Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence.
type: Entry
definition: Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence.
sequence version: NZ_CP007792.1
sequence date: 2023-04-27
sequence: sequence
division: CON
label: NZ_CP007792.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02800399
keyword: RefSeq
source: Corynebacterium marinum DSM 44953
organism: Corynebacterium marinum DSM 44953
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Corynebacteriaceae; Corynebacterium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP007792.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Newbler v. 2.8\nAssembly Name :: C.marinum_v12\nGenome Coverage :: 243.8x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/27/2023 02:06:37\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,623\nCDSs (total) :: 2,555\nGenes (coding) :: 2,514\nCDSs (with protein) :: 2,514\nGenes (RNA) :: 68\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 3\nPseudo Genes (total) :: 41\nCDSs (without protein) :: 41\nPseudo Genes (ambiguous residues) :: 0 of 41\nPseudo Genes (frameshifted) :: 12 of 41\nPseudo Genes (incomplete) :: 29 of 41\nPseudo Genes (internal stop) :: 6 of 41\nPseudo Genes (multiple problems) :: 6 of 41\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 96094
topology: circular
so has quality: SO_0000988
location: 1..96094
location: region:1-96094:1
RO_0002162: 1224162

NZ_CP007792
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02800399
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Corynebacterium marinum DSM 44953
author: Schaffert, L.
author: Albersmeier, A.
author: Kalinowski, J.
author: Ruckert, C.
journal: Unpublished

2
title: Direct Submission
author: Schaffert, L.
author: Albersmeier, A.
author: Kalinowski, J.
author: Ruckert, C.
journal: Submitted (22-MAY-2014) CeBiTec, Bielefeld University, Universitaetsstr. 27, Bielefeld, NRW 33615, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96094:1
position: 96094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-96094:1:source
so part of: sequence
organism: Corynebacterium marinum DSM 44953
mol type: genomic DNA
strain: DSM 44953
isolation source: coastal sediment
culture collection: DSM:44953
type material: type strain of Corynebacterium marinum
plasmid: pCmarinum1
country: China: coastal sediment close to a coal-fired power station, Qingdao
collection date: 2002

1224162
type: Taxonomy
SIO_000068: taxonomy

B840_RS12355
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12355
old locus tag: B840_12655
so part of: sequence
location: 114..551
location: region:114-551:1
so has part: feature:114-551:1:exon
subclass of: SO_0000010

position:114:1
position: 114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551:1
position: 551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114-551:1:exon

B840_RS12355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12355
old locus tag: B840_12655
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANQRIHATTRQVPAKVWTADKAKMTTLPPYPPQVGVMRQVRLPRNYYVAVDANRYSVDPRMINRIVTVHADLEQVIVRAPDGVIVAHHVRVWGEHQTLTDPTHAATAKQMRHQLAVTRIHPQAVEVEQADLNVYDRLAGLEVGA
SIO_010081: B840_RS12355
subclass of: SO_0000673
so part of: B840_RS12355
location: 114..551
location: region:114-551:1
so has part: feature:114-551:1:exon

WP_211255115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114-551:1:exon

B840_RS12360
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
gene: istB
locus tag: B840_RS12360
old locus tag: B840_12660
so part of: sequence
location: 548..1339
location: region:548-1339:1
so has part: feature:548-1339:1:exon
subclass of: SO_0000010

position:548:1
position: 548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339:1
position: 1339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548-1339:1:exon

B840_RS12360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
gene: istB
locus tag: B840_RS12360
old locus tag: B840_12660
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006841214.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MTRAHHTATESEVAYLARALKAPRIGSDYAAIAAQARDGSWTYEEYLAAVLSVEASARAESGARGRIRRAGFPQIKTIDEFDFSTQPTIDRGRIARLETGGWITEAGNVIFLGPPGTGKTHLATGLGVIAARQGYRVAFDTAAGWITRLTQAHSRGELDGLLTKLNRYQLLIVDEVGYVPIEADAANLFFQLVSGRYERGSLIMTSNLPFSRWGECFGDITVAAAMVDRIVHHAEIFTHKGTSYRIAGREGVLPSVVAERQAH
SIO_010081: B840_RS12360
subclass of: SO_0000673
so part of: B840_RS12360
location: 548..1339
location: region:548-1339:1
so has part: feature:548-1339:1:exon

WP_042622787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548-1339:1:exon

B840_RS12365
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12365
old locus tag: B840_12665
so part of: sequence
location: complement(1451..1747)
location: region:1451-1747:-1
so has part: feature:1451-1747:-1:exon
subclass of: SO_0000010

position:1451:-1
position: 1451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747:-1
position: 1747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1451-1747:-1:exon

B840_RS12365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12365
old locus tag: B840_12665
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003859509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MESAGRPRVTPLEEGALFETKRMEAASGISWPRHRASTESVLVVTEGQCIVQFSAEDRGVSAGDSLVIPADIWHEIVADPEFKAVHIMPKEIRFTFST
SIO_010081: B840_RS12365
subclass of: SO_0000673
so part of: B840_RS12365
location: complement(1451..1747)
location: region:1451-1747:-1
so has part: feature:1451-1747:-1:exon

WP_042622788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1451-1747:-1:exon

B840_RS13915
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13915
so part of: sequence
location: complement(1845..2018)
location: region:1845-2018:-1
so has part: feature:1845-2018:-1:exon
subclass of: SO_0000010

position:1845:-1
position: 1845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2018:-1
position: 2018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845-2018:-1:exon

B840_RS13915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13915
inference: COORDINATES: protein motif:HMM:NF016133.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MAKKAGKYKGRKRALTPDDVEKARKRVEAGESKVSIAQDLRIGRVTLYRALSNNDKD
SIO_010081: B840_RS13915
subclass of: SO_0000673
so part of: B840_RS13915
location: complement(1845..2018)
location: region:1845-2018:-1
so has part: feature:1845-2018:-1:exon

WP_229676672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1845-2018:-1:exon

B840_RS13920
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13920
so part of: sequence
location: complement(1937..2155)
location: region:1937-2155:-1
so has part: feature:1937-2155:-1:exon
subclass of: SO_0000010

position:1937:-1
position: 1937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2155:-1
position: 2155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1937-2155:-1:exon

B840_RS13920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011015523.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MHFIKENLIFSAESNASRAQLMLSILGSFAEFERSIIRERQAEGIAWRKRPASTRAANAPSPRTTSRKPGNG
SIO_010081: B840_RS13920
subclass of: SO_0000673
so part of: B840_RS13920
location: complement(1937..2155)
location: region:1937-2155:-1
so has part: feature:1937-2155:-1:exon

WP_229676664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1937-2155:-1:exon

B840_RS12375
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12375
old locus tag: B840_12675
so part of: sequence
location: complement(2301..2624)
location: region:2301-2624:-1
so has part: feature:2301-2624:-1:exon
subclass of: SO_0000010

position:2301:-1
position: 2301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624:-1
position: 2624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2301-2624:-1:exon

B840_RS12375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12375
old locus tag: B840_12675
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005531876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin family protein
translation: MTYTIAQPCVDVLDRACVEECPVDCIYEGKRMLYIHPDECVDCGACEPVCPVEAIFYEDDVPNEWVDYTGANAAFFDDLGSPGGAASLGPQDFDVQLVAALPPQNQD
SIO_010081: B840_RS12375
subclass of: SO_0000673
so part of: B840_RS12375
location: complement(2301..2624)
location: region:2301-2624:-1
so has part: feature:2301-2624:-1:exon

WP_042622790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2301-2624:-1:exon

B840_RS12380
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12380
old locus tag: B840_12680
so part of: sequence
location: complement(2889..3224)
location: region:2889-3224:-1
so has part: feature:2889-3224:-1:exon
subclass of: SO_0000010

position:2889:-1
position: 2889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3224:-1
position: 3224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2889-3224:-1:exon

B840_RS12380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12380
old locus tag: B840_12680
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003859505.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MQKISIEAIARQQLKMADTAPSARAADTVFGGHEKILRQTVIGIRQGAELGERDNHDESTIYVLQGRVQLRTGDETWIGRSGDLLIVPRSRHSLEAIEDSAVLITIAKLTQ
SIO_010081: B840_RS12380
subclass of: SO_0000673
so part of: B840_RS12380
location: complement(2889..3224)
location: region:2889-3224:-1
so has part: feature:2889-3224:-1:exon

WP_042622791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2889-3224:-1:exon

B840_RS12385
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12385
old locus tag: B840_12685
so part of: sequence
location: complement(3582..3812)
location: region:3582-3812:-1
so has part: feature:3582-3812:-1:exon
subclass of: SO_0000010

position:3582:-1
position: 3582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3812:-1
position: 3812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3582-3812:-1:exon

B840_RS12385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12385
old locus tag: B840_12685
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012226214.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hexameric tyrosine-coordinated heme protein
translation: MALVPDNTLITQTPEQGRELAIMLARKTIGAIQPDAEVRETLRPGYATNADSLTMAGHVVAIEFATIAAANNYWRA
SIO_010081: B840_RS12385
subclass of: SO_0000673
so part of: B840_RS12385
location: complement(3582..3812)
location: region:3582-3812:-1
so has part: feature:3582-3812:-1:exon

WP_042622792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3582-3812:-1:exon

B840_RS12390
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12390
old locus tag: B840_12690
pseudo: true
so part of: sequence
location: complement(<4088..4693)
location: region:4088-4693:-1
so has part: feature:4088-4693:-1:exon
subclass of: SO_0000010

position:4088:-1
position: 4088
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:4693:-1
position: 4693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4088-4693:-1:exon

B840_RS12390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12390
old locus tag: B840_12690
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: B840_RS12390
subclass of: SO_0000673
so part of: B840_RS12390
location: complement(<4088..4693)
location: region:4088-4693:-1
so has part: feature:4088-4693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4088-4693:-1:exon

B840_RS13340
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13340
so part of: sequence
location: 4735..5019
location: region:4735-5019:1
so has part: feature:4735-5019:1:exon
subclass of: SO_0000010

position:4735:1
position: 4735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5019:1
position: 5019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4735-5019:1:exon

B840_RS13340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13340
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQQHLSDPNSSEESRRDAFDRLERLDDKLMEHDVNNKRFNLQSLQINKEAFIIGSVLVASAVVATINPEAKNFLAQNAPKVLSSTAKMLLPGKK
SIO_010081: B840_RS13340
subclass of: SO_0000673
so part of: B840_RS13340
location: 4735..5019
location: region:4735-5019:1
so has part: feature:4735-5019:1:exon

WP_229676666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4735-5019:1:exon

B840_RS12395
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12395
old locus tag: B840_12700
so part of: sequence
location: complement(5124..5513)
location: region:5124-5513:-1
so has part: feature:5124-5513:-1:exon
subclass of: SO_0000010

position:5124:-1
position: 5124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5513:-1
position: 5513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5124-5513:-1:exon

B840_RS12395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12395
old locus tag: B840_12700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019175580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal-responsive transcriptional regulator
translation: MRIGELAERAGTTAKTLRFYEEQGLLPPTERTPSGYRDYAPETVARIDFVHRGQAAGLTLAQIRQILDIRDGGHAPCEHVRDLLDVRLAEIEQQIAQLSVLRDTIADLRQDAAHPDPETCSTDQVCRYL
SIO_010081: B840_RS12395
subclass of: SO_0000673
so part of: B840_RS12395
location: complement(5124..5513)
location: region:5124-5513:-1
so has part: feature:5124-5513:-1:exon

WP_003859021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5124-5513:-1:exon

B840_RS12400
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
gene: merA
locus tag: B840_RS12400
old locus tag: B840_12705
so part of: sequence
location: 5612..7033
location: region:5612-7033:1
so has part: feature:5612-7033:1:exon
subclass of: SO_0000010

position:5612:1
position: 5612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7033:1
position: 7033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5612-7033:1:exon

B840_RS12400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
gene: merA
locus tag: B840_RS12400
old locus tag: B840_12705
EC number: 1.16.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012359884.1
GO function: GO:0016152 - mercury (II) reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mercury(II) reductase
translation: MPTKYDLAIIGSGGGAFAAAIRASTLGKSVVMIERGTLGGTCVNTGCVPSKALIAAAGARHVAVDAATRFPGIATTADPVDMPALIAGKQALVESLRGEKYADVADSYGWQVLRGDASFVGTPDAPVLDVAGADRSVETIEAHHYLVATGSRPWAPPIDGLEETGYLTSTTAMELTEVPESLLVLGGGYVALEQAQLFARLGSQVTLLVRSRLASKEEPEVSKALQEVFADEGIRVVSRAVPTRVSRGTGGEAVVTAAVSGGSQEFRADQVLVALGRRPVTDGLNLDAVGVKTGDSGEVVVSDRLQSSNPRIWAAGDVTGHPEFVYVAAHHGTLVAENAFADADRSVDYARLPRVTFTGPAIGAVGMTEKDVLAAGIRCDCRVLPLHHVPRALVNRDTRGFIKIVVNAETNEILGLTAVAKDAGELAAAGVHVLGRTVAEVADAWAPYLTMAEGIRIAAKAFTTDPSLLSCCA
SIO_010081: B840_RS12400
subclass of: SO_0000673
so part of: B840_RS12400
location: 5612..7033
location: region:5612-7033:1
so has part: feature:5612-7033:1:exon

WP_003859023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5612-7033:1:exon

B840_RS12405
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12405
old locus tag: B840_12710
so part of: sequence
location: 7262..8377
location: region:7262-8377:1
so has part: feature:7262-8377:1:exon
subclass of: SO_0000010

position:7262:1
position: 7262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8377:1
position: 8377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7262-8377:1:exon

B840_RS12405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12405
old locus tag: B840_12710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770493.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MARVGTLLDDYGRPADRVQIIRRGKNNTRIKRSTNYGRSWAVEDELVPTGLILDDGGLRFEQHSNNPTHATYRANGIPKARLRVQRVYSTITKAQVYLGDTTWSEVEDFSTKDIVFDGGAGHGWNIPTWHEPIDTDTSLAVGELPREQGREVGERRQESTPVPVPATQVAVAPPAPAALILEASKVQRFSYLRVSSADQNLARQRAMIGDVNKEFIDEVSARSRADRPGLERCIDYLRDHDELHVASIDRLARSLVDLRFIIDAITAKGASVHFIKENLTFSEDSTDPRATLMLGILGSFAEFERTIIRERQAEGIALAKKAGKYKGRKRALSPKKVQEARRRAVAGESKVVIAKDLNVSRATLYRALKSD
SIO_010081: B840_RS12405
subclass of: SO_0000673
so part of: B840_RS12405
location: 7262..8377
location: region:7262-8377:1
so has part: feature:7262-8377:1:exon

WP_042622793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7262-8377:1:exon

