Paraburkholderia phenoliruptrix BR3459a plasmid pSYMBR3459, complete sequence.
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia.
Complete genome sequence of Burkholderia phenoliruptrix BR3459a (CLA1), a heat-tolerant, nitrogen-fixing symbiont of Mimosa flocculosa
Submitted (24-SEP-2012) Labinfo, LNCC - Laboratorio Nacional de Computacao Cientifica, Rua Getulio Vargas 333, Petropolis, RJ 25651070, Brazil
REFSEQ INFORMATION: The reference sequence is identical to\nCP003865.1.\nBacteria is available from Embrapa Agrobiology Diazothrophic\nMicrobial Culture Collection (WDCM 364), Embrapa CNPAB, RJ, Brazil.\n(http://www.cnpab.embrapa.br/).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/23/2023 03:59:45\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,842\nCDSs (total) :: 6,758\nGenes (coding) :: 6,581\nCDSs (with protein) :: 6,581\nGenes (RNA) :: 84\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 62\nncRNAs :: 4\nPseudo Genes (total) :: 177\nCDSs (without protein) :: 177\nPseudo Genes (ambiguous residues) :: 0 of 177\nPseudo Genes (frameshifted) :: 94 of 177\nPseudo Genes (incomplete) :: 121 of 177\nPseudo Genes (internal stop) :: 22 of 177\nPseudo Genes (multiple problems) :: 48 of 177\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_007741253.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_018438157.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017423569.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018420346.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015672469.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013094582.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406404.1
hydrogenase expression/formation protein HypE
COORDINATES: similar to AA sequence:RefSeq:WP_012406405.1
GO:0016530 - metallochaperone activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406406.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_012406407.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004145.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: similar to AA sequence:RefSeq:WP_012406409.1
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: similar to AA sequence:RefSeq:WP_015004146.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406411.1
[NiFe]-hydrogenase assembly chaperone HybE
COORDINATES: similar to AA sequence:RefSeq:WP_012406412.1
hydrogenase expression/formation protein
COORDINATES: similar to AA sequence:RefSeq:WP_015004149.1
COORDINATES: protein motif:HMM:TIGR00074.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406415.1
HyaD/HybD family hydrogenase maturation endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_012406416.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO:0022904 - respiratory electron transport chain [Evidence IEA]
Ni/Fe-hydrogenase, b-type cytochrome subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015004151.1
nickel-dependent hydrogenase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012406418.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004153.1
GO:0045303 - diaminobutyrate-2-oxoglutarate transaminase activity [Evidence IEA]
diaminobutyrate--2-oxoglutarate transaminase
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_012406421.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406423.1
isochorismatase family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_012406424.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406425.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775217.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012218333.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050366.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020066285.1
COORDINATES: similar to AA sequence:RefSeq:WP_014971987.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018436526.1
GO:0047471 - maltose alpha-D-glucosyltransferase activity [Evidence IEA]
GO:0009269 - response to desiccation [Evidence IEA]; GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406533.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611899.1
COORDINATES: similar to AA sequence:RefSeq:WP_018435818.1
COORDINATES: similar to AA sequence:RefSeq:WP_006484960.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013690338.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004278.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004168.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420717.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406529.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013094581.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406426.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406427.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406428.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004174.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406430.1
type II toxin-antitoxin system CcdA family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_012365102.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406431.1
COORDINATES: similar to AA sequence:RefSeq:WP_018441831.1
COORDINATES: similar to AA sequence:RefSeq:WP_006754629.1
COORDINATES: similar to AA sequence:RefSeq:WP_006754630.1
COORDINATES: similar to AA sequence:RefSeq:WP_006754631.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345403.1
COORDINATES: similar to AA sequence:RefSeq:WP_012432130.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738380.1
COORDINATES: similar to AA sequence:RefSeq:WP_008918346.1
COORDINATES: similar to AA sequence:RefSeq:WP_019448387.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - monoatomic anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: similar to AA sequence:RefSeq:WP_018422222.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093264.1
YMGG-like glycine zipper-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020066891.1
COORDINATES: similar to AA sequence:RefSeq:WP_007731667.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_012402840.1
GO:0004133 - glycogen debranching enzyme activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007738374.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738373.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738372.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093229.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
