMGLNSGAASFLASPYGQLAISVAIDIFTQTNKCNACTSKSCAEAHGFYNTYGLIKGGNCHYVESGCAWKVKYGIGSVCLRKKYMYCCYDSVFARILVEQAYKQLGYSFAGGNCSALTFDDIKNLDFSSMDFTELQNYLEAKMKGQIDPNLIKNKINSYFDSDYGTQTFTGETPYSN
SIO_010081: PERMA_RS10170
subclass of: SO_0000673
so part of: PERMA_RS10170
location: complement(11386..13944)
location: region:11386-13944:-1
so has part: feature:11386-13944:-1:exon

WP_012675149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11386-13944:-1:exon

PERMA_RS10175
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10175
old locus tag: PERMA_A0020
so part of: sequence
location: complement(13923..14813)
location: region:13923-14813:-1
so has part: feature:13923-14813:-1:exon
subclass of: SO_0000010

position:13923:-1
position: 13923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14813:-1
position: 14813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13923-14813:-1:exon

PERMA_RS10175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10175
old locus tag: PERMA_A0020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRILVSAKHSLYKIGILGFIAFILGGCIGGGDTYKSKICSYNCNNDCQYYLEVSNDKKKVRYSWVCYGSGNTNWVDLQLGGTGSLNNSPKFEISNKQFRIYYGNKWGNWANLCGSDTSYVKYTYGSNVYEVKVEVNNGLARLCYKDNWSTTSWACGKWVAFDKAYAGCVSCPSGYTYNPTTKLCEADPIIDYTCPYAGGTCVEQSRGIAYCSPYNCNSTNIGTWCATGNIDTTNMTTNSIGMWQCSYDSSWFTDETACKTGCNYFKCSYNNNWYQGDKSVCELNCREQGQCTEVNQ
SIO_010081: PERMA_RS10175
subclass of: SO_0000673
so part of: PERMA_RS10175
location: complement(13923..14813)
location: region:13923-14813:-1
so has part: feature:13923-14813:-1:exon

WP_012675142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13923-14813:-1:exon

PERMA_RS10180
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10180
old locus tag: PERMA_A0021
so part of: sequence
location: complement(14776..15339)
location: region:14776-15339:-1
so has part: feature:14776-15339:-1:exon
subclass of: SO_0000010

position:14776:-1
position: 14776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15339:-1
position: 15339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14776-15339:-1:exon

PERMA_RS10180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10180
old locus tag: PERMA_A0021
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERIIVLILLTAGLALAFDYNKLKNGNVDQQGIRDFGNQQKNTYLNDPSKFKSSIGNKLGYDESKVNGNISDIQSPDAKQKLIEIMSNMTSGSKSIYKCYEERIVKVQNLFKCSLNGEVFNDNTLCNNNCFKQHDCIQSSCIQTAQCERLTAGFVCPIQKTQCQTSISCPSGGTYNANTGKCEAQPL
SIO_010081: PERMA_RS10180
subclass of: SO_0000673
so part of: PERMA_RS10180
location: complement(14776..15339)
location: region:14776-15339:-1
so has part: feature:14776-15339:-1:exon

WP_012675151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14776-15339:-1:exon

PERMA_RS10185
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10185
old locus tag: PERMA_A0022
so part of: sequence
location: complement(15327..16043)
location: region:15327-16043:-1
so has part: feature:15327-16043:-1:exon
subclass of: SO_0000010

position:15327:-1
position: 15327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16043:-1
position: 16043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15327-16043:-1:exon

PERMA_RS10185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10185
old locus tag: PERMA_A0022
inference: COORDINATES: protein motif:HMM:NF021209.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system pilin assembly protein TrbC
translation: MLFRISISLIFGICVSAFALTDEEQKYVEENKTNIQEVEKNFKELTEKKQKVDEEMLMVKPENLKEVGKFKSLTENKADVSEYKKLGENVNLKLLENIYGKNWLDIRLKLEGKPEKKNLIFYLFSTSVPMQTVKNVFLASQKYENLEFYGVLRGISKKTWKYLNSLDEAMNNMTVKVNPLIFKAVDAEVVPAFVIAECPERPYGIIRSKSCKFKAVLYGDVSLDFAVEKFKEEGLWKE
SIO_010081: PERMA_RS10185
subclass of: SO_0000673
so part of: PERMA_RS10185
location: complement(15327..16043)
location: region:15327-16043:-1
so has part: feature:15327-16043:-1:exon

WP_012675183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15327-16043:-1:exon

PERMA_RS10190
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10190
old locus tag: PERMA_A0023
so part of: sequence
location: complement(16016..17008)
location: region:16016-17008:-1
so has part: feature:16016-17008:-1:exon
subclass of: SO_0000010

position:16016:-1
position: 16016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17008:-1
position: 17008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16016-17008:-1:exon

PERMA_RS10190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10190
old locus tag: PERMA_A0023
inference: COORDINATES: protein motif:HMM:NF018536.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraU family protein
translation: MIRKVLMTLISSFSISLAATPPCINPISTVDWSFFADTIEFKGTCVCSTSGAIKVGVKLQLAEPIAFIETPNKAWDFICFGSTRDKFSVQKKDGTNLGKKGAKTNAHYIKYPVFGVLNITFDNLCTMHDLEFDIIPTGLSEINPLLWDDELAMIAQPWKLLFANPIAQVLCLADCVSSSVVFPSNVDTFETVRNGLFYCAGCWGAIQPNTTTTRGKDSVVESALTAVKLIDLLHESLQLKVYKEVSGLGWASNFSSGFPIPSDVACQPKFFPVIVKSQYWLNLSYPVAWDAIPIGDFPPKWSWFKKYPSKEENIWTIWRIRNCCLGFQFP
SIO_010081: PERMA_RS10190
subclass of: SO_0000673
so part of: PERMA_RS10190
location: complement(16016..17008)
location: region:16016-17008:-1
so has part: feature:16016-17008:-1:exon

WP_041531182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16016-17008:-1:exon

PERMA_RS10195
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10195
old locus tag: PERMA_A0024
so part of: sequence
location: complement(16974..17585)
location: region:16974-17585:-1
so has part: feature:16974-17585:-1:exon
subclass of: SO_0000010

position:16974:-1
position: 16974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17585:-1
position: 17585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16974-17585:-1:exon

PERMA_RS10195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10195
old locus tag: PERMA_A0024
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKIISIFLSLGLIGFGYSLENLGTFGKVYQIEEEDIIEYIKKNAKPPKFSREYIQRKIHAAAQVDVNLPVNKRDNVRYEKIIYTVPNDIIIEGKLIAKKGTKINVLKEIKLHNTYVILADYMLPYFLDWNKKTNAVYLITQGNILDLQKKYPDLRIYAGFPKVLSSLKVKSIPSIVYQYQDKLVILEKGFPNDKKSVDDTNK
SIO_010081: PERMA_RS10195
subclass of: SO_0000673
so part of: PERMA_RS10195
location: complement(16974..17585)
location: region:16974-17585:-1
so has part: feature:16974-17585:-1:exon

WP_012675137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16974-17585:-1:exon

PERMA_RS10200
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10200
old locus tag: PERMA_A0025
so part of: sequence
location: 17722..17928
location: region:17722-17928:1
so has part: feature:17722-17928:1:exon
subclass of: SO_0000010

position:17722:1
position: 17722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17928:1
position: 17928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17722-17928:1:exon

PERMA_RS10200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10200
old locus tag: PERMA_A0025
inference: COORDINATES: protein motif:HMM:TIGR02384.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAKKKAVKKAVAGLGMEKETSISLRIDKQTKEEFKRTVEEMGLDMTSAIKLYIKKVIREKRIPFEVEG
SIO_010081: PERMA_RS10200
subclass of: SO_0000673
so part of: PERMA_RS10200
location: 17722..17928
location: region:17722-17928:1
so has part: feature:17722-17928:1:exon

WP_012675195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17722-17928:1:exon

