Xanthomonas cassavae CFBP 4642 plasmid unnamed1, whole genome shotgun sequence.
type: Entry
definition: Xanthomonas cassavae CFBP 4642 plasmid unnamed1, whole genome shotgun sequence.
sequence version: NZ_CM002140.1
sequence date: 2022-12-12
sequence: sequence
division: CON
label: NZ_CM002140.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02469933
keyword: WGS
keyword: RefSeq
source: Xanthomonas cassavae CFBP 4642
organism: Xanthomonas cassavae CFBP 4642
taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.
reference: 1
references: 23990580
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002140.1.\nReference-guided assembly based on Xanthomonas axonopodis pv. citri\nstr. 306 plasmid pXAC64 deposited in NC_003922.\nBacteria and source DNA available from CFBP EmerSys, IRHS, INRA 42,\nRue Georges Morel, BP 60057 49071 Beaucouz Cedex, France.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SOAPdenovo v. 2.04; Velvet v. 1.2.02\nAssembly Name :: 20120625\nGenome Coverage :: 3045.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/12/2022 15:09:44\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,756\nCDSs (total) :: 4,649\nGenes (coding) :: 4,322\nCDSs (with protein) :: 4,322\nGenes (RNA) :: 107\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 51\nncRNAs :: 53\nPseudo Genes (total) :: 327\nCDSs (without protein) :: 327\nPseudo Genes (ambiguous residues) :: 0 of 327\nPseudo Genes (frameshifted) :: 141 of 327\nPseudo Genes (incomplete) :: 219 of 327\nPseudo Genes (internal stop) :: 51 of 327\nPseudo Genes (multiple problems) :: 76 of 327\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 59452
topology: circular
so has quality: SO_0000988
location: 1..59452
location: region:1-59452:1
RO_0002162: 1219375

NZ_CM002140
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02469933
type: BioSample
SIO_000068: biosample

1
title: Draft Genome Sequence of the Xanthomonas cassavae Type Strain CFBP 4642
author: Bolot, S.
author: Munoz Bodnar, A.
author: Cunnac, S.
author: Ortiz, E.
author: Szurek, B.
author: Noel, L.D.
author: Arlat, M.
author: Jacques, M.A.
author: Gagnevin, L.
author: Portier, P.
author: Fischer-Le Saux, M.
author: Carrere, S.
author: Koebnik, R.
journal: Genome Announc 1 (4), e00679-13 (2013)
pubmed: 23990580
comments: Publication Status: Online-Only

23990580
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Munoz Bodnar, A.
author: Cunnac, S.
author: Ortiz, E.
author: Szurek, B.
author: Arlat, M.
author: Noel, L.D.
author: Jacques, M.-A.
author: Gagnevin, L.
author: Le Saux, M.
author: Bolot, S.
author: Carrere, S.
author: Koebnik, R.
journal: Submitted (24-JUN-2013) Laboratoire des Interactions Plantes Micro-organismes, INRA, Chemin de Borderouge, Castanet-Tolosan 31200, France

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59452:1
position: 59452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-59452:1:source
so part of: sequence
organism: Xanthomonas cassavae CFBP 4642
mol type: genomic DNA
strain: CFBP 4642
host: Manihot esculenta
culture collection: CFBP:4642
type material: type strain of Xanthomonas cassavae
plasmid: unnamed1
country: Malawi
collection date: 1951

1219375
type: Taxonomy
SIO_000068: taxonomy

XCSCFBP4642_RS30310
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30310
so part of: sequence
location: complement(<1..747)
location: region:1-747:-1
so has part: feature:1-747:-1:exon
subclass of: SO_0000010

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:747:-1
position: 747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-747:-1:exon

XCSCFBP4642_RS30310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172800.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DotA/TraY family protein
translation: MPFSPCPSDGEPCTDQSVAILREVFGPVIDQLAAGADPDTVSATANILASMFSVFNSGVLVVGSLIVSYVAAVGVLNTANDGEAMGRNWSSLWTPVRIVAGGASLLPTASGFSFIQLFGLMVALWGVGLANAVYDKGVTLGLLKPEGLIATVNDPGSQYGLRQFARQYVAASYCANAANSIFAGFGGNTPQVRANSEPDRVFNAGGRREYVFEIKDRNRTTNLAGGAPICGTVKVAEYHAQPRDDATAQ
SIO_010081: XCSCFBP4642_RS30310
subclass of: SO_0000673
so part of: XCSCFBP4642_RS30310
location: complement(<1..747)
location: region:1-747:-1
so has part: feature:1-747:-1:exon

WP_235048319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-747:-1:exon

XCSCFBP4642_RS0123170
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123170
so part of: sequence
location: complement(859..1215)
location: region:859-1215:-1
so has part: feature:859-1215:-1:exon
subclass of: SO_0000010

position:859:-1
position: 859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215:-1
position: 1215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859-1215:-1:exon

XCSCFBP4642_RS0123170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173683.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAWDVNELARRIDPRGSGGVVVYGLIIAVAVYVAASHTWRTGRAEMQTQADAQAQQLADAQAAKLETARLAAQSVVDLHQHCQTYPADYGCENLHGKSLDEVLEMQRKQQAEAINSVR
SIO_010081: XCSCFBP4642_RS0123170
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123170
location: complement(859..1215)
location: region:859-1215:-1
so has part: feature:859-1215:-1:exon

WP_029221878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:859-1215:-1:exon

XCSCFBP4642_RS30420
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30420
so part of: sequence
location: complement(1256..1387)
location: region:1256-1387:-1
so has part: feature:1256-1387:-1:exon
subclass of: SO_0000010

position:1256:-1
position: 1256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387:-1
position: 1387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256-1387:-1:exon

XCSCFBP4642_RS30420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30420
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAWNKNATGKSWEQVRILDLRFAKAGLAFGVIVGVLAGLFFLP
SIO_010081: XCSCFBP4642_RS30420
subclass of: SO_0000673
so part of: XCSCFBP4642_RS30420
location: complement(1256..1387)
location: region:1256-1387:-1
so has part: feature:1256-1387:-1:exon

WP_017154705.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1256-1387:-1:exon

XCSCFBP4642_RS0123180
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123180
so part of: sequence
location: complement(1399..3108)
location: region:1399-3108:-1
so has part: feature:1399-3108:-1:exon
subclass of: SO_0000010

position:1399:-1
position: 1399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3108:-1
position: 3108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399-3108:-1:exon

XCSCFBP4642_RS0123180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MPEIQVGERGNAQWFKYVMLPRVVLFVLAAWLGIWIGTWPFAPSGMARAGYAFNLALWTGIPVSIAYMLYLGWRDRKADKEAATQPAATQDVDDAQREAWRHDFKGLFIGHSTGFLQARKPDNSGWPTPEGAPIELSPEDAAKNILVLGGIGSGKTTRSVNPLLSRVLQQSPGALIFDIKTDYRDTAEKIAEACGRSVKIVGDGGMTLNLFRGCTPEVAASYLKSCFLTEGQGHGDSAFWVDSAVESCRHALNLLNLLDPPNYSIAGCYEAVFYDSVRDKLLAAGAEQIESMTDRQQRLFLQSQRFFVEVWNKHDEKLKRNIMGTINSVLSPFNHPDLVDAFSQASVQGEADLSELIRDGAVFIVNLPVTKYGKEGARFAYLLIKLRFFTMMRERKQHPEWDQQRHVAFICDEYQAIIDPVSDGDFWDKSRSTKTVGIVSMQGVASLTQALGGNRQASDAILQNFRQRIIYRTEDTETLRMIQSVLGQVDVTVTTGSASYSESRSNPTGLHGSASRSESTSETESTSMTRQELFGPADMRALTADECLFIGNIAERSVDEVLRVEPLYM
SIO_010081: XCSCFBP4642_RS0123180
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123180
location: complement(1399..3108)
location: region:1399-3108:-1
so has part: feature:1399-3108:-1:exon

WP_017154704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1399-3108:-1:exon

XCSCFBP4642_RS0123185
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123185
so part of: sequence
location: complement(3151..3456)
location: region:3151-3456:-1
so has part: feature:3151-3456:-1:exon
subclass of: SO_0000010

position:3151:-1
position: 3151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3456:-1
position: 3456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3151-3456:-1:exon

XCSCFBP4642_RS0123185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154703.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAATRRKTYEPDIFRALDQEFAAAPEVPAGERPATAAELVEALRGRIKEMAGKGYTLDQIIERMKAKGIEQPPVRAVKAAMRGDTARQKRPRRKPASQAGA
SIO_010081: XCSCFBP4642_RS0123185
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123185
location: complement(3151..3456)
location: region:3151-3456:-1
so has part: feature:3151-3456:-1:exon

WP_017154703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3151-3456:-1:exon

XCSCFBP4642_RS0123190
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
gene: mobA
locus tag: XCSCFBP4642_RS0123190
so part of: sequence
location: 3855..4250
location: region:3855-4250:1
so has part: feature:3855-4250:1:exon
subclass of: SO_0000010

position:3855:1
position: 3855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4250:1
position: 4250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3855-4250:1:exon

XCSCFBP4642_RS0123190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
gene: mobA
locus tag: XCSCFBP4642_RS0123190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173685.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization protein MobA
translation: MARKKSETRKRTVVAYARMTPEEYADVQEKAAASGNTVSAFIRAASLGRKLRDRQDRLAVAEVVGVAAEMRRLGGLQKHLFYEGGKARSAEYSAVLAALKAAGDELTLALKRLGPDEAEMGLDDEAGPDDY
SIO_010081: XCSCFBP4642_RS0123190
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123190
location: 3855..4250
location: region:3855-4250:1
so has part: feature:3855-4250:1:exon

WP_029221879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3855-4250:1:exon

XCSCFBP4642_RS0123195
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123195
so part of: sequence
location: 4240..6705
location: region:4240-6705:1
so has part: feature:4240-6705:1:exon
subclass of: SO_0000010

position:4240:1
position: 4240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6705:1
position: 6705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4240-6705:1:exon

