Candidatus Mycoplasma haemolamae str. Purdue, complete sequence.
Candidatus Mycoplasma haemolamae str. Purdue
Bacteria; Mycoplasmatota; Mollicutes; Mycoplasmataceae; Mycoplasma.
Genome sequence of 'Candidatus Mycoplasma haemolamae' strain purdue, a red blood cell pathogen of alpacas (Vicugna pacos) and llamas (Lama glama)
Submitted (16-JUL-2012) Comparative Pathobiology, Purdue University, 725 Harrison Street, VPRB, West Lafayette, IN 47907, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP003731.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/08/2022 02:38:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.0\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 982\nCDSs (total) :: 944\nGenes (coding) :: 941\nCDSs (with protein) :: 941\nGenes (RNA) :: 38\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 33\nncRNAs :: 2\nPseudo Genes (total) :: 3\nCDSs (without protein) :: 3\nPseudo Genes (ambiguous residues) :: 0 of 3\nPseudo Genes (frameshifted) :: 0 of 3\nPseudo Genes (incomplete) :: 2 of 3\nPseudo Genes (internal stop) :: 1 of 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF019903.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013608710.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511384.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849524.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_015511386.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608714.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849527.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:TIGR01956.2
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_014849530.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608719.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849532.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849533.1
phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014849534.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
GO:0009156 - ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511396.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511397.1
GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
signal recognition particle receptor subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015511398.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511399.1
COORDINATES: similar to AA sequence:RefSeq:WP_014582807.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849540.1
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015511402.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849542.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608731.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608732.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849968.1
COORDINATES: protein motif:HMM:TIGR00233.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849564.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511416.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608760.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511419.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511421.1
triose-phosphate isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015511422.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_015511423.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609594.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849707.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511428.1
spermidine/putrescine ABC transporter permease
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF014128.2
spermidine/putrescine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR00329.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_014849807.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511433.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608777.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609602.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849801.1
COORDINATES: similar to AA sequence:RefSeq:WP_014850034.1
COORDINATES: similar to AA sequence:RefSeq:WP_014850035.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609763.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511443.1
COORDINATES: protein motif:HMM:NF013528.2
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: similar to AA sequence:RefSeq:WP_010875022.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511450.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511451.1
COORDINATES: similar to AA sequence:RefSeq:WP_014574615.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013608943.1
COORDINATES: similar to AA sequence:RefSeq:WP_014850010.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014858903.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858924.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858904.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858540.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858583.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858901.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858902.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858917.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858919.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849762.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_013608947.1
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013608948.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511500.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511501.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511502.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609029.1
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - transcription, DNA-templated [Evidence IEA]
DNA-directed RNA polymerase subunit delta
COORDINATES: protein motif:HMM:TIGR00168.2
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511507.1
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_015511512.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849685.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511514.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511515.1
COORDINATES: protein motif:HMM:NF012832.2
GO:0004385 - guanylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013609813.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511518.1
COORDINATES: protein motif:HMM:NF021128.2
COORDINATES: similar to AA sequence:RefSeq:WP_014849676.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511522.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511523.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849672.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013205.2
COORDINATES: similar to AA sequence:RefSeq:WP_015511526.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849668.1
GO:0006364 - rRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013609803.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511529.1
NusA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015511531.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_014849663.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511534.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015511535.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_013608996.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608995.1
COORDINATES: similar to AA sequence:RefSeq:WP_013608992.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF036968.2
COORDINATES: similar to AA sequence:RefSeq:WP_015511543.1
COORDINATES: protein motif:HMM:NF013368.2
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849649.1
COORDINATES: similar to AA sequence:RefSeq:WP_015726055.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013608959.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
COORDINATES: similar to AA sequence:RefSeq:WP_014850068.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013608957.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014850066.1
GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511553.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]; GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014850064.1
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013608952.1
COORDINATES: similar to AA sequence:RefSeq:WP_014850062.1
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: similar to AA sequence:RefSeq:WP_013609838.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015511558.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_015511560.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609041.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF013122.2
COORDINATES: protein motif:HMM:NF024255.2
GO:0016429 - tRNA (adenine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (adenine(22)-N(1))-methyltransferase TrmK
COORDINATES: similar to AA sequence:RefSeq:WP_013609043.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013609841.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849821.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_014849822.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511570.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511571.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849825.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849826.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00011
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014858353.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858352.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858356.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858354.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858366.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858363.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858773.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609913.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609148.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511668.1
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849793.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849613.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511666.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849611.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511664.1
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013609140.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609906.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609137.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013609136.1
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_014849739.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858404.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858403.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858390.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849741.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858417.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858419.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858418.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609051.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511575.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849837.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609054.1
COORDINATES: protein motif:HMM:NF012782.2
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF012498.2
COORDINATES: similar to AA sequence:RefSeq:WP_014858598.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609132.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849597.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609895.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609128.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511645.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849593.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849592.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849591.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858928.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858183.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609094.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013609871.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849911.1