TrkA C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007737721.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738187.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545056.1
COORDINATES: similar to AA sequence:RefSeq:WP_003247423.1
COORDINATES: similar to AA sequence:RefSeq:WP_007733228.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006046776.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011755290.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF019016.2
COORDINATES: similar to AA sequence:RefSeq:WP_004189750.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014899129.1
COORDINATES: similar to AA sequence:RefSeq:WP_011516366.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014973334.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051014.1
COORDINATES: similar to AA sequence:RefSeq:WP_013592182.1
COORDINATES: similar to AA sequence:RefSeq:WP_006767020.1
COORDINATES: similar to AA sequence:RefSeq:WP_017335413.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007992069.1
COORDINATES: similar to AA sequence:RefSeq:WP_007586582.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004218.1
COORDINATES: similar to AA sequence:RefSeq:WP_007742289.1
COORDINATES: similar to AA sequence:RefSeq:WP_011493842.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004222.1
COORDINATES: similar to AA sequence:RefSeq:WP_006759516.1
COORDINATES: protein motif:HMM:NF014567.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: similar to AA sequence:RefSeq:WP_011488065.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488032.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093384.1
COORDINATES: similar to AA sequence:RefSeq:WP_006751146.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093386.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432796.1
COORDINATES: similar to AA sequence:RefSeq:WP_011301815.1
COORDINATES: similar to AA sequence:RefSeq:WP_010092698.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010091558.1
COORDINATES: similar to AA sequence:RefSeq:WP_004628766.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014253154.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013093388.1
COORDINATES: protein motif:HMM:NF013867.2
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018422952.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422953.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_018422954.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422955.1
COORDINATES: similar to AA sequence:RefSeq:WP_018422956.1
putative DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010108885.1
COORDINATES: similar to AA sequence:RefSeq:WP_003089113.1
GDCCVxC domain-containing (seleno)protein
COORDINATES: similar to AA sequence:RefSeq:WP_014001292.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420614.1
COORDINATES: similar to AA sequence:RefSeq:WP_011000070.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018420696.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004259.1
COORDINATES: protein motif:HMM:TIGR01764.1
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF024861.2
COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093793.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420592.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051555.1
COORDINATES: similar to AA sequence:RefSeq:WP_018436546.1
COORDINATES: similar to AA sequence:RefSeq:WP_013959269.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013959268.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_013587271.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405602.1
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_011002204.1
COORDINATES: similar to AA sequence:RefSeq:WP_014833957.1
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007983232.1
His-Xaa-Ser system radical SAM maturase HxsC
COORDINATES: similar to AA sequence:RefSeq:WP_017849484.1
His-Xaa-Ser system radical SAM maturase HxsB
COORDINATES: protein motif:HMM:TIGR03976.1
COORDINATES: protein motif:HMM:NF038296.1
COORDINATES: similar to AA sequence:RefSeq:WP_007179178.1
COORDINATES: protein motif:HMM:NF039385.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004359.1
COORDINATES: protein motif:HMM:NF033546.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577963.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004286.1
COORDINATES: similar to AA sequence:RefSeq:WP_007586577.1
H-NS family nucleoid-associated regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_018424235.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347520.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492657.1
GO:0005515 - protein binding [Evidence IEA]
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006999856.1
COORDINATES: similar to AA sequence:RefSeq:WP_013091722.1
thiamine pyrophosphate-requiring protein
COORDINATES: similar to AA sequence:RefSeq:WP_006577377.1
GO:0018454 - acetoacetyl-CoA reductase activity [Evidence IEA]
GO:0042619 - poly-hydroxybutyrate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018313515.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350072.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: similar to AA sequence:RefSeq:WP_012428105.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428104.1
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: similar to AA sequence:RefSeq:WP_012428102.1
capsular polysaccharide biosynthesis protein
COORDINATES: protein motif:HMM:TIGR00696.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012428101.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428100.1
GO:0003824 - catalytic activity [Evidence IEA]
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018284581.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017777807.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017777808.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012313307.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_012428099.1
undecaprenyl-phosphate glucose phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_007974113.1