XCSCFBP4642_RS0123195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154701.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MIIELFGKRNDGGTSFHSAVSYIASLRDQIDPETGEVIDRGMVTTFTNCHSLETAAIEMWGTSALSARIKDPVFAGVLSWQSGENPTDEQMHEAGLLHLKNQGMEGHQYVMSVHRDTDNVHIHFVANRVHPETGRAAGLNHSYMTAVRSAREIEIAQGWQHVEQGPFVVREQGGEKVVDYRHASAQARIAEREAKGKNKPDQARKMEAFSHAESLASYVQGEPKNDALAALQNGGDWQALHKALGVHGLAIKPKGPGFAIHSTSDPNAVPVKASTMAQALGGSRLKSKLGEYQEPTPEIARTEPRREYVKERPKRDLKMREEQRDARAFERAKLRSRYDSYRTDWNAAKAPARADMYEGQQRRRRELATKAKAQRERIRESGLSPTERRAFYSVAAMQAAAERKELAEAIKAERETFRKERPQDYRSWVADRAQEGDPAAIRQVRGWAYADKRKAREIERADAVAENGPHLAVSDGQVHDPAPPRRLSERVSWNVDRDTGTVAYQLDGRDAFRDSGRRIDYTTEGQRDADAIEAGLLLAREKFGGTALNITGPDEFRQRVLAVAVERGLDVRFSDPELERRRIEGLRERQEARRTPGQRPDWTRHRGTIASDGGSPQRPPEAPQEPPARRMTAEEAAAALARPRPVEPVQEVVEALAIQQAGEVYRQQLEREFRERYGERPDPALASGVVSRWMKRQERNLWDRDHGKIDQQVQERMAYLRSDAPDAREFRAQAWKEAQEKYSREHEEWASGRMAALMATSSQEKDTAPEQQPDDARARREAEVRARAEKQKQQAAEREQQQERGRDDDNTPANNGPEIGR
SIO_010081: XCSCFBP4642_RS0123195
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123195
location: 4240..6705
location: region:4240-6705:1
so has part: feature:4240-6705:1:exon

WP_029221880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4240-6705:1:exon

XCSCFBP4642_RS30315
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30315
so part of: sequence
location: 6710..7255
location: region:6710-7255:1
so has part: feature:6710-7255:1:exon
subclass of: SO_0000010

position:6710:1
position: 6710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7255:1
position: 7255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6710-7255:1:exon

XCSCFBP4642_RS30315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172835.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAFAIQKSAVTVTLDGNELVAELPTGQHFRSVDAADLARMLIAAGVDADNVRMLDWREGDTAPMIGHRITILSMLRAAATPEQNAEAYRIALALAIDGPWEPAAARDVAEWIAWWQPSARIAETMPEAERKQLWDAGAWPPAAPEHAGRVPPASVRRSLRFDDRHCRQTIAAYEQAKRKQP
SIO_010081: XCSCFBP4642_RS30315
subclass of: SO_0000673
so part of: XCSCFBP4642_RS30315
location: 6710..7255
location: region:6710-7255:1
so has part: feature:6710-7255:1:exon

WP_029221881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6710-7255:1:exon

XCSCFBP4642_RS0123205
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123205
so part of: sequence
location: 7252..7551
location: region:7252-7551:1
so has part: feature:7252-7551:1:exon
subclass of: SO_0000010

position:7252:1
position: 7252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7551:1
position: 7551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7252-7551:1:exon

XCSCFBP4642_RS0123205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123205
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDDAARLGQSVRFSNDRLTLACVDEILSRGDRNAFLGLLRLIAADPTGEVAEHARTLYAQRGRDSEASKSHYAAAMWLAEAMRQFPIERGRDDSEIDR
SIO_010081: XCSCFBP4642_RS0123205
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123205
location: 7252..7551
location: region:7252-7551:1
so has part: feature:7252-7551:1:exon

WP_017154727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7252-7551:1:exon

XCSCFBP4642_RS0123210
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123210
so part of: sequence
location: 7548..7988
location: region:7548-7988:1
so has part: feature:7548-7988:1:exon
subclass of: SO_0000010

position:7548:1
position: 7548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7988:1
position: 7988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7548-7988:1:exon

XCSCFBP4642_RS0123210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDPLPYIAGVVRDVFRDVPGPGRWPRDDEITRELGTATHYCVLAQGRPDDGPLAVWIEFGTQDADARNRRELGELFARWNGERIAEARATLDGEQAPFATFAAVLFDYLRLPVMAGPVTARHAEIDQHRAMTAALKAPIRSTRRH
SIO_010081: XCSCFBP4642_RS0123210
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123210
location: 7548..7988
location: region:7548-7988:1
so has part: feature:7548-7988:1:exon

WP_017154726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7548-7988:1:exon

XCSCFBP4642_RS0123215
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123215
so part of: sequence
location: 7991..8506
location: region:7991-8506:1
so has part: feature:7991-8506:1:exon
subclass of: SO_0000010

position:7991:1
position: 7991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8506:1
position: 8506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7991-8506:1:exon

XCSCFBP4642_RS0123215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154725.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPSPALPELIDHPALPVFGREVLAAIFRDCDGPGLFGVSDELTRELGDASRYIVALSGRPDAGPLAVWLDFGDVDAAGQRRQRGDFRARWIPVDGKIVGEVAASLDGVPVADFGAFARAFAPYIYADLPGVSGPVVQAHHTLMNADARGVTAAMAARWQSWRGDDSSKLH
SIO_010081: XCSCFBP4642_RS0123215
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123215
location: 7991..8506
location: region:7991-8506:1
so has part: feature:7991-8506:1:exon

WP_029221882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7991-8506:1:exon

XCSCFBP4642_RS0123220
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123220
so part of: sequence
location: complement(8811..9077)
location: region:8811-9077:-1
so has part: feature:8811-9077:-1:exon
subclass of: SO_0000010

position:8811:-1
position: 8811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9077:-1
position: 9077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8811-9077:-1:exon

XCSCFBP4642_RS0123220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173688.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTRPRYTLDAVLDGVADPAAMPEPACKRLDPIRPGEPPVRRLTDAELVALREEMREAGQRMKARLRAREAARNAGTQRFIASADRLPS
SIO_010081: XCSCFBP4642_RS0123220
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123220
location: complement(8811..9077)
location: region:8811-9077:-1
so has part: feature:8811-9077:-1:exon

WP_029221883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8811-9077:-1:exon

XCSCFBP4642_RS0123225
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123225
so part of: sequence
location: complement(9088..9396)
location: region:9088-9396:-1
so has part: feature:9088-9396:-1:exon
subclass of: SO_0000010

position:9088:-1
position: 9088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9396:-1
position: 9396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9088-9396:-1:exon

XCSCFBP4642_RS0123225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016736071.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MNYVLTDDAEADLRGIIRYTRKEWGATQVRTYVATLKAGIARVAAGQGVFKELDALYPALRMARCEHHYVFCLPRQNAPALIVAIFHERMDLMTRLADRLND
SIO_010081: XCSCFBP4642_RS0123225
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123225
location: complement(9088..9396)
location: region:9088-9396:-1
so has part: feature:9088-9396:-1:exon

WP_017173689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9088-9396:-1:exon

XCSCFBP4642_RS0123230
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123230
so part of: sequence
location: complement(9393..9647)
location: region:9393-9647:-1
so has part: feature:9393-9647:-1:exon
subclass of: SO_0000010

position:9393:-1
position: 9393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9647:-1
position: 9647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9393-9647:-1:exon

XCSCFBP4642_RS0123230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004167341.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin
translation: MSRLTIDMTDQQHQSLKALAALQGKTIKQYALERLFPGDTDADQAWQELKALLGDRIKAGLSGNVSDKSIDQILDEELAEGGRA
SIO_010081: XCSCFBP4642_RS0123230
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123230
location: complement(9393..9647)
location: region:9393-9647:-1
so has part: feature:9393-9647:-1:exon

WP_029221884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9393-9647:-1:exon

XCSCFBP4642_RS30320
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30320
so part of: sequence
location: 9856..10362
location: region:9856-10362:1
so has part: feature:9856-10362:1:exon
subclass of: SO_0000010

position:9856:1
position: 9856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10362:1
position: 10362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9856-10362:1:exon

XCSCFBP4642_RS30320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPHYLHVYRTPSGQWSGKVLEEVAGIAVCEHPVEVLESALEQFEGIEDLPKDAELLANYANSCERRPGSREANRSFDFATYDKRGETYADQWFLGAEPMNSTNTNAITLPLPGPFARFCERAHVAPEALLMAFMADLVELSRPTAGECLHARRWFDSVTEPVDAEVTA
SIO_010081: XCSCFBP4642_RS30320
subclass of: SO_0000673
so part of: XCSCFBP4642_RS30320
location: 9856..10362
location: region:9856-10362:1
so has part: feature:9856-10362:1:exon

WP_228325774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9856-10362:1:exon

XCSCFBP4642_RS0123245
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123245
so part of: sequence
location: 10362..11003
location: region:10362-11003:1
so has part: feature:10362-11003:1:exon
subclass of: SO_0000010

position:11003:1
position: 11003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10362-11003:1:exon

XCSCFBP4642_RS0123245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007970353.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MPELERKIARVYLRVSTDEQDLQRQDAVIAEAKAAGYYVAGVYREKASGARPDRPELLRMVADLQPGEVVIAEKIDRISRLPLEEAEQLVAAIRAKGARLAVPGIVDLSELAAVAQGVPRIVLDAVQDMLLRVALQMARDDYEDRRERQRQGIELAKKKGRYTGRKADTKAHERIVALRTAGRSIADTARLAGCSPATVKRVWAEHQKAQAEA
SIO_010081: XCSCFBP4642_RS0123245
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123245
location: 10362..11003
location: region:10362-11003:1
so has part: feature:10362-11003:1:exon

WP_017173692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10362-11003:1:exon

XCSCFBP4642_RS0123250
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123250
so part of: sequence
location: 11083..11712
location: region:11083-11712:1
so has part: feature:11083-11712:1:exon
subclass of: SO_0000010

position:11083:1
position: 11083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11712:1
position: 11712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11083-11712:1:exon

