Salimicrobium jeotgali strain MJ3 plasmid pSJ25, complete sequence.
type: Entry
definition: Salimicrobium jeotgali strain MJ3 plasmid pSJ25, complete sequence.
sequence version: NZ_CP011363.1
sequence date: 2023-04-28
sequence: sequence
division: CON
label: NZ_CP011363.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN03571250
keyword: RefSeq
source: Salimicrobium jeotgali
organism: Salimicrobium jeotgali
taxonomy: Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Salimicrobium.
reference: 1
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP011363.2.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP v. 3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 291.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/28/2023 01:03:39\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,842\nCDSs (total) :: 2,747\nGenes (coding) :: 2,724\nCDSs (with protein) :: 2,724\nGenes (RNA) :: 95\nrRNAs :: 7, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 7, 7, 7 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 4\nPseudo Genes (total) :: 23\nCDSs (without protein) :: 23\nPseudo Genes (ambiguous residues) :: 0 of 23\nPseudo Genes (frameshifted) :: 8 of 23\nPseudo Genes (incomplete) :: 12 of 23\nPseudo Genes (internal stop) :: 8 of 23\nPseudo Genes (multiple problems) :: 5 of 23\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 25530
topology: circular
so has quality: SO_0000988
location: 1..25530
location: region:1-25530:1
RO_0002162: 1230341

NZ_CP011363
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN03571250
type: BioSample
SIO_000068: biosample

1
title: Salimicrobium jeotgali MJ3, isolated from Myulchi jeot, a traditional Korean fermented seafood
author: Kim, K.H.
author: Jeon, C.O.
author: Jin, H.M.
journal: Unpublished

2
title: Direct Submission
author: Kim, K.H.
author: Jeon, C.O.
author: Jin, H.M.
journal: Submitted (22-JUN-2015) Life Science, Chung-Ang University, 104-603, Chungang Univ, Seoul 156-756, South Korea
comments: Sequence update by submitter

3
title: Direct Submission
author: Kim, K.H.
author: Jeon, C.O.
author: Jin, H.M.
journal: Submitted (01-MAY-2015) Life Science, Chung-Ang University, 104-603, Chungang Univ, Seoul 156-756, South Korea

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25530:1
position: 25530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25530:1:source
so part of: sequence
organism: Salimicrobium jeotgali
mol type: genomic DNA
strain: MJ3
isolation source: fermented anchovy (Engraulis japonica) food
culture collection: KACC:16972
type material: type strain of Salimicrobium jeotgali
plasmid: pSJ25
country: South Korea: Seoul
collection date: 2012-02

1230341
type: Taxonomy
SIO_000068: taxonomy

AAV35_RS14105
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14105
old locus tag: AAV35_013990
so part of: sequence
location: complement(145..363)
location: region:145-363:-1
so has part: feature:145-363:-1:exon
subclass of: SO_0000010

position:145:-1
position: 145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363:-1
position: 363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145-363:-1:exon

AAV35_RS14105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14105
old locus tag: AAV35_013990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008591923.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYIYQRISYDGSSWRSKSIDTESLFDEDPYRNQTLPGKEVRFTHEPVDGDYDRLCEALSGEVVIFTISENMN
SIO_010081: AAV35_RS14105
subclass of: SO_0000673
so part of: AAV35_RS14105
location: complement(145..363)
location: region:145-363:-1
so has part: feature:145-363:-1:exon

WP_008591579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145-363:-1:exon

AAV35_RS14110
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14110
old locus tag: AAV35_013995
so part of: sequence
location: complement(439..705)
location: region:439-705:-1
so has part: feature:439-705:-1:exon
subclass of: SO_0000010

position:439:-1
position: 439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705:-1
position: 705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439-705:-1:exon

AAV35_RS14110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14110
old locus tag: AAV35_013995
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKKQPKDFLRNKTAQIAREMKGEDQLHITSCILQKNGDRYVTVRDIASLDETPPTYIYSLIPFEEDPDVQEFFVRHKRLIESGFYDG
SIO_010081: AAV35_RS14110
subclass of: SO_0000673
so part of: AAV35_RS14110
location: complement(439..705)
location: region:439-705:-1
so has part: feature:439-705:-1:exon