PERMA_RS10205
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10205
old locus tag: PERMA_A0026
so part of: sequence
location: 17925..18545
location: region:17925-18545:1
so has part: feature:17925-18545:1:exon
subclass of: SO_0000010

position:17925:1
position: 17925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18545:1
position: 18545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17925-18545:1:exon

PERMA_RS10205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10205
old locus tag: PERMA_A0026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012991893.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKLILALVVAGLSTSCYMAAETTQRSVDAGRLTMKQTTMTAKGATAGAVAGAVANIMLVPIANSVEKANIRALAFYCEMENPADKKEYKNCVEWGQAHWNMAKQFNKHLYYGKCHNKFLGFSRGLLKCWDEAFDYAKIIGKDLEKAVYQLKYDYKYSHCMPWRIESEKPEELYQKHLECKKEAREEATEFVKDIKDEIDEYLAKR
SIO_010081: PERMA_RS10205
subclass of: SO_0000673
so part of: PERMA_RS10205
location: 17925..18545
location: region:17925-18545:1
so has part: feature:17925-18545:1:exon

WP_012675184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17925-18545:1:exon

PERMA_RS10210
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10210
old locus tag: PERMA_A0027
so part of: sequence
location: 18551..19297
location: region:18551-19297:1
so has part: feature:18551-19297:1:exon
subclass of: SO_0000010

position:18551:1
position: 18551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19297:1
position: 19297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18551-19297:1:exon

PERMA_RS10210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10210
old locus tag: PERMA_A0027
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFRQLVLGFVLLYLSILGLYAGLTSDQKSYFVIGSSVFLGFLAIAYLVADLKNYSKYTKGGVLRVSEGLGRGLIAVIGIALGIFIFIKGSGFPAFTAFVLLFTLSIAYVFTTPEPGIYKNGKYLGKVIKGNIKVSNNISLGESKALKTIGAMSILKNGEELAKIALTAEGMMELKPEKLKEIFPEIRGNIETFGSKSVFKIGDFTVEYDFAKGYTSSYYDEDKNTTLDDCTLSPNYTFCAGNIHKHH
SIO_010081: PERMA_RS10210
subclass of: SO_0000673
so part of: PERMA_RS10210
location: 18551..19297
location: region:18551-19297:1
so has part: feature:18551-19297:1:exon

WP_012675156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18551-19297:1:exon

PERMA_RS10215
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10215
old locus tag: PERMA_A0028
so part of: sequence
location: complement(19300..19581)
location: region:19300-19581:-1
so has part: feature:19300-19581:-1:exon
subclass of: SO_0000010

position:19300:-1
position: 19300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19581:-1
position: 19581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19300-19581:-1:exon

PERMA_RS10215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10215
old locus tag: PERMA_A0028
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012991895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIIIEHDDHFEIGFEEFTPQNEINFSIAPLGEDYRILIFDDKQITVPYQFIKELYKKPLIKLFTYVKLEENGMIVGHPIADIEVDRNAVWKVL
SIO_010081: PERMA_RS10215
subclass of: SO_0000673
so part of: PERMA_RS10215
location: complement(19300..19581)
location: region:19300-19581:-1
so has part: feature:19300-19581:-1:exon

WP_012675146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19300-19581:-1:exon

PERMA_RS10220
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10220
old locus tag: PERMA_A0029
so part of: sequence
location: complement(19578..19877)
location: region:19578-19877:-1
so has part: feature:19578-19877:-1:exon
subclass of: SO_0000010

position:19578:-1
position: 19578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19877:-1
position: 19877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19578-19877:-1:exon

PERMA_RS10220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10220
old locus tag: PERMA_A0029
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDLKSEVIILSDRVILNIITENPYELLEKMKSFFEANGNIFPLSDRTLIITENQGIELDRKVFKTLFQIPMLTITLSDGNVGAEFATIKVNPEEVFNLI
SIO_010081: PERMA_RS10220
subclass of: SO_0000673
so part of: PERMA_RS10220
location: complement(19578..19877)
location: region:19578-19877:-1
so has part: feature:19578-19877:-1:exon

WP_012675155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19578-19877:-1:exon

PERMA_RS10225
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10225
old locus tag: PERMA_A0030
so part of: sequence
location: complement(19879..20268)
location: region:19879-20268:-1
so has part: feature:19879-20268:-1:exon
subclass of: SO_0000010

position:19879:-1
position: 19879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20268:-1
position: 20268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19879-20268:-1:exon

PERMA_RS10225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10225
old locus tag: PERMA_A0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012991897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTITFILLTFLSLAISQELVVGNCAENIITNKYGKFAQRFCDAYLNDKRVGMLKIEEHINPPFYGMVGGYLEIGNKVYKANYFTGKYFAIYEPYGNGLKIKTMCGVIYSQTDNLNEVWKAILNCIKEQ
SIO_010081: PERMA_RS10225
subclass of: SO_0000673
so part of: PERMA_RS10225
location: complement(19879..20268)
location: region:19879-20268:-1
so has part: feature:19879-20268:-1:exon

WP_012675136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19879-20268:-1:exon

PERMA_RS10230
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10230
old locus tag: PERMA_A0031
so part of: sequence
location: complement(20265..23756)
location: region:20265-23756:-1
so has part: feature:20265-23756:-1:exon
subclass of: SO_0000010

position:20265:-1
position: 20265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23756:-1
position: 23756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20265-23756:-1:exon

PERMA_RS10230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10230
old locus tag: PERMA_A0031
inference: COORDINATES: protein motif:HMM:NF019530.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraG N-terminal domain-containing protein
translation: MAIDLDLYTVGNIETLSQVYKYLVLILGDSFIGTVIKITAVWGLIFAILASAFKGRFSIWIYHFLMTYVLFQIFFMPVVRLTIIDTKLDRTYVVDNVPFGVGFIASMASGFSYKLTNLIDNAFHTGTVVVWGPGTGSYVAGVDYSRMGFAGMFDYLKMGLKIDPRLVQTKFNAVYEMQAYIEQCFFPYVSTLSATEIDNLRKSNNLLADLRVDNSFLMSYNGTTWTCDDFYDNKLVPDWNDFVNTGATTPQLFGFADYMTVRMVDSINAMTNASMSFNQIITQSGIINMIKESYFTSGLADDMNNRLLAGYAVGRAEEQAKLMGKAMFLWAKKVIPFMQGFLEAFFVILFPFLIILLFIPLVSFGGVQPAIGYLKVIVWVYLFIPILAIIDGMIKLQAINKTIAWLNSVGLQGITLGDYGFLLEQADFYPAIAGFAAMSTPLWAWMLLKGFEAGVHGISALVGSMGSQFVGQEAGAANITRNMTRDSRELMANMGAGQSPVEALSNAGTWMYKENTNLGGLYSSLGAYNAHSILESQLGIGGAVQTTTAQALYGLTHSGGRGMAAWNASGGNVMNMLNTGAMTSPAQIIERDYGTLGLKYDAQGNLVAAEFNTGIKSDMMQANLQTTFSQSRNDVISTAWNAVWGNSQTYQKAYQSTSAITEQFLKDYTSGTGIEDRASFDNRAEVKEAFTDAKELRDTLTEEYGLSKDKANQFVAEFTTGLSAAAAKNGGKLDINTVKDVFKSVLSKFKADGSVGAKGIENFEETEAWKEATQYADNKSYQIVQDTALSYTTSHNAYFNRVKQEKGAELQDVSYQDLQQFHENWQKAEQITAQINRAFNQTQTELGSLNTNNLIGFIRWMNGGHIDKQKETMMMDRILTAVANNDKPFLDNLSKAYTAYVMEMQGMTDVSPGVSKFFTQKQAFLNMVQGQVDNAAVNIATHFNQHYEGINTLRNMAGVSPYQNLQAEAGDRFAYVGSNQASIENGVYAGKGNIKPISKPQWTGEVEQYTKDPTNPIELGKNIVNYGKEHGAWGTAMAVGTGSVILGTAMEYAPWAKQAFDTMKSGASKVWTTIRTAEPIAEMGTGRWAQFAAGGRLLTIPVGTTAGVAMAATTVPLAAVGGWAIGTAINNKWGDDIYNNFTEPVLDWIGEKTGWWKPVGGNK
SIO_010081: PERMA_RS10230
subclass of: SO_0000673
so part of: PERMA_RS10230
location: complement(20265..23756)
location: region:20265-23756:-1
so has part: feature:20265-23756:-1:exon

