Falco rusticolus isolate bFalRus1 chromosome 21, bFalRus1.pri, whole genome shotgun sequence.
type: Entry
definition: Falco rusticolus isolate bFalRus1 chromosome 21, bFalRus1.pri, whole genome shotgun sequence.
sequence version: NC_051207.1
sequence date: 2020-11-09
sequence: sequence
division: CON
label: NC_051207.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA675116
dblink: SAMN12629496
keyword: WGS
keyword: RefSeq
source: Falco rusticolus (gyrfalcon)
organism: Falco rusticolus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM026686.1.\nAssembly name: bFalRus1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/11/03. The original whole-genome shotgun project has the\naccession JADCQO000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 20-JUL-2020\nAssembly Method :: FALCON v. falcon-2018.31.08-03.06;\n FALCON-Unzip v. 6.0.0.47841; purge_dups\n github v.\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Scaff10x v. 4.1.0; Bionano Solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Polish\n v. pbgcpp:1.9.0; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-07-20; VGP assembly\n pipeline v. 1.6\nAssembly Name :: bFalRus1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 44.28x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Falco rusticolus Annotation Release\n 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 485429
topology: linear
so has quality: SO_0000987
location: 1..485429
location: region:1-485429:1
RO_0002162: 120794

NC_051207
type: RefSeq
SIO_000068: refseq

PRJNA675116
type: BioProject
SIO_000068: bioproject

SAMN12629496
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485429:1
position: 485429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-485429:1:source
so part of: sequence
organism: Falco rusticolus
mol type: genomic DNA
isolate: bFalRus1
chromosome: 21
sex: female
tissue type: blood
dev stage: juvenile
country: Qatar
lat lon: 25.5 N 51.25 E
collection date: 11-Apr-2019
collected by: Farooq Al-Ajli, Souq Waqif Falcon Hospital

120794
type: Taxonomy
SIO_000068: taxonomy

LOC119140508
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4329..58871)
location: region:4329-58871:-1
so has part: feature:4329-58871:-1:exon
subclass of: SO_0000010

119140508
type: Gene
SIO_000068: ncbigene

position:4329:-1
position: 4329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58871:-1
position: 58871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4329-58871:-1:exon

LOC119140508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140508
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037371917.1
SIO_010081: LOC119140508
subclass of: SO_0000673
so part of: LOC119140508
location: complement(join(4329..6634,15909..17303,58689..58871))
location: region:4329-58871:-1
so has part: feature:58689-58871:-1:exon
so has part: feature:15909-17303:-1:exon
so has part: feature:4329-6634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58689-58871:-1:exon

position:58689:-1
position: 58689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15909-17303:-1:exon

position:15909:-1
position: 15909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17303:-1
position: 17303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4329-6634:-1:exon

position:6634:-1
position: 6634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119140508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140508
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037371918.1
SIO_010081: LOC119140508
subclass of: SO_0000673
so part of: LOC119140508
location: complement(join(4329..6634,15909..17303,28479..28645,58689..58871))
location: region:4329-58871:-1
so has part: feature:58689-58871:-1:exon
so has part: feature:28479-28645:-1:exon
so has part: feature:15909-17303:-1:exon
so has part: feature:4329-6634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58689-58871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28479-28645:-1:exon

position:28479:-1
position: 28479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28645:-1
position: 28645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15909-17303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4329-6634:-1:exon

LOC119140508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein isoform X1
translation: MERLVVYLLVISTAVKAMMCPKRCMCQNLSPSFTILCTKTGLLFVPPSIDRRTAELRLMDNFITTLRRKDFANMTNLIHLTLSRNTISQIMPYAFFDLKGLHALHLDSNRLTYINEDHFKGLINLRHLILSNNQLNYISPGSLDDFIETIEDLDLSYNNLVNVPWETIAKLSNVNTVSLDHNLIEFVPEGIFSNLHKLARLDMTSNKLKKIPPDPLFSRIPVYAKSKGSPLSSLVLSFGGNPLHCNCELVWLRRLTREDDLETCASPPELMGKYFWSIKEEEFVCEPPMITHRTPKLTATEGQSISLKCKAVGDPDPYVRWISPDGKLVSNTSRTVSYENGTLDILVTSLTDKGTFTCIASNAAGESTAPVELLVTPYPNLANSTNCDKDAEPGPSDILISAKSSFPNETKAQQEKAVVVAELTSSSALIQWPSQHHLPGIRMYQIQYNSSADDILVYRMIPAASKSFFLTDLVAGREYDLCVLAVYDDGLTSLTATRVIGCVQFTTQEEYKQCRSLHAQFLGGTMIIIIGGIIVASVLVFIFILLMKYKVYNNHHKNKTTKVNNVCSQTNGSQSGSMARSTSKLAERRESLHQECSGSSVKGKTVVDLDCEKVTPTNTTFLTTDALS
SIO_010081: LOC119140508
subclass of: SO_0000673
so part of: LOC119140508
location: complement(join(6124..6634,15909..17284))
location: region:6124-17284:-1
so has part: feature:15909-17284:-1:exon
so has part: feature:6124-6634:-1:exon

XP_037227814.1
type: Protein
SIO_000068: ncbiprotein

position:6124:-1
position: 6124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17284:-1
position: 17284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15909-17284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6124-6634:-1:exon

LOC119140508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein isoform X1
translation: MERLVVYLLVISTAVKAMMCPKRCMCQNLSPSFTILCTKTGLLFVPPSIDRRTAELRLMDNFITTLRRKDFANMTNLIHLTLSRNTISQIMPYAFFDLKGLHALHLDSNRLTYINEDHFKGLINLRHLILSNNQLNYISPGSLDDFIETIEDLDLSYNNLVNVPWETIAKLSNVNTVSLDHNLIEFVPEGIFSNLHKLARLDMTSNKLKKIPPDPLFSRIPVYAKSKGSPLSSLVLSFGGNPLHCNCELVWLRRLTREDDLETCASPPELMGKYFWSIKEEEFVCEPPMITHRTPKLTATEGQSISLKCKAVGDPDPYVRWISPDGKLVSNTSRTVSYENGTLDILVTSLTDKGTFTCIASNAAGESTAPVELLVTPYPNLANSTNCDKDAEPGPSDILISAKSSFPNETKAQQEKAVVVAELTSSSALIQWPSQHHLPGIRMYQIQYNSSADDILVYRMIPAASKSFFLTDLVAGREYDLCVLAVYDDGLTSLTATRVIGCVQFTTQEEYKQCRSLHAQFLGGTMIIIIGGIIVASVLVFIFILLMKYKVYNNHHKNKTTKVNNVCSQTNGSQSGSMARSTSKLAERRESLHQECSGSSVKGKTVVDLDCEKVTPTNTTFLTTDALS
SIO_010081: LOC119140508
subclass of: SO_0000673
so part of: LOC119140508
location: complement(join(6124..6634,15909..17284))
location: region:6124-17284:-1
so has part: feature:15909-17284:-1:exon
so has part: feature:6124-6634:-1:exon

XP_037227815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15909-17284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6124-6634:-1:exon

LOC119140508
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140508
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037371920.1
SIO_010081: LOC119140508
subclass of: SO_0000673
so part of: LOC119140508
location: complement(join(6474..6584,15909..17303,58689..58871))
location: region:6474-58871:-1
so has part: feature:58689-58871:-1:exon
so has part: feature:15909-17303:-1:exon
so has part: feature:6474-6584:-1:exon

position:6474:-1
position: 6474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58689-58871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15909-17303:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6474-6584:-1:exon

position:6584:-1
position: 6584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119140508
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein isoform X2
translation: MERLVVYLLVISTAVKAMMCPKRCMCQNLSPSFTILCTKTGLLFVPPSIDRRTAELRLMDNFITTLRRKDFANMTNLIHLTLSRNTISQIMPYAFFDLKGLHALHLDSNRLTYINEDHFKGLINLRHLILSNNQLNYISPGSLDDFIETIEDLDLSYNNLVNVPWETIAKLSNVNTVSLDHNLIEFVPEGIFSNLHKLARLDMTSNKLKKIPPDPLFSRIPVYAKSKGSPLSSLVLSFGGNPLHCNCELVWLRRLTREDDLETCASPPELMGKYFWSIKEEEFVCEPPMITHRTPKLTATEGQSISLKCKAVGDPDPYVRWISPDGKLVSNTSRTVSYENGTLDILVTSLTDKGTFTCIASNAAGESTAPVELLVTPYPNLANSTNCDKDAEPGPSDILISAKSSFPNETKAQQEKAVVVAELTSSSALIQWPSQHHLPGIRMYQIQYNSSADDILVYRT
SIO_010081: LOC119140508
subclass of: SO_0000673
so part of: LOC119140508
location: complement(join(6578..6584,15909..17284))
location: region:6578-17284:-1
so has part: feature:15909-17284:-1:exon
so has part: feature:6578-6584:-1:exon

XP_037227817.1
type: Protein
SIO_000068: ncbiprotein

position:6578:-1
position: 6578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15909-17284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6578-6584:-1:exon

DHX34
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: DHX34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(132036..141614)
location: region:132036-141614:-1
so has part: feature:132036-141614:-1:exon
subclass of: SO_0000010

119140518
type: Gene
SIO_000068: ncbigene

position:132036:-1
position: 132036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141614:-1
position: 141614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132036-141614:-1:exon

DHX34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: DHX34
product: DExH-box helicase 34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371939.1
SIO_010081: DHX34
subclass of: SO_0000673
so part of: DHX34
location: complement(join(132036..132453,132714..132837,132932..133108,133230..133487,133574..133680,133813..133915,134004..134171,134246..134479,134625..134726,134897..135090,135206..135380,135519..135736,135816..135918,136896..137165,138191..138595,139913..140166,141611..141614))
location: region:132036-141614:-1
so has part: feature:141611-141614:-1:exon
so has part: feature:139913-140166:-1:exon
so has part: feature:138191-138595:-1:exon
so has part: feature:136896-137165:-1:exon
so has part: feature:135816-135918:-1:exon
so has part: feature:135519-135736:-1:exon
so has part: feature:135206-135380:-1:exon
so has part: feature:134897-135090:-1:exon
so has part: feature:134625-134726:-1:exon
so has part: feature:134246-134479:-1:exon
so has part: feature:134004-134171:-1:exon
so has part: feature:133813-133915:-1:exon
so has part: feature:133574-133680:-1:exon
so has part: feature:133230-133487:-1:exon
so has part: feature:132932-133108:-1:exon
so has part: feature:132714-132837:-1:exon
so has part: feature:132036-132453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141611-141614:-1:exon

position:141611:-1
position: 141611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139913-140166:-1:exon

position:139913:-1
position: 139913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140166:-1
position: 140166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138191-138595:-1:exon

position:138191:-1
position: 138191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138595:-1
position: 138595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136896-137165:-1:exon

position:136896:-1
position: 136896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137165:-1
position: 137165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135816-135918:-1:exon

position:135816:-1
position: 135816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135918:-1
position: 135918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:135519-135736:-1:exon

position:135519:-1
position: 135519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135736:-1
position: 135736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:135206-135380:-1:exon

position:135206:-1
position: 135206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135380:-1
position: 135380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:134897-135090:-1:exon

position:134897:-1
position: 134897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135090:-1
position: 135090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:134625-134726:-1:exon

position:134625:-1
position: 134625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134726:-1
position: 134726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:134246-134479:-1:exon

position:134246:-1
position: 134246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134479:-1
position: 134479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:134004-134171:-1:exon

position:134004:-1
position: 134004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134171:-1
position: 134171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:133813-133915:-1:exon

position:133813:-1
position: 133813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133915:-1
position: 133915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:133574-133680:-1:exon

position:133574:-1
position: 133574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133680:-1
position: 133680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:133230-133487:-1:exon

position:133230:-1
position: 133230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133487:-1
position: 133487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:132932-133108:-1:exon

position:132932:-1
position: 132932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133108:-1
position: 133108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:132714-132837:-1:exon

position:132714:-1
position: 132714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132837:-1
position: 132837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:132036-132453:-1:exon

position:132453:-1
position: 132453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHX34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: DHX34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DHX34
translation: MARFGTDQFDTDRFGTDRFGTDRFDTDRFDTARFGTDRFGTDRFDTARFDTARFDTARFGTDRFDTARFGMDRFDTVRFGTDRFGTGSGNRPRGWIWSFPPGIFSPFFFLLSPSPPQVGYQIRFESSRSPATSILFLTEGLLLRQAQREPRLPAYRVVIADEVHERHLHGDFLLGVLRRLLPARPDLKLVLMSATINIRLFSGYFGRAPVLQVPGRIFPISVIYQPIPKEEGSTVGKSGKAERLDPLPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQPYAARTQRWIILPLHSTLSVAEQDKVFDVAPPGVRKCILATNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIQRVALDALVLQLKSMGLGDPRTFPFLEPPPPSSLELAVRYLKDQGALDEAEDLTPIGNLLAQLPVDVVVGKMLVLGALFDLAEPTLTVAAALSVASPFLRAAHPNPDCATARRPLESPHGDPLTLLNIFNQWVQVKSERGGSSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHQLVEETSSQPSDSYSRQSRHRERRELHRLWRSHAETEGRKRKVLRLQDGAGASSGEEEEDGGTRGKHSVDIQDVKFKLRHDVAELQAASSSTLSCSQLALLKLVLCRGLYPQLAVPDALNSGRKDSDQIFHTKSKQGVVLHPTCVFATSPELLHAKEGAGTKDPTEGLSCHHQLLAFVSLLETTKPYLVNCVRVPALHTLLLFSRSLDTNADCTRLVADGWLELTVPDADTALRLLSTALQLRSSWEKLLHQLLEGREEESGRRPSSRDVSALSRGLREFLRMEVPHRLRQLTGLEKQNLYIGPQTVAAAPRLPGLFQGMEMKPDEVKGGHRVTEFLTYNCLATDTDLYSDCLRSFWTCPHCDLHMPFTPLERMCHESACRPSEAPLEEAAESSSKPSALQRPYHCDVCQQDFTFTPTEILRHKKQHR
SIO_010081: DHX34
subclass of: SO_0000673
so part of: DHX34
location: complement(join(132320..132453,132714..132837,132932..133108,133230..133487,133574..133680,133813..133915,134004..134171,134246..134479,134625..134726,134897..135090,135206..135380,135519..135736,135816..135918,136896..137165,138191..138595,139913..140166,141611..141614))
location: region:132320-141614:-1
so has part: feature:141611-141614:-1:exon
so has part: feature:139913-140166:-1:exon
so has part: feature:138191-138595:-1:exon
so has part: feature:136896-137165:-1:exon
so has part: feature:135816-135918:-1:exon
so has part: feature:135519-135736:-1:exon
so has part: feature:135206-135380:-1:exon
so has part: feature:134897-135090:-1:exon
so has part: feature:134625-134726:-1:exon
so has part: feature:134246-134479:-1:exon
so has part: feature:134004-134171:-1:exon
so has part: feature:133813-133915:-1:exon
so has part: feature:133574-133680:-1:exon
so has part: feature:133230-133487:-1:exon
so has part: feature:132932-133108:-1:exon
so has part: feature:132714-132837:-1:exon
so has part: feature:132320-132453:-1:exon

XP_037227836.1
type: Protein
SIO_000068: ncbiprotein

position:132320:-1
position: 132320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141611-141614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139913-140166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138191-138595:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136896-137165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135816-135918:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135519-135736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135206-135380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134897-135090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134625-134726:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:134246-134479:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134004-134171:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:133813-133915:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:133574-133680:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:133230-133487:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:132932-133108:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:132714-132837:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:132320-132453:-1:exon

LOC119140519
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 143088..>146498
location: region:143088-146498:1
so has part: feature:143088-146498:1:exon
subclass of: SO_0000010

119140519
type: Gene
SIO_000068: ncbigene

position:143088:1
position: 143088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146498:1
position: 146498
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143088-146498:1:exon

LOC119140519
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140519
product: protein phosphatase 1 regulatory subunit 14A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371940.1
SIO_010081: LOC119140519
subclass of: SO_0000673
so part of: LOC119140519
location: join(143088..143138,143406..143669,145844..145924,146035..146067,146391..>146498)
location: region:143088-146498:1
so has part: feature:143088-143138:1:exon
so has part: feature:143406-143669:1:exon
so has part: feature:145844-145924:1:exon
so has part: feature:146035-146067:1:exon
so has part: feature:146391-146498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143088-143138:1:exon

position:143138:1
position: 143138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143406-143669:1:exon

position:143406:1
position: 143406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143669:1
position: 143669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145844-145924:1:exon

position:145844:1
position: 145844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145924:1
position: 145924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:146035-146067:1:exon

position:146035:1
position: 146035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146067:1
position: 146067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:146391-146498:1:exon

position:146391:1
position: 146391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119140519
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 14A-like
translation: MGAIGATGDYRGYRGYRPPAPRRRVPQRWPRTAWGGGRAGGGSPRVGASPRGGGSPCRPPPPPRSPALQRRPARVTVKYNRRELQRRLDTELWIDRRLAELYRGREGEMPDEVNIDDLLELEADEERAQRLQGILHSCTGDTEGFIQELLVQLKGLPKQQVLQRPSPEDPNPPLPVTPP
SIO_010081: LOC119140519
subclass of: SO_0000673
so part of: LOC119140519
location: join(143088..143138,143406..143669,145844..145924,146035..146067,146391..>146498)
location: region:143088-146498:1
so has part: feature:143088-143138:1:exon
so has part: feature:143406-143669:1:exon
so has part: feature:145844-145924:1:exon
so has part: feature:146035-146067:1:exon
so has part: feature:146391-146498:1:exon

XP_037227837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143088-143138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143406-143669:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145844-145924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146035-146067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:146391-146498:1:exon

ZC3H4
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: ZC3H4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(148543..166361)
location: region:148543-166361:-1
so has part: feature:148543-166361:-1:exon
subclass of: SO_0000010

119140496
type: Gene
SIO_000068: ncbigene

position:148543:-1
position: 148543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166361:-1
position: 166361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148543-166361:-1:exon

ZC3H4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: ZC3H4
product: zinc finger CCCH-type containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_037371895.1
SIO_010081: ZC3H4
subclass of: SO_0000673
so part of: ZC3H4
location: complement(join(148543..150909,151421..151672,151823..152187,152440..152798,152941..153050,153480..153591,153821..153934,154325..154470,154572..154668,154800..154948,155520..155742,155942..156052,156698..156917,165307..166361))
location: region:148543-166361:-1
so has part: feature:165307-166361:-1:exon
so has part: feature:156698-156917:-1:exon
so has part: feature:155942-156052:-1:exon
so has part: feature:155520-155742:-1:exon
so has part: feature:154800-154948:-1:exon
so has part: feature:154572-154668:-1:exon
so has part: feature:154325-154470:-1:exon
so has part: feature:153821-153934:-1:exon
so has part: feature:153480-153591:-1:exon
so has part: feature:152941-153050:-1:exon
so has part: feature:152440-152798:-1:exon
so has part: feature:151823-152187:-1:exon
so has part: feature:151421-151672:-1:exon
so has part: feature:148543-150909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165307-166361:-1:exon

position:165307:-1
position: 165307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156698-156917:-1:exon

position:156698:-1
position: 156698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156917:-1
position: 156917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155942-156052:-1:exon

position:155942:-1
position: 155942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156052:-1
position: 156052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155520-155742:-1:exon

position:155520:-1
position: 155520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155742:-1
position: 155742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:154800-154948:-1:exon

position:154800:-1
position: 154800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154948:-1
position: 154948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:154572-154668:-1:exon

position:154572:-1
position: 154572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154668:-1
position: 154668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:154325-154470:-1:exon

position:154325:-1
position: 154325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154470:-1
position: 154470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:153821-153934:-1:exon

position:153821:-1
position: 153821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153934:-1
position: 153934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:153480-153591:-1:exon

position:153480:-1
position: 153480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153591:-1
position: 153591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:152941-153050:-1:exon

position:152941:-1
position: 152941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153050:-1
position: 153050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:152440-152798:-1:exon

position:152440:-1
position: 152440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152798:-1
position: 152798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:151823-152187:-1:exon

position:151823:-1
position: 151823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152187:-1
position: 152187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:151421-151672:-1:exon

position:151421:-1
position: 151421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151672:-1
position: 151672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:148543-150909:-1:exon

position:150909:-1
position: 150909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZC3H4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: ZC3H4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 4 isoform X1
translation: MAVESPSVPPAAAASPPSPHSTPPSPSCHHHDSGSCSLPRPPPPLQHHHGPDEREDGELEEGELEDDGGEDAQDPSEPQERGRKEKGEKHHSDSDDEKAHRRMKRKRRKEREKEKRRSKKKRKSKHKRHASSSDDFSDYSEDSDFSPGEKGHRKYREYSPPYSSSHQQYPSSHGAPMPKKSYSKMESKSYGMYEDYENEEYCPYEGEEDEDLGKEDYDDFAKELNQYRRAKEGSHRGRGGRGRGRGYRGRGGRGGGMRGGRGMGRGNRGRGRGDHPEEEEELYDEEMEYCDNEEPMGDDEYDDYSKELNQYRRSKENRGRGLNRGRGRGPRGRGNKGMGRGRGRGGNRSGMGKGGGMNEDDDYYDEDMGDGGGGGNYRRNDHDKPHQQSDKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGYCARAENCPYMHGDFPCKLFHTTGNCINGDDCMFSHDPLTEETRELLDKMLADDAEAGAEDEKEVEELKKQGINPLPKPPPGVGLLPTPPRPPGPPAPTSPNGRPMPGGPPPPPPPPLPPPGPQMPPPMHEPLSPQQLQQQQEMYKKIPSLFEIVVRPTGQLAEKLGVRHPGPPPPRFPGPGGPPGPMPGPMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMPMGPGMNPGPPMGPGPPMMPYGPDDSPHAGMMPPGPPGQGFYDNFYQQQEGLEMDHGMMGDPEDYGGYEDLEGPPGEHMFPDPALDHDALCEGGPPGLPKPPGSIPDFMPSAQRALYLRIQQKQQEEEERARRLAESNKQERENEEGDTGNWYSSDEDDGGSSVTSILKTLRQQSSGRPHGEMGPPPGVSDPRLQKAQAGASGRPADPRLRDPRLSRNAELSVPSLPGDSGPTDPRLARHIPSSVPKPEAPHSGGGGQKPPLLPEEDEGERALRDKPVSIPLDALPGHSLRDPRSQLQQFSHIKMDVVLNKPNFARMILWSPEDLIPLPIPKQEFIPVPAALQAMPTLDPRLNRSQAALADPRQRGGAAPGDAGSSSGTGLPDFELLSRILKTVNAAGGPSDKPSDPRMRKAPADPRLQKSTETGISRAPKTPEPAAGGEAAPAIAPYDPRLLTAGGLSKGSGQSSVLSAISLYDPRTPSGGGGKTPEPPTEGTSKSSDPNKSSGKNKEPLFPRRSALEQPETEKASAESATDRYNSYNRPRPKTAATGAPTQETTPQPGVHNLPVPSVYGVVKQGAKSGAGSPFAGNSPARDGEQDAASLKDVFKGFDPTASPFCQ
SIO_010081: ZC3H4
subclass of: SO_0000673
so part of: ZC3H4
location: complement(join(149495..150909,151421..151672,151823..152187,152440..152798,152941..153050,153480..153591,153821..153934,154325..154470,154572..154668,154800..154948,155520..155742,155942..156052,156698..156917,165307..165467))
location: region:149495-165467:-1
so has part: feature:165307-165467:-1:exon
so has part: feature:156698-156917:-1:exon
so has part: feature:155942-156052:-1:exon
so has part: feature:155520-155742:-1:exon
so has part: feature:154800-154948:-1:exon
so has part: feature:154572-154668:-1:exon
so has part: feature:154325-154470:-1:exon
so has part: feature:153821-153934:-1:exon
so has part: feature:153480-153591:-1:exon
so has part: feature:152941-153050:-1:exon
so has part: feature:152440-152798:-1:exon
so has part: feature:151823-152187:-1:exon
so has part: feature:151421-151672:-1:exon
so has part: feature:149495-150909:-1:exon