B840_RS13615
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13615
so part of: sequence
location: complement(8466..8813)
location: region:8466-8813:-1
so has part: feature:8466-8813:-1:exon
subclass of: SO_0000010

position:8466:-1
position: 8466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8813:-1
position: 8813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8466-8813:-1:exon

B840_RS13615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13615
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTPSPEPHEIVEHFHDFIENSRPGNQIVRAARDIEYHDRTVTITYSPAHVGATDEALLSVIPNRLAVILGTPIAFNDQKGTYIRSAVDLLTVLSEQGEVLDEISTEELHARAVS
SIO_010081: B840_RS13615
subclass of: SO_0000673
so part of: B840_RS13615
location: complement(8466..8813)
location: region:8466-8813:-1
so has part: feature:8466-8813:-1:exon

WP_156971984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8466-8813:-1:exon

B840_RS12410
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12410
old locus tag: B840_12715
so part of: sequence
location: 9045..9812
location: region:9045-9812:1
so has part: feature:9045-9812:1:exon
subclass of: SO_0000010

position:9045:1
position: 9045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9812:1
position: 9812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9045-9812:1:exon

B840_RS12410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12410
old locus tag: B840_12715
inference: COORDINATES: protein motif:HMM:NF019886.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma-70 family RNA polymerase sigma factor
translation: MEDADELFEPGLRRRRNAVQRWVTSQTVDEVSRRDGDRELYQILADQGFRGADYADFERELVDYGFMVIRSWLRKGKLLEKCGSLKVKGISTGIDLDPSSLREHEIEDLTEDIVADGIYRFREQSLFGGRWRPNGPASMRTFFINRCLFSSADPLTAFHRQRKREQEMIYLDGFSDRGSFVDPENTAEAVTQDIDLMRLVGMLGPQDREILTLHLEGLKHREIGQKMGTTPKGIERRLARIHARLRDDATKEETA
SIO_010081: B840_RS12410
subclass of: SO_0000673
so part of: B840_RS12410
location: 9045..9812
location: region:9045-9812:1
so has part: feature:9045-9812:1:exon

WP_042622794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9045-9812:1:exon

B840_RS13620
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13620
old locus tag: B840_12720
so part of: sequence
location: 9809..9973
location: region:9809-9973:1
so has part: feature:9809-9973:1:exon
subclass of: SO_0000010

position:9809:1
position: 9809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9973:1
position: 9973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9809-9973:1:exon

B840_RS13620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13620
old locus tag: B840_12720
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDSYRKAFERSSFGTPEVAQARKVITASQRESVLKKIEDKRRSTSKKGDIGRK
SIO_010081: B840_RS13620
subclass of: SO_0000673
so part of: B840_RS13620
location: 9809..9973
location: region:9809-9973:1
so has part: feature:9809-9973:1:exon

WP_156971985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9809-9973:1:exon

B840_RS13625
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13625
old locus tag: B840_12730
so part of: sequence
location: 10521..11477
location: region:10521-11477:1
so has part: feature:10521-11477:1:exon
subclass of: SO_0000010

position:10521:1
position: 10521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11477:1
position: 11477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10521-11477:1:exon

B840_RS13625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13625
old locus tag: B840_12730
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNVTDFQWWTAERVAAAANAGIFVLAVITAVAALVAVYQTKRIIKQNEIARTDHSEAALASQKQQEEYNRLATDSADHQAKSVELQRESVERTNRPMMTVRYLPPKSTMDVLDLEISNVGKSVAYQVHAEFDPPLPEPDLDALNKNSDPGQTFHHPNAEIPRTVFAGRTFRTWVPGQKVTAPFWVSHKDYEVGDRDALSAEGIPAQQLVHIHYRDEKNERYADTFELDPGIWAGTMFQETDEQKQRKALEKLSKSVEGYGKTFTYQVQTLLNRATSPTQEEIEQKKEREEKIARIRAREHQRKTRQHEVEARQDKKQN
SIO_010081: B840_RS13625
subclass of: SO_0000673
so part of: B840_RS13625
location: 10521..11477
location: region:10521-11477:1
so has part: feature:10521-11477:1:exon

WP_156971986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10521-11477:1:exon

B840_RS12415
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12415
old locus tag: B840_12735
so part of: sequence
location: 11793..12137
location: region:11793-12137:1
so has part: feature:11793-12137:1:exon
subclass of: SO_0000010

position:11793:1
position: 11793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12137:1
position: 12137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11793-12137:1:exon

B840_RS12415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12415
old locus tag: B840_12735
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402078.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Lsr2 family protein
translation: MARREITQYFDDIDGTPLTDDQVTTLRFGVEGSEYVIDLSEDNATRFLDLLAPYVEAAQPAPVARNSRTRAAGGAKRLHSRRIRQWAQEQNLQVSDRGSIPKHIVEAYNQAHPS
SIO_010081: B840_RS12415
subclass of: SO_0000673
so part of: B840_RS12415
location: 11793..12137
location: region:11793-12137:1
so has part: feature:11793-12137:1:exon

WP_042622795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11793-12137:1:exon

B840_RS12420
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12420
old locus tag: B840_12740
so part of: sequence
location: complement(12276..13163)
location: region:12276-13163:-1
so has part: feature:12276-13163:-1:exon
subclass of: SO_0000010

position:12276:-1
position: 12276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13163:-1
position: 13163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12276-13163:-1:exon

B840_RS12420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12420
old locus tag: B840_12740
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018296659.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MPTLPPSARHDLTDAEWHLLAPLLPAPSRRGRPRTWDLRSLVNGIFFRIRTGCPWRDVHERYGPWWRVHDLFARLRADGVWEDVHTRLLTHAQEKGKLSWEVSVDSTTARGHVHAAGARKDSPLRHPGEPDHHGFGRSRGGWSTKIHVGIDAGCGVMSLVITPGQAGDGPQMVPVLDKIRVPSTGRGRPRRRPKRVLADKAYSSRANRKYLRSRGIKATISQPKDQVAHRRRRGSAGGRPPAFDTSVYRRRNVVERGINRIKQHRGCATRFDKLVVHFEATVQLAVIRYWLKRLS
SIO_010081: B840_RS12420
subclass of: SO_0000673
so part of: B840_RS12420
location: complement(12276..13163)
location: region:12276-13163:-1
so has part: feature:12276-13163:-1:exon

WP_042622796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12276-13163:-1:exon

B840_RS12425
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12425
old locus tag: B840_12745
so part of: sequence
location: complement(13275..13478)
location: region:13275-13478:-1
so has part: feature:13275-13478:-1:exon
subclass of: SO_0000010

position:13275:-1
position: 13275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13478:-1
position: 13478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13275-13478:-1:exon

B840_RS12425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12425
old locus tag: B840_12745
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013241084.1
GO component: GO:0005829 - cytosol [Evidence IEA]
GO function: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MAQGTVKWFNSEKGFGFIAPNDGSADLFVHYSEIQGGGFRNLEENQPVEFEVGEGAKGPQAQQVRPL
SIO_010081: B840_RS12425
subclass of: SO_0000673
so part of: B840_RS12425
location: complement(13275..13478)
location: region:13275-13478:-1
so has part: feature:13275-13478:-1:exon

WP_042622797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13275-13478:-1:exon

B840_RS12430
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12430
old locus tag: B840_12750
so part of: sequence
location: 13937..14554
location: region:13937-14554:1
so has part: feature:13937-14554:1:exon
subclass of: SO_0000010

position:13937:1
position: 13937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14554:1
position: 14554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13937-14554:1:exon

B840_RS12430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12430
old locus tag: B840_12750
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896448.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MALIGYMRVSKSDGSQTTDLQRDALLAAGVDPGHLYEDMASGKQEDRPHLEACLKALRSGDTLLVWKLDRLGRNLRHLVNIVHDLTARGVGLKVLTGQGAAIDTTSAQGKLVFGIFAALAEFERELISERTKAGLESARARGRKGGRPFKMTPAKVRLAMASMGQPETNVAALCQELGITRQTLYRHVSPTGELREDGQKLLSGS
SIO_010081: B840_RS12430
subclass of: SO_0000673
so part of: B840_RS12430
location: 13937..14554
location: region:13937-14554:1
so has part: feature:13937-14554:1:exon

WP_042622798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13937-14554:1:exon

B840_RS12435
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12435
old locus tag: B840_12755
so part of: sequence
location: 14905..16137
location: region:14905-16137:1
so has part: feature:14905-16137:1:exon
subclass of: SO_0000010

position:14905:1
position: 14905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16137:1
position: 16137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14905-16137:1:exon

B840_RS12435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12435
old locus tag: B840_12755
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002857208.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Nramp family divalent metal transporter
translation: MLSRRRVGRQPLAWLLGPAFVAAVAYVDPGNVAANITAGAQYGYLLVWVLVVANVMAMLVQYLSAKLGLVTGYSLPELLGQRLPRGRRLTFWAQAETVAAATDLAEVIGGAIALHILFGLPLLMGGLLIGLVSMLLLAIQSRHGQRPFEFVIVGLLVIITAGFLTGMFIGTVSWGEALAGIIPRFEGTPTVVLAASMLGATVMPHAIYAHSSLARDRHGDTIPPEALPRLLRVTRWDVLLSLLVAGSVNIAMLLLAAGNLNGIPGTDSIEGAHAVITDTLGPVVGVAFGVGLLASGLASTSVGCYAGSTIMGGLLHRQIPQVVRRAVTLLPALIVIAAGVEPTWALVLSQVVLSLGIPFALIPLVVLSSDQTLMGGFAIRVPLQVASWVVVALIVSLNLALIGLLVTGRG
SIO_010081: B840_RS12435
subclass of: SO_0000673
so part of: B840_RS12435
location: 14905..16137
location: region:14905-16137:1
so has part: feature:14905-16137:1:exon

WP_042622847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14905-16137:1:exon

B840_RS12440
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12440
old locus tag: B840_12760
so part of: sequence
location: 16167..16865
location: region:16167-16865:1
so has part: feature:16167-16865:1:exon
subclass of: SO_0000010

position:16167:1
position: 16167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16865:1
position: 16865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16167-16865:1:exon

B840_RS12440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12440
old locus tag: B840_12760
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003860191.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent transcriptional regulator
translation: MDLSEITPVAQDYLKVIWAATEWGGPPITATALAARMGTTTPNVSDTVKRLAAQGLVEYQPYKPVMLTERGEKYAIAMVRRHRLLETFLATTLGYPWEEVHDEAERLEHAASETMIERIEALLGNPATDPHGDPIPTATGQISRSINATRLTHATPGDYEIIRISDADSSQLAGFRRQEIVPGAIVNVAGAGPHQDRVLLTDADGKAVVLTPEQAGVIWVTPSPGVGGSTPF
SIO_010081: B840_RS12440
subclass of: SO_0000673
so part of: B840_RS12440
location: 16167..16865
location: region:16167-16865:1
so has part: feature:16167-16865:1:exon

WP_042622799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16167-16865:1:exon

B840_RS12445
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12445
old locus tag: B840_12765
so part of: sequence
location: 17052..17411
location: region:17052-17411:1
so has part: feature:17052-17411:1:exon
subclass of: SO_0000010

position:17052:1
position: 17052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17411:1
position: 17411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17052-17411:1:exon

B840_RS12445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12445
old locus tag: B840_12765
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011013963.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MLTIASRLDVMNRSGRAMADPTRSRIFLTLLEGPVYPAALARELDLTRSNVSNHLACLKDCGIVVAEPEGRQTRYEIVDAHLVQALNSLLDTTLAVDGNVPCLDSDCDVPGCDIGQAGA
SIO_010081: B840_RS12445
subclass of: SO_0000673
so part of: B840_RS12445
location: 17052..17411
location: region:17052-17411:1
so has part: feature:17052-17411:1:exon

WP_042622800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17052-17411:1:exon

B840_RS12450
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12450
old locus tag: B840_12770
so part of: sequence
location: 17411..18007
location: region:17411-18007:1
so has part: feature:17411-18007:1:exon
subclass of: SO_0000010

position:18007:1
position: 18007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17411-18007:1:exon

B840_RS12450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12450
old locus tag: B840_12770
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003859025.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cadmium resistance transporter
translation: MVTSLLSAIGLFIATNIDDIIVLSLFFARGAGQAGTTLRILAGQYLGFAGILAASVLVTIGADAFLPTEAIPYFGLIPLALGLWAAWQAWRGDDDDDDDATVSGKNVGILTVAGVTFANGGDNIGVYVPVFLNVENATVIIYCIVFLILVAGLVLLAKFVATRPPIAEVLERWEHVLFPIVLISLGIFILVSGGAFGL
SIO_010081: B840_RS12450
subclass of: SO_0000673
so part of: B840_RS12450
location: 17411..18007
location: region:17411-18007:1
so has part: feature:17411-18007:1:exon

WP_042622801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17411-18007:1:exon

B840_RS13350
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13350
pseudo: true
so part of: sequence
location: complement(<18087..>18286)
location: region:18087-18286:-1
so has part: feature:18087-18286:-1:exon
subclass of: SO_0000010

position:18087:-1
position: 18087
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:18286:-1
position: 18286
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18087-18286:-1:exon

B840_RS13350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011113078.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: B840_RS13350
subclass of: SO_0000673
so part of: B840_RS13350
location: complement(<18087..>18286)
location: region:18087-18286:-1
so has part: feature:18087-18286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18087-18286:-1:exon

B840_RS13630
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13630
pseudo: true
so part of: sequence
location: <18322..18432
location: region:18322-18432:1
so has part: feature:18322-18432:1:exon
subclass of: SO_0000010

position:18322:1
position: 18322
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:18432:1
position: 18432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18322-18432:1:exon

B840_RS13630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13630
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004600969.1
GO function: GO:0016603 - glutaminyl-peptide cyclotransferase activity [Evidence IEA]
GO process: GO:0017186 - peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutaminyl-peptide cyclotransferase
SIO_010081: B840_RS13630
subclass of: SO_0000673
so part of: B840_RS13630
location: <18322..18432
location: region:18322-18432:1
so has part: feature:18322-18432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18322-18432:1:exon

B840_RS12455
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12455
old locus tag: B840_12780
so part of: sequence
location: 18444..18974
location: region:18444-18974:1
so has part: feature:18444-18974:1:exon
subclass of: SO_0000010

position:18444:1
position: 18444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18974:1
position: 18974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18444-18974:1:exon

B840_RS12455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12455
old locus tag: B840_12780
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005279829.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2771 domain-containing protein
translation: MSTPKKARQRSLLQFLALLVAVVVIILAAILAQNWWNNRLGPAPQDITVTARVGDASIEVSPYLVCEPGLECPEGEVPNLPVGPDDTLLLEIPEAIHDHDWQLLMIYDDPAANDQQLHGPYDTEQVEIPGSVDPLTEGDPRPRLMVVEISSAQIGLDADGEETPYATVWSLSTMAD
SIO_010081: B840_RS12455
subclass of: SO_0000673
so part of: B840_RS12455
location: 18444..18974
location: region:18444-18974:1
so has part: feature:18444-18974:1:exon