WP_012675185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20265-23756:-1:exon

PERMA_RS10235
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10235
old locus tag: PERMA_A0032
so part of: sequence
location: complement(23761..25164)
location: region:23761-25164:-1
so has part: feature:23761-25164:-1:exon
subclass of: SO_0000010

position:23761:-1
position: 23761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25164:-1
position: 25164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23761-25164:-1:exon

PERMA_RS10235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10235
old locus tag: PERMA_A0032
inference: COORDINATES: protein motif:HMM:NF017892.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraH
translation: MKKLIASLAFASLLIAPTKADINATLDKIVGSSYYLPPGEIKSPTTNTYTLGSYSFRLRNDLLNRPVLSLRPPQATFSCSGADFDAGMLSMLNLNTFGDMLSQAGTSVAWGIMIGLVYSLPGIGDAFQKLNEWARMFQQLISNSCMIGTQIGKNLGSSIWESGRTNAQGKGVASGSVSSFEAAQKEFIDLIKTTGEIKKFFGTIPYGPLYEGGWTDTETADLVASLFGVLEWRAVDTAGNDCTDTSCLKNAKIKVVYYPPLTNNLQDIINGATMQIYHCNWGYDTNIGTFKCNGGVEVSNKDIPEGLRQKIVNRIDGIVDDIIDGTFMANPDDAQWIKSVPLPNFPEVINYLAILKKQGFTSQYNSALYGVSELISSMMLKVLIDNAYASLSSIGRYFTNKDMPKDLAGAQQNITKVKAQIDDYIQKNIQSNYITIQVASQTYRSIKSAVEKGFVDKFGQTAYLFMR
SIO_010081: PERMA_RS10235
subclass of: SO_0000673
so part of: PERMA_RS10235
location: complement(23761..25164)
location: region:23761-25164:-1
so has part: feature:23761-25164:-1:exon

WP_012675171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23761-25164:-1:exon

PERMA_RS10240
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10240
old locus tag: PERMA_A0033
so part of: sequence
location: complement(25166..26053)
location: region:25166-26053:-1
so has part: feature:25166-26053:-1:exon
subclass of: SO_0000010

position:25166:-1
position: 25166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26053:-1
position: 26053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25166-26053:-1:exon

PERMA_RS10240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10240
old locus tag: PERMA_A0033
inference: COORDINATES: protein motif:HMM:NF025105.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraF
translation: MRVLLLVCFLIGSALAFDKPDKGWFFYEDPEKPKKETVKKVEKKIEKPKEKKKEKPKKVEKPKPKPQPQQVVKKKKEDKFVFPVRPDAPQPVKEFLLNPNRETAEKFLAWQYQYFQHLQKIGFALREAYLAKGPQVYPIRGYPESELASKLYFNDYRKHLIAKAIKRLKNRFGLIIFYSGKCKVCQQELPILLGLRQIYGITMRAVNVDGNMIDLPIKQVYNPQLAKQYGITRVPTVVAVLEKKDGTVKQSVVGVGLMTADTILSMITQFLILEGEIKGSELNFYFSRNVVNEVK
SIO_010081: PERMA_RS10240
subclass of: SO_0000673
so part of: PERMA_RS10240
location: complement(25166..26053)
location: region:25166-26053:-1
so has part: feature:25166-26053:-1:exon

WP_012675188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25166-26053:-1:exon

PERMA_RS10245
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10245
old locus tag: PERMA_A0034
so part of: sequence
location: complement(26100..26471)
location: region:26100-26471:-1
so has part: feature:26100-26471:-1:exon
subclass of: SO_0000010

position:26100:-1
position: 26100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26471:-1
position: 26471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26100-26471:-1:exon

PERMA_RS10245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10245
old locus tag: PERMA_A0034
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALKRLEIIDKAGNITAFIELKLEKEIIGNETLPKLTVNVNGKKATTTAVERFLALLEGAFFGLIGENNEVIETPEGYIVFFRGKDRYGIRVGNKSEREVVFLRKLAYRELYHWINMQLIASF
SIO_010081: PERMA_RS10245
subclass of: SO_0000673
so part of: PERMA_RS10245
location: complement(26100..26471)
location: region:26100-26471:-1
so has part: feature:26100-26471:-1:exon

WP_012675192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26100-26471:-1:exon

PERMA_RS10250
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10250
old locus tag: PERMA_A0035
so part of: sequence
location: complement(26443..27828)
location: region:26443-27828:-1
so has part: feature:26443-27828:-1:exon
subclass of: SO_0000010

position:26443:-1
position: 26443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27828:-1
position: 27828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26443-27828:-1:exon

PERMA_RS10250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10250
old locus tag: PERMA_A0035
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGAKKQSSKESENFFLGFLIVVILFAVILDWLTSAVDRSSLLDMYNLRNSLMKVLPEGQKFYDTGYMMAYNAYKASNQKLSTEEKANIIVDLVKNGGKNIKVSLDAKLQAFLAKYVFAFGVFYAVVHKSFWLIVFSLVLVLVLFVYRNRKSIEELFVLLKAKYFYNPFKDKDIDKVLSILLANPVPASILHHNPERFGLFEHSYSVAKKVVNELIKQQAPEEKQKEGFLAGLLHDIGKIRLYRYECKEPFYVPSPLDDENEKPKKKKKTCKWTSAGLNQEVVNKSTMTFLSEKFGIRIPKDKDIWELVKQKDMEATLEELKGADYPLDKFFEETIRKLNINDIFDTGKYDGWHRSDFPYVVVLAHAFNRSLVRTIKDKEPAIPLSEEPDRKGVHTIAYIIPKKLSNCIELNPDSDLGLWDVKVGEKTFKSVYFLKKDCIPQDLLERWGEVSYGIEKIGNN
SIO_010081: PERMA_RS10250
subclass of: SO_0000673
so part of: PERMA_RS10250
location: complement(26443..27828)
location: region:26443-27828:-1
so has part: feature:26443-27828:-1:exon

WP_012675189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26443-27828:-1:exon

PERMA_RS10255
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10255
old locus tag: PERMA_A0036
so part of: sequence
location: complement(27803..28165)
location: region:27803-28165:-1
so has part: feature:27803-28165:-1:exon
subclass of: SO_0000010

position:27803:-1
position: 27803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28165:-1
position: 28165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27803-28165:-1:exon

PERMA_RS10255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10255
old locus tag: PERMA_A0036
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEKNLMWIAIFVVAIGLIAKIIFDNYKQATEPIDVCYIDAPKIIEKLAVFYSLDMNKSLVSSDSMTREKADILMKRLRAVLNNPYRYHCKTIFMKGAVLSGGKDITKEVLKDVWGKEAK
SIO_010081: PERMA_RS10255
subclass of: SO_0000673
so part of: PERMA_RS10255
location: complement(27803..28165)
location: region:27803-28165:-1
so has part: feature:27803-28165:-1:exon

WP_012675174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27803-28165:-1:exon

PERMA_RS10260
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: traC
locus tag: PERMA_RS10260
old locus tag: PERMA_A0037
so part of: sequence
location: complement(28176..30956)
location: region:28176-30956:-1
so has part: feature:28176-30956:-1:exon
subclass of: SO_0000010

position:28176:-1
position: 28176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30956:-1
position: 30956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28176-30956:-1:exon

