Cercospora beticola strain 09-40 chromosome 5, whole genome shotgun sequence.
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; Cercospora.
The cercosporin biosynthetic gene cluster was horizontally transferred to several fungal lineages and shown to be expanded in Cercospora beticola based on microsynteny with recipient genomes
Submitted (18-JAN-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (02-OCT-2015) Plant Systems Biology, VIB, Technologiepark 927, Ghent, Oost-Vlaanderen 9000, Belgium
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM008503.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: MAY-2014\nAssembly Method :: SOAPdenovo v. 2.04\nAssembly Name :: CB0940_V2\nExpected Final Version :: yes\nGenome Coverage :: 70.0x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
USA: Red River Valley of North Dakota and Minnesota
Tuberculostearic acid methyltransferase UfaA1
4-hydroxy-tetrahydrodipicolinate synthase
putative aldehyde dehydrogenase-like protein
Serine/threonine-protein phosphatase PP2A catalytic subunit
putative tRNA-splicing endonuclease subunit tsp-4
Mannan polymerase II complex ANP1 subunit
Heterokaryon incompatibility protein 6, OR allele
Serine/threonine-protein phosphatase ppe1
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
putative zinc-type alcohol dehydrogenase-like protein AdhB
putative serine/threonine-protein kinase GCN2
37S ribosomal protein S19, mitochondrial
Double-strand break repair protein mus-23
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
putative transcriptional regulatory protein
Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
Cyclohexane-1-carbonyl-CoA dehydrogenase
putative sterigmatocystin biosynthesis peroxidase stcC
Transcription initiation factor TFIID subunit 10
Conidial yellow pigment biosynthesis polyketide synthase
Serine/threonine-protein phosphatase 4 catalytic subunit B
putative glutamine amidotransferase-like protein
Dual specificity protein phosphatase PPS1
Ubiquitin carboxyl-terminal hydrolase isozyme L3
Guanine nucleotide-binding protein negative regulator 1
10 kDa heat shock protein, mitochondrial
Retrovirus-related Pol polyprotein from transposon TNT 1-94
putative mannosyl-oligosaccharide alpha-1,2-mannosidase 1B
RGS domain-containing serine/threonine-protein kinase A
NAD-dependent protein deacylase sirtuin-5, mitochondrial
Transport protein particle subunit trs85-2
CCA tRNA nucleotidyltransferase, mitochondrial
overlaps another CDS with the same product name
Mitochondrial import receptor subunit tom20
Zinc-type alcohol dehydrogenase-like protein
Nitrogen assimilation transcription factor nit-4
putative V-type proton ATPase 20 kDa proteolipid subunit
Transcription initiation factor IIA subunit 2
mRNA cleavage and polyadenylation factor CLP1
External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial
Succinate-semialdehyde dehydrogenase [NADP(+)]
putative mitochondrial carrier protein PET8
Pentatricopeptide repeat-containing protein 5, mitochondrial
Vacuolar protein sorting-associated protein 11
NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial
26S proteasome non-ATPase regulatory subunit 2
Peptidyl-prolyl cis-trans isomerase-like 3
Altered inheritance of mitochondria protein 9, mitochondrial
putative ubiquitin-conjugating enzyme protein 17
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
putative glutamine amidotransferase DUG3
putative aspartic-type endopeptidase opsB
DNA-directed RNA polymerase III subunit rpc5
DNA-directed RNA polymerase, mitochondrial
Glycerophosphodiester phosphodiesterase GDE1
Xylanolytic transcriptional activator xlnR
Dihydrosphingosine 1-phosphate phosphatase
Translation initiation factor eIF-2B subunit alpha
Succinate--hydroxymethylglutarate CoA-transferase
Postreplication repair E3 ubiquitin-protein ligase rad18
Sodium- and chloride-dependent GABA transporter 1
Vacuolar protein-sorting-associated protein 24
ATP-dependent RNA helicase SUV3, mitochondrial
putative chloride channel protein UM03490-D
Cytochrome b-c1 complex subunit Rieske, mitochondrial
DNA topoisomerase 2-associated protein pat1
putative tRNA-splicing endonuclease subunit tsp-5
putative ABC transporter ATP-binding protein
putative 3-hydroxyisobutyrate dehydrogenase, mitochondrial
Vacuolar membrane-associated protein IML1