WP_040609675.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439-705:-1:exon

AAV35_RS14115
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14115
old locus tag: AAV35_014000
so part of: sequence
location: complement(835..1419)
location: region:835-1419:-1
so has part: feature:835-1419:-1:exon
subclass of: SO_0000010

position:835:-1
position: 835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419:-1
position: 1419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835-1419:-1:exon

AAV35_RS14115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14115
old locus tag: AAV35_014000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018394549.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MKQTAKNVQPLRSKEEIEEMKFALKRGGTGRKKSEAKAARDVLLFLLGINTGLRISDLLRLQVSHVRDRDFFYLIEKKTGKKREVNVRALRSELGAYIAGKGADTYLFSSQKGGMPISTVQAYRILADAAAFVGRDDVGTHTLRKTFGYHYYKATKDVAMLQDIFNHSSPKETKLYIGIRQEEIRESLVGFRLG
SIO_010081: AAV35_RS14115
subclass of: SO_0000673
so part of: AAV35_RS14115
location: complement(835..1419)
location: region:835-1419:-1
so has part: feature:835-1419:-1:exon

WP_008591575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:835-1419:-1:exon

AAV35_RS14120
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14120
old locus tag: AAV35_14250
so part of: sequence
location: complement(1612..2415)
location: region:1612-2415:-1
so has part: feature:1612-2415:-1:exon
subclass of: SO_0000010

position:1612:-1
position: 1612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2415:-1
position: 2415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1612-2415:-1:exon

AAV35_RS14120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14120
old locus tag: AAV35_14250
inference: COORDINATES: protein motif:HMM:NF025713.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: abortive infection family protein
translation: MKVIDCLEKVKQDIFDDLDEYYSRGSNMFNEEPDDENYKEARLIIKRLANEAGKRVPSFIEDGRTVREAVESAVYESETNSGSVLALRNYLGRSINEFTDYAEDKKVEVELTYIESQFPSKLTYTTIKSSLVSCEQRLEKGDYSGAVTSARTLVEGVCKEILTHFPEVEIKDNITLPQLFKKVQQNLNLAPNDETLERNLKDVLNGLIKIVNGIAEVRNKYGDAHPPKNLIMEHHAKLVVNSSKTVIDFLFKTYEYQNERGTLKKNS
SIO_010081: AAV35_RS14120
subclass of: SO_0000673
so part of: AAV35_RS14120
location: complement(1612..2415)
location: region:1612-2415:-1
so has part: feature:1612-2415:-1:exon

WP_008591572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1612-2415:-1:exon

AAV35_RS14125
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14125
old locus tag: AAV35_014010
so part of: sequence
location: complement(2596..5706)
location: region:2596-5706:-1
so has part: feature:2596-5706:-1:exon
subclass of: SO_0000010

position:2596:-1
position: 2596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5706:-1
position: 5706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2596-5706:-1:exon