XP_037227792.1
type: Protein
SIO_000068: ncbiprotein

position:149495:-1
position: 149495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165467:-1
position: 165467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165307-165467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156698-156917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155942-156052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155520-155742:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154800-154948:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154572-154668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154325-154470:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153821-153934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153480-153591:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152941-153050:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152440-152798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151823-152187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:151421-151672:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:149495-150909:-1:exon

ZC3H4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: ZC3H4
product: zinc finger CCCH-type containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037371896.1
SIO_010081: ZC3H4
subclass of: SO_0000673
so part of: ZC3H4
location: complement(join(149495..150909,151421..151672,151823..152187,152440..152798,152941..153050,153480..153591,153821..153934,154325..154470,154572..154668,154800..154948,155520..155742,155942..156052,156698..156917,159483..159729,165307..165420))
location: region:149495-165420:-1
so has part: feature:165307-165420:-1:exon
so has part: feature:159483-159729:-1:exon
so has part: feature:156698-156917:-1:exon
so has part: feature:155942-156052:-1:exon
so has part: feature:155520-155742:-1:exon
so has part: feature:154800-154948:-1:exon
so has part: feature:154572-154668:-1:exon
so has part: feature:154325-154470:-1:exon
so has part: feature:153821-153934:-1:exon
so has part: feature:153480-153591:-1:exon
so has part: feature:152941-153050:-1:exon
so has part: feature:152440-152798:-1:exon
so has part: feature:151823-152187:-1:exon
so has part: feature:151421-151672:-1:exon
so has part: feature:149495-150909:-1:exon

position:165420:-1
position: 165420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165307-165420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159483-159729:-1:exon

position:159483:-1
position: 159483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159729:-1
position: 159729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:156698-156917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155942-156052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:155520-155742:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154800-154948:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154572-154668:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154325-154470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153821-153934:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153480-153591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152941-153050:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:152440-152798:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:151823-152187:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:151421-151672:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:149495-150909:-1:exon

ZC3H4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: ZC3H4
product: zinc finger CCCH-type containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037371897.1
SIO_010081: ZC3H4
subclass of: SO_0000673
so part of: ZC3H4
location: complement(join(149495..150909,151421..151672,151823..152187,152440..152798,152941..153050,153480..153591,153821..153934,154325..154470,154572..154668,154800..154948,155520..155742,155942..156052,156698..156917,159483..159729,164095..164245))
location: region:149495-164245:-1
so has part: feature:164095-164245:-1:exon
so has part: feature:159483-159729:-1:exon
so has part: feature:156698-156917:-1:exon
so has part: feature:155942-156052:-1:exon
so has part: feature:155520-155742:-1:exon
so has part: feature:154800-154948:-1:exon
so has part: feature:154572-154668:-1:exon
so has part: feature:154325-154470:-1:exon
so has part: feature:153821-153934:-1:exon
so has part: feature:153480-153591:-1:exon
so has part: feature:152941-153050:-1:exon
so has part: feature:152440-152798:-1:exon
so has part: feature:151823-152187:-1:exon
so has part: feature:151421-151672:-1:exon
so has part: feature:149495-150909:-1:exon

position:164245:-1
position: 164245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164095-164245:-1:exon

position:164095:-1
position: 164095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159483-159729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156698-156917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155942-156052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:155520-155742:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154800-154948:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154572-154668:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154325-154470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153821-153934:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153480-153591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152941-153050:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:152440-152798:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:151823-152187:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:151421-151672:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:149495-150909:-1:exon

ZC3H4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: ZC3H4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 4 isoform X2
translation: MSADSGKNFPPVSVFGSTDSCLTDMASSPRTHDDCPREDGELEEGELEDDGGEDAQDPSEPQERGRKEKGEKHHSDSDDEKAHRRMKRKRRKEREKEKRRSKKKRKSKHKRHASSSDDFSDYSEDSDFSPGEKGHRKYREYSPPYSSSHQQYPSSHGAPMPKKSYSKMESKSYGMYEDYENEEYCPYEGEEDEDLGKEDYDDFAKELNQYRRAKEGSHRGRGGRGRGRGYRGRGGRGGGMRGGRGMGRGNRGRGRGDHPEEEEELYDEEMEYCDNEEPMGDDEYDDYSKELNQYRRSKENRGRGLNRGRGRGPRGRGNKGMGRGRGRGGNRSGMGKGGGMNEDDDYYDEDMGDGGGGGNYRRNDHDKPHQQSDKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGYCARAENCPYMHGDFPCKLFHTTGNCINGDDCMFSHDPLTEETRELLDKMLADDAEAGAEDEKEVEELKKQGINPLPKPPPGVGLLPTPPRPPGPPAPTSPNGRPMPGGPPPPPPPPLPPPGPQMPPPMHEPLSPQQLQQQQEMYKKIPSLFEIVVRPTGQLAEKLGVRHPGPPPPRFPGPGGPPGPMPGPMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMPMGPGMNPGPPMGPGPPMMPYGPDDSPHAGMMPPGPPGQGFYDNFYQQQEGLEMDHGMMGDPEDYGGYEDLEGPPGEHMFPDPALDHDALCEGGPPGLPKPPGSIPDFMPSAQRALYLRIQQKQQEEEERARRLAESNKQERENEEGDTGNWYSSDEDDGGSSVTSILKTLRQQSSGRPHGEMGPPPGVSDPRLQKAQAGASGRPADPRLRDPRLSRNAELSVPSLPGDSGPTDPRLARHIPSSVPKPEAPHSGGGGQKPPLLPEEDEGERALRDKPVSIPLDALPGHSLRDPRSQLQQFSHIKMDVVLNKPNFARMILWSPEDLIPLPIPKQEFIPVPAALQAMPTLDPRLNRSQAALADPRQRGGAAPGDAGSSSGTGLPDFELLSRILKTVNAAGGPSDKPSDPRMRKAPADPRLQKSTETGISRAPKTPEPAAGGEAAPAIAPYDPRLLTAGGLSKGSGQSSVLSAISLYDPRTPSGGGGKTPEPPTEGTSKSSDPNKSSGKNKEPLFPRRSALEQPETEKASAESATDRYNSYNRPRPKTAATGAPTQETTPQPGVHNLPVPSVYGVVKQGAKSGAGSPFAGNSPARDGEQDAASLKDVFKGFDPTASPFCQ
SIO_010081: ZC3H4
subclass of: SO_0000673
so part of: ZC3H4
location: complement(join(149495..150909,151421..151672,151823..152187,152440..152798,152941..153050,153480..153591,153821..153934,154325..154470,154572..154668,154800..154948,155520..155742,155942..156052,156698..156917,159483..159592))
location: region:149495-159592:-1
so has part: feature:159483-159592:-1:exon
so has part: feature:156698-156917:-1:exon
so has part: feature:155942-156052:-1:exon
so has part: feature:155520-155742:-1:exon
so has part: feature:154800-154948:-1:exon
so has part: feature:154572-154668:-1:exon
so has part: feature:154325-154470:-1:exon
so has part: feature:153821-153934:-1:exon
so has part: feature:153480-153591:-1:exon
so has part: feature:152941-153050:-1:exon
so has part: feature:152440-152798:-1:exon
so has part: feature:151823-152187:-1:exon
so has part: feature:151421-151672:-1:exon
so has part: feature:149495-150909:-1:exon

XP_037227793.1
type: Protein
SIO_000068: ncbiprotein

position:159592:-1
position: 159592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159483-159592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156698-156917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155942-156052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155520-155742:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154800-154948:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154572-154668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154325-154470:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153821-153934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153480-153591:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152941-153050:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152440-152798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151823-152187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:151421-151672:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:149495-150909:-1:exon

ZC3H4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: ZC3H4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 4 isoform X2
translation: MSADSGKNFPPVSVFGSTDSCLTDMASSPRTHDDCPREDGELEEGELEDDGGEDAQDPSEPQERGRKEKGEKHHSDSDDEKAHRRMKRKRRKEREKEKRRSKKKRKSKHKRHASSSDDFSDYSEDSDFSPGEKGHRKYREYSPPYSSSHQQYPSSHGAPMPKKSYSKMESKSYGMYEDYENEEYCPYEGEEDEDLGKEDYDDFAKELNQYRRAKEGSHRGRGGRGRGRGYRGRGGRGGGMRGGRGMGRGNRGRGRGDHPEEEEELYDEEMEYCDNEEPMGDDEYDDYSKELNQYRRSKENRGRGLNRGRGRGPRGRGNKGMGRGRGRGGNRSGMGKGGGMNEDDDYYDEDMGDGGGGGNYRRNDHDKPHQQSDKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGYCARAENCPYMHGDFPCKLFHTTGNCINGDDCMFSHDPLTEETRELLDKMLADDAEAGAEDEKEVEELKKQGINPLPKPPPGVGLLPTPPRPPGPPAPTSPNGRPMPGGPPPPPPPPLPPPGPQMPPPMHEPLSPQQLQQQQEMYKKIPSLFEIVVRPTGQLAEKLGVRHPGPPPPRFPGPGGPPGPMPGPMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMPMGPGMNPGPPMGPGPPMMPYGPDDSPHAGMMPPGPPGQGFYDNFYQQQEGLEMDHGMMGDPEDYGGYEDLEGPPGEHMFPDPALDHDALCEGGPPGLPKPPGSIPDFMPSAQRALYLRIQQKQQEEEERARRLAESNKQERENEEGDTGNWYSSDEDDGGSSVTSILKTLRQQSSGRPHGEMGPPPGVSDPRLQKAQAGASGRPADPRLRDPRLSRNAELSVPSLPGDSGPTDPRLARHIPSSVPKPEAPHSGGGGQKPPLLPEEDEGERALRDKPVSIPLDALPGHSLRDPRSQLQQFSHIKMDVVLNKPNFARMILWSPEDLIPLPIPKQEFIPVPAALQAMPTLDPRLNRSQAALADPRQRGGAAPGDAGSSSGTGLPDFELLSRILKTVNAAGGPSDKPSDPRMRKAPADPRLQKSTETGISRAPKTPEPAAGGEAAPAIAPYDPRLLTAGGLSKGSGQSSVLSAISLYDPRTPSGGGGKTPEPPTEGTSKSSDPNKSSGKNKEPLFPRRSALEQPETEKASAESATDRYNSYNRPRPKTAATGAPTQETTPQPGVHNLPVPSVYGVVKQGAKSGAGSPFAGNSPARDGEQDAASLKDVFKGFDPTASPFCQ
SIO_010081: ZC3H4
subclass of: SO_0000673
so part of: ZC3H4
location: complement(join(149495..150909,151421..151672,151823..152187,152440..152798,152941..153050,153480..153591,153821..153934,154325..154470,154572..154668,154800..154948,155520..155742,155942..156052,156698..156917,159483..159592))
location: region:149495-159592:-1
so has part: feature:159483-159592:-1:exon
so has part: feature:156698-156917:-1:exon
so has part: feature:155942-156052:-1:exon
so has part: feature:155520-155742:-1:exon
so has part: feature:154800-154948:-1:exon
so has part: feature:154572-154668:-1:exon
so has part: feature:154325-154470:-1:exon
so has part: feature:153821-153934:-1:exon
so has part: feature:153480-153591:-1:exon
so has part: feature:152941-153050:-1:exon
so has part: feature:152440-152798:-1:exon
so has part: feature:151823-152187:-1:exon
so has part: feature:151421-151672:-1:exon
so has part: feature:149495-150909:-1:exon

XP_037227794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159483-159592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156698-156917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155942-156052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155520-155742:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154800-154948:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154572-154668:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154325-154470:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153821-153934:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153480-153591:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:152941-153050:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:152440-152798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151823-152187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:151421-151672:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:149495-150909:-1:exon

LOC119140520
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(177716..186806)
location: region:177716-186806:-1
so has part: feature:177716-186806:-1:exon
subclass of: SO_0000010

119140520
type: Gene
SIO_000068: ncbigene

position:177716:-1
position: 177716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186806:-1
position: 186806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177716-186806:-1:exon

LOC119140520
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140520
product: vigilin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371941.1
SIO_010081: LOC119140520
subclass of: SO_0000673
so part of: LOC119140520
location: complement(join(177716..177940,178243..178374,178541..178627,181243..181347,181909..182016,182231..182437,183285..183500,183978..184184,185826..186041,186379..186422,186728..186806))
location: region:177716-186806:-1
so has part: feature:186728-186806:-1:exon
so has part: feature:186379-186422:-1:exon
so has part: feature:185826-186041:-1:exon
so has part: feature:183978-184184:-1:exon
so has part: feature:183285-183500:-1:exon
so has part: feature:182231-182437:-1:exon
so has part: feature:181909-182016:-1:exon
so has part: feature:181243-181347:-1:exon
so has part: feature:178541-178627:-1:exon
so has part: feature:178243-178374:-1:exon
so has part: feature:177716-177940:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186728-186806:-1:exon

position:186728:-1
position: 186728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:186379-186422:-1:exon

position:186379:-1
position: 186379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186422:-1
position: 186422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185826-186041:-1:exon

position:185826:-1
position: 185826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186041:-1
position: 186041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183978-184184:-1:exon

position:183978:-1
position: 183978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184184:-1
position: 184184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:183285-183500:-1:exon

position:183285:-1
position: 183285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183500:-1
position: 183500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:182231-182437:-1:exon

position:182231:-1
position: 182231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182437:-1
position: 182437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181909-182016:-1:exon

position:181909:-1
position: 181909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182016:-1
position: 182016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:181243-181347:-1:exon

position:181243:-1
position: 181243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181347:-1
position: 181347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:178541-178627:-1:exon

position:178541:-1
position: 178541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178627:-1
position: 178627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:178243-178374:-1:exon

position:178243:-1
position: 178243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178374:-1
position: 178374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:177716-177940:-1:exon

position:177940:-1
position: 177940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119140520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vigilin-like
translation: MSNEEFASTIPVSPPIVKRKMKPKAHKSEQVQPIKASVITQVFHVPLEERKYKGMNQFGEGEQAKICLDIMRKTGAHLELSLAKDQGLSIVVSGKAEAVTKARKQIVARLQTQASATVAIPKEHHRFVIGKKGEKLQDLKLKTATKMQIPRPDDPSNQIKISGTKEGIEKARHEILLISAEQDKRAVERLDVEKVYHPFIAGPYNKLVRELMQDTGTRINIPPPSVNKTEIVFTGEKEQLAQAVARVKKIYEEKKKKTTTLAVEVKKSQHKYVIGPKGNSLQEILEKTGVSVEIPPTDSSSETLILRGEPEKLGQALTEVYAKANSFTISSVSAPSWLHRFIIGKKGQNLAKITQQMPKVHIKFTGGEDNITLEGPTEDVHVAQEQIEAMVKELVENSFSISVPICKQFHKNIVGKGGANIKKIRKESNTKIDLPAKNSNSETVVITGKRANCEAAHHRILATQKELANSTEVEVSIPSKLHSSLIGAKGRFVRSIVEDCGGVHIHFPTKGSGSDSVIIRGPAQGVEKAKKELLHL
SIO_010081: LOC119140520
subclass of: SO_0000673
so part of: LOC119140520
location: complement(join(177731..177940,178243..178374,178541..178627,181243..181347,181909..182016,182231..182437,183285..183500,183978..184184,185826..186041,186379..186422,186728..186806))
location: region:177731-186806:-1
so has part: feature:186728-186806:-1:exon
so has part: feature:186379-186422:-1:exon
so has part: feature:185826-186041:-1:exon
so has part: feature:183978-184184:-1:exon
so has part: feature:183285-183500:-1:exon
so has part: feature:182231-182437:-1:exon
so has part: feature:181909-182016:-1:exon
so has part: feature:181243-181347:-1:exon
so has part: feature:178541-178627:-1:exon
so has part: feature:178243-178374:-1:exon
so has part: feature:177731-177940:-1:exon

XP_037227838.1
type: Protein
SIO_000068: ncbiprotein

position:177731:-1
position: 177731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186728-186806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:186379-186422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185826-186041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183978-184184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183285-183500:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182231-182437:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181909-182016:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181243-181347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:178541-178627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:178243-178374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:177731-177940:-1:exon

LOC119140482
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140482
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 187723..207148
location: region:187723-207148:1
so has part: feature:187723-207148:1:exon
subclass of: SO_0000011

119140482
type: Gene
SIO_000068: ncbigene

position:187723:1
position: 187723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207148:1
position: 207148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187723-207148:1:exon

LOC119140482
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 120794
nc RNA class: lncRNA
gene: LOC119140482
product: uncharacterized LOC119140482
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005101625.1
SIO_010081: LOC119140482
subclass of: SO_0000673
so part of: LOC119140482
location: join(187723..187803,200366..200373,207135..207148)
location: region:187723-207148:1
so has part: feature:187723-187803:1:exon
so has part: feature:200366-200373:1:exon
so has part: feature:207135-207148:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187723-187803:1:exon

position:187803:1
position: 187803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200366-200373:1:exon

position:200366:1
position: 200366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200373:1
position: 200373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:207135-207148:1:exon

position:207135:1
position: 207135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119140483
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 200694..206160
location: region:200694-206160:1
so has part: feature:200694-206160:1:exon
subclass of: SO_0000011

119140483
type: Gene
SIO_000068: ncbigene

position:200694:1
position: 200694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206160:1
position: 206160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200694-206160:1:exon

LOC119140483
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 120794
nc RNA class: lncRNA
gene: LOC119140483
product: uncharacterized LOC119140483
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005101626.1
SIO_010081: LOC119140483
subclass of: SO_0000673
so part of: LOC119140483
location: join(200694..200854,204911..204965,206037..206160)
location: region:200694-206160:1
so has part: feature:200694-200854:1:exon
so has part: feature:204911-204965:1:exon
so has part: feature:206037-206160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200694-200854:1:exon

position:200854:1
position: 200854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204911-204965:1:exon

position:204911:1
position: 204911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204965:1
position: 204965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206037-206160:1:exon

position:206037:1
position: 206037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRX
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: PRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 212333..217410
location: region:212333-217410:1
so has part: feature:212333-217410:1:exon
subclass of: SO_0000010

119140490
type: Gene
SIO_000068: ncbigene

position:212333:1
position: 212333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217410:1
position: 217410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212333-217410:1:exon

PRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PRX
product: periaxin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037371886.1
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(212333..212412,212801..212909,213011..213134,213223..213410,214718..217410)
location: region:212333-217410:1
so has part: feature:212333-212412:1:exon
so has part: feature:212801-212909:1:exon
so has part: feature:213011-213134:1:exon
so has part: feature:213223-213410:1:exon
so has part: feature:214718-217410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212333-212412:1:exon

position:212412:1
position: 212412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212801-212909:1:exon

position:212801:1
position: 212801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212909:1
position: 212909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213011-213134:1:exon

position:213011:1
position: 213011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213134:1
position: 213134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:213223-213410:1:exon

position:213223:1
position: 213223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213410:1
position: 213410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:214718-217410:1:exon

position:214718:1
position: 214718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: periaxin
translation: MTSPGGGNPPIPPMEEETELVELETAPEAGVRGITVARDRRGLYIAKAPRSLRTYQGDRLVSARIFFEGAPPEDVAQVLEGARSCKVSLCLQHRLPGTPSPLGGTRTSGEGHQGKVARLSIPILTPSKKPPLAPSTVSPAPASPVAVEFALPKLSKLVKSWSAAEPASTAASTPVLPAAEPKRPRATPSRLTVKEAAAGKTPVMELPPVKPEVSGTAVEVLAGPSTRLPAMEVAAPKVTMGLSLAGAVPPAAPQAKEPALRLPQLEVAVPALPLPAAILEPGTTITQPQISLGEGETPSNSRKGRGSPVLKTKLPSFGTATVEDKEGDAGTRGGFAGIRVPSITIAIPSTAVELVPELSVPKPELAIAGEQPRLEVKLPARRSESPPAAPARLTFLETAVPSIDIAVPRVGVGLALPAGASMAAAPGEGDATAMPDVAARFAKGLRKLSLELEPTAALPEVEIASPARLTGDMLVAGIKPKAPKFTLPRFGLSLTKLKTSSDGDRHPLVAHDTAVPTPPNFAVTSPTVALDLALGMVGATGASAKLKVPKLSLAPFGVKDEGVGGEAHPQDAGAVMKLPRFGIGRSWGDDGRSVELGSPGTPQLRVPQVGIALPAPGSRRVPSLPKLPTGSELGRGLKLPKFGGSSPDIRTGGDSKIMRRGGSAESLSIGTAGRKMLESPGTIWLKLKTKGGMGDGEVQPVTPRFTIPTVGFTVPVKQPEHPAGQKIPKPTSMPALKVPVLELAPPGMEEVEETTRKDTTPGRWSRVKLPKLGAGFAGSGLEGEGRMRMGSVKKAMLVLVKPKEKGEDNQMVDTHHHVNGEAEGKGRRWRWVPRVGFSPREPPTEPPITQPKGGKMWLPNVELSSRDAKFNQ
SIO_010081: PRX
subclass of: SO_0000673
so part of: PRX
location: join(212865..212909,213011..213134,213223..213410,214718..216979)
location: region:212865-216979:1
so has part: feature:212865-212909:1:exon
so has part: feature:213011-213134:1:exon
so has part: feature:213223-213410:1:exon
so has part: feature:214718-216979:1:exon

XP_037227783.1
type: Protein
SIO_000068: ncbiprotein

position:212865:1
position: 212865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216979:1
position: 216979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212865-212909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213011-213134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213223-213410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214718-216979:1:exon

HIPK4
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: HIPK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 217441..219886
location: region:217441-219886:1
so has part: feature:217441-219886:1:exon
subclass of: SO_0000010

119140492
type: Gene
SIO_000068: ncbigene

position:217441:1
position: 217441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219886:1
position: 219886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217441-219886:1:exon

HIPK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: HIPK4
product: homeodomain interacting protein kinase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371888.1
SIO_010081: HIPK4
subclass of: SO_0000673
so part of: HIPK4
location: 217441..219886
location: region:217441-219886:1
so has part: feature:217441-219886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217441-219886:1:exon