GO:0006812 - cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511619.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609101.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF013250.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014849914.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609878.1
COORDINATES: similar to AA sequence:RefSeq:WP_010869326.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609106.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609107.1
COORDINATES: similar to AA sequence:RefSeq:WP_011228713.1
COORDINATES: protein motif:HMM:NF013705.2
DnaJ C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015511627.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004794503.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: protein motif:HMM:NF014325.2
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013609112.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609113.1
COORDINATES: protein motif:HMM:NF012345.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849942.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849584.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription, initiation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-templated [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_014849585.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609120.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: protein motif:HMM:NF014930.2
aspartyl/glutamyl-tRNA amidotransferase subunit B
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: similar to AA sequence:RefSeq:WP_014849590.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858927.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858185.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858435.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609869.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609868.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849903.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511608.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609865.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription, elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849892.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609085.1
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_010874547.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609083.1
COORDINATES: similar to AA sequence:RefSeq:WP_005987264.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849862.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511599.1
COORDINATES: protein motif:HMM:NF012624.2
COORDINATES: similar to AA sequence:RefSeq:WP_013609855.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511596.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511595.1
COORDINATES: protein motif:HMM:NF013057.2
COORDINATES: similar to AA sequence:RefSeq:WP_014858625.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858623.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858681.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858651.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858650.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858649.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858646.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858654.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858652.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609853.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609852.1
COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849852.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511589.1
COORDINATES: similar to AA sequence:RefSeq:WP_003247583.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511587.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609063.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511585.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511584.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849844.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609059.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609058.1
COORDINATES: protein motif:HMM:NF014442.2
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF037510.2
COORDINATES: similar to AA sequence:RefSeq:WP_014858640.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858715.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858714.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609154.1
GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015624.2
COORDINATES: similar to AA sequence:RefSeq:WP_015511680.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849626.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849627.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609173.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858751.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858747.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_014849899.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858414.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858767.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858766.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858774.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858775.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511773.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_014849751.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511775.1
COORDINATES: similar to AA sequence:RefSeq:WP_013610076.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014849748.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511778.1
COORDINATES: similar to AA sequence:RefSeq:WP_013610079.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511780.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511781.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014858800.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858791.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858793.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858794.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858792.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858790.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858801.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013609368.1
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: similar to AA sequence:RefSeq:WP_013609371.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511789.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302339.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511791.1
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013610092.1
COORDINATES: similar to AA sequence:RefSeq:WP_014850027.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858841.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858834.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858860.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858838.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858839.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858847.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858859.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858844.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858828.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858840.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858849.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609418.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511873.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849723.1
COORDINATES: similar to AA sequence:RefSeq:WP_014849722.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511870.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609427.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609428.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019880.2
CHC2 zinc finger domain-containing protein
COORDINATES: protein motif:HMM:NF013495.2
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_014849716.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_014858897.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858896.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858541.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858187.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858178.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858916.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858914.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858188.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858189.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858969.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858582.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858900.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609453.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511885.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511886.1
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014850121.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013609459.1
COORDINATES: similar to AA sequence:RefSeq:WP_014850123.1
COORDINATES: similar to AA sequence:RefSeq:WP_014850124.1
GO:0016791 - phosphatase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013610170.1
COORDINATES: similar to AA sequence:RefSeq:WP_013609463.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
selenocysteine lyase/cysteine desulfurase
COORDINATES: protein motif:HMM:NF013804.2
COORDINATES: protein motif:HMM:NF012975.2
GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015511898.1
COORDINATES: similar to AA sequence:RefSeq:WP_014850131.1
COORDINATES: similar to AA sequence:RefSeq:WP_014583022.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858963.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858970.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858977.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858962.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858968.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858967.1
COORDINATES: similar to AA sequence:RefSeq:WP_014858971.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511902.1
GO:0016021 - integral component of membrane [Evidence IEA]
cysteine peptidase family C39 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013610183.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: similar to AA sequence:RefSeq:WP_015511911.1
COORDINATES: similar to AA sequence:RefSeq:WP_013610187.1
COORDINATES: protein motif:HMM:NF024674.2
COORDINATES: similar to AA sequence:RefSeq:WP_015511915.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014850157.1
COORDINATES: protein motif:HMM:TIGR02397.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014850160.1
COORDINATES: similar to AA sequence:RefSeq:WP_014850161.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014850162.1
COORDINATES: similar to AA sequence:RefSeq:WP_015511922.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014850164.1
COORDINATES: protein motif:HMM:NF015922.2
DNA gyrase C-terminal beta-propeller domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015511924.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014850166.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013610196.1
COORDINATES: protein motif:HMM:NF012616.2
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_014850169.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: similar to AA sequence:RefSeq:WP_014850170.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014584309.1