Cardinium endosymbiont cEper1 of Encarsia pergandiella plasmid pCher, complete sequence.
type: Entry
definition: Cardinium endosymbiont cEper1 of Encarsia pergandiella plasmid pCher, complete sequence.
sequence version: NC_018606.1
sequence date: 2023-03-12
sequence: sequence
division: CON
label: NC_018606.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMEA2272294
keyword: RefSeq
keyword: complete genome
source: Cardinium endosymbiont cEper1 of Encarsia pergandiella
organism: Cardinium endosymbiont cEper1 of Encarsia pergandiella
taxonomy: Bacteria; Bacteroidota; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Cardinium.
reference: 1
references: 23133394
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nHE983996.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 11:46:48\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 840\nCDSs (total) :: 798\nGenes (coding) :: 747\nCDSs (with protein) :: 747\nGenes (RNA) :: 42\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 37\nncRNAs :: 2\nPseudo Genes (total) :: 51\nCDSs (without protein) :: 51\nPseudo Genes (ambiguous residues) :: 0 of 51\nPseudo Genes (frameshifted) :: 26 of 51\nPseudo Genes (incomplete) :: 31 of 51\nPseudo Genes (internal stop) :: 13 of 51\nPseudo Genes (multiple problems) :: 16 of 51\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 57800
topology: circular
so has quality: SO_0000988
location: 1..57800
location: region:1-57800:1
RO_0002162: 1231626

NC_018606
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMEA2272294
type: BioSample
SIO_000068: biosample

1
title: Comparative genomics suggests an independent origin of cytoplasmic incompatibility in Cardinium hertigii
author: Penz, T.
author: Schmitz-Esser, S.
author: Kelly, S.E.
author: Cass, B.N.
author: Muller, A.
author: Woyke, T.
author: Malfatti, S.A.
author: Hunter, M.S.
author: Horn, M.
journal: PLoS Genet 8 (10), e1003012 (2012)
pubmed: 23133394

23133394
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Horn, M.
journal: Submitted (04-SEP-2012) University of Vienna, Department of Microbial Ecology, Althanstr. 14, A-1090 Wien, AUSTRIA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57800:1
position: 57800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-57800:1:source
so part of: sequence
organism: Cardinium endosymbiont cEper1 of Encarsia pergandiella
mol type: genomic DNA
strain: cEper1
plasmid: pCher

1231626
type: Taxonomy
SIO_000068: taxonomy

AL022_RS03915
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03915
old locus tag: CAHE_p0001
old locus tag: RI14_RS03900
so part of: sequence
location: complement(204..1178)
location: region:204-1178:-1
so has part: feature:204-1178:-1:exon
subclass of: SO_0000010

position:204:-1
position: 204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178:-1
position: 1178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204-1178:-1:exon

AL022_RS03915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03915
old locus tag: CAHE_p0001
old locus tag: RI14_RS03900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014935025.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MKYIGIDIAKSSFVAAFPKGKGYTTATYKNDPNGIAIFLSKLDKCLDHCVLEATGNYGCLLVKMLLEADLSVSVINPKQIKHFTKVVNHITKTDKVDAELISLYGSKMEPKPYKMPLASIQALKQQKTLFAQLKKQLTMCYNLLESFSVLPKPDTVSLTMVKQTISYLEEQIVILEQQMLSITQETYQDLYKRISSIKGIGDRTTMELIVSTGGGNHFESAKQFSKYVGLAPIYEHSGSSVRKKGHINRHGNPQLRSLLYIASWSAIRFNKSCKDFYERLKERGKPGKVALIAVANKLIRQVFAIMRDHTFYVDGHLSKLKANP
SIO_010081: AL022_RS03915
subclass of: SO_0000673
so part of: AL022_RS03915
location: complement(204..1178)
location: region:204-1178:-1
so has part: feature:204-1178:-1:exon

WP_014934881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204-1178:-1:exon

AL022_RS03920
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03920
old locus tag: CAHE_p0002
old locus tag: RI14_RS03905
so part of: sequence
location: 1431..2375
location: region:1431-2375:1
so has part: feature:1431-2375:1:exon
subclass of: SO_0000010

position:1431:1
position: 1431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2375:1
position: 2375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431-2375:1:exon

AL022_RS03920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03920
old locus tag: CAHE_p0002
old locus tag: RI14_RS03905
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934335.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MVTSKFLSPKNDVAFRKIFGSEKHKDILIHFINDVLNLKASDKVEKVTFLSTIQDPDIAYKKESVVDVLCTDQYGKQIIVEMQVSPQKGFEKIAQYYASKAYSRQLSSGQELGGRYQDLKAVIFIAITDYVIFPDKKDYISNHVILDSKTYERDLKDFSFTFIELPKFNISCIEGLSTIIEKWCYFFKHAPSTSEEDLKKLIGSDLVIQRAYEALNRFNWSEKELFTYEQEIKRIMDNQAVEDYMKQKSREEGREEGREEGREEGIRIGEEKGKREGEKEKALSIAKAMLKDGFQLDKVMLFTGLSKYDIQSII
SIO_010081: AL022_RS03920
subclass of: SO_0000673
so part of: AL022_RS03920
location: 1431..2375
location: region:1431-2375:1
so has part: feature:1431-2375:1:exon

WP_014934981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1431-2375:1:exon

AL022_RS03925
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03925
old locus tag: CAHE_p0003
old locus tag: RI14_RS03910
pseudo: true
so part of: sequence
location: complement(<2438..2890)
location: region:2438-2890:-1
so has part: feature:2438-2890:-1:exon
subclass of: SO_0000010

position:2438:-1
position: 2438
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2890:-1
position: 2890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2438-2890:-1:exon

AL022_RS03925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03925
old locus tag: CAHE_p0003
old locus tag: RI14_RS03910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012736482.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS481 family transposase
SIO_010081: AL022_RS03925
subclass of: SO_0000673
so part of: AL022_RS03925
location: complement(<2438..2890)
location: region:2438-2890:-1
so has part: feature:2438-2890:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2438-2890:-1:exon

AL022_RS03930
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03930
old locus tag: CAHE_p0004
old locus tag: RI14_RS03915
so part of: sequence
location: complement(2868..3380)
location: region:2868-3380:-1
so has part: feature:2868-3380:-1:exon
subclass of: SO_0000010

position:2868:-1
position: 2868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380:-1
position: 3380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2868-3380:-1:exon

AL022_RS03930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03930
old locus tag: CAHE_p0004
old locus tag: RI14_RS03915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MVYQYVREPLRSEEADRLCQACETVQEKLIVWTLLDTGLRVSELCGLTPQQILWQQKAIRVSGKGGPYGKKSKKRVVPMSKRVQTLLEHYFAIHNAWPVGIRQVQKIIKQIANTAKITQEVSPHVLRHTFATLALQKGISLASVQKILGHDRLMTTAIYLNFTDAHVMEE
SIO_010081: AL022_RS03930
subclass of: SO_0000673
so part of: AL022_RS03930
location: complement(2868..3380)
location: region:2868-3380:-1
so has part: feature:2868-3380:-1:exon

WP_014934983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2868-3380:-1:exon

AL022_RS03935
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03935
old locus tag: CAHE_p0005
old locus tag: RI14_RS03920
so part of: sequence
location: 3728..4711
location: region:3728-4711:1
so has part: feature:3728-4711:1:exon
subclass of: SO_0000010

position:3728:1
position: 3728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4711:1
position: 4711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3728-4711:1:exon

AL022_RS03935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03935
old locus tag: CAHE_p0005
old locus tag: RI14_RS03920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014935040.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MEKITPKVDLAFKKIFGVEENKDLLIELINATVSPADQVVDVTLLNPYNPKNFRSDKLSILDIKALSETGKRFNIEIQITDEADYDKRALYYWAKLYTDQLKVSQGYSKLNKAIGIHILNFISIADNKKYHNVFRITEKESGIPYFHDVELHTIELTKFSKDPDENLTSLLEKIKTSLDIWTAFLTRHDLLNKDNLPGPLAIPSLKKALHVLDTLNFTDEERMAYEDHLKWLLIEANTVEKYRQEGEEKGRQEGREEGRQEGREEGRQEGREEGRKEGRQEGIRIGEEKGEKEKAFSIAKAMLLKGYSMEEITILTRLSKTDIQDIM
SIO_010081: AL022_RS03935
subclass of: SO_0000673
so part of: AL022_RS03935
location: 3728..4711
location: region:3728-4711:1
so has part: feature:3728-4711:1:exon

WP_014934984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3728-4711:1:exon

AL022_RS03940
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03940
old locus tag: CAHE_p0006
old locus tag: RI14_RS03925
so part of: sequence
location: complement(4788..5495)
location: region:4788-5495:-1
so has part: feature:4788-5495:-1:exon
subclass of: SO_0000010

position:4788:-1
position: 4788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5495:-1
position: 5495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4788-5495:-1:exon

AL022_RS03940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03940
old locus tag: CAHE_p0006
old locus tag: RI14_RS03925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934985.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MFTITHRLLPYFKGFCSSPELILLFVYMKCRFSLSYRDLEEMMHTRGAKIDHSTLQRWVIKFIPLIDQEVRKRKRPVGSSWRMDETYVKLNGKWIYLYRAVDRYGDTVDFFLSERRDKSAALYFFRKAIKDNNTPSKVVVDKSGSNKAALDALNTELDQDHKIQIFQNKYLXNRVEQDHRFIKKRIKPMLGFKSFHSANITXTGIENIRIIQKGQLIGAKKQESTFENFAKLMSE
SIO_010081: AL022_RS03940
subclass of: SO_0000673
so part of: AL022_RS03940
location: complement(4788..5495)
location: region:4788-5495:-1
so has part: feature:4788-5495:-1:exon