HIPK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: HIPK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeodomain-interacting protein kinase 4
translation: MATLVVGAKCYDIVTMVRKGTFGEVAQARQRSTGEMVAVKMVKNEGHHGQVVKNELRLLQALQEVDTEKSHIVRFLESFSDGACTYLFFESLEQNLFDFQKQNKFLPLPVRHIRTITAQVLAALVKLRELSIIHTDLKPENIMLVDHASYPFRVKLVDFGSASIFNEVRHIKAPYIQSRFYRSPEILLGLPFCEKVDMWSLGCVVAELHLGWPLFPGINEYDQVRYICSTLGLPDHELLCAAQKTQSFFQQVPHPTGSWQLKPPGNETVKPMERRKYAFSSLDQLAAVNICPVSYPRQEMLAKHCDLHGMVELVKRMLTWDSHKRIVPSAALKHPFISLQLVKSKFEATQYYKLCQEDLRASHKDTSTAEIFPGMEKGAFIPRDRRGIQKVITQMDGLSLAEPAGDRGDKSQQDIRPIPTHYSTQQQQQHHQHPQVGPTAGKLIMLGGPRGWEQRSHCEGGVVVGSMMEQNLPGRPHTSSHAKVWL
SIO_010081: HIPK4
subclass of: SO_0000673
so part of: HIPK4
location: 217782..219242
location: region:217782-219242:1
so has part: feature:217782-219242:1:exon

XP_037227785.1
type: Protein
SIO_000068: ncbiprotein

position:217782:1
position: 217782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219242:1
position: 219242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217782-219242:1:exon

PLD3
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: PLD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(220014..224424)
location: region:220014-224424:-1
so has part: feature:220014-224424:-1:exon
subclass of: SO_0000010

119140491
type: Gene
SIO_000068: ncbigene

position:220014:-1
position: 220014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224424:-1
position: 224424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220014-224424:-1:exon

PLD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PLD3
product: phospholipase D family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037371887.1
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(220014..220506,220609..220708,220784..220949,221018..221160,221245..221445,221604..221731,221814..221934,222068..222251,222333..222472,222626..222676,223023..223096,224284..224424))
location: region:220014-224424:-1
so has part: feature:224284-224424:-1:exon
so has part: feature:223023-223096:-1:exon
so has part: feature:222626-222676:-1:exon
so has part: feature:222333-222472:-1:exon
so has part: feature:222068-222251:-1:exon
so has part: feature:221814-221934:-1:exon
so has part: feature:221604-221731:-1:exon
so has part: feature:221245-221445:-1:exon
so has part: feature:221018-221160:-1:exon
so has part: feature:220784-220949:-1:exon
so has part: feature:220609-220708:-1:exon
so has part: feature:220014-220506:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224284-224424:-1:exon

position:224284:-1
position: 224284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223023-223096:-1:exon

position:223023:-1
position: 223023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223096:-1
position: 223096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222626-222676:-1:exon

position:222626:-1
position: 222626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222676:-1
position: 222676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:222333-222472:-1:exon

position:222333:-1
position: 222333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222472:-1
position: 222472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:222068-222251:-1:exon

position:222068:-1
position: 222068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222251:-1
position: 222251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:221814-221934:-1:exon

position:221814:-1
position: 221814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221934:-1
position: 221934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:221604-221731:-1:exon

position:221604:-1
position: 221604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221731:-1
position: 221731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:221245-221445:-1:exon

position:221245:-1
position: 221245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221445:-1
position: 221445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:221018-221160:-1:exon

position:221018:-1
position: 221018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221160:-1
position: 221160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:220784-220949:-1:exon

position:220784:-1
position: 220784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220949:-1
position: 220949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:220609-220708:-1:exon

position:220609:-1
position: 220609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220708:-1
position: 220708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:220014-220506:-1:exon

position:220506:-1
position: 220506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PLD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-3' exonuclease PLD3
translation: MLGEIRFAVFLPHAGMKPDSTYKQLESLEDPAEQPTHFPPKCSHGVLRFAILLTLFILIFFLFFNLHLSSALGSGADGDAGYCSDACRIVLVESIPEGMTFSEGSVLNPSTFSTWMNLLGTVTHSLDIASFYWTMTNEDTRTHELSAAQGEQILEELLQLSQRGITVRIAVSHPSAKSPLNDLQALERSGAVVRTIDMPRLTGGVLHTKFWLVDGTHLYIGSANMDWRSLTQVKELGTAVYNCSCLAKDLGKIFEAYWALGVPDASIPVPWPANYSTTYNMETPLELKLNDTDAAVYFSQSSPPALCAAGRTQDLGALLNVIDTAEDFVDVAVMSYLPTTEFSHPQRFWPAIDNHLRKAIFERRVKVRLLAGCWQHSQVTMFPFLKSLAAVADNRTRYSVEVRLFMVPTSAAQARIPYARVNHNKYMVTEKAAYIGTSNWSGDYFVRTAGSALVVNQMVKQTGAGTAAGTSTIREELQAVFERDWNSQYSVDISDAEQWENFCGFR
SIO_010081: PLD3
subclass of: SO_0000673
so part of: PLD3
location: complement(join(220292..220506,220609..220708,220784..220949,221018..221160,221245..221445,221604..221731,221814..221934,222068..222251,222333..222472,222626..222676,223023..223094))
location: region:220292-223094:-1
so has part: feature:223023-223094:-1:exon
so has part: feature:222626-222676:-1:exon
so has part: feature:222333-222472:-1:exon
so has part: feature:222068-222251:-1:exon
so has part: feature:221814-221934:-1:exon
so has part: feature:221604-221731:-1:exon
so has part: feature:221245-221445:-1:exon
so has part: feature:221018-221160:-1:exon
so has part: feature:220784-220949:-1:exon
so has part: feature:220609-220708:-1:exon
so has part: feature:220292-220506:-1:exon

XP_037227784.1
type: Protein
SIO_000068: ncbiprotein

position:220292:-1
position: 220292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223094:-1
position: 223094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223023-223094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:222626-222676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222333-222472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222068-222251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221814-221934:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221604-221731:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221245-221445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:221018-221160:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:220784-220949:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:220609-220708:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:220292-220506:-1:exon

C21H19orf47
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: C21H19orf47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 224450..230050
location: region:224450-230050:1
so has part: feature:224450-230050:1:exon
subclass of: SO_0000010

119140493
type: Gene
SIO_000068: ncbigene

position:224450:1
position: 224450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230050:1
position: 230050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224450-230050:1:exon

C21H19orf47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: C21H19orf47
product: chromosome 21 C19orf47 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_037371890.1
SIO_010081: C21H19orf47
subclass of: SO_0000673
so part of: C21H19orf47
location: join(224450..224510,224907..224975,225260..225347,225618..225732,225845..225926,226116..226242,227158..227304,227657..227727,228450..230050)
location: region:224450-230050:1
so has part: feature:224450-224510:1:exon
so has part: feature:224907-224975:1:exon
so has part: feature:225260-225347:1:exon
so has part: feature:225618-225732:1:exon
so has part: feature:225845-225926:1:exon
so has part: feature:226116-226242:1:exon
so has part: feature:227158-227304:1:exon
so has part: feature:227657-227727:1:exon
so has part: feature:228450-230050:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224450-224510:1:exon

position:224510:1
position: 224510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224907-224975:1:exon

position:224907:1
position: 224907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224975:1
position: 224975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225260-225347:1:exon

position:225260:1
position: 225260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225347:1
position: 225347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225618-225732:1:exon

position:225618:1
position: 225618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225732:1
position: 225732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:225845-225926:1:exon

position:225845:1
position: 225845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225926:1
position: 225926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:226116-226242:1:exon

position:226116:1
position: 226116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226242:1
position: 226242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:227158-227304:1:exon

position:227158:1
position: 227158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227304:1
position: 227304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:227657-227727:1:exon

position:227657:1
position: 227657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227727:1
position: 227727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:228450-230050:1:exon

position:228450:1
position: 228450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C21H19orf47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: C21H19orf47
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein C19orf47 homolog
translation: MVSVTMATSEWIQFFKEAGIPPGPAVNYAVMFVDNRIQKNMLLDLNKEIMNELGITVVGDIIAILKHAKIVYRQEMCKAATELLCPSSPNVQAELRRNASSAASRMITNSLSRDSPPAPPPXRQRPHASKISVTVSNKLAATKAGLGDMADGNPTIPVKRRRVTAEMEGKYIINMPKGTTPRTKKILEQQAAKGLQRTSVFDRLGAEAKADTTTGGKPTGVFSRLGDTLGTNRDKATDSDDDCSVLQYAGVLKKLTKPPRKESAEPTGGTVKAKATSSEAKLVTTAIQRLSQRNIATAAVKPSSKISVIGITAVPVEAQDGDVSSTKDKNDPEFRVTIKRTWGCGKVSSTSEPPGAQMDSTGTVSVFKRLGKKPD
SIO_010081: C21H19orf47
subclass of: SO_0000673
so part of: C21H19orf47
location: join(224957..224975,225260..225347,225618..225732,225845..225926,226116..226242,227158..227304,227657..227727,228450..228926)
location: region:224957-228926:1
so has part: feature:224957-224975:1:exon
so has part: feature:225260-225347:1:exon
so has part: feature:225618-225732:1:exon
so has part: feature:225845-225926:1:exon
so has part: feature:226116-226242:1:exon
so has part: feature:227158-227304:1:exon
so has part: feature:227657-227727:1:exon
so has part: feature:228450-228926:1:exon

XP_037227787.1
type: Protein
SIO_000068: ncbiprotein

position:224957:1
position: 224957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228926:1
position: 228926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224957-224975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225260-225347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225618-225732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225845-225926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226116-226242:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227158-227304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227657-227727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228450-228926:1:exon

LOC119140510
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 234026..236611
location: region:234026-236611:1
so has part: feature:234026-236611:1:exon
subclass of: SO_0000010

119140510
type: Gene
SIO_000068: ncbigene

position:234026:1
position: 234026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236611:1
position: 236611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234026-236611:1:exon

LOC119140510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140510
product: uncharacterized protein C19orf47-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_037371922.1
SIO_010081: LOC119140510
subclass of: SO_0000673
so part of: LOC119140510
location: join(234026..234208,234560..234630,235353..236611)
location: region:234026-236611:1
so has part: feature:234026-234208:1:exon
so has part: feature:234560-234630:1:exon
so has part: feature:235353-236611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234026-234208:1:exon

position:234208:1
position: 234208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234560-234630:1:exon

position:234560:1
position: 234560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234630:1
position: 234630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235353-236611:1:exon

position:235353:1
position: 235353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119140510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf47-like
translation: MADGNPTIPVKRRRVTAEMEGKYIINMPKGTTPRTKKILEQQAAKGLQRTSVFDRLGAEAKADTTTGGKPTGVFSRLGDTLGTNRDKATDSDDDCSVLQYAGVLKKLTKPPRKESAEPTGGTVKAKATSSEAKLVTTAIQRLSQRNIATAAVKPSSKISVIGITAVPVEAQDGDVSSTKDKNDPEFRVTIKRTWGCGKVSSTSEPPGAQMDSTGTVSVFKRLGKKPD
SIO_010081: LOC119140510
subclass of: SO_0000673
so part of: LOC119140510
location: join(234073..234208,234560..234630,235353..235829)
location: region:234073-235829:1
so has part: feature:234073-234208:1:exon
so has part: feature:234560-234630:1:exon
so has part: feature:235353-235829:1:exon

XP_037227819.1
type: Protein
SIO_000068: ncbiprotein

position:234073:1
position: 234073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235829:1
position: 235829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234073-234208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234560-234630:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235353-235829:1:exon

AKT2
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237330..246964
location: region:237330-246964:1
so has part: feature:237330-246964:1:exon
subclass of: SO_0000010

119140495
type: Gene
SIO_000068: ncbigene

position:237330:1
position: 237330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246964:1
position: 246964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237330-246964:1:exon

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037371892.1
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(237330..237540,239485..239715,240681..240827,241850..241978,242165..242276,242458..242611,242784..242915,243382..243447,243586..243654,244173..244295,244513..244641,244872..245086,245157..245244,245338..245440,245700..246964)
location: region:237330-246964:1
so has part: feature:237330-237540:1:exon
so has part: feature:239485-239715:1:exon
so has part: feature:240681-240827:1:exon
so has part: feature:241850-241978:1:exon
so has part: feature:242165-242276:1:exon
so has part: feature:242458-242611:1:exon
so has part: feature:242784-242915:1:exon
so has part: feature:243382-243447:1:exon
so has part: feature:243586-243654:1:exon
so has part: feature:244173-244295:1:exon
so has part: feature:244513-244641:1:exon
so has part: feature:244872-245086:1:exon
so has part: feature:245157-245244:1:exon
so has part: feature:245338-245440:1:exon
so has part: feature:245700-246964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237330-237540:1:exon

position:237540:1
position: 237540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239485-239715:1:exon

position:239485:1
position: 239485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239715:1
position: 239715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240681-240827:1:exon

position:240681:1
position: 240681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240827:1
position: 240827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:241850-241978:1:exon

position:241850:1
position: 241850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241978:1
position: 241978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:242165-242276:1:exon

position:242165:1
position: 242165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242276:1
position: 242276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:242458-242611:1:exon

position:242458:1
position: 242458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242611:1
position: 242611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:242784-242915:1:exon

position:242784:1
position: 242784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242915:1
position: 242915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:243382-243447:1:exon

position:243382:1
position: 243382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243447:1
position: 243447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:243586-243654:1:exon

position:243586:1
position: 243586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243654:1
position: 243654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:244173-244295:1:exon

position:244173:1
position: 244173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244295:1
position: 244295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:244513-244641:1:exon

position:244513:1
position: 244513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244641:1
position: 244641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:244872-245086:1:exon

position:244872:1
position: 244872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245086:1
position: 245086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:245157-245244:1:exon

position:245157:1
position: 245157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245244:1
position: 245244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:245338-245440:1:exon

position:245338:1
position: 245338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245440:1
position: 245440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:245700-246964:1:exon

position:245700:1
position: 245700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_037371891.1
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(237330..237540,240681..240827,241850..241978,242165..242276,242458..242611,242784..242915,243382..243447,243586..243654,244173..244295,244513..244641,244872..245086,245157..245244,245338..245440,245700..246964)
location: region:237330-246964:1
so has part: feature:237330-237540:1:exon
so has part: feature:240681-240827:1:exon
so has part: feature:241850-241978:1:exon
so has part: feature:242165-242276:1:exon
so has part: feature:242458-242611:1:exon
so has part: feature:242784-242915:1:exon
so has part: feature:243382-243447:1:exon
so has part: feature:243586-243654:1:exon
so has part: feature:244173-244295:1:exon
so has part: feature:244513-244641:1:exon
so has part: feature:244872-245086:1:exon
so has part: feature:245157-245244:1:exon
so has part: feature:245338-245440:1:exon
so has part: feature:245700-246964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237330-237540:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240681-240827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241850-241978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242165-242276:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242458-242611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:242784-242915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243382-243447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243586-243654:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244173-244295:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244513-244641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244872-245086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245157-245244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245338-245440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:245700-246964:1:exon

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037371894.1
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(238857..238963,240681..240827,241850..241978,242165..242276,242458..242611,242784..242915,243382..243447,243586..243654,244173..244295,244513..244641,244872..245086,245157..245244,245338..245440,245700..246964)
location: region:238857-246964:1
so has part: feature:238857-238963:1:exon
so has part: feature:240681-240827:1:exon
so has part: feature:241850-241978:1:exon
so has part: feature:242165-242276:1:exon
so has part: feature:242458-242611:1:exon
so has part: feature:242784-242915:1:exon
so has part: feature:243382-243447:1:exon
so has part: feature:243586-243654:1:exon
so has part: feature:244173-244295:1:exon
so has part: feature:244513-244641:1:exon
so has part: feature:244872-245086:1:exon
so has part: feature:245157-245244:1:exon
so has part: feature:245338-245440:1:exon
so has part: feature:245700-246964:1:exon

position:238857:1
position: 238857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238857-238963:1:exon

position:238963:1
position: 238963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240681-240827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241850-241978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242165-242276:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242458-242611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:242784-242915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243382-243447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243586-243654:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244173-244295:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244513-244641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244872-245086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245157-245244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245338-245440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:245700-246964:1:exon

AKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: AKT2
product: AKT serine/threonine kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037371893.1
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(239756..239940,240681..240827,241850..241978,242165..242276,242458..242611,242784..242915,243382..243447,243586..243654,244173..244295,244513..244641,244872..245086,245157..245244,245338..245440,245700..246964)
location: region:239756-246964:1
so has part: feature:239756-239940:1:exon
so has part: feature:240681-240827:1:exon
so has part: feature:241850-241978:1:exon
so has part: feature:242165-242276:1:exon
so has part: feature:242458-242611:1:exon
so has part: feature:242784-242915:1:exon
so has part: feature:243382-243447:1:exon
so has part: feature:243586-243654:1:exon
so has part: feature:244173-244295:1:exon
so has part: feature:244513-244641:1:exon
so has part: feature:244872-245086:1:exon
so has part: feature:245157-245244:1:exon
so has part: feature:245338-245440:1:exon
so has part: feature:245700-246964:1:exon

position:239756:1
position: 239756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239756-239940:1:exon

position:239940:1
position: 239940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240681-240827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241850-241978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242165-242276:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242458-242611:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:242784-242915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243382-243447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243586-243654:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244173-244295:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244513-244641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:244872-245086:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245157-245244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245338-245440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:245700-246964:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNMGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(240782..240827,241850..241978,242165..242276,242458..242611,242784..242915,243382..243447,243586..243654,244173..244295,244513..244641,244872..245086,245157..245244,245338..245440,245700..245779)
location: region:240782-245779:1
so has part: feature:240782-240827:1:exon
so has part: feature:241850-241978:1:exon
so has part: feature:242165-242276:1:exon
so has part: feature:242458-242611:1:exon
so has part: feature:242784-242915:1:exon
so has part: feature:243382-243447:1:exon
so has part: feature:243586-243654:1:exon
so has part: feature:244173-244295:1:exon
so has part: feature:244513-244641:1:exon
so has part: feature:244872-245086:1:exon
so has part: feature:245157-245244:1:exon
so has part: feature:245338-245440:1:exon
so has part: feature:245700-245779:1:exon

XP_037227788.1
type: Protein
SIO_000068: ncbiprotein

position:240782:1
position: 240782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245779:1
position: 245779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240782-240827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241850-241978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242165-242276:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242458-242611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242784-242915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243382-243447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243586-243654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244173-244295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244513-244641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244872-245086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245157-245244:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245338-245440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245700-245779:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNMGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(240782..240827,241850..241978,242165..242276,242458..242611,242784..242915,243382..243447,243586..243654,244173..244295,244513..244641,244872..245086,245157..245244,245338..245440,245700..245779)
location: region:240782-245779:1
so has part: feature:240782-240827:1:exon
so has part: feature:241850-241978:1:exon
so has part: feature:242165-242276:1:exon
so has part: feature:242458-242611:1:exon
so has part: feature:242784-242915:1:exon
so has part: feature:243382-243447:1:exon
so has part: feature:243586-243654:1:exon
so has part: feature:244173-244295:1:exon
so has part: feature:244513-244641:1:exon
so has part: feature:244872-245086:1:exon
so has part: feature:245157-245244:1:exon
so has part: feature:245338-245440:1:exon
so has part: feature:245700-245779:1:exon

XP_037227789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240782-240827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241850-241978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242165-242276:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242458-242611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242784-242915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243382-243447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243586-243654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244173-244295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244513-244641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244872-245086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245157-245244:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245338-245440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245700-245779:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNMGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(240782..240827,241850..241978,242165..242276,242458..242611,242784..242915,243382..243447,243586..243654,244173..244295,244513..244641,244872..245086,245157..245244,245338..245440,245700..245779)
location: region:240782-245779:1
so has part: feature:240782-240827:1:exon
so has part: feature:241850-241978:1:exon
so has part: feature:242165-242276:1:exon
so has part: feature:242458-242611:1:exon
so has part: feature:242784-242915:1:exon
so has part: feature:243382-243447:1:exon
so has part: feature:243586-243654:1:exon
so has part: feature:244173-244295:1:exon
so has part: feature:244513-244641:1:exon
so has part: feature:244872-245086:1:exon
so has part: feature:245157-245244:1:exon
so has part: feature:245338-245440:1:exon
so has part: feature:245700-245779:1:exon

XP_037227790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240782-240827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241850-241978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242165-242276:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242458-242611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242784-242915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243382-243447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243586-243654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244173-244295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244513-244641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244872-245086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245157-245244:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245338-245440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245700-245779:1:exon

AKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: AKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAC-beta serine/threonine-protein kinase
translation: MNEVLVVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKERPETSDHSFPPLNNFSVAECQLMKTERPRPNTFVIRCLQWTTVIERTFHVDSPEEREEWMRAIQTVANSLKNQEPEADTMDYKCGSPNDSTGAEEMEVAVSKTRAKATMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTNDRLCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGITDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPNDAKEVMEHRFFAPINWQDVVQKKLVPPFKPQVTSEIDTRYFDDEFTAQSITITPPDRYDNMGSLESDQRTHFPQFSYSASIRE
SIO_010081: AKT2
subclass of: SO_0000673
so part of: AKT2
location: join(240782..240827,241850..241978,242165..242276,242458..242611,242784..242915,243382..243447,243586..243654,244173..244295,244513..244641,244872..245086,245157..245244,245338..245440,245700..245779)
location: region:240782-245779:1
so has part: feature:240782-240827:1:exon
so has part: feature:241850-241978:1:exon
so has part: feature:242165-242276:1:exon
so has part: feature:242458-242611:1:exon
so has part: feature:242784-242915:1:exon
so has part: feature:243382-243447:1:exon
so has part: feature:243586-243654:1:exon
so has part: feature:244173-244295:1:exon
so has part: feature:244513-244641:1:exon
so has part: feature:244872-245086:1:exon
so has part: feature:245157-245244:1:exon
so has part: feature:245338-245440:1:exon
so has part: feature:245700-245779:1:exon

XP_037227791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240782-240827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241850-241978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242165-242276:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242458-242611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242784-242915:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243382-243447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243586-243654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244173-244295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244513-244641:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:244872-245086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245157-245244:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245338-245440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245700-245779:1:exon

QPCTL
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: QPCTL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(247122..251121)
location: region:247122-251121:-1
so has part: feature:247122-251121:-1:exon
subclass of: SO_0000010

119140521
type: Gene
SIO_000068: ncbigene

position:247122:-1
position: 247122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251121:-1
position: 251121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247122-251121:-1:exon

QPCTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: QPCTL
product: glutaminyl-peptide cyclotransferase like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371942.1
SIO_010081: QPCTL
subclass of: SO_0000673
so part of: QPCTL
location: complement(join(247122..247340,247453..247569,247765..247864,248120..248272,248744..249031,249120..249257,250003..250344,250950..251121))
location: region:247122-251121:-1
so has part: feature:250950-251121:-1:exon
so has part: feature:250003-250344:-1:exon
so has part: feature:249120-249257:-1:exon
so has part: feature:248744-249031:-1:exon
so has part: feature:248120-248272:-1:exon
so has part: feature:247765-247864:-1:exon
so has part: feature:247453-247569:-1:exon
so has part: feature:247122-247340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250950-251121:-1:exon

position:250950:-1
position: 250950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:250003-250344:-1:exon

position:250003:-1
position: 250003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250344:-1
position: 250344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:249120-249257:-1:exon

position:249120:-1
position: 249120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249257:-1
position: 249257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:248744-249031:-1:exon

position:248744:-1
position: 248744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249031:-1
position: 249031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:248120-248272:-1:exon

position:248120:-1
position: 248120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248272:-1
position: 248272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:247765-247864:-1:exon

position:247765:-1
position: 247765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247864:-1
position: 247864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:247453-247569:-1:exon

position:247453:-1
position: 247453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247569:-1
position: 247569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:247122-247340:-1:exon

position:247340:-1
position: 247340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