NEDD8-activating enzyme E1 regulatory subunit
Cytosolic Fe-S cluster assembly factor NBP35
Phosphatidylethanolamine N-methyltransferase
putative serine/threonine-protein phosphatase
putative mitochondrial 2-oxoglutarate/malate carrier protein
Hydroxymethylglutaryl-CoA lyase, mitochondrial
Translation machinery-associated protein 46
Septation initiation network scaffold protein cdc11
RNA polymerase II holoenzyme cyclin-like subunit
DNA-directed RNA polymerases I, II, and III subunit RPABC3
Trans-2-enoyl-CoA reductase, mitochondrial
54S ribosomal protein L41, mitochondrial
putative glutathione-dependent formaldehyde-activating enzyme
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
Sensitive to high expression protein 9, mitochondrial
DNA-directed RNA polymerase I subunit RPA12
Calcium-binding mitochondrial carrier SAL1
tRNA (uracil(54)-C(5))-methyltransferase
3-oxoacyl-[acyl-carrier-protein] reductase FabG
DNA polymerase zeta processivity subunit
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
RNA polymerase II transcription factor B subunit 4
Peroxisomal hydratase-dehydrogenase-epimerase
37S ribosomal protein S12, mitochondrial
NAD/NADP-dependent betaine aldehyde dehydrogenase
NmrA-like family domain-containing protein 1
ATPase synthesis protein 25, mitochondrial
putative 37S ribosomal protein S5, mitochondrial
putative serine/threonine-protein kinase VPS15
Transcriptional activator of proteases prtT
putative 4-hydroxy-2-oxoglutarate aldolase, mitochondrial
BUB3-interacting and GLEBS motif-containing protein
6-phosphogluconate dehydrogenase, decarboxylating
putative proline dehydrogenase, mitochondrial
3-hydroxy-3-methylglutaryl-coenzyme A reductase
Structure-specific endonuclease subunit SLX4
High-affinity nicotinic acid transporter
ER degradation-enhancing alpha-mannosidase-like protein 1
Mitochondrial import inner membrane translocase subunit tim50
RNA polymerase II subunit A C-terminal domain phosphatase ssu-72
2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase
putative NADP-dependent mannitol dehydrogenase
DNA-directed RNA polymerase III subunit RPC6
putative peptide methionine sulfoxide reductase
putative dihydroxy-acid dehydratase, mitochondrial
Zinc-binding alcohol dehydrogenase domain-containing protein cipB
putative protein arginine N-methyltransferase 3
Cytochrome c oxidase subunit 4, mitochondrial
Ubiquitin domain-containing protein DSK2
Carboxyvinyl-carboxyphosphonate phosphorylmutase
Peptidyl-prolyl cis-trans isomerase-like 4
4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase
DNA-directed RNA polymerase II subunit RPB2
Long-chain specific acyl-CoA dehydrogenase, mitochondrial
putative eukaryotic translation initiation factor 2 subunit beta
NADH-ubiquinone oxidoreductase assembly factor N7BML
Phosphate-repressible phosphate permease pho-4
5-demethoxyubiquinone hydroxylase, mitochondrial
Phytanoyl-CoA dioxygenase domain-containing protein 1
41 kDa peptidyl-prolyl cis-trans isomerase
ISWI chromatin-remodeling complex ATPase ISW2
putative sterigmatocystin biosynthesis P450 monooxygenase stcF
Endoplasmic reticulum vesicle protein 25
Phosphatidate cytidylyltransferase, mitochondrial
26S proteasome non-ATPase regulatory subunit 9
Mitochondrial distribution and morphology protein 12
Chromatin-remodeling complexes subunit ngg1
DNA-directed RNA polymerase I subunit RPA43
Sterol 3-beta-glucosyltransferase UGT80B1
UPF0658 Golgi apparatus membrane protein
3-hydroxypropionyl-coenzyme A dehydratase
Inactive tetrahydrocannabinolic acid synthase
Aldehyde dehydrogenase family 8 member A1
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b
Positive regulator of purine utilization
UDP-N-acetylglucosamine pyrophosphorylase
Succinate dehydrogenase assembly factor 2, mitochondrial
Carbon catabolite-derepressing protein kinase
Short protein (CB0940_07879, PIA88656.1) was converted to a misc_feature.
Ketol-acid reductoisomerase, mitochondrial
tRNA-dihydrouridine(47) synthase [NAD(P)(+)]
putative SWI/SNF-related regulator of chromatin
Vegetative incompatibility protein HET-E-1
Nitrogen permease regulator 2-like protein
D-lactate dehydrogenase [cytochrome], mitochondrial
putative Ras GTPase-activating-like protein ngap
G/U mismatch-specific uracil DNA glycosylase
3-oxo-Delta(4,5)-steroid 5-beta-reductase