WP_014934985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4788-5495:-1:exon

AL022_RS03945
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03945
old locus tag: CAHE_p0007
old locus tag: RI14_RS03930
so part of: sequence
location: 6017..6808
location: region:6017-6808:1
so has part: feature:6017-6808:1:exon
subclass of: SO_0000010

position:6017:1
position: 6017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6808:1
position: 6808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6017-6808:1:exon

AL022_RS03945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03945
old locus tag: CAHE_p0007
old locus tag: RI14_RS03930
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MRKIRSKVFLSIGLLSLSTFSSCTNTRQSMNQSKEEQGLLKKISRGRPTAGNMRRVYNSNPKKMICLAATGVATILGSAGVGAYYFSNMSSEGSNIDGFNNTNFTTISPYHYESSTPGTFNETGWNSNDSTGSQVAYSAHEPSSTTIPNETFLTTTEKIDVKLIDSALENDANVNEKNIDGVAPIHIAAYTNNIEKFKLLLKNPYINVNQDSRLGTPLIIALEIGNEEMIQLLLNHPDINVNEKNSYKEYPFMQQHTIVVHQI
SIO_010081: AL022_RS03945
subclass of: SO_0000673
so part of: AL022_RS03945
location: 6017..6808
location: region:6017-6808:1
so has part: feature:6017-6808:1:exon

WP_014934986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6017-6808:1:exon

AL022_RS04625
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04625
old locus tag: CAHE_p0010
so part of: sequence
location: 7439..7864
location: region:7439-7864:1
so has part: feature:7439-7864:1:exon
subclass of: SO_0000010

position:7439:1
position: 7439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7864:1
position: 7864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7439-7864:1:exon

AL022_RS04625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04625
old locus tag: CAHE_p0010
inference: COORDINATES: protein motif:HMM:NF013698.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MKYIGIDIAKSSFVAAFPKGKGYTTATYKNDPNGIAIFLSKRDKCLDHCVLEATGNYGCLLVKMLLEADLSVSVINPKQIKHFTKVVNHITKTDKVDAELISLYGSKMEPKPYKMPLASIQALKQQKTLFAQLKKTIDNVL
SIO_010081: AL022_RS04625
subclass of: SO_0000673
so part of: AL022_RS04625
location: 7439..7864
location: region:7439-7864:1
so has part: feature:7439-7864:1:exon

WP_014934989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7439-7864:1:exon

AL022_RS04630
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04630
old locus tag: CAHE_p0011
so part of: sequence
location: 7918..8397
location: region:7918-8397:1
so has part: feature:7918-8397:1:exon
subclass of: SO_0000010

position:7918:1
position: 7918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8397:1
position: 8397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7918-8397:1:exon

AL022_RS04630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04630
old locus tag: CAHE_p0011
inference: COORDINATES: protein motif:HMM:NF014430.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MVKQTISYLEEQIVILEQQMLSITQETYQDLYKRISSIKGIGDRTTMELIVSTGGGNHFESAKQFSKYVGLAPIYEHSGSSVRKKGHINRHGNPQLRSLLYIASWSAIRFNKSCKDFYERLKERGKPGKVALIAVANKLIRQVFAIMRDHTFLCRWTSI
SIO_010081: AL022_RS04630
subclass of: SO_0000673
so part of: AL022_RS04630
location: 7918..8397
location: region:7918-8397:1
so has part: feature:7918-8397:1:exon

WP_148269075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7918-8397:1:exon

AL022_RS03960
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03960
old locus tag: CAHE_p0012
old locus tag: RI14_RS03940
so part of: sequence
location: complement(8636..9295)
location: region:8636-9295:-1
so has part: feature:8636-9295:-1:exon
subclass of: SO_0000010

position:8636:-1
position: 8636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9295:-1
position: 9295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8636-9295:-1:exon

AL022_RS03960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03960
old locus tag: CAHE_p0012
old locus tag: RI14_RS03940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004118046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MFIRAYLRASTKDQSADRAKDIMDQFVHERGYKIASYYRENISGTKLERPELARLLTDSHPNDILLIEQMDRLTRLTNSDWETLKKKIQQHQLRIVSLDIPTSWQALDKQQPEKNDPVTRAVISSINNMIIDLMATMSYKDWISRLNRQKQGIKKAHEQGKYKGKKADHERHKKVIYYRHVKKLSIQETAYATGYSKAQICRIQRLNILNNLTDEQKNF
SIO_010081: AL022_RS03960
subclass of: SO_0000673
so part of: AL022_RS03960
location: complement(8636..9295)
location: region:8636-9295:-1
so has part: feature:8636-9295:-1:exon

WP_014934962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8636-9295:-1:exon

AL022_RS03965
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03965
old locus tag: CAHE_p0013
old locus tag: RI14_RS03945
so part of: sequence
location: 9572..10567
location: region:9572-10567:1
so has part: feature:9572-10567:1:exon
subclass of: SO_0000010

position:9572:1
position: 9572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10567:1
position: 10567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9572-10567:1:exon

AL022_RS03965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03965
old locus tag: CAHE_p0013
old locus tag: RI14_RS03945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934991.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MRKEDNKTKDKENILDKPHDQVFKNTFCNKEAMLDFLSANLPSDLLSRIDKESLELTNKSFVDPVGRXGESDLVFKTNINGNPGYLYILAEHQSSEDLYMGLRFMEYNVQLLRQHLKEHGNVPLPVILNICVYSGNKPYKGSNRLFDLFSDPELSKTCMFDSFHLVDLYSTSEDELISYKRGAFAAMVLKQGIYRDFTQWFSDRIGLIVEFLEKDYISYADAVFLYMLKVDDNPNLLETIKNANPKLKNIAMSVAERLIQQGEQKGRQEGRQEGRQEGRQEGRQEGRQEGIRIGEEKSKLEIAKTMLSKGYSIEDIMLITGLHYSDIQSII
SIO_010081: AL022_RS03965
subclass of: SO_0000673
so part of: AL022_RS03965
location: 9572..10567
location: region:9572-10567:1
so has part: feature:9572-10567:1:exon

WP_014934991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9572-10567:1:exon

AL022_RS03970
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03970
old locus tag: CAHE_p0014
old locus tag: RI14_RS03950
so part of: sequence
location: complement(10692..11663)
location: region:10692-11663:-1
so has part: feature:10692-11663:-1:exon
subclass of: SO_0000010

position:10692:-1
position: 10692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11663:-1
position: 11663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10692-11663:-1:exon

AL022_RS03970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03970
old locus tag: CAHE_p0014
old locus tag: RI14_RS03950
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MRKIRSKVFLSIGLLSLSTFSSCTNTRQSMNQSKEEQGLLKKISRGRPTAGNMRRVYNSNPKKMICLAATGVATILGVSGLAVCAYSNISSEVSNIAGFDNTNFRNISPYHYESSTPGTFNETGWNSNDSTGSQVAYSAHEPSSTTIPNETFLTTTEKIDVKLIDSALENDANVNEKNIDGVAPIHIAAYTNNIEKFKLLLKNPYINVNQDSRLGTPLIIALEIGNEEMIQLLLNHPDINVNEKNSYKEYPIHAAAYYCRPSNLELLLKDKRVMLNVTDSSNKKALDIAEKRCNPLCVNLLKEAEKNRSTILGGSVQYTVLST
SIO_010081: AL022_RS03970
subclass of: SO_0000673
so part of: AL022_RS03970
location: complement(10692..11663)
location: region:10692-11663:-1
so has part: feature:10692-11663:-1:exon

WP_014934992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10692-11663:-1:exon

AL022_RS03975
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03975
old locus tag: CAHE_p0015
old locus tag: RI14_RS03955
so part of: sequence
location: complement(11724..12656)
location: region:11724-12656:-1
so has part: feature:11724-12656:-1:exon
subclass of: SO_0000010

position:11724:-1
position: 11724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12656:-1
position: 12656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11724-12656:-1:exon

AL022_RS03975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03975
old locus tag: CAHE_p0015
old locus tag: RI14_RS03955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKLKKYSLLCLCLLFPVIAHAGIGDKIKSGLSAACDVIPGGGAVKKLLGLSAEEKTAELMEEQVSTSKNFLEKMKDAAQSMQKLKESVEEANRIRKQGAELLQDVSDAKYGKVLAGISEQISGISLDPSSYIPDLDCTXDIKRDCSFSCYREKVLLGNIDDFTNRSSNFMGANIPKSLNARCKEIDQELRRSDQIKTAAKERNNKLIGPYQAQIKSLEVQNKNIDKILSSKLYKDDPVKYFQLESIKNKNILDMGKLVERISRIEAASEEVSKEDKDAIAKVYNQKLSKDLRNAIIKSKIERNKRFKNK
SIO_010081: AL022_RS03975
subclass of: SO_0000673
so part of: AL022_RS03975
location: complement(11724..12656)
location: region:11724-12656:-1
so has part: feature:11724-12656:-1:exon

WP_014934993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11724-12656:-1:exon