QPCTL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: QPCTL
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: glutaminyl-peptide cyclotransferase-like protein
translation: MEGGIPMNGGGPVEGDNPVGDDGPMQGDIPMEGDIPMKGGGPMEAAGPMDGHISPVEAPKPRPSPNQRRLRRPVATPPSTRTSYWLRPPQAPPRAMRKGAVGSRRSRVAGSGPGAGPVLVPGPGSGPGRSLCPRSRRCPRPLLPLLPLLALAAAAAIFYNAWSGGERDTGPPLPVPSEQGLRALLGHLDPTRLWVTFLRPLLRERVPGGPGSHAARQHIVGHLVALGAAWHLELDAFEAVTPRGPVTFTNVVATAATAAPRRLVLACHYDTKVLPPGLGQQVFLGATDSAVPCAILLELAAALDQPLRRAKDRGAEVTLQLLFLDGEEAFGDWSATDSLYGARHLAAQMATTRHGPHGTQLTAMSLLVLLDLLGARHPAIHSHFTRTHHWFLRLVAIEQRLRRLGLLHAAPQDQPFFRLSPAPGPVEDDHVPFLQRGVPILHLIPTPFPRVWHTLEDTEDNLHPPTVEDLCKILVTFVAEFLQL
SIO_010081: QPCTL
subclass of: SO_0000673
so part of: QPCTL
location: complement(join(247195..247340,247453..247569,247765..247864,248120..248272,248744..249031,249120..249257,250003..250344,250950..251121))
location: region:247195-251121:-1
so has part: feature:250950-251121:-1:exon
so has part: feature:250003-250344:-1:exon
so has part: feature:249120-249257:-1:exon
so has part: feature:248744-249031:-1:exon
so has part: feature:248120-248272:-1:exon
so has part: feature:247765-247864:-1:exon
so has part: feature:247453-247569:-1:exon
so has part: feature:247195-247340:-1:exon

XP_037227839.1
type: Protein
SIO_000068: ncbiprotein

position:247195:-1
position: 247195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250950-251121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250003-250344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249120-249257:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248744-249031:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248120-248272:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247765-247864:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247453-247569:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247195-247340:-1:exon

FBXO46
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: FBXO46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(251502..255007)
location: region:251502-255007:-1
so has part: feature:251502-255007:-1:exon
subclass of: SO_0000010

119140509
type: Gene
SIO_000068: ncbigene

position:251502:-1
position: 251502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255007:-1
position: 255007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251502-255007:-1:exon

FBXO46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: FBXO46
product: F-box protein 46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_037371921.1
SIO_010081: FBXO46
subclass of: SO_0000673
so part of: FBXO46
location: complement(join(251502..253503,254755..255007))
location: region:251502-255007:-1
so has part: feature:254755-255007:-1:exon
so has part: feature:251502-253503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254755-255007:-1:exon

position:254755:-1
position: 254755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:251502-253503:-1:exon

position:253503:-1
position: 253503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXO46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: FBXO46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 46
translation: MVLCATQPRLRVRPAANHNSHGALRDAAAAACPPRGEPQLPPCFALRLRGSRRKGACAGHPGSTAERRSGRARHLPGLGRGAGSPRRWHRRHRGHHRHRWHSWQCDAALMEPNAFPQLQLWCPRPFGTYSQNKPCPGPSSTKKPFSCRTPEEPAGARAPSENTPPAPADAAPVPPASAEEGRVLLDTWYVIKPGNTKEKVAFFVAHQCGGGTGGTGGTGGRASTMKVKGNWGSDSSKAKRRRRCHDPTKSKPSPAWAASGRDPTRPLPGEPATTGGTGEAADLLSVAEMVALVEQRTALALQSFPRPCGAPATPVVFVETAGSETKTPSGSDCSRVAEAVAHFESRQREHGGTRPNGLCRPGAECATAASAAAAAPGEVRIAFRISSGREPRASAGAAAEAGAVGRPNCVFMSCGTASGGNAGSRAKDKITCDLYQLISPSRDTLPNNVEFLLAAASPRGDSDGPDMAMGCGEGSATITKAEPGEGTGEGPLASARDCTSGFHVDVVVTGVVDQCVFFGKDSAKKMKEETVRLPAAAQEDPPPGQLFLLPVPEEPPAPDDAETGEELPTVPDPSLCRLYRHVSHDFLEIRFKIQRLLEPRQYMLLLPEHVMVKIFSYLPTQALAALKCSCHYFKSIIETFGVQATDSRWNRDPLYRDDPCKQCKKHYEKGDVSLCRWHPKPYHHDLPYGRSYWMCCRRPDKEAPGCRVGLHDNNWVHPAPRRDDGR
SIO_010081: FBXO46
subclass of: SO_0000673
so part of: FBXO46
location: complement(join(251552..253503,254755..254983))
location: region:251552-254983:-1
so has part: feature:254755-254983:-1:exon
so has part: feature:251552-253503:-1:exon

XP_037227818.1
type: Protein
SIO_000068: ncbiprotein

position:251552:-1
position: 251552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254983:-1
position: 254983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254755-254983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251552-253503:-1:exon

GIPR
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(255733..262202)
location: region:255733-262202:-1
so has part: feature:255733-262202:-1:exon
subclass of: SO_0000010

119140512
type: Gene
SIO_000068: ncbigene

position:255733:-1
position: 255733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262202:-1
position: 262202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255733-262202:-1:exon

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037371926.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(255733..255916,255996..256037,256655..256793,257163..257251,257362..257431,257561..257621,257700..257859,258443..258590,258668..258771,260377..260498,260566..260673,260752..260842,261246..261340,262095..262202))
location: region:255733-262202:-1
so has part: feature:262095-262202:-1:exon
so has part: feature:261246-261340:-1:exon
so has part: feature:260752-260842:-1:exon
so has part: feature:260566-260673:-1:exon
so has part: feature:260377-260498:-1:exon
so has part: feature:258668-258771:-1:exon
so has part: feature:258443-258590:-1:exon
so has part: feature:257700-257859:-1:exon
so has part: feature:257561-257621:-1:exon
so has part: feature:257362-257431:-1:exon
so has part: feature:257163-257251:-1:exon
so has part: feature:256655-256793:-1:exon
so has part: feature:255996-256037:-1:exon
so has part: feature:255733-255916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:262095-262202:-1:exon

position:262095:-1
position: 262095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261246-261340:-1:exon

position:261246:-1
position: 261246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261340:-1
position: 261340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260752-260842:-1:exon

position:260752:-1
position: 260752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260842:-1
position: 260842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:260566-260673:-1:exon

position:260566:-1
position: 260566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260673:-1
position: 260673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:260377-260498:-1:exon

position:260377:-1
position: 260377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260498:-1
position: 260498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:258668-258771:-1:exon

position:258668:-1
position: 258668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258771:-1
position: 258771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:258443-258590:-1:exon

position:258443:-1
position: 258443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258590:-1
position: 258590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:257700-257859:-1:exon

position:257700:-1
position: 257700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257859:-1
position: 257859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:257561-257621:-1:exon

position:257561:-1
position: 257561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257621:-1
position: 257621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:257362-257431:-1:exon

position:257362:-1
position: 257362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257431:-1
position: 257431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:257163-257251:-1:exon

position:257163:-1
position: 257163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257251:-1
position: 257251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:256655-256793:-1:exon

position:256655:-1
position: 256655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256793:-1
position: 256793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:255996-256037:-1:exon

position:255996:-1
position: 255996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256037:-1
position: 256037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:255733-255916:-1:exon

position:255916:-1
position: 255916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037371927.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(255733..255916,255996..256037,256655..256793,257163..257251,257362..257431,257561..257621,257700..257859,258443..258590,258668..258771,260377..260498,260566..260673,260752..260842,261246..261340,262119..262165))
location: region:255733-262165:-1
so has part: feature:262119-262165:-1:exon
so has part: feature:261246-261340:-1:exon
so has part: feature:260752-260842:-1:exon
so has part: feature:260566-260673:-1:exon
so has part: feature:260377-260498:-1:exon
so has part: feature:258668-258771:-1:exon
so has part: feature:258443-258590:-1:exon
so has part: feature:257700-257859:-1:exon
so has part: feature:257561-257621:-1:exon
so has part: feature:257362-257431:-1:exon
so has part: feature:257163-257251:-1:exon
so has part: feature:256655-256793:-1:exon
so has part: feature:255996-256037:-1:exon
so has part: feature:255733-255916:-1:exon

position:262165:-1
position: 262165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262119-262165:-1:exon

position:262119:-1
position: 262119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261246-261340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260752-260842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260566-260673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:260377-260498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258668-258771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258443-258590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257700-257859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257561-257621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257362-257431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257163-257251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256655-256793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255996-256037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255733-255916:-1:exon

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037371929.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(255733..255916,255996..256037,256655..256793,257163..257251,257362..257431,257561..257621,257700..257859,258443..258590,258668..258771,260377..260498,260566..260673,260752..260842,261246..261318,262119..262154))
location: region:255733-262154:-1
so has part: feature:262119-262154:-1:exon
so has part: feature:261246-261318:-1:exon
so has part: feature:260752-260842:-1:exon
so has part: feature:260566-260673:-1:exon
so has part: feature:260377-260498:-1:exon
so has part: feature:258668-258771:-1:exon
so has part: feature:258443-258590:-1:exon
so has part: feature:257700-257859:-1:exon
so has part: feature:257561-257621:-1:exon
so has part: feature:257362-257431:-1:exon
so has part: feature:257163-257251:-1:exon
so has part: feature:256655-256793:-1:exon
so has part: feature:255996-256037:-1:exon
so has part: feature:255733-255916:-1:exon

position:262154:-1
position: 262154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262119-262154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261246-261318:-1:exon

position:261318:-1
position: 261318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260752-260842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260566-260673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:260377-260498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258668-258771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258443-258590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257700-257859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257561-257621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257362-257431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257163-257251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256655-256793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255996-256037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255733-255916:-1:exon

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037371931.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(255733..255916,255996..256037,256655..256793,257163..257251,257362..257431,257561..257621,257700..257859,258443..258590,258668..258771,260377..260493,260566..260673,260752..260842,261246..261318,262119..262142))
location: region:255733-262142:-1
so has part: feature:262119-262142:-1:exon
so has part: feature:261246-261318:-1:exon
so has part: feature:260752-260842:-1:exon
so has part: feature:260566-260673:-1:exon
so has part: feature:260377-260493:-1:exon
so has part: feature:258668-258771:-1:exon
so has part: feature:258443-258590:-1:exon
so has part: feature:257700-257859:-1:exon
so has part: feature:257561-257621:-1:exon
so has part: feature:257362-257431:-1:exon
so has part: feature:257163-257251:-1:exon
so has part: feature:256655-256793:-1:exon
so has part: feature:255996-256037:-1:exon
so has part: feature:255733-255916:-1:exon

position:262142:-1
position: 262142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262119-262142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261246-261318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260752-260842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260566-260673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:260377-260493:-1:exon

position:260493:-1
position: 260493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:258668-258771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258443-258590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257700-257859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257561-257621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257362-257431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257163-257251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256655-256793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255996-256037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255733-255916:-1:exon

GIPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: GIPR
product: gastric inhibitory polypeptide receptor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037371930.1
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(255733..255916,255996..256037,256655..256793,257163..257251,257362..257431,257561..257621,257700..257859,258443..258590,258668..258771,260377..260493,260566..260673,260752..260842,261246..261340,262095..262108))
location: region:255733-262108:-1
so has part: feature:262095-262108:-1:exon
so has part: feature:261246-261340:-1:exon
so has part: feature:260752-260842:-1:exon
so has part: feature:260566-260673:-1:exon
so has part: feature:260377-260493:-1:exon
so has part: feature:258668-258771:-1:exon
so has part: feature:258443-258590:-1:exon
so has part: feature:257700-257859:-1:exon
so has part: feature:257561-257621:-1:exon
so has part: feature:257362-257431:-1:exon
so has part: feature:257163-257251:-1:exon
so has part: feature:256655-256793:-1:exon
so has part: feature:255996-256037:-1:exon
so has part: feature:255733-255916:-1:exon

position:262108:-1
position: 262108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262095-262108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261246-261340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260752-260842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260566-260673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:260377-260493:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258668-258771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258443-258590:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257700-257859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257561-257621:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257362-257431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257163-257251:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256655-256793:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255996-256037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:255733-255916:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X1
translation: MGHWAMPPPLLSQVLHGAEEERSAQATLAAWHQYRHACELRLHLDPPAPGPVCNRSFDMYACWGDAVPNTTVTVPCPWYLPWHHRVQGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLTFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLVGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGHGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(255755..255916,255996..256037,256655..256793,257163..257251,257362..257431,257561..257621,257700..257859,258443..258590,258668..258771,260377..260498,260566..260673,260752..260842,261246..261302))
location: region:255755-261302:-1
so has part: feature:261246-261302:-1:exon
so has part: feature:260752-260842:-1:exon
so has part: feature:260566-260673:-1:exon
so has part: feature:260377-260498:-1:exon
so has part: feature:258668-258771:-1:exon
so has part: feature:258443-258590:-1:exon
so has part: feature:257700-257859:-1:exon
so has part: feature:257561-257621:-1:exon
so has part: feature:257362-257431:-1:exon
so has part: feature:257163-257251:-1:exon
so has part: feature:256655-256793:-1:exon
so has part: feature:255996-256037:-1:exon
so has part: feature:255755-255916:-1:exon

XP_037227823.1
type: Protein
SIO_000068: ncbiprotein

position:255755:-1
position: 255755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261302:-1
position: 261302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261246-261302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260752-260842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260566-260673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260377-260498:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258668-258771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258443-258590:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257700-257859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257561-257621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257362-257431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257163-257251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256655-256793:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255996-256037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255755-255916:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X1
translation: MGHWAMPPPLLSQVLHGAEEERSAQATLAAWHQYRHACELRLHLDPPAPGPVCNRSFDMYACWGDAVPNTTVTVPCPWYLPWHHRVQGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLTFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLVGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGHGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(255755..255916,255996..256037,256655..256793,257163..257251,257362..257431,257561..257621,257700..257859,258443..258590,258668..258771,260377..260498,260566..260673,260752..260842,261246..261302))
location: region:255755-261302:-1
so has part: feature:261246-261302:-1:exon
so has part: feature:260752-260842:-1:exon
so has part: feature:260566-260673:-1:exon
so has part: feature:260377-260498:-1:exon
so has part: feature:258668-258771:-1:exon
so has part: feature:258443-258590:-1:exon
so has part: feature:257700-257859:-1:exon
so has part: feature:257561-257621:-1:exon
so has part: feature:257362-257431:-1:exon
so has part: feature:257163-257251:-1:exon
so has part: feature:256655-256793:-1:exon
so has part: feature:255996-256037:-1:exon
so has part: feature:255755-255916:-1:exon

XP_037227824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261246-261302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260752-260842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260566-260673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260377-260498:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258668-258771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258443-258590:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257700-257859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257561-257621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257362-257431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257163-257251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256655-256793:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255996-256037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255755-255916:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X1
translation: MGHWAMPPPLLSQVLHGAEEERSAQATLAAWHQYRHACELRLHLDPPAPGPVCNRSFDMYACWGDAVPNTTVTVPCPWYLPWHHRVQGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLTFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLVGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGHGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(255755..255916,255996..256037,256655..256793,257163..257251,257362..257431,257561..257621,257700..257859,258443..258590,258668..258771,260377..260498,260566..260673,260752..260842,261246..261302))
location: region:255755-261302:-1
so has part: feature:261246-261302:-1:exon
so has part: feature:260752-260842:-1:exon
so has part: feature:260566-260673:-1:exon
so has part: feature:260377-260498:-1:exon
so has part: feature:258668-258771:-1:exon
so has part: feature:258443-258590:-1:exon
so has part: feature:257700-257859:-1:exon
so has part: feature:257561-257621:-1:exon
so has part: feature:257362-257431:-1:exon
so has part: feature:257163-257251:-1:exon
so has part: feature:256655-256793:-1:exon
so has part: feature:255996-256037:-1:exon
so has part: feature:255755-255916:-1:exon

XP_037227826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261246-261302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260752-260842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260566-260673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260377-260498:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258668-258771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258443-258590:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257700-257859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257561-257621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257362-257431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257163-257251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256655-256793:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255996-256037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255755-255916:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X2
translation: MGQRRSAQLRQRWPLGTSTGTPANSACTSTPQHPDLFATAASTCTPAGGMQSPTPPSLSPAPGTCPGTTEGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLTFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLVGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGHGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(255755..255916,255996..256037,256655..256793,257163..257251,257362..257431,257561..257621,257700..257859,258443..258590,258668..258771,260377..260493,260566..260673,260752..260842,261246..261256))
location: region:255755-261256:-1
so has part: feature:261246-261256:-1:exon
so has part: feature:260752-260842:-1:exon
so has part: feature:260566-260673:-1:exon
so has part: feature:260377-260493:-1:exon
so has part: feature:258668-258771:-1:exon
so has part: feature:258443-258590:-1:exon
so has part: feature:257700-257859:-1:exon
so has part: feature:257561-257621:-1:exon
so has part: feature:257362-257431:-1:exon
so has part: feature:257163-257251:-1:exon
so has part: feature:256655-256793:-1:exon
so has part: feature:255996-256037:-1:exon
so has part: feature:255755-255916:-1:exon

XP_037227827.1
type: Protein
SIO_000068: ncbiprotein

position:261256:-1
position: 261256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261246-261256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260752-260842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260566-260673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260377-260493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258668-258771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258443-258590:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257700-257859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257561-257621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257362-257431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257163-257251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256655-256793:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255996-256037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255755-255916:-1:exon

GIPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: GIPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide receptor isoform X2
translation: MGQRRSAQLRQRWPLGTSTGTPANSACTSTPQHPDLFATAASTCTPAGGMQSPTPPSLSPAPGTCPGTTEGGVVARRCGPDGRWVLDETGRPWRDHSQCQDPAQEQPLQRQAWLLEQFRLLYTVGYSLSLVALLLALLLLLTFRRLHCTRNFIHANLFLSFVLRAGAILTRDALLRRRLRPGPAHPLQLVGQEAVASCRLAQVVTQYCVGANYGWLLAEGLFLHKLLVLVAFSGRRCLPAFLLLGWGAPVLFVVPWVVARYLYENEGCWERNEKVAVWWIIRCPILVAVAVNFMVFVRIVRILVAKVRAHQVSQGDTRVRLARSTLTLIPLLGVHEVAFALLGEGHGGGTLRLVRLCLQLLLSSSQGLVVSVLYCFVNKEVQAEVRRGWQRCRLGAPGSPRAPPRGTRRYVAVGGQHPAPHPPRGPPMAETCC
SIO_010081: GIPR
subclass of: SO_0000673
so part of: GIPR
location: complement(join(255755..255916,255996..256037,256655..256793,257163..257251,257362..257431,257561..257621,257700..257859,258443..258590,258668..258771,260377..260493,260566..260673,260752..260842,261246..261256))
location: region:255755-261256:-1
so has part: feature:261246-261256:-1:exon
so has part: feature:260752-260842:-1:exon
so has part: feature:260566-260673:-1:exon
so has part: feature:260377-260493:-1:exon
so has part: feature:258668-258771:-1:exon
so has part: feature:258443-258590:-1:exon
so has part: feature:257700-257859:-1:exon
so has part: feature:257561-257621:-1:exon
so has part: feature:257362-257431:-1:exon
so has part: feature:257163-257251:-1:exon
so has part: feature:256655-256793:-1:exon
so has part: feature:255996-256037:-1:exon
so has part: feature:255755-255916:-1:exon

XP_037227828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261246-261256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260752-260842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260566-260673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260377-260493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258668-258771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258443-258590:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257700-257859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257561-257621:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257362-257431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257163-257251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256655-256793:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255996-256037:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255755-255916:-1:exon

OPA3
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: OPA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 263352..264195
location: region:263352-264195:1
so has part: feature:263352-264195:1:exon
subclass of: SO_0000010

119140513
type: Gene
SIO_000068: ncbigene

position:263352:1
position: 263352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264195:1
position: 264195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263352-264195:1:exon

OPA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: OPA3
product: outer mitochondrial membrane lipid metabolism regulator OPA3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_037371932.1
SIO_010081: OPA3
subclass of: SO_0000673
so part of: OPA3
location: join(263352..263551,263680..264195)
location: region:263352-264195:1
so has part: feature:263352-263551:1:exon
so has part: feature:263680-264195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263352-263551:1:exon

position:263551:1
position: 263551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263680-264195:1:exon

position:263680:1
position: 263680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OPA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: OPA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: optic atrophy 3 protein
translation: MVAGAFPLAKLLTLGARQLSRPLAARIKAGARASPFFRTYICLPPAQLYHWVEMRAKMRLMGFRGAAVKPLNEEAAAELGAELLGEAIVFGVGGLCLYLEYARQAGQTRRREGEQAAALRELREGLEGLRAELEAMAARLPPGPGGLGHAPANLNHAHAGLNHAGANPAPAGANHAPAECSCAPAGASHAPAASSHAPVGTNHASTDPGY
SIO_010081: OPA3
subclass of: SO_0000673
so part of: OPA3
location: join(263410..263551,263680..264170)
location: region:263410-264170:1
so has part: feature:263410-263551:1:exon
so has part: feature:263680-264170:1:exon

XP_037227829.1
type: Protein
SIO_000068: ncbiprotein

position:263410:1
position: 263410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264170:1
position: 264170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263410-263551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263680-264170:1:exon

LOC119140505
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(265852..271144)
location: region:265852-271144:-1
so has part: feature:265852-271144:-1:exon
subclass of: SO_0000010

119140505
type: Gene
SIO_000068: ncbigene

position:265852:-1
position: 265852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271144:-1
position: 271144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265852-271144:-1:exon