AAV35_RS14125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14125
old locus tag: AAV35_014010
EC number: 3.1.21.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008634266.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0009035 - type I site-specific deoxyribonuclease activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease subunit R
translation: MSGFSEDELEQATLELFEEMEFEVAFGPDLAPEGSDPERPNYQTVVLEYRLYNALTTINPEAQPAQIEEAMRQVTTAKHPNLLMNNRDFHRFLTDGIDVTTAQAGEEERTEKLWLMDPDKADNNDFLAVNQFTVVEGRHDKRPDVVVFINGLPVVVFELKSSSNEHVGLPEAYNQLQTYKATIPSLFQTNAFLVTSDGLNARAGTLTASEEWFTMWRSVDGEAIAPKGMPQIEVLIRGMFQKRTLLDIIHHFVLFQEDDQSLVKILAAYHQYYAVNKAMAQTGRAISEEGDRKIGVIWHTQGSGKSLSMVFYSGKLILGADNPTIVVLTDRNDLDEQLYTTFSQSSALLRQKPKQAESRKHLKELLSVDSGGVVFTTMHKFAPDGEDESLETFTSRTNVIVMADEAHRSQYGFEAEVQNKRGKAKLKYGFAKYLRDALPNASFIGFTGTPVELEDKNTPAVFGNYIDVYDMTQAVEDGATVRIYYESRIIQLDMPKDNQLDVDSELEDLTEDQEFEDREKLKSKWSRLEALAGAESRVKRMAQDIVEHYEKRQGAIDGKAMAVVMSRRIAIDLYQEITRLRPDWHSDDDDKGVIKVVMTGNSSDPEGWHQHTGNKRHRDYLAKRMKDNEDPLKIVIVRDMWLTGFDVPSMHTMYIDKPMKGHNLMQAIARVNRVFRDKPGGLVVDYIGFADNLKEALKQYTEEDKKNAGVDTSLAAEIMQEKYELLTSMLHGHDYQKFYSEKQTERMQAIVETVDVVLAMQEEQKKDFLRLVTELSKAYALCATTEEAQALNAEVGFFKSVKSGVIKLLPEGTQKKTAAQIDDQINQLISKSIISEEVVDVYGSLGLENPDISILSDHFLKEVEEIPQKNIAVELLNRLLQGKIKNIQRKNLVQSKKFSELLENALNKYNKRAIEASKVIEELIELAKQVNDAYQRGEESNLSDDEIAFYDALASNESAQEVMGDETLQAIAHELTKSIKANMSIDWNLRESARAKMRTTVKHLLRRYGYPPDLQKMAVDTVVQQAELMATNEKID
SIO_010081: AAV35_RS14125
subclass of: SO_0000673
so part of: AAV35_RS14125
location: complement(2596..5706)
location: region:2596-5706:-1
so has part: feature:2596-5706:-1:exon

WP_008591570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2596-5706:-1:exon

AAV35_RS14130
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14130
old locus tag: AAV35_14255
so part of: sequence
location: complement(5690..6964)
location: region:5690-6964:-1
so has part: feature:5690-6964:-1:exon
subclass of: SO_0000010

position:5690:-1
position: 5690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6964:-1
position: 6964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5690-6964:-1:exon

AAV35_RS14130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14130
old locus tag: AAV35_14255
EC number: 3.1.21.-
inference: COORDINATES: protein motif:HMM:NF013579.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MKYELKDLIESISQKHSFSKDRVIFLNTSDVVDGKILHNTYSSTSELPGQAKKTIKEKDILFSEIRPKNKRFVLVEDLKEPVEDYVVSTKLMVIRVKDSHVLNQKFLYYYLTEKRIIDYLQNSAESRSGTFPQITFDDIKHLSIELPTIDKQMKIVNTIESFTKKLETNNQIISNLEQLAQTLFKRWFIDFEFPNEDGKPYRSSGGKMVESELGLIPEGWEVLILEDISESPIVCGKTPSTKIKENYGSEMPFITIPDMHNSTFIQTTEKYLSKKGAESQPKKTLPPLSICVSCIATPGLVSITSEKSQTNQQINSLIPSKVDVFYTYLYLSRKSQLIRELGSGGSTTLNLNKTQFSKVPILYPSQSIREEFHQQISPLFNEINNLQKQSFKLAQLRDNLLPKLLSGELELNEETEVTENVGVQ
SIO_010081: AAV35_RS14130
subclass of: SO_0000673
so part of: AAV35_RS14130
location: complement(5690..6964)
location: region:5690-6964:-1
so has part: feature:5690-6964:-1:exon

WP_008591568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5690-6964:-1:exon

AAV35_RS14135
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14135
old locus tag: AAV35_014020
so part of: sequence
location: complement(6954..8489)
location: region:6954-8489:-1
so has part: feature:6954-8489:-1:exon
subclass of: SO_0000010

position:6954:-1
position: 6954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8489:-1
position: 8489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6954-8489:-1:exon