XCSCFBP4642_RS0123250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158739.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MIVGLLNQKGGVGKTTLAVNLAASLTRDGSRVLLIDADPQGSALDWAAARDGEPLFSVVGFPRPTVHKDIAQLGQGYEHIVIDGPPRVTDLARSAIMAADVVLIPVQPSPYDIWAADEVVKLIEEARVYKDALKAAFVVNRKIVNTAIGRDVGEALAAYPVPALAASVTQRVVFAEAVARGQAVHEIDAEGPAAAEIEAVRKELMEFAR
SIO_010081: XCSCFBP4642_RS0123250
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123250
location: 11083..11712
location: region:11083-11712:1
so has part: feature:11083-11712:1:exon

WP_017173693.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11083-11712:1:exon

XCSCFBP4642_RS0123255
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123255
so part of: sequence
location: 11709..11966
location: region:11709-11966:1
so has part: feature:11709-11966:1:exon
subclass of: SO_0000010

position:11709:1
position: 11709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11966:1
position: 11966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11709-11966:1:exon

XCSCFBP4642_RS0123255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014003879.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partition protein ParG
translation: MSKKIQIGGKPTARPAPAGNADEWVSKRAAPATATAPAEPAEKMKRLTIDVAESLHRDIKRKCADEGVKIADVARELLREWSRKS
SIO_010081: XCSCFBP4642_RS0123255
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123255
location: 11709..11966
location: region:11709-11966:1
so has part: feature:11709-11966:1:exon

WP_017173694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11709-11966:1:exon

XCSCFBP4642_RS0123260
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123260
so part of: sequence
location: 12069..12422
location: region:12069-12422:1
so has part: feature:12069-12422:1:exon
subclass of: SO_0000010

position:12069:1
position: 12069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12422:1
position: 12422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12069-12422:1:exon

XCSCFBP4642_RS0123260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154716.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSENPGMLESYDVDLESVPIVSPPIFRELAGAGAVQGACIRSVDDEKGLVIVLRVANQNRVLGVQRALRPRFFQSVDGAASILQQAGITEWAAKIDNWTPRTLKYQQRAAKKEQATT
SIO_010081: XCSCFBP4642_RS0123260
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123260
location: 12069..12422
location: region:12069-12422:1
so has part: feature:12069-12422:1:exon

WP_228325780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12069-12422:1:exon

XCSCFBP4642_RS0123265
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123265
so part of: sequence
location: 12627..14084
location: region:12627-14084:1
so has part: feature:12627-14084:1:exon
subclass of: SO_0000010

position:12627:1
position: 12627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14084:1
position: 14084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12627-14084:1:exon

XCSCFBP4642_RS0123265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017173678.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTRSSAQLALFGPEDEAGAYHDTARWGYFSLLVGQGSHRKQDSYKLAVMPTVLAMVDPTRDTWLSQAEFRVPNRRVVNLARIGLLFADLDTYRLPWAANRTPEQLAAAVLHHCAEEGLPTPSLLVYSGRGIQAKWLLDGTIPRQALPRWNACQRYLVDRLAPLGADPIAKDASRVLRLVNTVNTKSGNVCRVVHVQHGPDGEPVRYGFEFMAEALLPVARWTIEQQRRDRVERRQLKLLPGGKTDNLRGFSGRQLAWDRLEDLRKLAELRGGVQEGERMQHLFWRVNFLLLSGATHSSQMYHEAAALAGELDPAWNYRSKELMTLYGKAKAFEAGEKVTFGGRQLPPLYTPKNDSLISLFRITDDEQRQLRTLISRDMAAERRRKRDRKRDEARRRASGAVDRETYLEGAQERRRAAQALRAEGLSVRAIAARLGVSKSLAALYAAGEGVQSPSRITGAEAGTAGVQSPSPISNGVAPATEDSA
SIO_010081: XCSCFBP4642_RS0123265
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123265
location: 12627..14084
location: region:12627-14084:1
so has part: feature:12627-14084:1:exon

WP_029221886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12627-14084:1:exon

XCSCFBP4642_RS0123270
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123270
so part of: sequence
location: 14368..14622
location: region:14368-14622:1
so has part: feature:14368-14622:1:exon
subclass of: SO_0000010

position:14368:1
position: 14368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14622:1
position: 14622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14368-14622:1:exon

XCSCFBP4642_RS0123270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172840.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPVPEGLDLLGVYWKRDPDFRPLKDKTTIRVNVSIGGGGVELLATGPKWFDTRAEKGGGGAIDLAMHLFRLDFVSAVKRLEGLQ
SIO_010081: XCSCFBP4642_RS0123270
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123270
location: 14368..14622
location: region:14368-14622:1
so has part: feature:14368-14622:1:exon

WP_017173679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14368-14622:1:exon

XCSCFBP4642_RS0123275
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123275
so part of: sequence
location: 14619..15032
location: region:14619-15032:1
so has part: feature:14619-15032:1:exon
subclass of: SO_0000010

position:14619:1
position: 14619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15032:1
position: 15032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14619-15032:1:exon

XCSCFBP4642_RS0123275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154712.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDENTAELDALRERIAADGRWWRAVIGVASLIRERLVTPSLSRREYADDFAFLRIELAEAMTGGAALIEYGVRVGRDSHTVGVVTGRWTGTGLEDVRAWNEGLPCELAEAWRWIERGGLDEMPELRAAQRARWTGH
SIO_010081: XCSCFBP4642_RS0123275
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123275
location: 14619..15032
location: region:14619-15032:1
so has part: feature:14619-15032:1:exon

WP_017173680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14619-15032:1:exon

XCSCFBP4642_RS25690
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25690
so part of: sequence
location: complement(15072..15536)
location: region:15072-15536:-1
so has part: feature:15072-15536:-1:exon
subclass of: SO_0000010

position:15072:-1
position: 15072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15536:-1
position: 15536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15072-15536:-1:exon

XCSCFBP4642_RS25690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25690
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFGNVPPGGSPPDGAIAPAEAAAGNMQLLLAQQAGQPVEDYLSDADSFGALPGPPVGAYETLSVNEMLATEAARRFQSADWNNELTRVTSRALYVDFVRAQGVSNYLQEAIYDKKQSVEALLAVLTSQRLEHVRKRTAEAQERAVRGDAVRSVE
SIO_010081: XCSCFBP4642_RS25690
subclass of: SO_0000673
so part of: XCSCFBP4642_RS25690
location: complement(15072..15536)
location: region:15072-15536:-1
so has part: feature:15072-15536:-1:exon

WP_228325781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15072-15536:-1:exon

XCSCFBP4642_RS30425
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30425
pseudo: true
so part of: sequence
location: complement(<15845..>16244)
location: region:15845-16244:-1
so has part: feature:15845-16244:-1:exon
subclass of: SO_0000010

position:15845:-1
position: 15845
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:16244:-1
position: 16244
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15845-16244:-1:exon

XCSCFBP4642_RS30425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_199285673.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 3
transl table: 11
product: hypothetical protein
SIO_010081: XCSCFBP4642_RS30425
subclass of: SO_0000673
so part of: XCSCFBP4642_RS30425
location: complement(<15845..>16244)
location: region:15845-16244:-1
so has part: feature:15845-16244:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15845-16244:-1:exon

XCSCFBP4642_RS29040
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS29040
pseudo: true
so part of: sequence
location: complement(<16345..16520)
location: region:16345-16520:-1
so has part: feature:16345-16520:-1:exon
subclass of: SO_0000010

position:16345:-1
position: 16345
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:16520:-1
position: 16520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16345-16520:-1:exon

XCSCFBP4642_RS29040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS29040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052942.1
note: incomplete; too short partial abutting assembly gap; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: replication protein A
SIO_010081: XCSCFBP4642_RS29040
subclass of: SO_0000673
so part of: XCSCFBP4642_RS29040
location: complement(<16345..16520)
location: region:16345-16520:-1
so has part: feature:16345-16520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16345-16520:-1:exon

XCSCFBP4642_RS0123285
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123285
so part of: sequence
location: complement(16768..17082)
location: region:16768-17082:-1
so has part: feature:16768-17082:-1:exon
subclass of: SO_0000010

position:16768:-1
position: 16768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17082:-1
position: 17082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16768-17082:-1:exon

XCSCFBP4642_RS0123285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918227.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMLTTTASVVAPKVLKELIAAGSVSAARVEPGDKGLLILVRAGMNERVLGAARGGLRYFQSLDGAASVLQGYGIMKFDVNTEHWVPKTMVRGYKQAPASVDADE
SIO_010081: XCSCFBP4642_RS0123285
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123285
location: complement(16768..17082)
location: region:16768-17082:-1
so has part: feature:16768-17082:-1:exon

WP_005918227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16768-17082:-1:exon

XCSCFBP4642_RS0123290
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123290
so part of: sequence
location: complement(17227..17550)
location: region:17227-17550:-1
so has part: feature:17227-17550:-1:exon
subclass of: SO_0000010

position:17227:-1
position: 17227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17550:-1
position: 17550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17227-17550:-1:exon

XCSCFBP4642_RS0123290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSMKGKPNTAQFKPPKDPTAFLEGGEADKAEKPLVAPAAVTTTPAATPPAAEETQRYGRARVQKIFNFPEELADHLRREALKRSEEKGGRVTEKDIVIEALEAFLKG
SIO_010081: XCSCFBP4642_RS0123290
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123290
location: complement(17227..17550)
location: region:17227-17550:-1
so has part: feature:17227-17550:-1:exon

WP_005918229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17227-17550:-1:exon

XCSCFBP4642_RS0123295
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123295
so part of: sequence
location: complement(17547..18173)
location: region:17547-18173:-1
so has part: feature:17547-18173:-1:exon
subclass of: SO_0000010

position:17547:-1
position: 17547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18173:-1
position: 18173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17547-18173:-1:exon