COORDINATES: protein motif:HMM:NF022552.2
COORDINATES: similar to AA sequence:RefSeq:WP_011401457.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428098.1
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012428097.1
low molecular weight protein-tyrosine-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_012428096.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: similar to AA sequence:RefSeq:WP_008246692.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008246693.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428093.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004522193.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF024242.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012432230.1
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004539515.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420212.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004330.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406522.1
COORDINATES: similar to AA sequence:RefSeq:WP_009769809.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193238.1
COORDINATES: similar to AA sequence:RefSeq:WP_012211009.1
COORDINATES: similar to AA sequence:RefSeq:WP_007178965.1
COORDINATES: protein motif:HMM:NF024940.2
COORDINATES: similar to AA sequence:RefSeq:WP_009489182.1
COORDINATES: similar to AA sequence:RefSeq:WP_007183038.1
COORDINATES: protein motif:HMM:NF025819.2
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017462923.1
COORDINATES: similar to AA sequence:RefSeq:WP_011871608.1
COORDINATES: similar to AA sequence:RefSeq:WP_003056222.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406715.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004463.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_012406576.1
COORDINATES: similar to AA sequence:RefSeq:WP_011000214.1
COORDINATES: similar to AA sequence:RefSeq:WP_015927533.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024589.2
COORDINATES: protein motif:HMM:NF024758.2
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018311809.1
COORDINATES: similar to AA sequence:RefSeq:WP_011881662.1
COORDINATES: similar to AA sequence:RefSeq:WP_011881661.1
COORDINATES: protein motif:HMM:NF015210.2
COORDINATES: similar to AA sequence:RefSeq:WP_012971494.1
COORDINATES: protein motif:HMM:NF025079.2
COORDINATES: similar to AA sequence:RefSeq:WP_015004358.1
COORDINATES: similar to AA sequence:RefSeq:WP_013436823.1
COORDINATES: similar to AA sequence:RefSeq:WP_003117278.1
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010108862.1
COORDINATES: protein motif:HMM:NF025725.2
COORDINATES: similar to AA sequence:RefSeq:WP_019937262.1
COORDINATES: similar to AA sequence:RefSeq:WP_019256235.1
COORDINATES: similar to AA sequence:RefSeq:WP_009756251.1
COORDINATES: similar to AA sequence:RefSeq:WP_014132920.1
COORDINATES: similar to AA sequence:RefSeq:WP_008229794.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014132925.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014193300.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006414355.1
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006478054.1
COORDINATES: similar to AA sequence:RefSeq:WP_008351156.1
COORDINATES: similar to AA sequence:RefSeq:WP_006478052.1
COORDINATES: similar to AA sequence:RefSeq:WP_011885761.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014193307.1
hydantoinase/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007581227.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015004382.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193310.1
COORDINATES: similar to AA sequence:RefSeq:WP_007743092.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004385.1
COORDINATES: similar to AA sequence:RefSeq:WP_007581238.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_007581240.1
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008919982.1
GO:0008838 - diaminopropionate ammonia-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013588697.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588698.1
COORDINATES: similar to AA sequence:RefSeq:WP_008919978.1
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008919977.1
COORDINATES: similar to AA sequence:RefSeq:WP_018240716.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011347524.1
COORDINATES: similar to AA sequence:RefSeq:WP_011876084.1
COORDINATES: similar to AA sequence:RefSeq:WP_012585346.1
COORDINATES: similar to AA sequence:RefSeq:WP_005997683.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_003264390.1
COORDINATES: similar to AA sequence:RefSeq:WP_018421937.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_011876080.1
COORDINATES: similar to AA sequence:RefSeq:WP_011876091.1
COORDINATES: similar to AA sequence:RefSeq:WP_018310413.1
COORDINATES: similar to AA sequence:RefSeq:WP_018436479.1
COORDINATES: similar to AA sequence:RefSeq:WP_014899894.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013588705.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588706.1
COORDINATES: similar to AA sequence:RefSeq:WP_017776514.1
COORDINATES: similar to AA sequence:RefSeq:WP_017776513.1
COORDINATES: similar to AA sequence:RefSeq:WP_020066697.1
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011356268.1
COORDINATES: similar to AA sequence:RefSeq:WP_018435938.1
COORDINATES: similar to AA sequence:RefSeq:WP_011876067.1
COORDINATES: similar to AA sequence:RefSeq:WP_011876065.1
COORDINATES: similar to AA sequence:RefSeq:WP_011876064.1
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017330572.1
COORDINATES: similar to AA sequence:RefSeq:WP_017776506.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008922260.1
COORDINATES: similar to AA sequence:RefSeq:WP_006759274.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015377876.1
COORDINATES: similar to AA sequence:RefSeq:WP_020230005.1
COORDINATES: similar to AA sequence:RefSeq:WP_020230006.1
COORDINATES: similar to AA sequence:RefSeq:WP_020227732.1
COORDINATES: similar to AA sequence:RefSeq:WP_018006545.1
COORDINATES: similar to AA sequence:RefSeq:WP_018006546.1
COORDINATES: similar to AA sequence:RefSeq:WP_020230008.1
COORDINATES: similar to AA sequence:RefSeq:WP_013958555.1