AAV35_RS14135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14135
old locus tag: AAV35_014020
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008634270.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent DNA methyltransferase
translation: MSTQETSANIGYEEKLWQMADKLRGSMDAAEYKHVVLGLLFLKYVSDSFEELHEKLKEDDYADEEDRDEYLAENVFWVPKEARWENLKANAKQPEIGQLVDTAMIEIEKENGSLKGILPKIYARPDLDKRRLGETIDLFSTIKVGDDKSKASDVLGRVYEYFLAQFASAEGKNGGEFYTPRSIVQLLVEMIEPYKGRIYDPCCGSGGMFIQSEKFVENHQGKLGDIAVYGQESNPTTWRLCKMNLAIRGIDSNLGGEHADTFHKDLHKNLKADYILANPPFNISDWGGGRLLEDARWRFGIPPQGNANYAWIQHMVSKLAPSGTAGFVLANGSMSTSQTSELQIRKNLVDNDLVECIVTLPGQLFYSTQIPVSLWFVTRNKAARGQRNRQGETLFIDARKLGFMADRTHKEFSDADIKKITDAFHAWRGTNEQEYEDVLGFSKAATLEEIQKHEYILTPGRYVGLEAEEDDAEPFEEKMDRLTGGLAEQFAKSKNLEDEIRQTLREIGYEI
SIO_010081: AAV35_RS14135
subclass of: SO_0000673
so part of: AAV35_RS14135
location: complement(6954..8489)
location: region:6954-8489:-1
so has part: feature:6954-8489:-1:exon

WP_008591566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6954-8489:-1:exon

AAV35_RS14140
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14140
old locus tag: AAV35_014025
so part of: sequence
location: complement(8515..8970)
location: region:8515-8970:-1
so has part: feature:8515-8970:-1:exon
subclass of: SO_0000010

position:8515:-1
position: 8515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8970:-1
position: 8970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8515-8970:-1:exon

AAV35_RS14140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14140
old locus tag: AAV35_014025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVISQRDFYCGLALTQMMEPGKSLELLERSHSTVLLVCNKNTKDEKTLYMKYRSTPETGTDSTWNFTFTPEEMKRVQHFQQKYPNLSFLFVCGKKDWPKSDIAIFSVKQAMTCLHPFYERPSYRISIRKKSGGRKMEMYGTGVCKSKAVRI
SIO_010081: AAV35_RS14140
subclass of: SO_0000673
so part of: AAV35_RS14140
location: complement(8515..8970)
location: region:8515-8970:-1
so has part: feature:8515-8970:-1:exon

WP_008591564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8515-8970:-1:exon

AAV35_RS14145
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14145
old locus tag: AAV35_014030
so part of: sequence
location: complement(9018..10916)
location: region:9018-10916:-1
so has part: feature:9018-10916:-1:exon
subclass of: SO_0000010

position:9018:-1
position: 9018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10916:-1
position: 10916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9018-10916:-1:exon

AAV35_RS14145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14145
old locus tag: AAV35_014030
inference: COORDINATES: protein motif:HMM:NF014442.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: N-6 DNA methylase
translation: MTNTEIGKIVEKALLSLSGIENSTKRLEIAMEHFTLLYAEKCSDSLKEEGWSVITRDGYHLKNNLIAVMTKTEETFPELNGVFDKQRVRKMDETVLFAFTSTLRSLSHSSIENIREAVNQLLANVLEGGRMGGELVTPDSVNTLITQLVDVTGGEVYDGTAGVGKLLLEAHAYAARKNEEVEVFAQDINTTMARVGTMHLFIKGVKKSTYKEGDTLTHPQYVTSEGLRRFDYVLMNFPFGFHWHPEKVKNELYGRFLYGIPPKQSGDLAFMLHGLASMKETGRGAFLVPHGALFRGGKEQRIREELIQSDVIEGIIGLPENLFAHTAIPSALILVNRNKDASRRGKIFFMDASHRFQKERRRNYLSEEDIETIVDSFREGRETPGFSIFVSITDIEEGSLAIQRYFDVDDVDSHLGVVTVNSKLFRDSFIPKKELQQVADIYRGLNMPSKSQAKDGGTSYKVIQLTDVQNGEILWDQLQTIQVKDRRKAQQYLIREGDLILSARGSAIKTAEVPEVPEEVILSHNFVGLRPYEGTTSSYLKAYLESPLGLYYLTSIQKGSSVKVISIKDIKSVFVPDPPVETKNQIGQELRKEERKYREAVRQAELDLQEGYKKMYQDMGIGKVFEKTEPSS
SIO_010081: AAV35_RS14145
subclass of: SO_0000673
so part of: AAV35_RS14145
location: complement(9018..10916)
location: region:9018-10916:-1
so has part: feature:9018-10916:-1:exon