XCSCFBP4642_RS0123295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123295
inference: COORDINATES: protein motif:HMM:NF013793.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIFACVNTKGGVGKTTTAVHLAVMLARQGKTLLIDGDPQASAASWAAWRRETQYDPSPTTTCLAGKAILAEGKQLATGFEHVVVDAGGRDSVGLRSALLLAQSAVIPVGASNLDAAAMTDLLEVVELARDYNPELDVRVLLTRVDPRTKDAAEMLEFLAEQKLTVLPTKVCERVAFRRAIGEGATVQELGRDQAAIAEMEAFFKEVMA
SIO_010081: XCSCFBP4642_RS0123295
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123295
location: complement(17547..18173)
location: region:17547-18173:-1
so has part: feature:17547-18173:-1:exon

WP_005918230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17547-18173:-1:exon

XCSCFBP4642_RS29560
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS29560
so part of: sequence
location: 18346..18483
location: region:18346-18483:1
so has part: feature:18346-18483:1:exon
subclass of: SO_0000010

position:18346:1
position: 18346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18483:1
position: 18483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18346-18483:1:exon

XCSCFBP4642_RS29560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS29560
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918231.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHAADVAVVNDDTDVQVISDHQPPKRWPSGEPLVAGVEFERELFE
SIO_010081: XCSCFBP4642_RS29560
subclass of: SO_0000673
so part of: XCSCFBP4642_RS29560
location: 18346..18483
location: region:18346-18483:1
so has part: feature:18346-18483:1:exon

WP_005918231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18346-18483:1:exon

XCSCFBP4642_RS0123305
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123305
so part of: sequence
location: complement(19270..19623)
location: region:19270-19623:-1
so has part: feature:19270-19623:-1:exon
subclass of: SO_0000010

position:19270:-1
position: 19270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19623:-1
position: 19623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19270-19623:-1:exon

XCSCFBP4642_RS0123305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELLQDADTLVRRFEQADEALSGKIEKATTDAAGKAFLAAKLNFESVIDKNAEKLTEAGRHAAAQIGNQLNSGAAQVVAANAAFESKARRFVLLLAGFAFVAGVVGGFVGAKLAGM
SIO_010081: XCSCFBP4642_RS0123305
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123305
location: complement(19270..19623)
location: region:19270-19623:-1
so has part: feature:19270-19623:-1:exon

WP_017173624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19270-19623:-1:exon

XCSCFBP4642_RS0123310
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
gene: stbB
locus tag: XCSCFBP4642_RS0123310
so part of: sequence
location: complement(19672..20379)
location: region:19672-20379:-1
so has part: feature:19672-20379:-1:exon
subclass of: SO_0000010

position:19672:-1
position: 19672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20379:-1
position: 20379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19672-20379:-1:exon

XCSCFBP4642_RS0123310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
gene: stbB
locus tag: XCSCFBP4642_RS0123310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172642.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: StbB family protein
translation: MKVAVINFSGNPGKTTLVDNLLAPRMGAPKFEIETINAGSATDTDAQRLKGKDYGGLQEDLMTLDSAIVDVGASNVEEFIKQMGQFEGSHEEFDYFVVPTVSEKKQQLDTVSTIETLAGLGVPAKKIRVVFNKVELEDANDVPRLFGTVFGLHAETKCFTLRPEAVVFKNEIFDRLRTLKKTVSEIVADETDYRAMLREAKDEDAKAHAVSMISAQRLAKSANKNLDDVYKALFK
SIO_010081: XCSCFBP4642_RS0123310
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123310
location: complement(19672..20379)
location: region:19672-20379:-1
so has part: feature:19672-20379:-1:exon

WP_029221887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19672-20379:-1:exon

XCSCFBP4642_RS0123315
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123315
so part of: sequence
location: complement(20376..20822)
location: region:20376-20822:-1
so has part: feature:20376-20822:-1:exon
subclass of: SO_0000010

position:20376:-1
position: 20376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20822:-1
position: 20822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20376-20822:-1:exon

XCSCFBP4642_RS0123315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKSDLTQALTAMEPKTKAAKVREVMPVIEQRIAAGVRIADILKTLKDSGIELTEATLKSYLYRYRKKQGKPVGRQAQPVAPRADNAPASTQSGESVSYETDSAETPTSRGPISMQELDRLMKPDPAELAERAARYERLAKEKWRKHK
SIO_010081: XCSCFBP4642_RS0123315
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123315
location: complement(20376..20822)
location: region:20376-20822:-1
so has part: feature:20376-20822:-1:exon

WP_029221888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20376-20822:-1:exon

XCSCFBP4642_RS0123320
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123320
so part of: sequence
location: 21170..21565
location: region:21170-21565:1
so has part: feature:21170-21565:1:exon
subclass of: SO_0000010

position:21170:1
position: 21170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21565:1
position: 21565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21170-21565:1:exon

XCSCFBP4642_RS0123320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007966864.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSGKSIPVWYSEEDRRRVEEAAALAGYKHLSKYIRDKSLDRGSHRESGRDSMEAWADRQELVGRLAEIERSQKGAHVLLAMLLFLVRKKATTGEFNELVLACENVGVPADVLAVSLPELAALLTRFTEDS
SIO_010081: XCSCFBP4642_RS0123320
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123320
location: 21170..21565
location: region:21170-21565:1
so has part: feature:21170-21565:1:exon

WP_029221889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21170-21565:1:exon

XCSCFBP4642_RS0123325
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123325
so part of: sequence
location: 21661..21930
location: region:21661-21930:1
so has part: feature:21661-21930:1:exon
subclass of: SO_0000010

position:21661:1
position: 21661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21930:1
position: 21930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21661-21930:1:exon

XCSCFBP4642_RS0123325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017161529.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLEPELRDTFMAEAAADDRPAAQVVRELMRDYITRRREAREYDEFVRRKVEVARKQRDAGLHFSNEEVEADAASRRVDLLRRAGDAGL
SIO_010081: XCSCFBP4642_RS0123325
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123325
location: 21661..21930
location: region:21661-21930:1
so has part: feature:21661-21930:1:exon

WP_029221890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21661-21930:1:exon

XCSCFBP4642_RS0123330
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123330
so part of: sequence
location: 21927..22220
location: region:21927-22220:1
so has part: feature:21927-22220:1:exon
subclass of: SO_0000010

position:21927:1
position: 21927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22220:1
position: 22220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21927-22220:1:exon

XCSCFBP4642_RS0123330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158795.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MKVRWIAAARQDRADIIDYIAVENPRAALKMDDLFSEAAKRLGEFPKLGCTGKIPGTRELIPHESYRLVYEVDEAADTVWVMTLIHTARQWPPARDD
SIO_010081: XCSCFBP4642_RS0123330
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123330
location: 21927..22220
location: region:21927-22220:1
so has part: feature:21927-22220:1:exon

WP_029221891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21927-22220:1:exon

XCSCFBP4642_RS25695
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25695
pseudo: true
so part of: sequence
location: 22333..22952
location: region:22333-22952:1
so has part: feature:22333-22952:1:exon
subclass of: SO_0000010

position:22333:1
position: 22333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22952:1
position: 22952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22333-22952:1:exon

XCSCFBP4642_RS25695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25695
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345593.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: XCSCFBP4642_RS25695
subclass of: SO_0000673
so part of: XCSCFBP4642_RS25695
location: 22333..22952
location: region:22333-22952:1
so has part: feature:22333-22952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22333-22952:1:exon

XCSCFBP4642_RS30325
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30325
so part of: sequence
location: 23229..23492
location: region:23229-23492:1
so has part: feature:23229-23492:1:exon
subclass of: SO_0000010

position:23229:1
position: 23229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23492:1
position: 23492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23229-23492:1:exon

XCSCFBP4642_RS30325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005917872.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGADNRADSASFEVTGSCVSMASLRKQYPRLIVMDYARGVNEHAVYTLGAQIGDAIVAYSFPASKLDCMSRVFITPAKITKKKLGIA
SIO_010081: XCSCFBP4642_RS30325
subclass of: SO_0000673
so part of: XCSCFBP4642_RS30325
location: 23229..23492
location: region:23229-23492:1
so has part: feature:23229-23492:1:exon

WP_228325800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23229-23492:1:exon

XCSCFBP4642_RS0123345
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123345
so part of: sequence
location: 23724..25298
location: region:23724-25298:1
so has part: feature:23724-25298:1:exon
subclass of: SO_0000010

position:23724:1
position: 23724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25298:1
position: 25298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23724-25298:1:exon

XCSCFBP4642_RS0123345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017164708.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MQKHEVESATLLFGVGLPLAGWLAGTYIGNVPLSPFPQALTAALHATPNNPFIVGGVVAGLGLAASAAYLFHEYGDDGFRGAPYRRWMRGSKMANWHKVKSQVNAANRGENRRRRAEQRGAKDLPPVMIGPMPMPLHLENRNTLICASIGAGKSVAMESMISSAVKRRDKMAVIDPNGTFYSKFSFPGDTILNPFDRRSSGWTLFNEIKGVHDFDRMAKSVIPPQIDPSDEQWCAYARDVLADTMRKLVETNNQDQDTLVNLLVREDGEVIRAFLVNTDSQGYFRDNAEKAIASIQFMMNKYVRPLSFMTKGDFSLHKWVNDPNAGNLFVTWREDMRAAQRPLVATWIDTICATILSISDDAQHLSRRLWLFLDELESLGRLESFVPAATKGRKHGLRMAASIQDWAQLDETYGKDAAKTLLGCFRNYLIFGASNALNADKASEILGKQHVERIQITTNAGGIGGGGRSRHVVASPPEPVVLDSEISNLKDLEGYVMFAEDFPIAKIKLPYVKYPHRAAAIDIK
SIO_010081: XCSCFBP4642_RS0123345
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123345
location: 23724..25298
location: region:23724-25298:1
so has part: feature:23724-25298:1:exon

WP_029221893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23724-25298:1:exon

XCSCFBP4642_RS0123350
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123350
so part of: sequence
location: 25312..28305
location: region:25312-28305:1
so has part: feature:25312-28305:1:exon
subclass of: SO_0000010

position:25312:1
position: 25312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28305:1
position: 28305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25312-28305:1:exon