COORDINATES: similar to AA sequence:RefSeq:WP_018006534.1
COORDINATES: similar to AA sequence:RefSeq:WP_003274030.1
COORDINATES: similar to AA sequence:RefSeq:WP_018445091.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_015004289.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004287.1
COORDINATES: similar to AA sequence:RefSeq:WP_015934105.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009890275.1
GSU2403 family nucleotidyltransferase fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_009951418.1
peptidase S9, prolyl oligopeptidase active site region
COORDINATES: protein motif:HMM:NF013752.2
COORDINATES: similar to AA sequence:RefSeq:WP_014972972.1
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009770157.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094445.1
aromatic/alkene monooxygenase hydroxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012430595.1
COORDINATES: similar to AA sequence:RefSeq:WP_018989564.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018435811.1
toluene-4-monooxygenase system B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012430592.1
Toluene-4-monooxygenase system protein A
COORDINATES: similar to AA sequence:RefSeq:WP_011516397.1
COORDINATES: similar to AA sequence:RefSeq:WP_007583512.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049938.1
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014430.2
COORDINATES: similar to AA sequence:RefSeq:WP_007733337.1
COORDINATES: similar to AA sequence:RefSeq:WP_006398210.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012404236.1
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: protein motif:HMM:NF025468.2
COORDINATES: similar to AA sequence:RefSeq:WP_007748872.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020071393.1
PDDEXK nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012406466.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004473.1
COORDINATES: similar to AA sequence:RefSeq:WP_006049832.1
COORDINATES: similar to AA sequence:RefSeq:WP_007738055.1
COORDINATES: similar to AA sequence:RefSeq:WP_008952970.1
COORDINATES: protein motif:HMM:NF024740.2
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018240481.1
COORDINATES: similar to AA sequence:RefSeq:WP_018240480.1
COORDINATES: similar to AA sequence:RefSeq:WP_015328908.1
COORDINATES: similar to AA sequence:RefSeq:WP_018240477.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_004521458.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497706.1
COORDINATES: protein motif:HMM:NF009828.0
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: similar to AA sequence:RefSeq:WP_018390238.1
COORDINATES: similar to AA sequence:RefSeq:WP_014193346.1
COORDINATES: similar to AA sequence:RefSeq:WP_018438806.1
COORDINATES: protein motif:HMM:NF004783.0
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF012904.2
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009833272.1
COORDINATES: similar to AA sequence:RefSeq:WP_007924892.1
DNA-binding transcriptional regulator DsdC
COORDINATES: similar to AA sequence:RefSeq:WP_003438432.1
GO:0008721 - D-serine ammonia-lyase activity [Evidence IEA]
GO:0046416 - D-amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020566319.1
type IV toxin-antitoxin system AbiEi family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_018423050.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018423051.1
COORDINATES: similar to AA sequence:RefSeq:WP_018441818.1
COORDINATES: similar to AA sequence:RefSeq:WP_018441819.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588626.1
COORDINATES: similar to AA sequence:RefSeq:WP_018441824.1
COORDINATES: similar to AA sequence:RefSeq:WP_015002801.1
COORDINATES: similar to AA sequence:RefSeq:WP_018441826.1
COORDINATES: similar to AA sequence:RefSeq:WP_018441827.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004513.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423062.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423067.1
COORDINATES: similar to AA sequence:RefSeq:WP_015003297.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004528463.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691524.1
GO:0016901 - oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor [Evidence IEA]
GO:0006089 - lactate metabolic process [Evidence IEA]; GO:0019516 - lactate oxidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014191928.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007742101.1
COORDINATES: similar to AA sequence:RefSeq:WP_011544710.1
COORDINATES: similar to AA sequence:RefSeq:WP_011796998.1
COORDINATES: similar to AA sequence:RefSeq:WP_011487802.1
COORDINATES: similar to AA sequence:RefSeq:WP_011487803.1
COORDINATES: similar to AA sequence:RefSeq:WP_014753274.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007182343.1
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: similar to AA sequence:RefSeq:WP_007735573.1
COORDINATES: similar to AA sequence:RefSeq:WP_006964223.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490521.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423071.1
COORDINATES: similar to AA sequence:RefSeq:WP_007586026.1
COORDINATES: similar to AA sequence:RefSeq:WP_018441836.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004535.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588643.1
TIGR03761 family integrating conjugative element protein
COORDINATES: similar to AA sequence:RefSeq:WP_013588644.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588645.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588646.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588648.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588649.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004543.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004544.1
COORDINATES: protein motif:HMM:NF012699.2
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013588653.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588656.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498616.1
branched-chain alpha-keto acid dehydrogenase subunit E2
COORDINATES: similar to AA sequence:RefSeq:WP_015004566.1