WP_042622802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18444-18974:1:exon

B840_RS12460
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12460
old locus tag: B840_12785
so part of: sequence
location: 19044..19583
location: region:19044-19583:1
so has part: feature:19044-19583:1:exon
subclass of: SO_0000010

position:19044:1
position: 19044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19583:1
position: 19583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19044-19583:1:exon

B840_RS12460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12460
old locus tag: B840_12785
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPPGSDRQWSAAEALLHSFPTSLGLAPRAVRLAKRGVTRVNYAFLASEIDENDPSLHCAARLADSWGVDLRVFAFSPSGLADQSFHDKFDFTSELIDEWREHSLAVMDRSYDVLGEFFPDLSGDSDIGSGKAGRVRSMHSRGRRVICSSSAPPHPARGNEFSSVSPPPNSSGTSTSPFC
SIO_010081: B840_RS12460
subclass of: SO_0000673
so part of: B840_RS12460
location: 19044..19583
location: region:19044-19583:1
so has part: feature:19044-19583:1:exon

WP_052491232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19044-19583:1:exon

B840_RS12465
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12465
old locus tag: B840_12790
so part of: sequence
location: 19626..20165
location: region:19626-20165:1
so has part: feature:19626-20165:1:exon
subclass of: SO_0000010

position:19626:1
position: 19626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20165:1
position: 20165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19626-20165:1:exon

B840_RS12465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12465
old locus tag: B840_12790
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005519148.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNGRDPETNSPQRPQSDGRRRRYFLDHPENDLTADADFANRRPPAPRTAEEVASSTDPVLQADRNTMSTRQAFTWLFGTIIATVVVAYVLAWVARLMGGPVCDAGDALWLCSRSSQIWWPLVTSLVPAAGVIGCAIIMVRKLNSFTRWRPWMGVFWVLIPFAMMWMLQTWQIFIPALTD
SIO_010081: B840_RS12465
subclass of: SO_0000673
so part of: B840_RS12465
location: 19626..20165
location: region:19626-20165:1
so has part: feature:19626-20165:1:exon

WP_229676667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19626-20165:1:exon

B840_RS13925
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13925
pseudo: true
so part of: sequence
location: <20195..>20278
location: region:20195-20278:1
so has part: feature:20195-20278:1:exon
subclass of: SO_0000010

position:20195:1
position: 20195
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:20278:1
position: 20278
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20195-20278:1:exon

B840_RS13925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014923407.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transcriptional regulator
SIO_010081: B840_RS13925
subclass of: SO_0000673
so part of: B840_RS13925
location: <20195..>20278
location: region:20195-20278:1
so has part: feature:20195-20278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20195-20278:1:exon

B840_RS12470
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12470
old locus tag: B840_12795
so part of: sequence
location: complement(20289..21005)
location: region:20289-21005:-1
so has part: feature:20289-21005:-1:exon
subclass of: SO_0000010

position:20289:-1
position: 20289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21005:-1
position: 21005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20289-21005:-1:exon

B840_RS12470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12470
old locus tag: B840_12795
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003860224.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MAAAIGAVSTAGIGGAAAGTLQADSAAAQKSFTADYQLANDSQQVLYPETDSAPQILTIAEHKPVDNLDEQLNKSIELAAERAAAEAEAIATAEAEAAAAEAELAAQAPSASVVKPTEGTFTSGFGMRWGSLHAGLDIANVVGTPILAAMGGTVIDSGPASGFGQWIRIQHDDGSIAVYGHMETLDVSVGEQVTAGQKIAGMGNRGFSTGSHLHFELYPTGSGAVDPAPWFAQHGITF
SIO_010081: B840_RS12470
subclass of: SO_0000673
so part of: B840_RS12470
location: complement(20289..21005)
location: region:20289-21005:-1
so has part: feature:20289-21005:-1:exon

WP_188656965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20289-21005:-1:exon

B840_RS12475
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12475
old locus tag: B840_12815
so part of: sequence
location: complement(21891..22169)
location: region:21891-22169:-1
so has part: feature:21891-22169:-1:exon
subclass of: SO_0000010

position:21891:-1
position: 21891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22169:-1
position: 22169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21891-22169:-1:exon

B840_RS12475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12475
old locus tag: B840_12815
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003847971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SHOCT domain-containing protein
translation: MHWDGDHMGGWGMGMGWLVLALLVLGIVVLIMIMVGIFRGGIGRGPGGDDRAQGPERNRARDMLDERYARGEIDATEYDEKRRRLENRKDKD
SIO_010081: B840_RS12475
subclass of: SO_0000673
so part of: B840_RS12475
location: complement(21891..22169)
location: region:21891-22169:-1
so has part: feature:21891-22169:-1:exon

WP_042622803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21891-22169:-1:exon

B840_RS12480
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12480
old locus tag: B840_12820
so part of: sequence
location: complement(22645..24732)
location: region:22645-24732:-1
so has part: feature:22645-24732:-1:exon
subclass of: SO_0000010

position:22645:-1
position: 22645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24732:-1
position: 24732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22645-24732:-1:exon

B840_RS12480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12480
old locus tag: B840_12820
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006841231.1
GO function: GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MSTPDHGHDPGQPHAPNGPPTALTPTVPTTPTDDHAHGSARWELGFSIAAGVTYAGGMIAQFALGLPMVGWPLAFFLATYFFGGFFTIRTAISSTLRGKFEVDFLMLVAAVGAALIGRWAEGAVLLFLFSLGHALEEYALSRASKSIEALAELAPRHALVRRGDTEPVEVPVEELVVGDIVVIRPNSRIPSDGFVISGMSAVDQSAVTGESIPVEKEPVADPQRTMHTIDTLPAANRVFAGTVNGSGVLEIEVTATAADSTLSKVVELVRTADQAASPTQQFIDRFQRWYVPAVILGVIATLLVSMFVFAQLFSDAFYLAMTVLVAASPCALAIATPAAVLAGVARAARAGVLVKGGAPLETLGRVKAIAFDKTGTLTWGAPRVTSLAPANDTSEAELIPTLVAVESLSDHPLAAAIVRDLAPRVPETERLVATDLSALTGRGITATIDGERVEVGNLRMFDEQQLKLPPSLAEAYTKARDSGQTLMVVRRGDRFLGVVGVMDASRNESAQVLSMLRDTGVGHLVMISGDNQRVADAVGREVGVDTAIGELLPEDKVTHITGLAKTYHPIAMVGDGVNDAPAMARADVGIAMGAAGSTVALETCDIALMSDDLGRVPFAVRLSRATGQIIRQNLIASLAVVVVLIIATFLGLNIGAVVLIHEGSTLIVVANALRLLNFQKGKEHAGIDHEDKPTH
SIO_010081: B840_RS12480
subclass of: SO_0000673
so part of: B840_RS12480
location: complement(22645..24732)
location: region:22645-24732:-1
so has part: feature:22645-24732:-1:exon

WP_042622804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22645-24732:-1:exon

B840_RS12485
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12485
old locus tag: B840_12825
so part of: sequence
location: complement(24856..25896)
location: region:24856-25896:-1
so has part: feature:24856-25896:-1:exon
subclass of: SO_0000010

position:24856:-1
position: 24856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25896:-1
position: 25896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24856-25896:-1:exon

B840_RS12485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12485
old locus tag: B840_12825
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006841230.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SURF1 family protein
translation: MAVSSTRERRYERTAQKKGWRTFLRPGWVFGVLAIIAFSYFSFTFLAPWQLSRDGAIVERNDQIEAAFEVEPVPARKVFDAQGSIEPEEEWARVILEGHYLPEDEVLMRNRPVDSSPAFHALTPFQLNSGEVILVNRGFQPPFEGGVPPMDTPPTGEQSILGHARFAEQTPMSPPIEDQGYRQVYGINTEQIAEVTGTDLAQDYVQLAEGQAGEINAIPVPMLDRGSHLSYAFQWIAFGIMAPLGLGYFIWAELKERRRVRREEVELSVDAASAEQTTDQQDGDTDSGTMGTLRTPLLENDTPGPAPTETTTSASSGDRSRMLHDRYGDSRPDHSRKFARRQRERF
SIO_010081: B840_RS12485
subclass of: SO_0000673
so part of: B840_RS12485
location: complement(24856..25896)
location: region:24856-25896:-1
so has part: feature:24856-25896:-1:exon

WP_042622805.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24856-25896:-1:exon

B840_RS12490
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12490
old locus tag: B840_12830
so part of: sequence
location: complement(25961..27934)
location: region:25961-27934:-1
so has part: feature:25961-27934:-1:exon
subclass of: SO_0000010

position:25961:-1
position: 25961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27934:-1
position: 27934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25961-27934:-1:exon

B840_RS12490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12490
old locus tag: B840_12830
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770489.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cation-translocating P-type ATPase
translation: MDACCAPATATATRDHEEPTPWWRDRAILIPVASGLTLLLGLILEWFIPGAGLVATALFWVSLLLGASQFVPGALTGLFTRGKLGIGLLMTISATGAVLLGFIEEAAALAFLYSIAEALEDKAMDKARSGLRALLTLIPSTATIVAAHGGARTVQVEDLVPGDILRLAAGERLATDGVVRSGHSSLDVSAITGESIPVEVGPGDAVLAGSINTSGALEVKATAAGTDNSLTTVVKLVEQAQNDKGRRARIADRLARPLVPGVLILAILVAAIGSLLGDPGVWIERALVVLVAASPCALAISVPVTVVSAIGAASKFGVVIKSGAAFERLGGIRHLALDKTGTLTRNRPTVTEVLTTGGVSRAEVLDWAAALEAHSTHPLAAAITAAAPHPPVAQQVSEAAGQGITGVITGTRIAVGSPRWLSPGPLATEVESLEEQGMTVVIVHRDDQPVGIVGVRDELRPETPEVIRSLTAEGFGITMLTGDNTRTAQALAVEAGIQDVRAQLRPEDKARAVADLHERGPVAMIGDGINDAPALASADIGIAMGARGSDAAIESADVAFTGDDLRLIPRALHHARRGRAIINQNIVLSLAIIIVLLPLAITGVLGLAAVVLVHEVAEVIVITNGLRAARTKHPDLNPVATATVPTDEDAHGKTRVY
SIO_010081: B840_RS12490
subclass of: SO_0000673
so part of: B840_RS12490
location: complement(25961..27934)
location: region:25961-27934:-1
so has part: feature:25961-27934:-1:exon

WP_042622806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25961-27934:-1:exon

B840_RS12495
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12495
old locus tag: B840_12835
so part of: sequence
location: complement(27939..28298)
location: region:27939-28298:-1
so has part: feature:27939-28298:-1:exon
subclass of: SO_0000010

position:27939:-1
position: 27939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28298:-1
position: 28298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27939-28298:-1:exon

B840_RS12495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12495
old locus tag: B840_12835
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402251.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MLTIASRLDVMNRLGRAMADPTRSRILLSLLDAPNYPAQLARELGLTRSNVSNHLTCLRDCGIVVAEPEGRRTRYDIADAHLAQALTALLETTLAVDESAPCLDPSCPVEGCCDATEGR
SIO_010081: B840_RS12495
subclass of: SO_0000673
so part of: B840_RS12495
location: complement(27939..28298)
location: region:27939-28298:-1
so has part: feature:27939-28298:-1:exon

WP_042622807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27939-28298:-1:exon

B840_RS12500
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12500
old locus tag: B840_12840
so part of: sequence
location: complement(28472..29047)
location: region:28472-29047:-1
so has part: feature:28472-29047:-1:exon
subclass of: SO_0000010

position:28472:-1
position: 28472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29047:-1
position: 29047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28472-29047:-1:exon

B840_RS12500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12500
old locus tag: B840_12840
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003860216.1
GO component: GO:0042597 - periplasmic space [Evidence IEA]
GO function: GO:0005507 - copper ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper resistance protein CopC
translation: MIISPMLPRRVIAAVVAVGALSVVATPAALAHDSVIGGNPADGEVVEEFPRSIELEFSGLPQEGFSTVAITDQDSGDLLFSGEPTIKDRLVTLDLPADISGGPGDYTVGFQILSSDGHATRSSTTFTVAGDAAAATTGDAEPVEETPAAENTAEEDTSGWSDLIVPTLVGLAVFGAIAGAGVLVVRRRDAR
SIO_010081: B840_RS12500
subclass of: SO_0000673
so part of: B840_RS12500
location: complement(28472..29047)
location: region:28472-29047:-1
so has part: feature:28472-29047:-1:exon

WP_035120001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28472-29047:-1:exon

B840_RS12505
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12505
old locus tag: B840_12845
so part of: sequence
location: 29347..31413
location: region:29347-31413:1
so has part: feature:29347-31413:1:exon
subclass of: SO_0000010

position:29347:1
position: 29347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31413:1
position: 31413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29347-31413:1:exon

B840_RS12505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12505
old locus tag: B840_12845
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003847987.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c oxidase assembly protein
translation: MTHPVSDNTIPTVTEATAGKAPTTGRRPQEHVRPTWPLYLLFLAVAGAIGGTIAYRFLGESLAALGIPDPGIATTFGLPFFRAVGWMLAALSAGSFLFSAFLISPRLPGGDNDRLHQASLSVDGHLASRTGAVAALCFGLVALLMIPLVLSDVSGTPLAQTLGMEALVVALQQVAMAQVWLIVALIALVTGLTGMMSRAWITQPLLLLGAILMVVPLGLTGHSSSGGNHDHGTNSYLWHLIFLVIWIGGLMALLAHGRRLGPDLNIALRRYSTIALVSIIIMAVSGLVNAAIRIELTDLLTTRYGLIIVAKTIGVIILGVFGWIHRAWVIPQVQADPTDHRLFRQVAIVEILVMAAVTGIAITMGRTPPPPPRIPNLSQMATELGYELSEKPTALNVWGMWRFDLLFGTLALLLAAGYLYAVWRTHQAGRTWSTTSTAWWLAGCVTLLATMSSGIGMNMPASFSMHMLGHMILSLVIPIFLVLGAPLTLLMTAYDSDPAGRPGIHDWVCAFTRSRLVAMITHPVVNTMQFLFFFYVMYLLIPLYELLISEHAGHLIMNTVLLVSGCFYFWGMCGPDPLPHRRPAAVRLGWLIASLPVHLLFGVYLLQLDTILGQAFYRSLLLPWELDLLADQRAAVLAWAAGVIPLAFVVFLLSRQVRGRGDSTRGVEEVATPDTGGTGTPSLSPPAK
SIO_010081: B840_RS12505
subclass of: SO_0000673
so part of: B840_RS12505
location: 29347..31413
location: region:29347-31413:1
so has part: feature:29347-31413:1:exon