XCSCFBP4642_RS0123350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157753.1
GO function: GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative relaxase
translation: MLNVTPIRGNNQYAAAHYFSAADDYYAKENPGEWQGQGAQVLGLTGPVEQAQLSRLLDGRLPNGERIQTTFDPIDNKKRMGLDLTFSAPKSVSMQALVAGDKDVTAAHDRAVTRALEQVERLAEARKKVKGKSYRERTGNMVIGKFRHEMSRAKDPQLHTHSVVLNMTQRADGAWRALSNEDIFRVQHEVDALYKAELARGLQALGYAIRLVDDQGNFELDHISRDQIEAFSARSRIIEEALANEGKTRATATTLEKQIISLATRPRKDESDRDLVKQYWVEKSREFGIDYGPRSQLDGRTYEAGDSIGGRGRGRGRGRERGDAGDRIAATSLPARLTPAQAVVQYAINHLTEREAVVRETALTATALRRAVGLAGPDEVRAEIKRLVGQGALIEAVPAYRMADRKDGPALSSAGWKSYLQDLKGWSDKQAQQYVSNAIKQGSLVPAEKRYTTQKALAREKAILAIERTGRGAIEPIMTAAAVKTALESSALNAGQRSAVETIVSTKNRFVGIQGDAGTGKTYTVNQAVALIKQASAVSEGYRTVALAPYGNQVKALKNEGLEAHTLASFLYTKDKPIDGKTIIVLDESGVVGARQMEQVMRIVEKSGARMVLLGDTKQTEAIEAGKPFAQLQQDGMQTARISEIQRQKDHELKTAVEQAAEGRVTQSLAHIKHVEELKEPTERHRAIVNDYIQLTEPERRETLIVAGTNEARREINRMVRESLDLTGKGREFETLTRVDMTQAQRRFAPSYQPGMVIQPEKDYQKAGLTRGETYRVKEALPGNALVLQRQDGTTTTINPRKATQLSVYHLERAELSVGDTVRINRNDPGRDLTNGDRMRVAGVIGGVVKLESVGQRDGRPARALELPTNRPLHLEHAYASTVHSAQGLTNDRALIALDTKSRTTSMNLYYVAISRACHEARVYTNSVKELPAAIARRFDKTTALAIQRERQLQRRAAGMQPKGAADGKQALQRQQLQQQRKQPASGKKPSEYGRFG
SIO_010081: XCSCFBP4642_RS0123350
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123350
location: 25312..28305
location: region:25312-28305:1
so has part: feature:25312-28305:1:exon

WP_029221894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25312-28305:1:exon

XCSCFBP4642_RS0123355
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123355
so part of: sequence
location: complement(28358..28684)
location: region:28358-28684:-1
so has part: feature:28358-28684:-1:exon
subclass of: SO_0000010

position:28358:-1
position: 28358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28684:-1
position: 28684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28358-28684:-1:exon

XCSCFBP4642_RS0123355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019303585.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MMRGDFVTIAMQGDFGKPRPALVIQADQFDAHTTVTVLPVTSTLVAAPLLRITIHPSTDNGLQKPSQVMVDKAMTVKRDKVGRAFGRVDADALVEIERCLAVFLGIAK
SIO_010081: XCSCFBP4642_RS0123355
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123355
location: complement(28358..28684)
location: region:28358-28684:-1
so has part: feature:28358-28684:-1:exon

WP_003491151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28358-28684:-1:exon

XCSCFBP4642_RS25700
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25700
so part of: sequence
location: complement(28681..28851)
location: region:28681-28851:-1
so has part: feature:28681-28851:-1:exon
subclass of: SO_0000010

position:28681:-1
position: 28681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28851:-1
position: 28851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28681-28851:-1:exon

XCSCFBP4642_RS25700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25700
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158763.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin MazE family protein
translation: MAGLRPVQIWVPDTRRPDFAEECRRQCRLAAQADMADTDMQRFMDEALADMDGWTE
SIO_010081: XCSCFBP4642_RS25700
subclass of: SO_0000673
so part of: XCSCFBP4642_RS25700
location: complement(28681..28851)
location: region:28681-28851:-1
so has part: feature:28681-28851:-1:exon

WP_017157755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28681-28851:-1:exon

XCSCFBP4642_RS0123365
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123365
so part of: sequence
location: complement(29077..29472)
location: region:29077-29472:-1
so has part: feature:29077-29472:-1:exon
subclass of: SO_0000010

position:29077:-1
position: 29077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29472:-1
position: 29472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29077-29472:-1:exon

XCSCFBP4642_RS0123365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKVAVDTNVLVRAVVRDDPAQADVAAAVLTDAELIAVALPCLCEFVWVLMRVYGFQQSDAADAIRALLAAANVEVNRPAVEAGLLVLDAGGDFADGVIAYEGNWLGGETFVSFDKKAVTLLSAQGQSAHLL
SIO_010081: XCSCFBP4642_RS0123365
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123365
location: complement(29077..29472)
location: region:29077-29472:-1
so has part: feature:29077-29472:-1:exon

WP_029221895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29077-29472:-1:exon

XCSCFBP4642_RS0123370
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123370
so part of: sequence
location: complement(29469..29720)
location: region:29469-29720:-1
so has part: feature:29469-29720:-1:exon
subclass of: SO_0000010

position:29469:-1
position: 29469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29720:-1
position: 29720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29469-29720:-1:exon

XCSCFBP4642_RS0123370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019334760.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MTTLTVTARGQVTFRKDVLQHLGIRPGDKIELDLLPDGRGVLKAARPAGTIASFVGLLAGKTQKVATIEEINEAAAQGWAGKQ
SIO_010081: XCSCFBP4642_RS0123370
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123370
location: complement(29469..29720)
location: region:29469-29720:-1
so has part: feature:29469-29720:-1:exon

WP_003108276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29469-29720:-1:exon

XCSCFBP4642_RS0123375
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123375
so part of: sequence
location: 29899..30471
location: region:29899-30471:1
so has part: feature:29899-30471:1:exon
subclass of: SO_0000010

position:29899:1
position: 29899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30471:1
position: 30471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29899-30471:1:exon

XCSCFBP4642_RS0123375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MALIGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRNGDVLAVWRLDRLGRSMPHLIETIGALEARGVGFRSLTEAIDTTTPGGRLIFHVFGALGQFERDLIRERTKAGLSAAAARGRKGGRKPVITADKLQQARKHIANGLNVREAATRLKVSKTALYAALQSTSAGDLQK
SIO_010081: XCSCFBP4642_RS0123375
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123375
location: 29899..30471
location: region:29899-30471:1
so has part: feature:29899-30471:1:exon

WP_003490825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29899-30471:1:exon

XCSCFBP4642_RS0123380
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123380
so part of: sequence
location: 30590..31687
location: region:30590-31687:1
so has part: feature:30590-31687:1:exon
subclass of: SO_0000010

position:30590:1
position: 30590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31687:1
position: 31687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30590-31687:1:exon

XCSCFBP4642_RS0123380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172638.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MRGVDVFSEQLFTVKRLDDFIPGTHPLRPVREMVNATLRRLDGLFEPMYAPSYKGGRPSIAPEKLVRAMLLQVFYSIRSERQLMEQVQYNLLFRWFIGLSMDDAVWVPTVFTKNRERLIEHDVVVALFNDVVAMADAEGWLSGEHFSVDGTLIQAWAGHKSFVRKDGADDGDGADFRGTSRSNDTHASTTDPDARLYRKGKTASELRYMGHTLTDNRHGLIANARVTHADGYAEREAAKAMIGDACQANPEGALTLGADKGYDAAEFVKAVQEMKVVPHIAQNTSNRRSAVPNAIAASDGYAISQKKRKLIEQGFGWAKLIGRIRQVMVRGLDKVDQIFVLNMTAYNLVRMRTLGQLRLQSEKPA
SIO_010081: XCSCFBP4642_RS0123380
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123380
location: 30590..31687
location: region:30590-31687:1
so has part: feature:30590-31687:1:exon

WP_017172638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30590-31687:1:exon

XCSCFBP4642_RS27920
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS27920
so part of: sequence
location: 31885..32262
location: region:31885-32262:1
so has part: feature:31885-32262:1:exon
subclass of: SO_0000010

position:31885:1
position: 31885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32262:1
position: 32262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31885-32262:1:exon

XCSCFBP4642_RS27920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS27920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010379618.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MDSADYVLRCYRYIELNPVRARLTDNPAAYRWSSCPANLGKRKHSALTPHPCWLTLGSDPIQRSNAYRALLNEALSDELLANIRLHLQQQRALGHDTFRAMVEVKTHRFAGVRPAHRPRKPNTDD
SIO_010081: XCSCFBP4642_RS27920
subclass of: SO_0000673
so part of: XCSCFBP4642_RS27920
location: 31885..32262
location: region:31885-32262:1
so has part: feature:31885-32262:1:exon

WP_080581436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31885-32262:1:exon

XCSCFBP4642_RS0123385
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123385
so part of: sequence
location: 32669..33298
location: region:32669-33298:1
so has part: feature:32669-33298:1:exon
subclass of: SO_0000010

position:32669:1
position: 32669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33298:1
position: 33298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32669-33298:1:exon

XCSCFBP4642_RS0123385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017167724.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAQADVDQFAIYSSVYRSYGNIGTLNVKIDLANGTVTPSSVKKMAAPAADQSAAFASAFDVRREGATRQQVIQWLEANDWQVPNTGENFIFFIQQVLSNAYKWRSSEDYSIRIDTTFNDKSRAIFAYDSAKRAIVYVEAYDSAGNLIGTSSNEPIKVDYSSYESPDAASRPDYQRGIDWLTSSGAATISGGTVTVGSGTVLVGDVVQVK
SIO_010081: XCSCFBP4642_RS0123385
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123385
location: 32669..33298
location: region:32669-33298:1
so has part: feature:32669-33298:1:exon

WP_017167724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32669-33298:1:exon

XCSCFBP4642_RS27925
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS27925
so part of: sequence
location: 33298..33894
location: region:33298-33894:1
so has part: feature:33298-33894:1:exon
subclass of: SO_0000010

position:33894:1
position: 33894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33298-33894:1:exon