COORDINATES: similar to AA sequence:RefSeq:WP_013580089.1
COORDINATES: protein motif:HMM:TIGR02995.1
GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0033286 - ATPase-coupled ectoine transmembrane transporter activity [Evidence IEA]; GO:0033288 - ATPase-coupled hydroxyectoine transmembrane transporter activity [Evidence IEA]; GO:0033294 - ectoine binding [Evidence IEA]; GO:0033295 - hydroxyectoine binding [Evidence IEA]
GO:0051470 - ectoine transport [Evidence IEA]; GO:0033308 - hydroxyectoine transport [Evidence IEA]
ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB
COORDINATES: protein motif:HMM:NF036686.2
COORDINATES: similar to AA sequence:RefSeq:WP_018436505.1
COORDINATES: similar to AA sequence:RefSeq:WP_013790176.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018436504.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015003048.1
COORDINATES: similar to AA sequence:RefSeq:WP_006384140.1
GO:0004121 - cystathionine beta-lyase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006484620.1
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF016817.2
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01725
SAM-I-IV-variant riboswitch; SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_018099254.1
COORDINATES: similar to AA sequence:RefSeq:WP_008919056.1
COORDINATES: similar to AA sequence:RefSeq:WP_014251558.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018438411.1
GO:0008743 - L-threonine 3-dehydrogenase activity [Evidence IEA]
GO:0006567 - threonine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017878477.1
COORDINATES: similar to AA sequence:RefSeq:WP_006051457.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439698.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004571.1
COORDINATES: similar to AA sequence:RefSeq:WP_020566081.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439701.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439702.1
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF024799.2
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020566082.1
COORDINATES: similar to AA sequence:RefSeq:WP_017775146.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439706.1
acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018310279.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018439708.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018439709.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007734304.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194523.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_018439715.1
GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
acetaldehyde dehydrogenase (acetylating)
COORDINATES: similar to AA sequence:RefSeq:WP_020706632.1
GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018439713.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439712.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439711.1
COORDINATES: similar to AA sequence:RefSeq:WP_013587688.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007731341.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771287.1
plasmid mobilization relaxosome protein MobC
COORDINATES: similar to AA sequence:RefSeq:WP_007738715.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004596.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406644.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406643.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004597.1
COORDINATES: protein motif:HMM:NF023926.2
COORDINATES: similar to AA sequence:RefSeq:WP_012406640.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406637.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406636.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004605.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_015004607.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004608.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660960.1
type II toxin-antitoxin system ParD family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_015004613.1
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: similar to AA sequence:RefSeq:WP_012406625.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012406624.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406623.1
VirB3 family type IV secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_012406622.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406621.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406620.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406619.1
COORDINATES: similar to AA sequence:RefSeq:WP_016786534.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004620.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004621.1
TrbG/VirB9 family P-type conjugative transfer protein
COORDINATES: similar to AA sequence:RefSeq:WP_015004622.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004624.1
GO:0043684 - type IV secretion system complex [Evidence IEA]
GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406613.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004626.1
COORDINATES: similar to AA sequence:RefSeq:WP_007731440.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771258.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406610.1
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012406609.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406608.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004631.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406606.1
TrbM/KikA/MpfK family conjugal transfer protein
COORDINATES: similar to AA sequence:RefSeq:WP_012406605.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004634.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406603.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094739.1
COORDINATES: similar to AA sequence:RefSeq:WP_014631369.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004639.1
COORDINATES: similar to AA sequence:RefSeq:WP_018418882.1
COORDINATES: protein motif:HMM:NF018952.2
COORDINATES: protein motif:HMM:NF037872.2
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: similar to AA sequence:RefSeq:WP_017490346.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011494272.1
COORDINATES: similar to AA sequence:RefSeq:WP_003992896.1