WP_008591562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9018-10916:-1:exon

AAV35_RS14150
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14150
old locus tag: AAV35_014035
so part of: sequence
location: complement(10948..11271)
location: region:10948-11271:-1
so has part: feature:10948-11271:-1:exon
subclass of: SO_0000010

position:10948:-1
position: 10948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11271:-1
position: 11271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10948-11271:-1:exon

AAV35_RS14150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14150
old locus tag: AAV35_014035
inference: COORDINATES: protein motif:HMM:NF021593.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2325 domain-containing protein
translation: MKVLLVGGTNKNSWDKKARALGIQIMQQIEQKKEREMKAFLRKNIPEADVVIICISACSHSAMWEAKKVAKECGTPIRYTPGKGASKTFHEALQAGNNKHTFLNDDV
SIO_010081: AAV35_RS14150
subclass of: SO_0000673
so part of: AAV35_RS14150
location: complement(10948..11271)
location: region:10948-11271:-1
so has part: feature:10948-11271:-1:exon

WP_008591560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10948-11271:-1:exon

AAV35_RS14515
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14515
so part of: sequence
location: 12513..12659
location: region:12513-12659:1
so has part: feature:12513-12659:1:exon
subclass of: SO_0000010

position:12513:1
position: 12513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12659:1
position: 12659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12513-12659:1:exon

AAV35_RS14515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14515
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVCRHQDDFVVLVVMLAHHADFRFHAEELGETVGEVVDAIRLCRHYRI
SIO_010081: AAV35_RS14515
subclass of: SO_0000673
so part of: AAV35_RS14515
location: 12513..12659
location: region:12513-12659:1
so has part: feature:12513-12659:1:exon

WP_156330901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12513-12659:1:exon

AAV35_RS14155
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14155
old locus tag: AAV35_014040
so part of: sequence
location: complement(13097..13339)
location: region:13097-13339:-1
so has part: feature:13097-13339:-1:exon
subclass of: SO_0000010

position:13097:-1
position: 13097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13339:-1
position: 13339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13097-13339:-1:exon

AAV35_RS14155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14155
old locus tag: AAV35_014040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020493816.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MAHVYKWENSLAVRLPEAIVEELDIKEGSDVTFRLEDGKIVMTPGTAEITLKELLSEAEGKENPHLEMDFFGEPMGKEFS
SIO_010081: AAV35_RS14155
subclass of: SO_0000673
so part of: AAV35_RS14155
location: complement(13097..13339)
location: region:13097-13339:-1
so has part: feature:13097-13339:-1:exon

WP_008591599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13097-13339:-1:exon

AAV35_RS14160
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14160
old locus tag: AAV35_014045
so part of: sequence
location: 13536..14537
location: region:13536-14537:1
so has part: feature:13536-14537:1:exon
subclass of: SO_0000010

position:13536:1
position: 13536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14537:1
position: 14537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13536-14537:1:exon