XCSCFBP4642_RS27925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS27925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005997165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTVRIRERRISLRSREAALLLGTLACSALFLVTQNQVGLLGYAIAPFLLLAFFVLQADLVWRGHKTPGSAFAISGAAWLAFSALAAYVFTGPGRTQVFLDTWLKALAGAGFLAALFFLSVLTARKRSVNLYWYLAASLAIATAAAAVHPGKSGKIEIQCERGTCAAGIIAFWPGAFQASNGKRSISVVLPQSNGKAQ
SIO_010081: XCSCFBP4642_RS27925
subclass of: SO_0000673
so part of: XCSCFBP4642_RS27925
location: 33298..33894
location: region:33298-33894:1
so has part: feature:33298-33894:1:exon

WP_080581435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33298-33894:1:exon

XCSCFBP4642_RS0123390
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123390
so part of: sequence
location: 34048..35010
location: region:34048-35010:1
so has part: feature:34048-35010:1:exon
subclass of: SO_0000010

position:34048:1
position: 34048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35010:1
position: 35010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34048-35010:1:exon

XCSCFBP4642_RS0123390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1595 family transposase
translation: MGINIVQFQPGLSLSEFMDRYGTEAKCYRALYRWRWPKGFRCPQCDGRARSRFRRDDQVYYQCRACRHQTTLRAGTLLQSSKLSLRLWMQAMYLLTSSKTNLAALELKRHLGVTYKAAWRMKHKIMQAMTEREEPRKLKGFVQIDDAYLGGERSGGKRGRGSENKQPFVIAVQVDQNNEHPSFAVIEPVKAFDNASLKDWIARRLEPECEVYSDGLACFRRLEEAGHAHTTLDTGGGRAATDVQGARWLNVVLGNIKRAISGTYHAVGQAKYARRYLAEAAYRFNRRFDLKQMLPRLATALLRCTPCPERVLRMASNFHG
SIO_010081: XCSCFBP4642_RS0123390
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123390
location: 34048..35010
location: region:34048-35010:1
so has part: feature:34048-35010:1:exon

WP_029218992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34048-35010:1:exon

XCSCFBP4642_RS0123395
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123395
so part of: sequence
location: 35030..35227
location: region:35030-35227:1
so has part: feature:35030-35227:1:exon
subclass of: SO_0000010

position:35030:1
position: 35030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35227:1
position: 35227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35030-35227:1:exon

XCSCFBP4642_RS0123395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKALLVVLGAFGGLALSMIYLGMVGAPPSARWFFPIFAGLLCGTVFGLQFGAWAVKKTGKAPAK
SIO_010081: XCSCFBP4642_RS0123395
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123395
location: 35030..35227
location: region:35030-35227:1
so has part: feature:35030-35227:1:exon

WP_017172653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35030-35227:1:exon

XCSCFBP4642_RS0123410
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123410
so part of: sequence
location: 36200..36490
location: region:36200-36490:1
so has part: feature:36200-36490:1:exon
subclass of: SO_0000010

position:36200:1
position: 36200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36490:1
position: 36490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36200-36490:1:exon

XCSCFBP4642_RS0123410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003490957.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFNDEEAMLTLTKKELAVLDEAQPDYAVYLVETEHENSRWWRMTLKLPTQDKVYEVVTALGKTKLWKRLDIAVDFIKESCPHTKSVFVVFAPWHN
SIO_010081: XCSCFBP4642_RS0123410
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123410
location: 36200..36490
location: region:36200-36490:1
so has part: feature:36200-36490:1:exon

WP_003490957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36200-36490:1:exon

XCSCFBP4642_RS0123415
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123415
so part of: sequence
location: complement(37733..39100)
location: region:37733-39100:-1
so has part: feature:37733-39100:-1:exon
subclass of: SO_0000010

position:37733:-1
position: 37733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39100:-1
position: 39100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37733-39100:-1:exon

XCSCFBP4642_RS0123415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014504331.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MRTRRPAAEDTPAEELFRSRLENQIDLRHPLAQLSQPMPWAALEQALCSHLPATPAGGGRPALPVRLMTGLLYLKHAFDLSDEAVCERWLENPYWQFFTGEVVFQTRLPCDASSLTRWRQRLGEAGMEEVLAHTINTAHAMRAVDARELSRVIVDTTVQEKAIAYPTDSRLLEVARKKLVLLAKRHGIALRQTYARQGPALSRKAGRYAHARQFKRMRAALRRQRTVLGRVVRDMQRKLDAVEDSVHERIAVWLDRAQRLYTQHPKDKHKLYALHAPEVECIGKGKARQPYEFGVKVGIAVTACKGLVVGARSFPGNPYDGDTLAEQLEQTRGLLQDVAVAPTVAIVDLGYRGREVDGVQVLHRGKAKTLTRRQWHWIKRRQAVEPVIGHLKDDCRLRRCRLKGTQGDALHVLGCAAGYNLRWLMRWIALLRAWIRAMSQLSLDAMDRSQLAIDV
SIO_010081: XCSCFBP4642_RS0123415
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123415
location: complement(37733..39100)
location: region:37733-39100:-1
so has part: feature:37733-39100:-1:exon

WP_029221896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37733-39100:-1:exon

XCSCFBP4642_RS29565
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS29565
so part of: sequence
location: 39404..40162
location: region:39404-40162:1
so has part: feature:39404-40162:1:exon
subclass of: SO_0000010

position:39404:1
position: 39404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40162:1
position: 40162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39404-40162:1:exon

XCSCFBP4642_RS29565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS29565
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007969282.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGNKAVALSAAALAVVVGGIIWTHEARKDDEGSMQGISQSETPNAANESVKERAPSPSIEGGVDLRNDSRVRHPFPEVPRTRDGMSFDNDPGYAESKAEQKWLDRHGYPNEKQLEAYMVAPEALLKQASDAGDKVAQTILDARLLPSDPTAQQRLVDAGAEGNLFALNMLASFQGGSASGDPVAAYAVSRVAEMRGDTRASVTREVMMSKSLSTEQRMLGESEALRLNAEIDRIYTSKYGRAPVLDKRPIGQ
SIO_010081: XCSCFBP4642_RS29565
subclass of: SO_0000673
so part of: XCSCFBP4642_RS29565
location: 39404..40162
location: region:39404-40162:1
so has part: feature:39404-40162:1:exon

WP_228325783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39404-40162:1:exon

XCSCFBP4642_RS0123425
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123425
so part of: sequence
location: 40204..40698
location: region:40204-40698:1
so has part: feature:40204-40698:1:exon
subclass of: SO_0000010

position:40204:1
position: 40204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40698:1
position: 40698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40204-40698:1:exon

XCSCFBP4642_RS0123425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011036796.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGIMKKAGVAAMSLTGLMGVAFACSELPMPPLVPIQVPLTQLPKFSDSKNPANALFMDRLDSAASKVLGEGNWVTNSYKGYVSYTVKILNYTGRGMVYIEKPCGKKAKEMAEKIAQQTSSGGGGGGSAGTGGGGGGVLIGGGCYGSCGGRIPTGDVGPIETLPS
SIO_010081: XCSCFBP4642_RS0123425
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123425
location: 40204..40698
location: region:40204-40698:1
so has part: feature:40204-40698:1:exon

WP_029221898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40204-40698:1:exon

XCSCFBP4642_RS25710
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25710
pseudo: true
so part of: sequence
location: complement(41045..>41277)
location: region:41045-41277:-1
so has part: feature:41045-41277:-1:exon
subclass of: SO_0000010

position:41045:-1
position: 41045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41277:-1
position: 41277
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41045-41277:-1:exon

XCSCFBP4642_RS25710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25710
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477429.1
note: incomplete; too short partial abutting assembly gap; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 3
transl table: 11
product: recombinase family protein
SIO_010081: XCSCFBP4642_RS25710
subclass of: SO_0000673
so part of: XCSCFBP4642_RS25710
location: complement(41045..>41277)
location: region:41045-41277:-1
so has part: feature:41045-41277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41045-41277:-1:exon

XCSCFBP4642_RS29320
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS29320
so part of: sequence
location: complement(41434..41604)
location: region:41434-41604:-1
so has part: feature:41434-41604:-1:exon
subclass of: SO_0000010

position:41434:-1
position: 41434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41604:-1
position: 41604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41434-41604:-1:exon

XCSCFBP4642_RS29320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS29320
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATKKNDDPQQIGALLGKLVPRDVLRTANAVSKNPKRKGLTAQDEGSGEQWNREVS
SIO_010081: XCSCFBP4642_RS29320
subclass of: SO_0000673
so part of: XCSCFBP4642_RS29320
location: complement(41434..41604)
location: region:41434-41604:-1
so has part: feature:41434-41604:-1:exon

WP_160170351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41434-41604:-1:exon

XCSCFBP4642_RS0123440
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123440
so part of: sequence
location: complement(41628..41885)
location: region:41628-41885:-1
so has part: feature:41628-41885:-1:exon
subclass of: SO_0000010

position:41628:-1
position: 41628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41885:-1
position: 41885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41628-41885:-1:exon

XCSCFBP4642_RS0123440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918078.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATKKSADLTGLVATKGSAAPVADMPPRTLKPTPTNDDPANNVPLNFRVSADLRRRFRMFAASHDLKLNELLRLAFTEYEKRHNS
SIO_010081: XCSCFBP4642_RS0123440
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123440
location: complement(41628..41885)
location: region:41628-41885:-1
so has part: feature:41628-41885:-1:exon

WP_029218404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41628-41885:-1:exon

XCSCFBP4642_RS0123445
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123445
so part of: sequence
location: complement(41887..42537)
location: region:41887-42537:-1
so has part: feature:41887-42537:-1:exon
subclass of: SO_0000010

position:41887:-1
position: 41887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42537:-1
position: 42537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41887-42537:-1:exon