PERMA_RS10260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: traC
locus tag: PERMA_RS10260
old locus tag: PERMA_A0037
inference: COORDINATES: protein motif:HMM:TIGR02746.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein TraC
translation: MITKIKELFLGENLEKYGTERRIINALIRNRVRAADYISVLEEKDNIFLTKEGFGFAFYLTLPAFLGQRQEEAFETFLNHDYPDGTVINFMAFSSSNIKPFLDYWEQEHSAENVDIDNPGILKYIIKKRKEYLLNAVNNSFWEDVEAKPRIIYNIMSVHIPFESDNPDVVRIQFRRIRKLANRIREAIRAEGFGCDFANADMMLAIYKEILNPELQGAIKYQKGLDFNRQVLDRNTTLRLVGGLESDLEVANDEKKKYWRGFWFSQYPNEMTLWKFSNILFPYDDTNPSPIIPTDFFMCMQVKVEDIEKRQTKITAKAIQMQDQAEKSEFARWIPKIKRRGEYAKYIKEVIEDGKVPYSASMYLFISADNPEHLDDIASGAVQRFVSKKFKLAREIDASLFNVLMECLPLNQIKEREEFFINYSTLFDANIASLMPFQGTSLGSKRPITLYLDRKYSLWGFDPFHSDTNFNIVKIAASGGGKSFSENDFHVLNLSAGRKIRVIDIGWSYKPLCSLLGGEYIELDDERNPCFNPFTHIIEDEKGNIHEDELAVLIPFVGLLAGLDLNPEALISNEDNLMARYCSFIARAITNAYKSYGNKTGLKEVVEELQKLEDDTGDNIPQKLSQALYEFSHGHYARYFNGENNIHYSKDYVVLELEQIENKDPRLKQAILYSLILRIFREFFLAHLRKDYSRKFLVVDEAWSILRESKAGYFLETAARRFRKYGCSLVVITQKIEDLLASPATRAIYANSAHLMILKPSEQDIEDAKSEKRLPVSDFEKELILSLTTVPGKFSELIIRNSVLGTVVGRLIVDRYSYWTFTTNDAERRVRTELLEELKNYELVLETLAKRMPIGEILEKLGYITGEQKQLILWLQSNHPKYKGKLFGEIATELGFVSKEKVIEATEKQKNISLQLKQLVEAYKKK
SIO_010081: PERMA_RS10260
subclass of: SO_0000673
so part of: PERMA_RS10260
location: complement(28176..30956)
location: region:28176-30956:-1
so has part: feature:28176-30956:-1:exon

WP_012675200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28176-30956:-1:exon

PERMA_RS10265
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: traV
locus tag: PERMA_RS10265
old locus tag: PERMA_A0038
so part of: sequence
location: complement(30946..31461)
location: region:30946-31461:-1
so has part: feature:30946-31461:-1:exon
subclass of: SO_0000010

position:30946:-1
position: 30946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31461:-1
position: 31461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30946-31461:-1:exon

PERMA_RS10265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: traV
locus tag: PERMA_RS10265
old locus tag: PERMA_A0038
inference: COORDINATES: protein motif:HMM:TIGR02747.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system lipoprotein TraV
translation: MKRHVLALIFVVPFLTGCSSILGIGHENFRCEGTDKGGVCAPVDKVYKDRHLLGNQKDTVIDREKEKEISEEKEEGVFYEGCYGEVKISKDGKPKCNLKPKAEIKVRVIKEKPFAQPIRIQPKIAKIWIQPYVDENGNLVDGRYIYVIVKKGGWLLPDGTKIYDDEVKDDN
SIO_010081: PERMA_RS10265
subclass of: SO_0000673
so part of: PERMA_RS10265
location: complement(30946..31461)
location: region:30946-31461:-1
so has part: feature:30946-31461:-1:exon

WP_012675179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30946-31461:-1:exon

PERMA_RS10270
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10270
old locus tag: PERMA_A0039
so part of: sequence
location: complement(31458..32144)
location: region:31458-32144:-1
so has part: feature:31458-32144:-1:exon
subclass of: SO_0000010

position:31458:-1
position: 31458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32144:-1
position: 32144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31458-32144:-1:exon

PERMA_RS10270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10270
old locus tag: PERMA_A0039
inference: COORDINATES: protein motif:HMM:NF024498.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DsbC family protein
translation: MMMRMFLKNSILGLLACFSFSFAGVLEQTGAKIVEEKDLGDISQIVIQFPDGRKEVGYITKDNKYLIIGNVIDAKTGENITAKKYRELDKVDVSKVPLDEAVKLKFGKGTKKLIMVADPDCPFCKKAYQYLKNKDVEVYLFLFPLNIHPQAYDKSVKILCSKDPAKAYDKVESGNQLQVSKCKEGEDKLKRHILIANKLGVRGTPLFIDMQGHKINGLNIPELEEALK
SIO_010081: PERMA_RS10270
subclass of: SO_0000673
so part of: PERMA_RS10270
location: complement(31458..32144)
location: region:31458-32144:-1
so has part: feature:31458-32144:-1:exon

WP_041531183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31458-32144:-1:exon

PERMA_RS10275
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10275
old locus tag: PERMA_A0040
so part of: sequence
location: complement(32116..32490)
location: region:32116-32490:-1
so has part: feature:32116-32490:-1:exon
subclass of: SO_0000010

position:32116:-1
position: 32116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32490:-1
position: 32490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32116-32490:-1:exon

PERMA_RS10275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10275
old locus tag: PERMA_A0040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAWKKVEVKEEKHLDEVWVSFGKEPKGDVNAKVINEGESIEGYIEKITKSTKFKQPIVSLISGDVRYLMFAPKDLEKKIDSLIEEVDGKMVYTRITFTGIKELDEDRKAYTFEVEYDDENVLEE
SIO_010081: PERMA_RS10275
subclass of: SO_0000673
so part of: PERMA_RS10275
location: complement(32116..32490)
location: region:32116-32490:-1
so has part: feature:32116-32490:-1:exon

WP_012675140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32116-32490:-1:exon

PERMA_RS10280
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10280
old locus tag: PERMA_A0041
so part of: sequence
location: complement(32502..32894)
location: region:32502-32894:-1
so has part: feature:32502-32894:-1:exon
subclass of: SO_0000010

position:32502:-1
position: 32502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32894:-1
position: 32894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32502-32894:-1:exon

PERMA_RS10280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10280
old locus tag: PERMA_A0041
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKLKIISLLAILLSSCAEYKSQEMVIDGEKKKVLVADNYFAKVEGIRPFEKQPKGEYDGLLFIVKPDTAFTTSGMENYLLICSLAKAKVGYKTVNCKCLEPDIDEYYPNSAYVYERLFSDKDCKNQIKL
SIO_010081: PERMA_RS10280
subclass of: SO_0000673
so part of: PERMA_RS10280
location: complement(32502..32894)
location: region:32502-32894:-1
so has part: feature:32502-32894:-1:exon

WP_012675182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32502-32894:-1:exon

PERMA_RS10620
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10620
old locus tag: PERMA_A0042
so part of: sequence
location: complement(32848..34098)
location: region:32848-34098:-1
so has part: feature:32848-34098:-1:exon
subclass of: SO_0000010

position:32848:-1
position: 32848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34098:-1
position: 34098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32848-34098:-1:exon

PERMA_RS10620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10620
old locus tag: PERMA_A0042
inference: COORDINATES: protein motif:HMM:NF015688.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraB/VirB10 family protein
translation: MEEKKNSQNVEEKEEIKEEVETIEDRLNKKRMVILGAITAGISLFVIFSFFSNVIFGLADNTSVPQYQPKKEGEKTIAPKVEEDWKAITEMKINQLQERLQRMEDTNKQILQLLQEQKQEREMLREEIEREIEERVKTTPSASVPPPPPQTPVQYGQPQGQQGQQGQQQKAPALKEFKPDKEEETDKKEVSKTEKKEKKAVKIKLPLGFLKGLTLTGLDAPTFQYGQNNPHPVLIVSLSKQIIANNKKLNLKECFFLGSGFGEISSERAYIRLVKLSCIDKKGNVLEQKVAGWVLDDDGKVGLRGRVVSKQGAVLAKTFMAGLLEGLSRTIAATSTTIQISPVGTTQTLNPQDATKVALASGFQSAASRLAQFYMKIAEQMYPVVEVSPGRKITILISGGSLEKTKDNKLISNPLK
SIO_010081: PERMA_RS10620
subclass of: SO_0000673
so part of: PERMA_RS10620
location: complement(32848..34098)
location: region:32848-34098:-1
so has part: feature:32848-34098:-1:exon