WP_084603124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29347-31413:1:exon

B840_RS12510
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12510
old locus tag: B840_12850
so part of: sequence
location: 31752..32516
location: region:31752-32516:1
so has part: feature:31752-32516:1:exon
subclass of: SO_0000010

position:31752:1
position: 31752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32516:1
position: 32516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31752-32516:1:exon

B840_RS12510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12510
old locus tag: B840_12850
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018297431.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MRLTAQRPARGKHRKITTSQTTGRVALVAVAAGAVSTAGIGGATAATLQAQDQAPASSEVAAVDVELAATDTALPLDATQVAPQILAISEYKPVANLEEQLDKAVEYAAERTEAAAAEAAAAQAPSASVVKPTEGTFTSGFGMRWGSLHAGLDIANVVGTPILAAMGGTVIDSGPASGFGQWIRIQHDDGSIAVYGHMETLDVSVGEQVTAGQKIAGMGNRGFSTGSHLHFELYPTGSGAVDPAPWFAQHGITF
SIO_010081: B840_RS12510
subclass of: SO_0000673
so part of: B840_RS12510
location: 31752..32516
location: region:31752-32516:1
so has part: feature:31752-32516:1:exon

WP_042622809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31752-32516:1:exon

B840_RS12515
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12515
old locus tag: B840_12855
so part of: sequence
location: 32661..32993
location: region:32661-32993:1
so has part: feature:32661-32993:1:exon
subclass of: SO_0000010

position:32661:1
position: 32661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32993:1
position: 32993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32661-32993:1:exon

B840_RS12515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12515
old locus tag: B840_12855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402255.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metalloregulator ArsR/SmtB family transcription factor
translation: MSTVALPHISALSRMGHALSDDTRTGILLALRHGPARPSELARQLDVSKQVMSNQLACLRGCGLVVSTPQGRNVWYSLADPRLGHALGELLELVVTIDPACCSPDGCTCS
SIO_010081: B840_RS12515
subclass of: SO_0000673
so part of: B840_RS12515
location: 32661..32993
location: region:32661-32993:1
so has part: feature:32661-32993:1:exon

WP_042622810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32661-32993:1:exon

B840_RS12520
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12520
old locus tag: B840_12860
so part of: sequence
location: 33091..33798
location: region:33091-33798:1
so has part: feature:33091-33798:1:exon
subclass of: SO_0000010

position:33091:1
position: 33091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33798:1
position: 33798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33091-33798:1:exon

B840_RS12520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12520
old locus tag: B840_12860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015453104.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin domain-containing protein
translation: MSTPTNPTTSTRPSGNWRKAQIIVWALLAVVVIAGIVAFLLGRADSTSAPAPETVASDAGLVVRDNSRVLSQAPNEKAVLVEFLDFECEACRAAYPFVEDLRAEYSDSVTFIHRYFPLPGHRNSLPAAVAVEAAGQQGQYEAMYHRMFETQSEWGESSEDNSAVFRGFAEDLGLDMAAYDAAVADPATEERVQLDVADGKALGVPGTPTFFLDGQLLTPDSLEQFRAEVDAAAAD
SIO_010081: B840_RS12520
subclass of: SO_0000673
so part of: B840_RS12520
location: 33091..33798
location: region:33091-33798:1
so has part: feature:33091-33798:1:exon

WP_042622811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33091-33798:1:exon

B840_RS12525
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12525
old locus tag: B840_12865
so part of: sequence
location: 33808..34461
location: region:33808-34461:1
so has part: feature:33808-34461:1:exon
subclass of: SO_0000010

position:33808:1
position: 33808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34461:1
position: 34461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33808-34461:1:exon

B840_RS12525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12525
old locus tag: B840_12865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770482.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: vitamin K epoxide reductase family protein
translation: MTHSPTAEDETEVLVTETNTATSLPAVARDRPFALILLITGVIGWVASGILVLERLALYEDAEHVTTCDINALVSCGKVMGTWQSELLGFPNPLIGIVAFAVVITTAMAMLSGARFADWYWGALQAGVTVGLLFIVWLWYQALFVIHILCLYCLVVWAMMVPLFILLTVRNLAHGLFPASPAVVRFSSQWAGTLIAVVYVAVAASVFFSFYSDFITL
SIO_010081: B840_RS12525
subclass of: SO_0000673
so part of: B840_RS12525
location: 33808..34461
location: region:33808-34461:1
so has part: feature:33808-34461:1:exon

WP_042622812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33808-34461:1:exon

B840_RS12530
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12530
old locus tag: B840_12870
pseudo: true
so part of: sequence
location: 34706..35414
location: region:34706-35414:1
so has part: feature:34706-35414:1:exon
subclass of: SO_0000010

position:34706:1
position: 34706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35414:1
position: 35414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34706-35414:1:exon

B840_RS12530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12530
old locus tag: B840_12870
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011015522.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: VIT family protein
SIO_010081: B840_RS12530
subclass of: SO_0000673
so part of: B840_RS12530
location: 34706..35414
location: region:34706-35414:1
so has part: feature:34706-35414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34706-35414:1:exon

B840_RS12535
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12535
old locus tag: B840_12875
so part of: sequence
location: 35785..36195
location: region:35785-36195:1
so has part: feature:35785-36195:1:exon
subclass of: SO_0000010

position:35785:1
position: 35785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36195:1
position: 36195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35785-36195:1:exon

B840_RS12535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12535
old locus tag: B840_12875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006768635.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF302 domain-containing protein
translation: MSYTHTVTVALSYEDATARTREALAEQGFGVLTEVDIKATFHKKLGAAAAEAVGDYVILGACNPTLASKALAAEPELGALLPCNVVVRRGPGDERTTVEAIDPQTMVKLSASDQVREVADDADTRLQAALEAISGA
SIO_010081: B840_RS12535
subclass of: SO_0000673
so part of: B840_RS12535
location: 35785..36195
location: region:35785-36195:1
so has part: feature:35785-36195:1:exon

WP_042622813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35785-36195:1:exon

B840_RS12540
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12540
old locus tag: B840_12880
so part of: sequence
location: 36321..37004
location: region:36321-37004:1
so has part: feature:36321-37004:1:exon
subclass of: SO_0000010

position:36321:1
position: 36321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37004:1
position: 37004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36321-37004:1:exon

B840_RS12540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12540
old locus tag: B840_12880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015650353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF305 domain-containing protein
translation: MKRTITLSTLTLVAALTLAACGQGAETGDTGTLTTSTETVTRSTETTTGTTTAQAPGEIAGEHNNADVMFTRMMIPHHQQALEMSEILLAKDDIPGEVAGFAERVVDTQTAEIDQMNAMLETWDWQPGSGNMGNMGSGNMGNMGSGNMGDMGDMMDREGMTALENAEGAEAVRLYLEHMIPHHEGAIDMARNQVNNGDNPQAIALAEQMITTQEAEITEMKQMLQNL
SIO_010081: B840_RS12540
subclass of: SO_0000673
so part of: B840_RS12540
location: 36321..37004
location: region:36321-37004:1
so has part: feature:36321-37004:1:exon

WP_042622851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36321-37004:1:exon

B840_RS12545
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12545
old locus tag: B840_12885
so part of: sequence
location: 37348..38235
location: region:37348-38235:1
so has part: feature:37348-38235:1:exon
subclass of: SO_0000010

position:37348:1
position: 37348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38235:1
position: 38235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37348-38235:1:exon

B840_RS12545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12545
old locus tag: B840_12885
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018296659.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MPTVPTSARHDLTNAEWDLLDPLLPAASPTGRPRTWGLRSLVNGIFFRIRTGCPWRDVHERYGPWWRVYDLFVRLRADGVWQDVHTRLLAQAQHTGKLSWEVSVDSTTSLGHVHAAGARNDSATRHSGEPAHHGFGRSRGGWSTKIHVGVNADCGVMSLVITPGQAGDGPQMVPVLEKIRVPSARRGRPRRRPDRVLADKAYSSRANRKYLRSRGIKATISQPRDQVAHRRRRGSAGGRPPAFDTVAYRRRNAVERGINRIKQHRGCATRFDKLAVHFEATVQLAVIRYWLKRLS
SIO_010081: B840_RS12545
subclass of: SO_0000673
so part of: B840_RS12545
location: 37348..38235
location: region:37348-38235:1
so has part: feature:37348-38235:1:exon

WP_042622814.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37348-38235:1:exon

B840_RS13640
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13640
pseudo: true
so part of: sequence
location: 38339..>38422
location: region:38339-38422:1
so has part: feature:38339-38422:1:exon
subclass of: SO_0000010

position:38339:1
position: 38339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38422:1
position: 38422
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38339-38422:1:exon

B840_RS13640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13640
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770492.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: B840_RS13640
subclass of: SO_0000673
so part of: B840_RS13640
location: 38339..>38422
location: region:38339-38422:1
so has part: feature:38339-38422:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38339-38422:1:exon

B840_RS12550
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12550
old locus tag: B840_12890
so part of: sequence
location: complement(38438..38782)
location: region:38438-38782:-1
so has part: feature:38438-38782:-1:exon
subclass of: SO_0000010

position:38438:-1
position: 38438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38782:-1
position: 38782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38438-38782:-1:exon

B840_RS12550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12550
old locus tag: B840_12890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402270.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-sensitive transcriptional regulator
translation: MNALTPDQTVPIDEAAGTCHTTHGYITDKDRYLARLKRIEGQVRGIHRMVDEEQYCIDILTQVSAVNSALRNVALGLLDDHIKHCMYEAIQLGDEAADAKLQEVTDAIARFARS
SIO_010081: B840_RS12550
subclass of: SO_0000673
so part of: B840_RS12550
location: complement(38438..38782)
location: region:38438-38782:-1
so has part: feature:38438-38782:-1:exon

WP_084603125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38438-38782:-1:exon

B840_RS12555
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12555
old locus tag: B840_12895
so part of: sequence
location: complement(38872..41226)
location: region:38872-41226:-1
so has part: feature:38872-41226:-1:exon
subclass of: SO_0000010

position:38872:-1
position: 38872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41226:-1
position: 41226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38872-41226:-1:exon

B840_RS12555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12555
old locus tag: B840_12895
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402272.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]
GO process: GO:0006812 - monoatomic cation transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MTQTQPAVDLLQIDLGVTGMTCTSCSSRVERKLNKLDGVEATVNFATESASVRYDPAKVNPDNLIETVKTTGYGAFTMSGATDDGGDNTNDAATGASGSSGAQSQVDAARENEAADLKKRLIISALLTVPIVLLSMIPALQFTNWQWAVLTMTTPVFFWGGAPFHRATLVNLRHGATTMDTLITLGTGAAYLWSLWALFIGNAGHPGMTMEIHLLPTNSTMDEIYLETAAVVISFLLLGRWFETKAKGQSSAALRKLLDMGAKDAAVLRDGAEVRVPVSQLKIGDVFVVRPGEKIATDGRVTEGSSAVDESMLTGESVPVEVTAGSKVTGATLNTSGRLLVEVTRTGADTTLAQMAKLVTDAQAKKAPVQRLVDRISAVFVPVVIVISILTLLTHTFLLDAGLATAFTAAVAVLIIACPCALGLATPTALLVGTGRGAELGLLIKGPEVLESTKKVDTIVMDKTGTVTTGVMSVTGVTVADGFDRDDVLTKAAAVEFASEHPIAQAIAREGGRTRTLPEVTDFANTAGRGVTGTVEGHSVTVGRPAGELTGLLQDAFTHAQTLGGTPVVVQINGRNAGVITVRDTAKPTSAAAVAGLKELGLTPMLLTGDNAGAAQAVAAEVGIDPAHVIAEVMPEDKVRVIERLQKQGKNVAMVGDGINDAAALAQADLGLAMGAGTDVAIEASDITLMNSDLRSAVDAIRLSRRTLGTIKGNLFWAFAYNVALIPVAAIGLLNPILAGIAMAFSSVFVVSNSLRLRGFRSSHGATSPAPHTTEASPRQPVNA
SIO_010081: B840_RS12555
subclass of: SO_0000673
so part of: B840_RS12555
location: complement(38872..41226)
location: region:38872-41226:-1
so has part: feature:38872-41226:-1:exon

WP_042622815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38872-41226:-1:exon

B840_RS12560
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12560
old locus tag: B840_12900
so part of: sequence
location: complement(41420..41629)
location: region:41420-41629:-1
so has part: feature:41420-41629:-1:exon
subclass of: SO_0000010

position:41420:-1
position: 41420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41629:-1
position: 41629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41420-41629:-1:exon

B840_RS12560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12560
old locus tag: B840_12900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402273.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy-metal-associated domain-containing protein
translation: MATVTKNYMVKGMTCGHCKSSVEEEVREVAGVNSVEANPGTGRVEVTGENFTDEDVAAAIKEAGYTLKP
SIO_010081: B840_RS12560
subclass of: SO_0000673
so part of: B840_RS12560
location: complement(41420..41629)
location: region:41420-41629:-1
so has part: feature:41420-41629:-1:exon

WP_042622816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41420-41629:-1:exon

B840_RS12565
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12565
old locus tag: B840_12905
so part of: sequence
location: 42338..43084
location: region:42338-43084:1
so has part: feature:42338-43084:1:exon
subclass of: SO_0000010

position:42338:1
position: 42338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43084:1
position: 43084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42338-43084:1:exon

B840_RS12565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12565
old locus tag: B840_12905
EC number: 3.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018297431.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MRLTAQRAPRGKHRKITTSQTKGRVALVAVAASAVSSAGIGGATAATLQAQDESPASSEVTTVDVELAANDAALSFDATQVAPQILAIPEYKPVANVDEQLDKAVEYAVERTEADRAARAPSVVKPAEGIFTSDFGMRWGSLHQGIDIANAVGTPILAAMGGTVIDSGPASGFGQWIRIQHDDGSIAVYGHMETLDVSVGEQVTAGQKIAGMGNRGFSTGSHLHFELYPTGSGAVDPTPWFAEHGITF
SIO_010081: B840_RS12565
subclass of: SO_0000673
so part of: B840_RS12565
location: 42338..43084
location: region:42338-43084:1
so has part: feature:42338-43084:1:exon

WP_042622817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42338-43084:1:exon

B840_RS12570
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
gene: lnt
locus tag: B840_RS12570
old locus tag: B840_12910
so part of: sequence
location: complement(43703..45265)
location: region:43703-45265:-1
so has part: feature:43703-45265:-1:exon
subclass of: SO_0000010

position:43703:-1
position: 43703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45265:-1
position: 45265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43703-45265:-1:exon