XCSCFBP4642_RS0123445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007967576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKTLVLASQKGGAGKTTLAAHLAIAAEQAGVGPAVLIDTDPQGSLSAWWNSRDADTPALAAATLAELPAKLEALASAGFKLAVIDTPPAITDAIRDVVKLADLVLIPTRPSPHDLRAVGSTVDIAQEAGRPFAFALTQAKPTARLTVQAVAALSAHGPVAPSIVHDRVDYAGSMVDGRTVQETDGKGRSAEEITALFAFVQERMNDKKKARKKETV
SIO_010081: XCSCFBP4642_RS0123445
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123445
location: complement(41887..42537)
location: region:41887-42537:-1
so has part: feature:41887-42537:-1:exon

WP_029218403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41887-42537:-1:exon

XCSCFBP4642_RS25715
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25715
so part of: sequence
location: complement(42631..42804)
location: region:42631-42804:-1
so has part: feature:42631-42804:-1:exon
subclass of: SO_0000010

position:42631:-1
position: 42631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42804:-1
position: 42804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42631-42804:-1:exon

XCSCFBP4642_RS25715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25715
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004167344.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELFRADPDHAAALLDAVRRDGDADELRGLLRQLAAAFGPEWPGFTDTERETLDRG
SIO_010081: XCSCFBP4642_RS25715
subclass of: SO_0000673
so part of: XCSCFBP4642_RS25715
location: complement(42631..42804)
location: region:42631-42804:-1
so has part: feature:42631-42804:-1:exon

WP_033898849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42631-42804:-1:exon

XCSCFBP4642_RS0123455
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123455
so part of: sequence
location: complement(43035..43652)
location: region:43035-43652:-1
so has part: feature:43035-43652:-1:exon
subclass of: SO_0000010

position:43035:-1
position: 43035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43652:-1
position: 43652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43035-43652:-1:exon

XCSCFBP4642_RS0123455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918089.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MARHKQDPGTLDLMSGRLLVGYARVSTDDQELTNQRTELHAAGCSRIFAEKITGTHSKRAELARMLDHLRAGDVVTVTRLDRLARNTRDLLDIAEQLQAKGAGLRSLAEPWADTTSPAGRMVLTVFAGIAEFERSLIVERTRNGRTAAKARGVRFGRRPTLTPAQIAHARRLIDEDGQTATQAAALLGVHRATLYRALTKEDGAK
SIO_010081: XCSCFBP4642_RS0123455
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123455
location: complement(43035..43652)
location: region:43035-43652:-1
so has part: feature:43035-43652:-1:exon

WP_084624368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43035-43652:-1:exon

XCSCFBP4642_RS0123460
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123460
so part of: sequence
location: 43918..44208
location: region:43918-44208:1
so has part: feature:43918-44208:1:exon
subclass of: SO_0000010

position:43918:1
position: 43918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44208:1
position: 44208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43918-44208:1:exon

XCSCFBP4642_RS0123460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014508712.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1778 domain-containing protein
translation: MPTMSTAPSKRETLNIRIKPEERSLIDRAAKARGKNRTDFVLEAARSAAEEALLDQTIISASPDAYAAFLARLDMPPQPNERLRKTMQTPAPWEKA
SIO_010081: XCSCFBP4642_RS0123460
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123460
location: 43918..44208
location: region:43918-44208:1
so has part: feature:43918-44208:1:exon

WP_017154722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43918-44208:1:exon

XCSCFBP4642_RS0123465
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123465
so part of: sequence
location: 44205..44756
location: region:44205-44756:1
so has part: feature:44205-44756:1:exon
subclass of: SO_0000010

position:44205:1
position: 44205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44756:1
position: 44756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44205-44756:1:exon

XCSCFBP4642_RS0123465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009667782.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MTVSAPEPLAAHHDIEAFDSGVDSLDQWLKRRALKNQATGASRTFVACDDGRVVAYYALASSGVTVDAAPGRFRRNMPDPIPVVVLGRLAVDQSQQGRGLGRALVKDAGQRIVQAADTIGIRGVLVHALSADAKAFYERIGFEPSPLDPMMLLVTLDDLKAGFSRHTCKNSSQDRISSIASVS
SIO_010081: XCSCFBP4642_RS0123465
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123465
location: 44205..44756
location: region:44205-44756:1
so has part: feature:44205-44756:1:exon

WP_029218400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44205-44756:1:exon

XCSCFBP4642_RS27935
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS27935
pseudo: true
so part of: sequence
location: 45239..>45628
location: region:45239-45628:1
so has part: feature:45239-45628:1:exon
subclass of: SO_0000010

position:45239:1
position: 45239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45628:1
position: 45628
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45239-45628:1:exon

XCSCFBP4642_RS27935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS27935
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113411.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: XCSCFBP4642_RS27935
subclass of: SO_0000673
so part of: XCSCFBP4642_RS27935
location: 45239..>45628
location: region:45239-45628:1
so has part: feature:45239-45628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45239-45628:1:exon

XCSCFBP4642_RS0123480
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
gene: avrXacE2
locus tag: XCSCFBP4642_RS0123480
so part of: sequence
location: complement(46276..47346)
location: region:46276-47346:-1
so has part: feature:46276-47346:-1:exon
subclass of: SO_0000010

position:46276:-1
position: 46276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47346:-1
position: 47346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46276-47346:-1:exon

XCSCFBP4642_RS0123480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
gene: avrXacE2
locus tag: XCSCFBP4642_RS0123480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052114.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector avirulence protein AvrXacE2
translation: MGCTISTTNNAPHSPRQEDAPPLPPQTRQSFVGVVNGLLSDLPKRRRRGGLLSDPDISLAGYLLSKAVIGDPVEPQDIPRLHKANNTMQETRARFPYGRGNVATDIAVSDHASSQHAQAAHDVFVDLVRGAAPASMLTNPTLGHAVVSEFVQGGHCAGYAAVATMRHVQKLQPEESVHYVQHNHQGHDWAESRVPDGHHKTIVLDPWAQGPAVFASDSRFAANAQHTQERLALNAKDGDDIAAKTAAGAQYLLENCLPLTETHLKRLKAQQFHCAPEEVWQPQPVVSDAFRRRVRQGLATLTNSSELGLSRAEQSSKALKKMSIKSACALGFGKKAASAAAEDIAAAAYQLGEQSQ
SIO_010081: XCSCFBP4642_RS0123480
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123480
location: complement(46276..47346)
location: region:46276-47346:-1
so has part: feature:46276-47346:-1:exon

WP_029218399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46276-47346:-1:exon

XCSCFBP4642_RS0123485
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123485
pseudo: true
so part of: sequence
location: complement(47367..>47753)
location: region:47367-47753:-1
so has part: feature:47367-47753:-1:exon
subclass of: SO_0000010

position:47367:-1
position: 47367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47753:-1
position: 47753
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47367-47753:-1:exon

XCSCFBP4642_RS0123485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_041182294.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: XCSCFBP4642_RS0123485
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123485
location: complement(47367..>47753)
location: region:47367-47753:-1
so has part: feature:47367-47753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47367-47753:-1:exon

XCSCFBP4642_RS30330
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30330
pseudo: true
so part of: sequence
location: complement(47910..>48206)
location: region:47910-48206:-1
so has part: feature:47910-48206:-1:exon
subclass of: SO_0000010

position:47910:-1
position: 47910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48206:-1
position: 48206
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47910-48206:-1:exon

XCSCFBP4642_RS30330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001358886.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: peptidase M66
SIO_010081: XCSCFBP4642_RS30330
subclass of: SO_0000673
so part of: XCSCFBP4642_RS30330
location: complement(47910..>48206)
location: region:47910-48206:-1
so has part: feature:47910-48206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47910-48206:-1:exon

XCSCFBP4642_RS27945
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS27945
pseudo: true
so part of: sequence
location: complement(<48285..49385)
location: region:48285-49385:-1
so has part: feature:48285-49385:-1:exon
subclass of: SO_0000010

position:48285:-1
position: 48285
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:49385:-1
position: 49385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48285-49385:-1:exon

XCSCFBP4642_RS27945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS27945
inference: COORDINATES: protein motif:HMM:NF012318.2
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: trypsin-like serine protease
SIO_010081: XCSCFBP4642_RS27945
subclass of: SO_0000673
so part of: XCSCFBP4642_RS27945
location: complement(<48285..49385)
location: region:48285-49385:-1
so has part: feature:48285-49385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48285-49385:-1:exon

XCSCFBP4642_RS25725
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25725
pseudo: true
so part of: sequence
location: complement(49712..50510)
location: region:49712-50510:-1
so has part: feature:49712-50510:-1:exon
subclass of: SO_0000010

position:49712:-1
position: 49712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50510:-1
position: 50510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49712-50510:-1:exon

XCSCFBP4642_RS25725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25725
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011037261.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS1595 family transposase
SIO_010081: XCSCFBP4642_RS25725
subclass of: SO_0000673
so part of: XCSCFBP4642_RS25725
location: complement(49712..50510)
location: region:49712-50510:-1
so has part: feature:49712-50510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49712-50510:-1:exon

XCSCFBP4642_RS25730
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25730
pseudo: true
so part of: sequence
location: complement(<50792..51499)
location: region:50792-51499:-1
so has part: feature:50792-51499:-1:exon
subclass of: SO_0000010

position:50792:-1
position: 50792
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:51499:-1
position: 51499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50792-51499:-1:exon

XCSCFBP4642_RS25730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS25730
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007971051.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family resolvase
SIO_010081: XCSCFBP4642_RS25730
subclass of: SO_0000673
so part of: XCSCFBP4642_RS25730
location: complement(<50792..51499)
location: region:50792-51499:-1
so has part: feature:50792-51499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50792-51499:-1:exon

XCSCFBP4642_RS0123500
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123500
so part of: sequence
location: 51683..52696
location: region:51683-52696:1
so has part: feature:51683-52696:1:exon
subclass of: SO_0000010

position:51683:1
position: 51683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52696:1
position: 52696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51683-52696:1:exon