WP_012675148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32848-34098:-1:exon

PERMA_RS10290
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10290
old locus tag: PERMA_A0043
so part of: sequence
location: complement(34079..34552)
location: region:34079-34552:-1
so has part: feature:34079-34552:-1:exon
subclass of: SO_0000010

position:34079:-1
position: 34079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34552:-1
position: 34552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34079-34552:-1:exon

PERMA_RS10290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10290
old locus tag: PERMA_A0043
inference: COORDINATES: protein motif:HMM:NF019844.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SH3 domain-containing protein
translation: MRKLATAILGFGLFVSVNAETIIATGTLSIEDMKRMIIKLKQENELQSAKIRYLENKVAKLEKQLAGKITRANSSMMEGLKAGELMAKRINIKTYCTTANLNVRKGPGMNYEVFAWLKKGAVVSGTVKKGKWLKILNPNGWVSSKFLRECSYGREEK
SIO_010081: PERMA_RS10290
subclass of: SO_0000673
so part of: PERMA_RS10290
location: complement(34079..34552)
location: region:34079-34552:-1
so has part: feature:34079-34552:-1:exon

WP_012675163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34079-34552:-1:exon

PERMA_RS10295
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10295
old locus tag: PERMA_A0044
so part of: sequence
location: complement(34549..35307)
location: region:34549-35307:-1
so has part: feature:34549-35307:-1:exon
subclass of: SO_0000010

position:34549:-1
position: 34549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35307:-1
position: 35307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34549-35307:-1:exon

PERMA_RS10295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10295
old locus tag: PERMA_A0044
inference: COORDINATES: protein motif:HMM:NF018311.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type-F conjugative transfer system secretin TraK
translation: MRSLKVLILALFIVSFSFAKELVYEGKPLLLDVSNQVSNIIEFPEKVKKAISASQQLSAKIQGNKVIVLLPSKEPADLLVSTKSGKVYALLLNPKIIPTQIVKIVDKQIEEEKKKKAKKEKVKQIEKGKDYEEKLINILKAAINGQLDDYYEVKRKVQTLETQNYFIEITKEYQGDEFGVLLGKIYPKKKDAKPITERLLAQVLSRIWRIAGITILMEQNLMHFYAATREYFNEIPESYEDKIIKKYLRDEK
SIO_010081: PERMA_RS10295
subclass of: SO_0000673
so part of: PERMA_RS10295
location: complement(34549..35307)
location: region:34549-35307:-1
so has part: feature:34549-35307:-1:exon

WP_012675160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34549-35307:-1:exon

PERMA_RS10300
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: traE
locus tag: PERMA_RS10300
old locus tag: PERMA_A0045
so part of: sequence
location: complement(35294..35821)
location: region:35294-35821:-1
so has part: feature:35294-35821:-1:exon
subclass of: SO_0000010

position:35294:-1
position: 35294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35821:-1
position: 35821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35294-35821:-1:exon

PERMA_RS10300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: traE
locus tag: PERMA_RS10300
old locus tag: PERMA_A0045
inference: COORDINATES: protein motif:HMM:TIGR02761.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system protein TraE
translation: MKYIERWSELYRKNAILLFVVFLQAVLIVFLLTAVLYLAVKRTAVIAIPPTGTQIATGSETHRLLWGRYYIDLLMNFSKNDIDNRLNILFTFIQNPKARERLIREAEEIKKNDIVQVFIPYESTWKVQGGVVSVKGHIKRWIGTTLVRDEDVLVKVKLRPSGSIIALEDWKYEKP
SIO_010081: PERMA_RS10300
subclass of: SO_0000673
so part of: PERMA_RS10300
location: complement(35294..35821)
location: region:35294-35821:-1
so has part: feature:35294-35821:-1:exon

WP_012675173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35294-35821:-1:exon

PERMA_RS10305
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
gene: traL
locus tag: PERMA_RS10305
old locus tag: PERMA_A0046
so part of: sequence
location: complement(35844..36140)
location: region:35844-36140:-1
so has part: feature:35844-36140:-1:exon
subclass of: SO_0000010

position:35844:-1
position: 35844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36140:-1
position: 36140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35844-36140:-1:exon

PERMA_RS10305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
gene: traL
locus tag: PERMA_RS10305
old locus tag: PERMA_A0046
inference: COORDINATES: protein motif:HMM:TIGR02762.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV conjugative transfer system protein TraL
translation: MEGKAEGRKVYPIPKYIDDLPEVVFIPIDIFLISATAFMIAFVSFNPFIGAIVGPATGFAYYHFRKGKPRNFLHLIFYKTGLASVKGAVPPTEKEIKA
SIO_010081: PERMA_RS10305
subclass of: SO_0000673
so part of: PERMA_RS10305
location: complement(35844..36140)
location: region:35844-36140:-1
so has part: feature:35844-36140:-1:exon

WP_012675162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35844-36140:-1:exon

PERMA_RS10310
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10310
old locus tag: PERMA_A0047
so part of: sequence
location: complement(36165..36566)
location: region:36165-36566:-1
so has part: feature:36165-36566:-1:exon
subclass of: SO_0000010

position:36165:-1
position: 36165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36566:-1
position: 36566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36165-36566:-1:exon

PERMA_RS10310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10310
old locus tag: PERMA_A0047
inference: COORDINATES: protein motif:HMM:NF016820.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MKKQIIKIRDEVKGRLDTINEIAEIVAETSRISRSDAVKIGLGLFIASAPAMAQTTDPWGNFYTLTKNWIQGNLGKFIALLIFVIGLIIAAFSHSAKPIVYALILAVVIGGAVGLVGMFFNVGSSSFSTPSGW
SIO_010081: PERMA_RS10310
subclass of: SO_0000673
so part of: PERMA_RS10310
location: complement(36165..36566)
location: region:36165-36566:-1
so has part: feature:36165-36566:-1:exon

WP_012675191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36165-36566:-1:exon

PERMA_RS10315
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10315
old locus tag: PERMA_A0048
so part of: sequence
location: 36738..37430
location: region:36738-37430:1
so has part: feature:36738-37430:1:exon
subclass of: SO_0000010

position:36738:1
position: 36738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37430:1
position: 37430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36738-37430:1:exon

PERMA_RS10315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10315
old locus tag: PERMA_A0048
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARKPITFKHRDGNITFRINRSEVEIEGTTAFKKGSEEKQAFKGKIRVNPEAVFEAYKLTKQAVEGQEIENGKIVFFKNGFRRIPYFTIGKPANVSEGFIKRKGVFTLFAENQRENMASRFILTLNDLISLLGFLKQMPMRFKIGDVIFERRNGRFSMINPFYENIEDTDIERLKIALKQFLSGKEDIIPAYIGNEASLFKKDGKFILRTDSKDFEITEDVAKDFWTFLN
SIO_010081: PERMA_RS10315
subclass of: SO_0000673
so part of: PERMA_RS10315
location: 36738..37430
location: region:36738-37430:1
so has part: feature:36738-37430:1:exon

WP_012675132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36738-37430:1:exon

PERMA_RS10320
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10320
old locus tag: PERMA_A0049
so part of: sequence
location: complement(37513..38217)
location: region:37513-38217:-1
so has part: feature:37513-38217:-1:exon
subclass of: SO_0000010

position:37513:-1
position: 37513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38217:-1
position: 38217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37513-38217:-1:exon