AL022_RS03980
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
gene: traM
locus tag: AL022_RS03980
old locus tag: CAHE_p0016
old locus tag: RI14_RS03960
so part of: sequence
location: complement(12653..13549)
location: region:12653-13549:-1
so has part: feature:12653-13549:-1:exon
subclass of: SO_0000010

position:12653:-1
position: 12653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13549:-1
position: 13549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12653-13549:-1:exon

AL022_RS03980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
gene: traM
locus tag: AL022_RS03980
old locus tag: CAHE_p0016
old locus tag: RI14_RS03960
inference: COORDINATES: protein motif:HMM:NF023922.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transposon protein TraM
translation: MKINKIFYGVVGLFGLVVVVLKDIKKEKSWNDFFVAPPPKESKLLKPSGPLSITEETNERIKNIGKSKSNQKSCTLFQNMLQTVQKKEEVAKVDPVVVQPEPVKEAKKVKVTPKKVVKKTKIVEKQIVSPLEPNYFPGYVEIKGSKKSKDCVSTSFISGCLYGTQNLKHGRSIIILVKEAFTYQGKKIPKGALLYGVVAFGKERVLSKLETAVFGKTTLEVSIALYDTDYTLGLLVENLYPFIDSAQDKLLSKAASSSSNSWIQEISSSAIDALKAMKKEPKVTLENRRKVLLKPIKK
SIO_010081: AL022_RS03980
subclass of: SO_0000673
so part of: AL022_RS03980
location: complement(12653..13549)
location: region:12653-13549:-1
so has part: feature:12653-13549:-1:exon

WP_014934994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12653-13549:-1:exon

AL022_RS03985
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03985
old locus tag: CAHE_p0017
old locus tag: RI14_RS03965
so part of: sequence
location: complement(13567..14370)
location: region:13567-14370:-1
so has part: feature:13567-14370:-1:exon
subclass of: SO_0000010

position:13567:-1
position: 13567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14370:-1
position: 14370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13567-14370:-1:exon

AL022_RS03985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03985
old locus tag: CAHE_p0017
old locus tag: RI14_RS03965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKNSFLLFCIWLMAYVPTLAVNIKVSDQHPTFIALRGSIDTVYFGSGNQEYVFKEKGRFLHIRAKHPGTSKTNITIFYIDNEGKKNERLNAFYGTISYDAAIQPMYDLTNDNIKGIESSEKSDIEEPLTELLTEALAYLEKAPQTIRRFSQTKQKVSCTLVNAMSTGDAIILKFVLENRSPYSYKLGKSYFLVNQKEKTPIPIILKPKRVVVEPGHTECMTFVLEYKADKSGMLIRFEEKQGRRDLSINLSSNLLTNLPCFREEAK
SIO_010081: AL022_RS03985
subclass of: SO_0000673
so part of: AL022_RS03985
location: complement(13567..14370)
location: region:13567-14370:-1
so has part: feature:13567-14370:-1:exon

WP_014934995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13567-14370:-1:exon

AL022_RS03990
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03990
old locus tag: CAHE_p0018
old locus tag: RI14_RS03970
so part of: sequence
location: complement(14357..15058)
location: region:14357-15058:-1
so has part: feature:14357-15058:-1:exon
subclass of: SO_0000010

position:14357:-1
position: 14357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15058:-1
position: 15058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14357-15058:-1:exon

AL022_RS03990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03990
old locus tag: CAHE_p0018
old locus tag: RI14_RS03970
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLLVAIQPINKTMTDNTGNISVDTSSIRQLNSYHYGKNISLLRFLVIFLAISLGGLSCFLGYLVFKQNRTDLVYFVTNTGTHAGIKKENPNDIARESFELENFSIRFIQDSFAHSENNYKENIERALTVMSNESRITLKKLFSDDSLFQVYKESNGVTTVHIDKVFTDTTSYPYRTQLYFKTDLKYLSSQGDIKTHSYHQGIELEMAITARCSKNPYGLMITQLTFINDEKK
SIO_010081: AL022_RS03990
subclass of: SO_0000673
so part of: AL022_RS03990
location: complement(14357..15058)
location: region:14357-15058:-1
so has part: feature:14357-15058:-1:exon

WP_014934996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14357-15058:-1:exon

AL022_RS03995
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS03995
old locus tag: CAHE_p0019
old locus tag: RI14_RS03975
so part of: sequence
location: complement(15156..16052)
location: region:15156-16052:-1
so has part: feature:15156-16052:-1:exon
subclass of: SO_0000010

position:15156:-1
position: 15156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16052:-1
position: 16052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15156-16052:-1:exon

AL022_RS03995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS03995
old locus tag: CAHE_p0019
old locus tag: RI14_RS03975
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MRKKYTSYFKSSIVISGIFTCLLFISSCGKLARYEMNSNKIGLDSFKNQIKTGYIPIKNLGSGTFLHFAALSGNIEEVKSLLKNGDIDVDVQNIYESSPLHYASENGHVKVVKELLNNGANVNAKNIARWTPLHYASKNGHLEVVKELLNNGANINEKNKYESTPLHLASASNRVKVVKALVNDSSIQVNEKDKYGCIPFYIAVEKGYTKIVKELLKNQDIQGDEKYFDRTMLHFAVQNSHLQIVEILVNDSRFKSNINELTSLFETPLDLAFVKDDKNMMKLLKKHGAFRVCSINKY
SIO_010081: AL022_RS03995
subclass of: SO_0000673
so part of: AL022_RS03995
location: complement(15156..16052)
location: region:15156-16052:-1
so has part: feature:15156-16052:-1:exon

WP_014934997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15156-16052:-1:exon

AL022_RS04000
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04000
old locus tag: CAHE_p0020
old locus tag: RI14_RS03980
so part of: sequence
location: complement(16058..16843)
location: region:16058-16843:-1
so has part: feature:16058-16843:-1:exon
subclass of: SO_0000010

position:16058:-1
position: 16058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16843:-1
position: 16843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16058-16843:-1:exon

AL022_RS04000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04000
old locus tag: CAHE_p0020
old locus tag: RI14_RS03980
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANFESILSSSVNSTVQNVAVDATIIKMITLSKQLLPIFLLVRLIVGYFQNHLDSTQLIKYAYTSVLTLIVTFLWLQYYVNIFQLLDKLTALLMEQFDWTALADPDATSSDKDSTFSIWEWIKSGWSTLANCSLNCLSGVLCFATTRFRHQALIFSLQVGPLAIASSLLPGNFSTIASYWLNMVISFLMWGFTIDLIDYALVTLDVSSGISTCLLYTMVGPLTSLYIGNTIGNSLFALGVSNTHQLISYGKRFLPKLNNKI
SIO_010081: AL022_RS04000
subclass of: SO_0000673
so part of: AL022_RS04000
location: complement(16058..16843)
location: region:16058-16843:-1
so has part: feature:16058-16843:-1:exon

WP_014934998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16058-16843:-1:exon

AL022_RS04005
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04005
old locus tag: CAHE_p0021
old locus tag: RI14_RS03985
so part of: sequence
location: complement(16836..19289)
location: region:16836-19289:-1
so has part: feature:16836-19289:-1:exon
subclass of: SO_0000010

position:16836:-1
position: 16836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19289:-1
position: 19289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16836-19289:-1:exon

AL022_RS04005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04005
old locus tag: CAHE_p0021
old locus tag: RI14_RS03985
inference: COORDINATES: protein motif:HMM:NF040179.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFSKKTKKESLERVFPFVDFHQDMAVAADGTISVPFKSDLSFQEQYTQQNYIDWTTIVASSMKVLPCDSLIQQVDIYYPDQWHNPGIDCDEIDFFVEKKLKHTEGRPILRHESYLILSFPGLYKNYGPLSTFYCRSETQNWKNDPFSGLEKRLTLAAKDAQQFRQSVSSHLSLTQLGAKDFSRLVHRYLSLNFLDPEDIITSGLVPEKDYVISSPNKIQVVSLTESSYQLNHTVLDKFGHNGGGCAPLTEGLGRGLNFPHIISRVIRQIDSEFFLKSHFNSFAWSEATKLDERKLKNIRQIRSEMSDFEQTLRQREEPIVYLSMLVIPFSRGNVDTLRDYSSQVQAAFAQIGMKSYLETIDTANLFCTALPGNGNQTYRRFPIPLYSAVAHMNSTTPFTGYTEGVLLANRYKEPIYLNPFNAELDNQNAFIFGPSGSGKSFFNGKMIKDRFELGHIVIVIDSGGTYRHLFQSLGGKYIELTAEKSLSLNPFLFAPNPEGKYLPDSSKIIFLVQLIGKMWKGNLNENPMNEVEKSLLSEWISSYYQNLQSKVIPTLTGFYDYLKVLVETNGKDISDIKNEQLFPFQEFFIVLKPFSHRIYKEHFNALSQDYLSDHSLVCFELEAIKGNSKLYPLVVQILFDFAFEMVAKYPDKTKFIDIEEGWTTLDDSSREHIEAFYRKGRKTKTSIRIITQDIGEIKSSKIASAIKNNAATFILLYNEKASSREEIGAFLGMNDLDMEKYASLRRQNGPDGFREIFIKEMSHSHVWLLETSPWEYAMLTSNPSERNKIAALTKQYGSIKDGIIEWVYQTKKERHG
SIO_010081: AL022_RS04005
subclass of: SO_0000673
so part of: AL022_RS04005
location: complement(16836..19289)
location: region:16836-19289:-1
so has part: feature:16836-19289:-1:exon