B840_RS12570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
gene: lnt
locus tag: B840_RS12570
old locus tag: B840_12910
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402276.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO process: GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: apolipoprotein N-acyltransferase
translation: MAGHSALMVGAAVAWWLALPPRGWWVLFPVGVTVFMLALAGQPLRNRLWLGGLSGVVHYALVLRWLTDFNTAGYVAVVAIQTLLLMLVAAVSSSEPAFRGRWPVWWLLTPAALVILEAVQHRFPFGGFPLPAFGYSQADGPFMAAAPLGGTLLTTALAAVAGAVVAAVILERKRARGLSVLAIVVLLAVPGFAPVIVDDAVEDTLEVVLVQGGGPRGLRAVHTDPFDTTRRHLQTAADITGTPDLVLMPENVANVDETVDGTVVDASFAELARQLDTNVVVGITESDGEHFRNASILWGPDGTRSGRYEKHHRVPFGEYLPMRNLIERLSDDARFIPRDAVIGEGPAVLDPSGAPRLGIVISYEVFFADRVADAVRNGGQLLLAPTNAASFMTEEVPAIEVAASRMRASEFGRTVLQAAPTGYSAIIQPNGTVSQLSDLSTSELLTATVPLHTGLTPYARMGDTPMLILALLALAWPLVSDLVSWLRGRRGQGGISSRQIPSPPSYVDGMLALAASDERA
SIO_010081: B840_RS12570
subclass of: SO_0000673
so part of: B840_RS12570
location: complement(43703..45265)
location: region:43703-45265:-1
so has part: feature:43703-45265:-1:exon

WP_229676668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43703-45265:-1:exon

B840_RS12575
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
gene: ccsB
locus tag: B840_RS12575
old locus tag: B840_12915
so part of: sequence
location: complement(45473..46501)
location: region:45473-46501:-1
so has part: feature:45473-46501:-1:exon
subclass of: SO_0000010

position:45473:-1
position: 45473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46501:-1
position: 46501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45473-46501:-1:exon

B840_RS12575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
gene: ccsB
locus tag: B840_RS12575
old locus tag: B840_12915
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006841222.1
GO function: GO:0020037 - heme binding [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: c-type cytochrome biogenesis protein CcsB
translation: MPVNQTLATFSDTAFQTAFVIYLLALVLSLVHYVKMQGVIDARRAREVIAHPEYVAVGAGSGTADLSDRSTGDVADDPVLTDEQCAAREASADKFGGMTQTVVWLGAVVHLVSVVLRGLATDRFPLGNMYEYISMICVLAVLTAAITIQRREWRSVWPWLLVPVLVMLFFAGTSLYADSAPVVPALQSYWLPIHVSTVSVGAAIGIVSGIASLLYLLRIWQPKGAERGFFGAVAKPLPSAKKLDGLAYKSAIITLPVLGLGIVLGAIWAEAAWGRFWGWDPKETASFISWVLYAAYLHARATAGWRDHKAAWINILALATMIFNLFFINLVVSGLHSYAGLN
SIO_010081: B840_RS12575
subclass of: SO_0000673
so part of: B840_RS12575
location: complement(45473..46501)
location: region:45473-46501:-1
so has part: feature:45473-46501:-1:exon

WP_042622818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45473-46501:-1:exon

B840_RS12580
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12580
old locus tag: B840_12920
so part of: sequence
location: complement(46538..48217)
location: region:46538-48217:-1
so has part: feature:46538-48217:-1:exon
subclass of: SO_0000010

position:46538:-1
position: 46538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48217:-1
position: 48217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46538-48217:-1:exon

B840_RS12580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12580
old locus tag: B840_12920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402278.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0017004 - cytochrome complex assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c biogenesis protein ResB
translation: MITLMRTLWTYPKKAWHWLTSMRTALVLLFVLAIAAIPGTVLPQRSLNAGNVADYIADNGRLAEIYDHLQLFDVFESTWFNAIFMLLTISLIGCILPRSWEHYKAMKTPPTRAPKRLERLPLHATGTVDKPMDQLTDDARGLLKRWKVAEYTPDKDRAGVFSLSAERGHTRELANLIFHLSLVGMLVTIAAGRMVYYEGMVIIVTESGNYETPPIEQSTEFCNTSTANFDSFRAGPTFDGTGLTTFCFDAHDFTADYLTNGQAEMFTSNISYAIGEDILKPKEEWTDYQLQVNHPLRVAGDRIYLMGHGFAPTFTVTWPNGESRTQTLQFAPEDPTFFLSSGAMRFDPPAGMYPDIYDRRQNQIALEGLFAPTAEWGGDNGLLLTSAFPAMRDPAVAMDIYRGDAGLDTGRSQSIFELDPTLIATGQLQKIERVNLLQGEEVTLDDGTTVTFDGASEFANFQISHDPFQPWVLATTVIMLASLIGSLVIKRRRIWIRLQPSADGSSTVVEMGGLARTDSAGWGGEFDKLHRALLGLPDPDDIDEEAEENIPVLVTSASQ
SIO_010081: B840_RS12580
subclass of: SO_0000673
so part of: B840_RS12580
location: complement(46538..48217)
location: region:46538-48217:-1
so has part: feature:46538-48217:-1:exon

WP_084603126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46538-48217:-1:exon

B840_RS12585
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12585
old locus tag: B840_12925
so part of: sequence
location: complement(48316..49128)
location: region:48316-49128:-1
so has part: feature:48316-49128:-1:exon
subclass of: SO_0000010

position:48316:-1
position: 48316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49128:-1
position: 49128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48316-49128:-1:exon

B840_RS12585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12585
old locus tag: B840_12925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011013652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome c biogenesis CcdA family protein
translation: MTVDVMAQLAIGQQFADAAATGPLMIGILAAAAAGLISFASPCVVPLVPGYMSYLASVVGGEVDYDAEGGTVVTKRQWAVAGAAGLFILGFTIVFVLATVTVFGAISMLTLNAEILMRIGGVITILMGLAFMGMVPALQRDTRMAPKRWSTWLGAPLLGGVFALGWTPCLGPTLAAIISVSAGTEGMTAVRGVILIIGYCLGLGLPFLLMAFGSARAMRTFGWLRRHSRKIQIFGGVLMVLVGIALASGAWAYFINFVRQWTVEYGATLI
SIO_010081: B840_RS12585
subclass of: SO_0000673
so part of: B840_RS12585
location: complement(48316..49128)
location: region:48316-49128:-1
so has part: feature:48316-49128:-1:exon

WP_042622819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48316-49128:-1:exon

B840_RS12590
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12590
old locus tag: B840_12930
so part of: sequence
location: complement(49125..49739)
location: region:49125-49739:-1
so has part: feature:49125-49739:-1:exon
subclass of: SO_0000010

position:49125:-1
position: 49125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49739:-1
position: 49739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49125-49739:-1:exon

B840_RS12590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12590
old locus tag: B840_12930
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018021437.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TlpA disulfide reductase family protein
translation: MSRTPRRAAIAVAAVLTAVTLVACSSGDGARNAVAVGGTFQFHSPGGQTEIIYAEEERAPLPDFSGPSLMEEGEEISLSDFEGEVVVLNAWGQWCAPCRAEVDDLQLVQETLDPLGGTVLGINVRDYNQTIAQDFKLDNAVTYPSIYDPPFRIAAALGGVPTSVIPTTIVLDRSHRPAAVFLREVTADDILDVALPLAEEAPAS
SIO_010081: B840_RS12590
subclass of: SO_0000673
so part of: B840_RS12590
location: complement(49125..49739)
location: region:49125-49739:-1
so has part: feature:49125-49739:-1:exon

WP_042622820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49125-49739:-1:exon

B840_RS12595
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12595
old locus tag: B840_12935
so part of: sequence
location: complement(49892..51373)
location: region:49892-51373:-1
so has part: feature:49892-51373:-1:exon
subclass of: SO_0000010

position:49892:-1
position: 49892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51373:-1
position: 51373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49892-51373:-1:exon

B840_RS12595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12595
old locus tag: B840_12935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014319625.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multicopper oxidase family protein
translation: MTSSFSRRQFLLGGLVLAGTGAVAACTSDPGPAASAPGPSLRPTPTPTALGEPTVRRTLTARPLSLDIGGIEAKTWGYVSDTGDAAIEATAGDVLQVDITNELPESTSIHWHGIALHNAADGVPGMTQDPIEPGESFSYVFEVPHGGTYFYHSHTGLQLDRGLHAPLIIRDPQDAEDQDVEWTIVLDDWVDGIQGTPDDELDKLTGMGSGDHNGRMGMGGHGQMMHGTPDRVLGGDVGDVMYPHYLINGRIPRAHRTFEARPGDKARLRFINSGGDTIFKVALGGHRMTVTHTDGFPVQPWETESIYLSMGERVDVEVILGDGIFPLTALAVGKDDRAFAVIRTAGGQAPRPDVDFPELSSTGLLLSSLKPADRALLPEGTPDREVSIDLGGQMMPYEWSILTDGQSSSATVQEGQRLRMVMRNRTMMPHPMHIHGHTWALPGSGGLRKDTVLLRHGETMIADLIADNPGEWAFHCHNAYHMETGMVSSLRYE
SIO_010081: B840_RS12595
subclass of: SO_0000673
so part of: B840_RS12595
location: complement(49892..51373)
location: region:49892-51373:-1
so has part: feature:49892-51373:-1:exon

WP_003859486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49892-51373:-1:exon

B840_RS12600
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12600
old locus tag: B840_12940
so part of: sequence
location: complement(51444..52019)
location: region:51444-52019:-1
so has part: feature:51444-52019:-1:exon
subclass of: SO_0000010

position:51444:-1
position: 51444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52019:-1
position: 52019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51444-52019:-1:exon

B840_RS12600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12600
old locus tag: B840_12940
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006284600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CueP family metal-binding protein
translation: MKRAAIAAAALALALTGCSAADPEPTADGTVSQDTFLTTHGLAAMDAVEIIDHLDRQKVTERPTDLIASVRADELLLSSDDQEVVVDLPDNQTYVSVAPYITSTHDCFYHSLTTCLGELDNEDIQVTITDEATGEVLVDEATTTFDNGFIGFWLPDDATGLIEVSYQGRTGTTEFSTTDDGATCVTDLRLT
SIO_010081: B840_RS12600
subclass of: SO_0000673
so part of: B840_RS12600
location: complement(51444..52019)
location: region:51444-52019:-1
so has part: feature:51444-52019:-1:exon

WP_042622821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51444-52019:-1:exon

B840_RS12605
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12605
old locus tag: B840_12945
so part of: sequence
location: 52423..53145
location: region:52423-53145:1
so has part: feature:52423-53145:1:exon
subclass of: SO_0000010

position:52423:1
position: 52423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53145:1
position: 53145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52423-53145:1:exon

B840_RS12605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12605
old locus tag: B840_12945
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005391208.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator transcription factor
translation: MADRTPTTATPPGRVLVVDDEQPLAQMVASYLIRAGFDTRQAHTGTQAVDEARRFSPDVVVLDLGLPELDGLEVCRRIRTFSDCYILMLTARGSEDDKISGLTLGADDYITKPFSIRELVTRVHAVLRRPRTSTTPPQVTTPLIVGDLILDPVAHQVRVGETTVELTRTEFELLVALALRPGQVLTRHDLVTEVWDTTWVGDERIVDVHIGNLRRKLGTDTRGRGFIDTVRGVGYRVGQP
SIO_010081: B840_RS12605
subclass of: SO_0000673
so part of: B840_RS12605
location: 52423..53145
location: region:52423-53145:1
so has part: feature:52423-53145:1:exon

WP_003859491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52423-53145:1:exon

B840_RS12610
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12610
old locus tag: B840_12950
so part of: sequence
location: 53142..54329
location: region:53142-54329:1
so has part: feature:53142-54329:1:exon
subclass of: SO_0000010

position:53142:1
position: 53142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54329:1
position: 54329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53142-54329:1:exon

B840_RS12610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12610
old locus tag: B840_12950
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018296921.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO process: GO:0007165 - signal transduction [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAMP domain-containing sensor histidine kinase
translation: MNHGPGLTFRFLAAQVLVVVISLLVAAAVATMVGPTLFHDHMLMTGREDPSLELFHAEQAYRDANLITLAVALPTALISALLASLWLSRRLRTPLQDLTRAATSLTAGNYRIRVPAGEAGPEVTTLAQAFNTMADRLEHTEDLRRQMLSDLAHEMRTPVSVLSVYLDGLEDGVVDWDLATNSVMAEQLTRLTRLVEDIDDVSRAQENQMDLDVTEEDLGQLLHATAAAAQESYVDKGVGLQVEAATGTARVVVDPQRFGQVMGNLLTNALRHTPPGGQVTIGAARRGADSVLIKVTDTGDGMTADQLGHIFERFYRGDTARDRDHGGSGIGLTISRALVEAHGGTLTATSSGPGAGSIFTIALPLLPERTALMSADRPDETTILTTPRNIPHRGI
SIO_010081: B840_RS12610
subclass of: SO_0000673
so part of: B840_RS12610
location: 53142..54329
location: region:53142-54329:1
so has part: feature:53142-54329:1:exon

WP_042622822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53142-54329:1:exon

B840_RS12615
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12615
old locus tag: B840_12955
so part of: sequence
location: 54377..54718
location: region:54377-54718:1
so has part: feature:54377-54718:1:exon
subclass of: SO_0000010

position:54377:1
position: 54377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54718:1
position: 54718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54377-54718:1:exon

B840_RS12615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12615
old locus tag: B840_12955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011896427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy-metal-associated domain-containing protein
translation: MTTPTPPLLPMASDGCGCCAPSAPSTPSVKTSSAPAATKTNAGPDVPTVYQVTGMTCGHCAKSVTQALQALPQVDDVQIDLTAGGVSTVTVTGVVPPEMVRRAIEEAGYTVLS
SIO_010081: B840_RS12615
subclass of: SO_0000673
so part of: B840_RS12615
location: 54377..54718
location: region:54377-54718:1
so has part: feature:54377-54718:1:exon

WP_042622823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54377-54718:1:exon

B840_RS12620
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12620
old locus tag: B840_12960
so part of: sequence
location: 54769..56988
location: region:54769-56988:1
so has part: feature:54769-56988:1:exon
subclass of: SO_0000010

position:54769:1
position: 54769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56988:1
position: 56988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54769-56988:1:exon