PERMA_RS10320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10320
old locus tag: PERMA_A0049
inference: COORDINATES: protein motif:HMM:NF024117.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease family protein
translation: MVSVKELLKKALLEKSKEEQNKYQGMLRVSELSQCPVKAVWSFLGEEPQVDEEKLPILAIGSNLHEMLQGFLPVEEAEKEFVRKHGDYQIVGHIDGIMTDPETGEKFIVEFKTIADKVYRNGKTTKDYLPSSHHILQAHFYMRMTGLEKAKIVYLLKSSGEIVEFDVDYDPEVEQEMLKVLDEAVSILKGNKEVVDIYNEIQSGSENWKCKYCFYSHLCEKEKSEKVLDELEYM
SIO_010081: PERMA_RS10320
subclass of: SO_0000673
so part of: PERMA_RS10320
location: complement(37513..38217)
location: region:37513-38217:-1
so has part: feature:37513-38217:-1:exon

WP_012675186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37513-38217:-1:exon

PERMA_RS10325
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10325
old locus tag: PERMA_A0050
so part of: sequence
location: complement(38374..38772)
location: region:38374-38772:-1
so has part: feature:38374-38772:-1:exon
subclass of: SO_0000010

position:38374:-1
position: 38374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38772:-1
position: 38772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38374-38772:-1:exon

PERMA_RS10325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10325
old locus tag: PERMA_A0050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGVVLESTSLMEDVLLELNTGGICWDFQRAEEIINEAGLDYNRVVKEIAFQIKENQGWKVDPVGIVYEFIKEEAEVELESLQEVEVLANYRDTQFYLPSWKRDYVLDELKGIDVEFELSKATKFLLRELQII
SIO_010081: PERMA_RS10325
subclass of: SO_0000673
so part of: PERMA_RS10325
location: complement(38374..38772)
location: region:38374-38772:-1
so has part: feature:38374-38772:-1:exon

WP_012675172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38374-38772:-1:exon

PERMA_RS10330
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10330
old locus tag: PERMA_A0051
so part of: sequence
location: complement(38777..39106)
location: region:38777-39106:-1
so has part: feature:38777-39106:-1:exon
subclass of: SO_0000010

position:38777:-1
position: 38777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39106:-1
position: 39106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38777-39106:-1:exon

PERMA_RS10330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10330
old locus tag: PERMA_A0051
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKNYQHLWRVERDANLIRKGVIALKLRYWNKEDDTTWQDKLVLNYKADGKFLKWLEWALCYVLYFYPEYRNAVMSKIQNKEVMEKLITAYQKEDEDLEEFLRELSKEV
SIO_010081: PERMA_RS10330
subclass of: SO_0000673
so part of: PERMA_RS10330
location: complement(38777..39106)
location: region:38777-39106:-1
so has part: feature:38777-39106:-1:exon

WP_012675175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38777-39106:-1:exon

PERMA_RS10335
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10335
old locus tag: PERMA_A0052
so part of: sequence
location: complement(39148..39993)
location: region:39148-39993:-1
so has part: feature:39148-39993:-1:exon
subclass of: SO_0000010

position:39148:-1
position: 39148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39993:-1
position: 39993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39148-39993:-1:exon

PERMA_RS10335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10335
old locus tag: PERMA_A0052
inference: COORDINATES: protein motif:HMM:NF019997.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MGKKVSEIVKTKVLELFDKIESQDWETPYLYPKNFISKHEYRGINRLLLSGSPYWLTNNQLKELYKKKGWRLKKGSKASIAVFFKPQQIEVIEKDEEGNEIIITKDVPILKYYYLFPILDVVDENGNPVYEPVKETNRTKELLSTLRNYCQIEGIRIIETAQFEASFYSQDKDVIGMYPHIKDDIDYVMTFAHEAVHSTKHEKRLNRKVDKQMEEAIAEIGSLLLTARYINIPEDKFKNSVIYIKGWLQEVSGAKLIKAFNQAEKASEYIISRANLNQKVA
SIO_010081: PERMA_RS10335
subclass of: SO_0000673
so part of: PERMA_RS10335
location: complement(39148..39993)
location: region:39148-39993:-1
so has part: feature:39148-39993:-1:exon

WP_012675180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39148-39993:-1:exon

PERMA_RS10340
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10340
old locus tag: PERMA_A0053
so part of: sequence
location: complement(40084..40929)
location: region:40084-40929:-1
so has part: feature:40084-40929:-1:exon
subclass of: SO_0000010

position:40084:-1
position: 40084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40929:-1
position: 40929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40084-40929:-1:exon

PERMA_RS10340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10340
old locus tag: PERMA_A0053
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MARRKSKKNEEIKETKKSKKEEKVMEEKNQEVLEPEVELVETTAEEVLGEEPETKPAPAVKEEVSIAPANEFSFDTLRERLSSVLKENVNACVKINGRLEITRPVALAMLNQLSRSIAGLGGTVRIKKDVLSVNPIIVKAICEIQLPNGAMLEFQALGNAEEDDIRGNRDKEIRIYHDALGTAETRATKRLLEEVVGEDFINKVLVPLMEKMGHVSNGNGKKSNGDKPATQKQKDLIQKLIDEGKIKDKVDLDKLTMAQASQLLDKVFKKSNNTKTVASSK
SIO_010081: PERMA_RS10340
subclass of: SO_0000673
so part of: PERMA_RS10340
location: complement(40084..40929)
location: region:40084-40929:-1
so has part: feature:40084-40929:-1:exon

WP_012675131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40084-40929:-1:exon

PERMA_RS10940
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10940
old locus tag: PERMA_A0055
so part of: sequence
location: complement(41112..41246)
location: region:41112-41246:-1
so has part: feature:41112-41246:-1:exon
subclass of: SO_0000010

position:41112:-1
position: 41112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41246:-1
position: 41246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41112-41246:-1:exon

PERMA_RS10940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10940
old locus tag: PERMA_A0055
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKALSFVAITTGVIVYLLFSAVMDYANDLKDYQEKRIEQVLSK
SIO_010081: PERMA_RS10940
subclass of: SO_0000673
so part of: PERMA_RS10940
location: complement(41112..41246)
location: region:41112-41246:-1
so has part: feature:41112-41246:-1:exon

WP_012675181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41112-41246:-1:exon

PERMA_RS10345
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10345
old locus tag: PERMA_A0056
so part of: sequence
location: complement(41283..41594)
location: region:41283-41594:-1
so has part: feature:41283-41594:-1:exon
subclass of: SO_0000010

position:41283:-1
position: 41283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41594:-1
position: 41594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41283-41594:-1:exon

PERMA_RS10345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10345
old locus tag: PERMA_A0056
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSKSNQNHQSQYKHYHHPYFPELEVLEDASGNKSYYISVDNLPEVPKKIFQTIETLKELQQSQFLSYSFKSMLKSEIQILEQKLNYELVKHGYPYDTNVIPF
SIO_010081: PERMA_RS10345
subclass of: SO_0000673
so part of: PERMA_RS10345
location: complement(41283..41594)
location: region:41283-41594:-1
so has part: feature:41283-41594:-1:exon

WP_012675176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41283-41594:-1:exon

PERMA_RS10350
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10350
old locus tag: PERMA_A0057
so part of: sequence
location: complement(42112..42429)
location: region:42112-42429:-1
so has part: feature:42112-42429:-1:exon
subclass of: SO_0000010

position:42112:-1
position: 42112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42429:-1
position: 42429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42112-42429:-1:exon

PERMA_RS10350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10350
old locus tag: PERMA_A0057
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRYILSCLAIFSIATASELGITEKDCDRLMAQLKGCVIDLYHKKGIPVDEAIRTCGQIQAKGLCEQKGIDFGKCVGVYSMEMANSCADNLMKVKLELKEQLYRN
SIO_010081: PERMA_RS10350
subclass of: SO_0000673
so part of: PERMA_RS10350
location: complement(42112..42429)
location: region:42112-42429:-1
so has part: feature:42112-42429:-1:exon

WP_012675154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42112-42429:-1:exon