WP_014934999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16836-19289:-1:exon

AL022_RS04010
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04010
old locus tag: CAHE_p0022
old locus tag: RI14_RS03990
so part of: sequence
location: complement(19267..19590)
location: region:19267-19590:-1
so has part: feature:19267-19590:-1:exon
subclass of: SO_0000010

position:19267:-1
position: 19267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19590:-1
position: 19590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19267-19590:-1:exon

AL022_RS04010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04010
old locus tag: CAHE_p0022
old locus tag: RI14_RS03990
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQKLVNSPYLKEKGFLGPFSLTEALAVLAISIMAYIISCYCEEWLHYNRLWTIALACTVPVLSIFVKICLKNSNPTWLSSVLSYYFFYLKEDTPCFKVRLNVFLKKD
SIO_010081: AL022_RS04010
subclass of: SO_0000673
so part of: AL022_RS04010
location: complement(19267..19590)
location: region:19267-19590:-1
so has part: feature:19267-19590:-1:exon

WP_014935000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19267-19590:-1:exon

AL022_RS04015
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04015
old locus tag: CAHE_p0023
old locus tag: RI14_RS03995
so part of: sequence
location: complement(19599..19841)
location: region:19599-19841:-1
so has part: feature:19599-19841:-1:exon
subclass of: SO_0000010

position:19599:-1
position: 19599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19841:-1
position: 19841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19599-19841:-1:exon

AL022_RS04015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04015
old locus tag: CAHE_p0023
old locus tag: RI14_RS03995
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLLDIGTSLNDWIKSGYDLLKLIAKLLSVVGCVRLAYLYHVGRDKGCVFYELLHWIGAIVFFSSIEPIYNMIANFFKIT
SIO_010081: AL022_RS04015
subclass of: SO_0000673
so part of: AL022_RS04015
location: complement(19599..19841)
location: region:19599-19841:-1
so has part: feature:19599-19841:-1:exon

WP_014935001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19599-19841:-1:exon

AL022_RS04020
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04020
old locus tag: CAHE_p0024
old locus tag: RI14_RS04000
so part of: sequence
location: complement(19991..22567)
location: region:19991-22567:-1
so has part: feature:19991-22567:-1:exon
subclass of: SO_0000010

position:19991:-1
position: 19991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22567:-1
position: 22567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19991-22567:-1:exon

AL022_RS04020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04020
old locus tag: CAHE_p0024
old locus tag: RI14_RS04000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHKKQFSCLFIIALFSLCFKCNSDYFSSYDRDNAWSPKYVLKLNIENNKPAELSQKVPLCLEVKFDSEWNKRTIPESRRSSPIAESLINVIIKDVRIVGGRGKLSLRNEKDDKDFSKIFKDGIKVRQGTTKLWYIPDVPSSESGNKYCHSHQIYITAKVLDLDENQEHGDLVKCTIELGEPSYGLDLKSNDSVAYIEDQSIPVELIVKSDNLLASKQNYKISKLDILGGDGNVYTEVDGVRKKLSINDPINFGKNIFYYVPNPESSGNHKLVFTVQNIQGYTGKQASLPIQVESHRVQNFTAHITLPPNNESLLPFKEIICSLRITSLSGKENELDYYVDSIELNGGKFILDGKELVVGTPLKEGNIEMVFDPLHYSGDVQASIILRNSKGDSSKVTFSRPLVISDPSLGVESTIVNKTIKLTVNCSYTGSNANFVLNSYSLSRGIEGVLKTITGATIKDPILLSLGENEFTFELSSIDINLIKKSPIINFDIIHPDGTHHKTSSNLSIFVFEKLDSMLRTLETESSNLYRRLAPDYSNRTLLYASIEALEKESTNWINRCYKIGQVMDYIKNDPNVTNSVTESITRLNTLRSSTEDRITKRKLSSKMLLEWNSSIDDIDDNPSSKYCTERTNKIELEINNSSNIFELCRGIVGMEDIVNDFEGLPGKIAELRIKTQEKLNEENRQATEEEAFKRTTNERIVFEQQTRTSAIATVNQSISSEQETRESSISSVLQSMSSERDMREIHKKEIYRSIENERKLRQEEIKNLDKYIYKNDKALRRWINHIEKKHKRAEAHFEFLDAKIGVLNDPCIENKKEMYEKDEVLSKIQEKVARAELGSNYEYDSDPKSYSSDSDSD
SIO_010081: AL022_RS04020
subclass of: SO_0000673
so part of: AL022_RS04020
location: complement(19991..22567)
location: region:19991-22567:-1
so has part: feature:19991-22567:-1:exon

WP_014935002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19991-22567:-1:exon

AL022_RS04025
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04025
old locus tag: CAHE_p0025
old locus tag: RI14_RS04005
so part of: sequence
location: complement(22679..23200)
location: region:22679-23200:-1
so has part: feature:22679-23200:-1:exon
subclass of: SO_0000010

position:22679:-1
position: 22679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23200:-1
position: 23200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22679-23200:-1:exon

AL022_RS04025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04025
old locus tag: CAHE_p0025
old locus tag: RI14_RS04005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKLKNVLHIVLLLSFFNPVFGKSNHFYQPLKSVHSNGCHCLEVRYGIWKKMHGVKAGYVCHFNETWYMKLSGGFSNKKLLSFSSTIYYNIYSNHESIYFGILFGPQVSYQFKYNNWLVKNKKFNAGIQLGIEYEKVLTEYLSLIVLPETTISILDKNNIFNYYLSTGIRVNF
SIO_010081: AL022_RS04025
subclass of: SO_0000673
so part of: AL022_RS04025
location: complement(22679..23200)
location: region:22679-23200:-1
so has part: feature:22679-23200:-1:exon

WP_014935003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22679-23200:-1:exon

AL022_RS04030
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04030
old locus tag: CAHE_p0026
old locus tag: RI14_RS04010
so part of: sequence
location: complement(23247..24947)
location: region:23247-24947:-1
so has part: feature:23247-24947:-1:exon
subclass of: SO_0000010

position:23247:-1
position: 23247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24947:-1
position: 24947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23247-24947:-1:exon

AL022_RS04030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04030
old locus tag: CAHE_p0026
old locus tag: RI14_RS04010
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MKQLHYLFLFFPLAAIDCTGCNKTSKSINNLKHKKCSYEKNTINSNKYVDVDVDVDKKDRRGYTALYNAVRFNDIDKARFLLKSGSDPNIAMLYGSILEKAVSKKNVEMVKLLLSYGAYIIVQEDGSSTILDCFRHKSNDRSKEIYQLLVNSLSPEERDRVNKKSKEDVNSLDSIGYTPLHWAVVDNNLKEAKRLLELGADPNVVVNGSSTPIYISVQNQNKEMVRLLLSHGAEVYYCDEKTNPVFMSYDIELMDIILTHLADSGKKDFEGLSPIHWACRDGRLSLVKYILNNDSSLINDSNNLYNFTPLHWAARGGFKDMVSFLISKGANKTAKSRSNFTPLMLAISNNHEQFRSILSPDDAQIETENSNTDSEQCSICLNTMGRSDCIIFPSTQIECGHTFHFECIAGYVANKLSTYPWVRCPNCRNKISEGLCNSMLSSSNPTRNESLIEAVKQSNYEVTSLLLSCEADPNHFDSNTRMTPLHYAARNMSNGKARQDILDKICMILIQHGAKVNAIDSGRKTARDYIPSYNEALTVLVESGGMRSGYCDHPKTAFGLPVRKDK
SIO_010081: AL022_RS04030
subclass of: SO_0000673
so part of: AL022_RS04030
location: complement(23247..24947)
location: region:23247-24947:-1
so has part: feature:23247-24947:-1:exon

WP_014935004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23247-24947:-1:exon

AL022_RS04035
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04035
old locus tag: CAHE_p0027
old locus tag: RI14_RS04015
so part of: sequence
location: complement(24962..25150)
location: region:24962-25150:-1
so has part: feature:24962-25150:-1:exon
subclass of: SO_0000010

position:24962:-1
position: 24962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25150:-1
position: 25150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24962-25150:-1:exon

AL022_RS04035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04035
old locus tag: CAHE_p0027
old locus tag: RI14_RS04015
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: METRLHLTQTINYQIVNSVMDLFYLGKHTNDYIDGMSPVEWSILKKKIKMAESLLDNGAGRV
SIO_010081: AL022_RS04035
subclass of: SO_0000673
so part of: AL022_RS04035
location: complement(24962..25150)
location: region:24962-25150:-1
so has part: feature:24962-25150:-1:exon

WP_014935005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24962-25150:-1:exon

AL022_RS04040
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04040
old locus tag: CAHE_p0028
old locus tag: RI14_RS04020
so part of: sequence
location: complement(25514..27058)
location: region:25514-27058:-1
so has part: feature:25514-27058:-1:exon
subclass of: SO_0000010

position:25514:-1
position: 25514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27058:-1
position: 27058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25514-27058:-1:exon