AAV35_RS14160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14160
old locus tag: AAV35_014045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002507026.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTLVMYALVLLSTLFTLGCADEEAASTPEQPAETEEVASEETTQEEKPEPQEEKEETQTSDTPTESTEEVVEASEEAENPEVQESSKEAEKDLFSGYERIDVDGGDQSGDRASRVVVDIGHGDREYWAFTNEHGQLIKVLAEEIIPQDDASEPVLSNGRYFWDEAKVPGVESDTLDEGHVIADSLGGVSNAYNITPQESTLNRHGDQAYLEDAIRNAGGATDFEAIITYPSTDTQIPSHYQYTYTIMGNEVVDSFDNVNPDEVNESLNETTEDPPEEPASQENGEVSEVDTNGNGQVTIAEAEDAGYSMPIVEGHWLYPYMRDNNGNGMVGE
SIO_010081: AAV35_RS14160
subclass of: SO_0000673
so part of: AAV35_RS14160
location: 13536..14537
location: region:13536-14537:1
so has part: feature:13536-14537:1:exon

WP_008591596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13536-14537:1:exon

AAV35_RS14165
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14165
old locus tag: AAV35_014050
so part of: sequence
location: complement(14638..17007)
location: region:14638-17007:-1
so has part: feature:14638-17007:-1:exon
subclass of: SO_0000010

position:14638:-1
position: 14638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17007:-1
position: 17007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14638-17007:-1:exon

AAV35_RS14165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14165
old locus tag: AAV35_014050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKRRAVKKRKMHNKKSKKGNKKIKKFNKQKKQKHISSPNDMVSNANLYEIQNPFQDFTQEERNELLLKSSKNSEQTFEESLKELKELLLPLDTTSLISVFSMYYLSTPEGVHIPDDEHEIYQHHIELLQALSLQIPLTEKKEFKPVLPEDIEKITEVIKKISVSFTSMRMKNLIGKTDEESKKLLLLENMRAHTLAVRNIAYPSQIIETMHQIFSPIEKDFYQNTSLKIGSLIKMILNIIELITQKMNEHIAKVRNVYSSIDKTQMIDSYLKEFSTIENTREELLAFSSNFSKEDLFAMMISHSDTFVRDVYTLSVDDFVNNYPDPDVDLSSLNEILESWSYDVGDLRDSKTEHFLLANPTWRKPLIKERENHYSFPIPSMFFEYGIKIIEQAVENYPETLKKYHNSRGKVLEDRLELLFKSAFPEANIYKGSLWWDEEENKEFENDLLVLVDSYAIVIEAKAGTISDSARRGAPQRLQREVKELLVDPSTQAKRFSNHLHLNKGATIELNTKGTSKNKINLDETEKIITLGVTIELFGSLGNKQKELVEAGFIDDVQLISPSIPINDLEIIFDALETSSEKLHYISKREYIEKDVNYSGDELDLLSFYMQTGFNIDGNQIGSNFLQLTSNSEELDPYYMEKYALETVSNPNQKKPKPRRTTWWNDIIKKLDTEKRKKWTIISNTLLELSYEEQKKFERAVHKIKKAARKGRDNNNDNVVVMGTGSKEKKSILVGIAFKGLSEEERKDVIESTMADILYEMGYSQASFIGFDIDNDVHPYGTLGLASI
SIO_010081: AAV35_RS14165
subclass of: SO_0000673
so part of: AAV35_RS14165
location: complement(14638..17007)
location: region:14638-17007:-1
so has part: feature:14638-17007:-1:exon

WP_062838375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14638-17007:-1:exon

AAV35_RS14170
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14170
old locus tag: AAV35_014055
so part of: sequence
location: complement(17706..18191)
location: region:17706-18191:-1
so has part: feature:17706-18191:-1:exon
subclass of: SO_0000010

position:17706:-1
position: 17706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18191:-1
position: 18191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17706-18191:-1:exon

AAV35_RS14170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14170
old locus tag: AAV35_014055
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKFEPEPLLVKINLGGRESFYLKEDEKCYFYQEDVSWYEYAAQYNAFDCIASGALYVTDRQVLLYDPGFSNIWTKLSKDGDYPKQVLTRKFSSIVNQTWNMSIGRGHLKGPVLECIGRDCWLPPSQRKYKNRKNPIVSKYRRMDNMVEIIIRLKILNERR
SIO_010081: AAV35_RS14170
subclass of: SO_0000673
so part of: AAV35_RS14170
location: complement(17706..18191)
location: region:17706-18191:-1
so has part: feature:17706-18191:-1:exon