PERMA_RS10355
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10355
old locus tag: PERMA_A0058
so part of: sequence
location: complement(42449..42712)
location: region:42449-42712:-1
so has part: feature:42449-42712:-1:exon
subclass of: SO_0000010

position:42449:-1
position: 42449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42712:-1
position: 42712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42449-42712:-1:exon

PERMA_RS10355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10355
old locus tag: PERMA_A0058
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFRGGKKLKKILVANLVGKKRDLKSGKVFYVYEVIFDDYSQDRLFSEKALYDDDYVVLKENEVLEVVNSKEDSKLKILALKFWFLFL
SIO_010081: PERMA_RS10355
subclass of: SO_0000673
so part of: PERMA_RS10355
location: complement(42449..42712)
location: region:42449-42712:-1
so has part: feature:42449-42712:-1:exon

WP_148206469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42449-42712:-1:exon

PERMA_RS10360
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10360
old locus tag: PERMA_A0059
so part of: sequence
location: complement(42715..45219)
location: region:42715-45219:-1
so has part: feature:42715-45219:-1:exon
subclass of: SO_0000010

position:42715:-1
position: 42715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45219:-1
position: 45219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42715-45219:-1:exon

PERMA_RS10360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10360
old locus tag: PERMA_A0059
inference: COORDINATES: protein motif:HMM:NF013311.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]
GO process: GO:0006265 - DNA topological change [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IA DNA topoisomerase
translation: MKLIIAEKPSVAIDTAKAISPKFQKKDGYIEAGEYTITWAVGHLLEIDDTIAPKEWKLETLPILPEKFEYKVSKGKNKQFNIVKSLVKKADEIFVNTDAGREGELIARLILLYSGWNGWDKTYRFWTSEALTKNVILRELKARKPAKNWDSLFYSGLARQQSDWLVGINLTRALTVIVGDGSVWSIGRVQTPVLKLIVERDLEIKNFKPKPYWQLEAVFEKDSQKFKAKLLNEKDTIFEDKNKIWEIFKALKDKDKAVVKEIEKKQHKKYAPPLFSITTLQMTANKRFGFTAQKTLMLAQDLYEAKYISYPRTEAQHLDENPSTKDLVKNILKKLGEEQLIENVDKVGKRVFDSSKLTDHYAIIPMNLLTEEKAKKEGLNQDHLKIYELIKNRFLAVFMPPYEYETTKAILDIDGYQFTASGKVELSLGWKAIDREDEDDKIEAPLPQLEKGDMVHKISQRVIEDKTKPPAHYTESTLLNKMKQLELGTGATRAGIIQTLKDRFYIKNKGKSLIATEKGFALIEKIKDKEFASPKMTSKWEQQLEQIYTQKLGKKGYEDFLNQIKEFTKKEVEAVKGISIQMEQKPVGRCRCGGDVFEYGKYYQCGSCNLKVWKEVFSKKLKEKEALLLYQGTTVYVEGLKGKSGKKFGAGLKLTDEGKIELVFDESQIDTLAKCKCGGVIVEADKSYYCKSCKAVVWKEISGKKISKNIALKLFKGEKVKVKGFKSKAGKNFEAILCLENGKPKMEFPENEPIGKCSCGGEIFEYSNRYVCKSCNQVVWKEFFGKKLSKREAVGLLNGRTIPISNLKSKSGRKFDANVALVDGKVKIVSFENG
SIO_010081: PERMA_RS10360
subclass of: SO_0000673
so part of: PERMA_RS10360
location: complement(42715..45219)
location: region:42715-45219:-1
so has part: feature:42715-45219:-1:exon

WP_012675178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42715-45219:-1:exon

PERMA_RS10365
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10365
old locus tag: PERMA_A0060
so part of: sequence
location: complement(45315..46865)
location: region:45315-46865:-1
so has part: feature:45315-46865:-1:exon
subclass of: SO_0000010

position:45315:-1
position: 45315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46865:-1
position: 46865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45315-46865:-1:exon

PERMA_RS10365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10365
old locus tag: PERMA_A0060
inference: COORDINATES: protein motif:HMM:NF013235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MGENNREIKQFRGEIVKKDNLLNEGIHTIDTAEKYKLMLLMIAQIATQDEKPTSPEEIANRTYSFNVEDYINLKQVKDKYFMEDYVMDMAEYLRDNSAITITEFDDEGRLTRYRTIWIFEDVDFKKTTNGWKVVYKFTYSISSFLFELRNKFIAYHLKNIMPMRSKYSIRLYELLKQYEKIGERTFDIDEFREKIGTRVFVIDKKTKKKKLLSDDYKDFLDLRRRVIEKAVEEVNKYTDIEITDVEYHRKGRRIGFITFYFKPKINFDFEKIEEIKEKVEADKNEVLQQSKELPVAMEITWANIGQLRKHYKDKVEEIIRYIKELQTAKSLGNMKKGAVINTLTENEILFLLINADKDIYDDDMVVSIIKKALTNKKLKNPMGFLVDQLNINMKTAKFKELTLTAKKIDEELFKKKLEDMFIEGKPAIEFMKAYWNEKVKGKVSKEIAKLLREPLANAIYDELESVVYIPAPDEVYKDWLDTNFLEDIRQFLRDRFDVSDVVVEIVDFDEVKKNSN
SIO_010081: PERMA_RS10365
subclass of: SO_0000673
so part of: PERMA_RS10365
location: complement(45315..46865)
location: region:45315-46865:-1
so has part: feature:45315-46865:-1:exon

WP_012675159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45315-46865:-1:exon

PERMA_RS10370
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10370
old locus tag: PERMA_A0061
so part of: sequence
location: complement(47365..47637)
location: region:47365-47637:-1
so has part: feature:47365-47637:-1:exon
subclass of: SO_0000010

position:47365:-1
position: 47365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47637:-1
position: 47637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47365-47637:-1:exon

PERMA_RS10370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10370
old locus tag: PERMA_A0061
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNRYPKMVMSHREYYIRQFFKVITSKEFLNGVAEALGMFLAATMIFVLMAMVLIIFPDEPINKELNKQENQQTYPASHYPSQEPFKTQN
SIO_010081: PERMA_RS10370
subclass of: SO_0000673
so part of: PERMA_RS10370
location: complement(47365..47637)
location: region:47365-47637:-1
so has part: feature:47365-47637:-1:exon

WP_012675190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47365-47637:-1:exon

PERMA_RS10375
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10375
old locus tag: PERMA_A0062
so part of: sequence
location: 47718..48167
location: region:47718-48167:1
so has part: feature:47718-48167:1:exon
subclass of: SO_0000010

position:47718:1
position: 47718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48167:1
position: 48167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47718-48167:1:exon

PERMA_RS10375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10375
old locus tag: PERMA_A0062
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEVDELKQIIEKRNRDVVVIGRLLKKIKQEKSYKEKSFSEFLRNIGISTRTANYYIRISELENADKLVEEIGYTKLIVLMEAKKLNKETLEMAKEMSVSQLKRKLFETEQKKDISKVEKDIERLLKKYPVDDFKKALVNVIKKLKEEE
SIO_010081: PERMA_RS10375
subclass of: SO_0000673
so part of: PERMA_RS10375
location: 47718..48167
location: region:47718-48167:1
so has part: feature:47718-48167:1:exon

WP_012675193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47718-48167:1:exon

PERMA_RS10380
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10380
old locus tag: PERMA_A0063
so part of: sequence
location: 48169..49122
location: region:48169-49122:1
so has part: feature:48169-49122:1:exon
subclass of: SO_0000010

position:48169:1
position: 48169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49122:1
position: 49122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48169-49122:1:exon