LOC119140505
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140505
product: vasodilator stimulated phosphoprotein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_037371913.1
SIO_010081: LOC119140505
subclass of: SO_0000673
so part of: LOC119140505
location: complement(join(265852..266288,266382..266439,266523..266601,266879..266924,267095..267137,267361..267421,267527..267636,267719..267936,268061..268101,268210..268273,268367..268535,268956..269127,270925..271144))
location: region:265852-271144:-1
so has part: feature:270925-271144:-1:exon
so has part: feature:268956-269127:-1:exon
so has part: feature:268367-268535:-1:exon
so has part: feature:268210-268273:-1:exon
so has part: feature:268061-268101:-1:exon
so has part: feature:267719-267936:-1:exon
so has part: feature:267527-267636:-1:exon
so has part: feature:267361-267421:-1:exon
so has part: feature:267095-267137:-1:exon
so has part: feature:266879-266924:-1:exon
so has part: feature:266523-266601:-1:exon
so has part: feature:266382-266439:-1:exon
so has part: feature:265852-266288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270925-271144:-1:exon

position:270925:-1
position: 270925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268956-269127:-1:exon

position:268956:-1
position: 268956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269127:-1
position: 269127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268367-268535:-1:exon

position:268367:-1
position: 268367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268535:-1
position: 268535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:268210-268273:-1:exon

position:268210:-1
position: 268210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268273:-1
position: 268273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268061-268101:-1:exon

position:268061:-1
position: 268061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268101:-1
position: 268101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:267719-267936:-1:exon

position:267719:-1
position: 267719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267936:-1
position: 267936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:267527-267636:-1:exon

position:267527:-1
position: 267527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267636:-1
position: 267636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:267361-267421:-1:exon

position:267361:-1
position: 267361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267421:-1
position: 267421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:267095-267137:-1:exon

position:267095:-1
position: 267095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267137:-1
position: 267137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:266879-266924:-1:exon

position:266879:-1
position: 266879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266924:-1
position: 266924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:266523-266601:-1:exon

position:266523:-1
position: 266523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266601:-1
position: 266601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:266382-266439:-1:exon

position:266382:-1
position: 266382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266439:-1
position: 266439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:265852-266288:-1:exon

position:266288:-1
position: 266288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119140505
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140505
product: vasodilator stimulated phosphoprotein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_037371912.1
SIO_010081: LOC119140505
subclass of: SO_0000673
so part of: LOC119140505
location: complement(join(265852..266288,266382..266439,266523..266601,266879..266924,267095..267137,267361..267421,267527..267636,267719..267936,268061..268101,268210..268273,268367..268535,268956..269127,270259..270324,270925..271144))
location: region:265852-271144:-1
so has part: feature:270925-271144:-1:exon
so has part: feature:270259-270324:-1:exon
so has part: feature:268956-269127:-1:exon
so has part: feature:268367-268535:-1:exon
so has part: feature:268210-268273:-1:exon
so has part: feature:268061-268101:-1:exon
so has part: feature:267719-267936:-1:exon
so has part: feature:267527-267636:-1:exon
so has part: feature:267361-267421:-1:exon
so has part: feature:267095-267137:-1:exon
so has part: feature:266879-266924:-1:exon
so has part: feature:266523-266601:-1:exon
so has part: feature:266382-266439:-1:exon
so has part: feature:265852-266288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270925-271144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270259-270324:-1:exon

position:270259:-1
position: 270259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270324:-1
position: 270324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268956-269127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268367-268535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268210-268273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268061-268101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267719-267936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267527-267636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267361-267421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267095-267137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266879-266924:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266523-266601:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:266382-266439:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265852-266288:-1:exon

LOC119140505
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140505
product: vasodilator stimulated phosphoprotein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037371911.1
SIO_010081: LOC119140505
subclass of: SO_0000673
so part of: LOC119140505
location: complement(join(265852..266288,266382..266439,266523..266601,266879..266924,267095..267137,267361..267421,267527..267636,267719..267936,268061..268101,268210..268273,268367..268478,268956..269127,270181..270324,270925..271144))
location: region:265852-271144:-1
so has part: feature:270925-271144:-1:exon
so has part: feature:270181-270324:-1:exon
so has part: feature:268956-269127:-1:exon
so has part: feature:268367-268478:-1:exon
so has part: feature:268210-268273:-1:exon
so has part: feature:268061-268101:-1:exon
so has part: feature:267719-267936:-1:exon
so has part: feature:267527-267636:-1:exon
so has part: feature:267361-267421:-1:exon
so has part: feature:267095-267137:-1:exon
so has part: feature:266879-266924:-1:exon
so has part: feature:266523-266601:-1:exon
so has part: feature:266382-266439:-1:exon
so has part: feature:265852-266288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270925-271144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270181-270324:-1:exon

position:270181:-1
position: 270181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268956-269127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268367-268478:-1:exon

position:268478:-1
position: 268478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268210-268273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268061-268101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267719-267936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267527-267636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267361-267421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267095-267137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266879-266924:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266523-266601:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:266382-266439:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265852-266288:-1:exon

LOC119140505
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140505
product: vasodilator stimulated phosphoprotein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_037371910.1
SIO_010081: LOC119140505
subclass of: SO_0000673
so part of: LOC119140505
location: complement(join(265852..266288,266382..266439,266523..266601,266879..266924,267095..267137,267361..267421,267527..267636,267719..267936,268061..268101,268210..268273,268367..268535,268956..269127,270181..270324,270925..271144))
location: region:265852-271144:-1
so has part: feature:270925-271144:-1:exon
so has part: feature:270181-270324:-1:exon
so has part: feature:268956-269127:-1:exon
so has part: feature:268367-268535:-1:exon
so has part: feature:268210-268273:-1:exon
so has part: feature:268061-268101:-1:exon
so has part: feature:267719-267936:-1:exon
so has part: feature:267527-267636:-1:exon
so has part: feature:267361-267421:-1:exon
so has part: feature:267095-267137:-1:exon
so has part: feature:266879-266924:-1:exon
so has part: feature:266523-266601:-1:exon
so has part: feature:266382-266439:-1:exon
so has part: feature:265852-266288:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270925-271144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270181-270324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268956-269127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268367-268535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268210-268273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268061-268101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267719-267936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267527-267636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267361-267421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267095-267137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266879-266924:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266523-266601:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:266382-266439:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265852-266288:-1:exon

LOC119140505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vasodilator-stimulated phosphoprotein isoform X4
translation: MGGVAAGRDRPVPPPRRHRKGRDRPQCLAAATSMSETVLCSARASVLLYDDTHKQWVAAGGGPQTLSCVQLYHHPGTNAFRLVGRKMQPDQQVVLNCPLGRGLRYSQATPQFHQWREARRVWGLSFGAPREAALFAAAVLRALRALEEGTPLSWPDPDGSASEEPEQQERHVLEDPERRVAPAGTQAMPTGGPPPPPGPPPPPGPPPPPGPPPATGVPPAPPLPPAAAGGAAGGGPGGVSGFAAAIAGAKLRKVSKDEAPGAGAPPAPPKGDGARGGGGGGLMEEMSAMLARRRKATLHGDKPVPKKDDDITSDEVEPGTRTPGQPVEPVRRPWEKASSTLPRMKSAIPAAPADPPSPADEPDLERMKQELLEEVRRELQKMKEEIIEAFVVELRKRSAP
SIO_010081: LOC119140505
subclass of: SO_0000673
so part of: LOC119140505
location: complement(join(266251..266288,266382..266439,266523..266601,266879..266924,267095..267137,267361..267421,267527..267636,267719..267936,268061..268101,268210..268273,268367..268535,268956..269127,270925..271028))
location: region:266251-271028:-1
so has part: feature:270925-271028:-1:exon
so has part: feature:268956-269127:-1:exon
so has part: feature:268367-268535:-1:exon
so has part: feature:268210-268273:-1:exon
so has part: feature:268061-268101:-1:exon
so has part: feature:267719-267936:-1:exon
so has part: feature:267527-267636:-1:exon
so has part: feature:267361-267421:-1:exon
so has part: feature:267095-267137:-1:exon
so has part: feature:266879-266924:-1:exon
so has part: feature:266523-266601:-1:exon
so has part: feature:266382-266439:-1:exon
so has part: feature:266251-266288:-1:exon

XP_037227810.1
type: Protein
SIO_000068: ncbiprotein

position:266251:-1
position: 266251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271028:-1
position: 271028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270925-271028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268956-269127:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268367-268535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268210-268273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268061-268101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267719-267936:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267527-267636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267361-267421:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267095-267137:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266879-266924:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266523-266601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266382-266439:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:266251-266288:-1:exon

LOC119140505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vasodilator-stimulated phosphoprotein isoform X3
translation: MGGVAAGRDRPVPPPRRHRKGRDRPQCLAAATSMRSWPWEFALGRTEVTGTGEHRERETVLCSARASVLLYDDTHKQWVAAGGGPQTLSCVQLYHHPGTNAFRLVGRKMQPDQQVVLNCPLGRGLRYSQATPQFHQWREARRVWGLSFGAPREAALFAAAVLRALRALEEGTPLSWPDPDGSASEEPEQQERHVLEDPERRVAPAGTQAMPTGGPPPPPGPPPPPGPPPPPGPPPATGVPPAPPLPPAAAGGAAGGGPGGVSGFAAAIAGAKLRKVSKDEAPGAGAPPAPPKGDGARGGGGGGLMEEMSAMLARRRKATLHGDKPVPKKDDDITSDEVEPGTRTPGQPVEPVRRPWEKASSTLPRMKSAIPAAPADPPSPADEPDLERMKQELLEEVRRELQKMKEEIIEAFVVELRKRSAP
SIO_010081: LOC119140505
subclass of: SO_0000673
so part of: LOC119140505
location: complement(join(266251..266288,266382..266439,266523..266601,266879..266924,267095..267137,267361..267421,267527..267636,267719..267936,268061..268101,268210..268273,268367..268535,268956..269127,270259..270324,270925..271028))
location: region:266251-271028:-1
so has part: feature:270925-271028:-1:exon
so has part: feature:270259-270324:-1:exon
so has part: feature:268956-269127:-1:exon
so has part: feature:268367-268535:-1:exon
so has part: feature:268210-268273:-1:exon
so has part: feature:268061-268101:-1:exon
so has part: feature:267719-267936:-1:exon
so has part: feature:267527-267636:-1:exon
so has part: feature:267361-267421:-1:exon
so has part: feature:267095-267137:-1:exon
so has part: feature:266879-266924:-1:exon
so has part: feature:266523-266601:-1:exon
so has part: feature:266382-266439:-1:exon
so has part: feature:266251-266288:-1:exon

XP_037227809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270925-271028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270259-270324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268956-269127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268367-268535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268210-268273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268061-268101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267719-267936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267527-267636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267361-267421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267095-267137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266879-266924:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266523-266601:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:266382-266439:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:266251-266288:-1:exon

LOC119140505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vasodilator-stimulated phosphoprotein isoform X2
translation: MGGVAAGRDRPVPPPRRHRKGRDRPQCLAAATSMRSWPWEFALGRTEVTGTGEHRERYCGHWELVSGALGSTSTGGTVTIWNCETVLCSARASVLLYDDTHKQWVAAGGGPQTLSCVQLYHHPGTNAFRLVGRKMQPDQQFHQWREARRVWGLSFGAPREAALFAAAVLRALRALEEGTPLSWPDPDGSASEEPEQQERHVLEDPERRVAPAGTQAMPTGGPPPPPGPPPPPGPPPPPGPPPATGVPPAPPLPPAAAGGAAGGGPGGVSGFAAAIAGAKLRKVSKDEAPGAGAPPAPPKGDGARGGGGGGLMEEMSAMLARRRKATLHGDKPVPKKDDDITSDEVEPGTRTPGQPVEPVRRPWEKASSTLPRMKSAIPAAPADPPSPADEPDLERMKQELLEEVRRELQKMKEEIIEAFVVELRKRSAP
SIO_010081: LOC119140505
subclass of: SO_0000673
so part of: LOC119140505
location: complement(join(266251..266288,266382..266439,266523..266601,266879..266924,267095..267137,267361..267421,267527..267636,267719..267936,268061..268101,268210..268273,268367..268478,268956..269127,270181..270324,270925..271028))
location: region:266251-271028:-1
so has part: feature:270925-271028:-1:exon
so has part: feature:270181-270324:-1:exon
so has part: feature:268956-269127:-1:exon
so has part: feature:268367-268478:-1:exon
so has part: feature:268210-268273:-1:exon
so has part: feature:268061-268101:-1:exon
so has part: feature:267719-267936:-1:exon
so has part: feature:267527-267636:-1:exon
so has part: feature:267361-267421:-1:exon
so has part: feature:267095-267137:-1:exon
so has part: feature:266879-266924:-1:exon
so has part: feature:266523-266601:-1:exon
so has part: feature:266382-266439:-1:exon
so has part: feature:266251-266288:-1:exon

XP_037227808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270925-271028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270181-270324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268956-269127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268367-268478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268210-268273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268061-268101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267719-267936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267527-267636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267361-267421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267095-267137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266879-266924:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266523-266601:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:266382-266439:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:266251-266288:-1:exon

LOC119140505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140505
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vasodilator-stimulated phosphoprotein isoform X1
translation: MGGVAAGRDRPVPPPRRHRKGRDRPQCLAAATSMRSWPWEFALGRTEVTGTGEHRERYCGHWELVSGALGSTSTGGTVTIWNCETVLCSARASVLLYDDTHKQWVAAGGGPQTLSCVQLYHHPGTNAFRLVGRKMQPDQQVVLNCPLGRGLRYSQATPQFHQWREARRVWGLSFGAPREAALFAAAVLRALRALEEGTPLSWPDPDGSASEEPEQQERHVLEDPERRVAPAGTQAMPTGGPPPPPGPPPPPGPPPPPGPPPATGVPPAPPLPPAAAGGAAGGGPGGVSGFAAAIAGAKLRKVSKDEAPGAGAPPAPPKGDGARGGGGGGLMEEMSAMLARRRKATLHGDKPVPKKDDDITSDEVEPGTRTPGQPVEPVRRPWEKASSTLPRMKSAIPAAPADPPSPADEPDLERMKQELLEEVRRELQKMKEEIIEAFVVELRKRSAP
SIO_010081: LOC119140505
subclass of: SO_0000673
so part of: LOC119140505
location: complement(join(266251..266288,266382..266439,266523..266601,266879..266924,267095..267137,267361..267421,267527..267636,267719..267936,268061..268101,268210..268273,268367..268535,268956..269127,270181..270324,270925..271028))
location: region:266251-271028:-1
so has part: feature:270925-271028:-1:exon
so has part: feature:270181-270324:-1:exon
so has part: feature:268956-269127:-1:exon
so has part: feature:268367-268535:-1:exon
so has part: feature:268210-268273:-1:exon
so has part: feature:268061-268101:-1:exon
so has part: feature:267719-267936:-1:exon
so has part: feature:267527-267636:-1:exon
so has part: feature:267361-267421:-1:exon
so has part: feature:267095-267137:-1:exon
so has part: feature:266879-266924:-1:exon
so has part: feature:266523-266601:-1:exon
so has part: feature:266382-266439:-1:exon
so has part: feature:266251-266288:-1:exon

XP_037227807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270925-271028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270181-270324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268956-269127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268367-268535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268210-268273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:268061-268101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267719-267936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267527-267636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267361-267421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267095-267137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266879-266924:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:266523-266601:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:266382-266439:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:266251-266288:-1:exon

LOC119140507
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 271716..273903
location: region:271716-273903:1
so has part: feature:271716-273903:1:exon
subclass of: SO_0000010

119140507
type: Gene
SIO_000068: ncbigene

position:271716:1
position: 271716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273903:1
position: 273903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271716-273903:1:exon

LOC119140507
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140507
product: reticulon-2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_037371915.1
SIO_010081: LOC119140507
subclass of: SO_0000673
so part of: LOC119140507
location: join(271716..272049,272940..272984,273099..273498,273781..273903)
location: region:271716-273903:1
so has part: feature:271716-272049:1:exon
so has part: feature:272940-272984:1:exon
so has part: feature:273099-273498:1:exon
so has part: feature:273781-273903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271716-272049:1:exon

position:272049:1
position: 272049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272940-272984:1:exon

position:272940:1
position: 272940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272984:1
position: 272984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273099-273498:1:exon

position:273099:1
position: 273099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273498:1
position: 273498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:273781-273903:1:exon

position:273781:1
position: 273781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119140507
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140507
product: reticulon-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_037371916.1
SIO_010081: LOC119140507
subclass of: SO_0000673
so part of: LOC119140507
location: join(271716..272049,272940..272984,273099..273498,273784..273895)
location: region:271716-273895:1
so has part: feature:271716-272049:1:exon
so has part: feature:272940-272984:1:exon
so has part: feature:273099-273498:1:exon
so has part: feature:273784-273895:1:exon

position:273895:1
position: 273895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271716-272049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272940-272984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273099-273498:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273784-273895:1:exon

position:273784:1
position: 273784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119140507
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-2-like
translation: MPVPGSRCRRPVADAGLGARPPGGPRPQPRPPAAALCPPRAPPWRCGDARRGRPGGNREPHAGAAAMGQVLGFAHCKEAPSTASTTPDSTEGGNEESDFPELQVASEPPEEEEEEEDEDGVTAAGGEPRGPPPGTHFLLHRLSRRGVLQRAGPPLSSRLPSGPPTPPELRTPRGAPPGAGPPLGCQSPPQTS
SIO_010081: LOC119140507
subclass of: SO_0000673
so part of: LOC119140507
location: join(271821..272049,272940..272984,273099..273403)
location: region:271821-273403:1
so has part: feature:271821-272049:1:exon
so has part: feature:272940-272984:1:exon
so has part: feature:273099-273403:1:exon

XP_037227812.1
type: Protein
SIO_000068: ncbiprotein

position:271821:1
position: 271821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273403:1
position: 273403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271821-272049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272940-272984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273099-273403:1:exon

LOC119140507
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-2-like
translation: MPVPGSRCRRPVADAGLGARPPGGPRPQPRPPAAALCPPRAPPWRCGDARRGRPGGNREPHAGAAAMGQVLGFAHCKEAPSTASTTPDSTEGGNEESDFPELQVASEPPEEEEEEEDEDGVTAAGGEPRGPPPGTHFLLHRLSRRGVLQRAGPPLSSRLPSGPPTPPELRTPRGAPPGAGPPLGCQSPPQTS
SIO_010081: LOC119140507
subclass of: SO_0000673
so part of: LOC119140507
location: join(271821..272049,272940..272984,273099..273403)
location: region:271821-273403:1
so has part: feature:271821-272049:1:exon
so has part: feature:272940-272984:1:exon
so has part: feature:273099-273403:1:exon

XP_037227813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271821-272049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272940-272984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273099-273403:1:exon

RTN2
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: RTN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 274122..277334
location: region:274122-277334:1
so has part: feature:274122-277334:1:exon
subclass of: SO_0000010

119140506
type: Gene
SIO_000068: ncbigene

position:274122:1
position: 274122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277334:1
position: 277334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274122-277334:1:exon

RTN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: RTN2
product: reticulon 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037371914.1
SIO_010081: RTN2
subclass of: SO_0000673
so part of: RTN2
location: join(274122..274149,274952..275159,275497..275635,276160..276229,276703..276749,276918..276976,277091..277334)
location: region:274122-277334:1
so has part: feature:274122-274149:1:exon
so has part: feature:274952-275159:1:exon
so has part: feature:275497-275635:1:exon
so has part: feature:276160-276229:1:exon
so has part: feature:276703-276749:1:exon
so has part: feature:276918-276976:1:exon
so has part: feature:277091-277334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274122-274149:1:exon

position:274149:1
position: 274149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274952-275159:1:exon

position:274952:1
position: 274952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275159:1
position: 275159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275497-275635:1:exon

position:275497:1
position: 275497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275635:1
position: 275635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:276160-276229:1:exon

position:276160:1
position: 276160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276229:1
position: 276229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:276703-276749:1:exon

position:276703:1
position: 276703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276749:1
position: 276749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:276918-276976:1:exon

position:276918:1
position: 276918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276976:1
position: 276976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277091-277334:1:exon

position:277091:1
position: 277091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RTN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: RTN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-2
translation: MEGQVWELLYWRAPGRSALVLVGVLGTLGCLARFSAISVGAYGALATLAVTVPLRLHRVALRVLRRHPPEPPCRTQPEGTVGLSPEEQQRWARRLAQHLVAATRTLTRLFLVHSVPESLKFAFFFYLLTYVGAVCNGLTLLGAGVICAFTFPVLYRHHQAQIDQYVSLVRSHLSHLRARIQAKLSSAKVKPR
SIO_010081: RTN2
subclass of: SO_0000673
so part of: RTN2
location: join(274137..274149,274952..275159,275497..275635,276160..276229,276703..276749,276918..276976,277091..277133)
location: region:274137-277133:1
so has part: feature:274137-274149:1:exon
so has part: feature:274952-275159:1:exon
so has part: feature:275497-275635:1:exon
so has part: feature:276160-276229:1:exon
so has part: feature:276703-276749:1:exon
so has part: feature:276918-276976:1:exon
so has part: feature:277091-277133:1:exon

XP_037227811.1
type: Protein
SIO_000068: ncbiprotein

position:274137:1
position: 274137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277133:1
position: 277133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274137-274149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274952-275159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275497-275635:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276160-276229:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276703-276749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276918-276976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277091-277133:1:exon

FOSB
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: FOSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279891..286164
location: region:279891-286164:1
so has part: feature:279891-286164:1:exon
subclass of: SO_0000010

119140516
type: Gene
SIO_000068: ncbigene

position:279891:1
position: 279891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286164:1
position: 286164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279891-286164:1:exon

FOSB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: FOSB
product: FosB proto-oncogene, AP-1 transcription factor subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037371936.1
SIO_010081: FOSB
subclass of: SO_0000673
so part of: FOSB
location: join(279891..281078,282396..282680,282794..282901,283847..286164)
location: region:279891-286164:1
so has part: feature:279891-281078:1:exon
so has part: feature:282396-282680:1:exon
so has part: feature:282794-282901:1:exon
so has part: feature:283847-286164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279891-281078:1:exon

position:281078:1
position: 281078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282396-282680:1:exon

position:282396:1
position: 282396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282680:1
position: 282680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282794-282901:1:exon

position:282794:1
position: 282794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282901:1
position: 282901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:283847-286164:1:exon

position:283847:1
position: 283847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOSB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: FOSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein fosB
translation: MYQGFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPGAAAAAQECSGLGDMPGSFVPTVTAITTSQDLQWLVQPTLISSVAQSQPPGAPMAHPPPPVDPYDLPGPSYSTPGMGAFATGSTAPPARPTRARPRRSREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKEKDRLEFVLVAHAPACKLPYEDVGSLGAQVSTLGKEEPAGTVTFLPPGPFQPSAQGPFPSCCFGGPSGPPNPSYTSSFVFTHPEGTTCGASHQRSSSSDQSSDSLNSPSLLAL
SIO_010081: FOSB
subclass of: SO_0000673
so part of: FOSB
location: join(280953..281078,282396..282680,282794..282901,283847..284251)
location: region:280953-284251:1
so has part: feature:280953-281078:1:exon
so has part: feature:282396-282680:1:exon
so has part: feature:282794-282901:1:exon
so has part: feature:283847-284251:1:exon

XP_037227833.1
type: Protein
SIO_000068: ncbiprotein

position:280953:1
position: 280953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284251:1
position: 284251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280953-281078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282396-282680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282794-282901:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283847-284251:1:exon

EXOC3L2
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: EXOC3L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(290193..297385)
location: region:290193-297385:-1
so has part: feature:290193-297385:-1:exon
subclass of: SO_0000010

119140522
type: Gene
SIO_000068: ncbigene

position:290193:-1
position: 290193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297385:-1
position: 297385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290193-297385:-1:exon

