Streptomyces davaonensis JCM 4913 plasmid pSDA1, complete sequence.
Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces.
Genome sequence of the bacterium Streptomyces davawensis JCM 4913 and heterologous production of the unique antibiotic roseoflavin
Submitted (30-JUL-2012) Bielefeld University, Cebitec, Universitaetsstr. 25, 33615, GERMANY
REFSEQ INFORMATION: The reference sequence is identical to\nHE971710.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 05:38:15\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 8,679\nCDSs (total) :: 8,588\nGenes (coding) :: 8,386\nCDSs (with protein) :: 8,386\nGenes (RNA) :: 91\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 3\nPseudo Genes (total) :: 202\nCDSs (without protein) :: 202\nPseudo Genes (ambiguous residues) :: 0 of 202\nPseudo Genes (frameshifted) :: 76 of 202\nPseudo Genes (incomplete) :: 153 of 202\nPseudo Genes (internal stop) :: 19 of 202\nPseudo Genes (multiple problems) :: 40 of 202\n##Genome-Annotation-Data-END##
COORDINATES: similar to AA sequence:RefSeq:WP_014668653.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011109749.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019068909.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_019074445.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677399.1
COORDINATES: similar to AA sequence:RefSeq:WP_006129974.1
COORDINATES: similar to AA sequence:RefSeq:WP_020552721.1
COORDINATES: similar to AA sequence:RefSeq:WP_020552722.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012383.2
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010354929.1
nucleotidyltransferase domain-containing protein
Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
COORDINATES: similar to AA sequence:RefSeq:WP_010354931.1
GO:0018193 - peptidyl-amino acid modification [Evidence IEA]
aspartyl/asparaginyl beta-hydroxylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011039482.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109736.1
COORDINATES: similar to AA sequence:RefSeq:WP_018523477.1
COORDINATES: similar to AA sequence:RefSeq:WP_009998280.1
COORDINATES: similar to AA sequence:RefSeq:WP_003954286.1
ATPases involved in chromosome partitioning
COORDINATES: similar to AA sequence:RefSeq:WP_011212208.1
COORDINATES: protein motif:HMM:NF020124.2
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_019074414.1
COORDINATES: similar to AA sequence:RefSeq:WP_018523460.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449455.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109717.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677511.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109715.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677509.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677508.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074400.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074399.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074396.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677502.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074390.1
COORDINATES: similar to AA sequence:RefSeq:WP_019329452.1
COORDINATES: similar to AA sequence:RefSeq:WP_007505684.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109707.1
COORDINATES: similar to AA sequence:RefSeq:WP_015449470.1
COORDINATES: similar to AA sequence:RefSeq:WP_007505690.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109704.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109703.1
COORDINATES: similar to AA sequence:RefSeq:WP_019329446.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109701.1
COORDINATES: similar to AA sequence:RefSeq:WP_007504810.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677476.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677475.1
COORDINATES: similar to AA sequence:RefSeq:WP_018569256.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109696.1
COORDINATES: similar to AA sequence:RefSeq:WP_018563321.1
COORDINATES: similar to AA sequence:RefSeq:WP_011039391.1
COORDINATES: similar to AA sequence:RefSeq:WP_011029507.1
COORDINATES: similar to AA sequence:RefSeq:WP_003979068.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677464.1
COORDINATES: protein motif:HMM:NF022019.2
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
COORDINATES: similar to AA sequence:RefSeq:WP_014677463.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677462.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109689.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074364.1
COORDINATES: similar to AA sequence:RefSeq:WP_014150750.1
COORDINATES: similar to AA sequence:RefSeq:WP_015663152.1
COORDINATES: similar to AA sequence:RefSeq:WP_015657343.1
COORDINATES: similar to AA sequence:RefSeq:WP_019328792.1
COORDINATES: protein motif:HMM:NF024734.2
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019524469.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011109680.1
COORDINATES: similar to AA sequence:RefSeq:WP_011109678.1
COORDINATES: similar to AA sequence:RefSeq:WP_011039364.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003958342.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_016828477.1
COORDINATES: similar to AA sequence:RefSeq:WP_003984059.1
COORDINATES: similar to AA sequence:RefSeq:WP_016639756.1
COORDINATES: similar to AA sequence:RefSeq:WP_007505422.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074346.1
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: similar to AA sequence:RefSeq:WP_007506608.1
COORDINATES: similar to AA sequence:RefSeq:WP_019074343.1
COORDINATES: similar to AA sequence:RefSeq:WP_018385996.1
COORDINATES: similar to AA sequence:RefSeq:WP_018385995.1
COORDINATES: similar to AA sequence:RefSeq:WP_003979091.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003979092.1
COORDINATES: similar to AA sequence:RefSeq:WP_018522997.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003963339.1