COORDINATES: similar to AA sequence:RefSeq:WP_013201746.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439694.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012365378.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004654.1
COORDINATES: similar to AA sequence:RefSeq:WP_013209493.1
COORDINATES: similar to AA sequence:RefSeq:WP_007587832.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588690.1
COORDINATES: similar to AA sequence:RefSeq:WP_003182585.1
COORDINATES: similar to AA sequence:RefSeq:WP_009449978.1
COORDINATES: similar to AA sequence:RefSeq:WP_017339928.1
COORDINATES: similar to AA sequence:RefSeq:WP_013958627.1
COORDINATES: similar to AA sequence:RefSeq:WP_013958628.1
COORDINATES: similar to AA sequence:RefSeq:WP_013393727.1
COORDINATES: similar to AA sequence:RefSeq:WP_018427547.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: similar to AA sequence:RefSeq:WP_007775823.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015276 - ligand-gated monoatomic ion channel activity [Evidence IEA]
lysine/arginine/ornithine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006468223.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010660302.1
COORDINATES: similar to AA sequence:RefSeq:WP_009763680.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406598.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_015004418.1
COORDINATES: similar to AA sequence:RefSeq:WP_017455426.1
COORDINATES: similar to AA sequence:RefSeq:WP_015602828.1
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF019998.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018322824.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_004272067.1
gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
COORDINATES: protein motif:HMM:NF013353.2
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013205465.1
COORDINATES: similar to AA sequence:RefSeq:WP_013343324.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439692.1
COORDINATES: similar to AA sequence:RefSeq:WP_007181206.1
COORDINATES: protein motif:HMM:NF014585.2
COORDINATES: similar to AA sequence:RefSeq:WP_020566080.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439688.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439687.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439686.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015600548.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012401203.1
COORDINATES: similar to AA sequence:RefSeq:WP_007746993.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018439683.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439682.1
GO:0050129 - N-formylglutamate deformylase activity [Evidence IEA]
GO:0019557 - histidine catabolic process to glutamate and formate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019936812.1
COORDINATES: protein motif:HMM:NF012382.2
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: similar to AA sequence:RefSeq:WP_020566077.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004697.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004698.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004699.1
COORDINATES: protein motif:HMM:NF015905.2
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF026057.2
transposase DNA-binding-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612149.1
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013699837.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012536794.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012354629.1
COORDINATES: similar to AA sequence:RefSeq:WP_003271244.1
COORDINATES: similar to AA sequence:RefSeq:WP_011238416.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008593995.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018423141.1
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_007181761.1
COORDINATES: similar to AA sequence:RefSeq:WP_011353237.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011483128.1
COORDINATES: similar to AA sequence:RefSeq:WP_004265662.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050642.1
COORDINATES: similar to AA sequence:RefSeq:WP_018442177.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406727.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406728.1
cytolethal distending toxin subunit B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014725847.1
GO:0009399 - nitrogen fixation [Evidence IEA]
nitrogenase-stabilizing/protective protein NifW
COORDINATES: similar to AA sequence:RefSeq:WP_007583220.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406730.1
COORDINATES: similar to AA sequence:RefSeq:WP_007745481.1
COORDINATES: protein motif:HMM:NF028458.2
COORDINATES: similar to AA sequence:RefSeq:WP_018435038.1
COORDINATES: similar to AA sequence:RefSeq:WP_018435039.1
COORDINATES: similar to AA sequence:RefSeq:WP_007589644.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406532.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_011000796.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094620.1
COORDINATES: similar to AA sequence:RefSeq:WP_008353950.1
COORDINATES: similar to AA sequence:RefSeq:WP_007737701.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008353952.1
COORDINATES: similar to AA sequence:RefSeq:WP_014251827.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004734.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406734.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: similar to AA sequence:RefSeq:WP_012406737.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406739.1
COORDINATES: similar to AA sequence:RefSeq:WP_007734766.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012406741.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015004742.1
GO:0004020 - adenylylsulfate kinase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004743.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406744.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0009877 - nodulation [Evidence IEA]; GO:0009312 - oligosaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003551805.1
COORDINATES: similar to AA sequence:RefSeq:WP_015930563.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406747.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004748.1