EXOC3L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: EXOC3L2
product: exocyst complex component 3 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371943.1
SIO_010081: EXOC3L2
subclass of: SO_0000673
so part of: EXOC3L2
location: complement(join(290193..290608,291331..291452,291543..291698,291770..291892,291999..292134,292220..292327,292773..292873,293129..293239,293609..293723,293859..294468,294950..295382,295608..296048,297281..297385))
location: region:290193-297385:-1
so has part: feature:297281-297385:-1:exon
so has part: feature:295608-296048:-1:exon
so has part: feature:294950-295382:-1:exon
so has part: feature:293859-294468:-1:exon
so has part: feature:293609-293723:-1:exon
so has part: feature:293129-293239:-1:exon
so has part: feature:292773-292873:-1:exon
so has part: feature:292220-292327:-1:exon
so has part: feature:291999-292134:-1:exon
so has part: feature:291770-291892:-1:exon
so has part: feature:291543-291698:-1:exon
so has part: feature:291331-291452:-1:exon
so has part: feature:290193-290608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297281-297385:-1:exon

position:297281:-1
position: 297281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295608-296048:-1:exon

position:295608:-1
position: 295608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296048:-1
position: 296048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294950-295382:-1:exon

position:294950:-1
position: 294950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295382:-1
position: 295382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:293859-294468:-1:exon

position:293859:-1
position: 293859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294468:-1
position: 294468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:293609-293723:-1:exon

position:293609:-1
position: 293609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293723:-1
position: 293723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:293129-293239:-1:exon

position:293129:-1
position: 293129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293239:-1
position: 293239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:292773-292873:-1:exon

position:292773:-1
position: 292773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292873:-1
position: 292873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:292220-292327:-1:exon

position:292220:-1
position: 292220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292327:-1
position: 292327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291999-292134:-1:exon

position:291999:-1
position: 291999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292134:-1
position: 292134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:291770-291892:-1:exon

position:291770:-1
position: 291770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291892:-1
position: 291892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:291543-291698:-1:exon

position:291543:-1
position: 291543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291698:-1
position: 291698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:291331-291452:-1:exon

position:291331:-1
position: 291331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291452:-1
position: 291452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:290193-290608:-1:exon

position:290608:-1
position: 290608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EXOC3L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: EXOC3L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 3-like protein 2
translation: MGRAGPEPEPEVATTAVGGARAGRLATPLKDAVLSRPRCHHCSVQCHRHSAQCHRQSVLGATTTAPSATANTPGAAATALGAAATALSATARVLGAIATAPARHCHSVLAATTTARVPRNAQCHCQSILAATTTAPTATATAPAVTATESSVTTTVPGATATVSSVPPLQRPVPAPQRLVPALMPLLKKAPKEEEEDGDPFAANPESRYRRRATLERLVGLAPFGRARRPPPKDGEGTGGRARRRSEDFGLLRRLPGWRKASVETLGERPVPKRGSLLRLALGTRGRRGSAGERLATLEGEGVAAGEQDGGGQRQEGSGKAREPLSVLEILELIQRRDLVVADEQIIALEAECVTSPPSPSSSPGPAGGRRVRDVALLYQALVAQLWAVVAEAVPAARPYPPLRSVIRVLEQEEAADRQHPPGTPGRPRALRRRWREAVERAAGERLAQVAPAAGLGARLAALAARVVGDLGAVRCHVAPAYPPEYGAFGVYARGYHRALAQQLGALAQRPLPVPDLYLLLDWHSNTYPREVLGHPEVGALLQAQALGPLLPHETQRSLESSCIAAVKAKVEVAVAQELQLSEDTWAEEASSQDLQEGLATRVTGLLRAHVDRAPQITPEFGMEMAHSLLGVLVAFLHSFQRKVERFLEAPGEATPPDGATGRAIALANCCPPFRAFAERLAQFGHSESEELRRQAHGALDKVTRLCHHVLTQRLFEDLKPYFNKLMKRKWLTSSDAFDTIVMLITSFTQKLRPLRPEPYQVLVSELHRRVLIEYVRPLLQVRLVCTSSKMRARVAARLGDEARQLRELFSRLDSASPWLDSVVPRLRELLVLEDTAALQMEVGVLVRDFPDVRRKHVAAVLDVRGLRGQAARQEILGVVQDLEQSEAEPELPRQRAFFSELAVAREVRCLPFHLPRLARLSRLRLRRPQPSRPGQARL
SIO_010081: EXOC3L2
subclass of: SO_0000673
so part of: EXOC3L2
location: complement(join(290350..290608,291331..291452,291543..291698,291770..291892,291999..292134,292220..292327,292773..292873,293129..293239,293609..293723,293859..294468,294950..295382,295608..296048,297281..297385))
location: region:290350-297385:-1
so has part: feature:297281-297385:-1:exon
so has part: feature:295608-296048:-1:exon
so has part: feature:294950-295382:-1:exon
so has part: feature:293859-294468:-1:exon
so has part: feature:293609-293723:-1:exon
so has part: feature:293129-293239:-1:exon
so has part: feature:292773-292873:-1:exon
so has part: feature:292220-292327:-1:exon
so has part: feature:291999-292134:-1:exon
so has part: feature:291770-291892:-1:exon
so has part: feature:291543-291698:-1:exon
so has part: feature:291331-291452:-1:exon
so has part: feature:290350-290608:-1:exon

XP_037227840.1
type: Protein
SIO_000068: ncbiprotein

position:290350:-1
position: 290350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297281-297385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295608-296048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:294950-295382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293859-294468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293609-293723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293129-293239:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:292773-292873:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:292220-292327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291999-292134:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291770-291892:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:291543-291698:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:291331-291452:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290350-290608:-1:exon

MARK4
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: MARK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 297384..307524
location: region:297384-307524:1
so has part: feature:297384-307524:1:exon
subclass of: SO_0000010

119140487
type: Gene
SIO_000068: ncbigene

position:297384:1
position: 297384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307524:1
position: 307524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297384-307524:1:exon

MARK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: MARK4
product: microtubule affinity regulating kinase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_037371883.1
SIO_010081: MARK4
subclass of: SO_0000673
so part of: MARK4
location: join(297384..297636,298630..298827,299231..299284,299410..299458,299540..299605,299835..299905,300390..300446,301218..301454,301670..301789,302195..302294,302403..302512,302610..302766,302914..303128,303658..303761,303856..304119,305532..305576,306180..307524)
location: region:297384-307524:1
so has part: feature:297384-297636:1:exon
so has part: feature:298630-298827:1:exon
so has part: feature:299231-299284:1:exon
so has part: feature:299410-299458:1:exon
so has part: feature:299540-299605:1:exon
so has part: feature:299835-299905:1:exon
so has part: feature:300390-300446:1:exon
so has part: feature:301218-301454:1:exon
so has part: feature:301670-301789:1:exon
so has part: feature:302195-302294:1:exon
so has part: feature:302403-302512:1:exon
so has part: feature:302610-302766:1:exon
so has part: feature:302914-303128:1:exon
so has part: feature:303658-303761:1:exon
so has part: feature:303856-304119:1:exon
so has part: feature:305532-305576:1:exon
so has part: feature:306180-307524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297384-297636:1:exon

position:297636:1
position: 297636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298630-298827:1:exon

position:298630:1
position: 298630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298827:1
position: 298827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:299231-299284:1:exon

position:299231:1
position: 299231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299284:1
position: 299284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299410-299458:1:exon

position:299410:1
position: 299410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299458:1
position: 299458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:299540-299605:1:exon

position:299540:1
position: 299540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299605:1
position: 299605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:299835-299905:1:exon

position:299835:1
position: 299835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299905:1
position: 299905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:300390-300446:1:exon

position:300390:1
position: 300390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300446:1
position: 300446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:301218-301454:1:exon

position:301218:1
position: 301218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301454:1
position: 301454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:301670-301789:1:exon

position:301670:1
position: 301670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301789:1
position: 301789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:302195-302294:1:exon

position:302195:1
position: 302195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302294:1
position: 302294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:302403-302512:1:exon

position:302403:1
position: 302403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302512:1
position: 302512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:302610-302766:1:exon

position:302610:1
position: 302610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302766:1
position: 302766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:302914-303128:1:exon

position:302914:1
position: 302914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303128:1
position: 303128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:303658-303761:1:exon

position:303658:1
position: 303658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303761:1
position: 303761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:303856-304119:1:exon

position:303856:1
position: 303856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304119:1
position: 304119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:305532-305576:1:exon

position:305532:1
position: 305532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305576:1
position: 305576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:306180-307524:1:exon

position:306180:1
position: 306180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MARK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: MARK4
product: microtubule affinity regulating kinase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_037371884.1
SIO_010081: MARK4
subclass of: SO_0000673
so part of: MARK4
location: join(297385..297636,298630..298827,299231..299284,299410..299458,299540..299605,299835..299905,300390..300446,301218..301454,301670..301789,302195..302294,302403..302512,302610..302766,302914..303128,303658..303761,303856..304119,304196..304275,305532..305576,306180..306362)
location: region:297385-306362:1
so has part: feature:297385-297636:1:exon
so has part: feature:298630-298827:1:exon
so has part: feature:299231-299284:1:exon
so has part: feature:299410-299458:1:exon
so has part: feature:299540-299605:1:exon
so has part: feature:299835-299905:1:exon
so has part: feature:300390-300446:1:exon
so has part: feature:301218-301454:1:exon
so has part: feature:301670-301789:1:exon
so has part: feature:302195-302294:1:exon
so has part: feature:302403-302512:1:exon
so has part: feature:302610-302766:1:exon
so has part: feature:302914-303128:1:exon
so has part: feature:303658-303761:1:exon
so has part: feature:303856-304119:1:exon
so has part: feature:304196-304275:1:exon
so has part: feature:305532-305576:1:exon
so has part: feature:306180-306362:1:exon

position:297385:1
position: 297385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306362:1
position: 306362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297385-297636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298630-298827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299231-299284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299410-299458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299540-299605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299835-299905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:300390-300446:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301218-301454:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301670-301789:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302195-302294:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:302403-302512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:302610-302766:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:302914-303128:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303658-303761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303856-304119:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:304196-304275:1:exon

position:304196:1
position: 304196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304275:1
position: 304275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:305532-305576:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:306180-306362:1:exon

MARK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: MARK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP/microtubule affinity-regulating kinase 4 isoform X1
translation: MSSRSALAAGNERNADTLTGLGGSRSEKGSAWSSRSLGARCRNSIASCPEEQPHIGNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDADANIKIADFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCENILRRFLVLNPAKRCTLEQIMKDKWINIGYEGDELKPYKEPEEDFGDAKRIEVMVGMGYTREEIKESLSNQKYNEVTATYLLLGRKNEVEAGESRTGSSLSLARVRAPSEAANGTGKAAAHGKSQRGATTYHRQRRHSDFCGPSPVPMHPKRSPTSAGEGELKEERVPPRKASCSVGGGGRGVPPSSPMVSSANNPNKAEIPDRHKDGAINANNLPPSVMARRNTYVCTERPGTERHPLLPNGKENSSVTGRVPPASPSSHSIAAASSERARLARGTGVRSTFHGGQIRDRRPVGGSNGPPASPPLAPEASPLPQSRSRATSNLFSKLTSKLTRRVADEPERIGGPALTSCHLPWDQKEAEPRLLRCPWHVKVTSARPAEAVMAALRQATLSAGCRARQPQPFLLSCTHDRGPSEHFCHFEAEVCRLQRLGLHGVLFRRLAGTAGAFRATLARVAGQLQL
SIO_010081: MARK4
subclass of: SO_0000673
so part of: MARK4
location: join(297586..297636,298630..298827,299231..299284,299410..299458,299540..299605,299835..299905,300390..300446,301218..301454,301670..301789,302195..302294,302403..302512,302610..302766,302914..303128,303658..303761,303856..304119,305532..305576,306180..306513)
location: region:297586-306513:1
so has part: feature:297586-297636:1:exon
so has part: feature:298630-298827:1:exon
so has part: feature:299231-299284:1:exon
so has part: feature:299410-299458:1:exon
so has part: feature:299540-299605:1:exon
so has part: feature:299835-299905:1:exon
so has part: feature:300390-300446:1:exon
so has part: feature:301218-301454:1:exon
so has part: feature:301670-301789:1:exon
so has part: feature:302195-302294:1:exon
so has part: feature:302403-302512:1:exon
so has part: feature:302610-302766:1:exon
so has part: feature:302914-303128:1:exon
so has part: feature:303658-303761:1:exon
so has part: feature:303856-304119:1:exon
so has part: feature:305532-305576:1:exon
so has part: feature:306180-306513:1:exon

XP_037227780.1
type: Protein
SIO_000068: ncbiprotein

position:297586:1
position: 297586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306513:1
position: 306513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297586-297636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298630-298827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299231-299284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299410-299458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299540-299605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299835-299905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:300390-300446:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301218-301454:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301670-301789:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302195-302294:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:302403-302512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:302610-302766:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:302914-303128:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303658-303761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303856-304119:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:305532-305576:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:306180-306513:1:exon

MARK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: MARK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP/microtubule affinity-regulating kinase 4 isoform X2
translation: MSSRSALAAGNERNADTLTGLGGSRSEKGSAWSSRSLGARCRNSIASCPEEQPHIGNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDADANIKIADFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCENILRRFLVLNPAKRCTLEQIMKDKWINIGYEGDELKPYKEPEEDFGDAKRIEVMVGMGYTREEIKESLSNQKYNEVTATYLLLGRKNEVEAGESRTGSSLSLARVRAPSEAANGTGKAAAHGKSQRGATTYHRQRRHSDFCGPSPVPMHPKRSPTSAGEGELKEERVPPRKASCSVGGGGRGVPPSSPMVSSANNPNKAEIPDRHKDGAINANNLPPSVMARRNTYVCTERPGTERHPLLPNGKENSSVTGRVPPASPSSHSIAAASSERARLARGTGVRSTFHGGQIRDRRPVGGSNGPPASPPLAPEASPLPQSRSRATSNLFSKLTSKLTRRVTLDPSKRQSSNRCVSGTPAPPGAKIRSQTNLRESGDLRSQVAIYLGIKRKPNPGCSDAPGM
SIO_010081: MARK4
subclass of: SO_0000673
so part of: MARK4
location: join(297586..297636,298630..298827,299231..299284,299410..299458,299540..299605,299835..299905,300390..300446,301218..301454,301670..301789,302195..302294,302403..302512,302610..302766,302914..303128,303658..303761,303856..304119,304196..304275,305532..305576,306180..306244)
location: region:297586-306244:1
so has part: feature:297586-297636:1:exon
so has part: feature:298630-298827:1:exon
so has part: feature:299231-299284:1:exon
so has part: feature:299410-299458:1:exon
so has part: feature:299540-299605:1:exon
so has part: feature:299835-299905:1:exon
so has part: feature:300390-300446:1:exon
so has part: feature:301218-301454:1:exon
so has part: feature:301670-301789:1:exon
so has part: feature:302195-302294:1:exon
so has part: feature:302403-302512:1:exon
so has part: feature:302610-302766:1:exon
so has part: feature:302914-303128:1:exon
so has part: feature:303658-303761:1:exon
so has part: feature:303856-304119:1:exon
so has part: feature:304196-304275:1:exon
so has part: feature:305532-305576:1:exon
so has part: feature:306180-306244:1:exon

XP_037227781.1
type: Protein
SIO_000068: ncbiprotein

position:306244:1
position: 306244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297586-297636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298630-298827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299231-299284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299410-299458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299540-299605:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299835-299905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:300390-300446:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301218-301454:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:301670-301789:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302195-302294:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:302403-302512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:302610-302766:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:302914-303128:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303658-303761:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303856-304119:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:304196-304275:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:305532-305576:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:306180-306244:1:exon

CKM
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: CKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307772..312357)
location: region:307772-312357:-1
so has part: feature:307772-312357:-1:exon
subclass of: SO_0000010

119140488
type: Gene
SIO_000068: ncbigene

position:307772:-1
position: 307772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312357:-1
position: 312357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307772-312357:-1:exon

CKM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: CKM
product: creatine kinase, M-type
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 78 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037371885.1
SIO_010081: CKM
subclass of: SO_0000673
so part of: CKM
location: complement(join(307772..308004,308469..308658,308868..308991,309410..309581,310261..310393,310798..310952,311295..311489,312293..312357))
location: region:307772-312357:-1
so has part: feature:312293-312357:-1:exon
so has part: feature:311295-311489:-1:exon
so has part: feature:310798-310952:-1:exon
so has part: feature:310261-310393:-1:exon
so has part: feature:309410-309581:-1:exon
so has part: feature:308868-308991:-1:exon
so has part: feature:308469-308658:-1:exon
so has part: feature:307772-308004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312293-312357:-1:exon

position:312293:-1
position: 312293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311295-311489:-1:exon

position:311295:-1
position: 311295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311489:-1
position: 311489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310798-310952:-1:exon

position:310798:-1
position: 310798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310952:-1
position: 310952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:310261-310393:-1:exon

position:310261:-1
position: 310261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310393:-1
position: 310393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:309410-309581:-1:exon

position:309410:-1
position: 309410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309581:-1
position: 309581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:308868-308991:-1:exon

position:308868:-1
position: 308868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308991:-1
position: 308991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:308469-308658:-1:exon

position:308469:-1
position: 308469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308658:-1
position: 308658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:307772-308004:-1:exon

position:308004:-1
position: 308004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CKM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: CKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: creatine kinase M-type
translation: MPFSSTHNRHKLNFSPEEEFPDLAKHNNHMAKVLTPALYQRLRDKETPSGFTLDDVIQTGVDNPGHPFIMTVGCVAGDEESYEVFKELFDPVIQDRHGGYKPTDKHRTDLNHENLKGGEDLDPKYVLSSRVRTGRSIKGYSLPPHCSRGERRAVEKLSVTALNSLDGEFKGKYYPLKAMTEQEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWVNEEDHLRVISMEKGGNMKEVFRRFCVGLKKIEEIFKKAGHPFMWTEHLGYILTCPSNLGTGLRGGVHVRLPKLSQHPKFEEILKRLRLQKRGTGGVDTAAVGAVFDISNADRLGSSEVEQVQLVVDGVKLMVEMEKKLEQNQPIDDMIPAQK
SIO_010081: CKM
subclass of: SO_0000673
so part of: CKM
location: complement(join(307826..308004,308469..308658,308868..308991,309410..309581,310261..310393,310798..310952,311295..311487))
location: region:307826-311487:-1
so has part: feature:311295-311487:-1:exon
so has part: feature:310798-310952:-1:exon
so has part: feature:310261-310393:-1:exon
so has part: feature:309410-309581:-1:exon
so has part: feature:308868-308991:-1:exon
so has part: feature:308469-308658:-1:exon
so has part: feature:307826-308004:-1:exon

XP_037227782.1
type: Protein
SIO_000068: ncbiprotein

position:307826:-1
position: 307826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311487:-1
position: 311487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311295-311487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310798-310952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310261-310393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309410-309581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308868-308991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:308469-308658:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307826-308004:-1:exon

ERCC2
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: ERCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(314151..323615)
location: region:314151-323615:-1
so has part: feature:314151-323615:-1:exon
subclass of: SO_0000010

119140486
type: Gene
SIO_000068: ncbigene

position:314151:-1
position: 314151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323615:-1
position: 323615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314151-323615:-1:exon

ERCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: ERCC2
product: ERCC excision repair 2, TFIIH core complex helicase subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_037371878.1
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(314151..314810,315518..315661,315749..315892,316548..316618,316924..316996,317088..317180,317568..317689,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323615))
location: region:314151-323615:-1
so has part: feature:323555-323615:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317568-317689:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-316996:-1:exon
so has part: feature:316548-316618:-1:exon
so has part: feature:315749-315892:-1:exon
so has part: feature:315518-315661:-1:exon
so has part: feature:314151-314810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323615:-1:exon

position:323555:-1
position: 323555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

position:322955:-1
position: 322955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323054:-1
position: 323054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

position:322801:-1
position: 322801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322878:-1
position: 322878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

position:322670:-1
position: 322670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322732:-1
position: 322732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

position:322466:-1
position: 322466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322579:-1
position: 322579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

position:322272:-1
position: 322272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322388:-1
position: 322388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

position:321940:-1
position: 321940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322056:-1
position: 322056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

position:321742:-1
position: 321742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321865:-1
position: 321865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

position:321546:-1
position: 321546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321642:-1
position: 321642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

position:321326:-1
position: 321326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321459:-1
position: 321459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

position:320433:-1
position: 320433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320601:-1
position: 320601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

position:319721:-1
position: 319721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319839:-1
position: 319839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

position:319287:-1
position: 319287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319356:-1
position: 319356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

position:318969:-1
position: 318969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319038:-1
position: 319038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

position:318075:-1
position: 318075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318176:-1
position: 318176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

position:317930:-1
position: 317930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317993:-1
position: 317993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:317568-317689:-1:exon

position:317568:-1
position: 317568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317689:-1
position: 317689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

position:317088:-1
position: 317088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317180:-1
position: 317180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:316924-316996:-1:exon

position:316924:-1
position: 316924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316996:-1
position: 316996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:316548-316618:-1:exon

position:316548:-1
position: 316548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316618:-1
position: 316618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:315749-315892:-1:exon

position:315749:-1
position: 315749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315892:-1
position: 315892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:315518-315661:-1:exon

position:315518:-1
position: 315518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315661:-1
position: 315661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:314151-314810:-1:exon

position:314810:-1
position: 314810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: ERCC2
product: ERCC excision repair 2, TFIIH core complex helicase subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037371876.1
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(314151..314810,315518..315661,315749..315892,316548..316618,316924..317008,317088..317180,317568..317689,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323615))
location: region:314151-323615:-1
so has part: feature:323555-323615:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317568-317689:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-317008:-1:exon
so has part: feature:316548-316618:-1:exon
so has part: feature:315749-315892:-1:exon
so has part: feature:315518-315661:-1:exon
so has part: feature:314151-314810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317568-317689:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-317008:-1:exon

position:317008:-1
position: 317008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:316548-316618:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:315749-315892:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:315518-315661:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:314151-314810:-1:exon

ERCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: ERCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription and DNA repair factor IIH helicase subunit XPD isoform X2
translation: MKLNIDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQRARPLDVTKLIYCSRTVPEIEKVIEELRKLMDFYEKELGEKVPFLGLALSSRKNLCIHPEVSSLRFGKEVDSRCLSLTASYVRAQHQHDASLPACRFFEDFDTHGRDVPLPYGIYNLDDLKAHGRRCGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDAMGVTITRRTLERCQANVATLQATIQKVKETDAQRLADEYRRLVEGLREASAARHTDLYLANPVLPDEVLQEAVPGSIRTGEHFVGFLRRLLGYVGARLRGGHVVRESPPAFLRDLRDKVCIERKPLRFCAERLRSLLVALAVPDLGSFAPLTLLANFATLVSTYSRGFTIIIEPFDDKTPSIANPVLHFSCLDASVAIKPVFERFQSVIITSGTLSPLDMYPKILDFRPVTMATFTMTLARTCLCPMIVGRGNDQVAITSKFESREDIAVLRNCGALLLELSAVVPDGLVAFFTSYRHLEGVVAAWYEQGILENIQRNKLIFIETQDGAETSVALEKYQEACENGRGAILLSIARGKVSEGIDFVHHYGRAVVMFGVPYVYTQSRILKARLEFLRDQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGLMVFADKRFARADKRGKLPRWIQDHLSEANWNLTVDEAVQVAKFFLRQMAQPFHQEDQLGLSLLTLEQLQSEETLQRIEQIAQQV
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(314718..314810,315518..315661,315749..315892,316548..316618,316924..316996,317088..317180,317568..317689,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323559))
location: region:314718-323559:-1
so has part: feature:323555-323559:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317568-317689:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-316996:-1:exon
so has part: feature:316548-316618:-1:exon
so has part: feature:315749-315892:-1:exon
so has part: feature:315518-315661:-1:exon
so has part: feature:314718-314810:-1:exon