B840_RS12620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12620
old locus tag: B840_12960
EC number: 3.6.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011015526.1
GO function: GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]; GO:0043682 - P-type divalent copper transporter activity [Evidence IEA]
GO process: GO:0006825 - copper ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: copper-translocating P-type ATPase
translation: MSTPHHHGDHPAPETDHTHHPDHAGHEHHADTDTHGQAMPHEHPHSALDEEHQVHSHGDHAGHSTAMFRKYFWWSLILSVPVVFFSPMFADLLGYSIPEIPGAYWIPPVLGTIIFLYGGTPFLKGAMTELKSRQPGMMLLIAMAITVAFLASWVTTLEIGGFHLDFWWELALLVTIMLLGHWLEMRALGAASSALDALAALLPDEAEKVEDGTTRTVAISELTVDDVVLVRAGARVPADGTIIDGAAEFDEAMITGESRPVYRDTGERVVAGTVATDNTVRIRVEATGGDTALAGIQRMVADAQASSSRAQALADRAAAFLFWFALITALITAVVWTIIGSPDDAVVRAVTVLIIACPHALGLAIPLVIAISSERAAKSGVLIKDRMALEHMRTIDVVLFDKTGTLTEGAHAVTGVAPATGIAEGELLALAAAAEADSEHPVARAIVTAAAAHPEASQRQLRATGFTAASGRGIRATVDGAEILVGGPNMLREFNLTTPGELTDITGSWAQRGAGVLHVVRDGEIIGAVAVEDKIRPESRAAVRALQARGVKVAMITGDATQVAQAVGKDLGIDEVFAEVLPQDKDTKVTQLQERGLSVAMVGDGVNDAPALARAEVGIAIGAGTDVAMESAGVVLASDDPRAVLSMIELSHASYRKMVQNLVWATGYNIVAVPLAAGVLAPIGVLLPPAAAAILMSLSTIIVALNAQLLRRIDLDPAHLAPTDRKEEKAAVSSAATVR
SIO_010081: B840_RS12620
subclass of: SO_0000673
so part of: B840_RS12620
location: 54769..56988
location: region:54769-56988:1
so has part: feature:54769-56988:1:exon

WP_042622824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54769-56988:1:exon

B840_RS12625
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12625
old locus tag: B840_12965
so part of: sequence
location: 57046..57708
location: region:57046-57708:1
so has part: feature:57046-57708:1:exon
subclass of: SO_0000010

position:57046:1
position: 57046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57708:1
position: 57708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57046-57708:1:exon

B840_RS12625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12625
old locus tag: B840_12965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015650353.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF305 domain-containing protein
translation: MKRTITIAALALTSTLVLSACADNTEGENTDTTTIATTSAPDTTETTGATTDPETETGAAGEVSAEHNDADIMFAQMMIPHHQQAVEMSEILLAKDDIPAEVIEFAQGVIDAQGPEIDRMNTMLETWEEDPVTGDMGEMDHGGMSGMMSEEDMTALEDAQGTEAARLYLEQMTAHHEGAVDMARDEVTDGQNPQAIALAEQVIEDQEAEIAEMEQMLNKL
SIO_010081: B840_RS12625
subclass of: SO_0000673
so part of: B840_RS12625
location: 57046..57708
location: region:57046-57708:1
so has part: feature:57046-57708:1:exon

WP_042622825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57046-57708:1:exon

B840_RS12630
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12630
old locus tag: B840_12970
so part of: sequence
location: 57796..58848
location: region:57796-58848:1
so has part: feature:57796-58848:1:exon
subclass of: SO_0000010

position:57796:1
position: 57796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58848:1
position: 58848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57796-58848:1:exon

B840_RS12630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12630
old locus tag: B840_12970
EC number: 1.2.1.59
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018296924.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II glyceraldehyde-3-phosphate dehydrogenase
translation: MPTRIKVAVNGYGVIGKRVADAVRAQEDMELLGVSDVTTDYRVATAITLGIPVYASTEKSHQEMSAAGYPVAGHLPDLLDDADVVVDCTPAKIGAGNLDLYRTHGVKSVFQGGEKHSLTGHSFVANANYSSTLGRDTTRVVSCNTTGTVRTLTALKNAGLLSKARGVLVRRATDPWESDHSGIMNTIVPEGNIPSHQGPDAQSVVPDLDVVTMAAKGAHTHNHLHFWTIELTRPADTEEVLEALKAMPRIAFVRRSDGIVAVNSTVELMRDLGRPRGDMYEVAIWEDILTVQGNELFLTYTVDNQAIVVPENIDAIRALASTVEDGDESIQRTDRALGVRADFVSPAPTS
SIO_010081: B840_RS12630
subclass of: SO_0000673
so part of: B840_RS12630
location: 57796..58848
location: region:57796-58848:1
so has part: feature:57796-58848:1:exon

WP_042622826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57796-58848:1:exon

B840_RS12635
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12635
old locus tag: B840_12975
so part of: sequence
location: complement(58960..59844)
location: region:58960-59844:-1
so has part: feature:58960-59844:-1:exon
subclass of: SO_0000010

position:58960:-1
position: 58960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59844:-1
position: 59844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58960-59844:-1:exon

B840_RS12635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12635
old locus tag: B840_12975
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010080265.1
GO function: GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: fructose bisphosphate aldolase
translation: MDVGKYDKVRAGTGFIAALDQSGGSTPKALKLYGINEDAYSSGEEMFALVHKMRTRIITSPSFDGDRILGAILFEDTMDRDIGGMPTGDYLWKVKDIVPFLKIDKGLAEETHGAQVMKPLPDLDNLLERAVSKHMFGTKMRSFIRLPGQGVDAVVAQQFAIAQQILRFGLVPIVEPEVDIHSPRKIEVEDQLRVTLRKELDQLKEDQAVILKLTLPETDDFYREFVEHRRVIRVLALSGGYSRAEANARLARNPGMIASFSRALTEGLTLTQDDGEFDAVLAETIGTIAEASRT
SIO_010081: B840_RS12635
subclass of: SO_0000673
so part of: B840_RS12635
location: complement(58960..59844)
location: region:58960-59844:-1
so has part: feature:58960-59844:-1:exon

WP_042622827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58960-59844:-1:exon

B840_RS12640
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12640
old locus tag: B840_12985
so part of: sequence
location: complement(60096..63242)
location: region:60096-63242:-1
so has part: feature:60096-63242:-1:exon
subclass of: SO_0000010

position:60096:-1
position: 60096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63242:-1
position: 63242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60096-63242:-1:exon

B840_RS12640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12640
old locus tag: B840_12985
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009356304.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-phosphoglucomutase family hydrolase
translation: MLFDMDGVVTRTTSVHAAAWKELFDSVLADSRSGVGADTPPFDADRDYRLYVDGRSREDGIRAFVTSRGIRLPTGSPGDGPDAWSVAGLGSRKNDLFLAALARDGVSVYPGAVALLERLRGGGIPVGLVTASRNAQALLEAAGLESAFDVIVDGLVAADQGLPSKPDPAMFLEAARRLGVSPERAVVIEDAVSGVKAGRGGGFGLVVGIDHAGYREQLEAAGADVVLGDVGQLDLGALRTDPWLLVYEGFDPAHEGHREALTALGNGYMATRGARPERRDDGIHYPGTYLSGVYNRTTGIIHGRELEEEHLVNIPNWLPVDVRIGDGPWWSTGEMEVSEDRSELDLRRGTLTRRATLTGPGNAQLIVVQRRLVSMDNPHLAALQTTVTAQGFSGTVGIRAGIDAQVTNTNVRDYIGSGQAHLTNAVVTDTDEDTVLCEVETNQSQIRIALAVRTEFPGREVTASDVNNGGGRYLRNCDVQLIDGETATMTKTAAIVTSRDAAISSPGEAALTELSHNAGDFDTLLHNHEAAWRRLWDRFGVTFDGDRQSRLILNLHVFHLLQAISEHTAELDAGVPARGLHGEGYRGHIFWDELFVLPVIGLRLPQVSQALLEYRWQRLDAARAAAWAQGLKGALFPWQSGSDGREETPQWLYNPRSARWMPDNSSRQRHVGLAIAYNAWQYFQATGDRDWLATRGAELIIEITRMFASLVTYDDSTGRHHLTGVMGPDEYHDGYPDHPGEGLTDNAYTNILLSWVCERATDALRELAGHQEHDLIDRLQITPDEIHHWSQLSSSLTVAFHADGIISQFDGYEDLLELDWARYRAKYGNIGRLDLILEAENDTTNRYKLAKQADVLMPIYLLGPAGVINQLGRLGYSFSDTDLKRTVEYYVSRSSEGSTLSRVVHSSVLSRFNEDRAWALFREALVADLDDTQGGTTREGIHLGAMAGTVDILTRSFAGLQTEANALTFAPRLPTHLGKVEFQIQYRGHLIDVALGIDSLLIRLHPSTAPPIYVGSAGAYVELAGGESTDLFEARRGLQNKSTPDLTR
SIO_010081: B840_RS12640
subclass of: SO_0000673
so part of: B840_RS12640
location: complement(60096..63242)
location: region:60096-63242:-1
so has part: feature:60096-63242:-1:exon

WP_229676669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60096-63242:-1:exon

B840_RS12645
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12645
old locus tag: B840_12990
so part of: sequence
location: complement(63319..65754)
location: region:63319-65754:-1
so has part: feature:63319-65754:-1:exon
subclass of: SO_0000010

position:63319:-1
position: 63319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65754:-1
position: 65754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63319-65754:-1:exon

B840_RS12645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12645
old locus tag: B840_12990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018296926.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoketolase family protein
translation: MINNTARTHSDGGVLTPTELTHLHAWWRAANYLSVGQIYLMDNPLLREPLQPEHIKPRLLGHWGTTPGLNFIYAHLNRSIIKRDLNMIYIMGPGHGGPGPVAAGWLEGTYSETYPDVGQDLEGMKQLFKQFSFPGGIPSHVAPETPGSIHEGGELGYALSHAYGAAFDNPDLIVAAVVGDGEAETGPLAASWHSNKFMNPARDGAVLPILHLNGYKIASPTVLARIDHDELDDLLRGYGHTPYYVEGHDPEQMHQDFARALDTCLDDIREIQHRARESGETERPRWPMIVLRSPKGWTGPAEVDGQDVEGSWRSHQVPFSAARENDSHRKILEDWLRSYRPEELFDDSGEPVEEVRILHPPGDRRMSANPHANGGTLLRDLRIPDFRDYAVPVEQPGTGQVEATRVLGQMLRDILATNLHNFRVFAPDENNSNRLTAVLEATDRAWNVGTVPGDDHLARDGRVMEILSEHTCQGWLEGYLLTGRHGFFSCYEAFIHIVDSMFNQHAKWLDTTNGIPWRRPIASLNYLVTSHVWRQDHNGFSHQDPGFIDHVLNKKPEVIRVYLPPDANTLLSVADHCLRSRQYVNVIVAGKQPQLQYLDMDDAIVHCTKGIGIWDWASTHPDTEPDVVLGCAGDVPTMETLAAVDLLRSHFPDLSIRVVNVVDLLRLQHESEGPHGLSDTDFDALFTTDKPVIFAYHGYPWLIHRLTYRRTNHGNFHVHGFREEGTTTTPFDMCVLNRIDRFHLAMAVIDRVPRLKDVSATVREKFKNALIEHHQYIRTHGEDMPEISNWQWSAVPGPGLRCEQEAREEPV
SIO_010081: B840_RS12645
subclass of: SO_0000673
so part of: B840_RS12645
location: complement(63319..65754)
location: region:63319-65754:-1
so has part: feature:63319-65754:-1:exon

WP_042622829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63319-65754:-1:exon

B840_RS12650
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12650
old locus tag: B840_12995
so part of: sequence
location: complement(65937..66347)
location: region:65937-66347:-1
so has part: feature:65937-66347:-1:exon
subclass of: SO_0000010

position:65937:-1
position: 65937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66347:-1
position: 66347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65937-66347:-1:exon

B840_RS12650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12650
old locus tag: B840_12995
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018296927.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: four-helix bundle copper-binding protein
translation: MTHHVRAMLETHPKDLGQIDKDKLAECITACFECAQTCTACADACLGEDMVAELTTCIRLNLDCADICTATGRMLSRPTDWNVTLIRSVLEACRTACQACGEECARHAEMHEHCTVCAEACRRCEQACTELLATLD
SIO_010081: B840_RS12650
subclass of: SO_0000673
so part of: B840_RS12650
location: complement(65937..66347)
location: region:65937-66347:-1
so has part: feature:65937-66347:-1:exon

WP_042622855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65937-66347:-1:exon

B840_RS12655
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12655
old locus tag: B840_13000
so part of: sequence
location: 66718..67326
location: region:66718-67326:1
so has part: feature:66718-67326:1:exon
subclass of: SO_0000010

position:66718:1
position: 66718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67326:1
position: 67326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66718-67326:1:exon

B840_RS12655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12655
old locus tag: B840_13000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006284591.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdhK family protein
translation: MKRTIALAALALTSSLALAACTDDTASDAPETTTTTTSETATQSSEETGMNDQMGAEGHDHPADGGQPPAGIAAEENPTYPVDTEVVLTADHMPGMEGAEATIAGAFDTTTYSVSYTPTDGGDPVTDHRWVVHEELVDPGQAPLPEGSEVVLDAEHMSGMKGVEATIDYSTDETVYMVDLTVDGMTMTNHKWVTESEIAPAE
SIO_010081: B840_RS12655
subclass of: SO_0000673
so part of: B840_RS12655
location: 66718..67326
location: region:66718-67326:1
so has part: feature:66718-67326:1:exon

WP_042622830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66718-67326:1:exon

B840_RS12660
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12660
old locus tag: B840_13005
so part of: sequence
location: complement(67749..68300)
location: region:67749-68300:-1
so has part: feature:67749-68300:-1:exon
subclass of: SO_0000010

position:67749:-1
position: 67749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68300:-1
position: 68300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67749-68300:-1:exon

B840_RS12660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12660
old locus tag: B840_13005
inference: COORDINATES: protein motif:HMM:NF024880.2
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0032259 - methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MIPWATQDCSLAGRVLEIGGGSGAMAEAIIHSHGQVNLTTTDVDPAMVQAAQRSLAGLPIEARQADATALPFADESFDMVVSFLMLHHVVEWEQAVAEVARVLRPGGLFVGYDLLSSRVAGWLHRVDGSPHRLIEADAFESALEQAGLDPLRLRSTGGGLVLRFVVHKSSITDHNPSNSGHGT
SIO_010081: B840_RS12660
subclass of: SO_0000673
so part of: B840_RS12660
location: complement(67749..68300)
location: region:67749-68300:-1
so has part: feature:67749-68300:-1:exon

WP_268236900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67749-68300:-1:exon

B840_RS13355
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13355
so part of: sequence
location: 68460..68849
location: region:68460-68849:1
so has part: feature:68460-68849:1:exon
subclass of: SO_0000010

position:68460:1
position: 68460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68849:1
position: 68849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68460-68849:1:exon