nodulation factor ABC transporter ATP-binding protein NodI
COORDINATES: similar to AA sequence:RefSeq:WP_012406749.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406750.1
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004751.1
COORDINATES: protein motif:HMM:NF014686.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004752.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406754.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004754.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004755.1
GO:0009399 - nitrogen fixation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
nif-specific transcriptional activator NifA
COORDINATES: similar to AA sequence:RefSeq:WP_012406757.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
COORDINATES: similar to AA sequence:RefSeq:WP_015004756.1
nitrogenase iron-molybdenum cofactor biosynthesis protein NifN
COORDINATES: similar to AA sequence:RefSeq:WP_012406759.1
GO:0051540 - metal cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017773477.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406761.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094483.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423241.1
COORDINATES: similar to AA sequence:RefSeq:WP_018423212.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880113.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406766.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177260.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004760.1
nitrogenase stabilizing/protective protein NifW
COORDINATES: similar to AA sequence:RefSeq:WP_015004761.1
GO:0004410 - homocitrate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406770.1
nitrogenase cofactor biosynthesis protein NifB
COORDINATES: similar to AA sequence:RefSeq:WP_020202109.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406772.1
iron-sulfur cluster assembly accessory protein
COORDINATES: similar to AA sequence:RefSeq:WP_020202106.1
COORDINATES: protein motif:HMM:NF016226.2
COORDINATES: similar to AA sequence:RefSeq:WP_012406775.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406776.1
COORDINATES: protein motif:HMM:NF024954.2
COORDINATES: similar to AA sequence:RefSeq:WP_015004769.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406779.1
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014725866.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094509.1
GO:0016611 - iron-iron nitrogenase complex [Evidence IEA]; GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]; GO:0016613 - vanadium-iron nitrogenase complex [Evidence IEA]
GO:0016163 - nitrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011801729.1
GO:0016612 - molybdenum-iron nitrogenase complex [Evidence IEA]
nitrogenase molybdenum-iron protein alpha chain
COORDINATES: similar to AA sequence:RefSeq:WP_017773471.1
nitrogenase molybdenum-iron protein subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012406784.1
COORDINATES: similar to AA sequence:RefSeq:WP_004523392.1
COORDINATES: similar to AA sequence:RefSeq:WP_007744354.1
GO:0009267 - cellular response to starvation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007576983.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406788.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004722.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406792.1
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406793.1
carboxyl transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015004780.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406795.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004782.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406798.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094499.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406800.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004787.1
GO:0047304 - 2-aminoethylphosphonate-pyruvate transaminase activity [Evidence IEA]
GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
2-aminoethylphosphonate--pyruvate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_015004788.1
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004789.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406804.1
Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002556121.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004791.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004792.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420487.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577647.1
COORDINATES: protein motif:HMM:NF024980.2
COORDINATES: similar to AA sequence:RefSeq:WP_018420903.1
COORDINATES: similar to AA sequence:RefSeq:WP_006755779.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406810.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004796.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004797.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004798.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406814.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004800.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406816.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406817.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406818.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004802.1
COORDINATES: similar to AA sequence:RefSeq:WP_006225134.1
COORDINATES: similar to AA sequence:RefSeq:WP_003819290.1
COORDINATES: protein motif:HMM:NF017747.2
COORDINATES: similar to AA sequence:RefSeq:WP_006406810.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406825.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406826.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094578.1
GO:0046417 - chorismate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406829.1
COORDINATES: similar to AA sequence:RefSeq:WP_007740894.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004812.1
COORDINATES: similar to AA sequence:RefSeq:WP_010099870.1
GO:0008660 - 1-aminocyclopropane-1-carboxylate deaminase activity [Evidence IEA]
GO:0042217 - 1-aminocyclopropane-1-carboxylate catabolic process [Evidence IEA]
1-aminocyclopropane-1-carboxylate deaminase