PERMA_RS10380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10380
old locus tag: PERMA_A0063
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANLAITKDPSLHKWLKENKDKLLITSYGDAHLFQETVLIRGVKPFPLFETLVPLSFINIRKEEEAILKQLKECIKVEDELEKMFIASQVMNGSRRYGTSFSNYLDVVVSILDYFSDEGIEKATFRIRERWEGMTGDLLDRWFEVLDYQGSEIGVSTPYSFAFVRLSDVPLELQKMLREYNLYSDTKFIGIYEDYGEPQYTLVAVIQNNPLDLDNIPQLWNDNFEAVGREEESILEKFDKYLREFKFLDKDLLSLASEIRRLKYLNDLNILSILRLIKIRLKLQKEKENKFGELEKVLDFQVSKNKPPFFFDVEIIT
SIO_010081: PERMA_RS10380
subclass of: SO_0000673
so part of: PERMA_RS10380
location: 48169..49122
location: region:48169-49122:1
so has part: feature:48169-49122:1:exon

WP_012675196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48169-49122:1:exon

PERMA_RS10385
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10385
old locus tag: PERMA_A0064
so part of: sequence
location: 49141..49797
location: region:49141-49797:1
so has part: feature:49141-49797:1:exon
subclass of: SO_0000010

position:49141:1
position: 49141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49797:1
position: 49797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49141-49797:1:exon

PERMA_RS10385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10385
old locus tag: PERMA_A0064
inference: COORDINATES: protein motif:HMM:NF040299.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6011 domain-containing protein
translation: MVCGRCGRPLSNPKSIIAGIGPQCKKHIEFELQIKKIKMRCMHSFYCLPQVEHIVVLLQRAKKKFEKYNIPWSSEAEKAIIEGLGLDKPRIELTSEEKKRMLEYMRDAEDRDIAKAEFFRIIGKCPHGLNCTDPDTALEATYHLIGLVFKASDENYKVAENFLLIIDPLLSILELFGTSERNYYESFYKVMKKKAEILKRKHRKKKIAEELEDILNLL
SIO_010081: PERMA_RS10385
subclass of: SO_0000673
so part of: PERMA_RS10385
location: 49141..49797
location: region:49141-49797:1
so has part: feature:49141-49797:1:exon

WP_012675141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49141-49797:1:exon

PERMA_RS10390
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10390
old locus tag: PERMA_A0065
so part of: sequence
location: 49810..50340
location: region:49810-50340:1
so has part: feature:49810-50340:1:exon
subclass of: SO_0000010

position:49810:1
position: 49810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50340:1
position: 50340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49810-50340:1:exon

PERMA_RS10390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10390
old locus tag: PERMA_A0065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKIKFFFLSLNLFLMITMLWTAFDKANPLYIYSFAYPVQYVRASLEVSDLKPHWDNKGDCRIQNTIEVIKNPNLYVVFGKIQDPKTGIGGDHQWATSNPKEPNMYEYITDNTTGLTEEKKKRAYYMPQIVYKLEKCKLIPVKQFKELTDEEEFLVKSGKFYVETFCKKYREKWM
SIO_010081: PERMA_RS10390
subclass of: SO_0000673
so part of: PERMA_RS10390
location: 49810..50340
location: region:49810-50340:1
so has part: feature:49810-50340:1:exon

WP_012675164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49810-50340:1:exon

PERMA_RS10395
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10395
old locus tag: PERMA_A0066
so part of: sequence
location: 50451..50957
location: region:50451-50957:1
so has part: feature:50451-50957:1:exon
subclass of: SO_0000010

position:50451:1
position: 50451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50957:1
position: 50957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50451-50957:1:exon

PERMA_RS10395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10395
old locus tag: PERMA_A0066
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKKLTDQEKLEYAKADLGYFLKQERIAISIKQMAIAKAICRISNRADLLRTTKRHKVLWLYKEKTIKRKFVNRALIHSVAYAKKRFDEVIDETKSASSNKAKVLYLALLHDLAPISAVEIAFKKYAKNAGLQQLHYSKLKPLREWKEIIDAEIEIIKRKLEEKDDLR
SIO_010081: PERMA_RS10395
subclass of: SO_0000673
so part of: PERMA_RS10395
location: 50451..50957
location: region:50451-50957:1
so has part: feature:50451-50957:1:exon

WP_012675158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50451-50957:1:exon

PERMA_RS10400
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10400
old locus tag: PERMA_A0067
so part of: sequence
location: 50944..51339
location: region:50944-51339:1
so has part: feature:50944-51339:1:exon
subclass of: SO_0000010

position:50944:1
position: 50944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51339:1
position: 51339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50944-51339:1:exon

PERMA_RS10400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10400
old locus tag: PERMA_A0067
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTYDEYFNLILNSEPEDWLFFDEEDVLTFKNDLNIWIKRVITDEPFEEEWAKRNPNPEAYKVDVKFYYGNSLVDTDLYVSVDGYRAIVPLTNSRDSYDVKKSRYIIAKILNHDTNGYIERRYLNIFNVVDG
SIO_010081: PERMA_RS10400
subclass of: SO_0000673
so part of: PERMA_RS10400
location: 50944..51339
location: region:50944-51339:1
so has part: feature:50944-51339:1:exon

WP_012675168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50944-51339:1:exon

PERMA_RS10405
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10405
old locus tag: PERMA_A0068
so part of: sequence
location: 51756..52598
location: region:51756-52598:1
so has part: feature:51756-52598:1:exon
subclass of: SO_0000010

position:51756:1
position: 51756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52598:1
position: 52598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51756-52598:1:exon

PERMA_RS10405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10405
old locus tag: PERMA_A0068
inference: COORDINATES: protein motif:HMM:NF037161.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParM/StbA family protein
translation: MKVAFDLGFGWTKVCTDTGECFKFPTWLAYHSDTAISEVDKVLVDGKEYVVGEDARLERQRITITSIQELLNYFPVFKRYSLEKLGISESEAQIITGLPPIHKDKAEILEKQGAVVLPQGLGIFLDVADKVSEEELMIIDIGFNTVDYIVVIKNKRKKGNTIEKQGVERMIELFRNKLPDSLGYLKQFSFQRLMDVFEKGYATVEGERIDLTSYKERAIEEYNEVLKTRLKDEIGNLIDEIERIVIAGGGAYYLKDIRKAGIYIPEKPEFSQARGYLKYE
SIO_010081: PERMA_RS10405
subclass of: SO_0000673
so part of: PERMA_RS10405
location: 51756..52598
location: region:51756-52598:1
so has part: feature:51756-52598:1:exon

WP_012675157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51756-52598:1:exon

PERMA_RS10805
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10805
old locus tag: PERMA_A0069
so part of: sequence
location: 52591..52761
location: region:52591-52761:1
so has part: feature:52591-52761:1:exon
subclass of: SO_0000010

position:52591:1
position: 52591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52761:1
position: 52761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52591-52761:1:exon

PERMA_RS10805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10805
old locus tag: PERMA_A0069
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRATKLQLQNIKRLTNLLGIDVNTKGLTSKEASKLYRELLLLSVRGDKNGKAIKR
SIO_010081: PERMA_RS10805
subclass of: SO_0000673
so part of: PERMA_RS10805
location: 52591..52761
location: region:52591-52761:1
so has part: feature:52591-52761:1:exon

WP_012675152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52591-52761:1:exon

PERMA_RS10410
type: Gene
subclass of: SO_0000704
RO_0002162: 123214
locus tag: PERMA_RS10410
old locus tag: PERMA_A0070
so part of: sequence
location: 52739..53080
location: region:52739-53080:1
so has part: feature:52739-53080:1:exon
subclass of: SO_0000010

position:52739:1
position: 52739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53080:1
position: 53080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52739-53080:1:exon

PERMA_RS10410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 123214
locus tag: PERMA_RS10410
old locus tag: PERMA_A0070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKLSKDKTTISISLSKEVVEVLNVFKNRSKLIDDILSSLLLNLSPAEMLELIKTMTNGGDVIEFLIKKKCRELGIQMQVDKTEDFETKQVKEPKAVVEEKKSNKVNPQDWWG
SIO_010081: PERMA_RS10410
subclass of: SO_0000673
so part of: PERMA_RS10410
location: 52739..53080
location: region:52739-53080:1
so has part: feature:52739-53080:1:exon

WP_012675187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52739-53080:1:exon