XP_037227775.1
type: Protein
SIO_000068: ncbiprotein

position:314718:-1
position: 314718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323559:-1
position: 323559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317568-317689:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-316996:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316548-316618:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:315749-315892:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:315518-315661:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:314718-314810:-1:exon

ERCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: ERCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
translation: MKLNIDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQRARPLDVTKLIYCSRTVPEIEKVIEELRKLMDFYEKELGEKVPFLGLALSSRKNLCIHPEVSSLRFGKEVDSRCLSLTASYVRAQHQHDASLPACRFFEDFDTHGRDVPLPYGIYNLDDLKAHGRRCGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDAMGVTITRRTLERCQANVATLQATIQKVKETDAQRLADEYRRLVEGLREASAARHTDLYLANPVLPDEVLQEAVPGSIRTGEHFVGFLRRLLGYVGARLRGGHVVRESPPAFLRDLRDKVCIERKPLRFCAERLRSLLVALAVPDLGSFAPLTLLANFATLVSTYSRGFTIIIEPFDDKTPSIANPVLHFSCLDASVAIKPVFERFQSVIITSGTLSPLDMYPKILDFRPVTMATFTMTLARTCLCPMIVGRGNDQVAITSKFESREDIAVLRNCGALLLELSAVVPDGLVAFFTSYRHLEGVVAAWYEQGILENIQRNKLIFIETQDGAETSVALEKYQEWHSQACENGRGAILLSIARGKVSEGIDFVHHYGRAVVMFGVPYVYTQSRILKARLEFLRDQFQIRENDFLTFDAMRHAAQCVGRALRGKTDYGLMVFADKRFARADKRGKLPRWIQDHLSEANWNLTVDEAVQVAKFFLRQMAQPFHQEDQLGLSLLTLEQLQSEETLQRIEQIAQQV
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(314718..314810,315518..315661,315749..315892,316548..316618,316924..317008,317088..317180,317568..317689,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323559))
location: region:314718-323559:-1
so has part: feature:323555-323559:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317568-317689:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-317008:-1:exon
so has part: feature:316548-316618:-1:exon
so has part: feature:315749-315892:-1:exon
so has part: feature:315518-315661:-1:exon
so has part: feature:314718-314810:-1:exon

XP_037227773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317568-317689:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-317008:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316548-316618:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:315749-315892:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:315518-315661:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:314718-314810:-1:exon

ERCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: ERCC2
product: ERCC excision repair 2, TFIIH core complex helicase subunit, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_037371882.1
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(315780..315892,316548..316618,316924..316996,317088..317180,317568..317610,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323615))
location: region:315780-323615:-1
so has part: feature:323555-323615:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317568-317610:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-316996:-1:exon
so has part: feature:316548-316618:-1:exon
so has part: feature:315780-315892:-1:exon

position:315780:-1
position: 315780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317568-317610:-1:exon

position:317610:-1
position: 317610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-316996:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316548-316618:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:315780-315892:-1:exon

ERCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: ERCC2
product: ERCC excision repair 2, TFIIH core complex helicase subunit, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037371881.1
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(315780..315892,316548..316618,316924..317008,317088..317180,317568..317610,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323615))
location: region:315780-323615:-1
so has part: feature:323555-323615:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317568-317610:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-317008:-1:exon
so has part: feature:316548-316618:-1:exon
so has part: feature:315780-315892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317568-317610:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-317008:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316548-316618:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:315780-315892:-1:exon

ERCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: ERCC2
product: ERCC excision repair 2, TFIIH core complex helicase subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_037371880.1
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(315780..315892,316548..316618,316924..316996,317088..317180,317578..317689,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323615))
location: region:315780-323615:-1
so has part: feature:323555-323615:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317578-317689:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-316996:-1:exon
so has part: feature:316548-316618:-1:exon
so has part: feature:315780-315892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317578-317689:-1:exon

position:317578:-1
position: 317578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-316996:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316548-316618:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:315780-315892:-1:exon

ERCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: ERCC2
product: ERCC excision repair 2, TFIIH core complex helicase subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037371879.1
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(315780..315892,316548..316618,316924..317008,317088..317180,317578..317689,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323615))
location: region:315780-323615:-1
so has part: feature:323555-323615:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317578-317689:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-317008:-1:exon
so has part: feature:316548-316618:-1:exon
so has part: feature:315780-315892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317578-317689:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-317008:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316548-316618:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:315780-315892:-1:exon

ERCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: ERCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription and DNA repair factor IIH helicase subunit XPD isoform X6
translation: MKLNIDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQRARPLDVTKLIYCSRTVPEIEKVIEELRKLMDFYEKELGEKVPFLGLALSSRKNLCIHPEVSSLRFGKEVDSRCLSLTASYVRAQHQHDASLPACRFFEDFDTHGRDVPLPYGIYNLDDLKAHGRRCGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDAMGVTITRRTLERCQANVATLQATIQKVKETDAQRLADEYRRLVEGLREASAARHTDLYLANPVLPDEVLQEAVPGSIRTGEHFVGFLRRLLGYVGARLRGGHVVRESPPAFLRDLRDKVCIERKPLRFCAERLRSLLVALAVPDLGSFAPLTLLANFATLVSTYSRGFTIIIEPFDDKTPSIANPVLHFSCLDASVAIKPVFERFQSVIITSGTLSPLDMYPKILDFRPVTMATFTMTLARTCLCPMIVGRGNDQVAITSKFESREDIATGTWRGSSPPGMSRASWRTSSGINSSSSRRRTGPRPAWRWKSTRRPARTAAAPSCSPSPAARSRRASTLCTTTAGPW
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(316592..316618,316924..316996,317088..317180,317568..317610,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323559))
location: region:316592-323559:-1
so has part: feature:323555-323559:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317568-317610:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-316996:-1:exon
so has part: feature:316592-316618:-1:exon

XP_037227779.1
type: Protein
SIO_000068: ncbiprotein

position:316592:-1
position: 316592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317568-317610:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-316996:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316592-316618:-1:exon

ERCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: ERCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription and DNA repair factor IIH helicase subunit XPD isoform X5
translation: MKLNIDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQRARPLDVTKLIYCSRTVPEIEKVIEELRKLMDFYEKELGEKVPFLGLALSSRKNLCIHPEVSSLRFGKEVDSRCLSLTASYVRAQHQHDASLPACRFFEDFDTHGRDVPLPYGIYNLDDLKAHGRRCGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDAMGVTITRRTLERCQANVATLQATIQKVKETDAQRLADEYRRLVEGLREASAARHTDLYLANPVLPDEVLQEAVPGSIRTGEHFVGFLRRLLGYVGARLRGGHVVRESPPAFLRDLRDKVCIERKPLRFCAERLRSLLVALAVPDLGSFAPLTLLANFATLVSTYSRGFTIIIEPFDDKTPSIANPVLHFSCLDASVAIKPVFERFQSVIITSGTLSPLDMYPKILDFRPVTMATFTMTLARTCLCPMIVGRGNDQVAITSKFESREDIATGTWRGSSPPGMSRASWRTSSGINSSSSRRRTGPRPAWRWKSTRSGTRRPARTAAAPSCSPSPAARSRRASTLCTTTAGPW
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(316592..316618,316924..317008,317088..317180,317568..317610,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323559))
location: region:316592-323559:-1
so has part: feature:323555-323559:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317568-317610:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-317008:-1:exon
so has part: feature:316592-316618:-1:exon

XP_037227778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317568-317610:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-317008:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316592-316618:-1:exon

ERCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: ERCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription and DNA repair factor IIH helicase subunit XPD isoform X4
translation: MKLNIDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQRARPLDVTKLIYCSRTVPEIEKVIEELRKLMDFYEKELGEKVPFLGLALSSRKNLCIHPEVSSLRFGKEVDSRCLSLTASYVRAQHQHDASLPACRFFEDFDTHGRDVPLPYGIYNLDDLKAHGRRCGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDAMGVTITRRTLERCQANVATLQATIQKVKETDAQRLADEYRRLVEGLREASAARHTDLYLANPVLPDEVLQEAVPGSIRTGEHFVGFLRRLLGYVGARLRGGHVVRESPPAFLRDLRDKVCIERKPLRFCAERLRSLLVALAVPDLGSFAPLTLLANFATLVSTYSRGFTIIIEPFDDKTPSIANPVLHFSCLDASVAIKPVFERFQSVIITSGTLSPLDMYPKILDFRPVTMATFTMTLARTCLCPMIVGRGNDQVAITSKFESREDIAVLRNCGALLLELSAVVPDGLVAFFTSYRHLEGVVAAWASWRTSSGINSSSSRRRTGPRPAWRWKSTRRPARTAAAPSCSPSPAARSRRASTLCTTTAGPW
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(316592..316618,316924..316996,317088..317180,317578..317689,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323559))
location: region:316592-323559:-1
so has part: feature:323555-323559:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317578-317689:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-316996:-1:exon
so has part: feature:316592-316618:-1:exon

XP_037227777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317578-317689:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-316996:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316592-316618:-1:exon

ERCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: ERCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription and DNA repair factor IIH helicase subunit XPD isoform X3
translation: MKLNIDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQRARPLDVTKLIYCSRTVPEIEKVIEELRKLMDFYEKELGEKVPFLGLALSSRKNLCIHPEVSSLRFGKEVDSRCLSLTASYVRAQHQHDASLPACRFFEDFDTHGRDVPLPYGIYNLDDLKAHGRRCGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNIDNVCIDAMGVTITRRTLERCQANVATLQATIQKVKETDAQRLADEYRRLVEGLREASAARHTDLYLANPVLPDEVLQEAVPGSIRTGEHFVGFLRRLLGYVGARLRGGHVVRESPPAFLRDLRDKVCIERKPLRFCAERLRSLLVALAVPDLGSFAPLTLLANFATLVSTYSRGFTIIIEPFDDKTPSIANPVLHFSCLDASVAIKPVFERFQSVIITSGTLSPLDMYPKILDFRPVTMATFTMTLARTCLCPMIVGRGNDQVAITSKFESREDIAVLRNCGALLLELSAVVPDGLVAFFTSYRHLEGVVAAWASWRTSSGINSSSSRRRTGPRPAWRWKSTRSGTRRPARTAAAPSCSPSPAARSRRASTLCTTTAGPW
SIO_010081: ERCC2
subclass of: SO_0000673
so part of: ERCC2
location: complement(join(316592..316618,316924..317008,317088..317180,317578..317689,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323559))
location: region:316592-323559:-1
so has part: feature:323555-323559:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317578-317689:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-317008:-1:exon
so has part: feature:316592-316618:-1:exon

XP_037227776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317578-317689:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-317008:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316592-316618:-1:exon

ERCC2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 120794
gene: ERCC2
product: ERCC excision repair 2, TFIIH core complex helicase subunit, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005101627.1
SIO_010081: ERCC2
so part of: ERCC2
location: complement(join(316924..316996,317088..317180,317578..317610,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323615))
location: region:316924-323615:-1
so has part: feature:323555-323615:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317578-317610:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-316996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317578-317610:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-316996:-1:exon

ERCC2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 120794
gene: ERCC2
product: ERCC excision repair 2, TFIIH core complex helicase subunit, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005101628.1
SIO_010081: ERCC2
so part of: ERCC2
location: complement(join(316924..317008,317088..317180,317578..317610,317930..317993,318075..318176,318969..319038,319287..319356,319721..319839,320433..320601,321326..321459,321546..321642,321742..321865,321940..322056,322272..322388,322466..322579,322670..322732,322801..322878,322955..323054,323555..323615))
location: region:316924-323615:-1
so has part: feature:323555-323615:-1:exon
so has part: feature:322955-323054:-1:exon
so has part: feature:322801-322878:-1:exon
so has part: feature:322670-322732:-1:exon
so has part: feature:322466-322579:-1:exon
so has part: feature:322272-322388:-1:exon
so has part: feature:321940-322056:-1:exon
so has part: feature:321742-321865:-1:exon
so has part: feature:321546-321642:-1:exon
so has part: feature:321326-321459:-1:exon
so has part: feature:320433-320601:-1:exon
so has part: feature:319721-319839:-1:exon
so has part: feature:319287-319356:-1:exon
so has part: feature:318969-319038:-1:exon
so has part: feature:318075-318176:-1:exon
so has part: feature:317930-317993:-1:exon
so has part: feature:317578-317610:-1:exon
so has part: feature:317088-317180:-1:exon
so has part: feature:316924-317008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323555-323615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322955-323054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322801-322878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322670-322732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322466-322579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322272-322388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321940-322056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321742-321865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321546-321642:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321326-321459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320433-320601:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319721-319839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:319287-319356:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318969-319038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318075-318176:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:317930-317993:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:317578-317610:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:317088-317180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:316924-317008:-1:exon

DLL3
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: DLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(324167..328690)
location: region:324167-328690:-1
so has part: feature:324167-328690:-1:exon
subclass of: SO_0000010

119140523
type: Gene
SIO_000068: ncbigene

position:324167:-1
position: 324167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328690:-1
position: 328690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324167-328690:-1:exon

DLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: DLL3
product: delta like canonical Notch ligand 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371945.1
SIO_010081: DLL3
subclass of: SO_0000673
so part of: DLL3
location: complement(join(324167..324172,324254..324339,324614..325067,325670..326426,326519..326589,326722..326946,327400..327457,327593..327882,328642..328690))
location: region:324167-328690:-1
so has part: feature:328642-328690:-1:exon
so has part: feature:327593-327882:-1:exon
so has part: feature:327400-327457:-1:exon
so has part: feature:326722-326946:-1:exon
so has part: feature:326519-326589:-1:exon
so has part: feature:325670-326426:-1:exon
so has part: feature:324614-325067:-1:exon
so has part: feature:324254-324339:-1:exon
so has part: feature:324167-324172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328642-328690:-1:exon

position:328642:-1
position: 328642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327593-327882:-1:exon

position:327593:-1
position: 327593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327882:-1
position: 327882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327400-327457:-1:exon

position:327400:-1
position: 327400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327457:-1
position: 327457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326722-326946:-1:exon

position:326722:-1
position: 326722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326946:-1
position: 326946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326519-326589:-1:exon

position:326519:-1
position: 326519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326589:-1
position: 326589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:325670-326426:-1:exon

position:325670:-1
position: 325670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326426:-1
position: 326426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:324614-325067:-1:exon

position:324614:-1
position: 324614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325067:-1
position: 325067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:324254-324339:-1:exon

position:324254:-1
position: 324254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324339:-1
position: 324339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:324167-324172:-1:exon

position:324172:-1
position: 324172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: DLL3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: delta-like protein 3
translation: MRSEGAGGPVVGAGARWVSPVDVLGCWGGGLGSLTSPLQVQPAGVLELRVLSARGGTGGPCGGPPSCRLVFRLCLRPPGGVGCSLGVTHSPPGPPPTPGTPRILRLPFAFPWPGTVSIVIESWRLDEAKGSGGPQGRLLVRTVTRQHLSPGGPWRGGTGGGLRFGTRLRCRPPARGPRCAPRCPPCTPHCPPACRPPRRCWPPCCARRGCRETCGPPGADGSTCPNGGTCTGHRSESPVPRCDTPGPLWALAAAPTAAPVAPAAPVVVAPVAPAALAAAPVAPAAAAAAVLAAPVVALVAPAAAPAAPAVAPGEPAAPVAALAAPAAPVAEAPPAVVEAPAVPVAPAAALVATVAPVAPAAAQVAPAVAPAAAAVAPVAPVVAPVAPVVALEAPVVAPAATPAADPEPPVPVASLPVAGHLVLPEPLPEVPPSPCALGPCFNGGACAPAPAPGPGYTCRCPPGFRGSNCERRTDRCAQHQCLHGGQCRDTGRGALCQCRPGFWGRRCELNADDCAPNPCANGGTCQDGANSFSCSCTLGYGGPRCRHRADACASGPCLHGGTCYTHISGHVCACPPGFMGVRCEEEVGGGGTPPRRHRYPPLPLALAGTVPLVLLAPGVGLAWAARRRRRRTGESSRAAEPGGTPGTTPPGQERRVPRTSATRV
SIO_010081: DLL3
subclass of: SO_0000673
so part of: DLL3
location: complement(join(324167..324172,324254..324339,324614..325067,325670..326426,326519..326589,326722..326946,327400..327457,327593..327882,328642..328690))
location: region:324167-328690:-1
so has part: feature:328642-328690:-1:exon
so has part: feature:327593-327882:-1:exon
so has part: feature:327400-327457:-1:exon
so has part: feature:326722-326946:-1:exon
so has part: feature:326519-326589:-1:exon
so has part: feature:325670-326426:-1:exon
so has part: feature:324614-325067:-1:exon
so has part: feature:324254-324339:-1:exon
so has part: feature:324167-324172:-1:exon

XP_037227842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328642-328690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327593-327882:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327400-327457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326722-326946:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326519-326589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:325670-326426:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:324614-325067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:324254-324339:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:324167-324172:-1:exon

TIMM50
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: TIMM50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(328554..335326)
location: region:328554-335326:-1
so has part: feature:328554-335326:-1:exon
subclass of: SO_0000010

119140511
type: Gene
SIO_000068: ncbigene

position:328554:-1
position: 328554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335326:-1
position: 335326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328554-335326:-1:exon

TIMM50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: TIMM50
product: translocase of inner mitochondrial membrane 50, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371924.1
SIO_010081: TIMM50
subclass of: SO_0000673
so part of: TIMM50
location: complement(join(328554..328941,329061..329167,329257..329413,329522..329615,332342..332346,332490..332594,332698..332817,333282..333340,333637..333658,334311..334342,334431..334587,335162..335326))
location: region:328554-335326:-1
so has part: feature:335162-335326:-1:exon
so has part: feature:334431-334587:-1:exon
so has part: feature:334311-334342:-1:exon
so has part: feature:333637-333658:-1:exon
so has part: feature:333282-333340:-1:exon
so has part: feature:332698-332817:-1:exon
so has part: feature:332490-332594:-1:exon
so has part: feature:332342-332346:-1:exon
so has part: feature:329522-329615:-1:exon
so has part: feature:329257-329413:-1:exon
so has part: feature:329061-329167:-1:exon
so has part: feature:328554-328941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335162-335326:-1:exon

position:335162:-1
position: 335162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334431-334587:-1:exon

position:334431:-1
position: 334431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334587:-1
position: 334587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334311-334342:-1:exon

position:334311:-1
position: 334311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334342:-1
position: 334342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333637-333658:-1:exon

position:333637:-1
position: 333637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333658:-1
position: 333658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333282-333340:-1:exon

position:333282:-1
position: 333282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333340:-1
position: 333340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:332698-332817:-1:exon

position:332698:-1
position: 332698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332817:-1
position: 332817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:332490-332594:-1:exon

position:332490:-1
position: 332490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332594:-1
position: 332594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:332342-332346:-1:exon

position:332342:-1
position: 332342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332346:-1
position: 332346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:329522-329615:-1:exon

position:329522:-1
position: 329522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329615:-1
position: 329615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:329257-329413:-1:exon

position:329257:-1
position: 329257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329413:-1
position: 329413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:329061-329167:-1:exon

position:329061:-1
position: 329061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329167:-1
position: 329167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:328554-328941:-1:exon

position:328941:-1
position: 328941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: TIMM50
product: translocase of inner mitochondrial membrane 50, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_037371923.1
SIO_010081: TIMM50
subclass of: SO_0000673
so part of: TIMM50
location: complement(join(328554..328941,329061..329167,329257..329413,332297..332370,332490..332594,332698..332817,333282..333340,333637..333658,334311..334342,334431..334587,335162..335326))
location: region:328554-335326:-1
so has part: feature:335162-335326:-1:exon
so has part: feature:334431-334587:-1:exon
so has part: feature:334311-334342:-1:exon
so has part: feature:333637-333658:-1:exon
so has part: feature:333282-333340:-1:exon
so has part: feature:332698-332817:-1:exon
so has part: feature:332490-332594:-1:exon
so has part: feature:332297-332370:-1:exon
so has part: feature:329257-329413:-1:exon
so has part: feature:329061-329167:-1:exon
so has part: feature:328554-328941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335162-335326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334431-334587:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334311-334342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333637-333658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333282-333340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332698-332817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332490-332594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332297-332370:-1:exon

position:332297:-1
position: 332297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332370:-1
position: 332370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:329257-329413:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329061-329167:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:328554-328941:-1:exon

TIMM50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: TIMM50
product: translocase of inner mitochondrial membrane 50, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_037371925.1
SIO_010081: TIMM50
subclass of: SO_0000673
so part of: TIMM50
location: complement(join(328554..328941,329061..329167,329257..329413,332297..332392,332490..332594,332698..332817,333282..333340,333637..333658,334311..334342,334431..334587,335162..335326))
location: region:328554-335326:-1
so has part: feature:335162-335326:-1:exon
so has part: feature:334431-334587:-1:exon
so has part: feature:334311-334342:-1:exon
so has part: feature:333637-333658:-1:exon
so has part: feature:333282-333340:-1:exon
so has part: feature:332698-332817:-1:exon
so has part: feature:332490-332594:-1:exon
so has part: feature:332297-332392:-1:exon
so has part: feature:329257-329413:-1:exon
so has part: feature:329061-329167:-1:exon
so has part: feature:328554-328941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335162-335326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334431-334587:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334311-334342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333637-333658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333282-333340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332698-332817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332490-332594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332297-332392:-1:exon

position:332392:-1
position: 332392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:329257-329413:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329061-329167:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:328554-328941:-1:exon

TIMM50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: TIMM50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit TIM50 isoform X1
translation: MAAAAAGRALAACGARAALGARRARTALGRAASGAAGTEAVLRERLRRHQAAEGPLGPPPGPEQEEEEEQRRRARMAAARRLALRVAGLLGAGTSVALIYIFGSNAVDEHGAKIPDEFDGDPVGIQQLRRTYKYFKDYRQMIIEPTSPKLLPDPLREPYYQPPYTLVIELTDVLLHPEWSLVTGWRFKKRPGIESLLQQLAPLYEIVIFTSETGMRGPSRLRPTASSVTPPVTWTVTTSRIFPASTETRRRWWWWIAGEKLFACSPTTGWRCPAGTAAPTTARSTTSPLSSKPSRLAGWKMSGRCWKITRWRRILWQLLNVVARSWRRRSSSAWPSWHRARSRRGFSWVPWPGASGRAPSSSDVSGDVIALGP
SIO_010081: TIMM50
subclass of: SO_0000673
so part of: TIMM50
location: complement(join(328803..328941,329061..329167,329257..329413,332297..332370,332490..332594,332698..332817,333282..333340,333637..333658,334311..334342,334431..334587,335162..335311))
location: region:328803-335311:-1
so has part: feature:335162-335311:-1:exon
so has part: feature:334431-334587:-1:exon
so has part: feature:334311-334342:-1:exon
so has part: feature:333637-333658:-1:exon
so has part: feature:333282-333340:-1:exon
so has part: feature:332698-332817:-1:exon
so has part: feature:332490-332594:-1:exon
so has part: feature:332297-332370:-1:exon
so has part: feature:329257-329413:-1:exon
so has part: feature:329061-329167:-1:exon
so has part: feature:328803-328941:-1:exon