AL022_RS04040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04040
old locus tag: CAHE_p0028
old locus tag: RI14_RS04020
inference: COORDINATES: protein motif:HMM:NF014581.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MFILFLLYFGIPFWFHGDIKPSVKRDKKSIVLPKGYDKKSPFSIAIPTTNGKLPINNPQRGIYILGGAGSGKSIYILEPILYAMIKKGYCGIVYDYDFEGIQTDPRSKCCLSKFVYNCYIQLPEKERNKFSFKTINFTDLNKSSRINPIDPIYIEDREYLDEYVTVLLKNLNPVQKDDFWLLSTKSLLKGMIIYLCNQAPNCCTLPHVLLLSTKPIDKILGLIEQDKEAYMYSSSIFDAYKGGEKSSAQLSGITASFKTSLQPLLNKKLFWVLSKNEVNLTINDRYCPTLLCIGNFPAAKSAFSPVISLLLTVCFKSMYGHGRNKSFVSIDELSTLYIPGISEIPATARKYGISMISCIQSNAQLEDTYGHGGAKKLRDILSNQFIGKCGIESFGYASSLFGKEAHIVKSTSSSETYHAEGKGPNTTRGENISIHDKDVLQSQDFVKFPVGYFAGSVAESEGTFFEEQFRLVSDYDKSFKNKVLKDLPDINYVTDEDIMLNQKRIEEDIDALVV
SIO_010081: AL022_RS04040
subclass of: SO_0000673
so part of: AL022_RS04040
location: complement(25514..27058)
location: region:25514-27058:-1
so has part: feature:25514-27058:-1:exon

WP_158309918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25514-27058:-1:exon

AL022_RS04515
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04515
old locus tag: CAHE_p0029
so part of: sequence
location: complement(27412..27585)
location: region:27412-27585:-1
so has part: feature:27412-27585:-1:exon
subclass of: SO_0000010

position:27412:-1
position: 27412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27585:-1
position: 27585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27412-27585:-1:exon

AL022_RS04515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04515
old locus tag: CAHE_p0029
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNKVKILIKKLIQSGIDMNAFIKASGLSIQQEIVKVISNGYKSRKLITLKKKPFRY
SIO_010081: AL022_RS04515
subclass of: SO_0000673
so part of: AL022_RS04515
location: complement(27412..27585)
location: region:27412-27585:-1
so has part: feature:27412-27585:-1:exon

WP_014935007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27412-27585:-1:exon

AL022_RS04045
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04045
old locus tag: CAHE_p0031
old locus tag: RI14_RS04025
so part of: sequence
location: complement(27826..28083)
location: region:27826-28083:-1
so has part: feature:27826-28083:-1:exon
subclass of: SO_0000010

position:27826:-1
position: 27826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28083:-1
position: 28083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27826-28083:-1:exon

AL022_RS04045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04045
old locus tag: CAHE_p0031
old locus tag: RI14_RS04025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVENFITSVVDKYISLKKYKVSKKEVKKINPLDNEKYIKAKKKLLEIACKMIVIGYEKKEINKITGISNEKLKNLETIFNTKIL
SIO_010081: AL022_RS04045
subclass of: SO_0000673
so part of: AL022_RS04045
location: complement(27826..28083)
location: region:27826-28083:-1
so has part: feature:27826-28083:-1:exon

WP_014935009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27826-28083:-1:exon

AL022_RS04050
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04050
old locus tag: CAHE_p0032
old locus tag: RI14_RS04030
so part of: sequence
location: complement(28184..28456)
location: region:28184-28456:-1
so has part: feature:28184-28456:-1:exon
subclass of: SO_0000010

position:28184:-1
position: 28184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28456:-1
position: 28456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28184-28456:-1:exon

AL022_RS04050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04050
old locus tag: CAHE_p0032
old locus tag: RI14_RS04030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENNIKIMVETLIKEGVDMDLILKASGLAAKEIEEISPIAYGRYVGARKKLLEIAYRMIDLGYKTNEIVKVTGMINSKVEELKTKTKNKK
SIO_010081: AL022_RS04050
subclass of: SO_0000673
so part of: AL022_RS04050
location: complement(28184..28456)
location: region:28184-28456:-1
so has part: feature:28184-28456:-1:exon

WP_014935010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28184-28456:-1:exon

AL022_RS04055
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
gene: mobV
locus tag: AL022_RS04055
old locus tag: CAHE_p0033
old locus tag: RI14_RS04035
so part of: sequence
location: 28769..30688
location: region:28769-30688:1
so has part: feature:28769-30688:1:exon
subclass of: SO_0000010

position:28769:1
position: 28769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30688:1
position: 30688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28769-30688:1:exon

AL022_RS04055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
gene: mobV
locus tag: AL022_RS04055
old locus tag: CAHE_p0033
old locus tag: RI14_RS04035
inference: COORDINATES: protein motif:HMM:NF041497.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobV family relaxase
translation: MSFATFNIKSYKKGLIGIGRHIDRSCKEVRKTGLYEDEAEKSLNSELGLHIDPSKTHLNEELVHTGGKSLSELVDARISEGYTKEKSIRSDAVKALGLVMTGSHDRMKEIEANESLFESWKKANWDFACREFGGEKNIVRFSVHRDENTPHIHCVVVPITPDGRLSAKHYKDGIIKLQGYQNRYAAAMAPFGLERGIESKLTGRKHTTTQEYYKSVNKIEREVEQATKHINTLNPFYRDKAKKELENVQDKVRSLEEENKSLKREVSYAQTTRKTTRDNLIKSDLERIKREVNLIQHVSSMGYALDKSKSSNTWAVMEKDGDKVLIKNGPNQNGHWMYKSLVDDKDKGTIVDFMQNRGFTYQSICGLSSRHLDDRVIRDQKSLALEITDRASQRYIAQEAFDKVKVHEKNNYLHCRGIHRSTYEHYPSVKVGHKAVFALYKDLDKNGKGTICSTISYEFDAKGSVSDDGLHNSSKYFQKGLPRGLSVLVDPNISVKAIVVTESPIDALSHKQIHKDDGRTMYISTCGSLSEGIKKELGTVLAHAKERGRSVTLAFDNDLAGRQMHKTVSELARGHEVVCKDSIPSRSKDWSQELLSILGNQEMLKTLQKELVRSGQEHELRKQKRKEPTVMGLELSLDW
SIO_010081: AL022_RS04055
subclass of: SO_0000673
so part of: AL022_RS04055
location: 28769..30688
location: region:28769-30688:1
so has part: feature:28769-30688:1:exon

WP_041546383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28769-30688:1:exon

AL022_RS04060
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04060
old locus tag: CAHE_p0035
old locus tag: RI14_RS04040
so part of: sequence
location: 32005..32367
location: region:32005-32367:1
so has part: feature:32005-32367:1:exon
subclass of: SO_0000010

position:32005:1
position: 32005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32367:1
position: 32367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32005-32367:1:exon

AL022_RS04060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04060
old locus tag: CAHE_p0035
old locus tag: RI14_RS04040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDIKKKIGIRFFTEYESNPFIDDPSIKIIDIDFISGISKRSLNLIKYLIYKNAYTSEKFVFDFKEFNKITGYKGGKPNTSKSFIELIDKGLLARTDIPYVFWVNGNMLKSLALENEKKS
SIO_010081: AL022_RS04060
subclass of: SO_0000673
so part of: AL022_RS04060
location: 32005..32367
location: region:32005-32367:1
so has part: feature:32005-32367:1:exon

WP_014935013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32005-32367:1:exon

AL022_RS04065
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04065
old locus tag: CAHE_p0036
old locus tag: RI14_RS04045
so part of: sequence
location: 32485..34758
location: region:32485-34758:1
so has part: feature:32485-34758:1:exon
subclass of: SO_0000010

position:32485:1
position: 32485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34758:1
position: 34758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32485-34758:1:exon

AL022_RS04065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04065
old locus tag: CAHE_p0036
old locus tag: RI14_RS04045
inference: COORDINATES: protein motif:HMM:NF017116.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VapE family protein
translation: MLTKEKILEKAGGEGHLIRHLVPTFNPNIRKKNYKSIFSEKDNRPSMSIFSDNQGKWFYKSFNTGHQGDAFKMWADFYGLDCITQFREVLAVINQEMCLGLDSVQNIKVIPKPVLLKLSSDKKSESSLPSQTLSIEYIPSDSESIISNIYLKYWSQYGITQSVLDHFDVRQVSYLSYISNSGRFLSFKYFEKNQIVSAYHIDGRVKVYIPEIESSFSSDFSFKGQKKSFSYKNQTKEDVFGLSQLLKGTLDYILFLAGEKDTMSAYSQGFINVISLQSENQMPSDDLLKSLRTRTSVLLSCYDNDQAGKNASKKLSDSYGIVSISLPEEVKDISDYFQKYNSANFQFLLDEGIRKSKLISIKPVTSAKVEKTVSNKRITVKDYLRNKFNFRLNVFTKELEISIKRNSGIWDEVNISELRDNLSMHGIDCSRELLSCVLTSFFVKRFNPIEEYFLSFEGKEFDSNKDYIRQLSSYVHLKYPTYENKLYWYTHLKKWMIRAIRTLFNPDGINKHALILCSLKEGIGKSYFCEFLCPLPIIKYYTSSSNKDSEKDLQKALIRNFIINLEELHQLNASPEFIKGWLSQRYINVRFPFQEKETFACRIASFLGSSNNIEFLRSEMGYSRWIGFEVQSIDFLGKEARYVVERSWEQAYHLYKLDEESGELSMDEVEELETRSDSFTNKSTEAELIIRNLLPSTKEEGEFMTATDILIYLQNIVGITIRLNTKLVGSALRKAGFERINHRTVKGPLYGYFVKRV
SIO_010081: AL022_RS04065
subclass of: SO_0000673
so part of: AL022_RS04065
location: 32485..34758
location: region:32485-34758:1
so has part: feature:32485-34758:1:exon