WP_008591592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17706-18191:-1:exon

AAV35_RS14175
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14175
old locus tag: AAV35_014060
so part of: sequence
location: complement(18521..20023)
location: region:18521-20023:-1
so has part: feature:18521-20023:-1:exon
subclass of: SO_0000010

position:18521:-1
position: 18521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20023:-1
position: 20023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18521-20023:-1:exon

AAV35_RS14175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14175
old locus tag: AAV35_014060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008591710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primase C-terminal domain-containing protein
translation: MQTPANIFAFITHQSLSTYKRMHSRAPLPARREAEKNDRQKQGVVFVSRSKDELQEARGHVVTSYETLQDQQRQLTHWTPNTFLWGSYTDRRKRILRGHRKNNLKQINTIVLDIDTKQTDLYALFLGCSEENLPDPSLIVETPRGYHVYFVLEEPIFISPSTGYQALEVAERIADNMKQALGAHVPIDTACNPFGFFRMPTADNIRYQSETKASVPKLIAWSQSYEQRQQRSALHVVHGGAQPRQIDQAWYQTLLQCRHITSGYYTSSRNNALLTLALANYASGRSYAEAYDELDEFNSRLEQPLSLQEFRRTMNSAYSGSYQGPKRTYIDMLLMQWTGEASTDAYGSGWYKFKKDRSERQRSHYEEWETDILRYLELHTSTTCAEELFLEGSQVYLAEQFGMAVSTLKEVLKRSNKLVKIVKGRGRGQRTYLASRAVVFAYLLYVRQAQVVHATTWKAMIEEMVTEAPFPVNLLLAETQEAFTRWITRVEQHFRTSWIC
SIO_010081: AAV35_RS14175
subclass of: SO_0000673
so part of: AAV35_RS14175
location: complement(18521..20023)
location: region:18521-20023:-1
so has part: feature:18521-20023:-1:exon

WP_008591590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18521-20023:-1:exon

AAV35_RS14180
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14180
old locus tag: AAV35_014065
so part of: sequence
location: complement(20720..21316)
location: region:20720-21316:-1
so has part: feature:20720-21316:-1:exon
subclass of: SO_0000010

position:20720:-1
position: 20720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21316:-1
position: 21316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20720-21316:-1:exon

AAV35_RS14180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14180
old locus tag: AAV35_014065
inference: COORDINATES: protein motif:HMM:NF024803.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MKLYSPSDIADILGLQASTLRKYSAALEKHGYTFDKNNRGQRFYTDSDVITLRKFISLKDSGMSLNEALEGTVMWHKGGEDVSPPVTETRSATERSYSDVSELKEMVHKQQESIEQLVRHNQELLRHIEQRDARIMELFEDNTATSLQSSAIAGVSQEELNEELQKRDEEEETPEDEHETEQVPEEKKKSWIAKLFNR
SIO_010081: AAV35_RS14180
subclass of: SO_0000673
so part of: AAV35_RS14180
location: complement(20720..21316)
location: region:20720-21316:-1
so has part: feature:20720-21316:-1:exon

WP_008591588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20720-21316:-1:exon

AAV35_RS14185
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14185
old locus tag: AAV35_014070
so part of: sequence
location: complement(21655..22047)
location: region:21655-22047:-1
so has part: feature:21655-22047:-1:exon
subclass of: SO_0000010

position:21655:-1
position: 21655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22047:-1
position: 22047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21655-22047:-1:exon

AAV35_RS14185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14185
old locus tag: AAV35_014070
inference: COORDINATES: protein motif:HMM:NF024803.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MerR family transcriptional regulator
translation: MRKYRPAELARILGISKTALRTYSGNFEDCGYEFEKNSQGHRFYSEKDVSVLRKFIDLKGNGNSRTRSETVKKTLDWEKSLTSDKDKKRRGARSDSLDANELKIIIEKLSENNSTLIRQNQELIQELIKK
SIO_010081: AAV35_RS14185
subclass of: SO_0000673
so part of: AAV35_RS14185
location: complement(21655..22047)
location: region:21655-22047:-1
so has part: feature:21655-22047:-1:exon