XCSCFBP4642_RS0123500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157773.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MARSGLYKSDVQRARDRLRATGTHPSVDAVRVALGNTGSKTTIHRYLRELEEEEGQGVGAKMAVSDALQDLIARLAERLHSEAHTVVAQAQARFQAQLQERTQALEQARHEAGSLMTQLQRCETALQAEREAGDAARSEVARRTTELAQLEERIAGLTARLAEHDAHAKSLEHKHEHAREALEHYRTSVKDQREQEQRRHEHQVQELQVALRQANEALTAKNHDLMQLNRENGQWLERQTRLERELAQARQRADAQQRERDALRLAAAEHQALQVRWTDDLHALEGVRTELSAARTELVEERQRREHAEADTLRATVRLSTLEQLLAQLRPARPVGE
SIO_010081: XCSCFBP4642_RS0123500
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123500
location: 51683..52696
location: region:51683-52696:1
so has part: feature:51683-52696:1:exon

WP_029218405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51683-52696:1:exon

XCSCFBP4642_RS29570
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS29570
so part of: sequence
location: 53177..54028
location: region:53177-54028:1
so has part: feature:53177-54028:1:exon
subclass of: SO_0000010

position:53177:1
position: 53177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54028:1
position: 54028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53177-54028:1:exon

XCSCFBP4642_RS29570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS29570
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: type III effector
translation: MYAALACYPTRILAILPLPELLQRLCPIPRRARNAARRSEARCKRCEIKYGNQNVCINLIPRPPYIPPSSISMEFKMPKSIRSASHASSSNFDSSPQHESGLRDAAKKVYDSSVLYHGTKHPHLKSLRENGFSKSHKRDGATAGGNANMFMNLSSAAQEESANNHYLSSSKKEAKNFAMFADMDNPALLRTIGVRSSFNLISDPRTRGTAYMTGQSIPSKFVLGSKNSSPGENAQVFKKEMHAAGYEVSTEQAGALLRDVQSDSDDDNFPDPDDFIMSRLRGL
SIO_010081: XCSCFBP4642_RS29570
subclass of: SO_0000673
so part of: XCSCFBP4642_RS29570
location: 53177..54028
location: region:53177-54028:1
so has part: feature:53177-54028:1:exon

WP_167331369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53177-54028:1:exon

XCSCFBP4642_RS0123510
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123510
so part of: sequence
location: complement(54239..55162)
location: region:54239-55162:-1
so has part: feature:54239-55162:-1:exon
subclass of: SO_0000010

position:54239:-1
position: 54239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55162:-1
position: 55162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54239-55162:-1:exon

XCSCFBP4642_RS0123510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477429.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKIGYARVSTREQNPALQVDALKAAGCERIYQDVASGAKTARPALDELLGQLRAGDVLVIWKLDRMGRSLKHLVELVGNLMERKVGLLSLNDPIDTTSAQGRFVFNLFATLAEFERELIRERTQAGLTAARARGRVGGRPTGLSPQAEATALAAETLYRERKLSVAAIAQKLHLSKSTLYSYLRHRGVEIGPYKKTEQQPSSMSALESGNDAPPKVATILLTLRIENNSKFVRGKKRTIEHVESFYLDQYDATRRPNGEYELKVPYDTDEELDEAVNELLTDIASGADDRHCFSESDARMEGTDRHW
SIO_010081: XCSCFBP4642_RS0123510
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123510
location: complement(54239..55162)
location: region:54239-55162:-1
so has part: feature:54239-55162:-1:exon

WP_011795795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54239-55162:-1:exon

XCSCFBP4642_RS27955
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS27955
pseudo: true
so part of: sequence
location: 55371..>55502
location: region:55371-55502:1
so has part: feature:55371-55502:1:exon
subclass of: SO_0000010

position:55371:1
position: 55371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55502:1
position: 55502
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55371-55502:1:exon

XCSCFBP4642_RS27955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS27955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013105051.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: methionine repressor-like protein
SIO_010081: XCSCFBP4642_RS27955
subclass of: SO_0000673
so part of: XCSCFBP4642_RS27955
location: 55371..>55502
location: region:55371-55502:1
so has part: feature:55371-55502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55371-55502:1:exon

XCSCFBP4642_RS0123515
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123515
so part of: sequence
location: complement(55530..56189)
location: region:55530-56189:-1
so has part: feature:55530-56189:-1:exon
subclass of: SO_0000010

position:55530:-1
position: 55530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56189:-1
position: 56189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55530-56189:-1:exon

XCSCFBP4642_RS0123515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123515
inference: COORDINATES: protein motif:HMM:NF013700.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M23 family metallopeptidase
translation: MNVRIAALPLLFAVASAAAPALAQSCMVNVTDHELITERFGINADFRKGRTHDGFDFRAPRGSPLYVGADGVVTTRDTWRGAGNVLVIRRPNGQTMTYYHLSAFAPDAAVGKEVKAGQLIGYAGGTSASRTGGPVDDDAYSPHLHFIYAVPDAGQQRITNFSQHASRLRSVNPGQLPRDFTGNARPQAVGVGYKTDPAPFFCKAYPFKGSGEQWNREVS
SIO_010081: XCSCFBP4642_RS0123515
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123515
location: complement(55530..56189)
location: region:55530-56189:-1
so has part: feature:55530-56189:-1:exon

WP_029221900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55530-56189:-1:exon

XCSCFBP4642_RS0123520
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123520
so part of: sequence
location: complement(56186..56632)
location: region:56186-56632:-1
so has part: feature:56186-56632:-1:exon
subclass of: SO_0000010

position:56186:-1
position: 56186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56632:-1
position: 56632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56186-56632:-1:exon

XCSCFBP4642_RS0123520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154710.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKIIPPALFVLLLAAPAAAMASEPASLSDVLECTLPADKALSALERAGIPVTGQSVPVSNVAAYGVPVVRVEVFKSQSSLGVYFVIAPADRDQLIQAAKLEAWDDEGGAGFRRELAGKNRLNVSHPDDPNVEDGEALATCSMRLRGNP
SIO_010081: XCSCFBP4642_RS0123520
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123520
location: complement(56186..56632)
location: region:56186-56632:-1
so has part: feature:56186-56632:-1:exon

WP_017154710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56186-56632:-1:exon

XCSCFBP4642_RS0123525
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123525
so part of: sequence
location: complement(56629..57135)
location: region:56629-57135:-1
so has part: feature:56629-57135:-1:exon
subclass of: SO_0000010

position:56629:-1
position: 56629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57135:-1
position: 57135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56629-57135:-1:exon

XCSCFBP4642_RS0123525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154709.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYPLQPVPADVLAVLRLRCRLSARLKRGLARGLALPLALLAAVSSAHAAEPTLADALECRLPASKAESVLARHGVAVDGPAVQPGVTVYGIPAAQLEATREAGALHLYYVIPATAAQRFIDAAQMEPIGPAFVRLLLDDRNGLQAMSPTAIRQHGGPAAPILCEMRA
SIO_010081: XCSCFBP4642_RS0123525
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123525
location: complement(56629..57135)
location: region:56629-57135:-1
so has part: feature:56629-57135:-1:exon

WP_017154709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56629-57135:-1:exon

XCSCFBP4642_RS0123530
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123530
so part of: sequence
location: complement(57166..57597)
location: region:57166-57597:-1
so has part: feature:57166-57597:-1:exon
subclass of: SO_0000010

position:57166:-1
position: 57166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57597:-1
position: 57597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57166-57597:-1:exon

XCSCFBP4642_RS0123530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS0123530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHLDYERGLYEGVAAQQHQYAAGRRDGWDEAVDQMTPRYQALERERDALQQERDNIAYAANAMGVIARAMQEVIANGTRDQQMEVINRYNALCDMYLNNGVLRTEPHNDPTAQEREGDVASFFPKLAQQLNARSSHDDDYSS
SIO_010081: XCSCFBP4642_RS0123530
subclass of: SO_0000673
so part of: XCSCFBP4642_RS0123530
location: complement(57166..57597)
location: region:57166-57597:-1
so has part: feature:57166-57597:-1:exon

WP_228325773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57166-57597:-1:exon

XCSCFBP4642_RS30335
type: Gene
subclass of: SO_0000704
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30335
so part of: sequence
location: complement(57601..>59352)
location: region:57601-59352:-1
so has part: feature:57601-59352:-1:exon
subclass of: SO_0000010

position:57601:-1
position: 57601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59352:-1
position: 59352
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57601-59352:-1:exon

XCSCFBP4642_RS30335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1219375
locus tag: XCSCFBP4642_RS30335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154707.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DotA/TraY family protein
translation: ATEQVRAQAMEQKKRAAVEVMGAIDRWVITWPDDVSKPGWDSVSSAQFNAIVSEAEQKVVAGLESSIASRQGAMASGLSAYVASLTNEGWATAGGWLQKVGLVRTQLSATFSESVGSVTEPSLTGLPNSPASDMLANSVGLVADITRKAESHDDYTSGDIKPDDLTSAIPTDPMAAVNVGQIQADMDAKMSSWVNRRMEDIVDIAVGADGSDGTGGWCGTAGLIGGSLNRMKCVGDYFSATRGAAQTMKTTLLTAVTVVRVAAGVIGGTKVLGNGFEADKVVDPIWDWIKEVIIPPLAELEMRLETLAFYFGVFLPALPYAIFIMVICGWVLSVAQTLLAAPLWAVMHMTPDRTFIGSQRQGYLLLMSLFARPALAVIGLFAGILISDPLVNFASKGFFSMRGAIVTSTGTVGAISEFFTFTWWMSAFALMLLPVFYMCFGLPQVLPDKVLQWIGGGVADLGETSALGEMRTGLARASAYGRVPGKDKDKQKKLGGGGNRPLPGSGPRGDGGGSGGGGGGNQPVSGGGQGVTPRLPPPSSPGGRGQGDAGIGPAGPSAPGKGGGGRDPIVLTQSPQGAGPRKE
SIO_010081: XCSCFBP4642_RS30335
subclass of: SO_0000673
so part of: XCSCFBP4642_RS30335
location: complement(57601..>59352)
location: region:57601-59352:-1
so has part: feature:57601-59352:-1:exon

WP_029221901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57601-59352:-1:exon