WP_014935014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32485-34758:1:exon

AL022_RS04070
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04070
old locus tag: CAHE_p0037
old locus tag: RI14_RS04050
so part of: sequence
location: complement(34833..35081)
location: region:34833-35081:-1
so has part: feature:34833-35081:-1:exon
subclass of: SO_0000010

position:34833:-1
position: 34833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35081:-1
position: 35081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34833-35081:-1:exon

AL022_RS04070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04070
old locus tag: CAHE_p0037
old locus tag: RI14_RS04050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAISKKLPSYERQVNDLINKGGAVANTNKKEERTIQNIQLRLPNSLIKKIDSQCTNDDYKIKKSRHSWILDAILEKIDRENV
SIO_010081: AL022_RS04070
subclass of: SO_0000673
so part of: AL022_RS04070
location: complement(34833..35081)
location: region:34833-35081:-1
so has part: feature:34833-35081:-1:exon

WP_014935015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34833-35081:-1:exon

AL022_RS04075
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04075
old locus tag: CAHE_p0038
old locus tag: RI14_RS04055
so part of: sequence
location: complement(35131..35781)
location: region:35131-35781:-1
so has part: feature:35131-35781:-1:exon
subclass of: SO_0000010

position:35131:-1
position: 35131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35781:-1
position: 35781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35131-35781:-1:exon

AL022_RS04075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04075
old locus tag: CAHE_p0038
old locus tag: RI14_RS04055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015146133.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIYVIGGIKGGSGKSTIATNLAVLMAKKFKDILLIDADDQQSSSDFTVFRSETMKDKLDYTSIQLSDRTVRDQTIKLKSKYEHIIIDTGGRDTTSQRAATSIANIYLVPFVPRSFDIWTLEKVSILIEEMRIINPNLRSFSFLNKADFSGQDNNEAADFLKENKTLEFIDICIGNRKSFPNASSKGLAITETKPKDVKAIQEFNDLFNFLVSISLD
SIO_010081: AL022_RS04075
subclass of: SO_0000673
so part of: AL022_RS04075
location: complement(35131..35781)
location: region:35131-35781:-1
so has part: feature:35131-35781:-1:exon

WP_014935016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35131-35781:-1:exon

AL022_RS04080
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04080
old locus tag: CAHE_p0039
old locus tag: RI14_RS04060
so part of: sequence
location: 36247..37215
location: region:36247-37215:1
so has part: feature:36247-37215:1:exon
subclass of: SO_0000010

position:36247:1
position: 36247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37215:1
position: 37215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36247-37215:1:exon

AL022_RS04080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04080
old locus tag: CAHE_p0039
old locus tag: RI14_RS04060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934702.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MEKITPKVDLAFKKIFGVEENKDLLIELINATVSPADQVVDVTLLNPYNPKNFRSDKLSILDIKAISETGKRFNIEIQITDEADYDKRALYYWAKLYTDQLKVSEGYSKLNKAIGIHILNFISIADNKKYHNVFRITEKESGISYFHDLELHTIELTKFSKDPDENLTSLLEKIKTSLDIWTAFLTRHDLLNKDNLPGPLAIPSLKKALHVLDTLNFTDEERMAYEDHLKWLLIEAXTVEKYRQEGEEKGRQEGREEGRQEGREEGRQEGREEGRQEGIRIGEEKGEKEKALSIAKAMLLKGYSMEEITILTGLSKTDIQSL
SIO_010081: AL022_RS04080
subclass of: SO_0000673
so part of: AL022_RS04080
location: 36247..37215
location: region:36247-37215:1
so has part: feature:36247-37215:1:exon

WP_014935017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36247-37215:1:exon

AL022_RS04085
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04085
old locus tag: CAHE_p0040
old locus tag: RI14_RS04065
pseudo: true
so part of: sequence
location: 37296..>37592
location: region:37296-37592:1
so has part: feature:37296-37592:1:exon
subclass of: SO_0000010

position:37296:1
position: 37296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37592:1
position: 37592
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37296-37592:1:exon

AL022_RS04085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04085
old locus tag: CAHE_p0040
old locus tag: RI14_RS04065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069623.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AL022_RS04085
subclass of: SO_0000673
so part of: AL022_RS04085
location: 37296..>37592
location: region:37296-37592:1
so has part: feature:37296-37592:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37296-37592:1:exon

AL022_RS04090
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04090
old locus tag: RI14_RS04070
pseudo: true
so part of: sequence
location: complement(37580..38812)
location: region:37580-38812:-1
so has part: feature:37580-38812:-1:exon
subclass of: SO_0000010

position:37580:-1
position: 37580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38812:-1
position: 38812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37580-38812:-1:exon

AL022_RS04090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04090
old locus tag: RI14_RS04070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934957.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS256 family transposase
SIO_010081: AL022_RS04090
subclass of: SO_0000673
so part of: AL022_RS04090
location: complement(37580..38812)
location: region:37580-38812:-1
so has part: feature:37580-38812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37580-38812:-1:exon

AL022_RS04095
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04095
old locus tag: CAHE_p0043
old locus tag: RI14_RS04075
so part of: sequence
location: complement(39003..39929)
location: region:39003-39929:-1
so has part: feature:39003-39929:-1:exon
subclass of: SO_0000010

position:39003:-1
position: 39003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39929:-1
position: 39929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39003-39929:-1:exon

AL022_RS04095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04095
old locus tag: CAHE_p0043
old locus tag: RI14_RS04075
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKFRITNIFFVILPFIFGCGYRSRYGVGFDPIDTNTNSINRSFAQYKLPYSNLTGKDIIAKALENRFIHDKDNNPLDIEKNNNLEEGLGYIFMNCLRFKLKVLENECKDVSHYVEWKDKCPKPWKYRTQVISNKEYGVFYLESVQMGEYYPNDKDSIVRNYDIVKNEPKKNRKSPYITVYYTDEETDKENKKRFDVPVEIDHLLRDNSYLIELPACLHKIKSKYLDPFLLYPTQTDRKGLHHNYWNNRKEFLDFKKNYDNSSSEVRCICGNPFKKPNEDFLEEHNHEDTWGDKWNANMQKKHIFSCSI
SIO_010081: AL022_RS04095
subclass of: SO_0000673
so part of: AL022_RS04095
location: complement(39003..39929)
location: region:39003-39929:-1
so has part: feature:39003-39929:-1:exon

WP_041546385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39003-39929:-1:exon

AL022_RS04100
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04100
old locus tag: CAHE_p0044
old locus tag: RI14_RS04080
so part of: sequence
location: complement(40012..40695)
location: region:40012-40695:-1
so has part: feature:40012-40695:-1:exon
subclass of: SO_0000010

position:40012:-1
position: 40012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40695:-1
position: 40695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40012-40695:-1:exon

AL022_RS04100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04100
old locus tag: CAHE_p0044
old locus tag: RI14_RS04080
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKILFYTLYISAYTGISACNKINMNKMHQEEPSTSETDEKAPSPKKPKREDKKAEKELPKAVRPEDKENLRKECVEMLNSLAKKELKASLPKDYIKFLVEYDIESLEKLAIDPFCIFSFKTPKSKENIENKSKQLMRRQIGLISVISIDEDQRKRLGIKNPWCIAVYNGEEEEEYKEYYYIDLDSKNNTIIYKQDRYSNLENIYKILPDFIKYCKEKSNDMKKYKK
SIO_010081: AL022_RS04100
subclass of: SO_0000673
so part of: AL022_RS04100
location: complement(40012..40695)
location: region:40012-40695:-1
so has part: feature:40012-40695:-1:exon

WP_041546387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40012-40695:-1:exon

AL022_RS04105
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04105
old locus tag: CAHE_p0046
old locus tag: RI14_RS04085
so part of: sequence
location: complement(40951..41658)
location: region:40951-41658:-1
so has part: feature:40951-41658:-1:exon
subclass of: SO_0000010

position:40951:-1
position: 40951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41658:-1
position: 41658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40951-41658:-1:exon

AL022_RS04105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04105
old locus tag: CAHE_p0046
old locus tag: RI14_RS04085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934985.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MTPITPKLFPYFKGFCSSPELILLFVYMKCRFSLSYRDLEEMMHMRGAKIDHSTLQRWVIKFIPLIDQEVRKRKRPVGSSWRMDETYVKLNGKWIYLYRAVDRYGDTVDFFLSDRRVKSAAFSFFRKAIRYNKTPYKVVVDKSGSNKAALDALNIELDQGHKIQIFQNKYLNNRVEQDHRFIKKRIKPMLGFKSFHSANITITGIENIRIIQKGQLIGSKKQASTFENFAKLMAE
SIO_010081: AL022_RS04105
subclass of: SO_0000673
so part of: AL022_RS04105
location: complement(40951..41658)
location: region:40951-41658:-1
so has part: feature:40951-41658:-1:exon

WP_014935024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40951-41658:-1:exon

AL022_RS04110
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04110
old locus tag: CAHE_p0047
old locus tag: RI14_RS04090
so part of: sequence
location: 41883..42857
location: region:41883-42857:1
so has part: feature:41883-42857:1:exon
subclass of: SO_0000010

position:41883:1
position: 41883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42857:1
position: 42857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41883-42857:1:exon