B840_RS13355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13355
inference: COORDINATES: protein motif:HMM:NF014643.2
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MPPCRRCYPAQQSVSPREPTFHLLGVGRVRHGEEAVRSLLGELRRDLGEVVNRVRFAGERAAVTRHSKTVAAMVSVEDLELLDELELLDELELLDELEPSADLEALRQARREDDGARIFLEVFLSGQAF
SIO_010081: B840_RS13355
subclass of: SO_0000673
so part of: B840_RS13355
location: 68460..68849
location: region:68460-68849:1
so has part: feature:68460-68849:1:exon

WP_084603127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68460-68849:1:exon

B840_RS13645
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13645
so part of: sequence
location: complement(69100..69396)
location: region:69100-69396:-1
so has part: feature:69100-69396:-1:exon
subclass of: SO_0000010

position:69100:-1
position: 69100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69396:-1
position: 69396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69100-69396:-1:exon

B840_RS13645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13645
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIAHGGELPVGLVGEHYCCEPLCVRVGEGHLRLTTQAINLARAVALGRHSSNHEVVASFDRAARSFRVRDAVLDGWNEQALRAAQGGLPAAEDQPGLW
SIO_010081: B840_RS13645
subclass of: SO_0000673
so part of: B840_RS13645
location: complement(69100..69396)
location: region:69100-69396:-1
so has part: feature:69100-69396:-1:exon

WP_052491233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69100-69396:-1:exon

B840_RS13000
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13000
old locus tag: B840_13020
so part of: sequence
location: complement(69680..70132)
location: region:69680-70132:-1
so has part: feature:69680-70132:-1:exon
subclass of: SO_0000010

position:69680:-1
position: 69680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70132:-1
position: 70132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69680-70132:-1:exon

B840_RS13000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13000
old locus tag: B840_13020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVARKGTLNARQRARLAVQADQDKIKRQVDLFTEALTAVDARDQAEIRLGQALNELRGMGLSRADIADRSGLTPREISAAMRAATDAETLDEEAVVEVGEGDVEVTSDGGADGSHDGHVSAHGGDDLDITGDADSDPEAAHAGDRAHAQ
SIO_010081: B840_RS13000
subclass of: SO_0000673
so part of: B840_RS13000
location: complement(69680..70132)
location: region:69680-70132:-1
so has part: feature:69680-70132:-1:exon

WP_156971987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69680-70132:-1:exon

B840_RS12680
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
gene: mobF
locus tag: B840_RS12680
old locus tag: B840_13025
so part of: sequence
location: 70400..74413
location: region:70400-74413:1
so has part: feature:70400-74413:1:exon
subclass of: SO_0000010

position:70400:1
position: 70400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74413:1
position: 74413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70400-74413:1:exon

B840_RS12680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
gene: mobF
locus tag: B840_RS12680
old locus tag: B840_13025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015402291.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MMSVRVVNAGDGYAYLLDSVAAHDDTGSAGTSLSDYYQATGTPPGRWFGKGIGGLGATTIGSGVAVGEAQMAALYGEGLHPDADHKMLHEGASLKDVQLGRRFPIYTKGVPVLEAVKAAEAEFLTARGRRPSTEERNIIGLEIARPHYETAQGLTTSSPREVLAWLNDEKNNVKQATSGVDLTFSPQKSVSVLWALGDDATRQAIEEIHQETVTDCLSWIEDHVLFTRTGHRGERQIRARGMIAATFVHFDTRAGDPDLHTHCLISNKVQADPTTPGMTKAEADKWRSIDASHLLKNSALVGQRYQQLLNQRLTQRLGLEFRPRVTVDEKAPVWEVAGIDDGLIEHFSSRRTMARPVYERYAAEYAATHGHAPSDRVRYGLWQQAILDTRDAKKPAQSLEDHRAQWATMAGGQHLSAARLAKQASAREMFPPAGTTAYEEAVAHLAHQATEDTRTRRAEFYQRHLTTSVTMRMNQWRFPDEDTAEQVRHDTVRFAREHLIVALTPPADQILPAALLHADGRAIDQDHDAEMLTATATLAEESIVLDAVGEPTAHIATRTSVTQALSEHATTSGFELNEGQKLLVSHLTESGAQLTAGVGPAGTGKTASMAVVARIWQDQGHQVIALAPSATAAQQLGHDINTPAHTLASLTYRWRGMVGDHPRSLDHLGITLKPGDMLLLDEAGMATTADLAALVEIAQASGAVVRMVGDPHQLDAVETGGLFRTLVKRDQSVELDQVMRMGADTAQATAGLAIRHGDATGLKLYHSRGWVHHGARSDMVTAAAHAHLADEAEGHTGILIASTRADVDAANQIIRDARCQRGLIDTDGPQITLGTGHQAARGDVILTRRNQTIGGQRVLNGHRFTITHIRQDGSLEVTSQERRRPLILPAQYVAEHVQLGYAATVHRAQGVTVDITRAIVGPETDRRGLYVALTRGKKQNHIYVAEDTRIDLDSEDAHWHMSGEHHALDHHDILARIVATDDGHRSAHDLHRAELAHATSPERKRELLATATDVLTTSWRRTQLEPEVRDLLDALPVTLTAPVDEDQAVERIATTAVRLARHRIDYRDLIGEATANLEGSRDVAAVIAHRLESHLPASAPKLAALPPRHIGQDVELYDWATTTRDELARDTARTLRPLNAPLPERGEIHGQDLSNTDLRGMQLTGVKFIDCDLRGAAFDDTDFHQVSFTSCQMQNTSFTSARFGVGDGPFRVIPLLDCDLSGANFTDAQLVRTRFTTCSLTDARFTGAQIAGRFQYVDLTGADFTDAHASTHLSVADCVLDENAPEALHEAQGETVADRERARQNRMRNDHAAQETYAAPTQHQQQVVDHTQGGLEL
SIO_010081: B840_RS12680
subclass of: SO_0000673
so part of: B840_RS12680
location: 70400..74413
location: region:70400-74413:1
so has part: feature:70400-74413:1:exon

WP_084603129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70400-74413:1:exon

B840_RS12685
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12685
old locus tag: B840_13030
so part of: sequence
location: 74607..75194
location: region:74607-75194:1
so has part: feature:74607-75194:1:exon
subclass of: SO_0000010

position:74607:1
position: 74607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75194:1
position: 75194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74607-75194:1:exon

B840_RS12685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12685
old locus tag: B840_13030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018023047.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIIGIVNGKGGVGKTTTAIYLAKSFTDKGHKVAVIDLDLQGSASDWADRAEAAGTPLPFPVEVSNLKRLPRTISAVGQDAIVILDTPPGDARSIDAAIEASDFIIVPTQASSIEVARVWETLPSLNGLPFGVLITSARLGTRNLEAVAEVLKGQEVPVFDARIPLRETIRDTFGTVPTKSEGYEKVAQEILEAFQ
SIO_010081: B840_RS12685
subclass of: SO_0000673
so part of: B840_RS12685
location: 74607..75194
location: region:74607-75194:1
so has part: feature:74607-75194:1:exon

WP_042622832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74607-75194:1:exon

B840_RS12690
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12690
old locus tag: B840_13035
so part of: sequence
location: 75191..75421
location: region:75191-75421:1
so has part: feature:75191-75421:1:exon
subclass of: SO_0000010

position:75191:1
position: 75191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75421:1
position: 75421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75191-75421:1:exon

B840_RS12690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12690
old locus tag: B840_13035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006770466.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDKKSKFQPPAATKPAARRSMQEAFHDGEEPTTMFTLRMNSDLHRRLKLRAVTEGRPMKEILEDLLRTYLDENKS
SIO_010081: B840_RS12690
subclass of: SO_0000673
so part of: B840_RS12690
location: 75191..75421
location: region:75191-75421:1
so has part: feature:75191-75421:1:exon

WP_042622833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75191-75421:1:exon

B840_RS13995
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13995
old locus tag: B840_13040
so part of: sequence
location: 75531..75659
location: region:75531-75659:1
so has part: feature:75531-75659:1:exon
subclass of: SO_0000010

position:75531:1
position: 75531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75659:1
position: 75659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75531-75659:1:exon

B840_RS13995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13995
old locus tag: B840_13040
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTLRMNSDLHRRLKLRAVTEGRPMKEILEDLLRTYLDENKS
SIO_010081: B840_RS13995
subclass of: SO_0000673
so part of: B840_RS13995
location: 75531..75659
location: region:75531-75659:1
so has part: feature:75531-75659:1:exon

WP_268236899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75531-75659:1:exon

B840_RS12695
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12695
old locus tag: B840_13045
so part of: sequence
location: 76055..76990
location: region:76055-76990:1
so has part: feature:76055-76990:1:exon
subclass of: SO_0000010

position:76055:1
position: 76055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76990:1
position: 76990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76055-76990:1:exon

B840_RS12695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12695
old locus tag: B840_13045
inference: COORDINATES: protein motif:HMM:NF016670.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication protein RepA
translation: MENYTPARVGEGKYADAPALLDAEAVDQQDIGYTSRIFVQALFPYRRTDDLIRQVQNGPNRITVTSPDGLPYGKYPRLIMAYIITQAVHRQDLPEDEARRIPLGRSMNAFLEQIGLMSRGTGGQRGTVTLIREQLRRITSSSIKVEKIFRTQERDRGRGKSIDITDEYDLWYDAENPDQTTVTESYIELTREFYQQTIEAPIPIDLEVLKQLGKPRAIDIYVWLALKKYWLSKSSHRDFTFTWDTLALHFSPKELTTRYERSDFRKEVRKCIASIEELWPEVGAEVTDEGLLLHRGDPPVRPKPSRRELHR
SIO_010081: B840_RS12695
subclass of: SO_0000673
so part of: B840_RS12695
location: 76055..76990
location: region:76055-76990:1
so has part: feature:76055-76990:1:exon

WP_052491236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76055-76990:1:exon

B840_RS12705
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
gene: istB
locus tag: B840_RS12705
old locus tag: B840_13055
so part of: sequence
location: complement(77863..78597)
location: region:77863-78597:-1
so has part: feature:77863-78597:-1:exon
subclass of: SO_0000010

position:77863:-1
position: 77863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78597:-1
position: 78597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77863-78597:-1:exon

B840_RS12705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
gene: istB
locus tag: B840_RS12705
old locus tag: B840_13055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014010414.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MTEPITAVDIITAGKATSLTAAVLAEWAEKGTPKQREYLHGLLIAEQHSRHTARSTRLLRAAKLPMIKTLDGDDWSNIGFPDGYGRDQLRCLDFLDTGGDLVFYGDVGTGKTHLACALVAQACQAGIPARFFTTASLVAHLRRAKEADRLDKELASLAKNRLLVIDEFGYLPIDTEGARLLFQVIADAYEKRSLILTTNLAFSKWGAVFGDDHMAAAVIDRIVHHGRLLHFTGESYRVKHALMT
SIO_010081: B840_RS12705
subclass of: SO_0000673
so part of: B840_RS12705
location: complement(77863..78597)
location: region:77863-78597:-1
so has part: feature:77863-78597:-1:exon

WP_211255114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77863-78597:-1:exon

B840_RS12710
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
gene: istA
locus tag: B840_RS12710
old locus tag: B840_13060
pseudo: true
so part of: sequence
location: complement(78594..80064)
location: region:78594-80064:-1
so has part: feature:78594-80064:-1:exon
subclass of: SO_0000010

position:78594:-1
position: 78594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80064:-1
position: 80064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78594-80064:-1:exon

B840_RS12710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
gene: istA
locus tag: B840_RS12710
old locus tag: B840_13060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013348175.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS21 family transposase
SIO_010081: B840_RS12710
subclass of: SO_0000673
so part of: B840_RS12710
location: complement(78594..80064)
location: region:78594-80064:-1
so has part: feature:78594-80064:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78594-80064:-1:exon

B840_RS12715
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12715
old locus tag: B840_13065
so part of: sequence
location: 80579..80914
location: region:80579-80914:1
so has part: feature:80579-80914:1:exon
subclass of: SO_0000010

position:80579:1
position: 80579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80914:1
position: 80914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80579-80914:1:exon

B840_RS12715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12715
old locus tag: B840_13065
inference: COORDINATES: protein motif:HMM:NF013677.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MPKNTYTDEFRADAVRLYEDTEGASFTSIAEDLGIGRATLKNWVYAARKSRGIQPTSTAEDPADELLRLRKEVQHLRSETQKLSTERDILRKAAKYFAAEAGAGWSLWFMR
SIO_010081: B840_RS12715
subclass of: SO_0000673
so part of: B840_RS12715
location: 80579..80914
location: region:80579-80914:1
so has part: feature:80579-80914:1:exon

WP_042622836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80579-80914:1:exon

B840_RS12720
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12720
old locus tag: B840_13070
so part of: sequence
location: complement(81615..83495)
location: region:81615-83495:-1
so has part: feature:81615-83495:-1:exon
subclass of: SO_0000010

position:81615:-1
position: 81615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83495:-1
position: 83495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81615-83495:-1:exon

B840_RS12720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12720
old locus tag: B840_13070
EC number: 7.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011015537.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal translocating P-type ATPase
translation: MKTWKTWGVVAVSGLLIILSWLTPAGWLSDGFMIAAAVVAGWQIAVSAVQALRIRMISIDLLVIVAAIGALFINNYWESAAVTFLFALGKALEKATMNRTRKALSDLVDAAPETATVLRDGEPETVEIWELAPGDVVLVKNGEQIPVDGRVLSGHGGVDEATITGESVPAEKAEDSEVFAGTWLRSGVLRIEAIGIGSDSTLAKIIHRVEDAQDDKAKTQTFLEKFSKYYTPGVMVAALAVGLITLNVELALTLLVIACPGALVISIPVSIVAGIGRSAKDGVLIKGGEYLETSAKVDTVVVDKTGTLTNGRPELTNVDVLDPAYSDDEVLTLAARAETASEHPLAEAIIRGAENKGLTIEMVEKAKPVTGKGIIAKVDDHTVAVGSADLLDHAPDTTRILELNDQGKTAMYVGVDGRAIGIVAVADTIRDDAPAAIRSLHDKGVRVIMATGDAQRVARNVAAELGVDEVRAELMPEDKLTIVKDLQAQGRTVAMIGDGVNDTPALAQADIGIAMGAAGSPAAIETADIALMADKLPRLPYALGLAQRTVRTMRINIAIALATVAILLAGVLLGGVTMSIGMLVHEASVLLVIAIAMLLLRPTLKQEDRDKADVSTADAAKETLSA
SIO_010081: B840_RS12720
subclass of: SO_0000673
so part of: B840_RS12720
location: complement(81615..83495)
location: region:81615-83495:-1
so has part: feature:81615-83495:-1:exon

WP_042622837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81615-83495:-1:exon

B840_RS14000
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS14000
so part of: sequence
location: 83800..83928
location: region:83800-83928:1
so has part: feature:83800-83928:1:exon
subclass of: SO_0000010

position:83800:1
position: 83800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83928:1
position: 83928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83800-83928:1:exon