WP_008591587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21655-22047:-1:exon

AAV35_RS14190
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14190
old locus tag: AAV35_014075
so part of: sequence
location: complement(22379..22660)
location: region:22379-22660:-1
so has part: feature:22379-22660:-1:exon
subclass of: SO_0000010

position:22379:-1
position: 22379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22660:-1
position: 22660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22379-22660:-1:exon

AAV35_RS14190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14190
old locus tag: AAV35_014075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008587656.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKDLTRTEDIVKELPEAEEFFHGIGAILGRAVFAARMEASFTQKELAEKAGVDLKTVTRAEGGSGVLEVRMFDKLFRALGISSREYAALFGHS
SIO_010081: AAV35_RS14190
subclass of: SO_0000673
so part of: AAV35_RS14190
location: complement(22379..22660)
location: region:22379-22660:-1
so has part: feature:22379-22660:-1:exon

WP_008591584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22379-22660:-1:exon

AAV35_RS14195
type: Gene
subclass of: SO_0000704
RO_0002162: 1230341
locus tag: AAV35_RS14195
old locus tag: AAV35_014080
so part of: sequence
location: complement(22941..25490)
location: region:22941-25490:-1
so has part: feature:22941-25490:-1:exon
subclass of: SO_0000010

position:22941:-1
position: 22941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25490:-1
position: 25490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22941-25490:-1:exon

AAV35_RS14195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1230341
locus tag: AAV35_RS14195
old locus tag: AAV35_014080
inference: COORDINATES: protein motif:HMM:NF019313.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KAP family NTPase
translation: MRKYTDILTKVLFLSSILFIFIVFVEKKMAIFDLPNIFLKLNEYWYTYPLFIIIIIFSIVELVRGGFIKNLFKRPVLTYKFDYWVLALLVCFLGYWVSYEFGLVEGKFISLYYVASIAVLLIYILISFLKPCFMDKTQKANTESTKGIFFDQPIYYESEDKYNRNSLATRLTEMLSANSEKESLVVGLYGKWGSGKTSVFNLIKSKINSKKNNDLISISFNPWYFKDGEQLISQFFNSFINELNKSSEGNNKELIKNLKRYSEKLTPITIKTGLINFSFKDFKTRMEHENIFILREKIEKNLVEEDKRVVVFIDDLDRLDNEEIAQVLKLVKLIADFKFTTYILAFDEEVVSTAIADKYDQQSELGTSFLEKIIQVPINLPQPGYEDIRLVLLEGIEEILNNNKISLTHSETIRLKGNMDGSFGYFNFNLRTVKRYLNSISFAIPTIKGEINVVDLLCIEGVRIFFPQIHKFIFNHSKAFLNAGRSTFRKNTIHEEYKELLNELFSNYSDEEKKKIKAIIEDLFPRSKFLFTGNNKYGDDWEKKWFSEQRICSEDYFHKYFIYDVKHGVISDHEYHWLLEELQEKDTKKVCGAISNLVEKHGFSNLLKKLRYVDNELQSNSGEKLSLSLARLGEKVPEEPGVMQFFTSIAEAAKLICKLILLQSKDYRMCVTINIIKNSSSLKLSSEIFFRLVPNEEREQETLSEEEIEKVAQTLIPKIKDEMYKGNFFDEHPTSSSQLLLIWSKWGDESVFKVAIEKYFAQDRGIEEFLEAFSNRRVNLSTGAPSTKKFDDSSYADLRKIYPPEKIVNRLIGSYPTDLEKINETIVKKEFEENSVVESFLLFYLRDNE
SIO_010081: AAV35_RS14195
subclass of: SO_0000673
so part of: AAV35_RS14195
location: complement(22941..25490)
location: region:22941-25490:-1
so has part: feature:22941-25490:-1:exon

WP_008591582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22941-25490:-1:exon