AL022_RS04110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04110
old locus tag: CAHE_p0047
old locus tag: RI14_RS04090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014935025.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS110 family transposase
translation: MKYIGIDIAKSSFVAAFPKGKGYTTATYKNDPNGIAIFLSKLDKCLDHCVLEATGNYGCLLVKMLLEADLSVSVINPKQIKHFTKVVNHITKTDEVDAELISLYGSKMEPKPYKMPLASIQALKQQKTLFAQLKKQLTMCYNLLESFSVLPKPDTVSLTMVKQTISYLEEQIVILEQQMLSITQETYQDLYKRISSIKGIGDRTTMELIVSTGGGNHFESAKQFSKYVGLAPIYEHSGSSVRKKGHINRHGNPQLRSLLYIASWSAIRFNKSCKDFYERLKERGKPGKVALIAVANKLIRQVFAIMRDHTFYVDGHLSKLKANP
SIO_010081: AL022_RS04110
subclass of: SO_0000673
so part of: AL022_RS04110
location: 41883..42857
location: region:41883-42857:1
so has part: feature:41883-42857:1:exon

WP_014935025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41883-42857:1:exon

AL022_RS04115
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04115
old locus tag: CAHE_p0049
old locus tag: RI14_RS04095
so part of: sequence
location: complement(43579..43914)
location: region:43579-43914:-1
so has part: feature:43579-43914:-1:exon
subclass of: SO_0000010

position:43579:-1
position: 43579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43914:-1
position: 43914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43579-43914:-1:exon

AL022_RS04115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04115
old locus tag: CAHE_p0049
old locus tag: RI14_RS04095
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKRQTIGENPLDSLIQPVSGNERSKSISDSNERFKYSVQKPPKSSKQRLTVQISKDVIERLKNAVYWTPGLTLASLAEEAFSKAIDRLESSRKSSFPRRDQELKTGRPLH
SIO_010081: AL022_RS04115
subclass of: SO_0000673
so part of: AL022_RS04115
location: complement(43579..43914)
location: region:43579-43914:-1
so has part: feature:43579-43914:-1:exon

WP_014935027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43579-43914:-1:exon

AL022_RS04120
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04120
old locus tag: CAHE_p0050
old locus tag: RI14_RS04100
so part of: sequence
location: complement(43917..44681)
location: region:43917-44681:-1
so has part: feature:43917-44681:-1:exon
subclass of: SO_0000010

position:43917:-1
position: 43917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44681:-1
position: 44681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43917-44681:-1:exon

AL022_RS04120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04120
old locus tag: CAHE_p0050
old locus tag: RI14_RS04100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006342452.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MEIIAILNQKGGSAKTTTSVNLGSTLAEQNKKVLLIDLDPQGSASIWLGFKNTSKGLYTVFTENVSILDIVDKTCVIGLDIIVSSPWLISADKALSGEVGAEMILKNNLHVIDKDIWDYVLIDCPPNLGIMSLNALTSAHKVLVPIETHIMAVQGLAQLLNTITTVKSRLNPSLEIGGILPCRVNIRTRLSKDILSDLRSRFGDQVYDTIIRESVKLAEAPSFGKPITMYDDKSPGACDYRSLSHEIIKRSKGK
SIO_010081: AL022_RS04120
subclass of: SO_0000673
so part of: AL022_RS04120
location: complement(43917..44681)
location: region:43917-44681:-1
so has part: feature:43917-44681:-1:exon

WP_014935028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43917-44681:-1:exon

AL022_RS04125
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04125
old locus tag: CAHE_p0051
old locus tag: RI14_RS04105
so part of: sequence
location: complement(44858..46345)
location: region:44858-46345:-1
so has part: feature:44858-46345:-1:exon
subclass of: SO_0000010

position:44858:-1
position: 44858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46345:-1
position: 46345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44858-46345:-1:exon

AL022_RS04125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04125
old locus tag: CAHE_p0051
old locus tag: RI14_RS04105
inference: COORDINATES: protein motif:HMM:NF017116.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VapE family protein
translation: MSAYSQGFINVISLQSENQMPSDDLLKSLRTRTSVLLSCYDNDQAGKNASKKLSDSYGIVSISLPEEVKDISNYFQKYNSANFQFLLDEGIRKSKSISIKPVTSAKVEKTVNTKRGRIESYLDSKFNFRFNVFTKDCQINIKGSSMWEKVNVDELSRNLDSYGIDCPIDLLQSTLRSFFVRRFNPIEEYFLSFEGKSFDSSKDYIRELSTYVHLKHPTSSNINYWYTHLKKWMIRAIRTLFNPDGINKHALILCSPREGMGKSYFCEFLCPLPIIKYYTASSNKYNEKDLQKALIRNFIINLEELHQLTASPEFIKGWLSQRYINVRFQFQEEETVACRIASFVGSSNSTSFLRPEIGYSRWICFEVGYIDFLDEEARNIVERSWEQAYHLYKLDERSGELSTDEVEELKTRSESFTTKSTEAELIVQYLSPSTKEEGEFMTATDILRYLQNIVGTTIRLNTKLIGSALRETGFDRVMYSDITRGPLYGYFVKRV
SIO_010081: AL022_RS04125
subclass of: SO_0000673
so part of: AL022_RS04125
location: complement(44858..46345)
location: region:44858-46345:-1
so has part: feature:44858-46345:-1:exon

WP_014935029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44858-46345:-1:exon

AL022_RS04130
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04130
old locus tag: CAHE_p0052
old locus tag: RI14_RS04110
so part of: sequence
location: complement(46355..47131)
location: region:46355-47131:-1
so has part: feature:46355-47131:-1:exon
subclass of: SO_0000010

position:46355:-1
position: 46355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47131:-1
position: 47131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46355-47131:-1:exon

AL022_RS04130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04130
old locus tag: CAHE_p0052
old locus tag: RI14_RS04110
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITKEKILEKAGGEANLIRHLVPTFNPNVRKKNYKSIFSEKDDKPSMSIFTDNQGKFLFKSFNTGHQGDAFQMWADFYGLDCTTQFKEVLAVINQEMCLGLDSDQDIKVIPKPVLPKLSLDKKPKFSLPSQTLSIEYIPSDSGSFISNLYLKYWLQYGITQSVLDHFDVRQVSYLSYVSNSGRSLCFKYESRNQIVSAYHISGRVKVYIPEISQSFSDDPSFKGQKKSFSYKNQTKEDVFGLSQLPEGTLEYILFLAR
SIO_010081: AL022_RS04130
subclass of: SO_0000673
so part of: AL022_RS04130
location: complement(46355..47131)
location: region:46355-47131:-1
so has part: feature:46355-47131:-1:exon

WP_014935030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46355-47131:-1:exon

AL022_RS04135
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04135
old locus tag: CAHE_p0053
old locus tag: RI14_RS04115
so part of: sequence
location: complement(47222..47596)
location: region:47222-47596:-1
so has part: feature:47222-47596:-1:exon
subclass of: SO_0000010

position:47222:-1
position: 47222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47596:-1
position: 47596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47222-47596:-1:exon

AL022_RS04135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04135
old locus tag: CAHE_p0053
old locus tag: RI14_RS04115
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKTGLRHCKEFAIDPFLTDECKVDISNVVMKLSRPALELMYYILNKKIFLNEKFVFDIADFKNFYNKKSNTSVIQSLGVLCFYNIIAKTTLSGVYWINRKVFSENKEMEFLENFFRVKGMKEN
SIO_010081: AL022_RS04135
subclass of: SO_0000673
so part of: AL022_RS04135
location: complement(47222..47596)
location: region:47222-47596:-1
so has part: feature:47222-47596:-1:exon

WP_014935031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47222-47596:-1:exon

AL022_RS04140
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04140
old locus tag: CAHE_p0055
old locus tag: RI14_RS04120
so part of: sequence
location: complement(48920..49561)
location: region:48920-49561:-1
so has part: feature:48920-49561:-1:exon
subclass of: SO_0000010

position:48920:-1
position: 48920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49561:-1
position: 49561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48920-49561:-1:exon

AL022_RS04140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04140
old locus tag: CAHE_p0055
old locus tag: RI14_RS04120
inference: COORDINATES: protein motif:HMM:NF024554.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: toprim domain-containing protein
translation: MGDKAVFALYRDLDKNGKGVMCSTISYQFDAKGSVSDDGLHNTSKYFQKGLPRGLSVLVDPNISVKAIVVTESPIDALSHKQIHKDDGRTMYISTCGSLSEGIKKELGTVLAHAKERGRSVTLAFDSDLAGRQIHKTVSELSHVNQVICKDSTPSRSKDWSQELLSILGNQEMLKTLQKELVSSEQEHELRKQKSKEPTVMGLELSLDRWEDR
SIO_010081: AL022_RS04140
subclass of: SO_0000673
so part of: AL022_RS04140
location: complement(48920..49561)
location: region:48920-49561:-1
so has part: feature:48920-49561:-1:exon

WP_014935033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48920-49561:-1:exon

AL022_RS04145
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04145
old locus tag: RI14_RS04125
pseudo: true
so part of: sequence
location: complement(49781..51000)
location: region:49781-51000:-1
so has part: feature:49781-51000:-1:exon
subclass of: SO_0000010

position:49781:-1
position: 49781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51000:-1
position: 51000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49781-51000:-1:exon