B840_RS14000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS14000
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAQPFPDRVAAVWVGRRKGGEQGEVVIYASLVGVTGLLEMS
SIO_010081: B840_RS14000
subclass of: SO_0000673
so part of: B840_RS14000
location: 83800..83928
location: region:83800-83928:1
so has part: feature:83800-83928:1:exon

WP_255312486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83800-83928:1:exon

B840_RS12725
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12725
old locus tag: B840_13075
so part of: sequence
location: complement(84138..84455)
location: region:84138-84455:-1
so has part: feature:84138-84455:-1:exon
subclass of: SO_0000010

position:84138:-1
position: 84138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84455:-1
position: 84455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84138-84455:-1:exon

B840_RS12725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12725
old locus tag: B840_13075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011015536.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEVTFASLHEKMNFLLKDHGVENFDESDLDLESVSSLHAKANALCAAHGGDPSRMANDTLAQLHPKLDFLMKGHGVDTDTARLNLSTLEAVNAKVNAIVNAHDH
SIO_010081: B840_RS12725
subclass of: SO_0000673
so part of: B840_RS12725
location: complement(84138..84455)
location: region:84138-84455:-1
so has part: feature:84138-84455:-1:exon

WP_042622838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84138-84455:-1:exon

B840_RS12730
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12730
old locus tag: B840_13080
so part of: sequence
location: complement(84661..84897)
location: region:84661-84897:-1
so has part: feature:84661-84897:-1:exon
subclass of: SO_0000010

position:84661:-1
position: 84661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84897:-1
position: 84897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84661-84897:-1:exon

B840_RS12730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12730
old locus tag: B840_13080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003859529.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy-metal-associated domain-containing protein
translation: MTAPATLKNTTLRSDEFTCPSCVAKIENKLNGLDGVENAEVKFSSGRILVTHDPQKVSVRDLVTAVAEVGYTAKPSAI
SIO_010081: B840_RS12730
subclass of: SO_0000673
so part of: B840_RS12730
location: complement(84661..84897)
location: region:84661-84897:-1
so has part: feature:84661-84897:-1:exon

WP_042622839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84661-84897:-1:exon

B840_RS12735
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12735
old locus tag: B840_13085
so part of: sequence
location: complement(85053..85793)
location: region:85053-85793:-1
so has part: feature:85053-85793:-1:exon
subclass of: SO_0000010

position:85053:-1
position: 85053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85793:-1
position: 85793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85053-85793:-1:exon

B840_RS12735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12735
old locus tag: B840_13085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003862064.1
GO function: GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Crp/Fnr family transcriptional regulator
translation: MARNPVRHNCAQPHQCSLDVRMQVMARSPLTKELGPQQHRELDQHLTSWAWAAGDPILLAGEQTQGSYMVASGRARITRDTIDGREITVDIAAPGDVIGPLHTHSSPATDSAWAIETTCALYLPAEALAEVVDAYPQLALAIMRMQQDQLARSRERETAQATSTVEQRVAAALQHLDAKLGQIRQDGSSLLQVRLRRNDVAGMAGTTVESASRAMARMKKTGVIDSGREWIAITNHQALADLVAGL
SIO_010081: B840_RS12735
subclass of: SO_0000673
so part of: B840_RS12735
location: complement(85053..85793)
location: region:85053-85793:-1
so has part: feature:85053-85793:-1:exon

WP_188656969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:85053-85793:-1:exon

B840_RS13735
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS13735
old locus tag: B840_13090
so part of: sequence
location: 86382..86978
location: region:86382-86978:1
so has part: feature:86382-86978:1:exon
subclass of: SO_0000010

position:86382:1
position: 86382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86978:1
position: 86978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86382-86978:1:exon

B840_RS13735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS13735
old locus tag: B840_13090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015650324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CueP family metal-binding protein
translation: MNRFAALLAVCALTLAGCTTSAADPEEAEFLASVDLAGMDAVGIIDYLDALLVEARPQDLMAVVRPDELVLTTPDEEISLDMPAASVYVSVAPFINQTHDCFYHSLTTCLGELRNAPVEVEIIEDGTGAVLVSEQATTFDNGFIGYWLPRDTAGTIEITHGEFTGYSYFTTGTDGATGTDGATCITDLRLRASPLPQV
SIO_010081: B840_RS13735
subclass of: SO_0000673
so part of: B840_RS13735
location: 86382..86978
location: region:86382-86978:1
so has part: feature:86382-86978:1:exon

WP_042622840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86382-86978:1:exon

B840_RS12745
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12745
old locus tag: B840_13095
so part of: sequence
location: 87350..88270
location: region:87350-88270:1
so has part: feature:87350-88270:1:exon
subclass of: SO_0000010

position:87350:1
position: 87350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88270:1
position: 88270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87350-88270:1:exon

B840_RS12745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12745
old locus tag: B840_13095
EC number: 1.-.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011015533.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADP-dependent oxidoreductase
translation: MSKVYVFNEYGGPDNQELITRNTPQPGPGELGVKVHAAGVNPLDWKVRSGVAGTPRELPAPLGEEASGIVTAVGDGVEGFAVGDQVLGLVVPGVGGYAEDTLLVAESTVLKPEEISFTDAAAIPVAGASAYAGTHQVELEPGQSLLINGAGGGVGLMAAQIGRVHKFQVVGVDHEDKRELIESTGAIFVATGDAVAEQVRALLPDGVDLVFDLVGGEALRVVAPLAKNPAHVISAADAATVGELGGQVLRRTPEMVGQITGVVQYGLVDPKVDTTYPLEQAGKALAHVEQGHARGKIVLELITSQD
SIO_010081: B840_RS12745
subclass of: SO_0000673
so part of: B840_RS12745
location: 87350..88270
location: region:87350-88270:1
so has part: feature:87350-88270:1:exon

WP_042622841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87350-88270:1:exon

B840_RS12750
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12750
old locus tag: B840_13100
so part of: sequence
location: 88688..89488
location: region:88688-89488:1
so has part: feature:88688-89488:1:exon
subclass of: SO_0000010

position:88688:1
position: 88688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89488:1
position: 89488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88688-89488:1:exon

B840_RS12750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12750
old locus tag: B840_13100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019158404.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLFGQALGLGTLGLVAGVIGAVIAALATRSQTSTLTSYVQHFAAGLIIAAATLDLLPEALHLGGGWPLIVGFVLGTAFMLALRSLLTRVGHSHHPGDDPHHDHHGHDDAHGHDAHSPTTATGVNLRLIVALAVVVLIDGAIIGVALSAGGAAALLIAIALSIELLFVAASTAGSTRAGGGSLGTAIGVGTFVAAMMPIGAVLGALVFAGVSAPVLVAGLAFGAAALLFTAVAELLVEAYEIKESTGTIAMAAAGFLVFLLLMMLM
SIO_010081: B840_RS12750
subclass of: SO_0000673
so part of: B840_RS12750
location: 88688..89488
location: region:88688-89488:1
so has part: feature:88688-89488:1:exon

WP_042622862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88688-89488:1:exon

B840_RS12755
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12755
old locus tag: B840_13105
so part of: sequence
location: complement(89584..89859)
location: region:89584-89859:-1
so has part: feature:89584-89859:-1:exon
subclass of: SO_0000010

position:89584:-1
position: 89584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89859:-1
position: 89859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89584-89859:-1:exon

B840_RS12755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12755
old locus tag: B840_13105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003859519.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSASDIVSCRFKVEGVRTDRDVKKALQSLYDIFADHGLGQAAFEITGDEHADLIIKHLASVDPDPAIIDAALARAGDFRVISADLHSDHSG
SIO_010081: B840_RS12755
subclass of: SO_0000673
so part of: B840_RS12755
location: complement(89584..89859)
location: region:89584-89859:-1
so has part: feature:89584-89859:-1:exon

WP_042622842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89584-89859:-1:exon

B840_RS12760
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12760
old locus tag: B840_13110
so part of: sequence
location: complement(89867..91390)
location: region:89867-91390:-1
so has part: feature:89867-91390:-1:exon
subclass of: SO_0000010

position:89867:-1
position: 89867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91390:-1
position: 91390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89867-91390:-1:exon

B840_RS12760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12760
old locus tag: B840_13110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018120907.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molybdopterin-dependent oxidoreductase
translation: MEVNPDFPLWLRATHLINFVLIGMLLRSGWEILSSMPRLWWRNDCAPGTEWLRFTRRKLPKEEGVYTSLMDEKSLSPLIALPGRENIGLGRHWHGLSVMLWVLNGLVYVVLLFATGLWQRIIPTSWDVFPEAWETLKVYLGFRAPGIEHFTPYDSLQMLGYTFVIFILAPFLILTGLAMAPAIRSRYPWYVKAFGGHQGARSLHFIAMVLMAGFVVMHVGLVFLVHGDYNMVHMVFGDMDTTRAAQAYIIVIATIVVVILFWIVLSYWSLADRARSQRITAGVTEIGRKLFLNWMRPRMSEQKVYTDKDISQFHWTNGLPPTDDDSPEWIAARDNGWEGYTITIGDDLAGTEKVVTLDDLKALPQVSYVAVHTCMQGWSATSRWTGVRLRDLMELIGPKPDEARYVLIDSYGLAQKMYDNRPREPFYAVLDLETTYEDDTIVAYERNGKPLETHLGAPARLRAESNHGYKMVKWINSIRWIKDYADYGDGRGGTREDSALQAFNGRI
SIO_010081: B840_RS12760
subclass of: SO_0000673
so part of: B840_RS12760
location: complement(89867..91390)
location: region:89867-91390:-1
so has part: feature:89867-91390:-1:exon

WP_042622843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89867-91390:-1:exon

B840_RS12765
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12765
old locus tag: B840_13115
so part of: sequence
location: 91704..92309
location: region:91704-92309:1
so has part: feature:91704-92309:1:exon
subclass of: SO_0000010

position:91704:1
position: 91704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92309:1
position: 92309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91704-92309:1:exon

B840_RS12765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12765
old locus tag: B840_13115
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019158405.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MATDDLSQAYNSPNFDPEALLGTIISADDPDRALIESWAANVDGAILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHLGPDELPAALAALRAVAKDDGILLMSFFSGPRLEPLHHPVATAYQWPLPDLARALEDAGFQVTSSHWDPRFPHAYLTAEASKQNLA
SIO_010081: B840_RS12765
subclass of: SO_0000673
so part of: B840_RS12765
location: 91704..92309
location: region:91704-92309:1
so has part: feature:91704-92309:1:exon

WP_229676671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91704-92309:1:exon

B840_RS12770
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12770
old locus tag: B840_13120
so part of: sequence
location: complement(92550..93272)
location: region:92550-93272:-1
so has part: feature:92550-93272:-1:exon
subclass of: SO_0000010

position:92550:-1
position: 92550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93272:-1
position: 93272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92550-93272:-1:exon

B840_RS12770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12770
old locus tag: B840_13120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011015522.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VIT family protein
translation: MIISTNTAHPLHEPHVPSHHNRMNTLRAGVLGANDGIVSIAALLLGVIATGASDTVVFGAGLASTIAGAVSMALGEYVSVSSQRDTERVLIAKEAKELAEDPTAEHVELSEILHSYGISPATANQAATEIGQGDALGAHLQLELGIDNEQLTSPLAAAFSSAVAFLLGALLPMVSVFIAPAGWDAGVVFVVTLLVLAVTGFISAQISGTSPMRACGRLVIGGALGLALTYGVGVLFGAAV
SIO_010081: B840_RS12770
subclass of: SO_0000673
so part of: B840_RS12770
location: complement(92550..93272)
location: region:92550-93272:-1
so has part: feature:92550-93272:-1:exon

WP_003859513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92550-93272:-1:exon

B840_RS12775
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12775
old locus tag: B840_13130
so part of: sequence
location: 93745..94443
location: region:93745-94443:1
so has part: feature:93745-94443:1:exon
subclass of: SO_0000010

position:93745:1
position: 93745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94443:1
position: 94443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93745-94443:1:exon

B840_RS12775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12775
old locus tag: B840_13130
inference: COORDINATES: protein motif:HMM:NF012870.2
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MDDWAQIRCLRKQGLSIRKIAAEVGCAKKTVERALASPEPPTYKKRAGKATSFTPFEPQVRALLEKTPTLPATVIAERVGWTGSITWFRDNIRRIRPDYQPVDPVDTLTHRPGEQIQCDLTFPTGGLPDETGTRAEFPVLVMVASHSRFMAARVLPTRTTGDLIAGMWALLSTSFQAVPEHLLWDHETGIGQKKLTGPVLAFAGTLGTRILQAPPRDPETKPGSADGLSVIG
SIO_010081: B840_RS12775
subclass of: SO_0000673
so part of: B840_RS12775
location: 93745..94443
location: region:93745-94443:1
so has part: feature:93745-94443:1:exon

WP_169745292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93745-94443:1:exon

B840_RS12780
type: Gene
subclass of: SO_0000704
RO_0002162: 1224162
locus tag: B840_RS12780
old locus tag: B840_13135
so part of: sequence
location: complement(94562..95974)
location: region:94562-95974:-1
so has part: feature:94562-95974:-1:exon
subclass of: SO_0000010

position:94562:-1
position: 94562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95974:-1
position: 95974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94562-95974:-1:exon

B840_RS12780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1224162
locus tag: B840_RS12780
old locus tag: B840_13135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011069213.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1380-like element ISCli1 family transposase
translation: MQLSHTPAALSISFDDPNLVSAAGLVPAMRLADTAGLSTLAQHRMSIAGDKGANAGAKISSLVAGMVAGADSIDDMDLLRHGGMNRLFTRIYAPSTLGSFLRAFTFGHVRQLDAVASRFLINLADQSPGLVPAPPAATSGYVFVDVDDTIIEVHGHQKQGAGFGYSGVRGLNALLATVTTTESAPVVVAQRLRRGSCGSARGAGRLIADAITTTRRLPAMAQQKILVRADSAFYGRPSIHAALTAGADVSITARMTPNIQNAIATIPDTSWETIEYTDALFDEDTQTWISSAEVAEVPFIAFASKKAADQVPGRLVVRRIPELNKKNIDQPGLFDLHRFHAVFTTADPDLLGTVAADKTHRQHAVIEQVNADLKNSALAHMPSGVFTANAAWLVVAVMAFNLTRAAGTIAAGALARATTATIRRRIVMVAARIARRARRLVLHLPQGWKWEPQWRKLFEHGHSPPAVVSS
SIO_010081: B840_RS12780
subclass of: SO_0000673
so part of: B840_RS12780
location: complement(94562..95974)
location: region:94562-95974:-1
so has part: feature:94562-95974:-1:exon

WP_018297647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94562-95974:-1:exon