AL022_RS04145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04145
old locus tag: RI14_RS04125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934521.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AL022_RS04145
subclass of: SO_0000673
so part of: AL022_RS04145
location: complement(49781..51000)
location: region:49781-51000:-1
so has part: feature:49781-51000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49781-51000:-1:exon

AL022_RS04150
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04150
old locus tag: CAHE_p0058
old locus tag: RI14_RS04130
pseudo: true
so part of: sequence
location: <51089..51514
location: region:51089-51514:1
so has part: feature:51089-51514:1:exon
subclass of: SO_0000010

position:51089:1
position: 51089
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:51514:1
position: 51514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51089-51514:1:exon

AL022_RS04150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04150
old locus tag: CAHE_p0058
old locus tag: RI14_RS04130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_034576929.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: AL022_RS04150
subclass of: SO_0000673
so part of: AL022_RS04150
location: <51089..51514
location: region:51089-51514:1
so has part: feature:51089-51514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51089-51514:1:exon

AL022_RS04155
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04155
old locus tag: CAHE_p0059
so part of: sequence
location: 51644..52429
location: region:51644-52429:1
so has part: feature:51644-52429:1:exon
subclass of: SO_0000010

position:51644:1
position: 51644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52429:1
position: 52429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51644-52429:1:exon

AL022_RS04155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04155
old locus tag: CAHE_p0059
inference: COORDINATES: protein motif:HMM:NF024206.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ankyrin repeat domain-containing protein
translation: MNKKYTSHIQSSIVISGIAVCISFIITGCSQSNRYGMNSSSEKYLGKNKIEVKYKFITNKKDFGSPLHSASAYGDIEEARFYLNDKIIPVNNQNDYDNTPLHYAAGNDHLEVVKELIQHGANVNQKDMNECTPLHYAAQINNIEVVKKLVKHGANVNEKNINQHTPLYYSVKLGHEKVVKTLVKHTDNLNENDKYEYTFLHYSAELGNVGIVKILIKKGAKINELNHVLNTPLDLALEKGHTDVVNLLKKHGATSGHTTNQ
SIO_010081: AL022_RS04155
subclass of: SO_0000673
so part of: AL022_RS04155
location: 51644..52429
location: region:51644-52429:1
so has part: feature:51644-52429:1:exon

WP_014935037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51644-52429:1:exon

AL022_RS04465
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04465
old locus tag: CAHE_p0060
so part of: sequence
location: 52555..53115
location: region:52555-53115:1
so has part: feature:52555-53115:1:exon
subclass of: SO_0000010

position:52555:1
position: 52555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53115:1
position: 53115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52555-53115:1:exon

AL022_RS04465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04465
old locus tag: CAHE_p0060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENNIKNLLKITFLYSLIVVSLAFNCDSKVKKEVVKCKSSFVPNEKFENIKSTIKESIDKVEKKNKEEPIIGKEFSLPETKESRIPTPTTERPRTPIKESRIPTPTTERPRTPIKESRIPRPTTERPRTPIKESRIPRPTTERPRTPIKESRIPTPTTERPRTPIKKGAVLRKKLTLVIPNRSIVD
SIO_010081: AL022_RS04465
subclass of: SO_0000673
so part of: AL022_RS04465
location: 52555..53115
location: region:52555-53115:1
so has part: feature:52555-53115:1:exon

WP_014935038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52555-53115:1:exon

AL022_RS04430
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04430
old locus tag: CAHE_p0061
pseudo: true
so part of: sequence
location: <53152..53319
location: region:53152-53319:1
so has part: feature:53152-53319:1:exon
subclass of: SO_0000010

position:53152:1
position: 53152
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:53319:1
position: 53319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53152-53319:1:exon

AL022_RS04430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04430
old locus tag: CAHE_p0061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014935024.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: AL022_RS04430
subclass of: SO_0000673
so part of: AL022_RS04430
location: <53152..53319
location: region:53152-53319:1
so has part: feature:53152-53319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53152-53319:1:exon

AL022_RS04165
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04165
old locus tag: CAHE_p0062
old locus tag: RI14_RS04145
so part of: sequence
location: complement(54013..54948)
location: region:54013-54948:-1
so has part: feature:54013-54948:-1:exon
subclass of: SO_0000010

position:54013:-1
position: 54013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54948:-1
position: 54948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54013-54948:-1:exon

AL022_RS04165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04165
old locus tag: CAHE_p0062
old locus tag: RI14_RS04145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934702.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MDKITPKVDLAFKKIFGVEENKDLLIELINATVSREDQVVDVTLLNPYNPKNFRSDKLSILDIKAISETGKRFNIEIQITDEADYDKRALYYWAKLYTDQLKVSQGYSKLNKAIGIHILNFISIADNKKYHNVFRITEKESGIAYFHDLELHTIELTKFSKDPDENLTSLLKKIKTSLDIWTAFLTRHDLLNKDNLPGPLAIPSLKKALHVLDTLNFTDEERMAYEDHLKWLLIEANTVEKYRQEGEEKGRQEGREEGRQEGRQEGIRIGEEKGEKEKALSIAKAMLLKGYSMEEITILTGLSKTDIQDIM
SIO_010081: AL022_RS04165
subclass of: SO_0000673
so part of: AL022_RS04165
location: complement(54013..54948)
location: region:54013-54948:-1
so has part: feature:54013-54948:-1:exon

WP_014935040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54013-54948:-1:exon

AL022_RS04170
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04170
old locus tag: CAHE_p0063
old locus tag: RI14_RS04150
pseudo: true
so part of: sequence
location: complement(55082..>55421)
location: region:55082-55421:-1
so has part: feature:55082-55421:-1:exon
subclass of: SO_0000010

position:55082:-1
position: 55082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55421:-1
position: 55421
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55082-55421:-1:exon

AL022_RS04170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04170
old locus tag: CAHE_p0063
old locus tag: RI14_RS04150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934985.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: AL022_RS04170
subclass of: SO_0000673
so part of: AL022_RS04170
location: complement(55082..>55421)
location: region:55082-55421:-1
so has part: feature:55082-55421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55082-55421:-1:exon

AL022_RS04175
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04175
old locus tag: CAHE_p0064
old locus tag: RI14_RS04155
so part of: sequence
location: complement(55428..56645)
location: region:55428-56645:-1
so has part: feature:55428-56645:-1:exon
subclass of: SO_0000010

position:55428:-1
position: 55428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56645:-1
position: 56645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55428-56645:-1:exon

AL022_RS04175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04175
old locus tag: CAHE_p0064
old locus tag: RI14_RS04155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014934521.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MGRKKVRKFSSVEKTKIVLDLLKEELTLVELSSKYGVTSKTLQNWKHQFMEHAYLAFDPSKVVSAYKDEIAHLKDENDSLAKTLGKTTVERDWAVGKLKSLDLLSKKGLVESKLTHLXKARQCKLLSINRSFLYYKSSIEDSFNKELINKIADIYIDHPEYGYRYIYNQLLEDGLSIGKNRVLHYMRRMGLCAVYPRKKVFTSFKSSKYKAHGYLLDKYWFSSGQTRRLYVPKSNQVWSGDITYIKTNNGFIYFAAIIDWHSKAILSYKVSNSMDTTLVTDILEEALSKYPAPEYFNSDHGSQYTSHGHIQLLKKYGIKISMNGQGRSIDNVVIERFFRTIKYNCLFINDFKNIKEIKQGINDYMHKYNYNRFHSSIKYQKPMNVYLTHVKNQYAKAEITRKQNL
SIO_010081: AL022_RS04175
subclass of: SO_0000673
so part of: AL022_RS04175
location: complement(55428..56645)
location: region:55428-56645:-1
so has part: feature:55428-56645:-1:exon

WP_014935042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55428-56645:-1:exon

AL022_RS04180
type: Gene
subclass of: SO_0000704
RO_0002162: 1231626
locus tag: AL022_RS04180
old locus tag: CAHE_p0065
old locus tag: RI14_RS04160
so part of: sequence
location: 56735..57724
location: region:56735-57724:1
so has part: feature:56735-57724:1:exon
subclass of: SO_0000010

position:56735:1
position: 56735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57724:1
position: 57724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56735-57724:1:exon

AL022_RS04180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1231626
locus tag: AL022_RS04180
old locus tag: CAHE_p0065
old locus tag: RI14_RS04160
inference: COORDINATES: protein motif:HMM:NF033543.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256 family transposase
translation: MTDNGVISVEVPRDRSSSFEPVLLPKRQTRIPGLDDKILSLYAKGMSLSDIQLQIQELYGAEVSESLISNITDSVIEDVKIWQNRPLETVYPIVFFDCFVVKVRQDKRIINKSVYVALGIDRLGIKDVLGLWMSENEGSKFWLGNLTELKNRGMQDMLIACTDNLSGMSEAISAVYPKTDHQLCIVHQIRNSLKYVSYKDRKSLSADLKPIYTSVNEEEALMALETFANKWDKQHPQIANSWYANWNNLMLFLQYPNAIRRVIYTTNIVESVNSQFRRVTKNKRVFPNDLAVFKTLYLTINYMTRKWTMPIHSWSEAIAHFLIKFEHRI
SIO_010081: AL022_RS04180
subclass of: SO_0000673
so part of: AL022_RS04180
location: 56735..57724
location: region:56735-57724:1
so has part: feature:56735-57724:1:exon

WP_256364579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56735-57724:1:exon