XP_037227820.1
type: Protein
SIO_000068: ncbiprotein

position:328803:-1
position: 328803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335311:-1
position: 335311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335162-335311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334431-334587:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334311-334342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333637-333658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333282-333340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332698-332817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332490-332594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332297-332370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:329257-329413:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329061-329167:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:328803-328941:-1:exon

TIMM50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: TIMM50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit TIM50 isoform X2
translation: MAAAAAGRALAACGARAALGARRARTALGRAASGAAGTEAVLRERLRRHQAAEGPLGPPPGPEQEEEEEQRRRARMAAARRLALRVAGLLGAGTSVALIYIFGSNAVDEHGAKIPDEFDGDPVGIQQLRRTYKYFKDYRQMIIEPTSPKLLPDPLREPYYQPPYTLVIELTDVLLHPEWSLVTGWRFKKRPGIESLLQQLAPLYEIVIFTSETGMTAFPLIDSVDPHGFVSYRLFRDATRYMDGHHVKDISCLNRDPAKVVVVDCRREAFCLQPYNGLALPRWDGSSDDRALYDLTAFLKTIALSGVEDVRTVLENYALEEDPLAAFKRRRSQLEEEEQQRLAELAQGKKPTGLFLGALAGRLWPRSKQQ
SIO_010081: TIMM50
subclass of: SO_0000673
so part of: TIMM50
location: complement(join(328837..328941,329061..329167,329257..329413,329522..329615,332342..332346,332490..332594,332698..332817,333282..333340,333637..333658,334311..334342,334431..334587,335162..335311))
location: region:328837-335311:-1
so has part: feature:335162-335311:-1:exon
so has part: feature:334431-334587:-1:exon
so has part: feature:334311-334342:-1:exon
so has part: feature:333637-333658:-1:exon
so has part: feature:333282-333340:-1:exon
so has part: feature:332698-332817:-1:exon
so has part: feature:332490-332594:-1:exon
so has part: feature:332342-332346:-1:exon
so has part: feature:329522-329615:-1:exon
so has part: feature:329257-329413:-1:exon
so has part: feature:329061-329167:-1:exon
so has part: feature:328837-328941:-1:exon

XP_037227821.1
type: Protein
SIO_000068: ncbiprotein

position:328837:-1
position: 328837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335162-335311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334431-334587:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334311-334342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333637-333658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333282-333340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332698-332817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332490-332594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332342-332346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:329522-329615:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329257-329413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:329061-329167:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:328837-328941:-1:exon

TIMM50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: TIMM50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit TIM50 isoform X3
translation: MAAAAAGRALAACGARAALGARRARTALGRAASGAAGTEAVLRERLRRHQAAEGPLGPPPGPEQEEEEEQRRRARMAAARRLALRVAGLLGAGTSVALIYIFGSNAVDEHGAKIPDEFDGDPVGIQQLRRTYKYFKDYRQMIIEPTSPKLLPDPLREPYYQPPYTLVIELTDVLLHPEWSLVTGWRFKKRPGIESLLQQLAPLYEIVIFTSETGMTAFPSSTAWTLTASSYRLFRDATRYMDGHHVKDISCLNRDPAKVVVVDCRREAFCLQPYNGLALPRWDGSSDDRALYDLTAFLKTIALSGVEDVRTVLENYALEEDPLAAFKRRRSQLEEEEQQRLAELAQGKKPTGLFLGALAGRLWPRSKQQ
SIO_010081: TIMM50
subclass of: SO_0000673
so part of: TIMM50
location: complement(join(328837..328941,329061..329167,329257..329413,332297..332392,332490..332594,332698..332817,333282..333340,333637..333658,334311..334342,334431..334587,335162..335311))
location: region:328837-335311:-1
so has part: feature:335162-335311:-1:exon
so has part: feature:334431-334587:-1:exon
so has part: feature:334311-334342:-1:exon
so has part: feature:333637-333658:-1:exon
so has part: feature:333282-333340:-1:exon
so has part: feature:332698-332817:-1:exon
so has part: feature:332490-332594:-1:exon
so has part: feature:332297-332392:-1:exon
so has part: feature:329257-329413:-1:exon
so has part: feature:329061-329167:-1:exon
so has part: feature:328837-328941:-1:exon

XP_037227822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335162-335311:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334431-334587:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334311-334342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333637-333658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333282-333340:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332698-332817:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332490-332594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332297-332392:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:329257-329413:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329061-329167:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:328837-328941:-1:exon

SUPT5H
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: SUPT5H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(336005..345456)
location: region:336005-345456:-1
so has part: feature:336005-345456:-1:exon
subclass of: SO_0000010

119140498
type: Gene
SIO_000068: ncbigene

position:336005:-1
position: 336005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345456:-1
position: 345456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336005-345456:-1:exon

SUPT5H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: SUPT5H
product: SPT5 homolog, DSIF elongation factor subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_037371899.1
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(336005..336290,336509..336604,336723..336926,337439..337607,338377..338535,338670..338775,338903..339030,339293..339395,339493..339597,339677..339761,339885..340010,340414..340560,340715..340861,340983..341138,341234..341370,341442..341535,341936..342041,342183..342253,342330..342419,342511..342762,342857..342925,343016..343046,343147..343212,343333..343401,343502..343571,344352..344417,344501..344660,344753..344852,345227..345456))
location: region:336005-345456:-1
so has part: feature:345227-345456:-1:exon
so has part: feature:344753-344852:-1:exon
so has part: feature:344501-344660:-1:exon
so has part: feature:344352-344417:-1:exon
so has part: feature:343502-343571:-1:exon
so has part: feature:343333-343401:-1:exon
so has part: feature:343147-343212:-1:exon
so has part: feature:343016-343046:-1:exon
so has part: feature:342857-342925:-1:exon
so has part: feature:342511-342762:-1:exon
so has part: feature:342330-342419:-1:exon
so has part: feature:342183-342253:-1:exon
so has part: feature:341936-342041:-1:exon
so has part: feature:341442-341535:-1:exon
so has part: feature:341234-341370:-1:exon
so has part: feature:340983-341138:-1:exon
so has part: feature:340715-340861:-1:exon
so has part: feature:340414-340560:-1:exon
so has part: feature:339885-340010:-1:exon
so has part: feature:339677-339761:-1:exon
so has part: feature:339493-339597:-1:exon
so has part: feature:339293-339395:-1:exon
so has part: feature:338903-339030:-1:exon
so has part: feature:338670-338775:-1:exon
so has part: feature:338377-338535:-1:exon
so has part: feature:337439-337607:-1:exon
so has part: feature:336723-336926:-1:exon
so has part: feature:336509-336604:-1:exon
so has part: feature:336005-336290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345227-345456:-1:exon

position:345227:-1
position: 345227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:344753-344852:-1:exon

position:344753:-1
position: 344753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344852:-1
position: 344852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344501-344660:-1:exon

position:344501:-1
position: 344501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344660:-1
position: 344660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:344352-344417:-1:exon

position:344352:-1
position: 344352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344417:-1
position: 344417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:343502-343571:-1:exon

position:343502:-1
position: 343502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343571:-1
position: 343571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:343333-343401:-1:exon

position:343333:-1
position: 343333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343401:-1
position: 343401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:343147-343212:-1:exon

position:343147:-1
position: 343147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343212:-1
position: 343212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:343016-343046:-1:exon

position:343016:-1
position: 343016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343046:-1
position: 343046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:342857-342925:-1:exon

position:342857:-1
position: 342857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342925:-1
position: 342925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:342511-342762:-1:exon

position:342511:-1
position: 342511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342762:-1
position: 342762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:342330-342419:-1:exon

position:342330:-1
position: 342330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342419:-1
position: 342419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:342183-342253:-1:exon

position:342183:-1
position: 342183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342253:-1
position: 342253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:341936-342041:-1:exon

position:341936:-1
position: 341936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342041:-1
position: 342041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:341442-341535:-1:exon

position:341442:-1
position: 341442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341535:-1
position: 341535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:341234-341370:-1:exon

position:341234:-1
position: 341234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341370:-1
position: 341370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:340983-341138:-1:exon

position:340983:-1
position: 340983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341138:-1
position: 341138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:340715-340861:-1:exon

position:340715:-1
position: 340715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340861:-1
position: 340861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:340414-340560:-1:exon

position:340414:-1
position: 340414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340560:-1
position: 340560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:339885-340010:-1:exon

position:339885:-1
position: 339885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340010:-1
position: 340010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:339677-339761:-1:exon

position:339677:-1
position: 339677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339761:-1
position: 339761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:339493-339597:-1:exon

position:339493:-1
position: 339493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339597:-1
position: 339597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:339293-339395:-1:exon

position:339293:-1
position: 339293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339395:-1
position: 339395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:338903-339030:-1:exon

position:338903:-1
position: 338903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339030:-1
position: 339030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:338670-338775:-1:exon

position:338670:-1
position: 338670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338775:-1
position: 338775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:338377-338535:-1:exon

position:338377:-1
position: 338377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338535:-1
position: 338535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:337439-337607:-1:exon

position:337439:-1
position: 337439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337607:-1
position: 337607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:336723-336926:-1:exon

position:336723:-1
position: 336723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336926:-1
position: 336926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:336509-336604:-1:exon

position:336509:-1
position: 336509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336604:-1
position: 336604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:336005-336290:-1:exon

position:336290:-1
position: 336290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT5H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: SUPT5H
product: SPT5 homolog, DSIF elongation factor subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_037371898.1
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(336005..336290,336509..336604,336723..336926,337439..337607,338377..338535,338670..338775,338903..339030,339293..339395,339493..339597,339677..339761,339885..340010,340414..340560,340715..340861,340983..341138,341234..341370,341442..341535,341936..342041,342183..342253,342330..342419,342511..342762,342857..342925,343016..343046,343147..343212,343333..343401,343502..343571,343709..343720,344352..344417,344501..344660,344753..344852,345227..345456))
location: region:336005-345456:-1
so has part: feature:345227-345456:-1:exon
so has part: feature:344753-344852:-1:exon
so has part: feature:344501-344660:-1:exon
so has part: feature:344352-344417:-1:exon
so has part: feature:343709-343720:-1:exon
so has part: feature:343502-343571:-1:exon
so has part: feature:343333-343401:-1:exon
so has part: feature:343147-343212:-1:exon
so has part: feature:343016-343046:-1:exon
so has part: feature:342857-342925:-1:exon
so has part: feature:342511-342762:-1:exon
so has part: feature:342330-342419:-1:exon
so has part: feature:342183-342253:-1:exon
so has part: feature:341936-342041:-1:exon
so has part: feature:341442-341535:-1:exon
so has part: feature:341234-341370:-1:exon
so has part: feature:340983-341138:-1:exon
so has part: feature:340715-340861:-1:exon
so has part: feature:340414-340560:-1:exon
so has part: feature:339885-340010:-1:exon
so has part: feature:339677-339761:-1:exon
so has part: feature:339493-339597:-1:exon
so has part: feature:339293-339395:-1:exon
so has part: feature:338903-339030:-1:exon
so has part: feature:338670-338775:-1:exon
so has part: feature:338377-338535:-1:exon
so has part: feature:337439-337607:-1:exon
so has part: feature:336723-336926:-1:exon
so has part: feature:336509-336604:-1:exon
so has part: feature:336005-336290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345227-345456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344753-344852:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344501-344660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344352-344417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343709-343720:-1:exon

position:343709:-1
position: 343709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343720:-1
position: 343720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:343502-343571:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343333-343401:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343147-343212:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343016-343046:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342857-342925:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342511-342762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:342330-342419:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:342183-342253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341936-342041:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341442-341535:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:341234-341370:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:340983-341138:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:340715-340861:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:340414-340560:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:339885-340010:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:339677-339761:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:339493-339597:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:339293-339395:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:338903-339030:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:338670-338775:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:338377-338535:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:337439-337607:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:336723-336926:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:336509-336604:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:336005-336290:-1:exon

SUPT5H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: SUPT5H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor SPT5 isoform X2
translation: MSDSDDSNFSEDESERSSEAEEAEENEAEEERASAAGSEKEEAEEEEEEEEEEYDEEEEEEDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGGFAPMSPRISSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQGYGGTPNPQTPGYPDPSSPQVNQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQSSSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHLEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLEEQLKILNLRFLGKLLEA
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(336147..336290,336509..336604,336723..336926,337439..337607,338377..338535,338670..338775,338903..339030,339293..339395,339493..339597,339677..339761,339885..340010,340414..340560,340715..340861,340983..341138,341234..341370,341442..341535,341936..342041,342183..342253,342330..342419,342511..342762,342857..342925,343016..343046,343147..343212,343333..343401,343502..343571,344352..344417,344501..344660,344753..344833))
location: region:336147-344833:-1
so has part: feature:344753-344833:-1:exon
so has part: feature:344501-344660:-1:exon
so has part: feature:344352-344417:-1:exon
so has part: feature:343502-343571:-1:exon
so has part: feature:343333-343401:-1:exon
so has part: feature:343147-343212:-1:exon
so has part: feature:343016-343046:-1:exon
so has part: feature:342857-342925:-1:exon
so has part: feature:342511-342762:-1:exon
so has part: feature:342330-342419:-1:exon
so has part: feature:342183-342253:-1:exon
so has part: feature:341936-342041:-1:exon
so has part: feature:341442-341535:-1:exon
so has part: feature:341234-341370:-1:exon
so has part: feature:340983-341138:-1:exon
so has part: feature:340715-340861:-1:exon
so has part: feature:340414-340560:-1:exon
so has part: feature:339885-340010:-1:exon
so has part: feature:339677-339761:-1:exon
so has part: feature:339493-339597:-1:exon
so has part: feature:339293-339395:-1:exon
so has part: feature:338903-339030:-1:exon
so has part: feature:338670-338775:-1:exon
so has part: feature:338377-338535:-1:exon
so has part: feature:337439-337607:-1:exon
so has part: feature:336723-336926:-1:exon
so has part: feature:336509-336604:-1:exon
so has part: feature:336147-336290:-1:exon

XP_037227796.1
type: Protein
SIO_000068: ncbiprotein

position:336147:-1
position: 336147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344833:-1
position: 344833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344753-344833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344501-344660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344352-344417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343502-343571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343333-343401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343147-343212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343016-343046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342857-342925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342511-342762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342330-342419:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342183-342253:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:341936-342041:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341442-341535:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341234-341370:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:340983-341138:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:340715-340861:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:340414-340560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:339885-340010:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:339677-339761:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:339493-339597:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:339293-339395:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:338903-339030:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:338670-338775:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:338377-338535:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:337439-337607:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:336723-336926:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:336509-336604:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:336147-336290:-1:exon

SUPT5H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: SUPT5H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor SPT5 isoform X1
translation: MSDSDDSNFSEDESERSSEAEEAEENEAEEERASAAGSEKEEAEEEEEEEEEEYDEEEEEEDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGGFAPMSPRISSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQGYGGTPNPQTPGYPDPSSPQVNQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQSSSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHLEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLEEQLKILNLRFLGKLLEA
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(336147..336290,336509..336604,336723..336926,337439..337607,338377..338535,338670..338775,338903..339030,339293..339395,339493..339597,339677..339761,339885..340010,340414..340560,340715..340861,340983..341138,341234..341370,341442..341535,341936..342041,342183..342253,342330..342419,342511..342762,342857..342925,343016..343046,343147..343212,343333..343401,343502..343571,343709..343720,344352..344417,344501..344660,344753..344833))
location: region:336147-344833:-1
so has part: feature:344753-344833:-1:exon
so has part: feature:344501-344660:-1:exon
so has part: feature:344352-344417:-1:exon
so has part: feature:343709-343720:-1:exon
so has part: feature:343502-343571:-1:exon
so has part: feature:343333-343401:-1:exon
so has part: feature:343147-343212:-1:exon
so has part: feature:343016-343046:-1:exon
so has part: feature:342857-342925:-1:exon
so has part: feature:342511-342762:-1:exon
so has part: feature:342330-342419:-1:exon
so has part: feature:342183-342253:-1:exon
so has part: feature:341936-342041:-1:exon
so has part: feature:341442-341535:-1:exon
so has part: feature:341234-341370:-1:exon
so has part: feature:340983-341138:-1:exon
so has part: feature:340715-340861:-1:exon
so has part: feature:340414-340560:-1:exon
so has part: feature:339885-340010:-1:exon
so has part: feature:339677-339761:-1:exon
so has part: feature:339493-339597:-1:exon
so has part: feature:339293-339395:-1:exon
so has part: feature:338903-339030:-1:exon
so has part: feature:338670-338775:-1:exon
so has part: feature:338377-338535:-1:exon
so has part: feature:337439-337607:-1:exon
so has part: feature:336723-336926:-1:exon
so has part: feature:336509-336604:-1:exon
so has part: feature:336147-336290:-1:exon

XP_037227795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344753-344833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344501-344660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344352-344417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343709-343720:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343502-343571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343333-343401:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343147-343212:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343016-343046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342857-342925:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342511-342762:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342330-342419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:342183-342253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:341936-342041:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:341442-341535:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341234-341370:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:340983-341138:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:340715-340861:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:340414-340560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:339885-340010:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:339677-339761:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:339493-339597:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:339293-339395:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:338903-339030:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:338670-338775:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:338377-338535:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:337439-337607:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:336723-336926:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:336509-336604:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:336147-336290:-1:exon

MED29
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: MED29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(345670..347968)
location: region:345670-347968:-1
so has part: feature:345670-347968:-1:exon
subclass of: SO_0000010

119140499
type: Gene
SIO_000068: ncbigene

position:345670:-1
position: 345670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347968:-1
position: 347968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345670-347968:-1:exon

MED29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: MED29
product: mediator complex subunit 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_037371900.1
SIO_010081: MED29
subclass of: SO_0000673
so part of: MED29
location: complement(join(345670..346422,346827..346911,347222..347280,347697..347968))
location: region:345670-347968:-1
so has part: feature:347697-347968:-1:exon
so has part: feature:347222-347280:-1:exon
so has part: feature:346827-346911:-1:exon
so has part: feature:345670-346422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347697-347968:-1:exon

position:347697:-1
position: 347697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347222-347280:-1:exon

position:347222:-1
position: 347222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347280:-1
position: 347280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346827-346911:-1:exon

position:346827:-1
position: 346827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346911:-1
position: 346911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:345670-346422:-1:exon

position:346422:-1
position: 346422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: MED29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 29
translation: MAAPSQQAAPGTGPGQAAAPPAPPPLPAAPGPGAGPGQPPGPGQPPGPGAALPGQVAAAQAQDFDPVQRFRLLIPQLKESLQTLMKVAAQNLVQNSSIDNGQKSADGALQRFDKSLEEFYALCDQLELCLRLAHECLSQSFDSAKHAPALVPAAPKGEGGGGETLPYTQYLPLIKAQIAGAKDIHNALLEGANKITGKLPPPGGP
SIO_010081: MED29
subclass of: SO_0000673
so part of: MED29
location: complement(join(346195..346422,346827..346911,347222..347280,347697..347942))
location: region:346195-347942:-1
so has part: feature:347697-347942:-1:exon
so has part: feature:347222-347280:-1:exon
so has part: feature:346827-346911:-1:exon
so has part: feature:346195-346422:-1:exon

XP_037227797.1
type: Protein
SIO_000068: ncbiprotein

position:346195:-1
position: 346195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347942:-1
position: 347942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347697-347942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347222-347280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346827-346911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346195-346422:-1:exon

PAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: PAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 347997..353357
location: region:347997-353357:1
so has part: feature:347997-353357:1:exon
subclass of: SO_0000010

119140524
type: Gene
SIO_000068: ncbigene

position:347997:1
position: 347997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353357:1
position: 353357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347997-353357:1:exon

PAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAF1
product: PAF1 homolog, Paf1/RNA polymerase II complex component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371946.1
SIO_010081: PAF1
subclass of: SO_0000673
so part of: PAF1
location: join(347997..348110,348812..348841,349311..349403,349900..350021,350286..350352,350474..350575,350665..350770,350901..350969,351262..351365,351461..351577,351846..351974,352394..352523,352773..353357)
location: region:347997-353357:1
so has part: feature:347997-348110:1:exon
so has part: feature:348812-348841:1:exon
so has part: feature:349311-349403:1:exon
so has part: feature:349900-350021:1:exon
so has part: feature:350286-350352:1:exon
so has part: feature:350474-350575:1:exon
so has part: feature:350665-350770:1:exon
so has part: feature:350901-350969:1:exon
so has part: feature:351262-351365:1:exon
so has part: feature:351461-351577:1:exon
so has part: feature:351846-351974:1:exon
so has part: feature:352394-352523:1:exon
so has part: feature:352773-353357:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347997-348110:1:exon

position:348110:1
position: 348110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:348812-348841:1:exon

position:348812:1
position: 348812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348841:1
position: 348841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:349311-349403:1:exon

position:349311:1
position: 349311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349403:1
position: 349403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:349900-350021:1:exon

position:349900:1
position: 349900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350021:1
position: 350021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:350286-350352:1:exon

position:350286:1
position: 350286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350352:1
position: 350352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:350474-350575:1:exon

position:350474:1
position: 350474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350575:1
position: 350575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:350665-350770:1:exon

position:350665:1
position: 350665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350770:1
position: 350770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:350901-350969:1:exon

position:350901:1
position: 350901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350969:1
position: 350969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:351262-351365:1:exon

position:351262:1
position: 351262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351365:1
position: 351365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:351461-351577:1:exon

position:351461:1
position: 351461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351577:1
position: 351577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:351846-351974:1:exon

position:351846:1
position: 351846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351974:1
position: 351974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:352394-352523:1:exon

position:352394:1
position: 352394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352523:1
position: 352523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:352773-353357:1:exon

position:352773:1
position: 352773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II-associated factor 1 homolog
translation: MAPTIQTQAQREEPGHRPSSHRTLPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPSVLLDPADEKLLEEEIQAPTSSKRSQQHAKVVPWMRKTEYISTEFNRYGVSNEKPEVKIGVSVKQQFTEEEIYKDRDSQIAAIEKTFEDAQKAITQHYSKPRVTPIEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGPAALEMMSQAMIRGMMDEEGNQFVAYFLPVEETLRKRKRDQEEEMDYAPEDVYDYKIAREYNWNVKNKASKGYEENYFFIFREGDGVYYNELETRVRLSKRRARAGVQSGTNAVLVVKHRDMNEKELEAQVPLFGEGGAAAPRSPSSGVWELGRLPHPRRPHHNNVPSLPRRRRPPPSSPSRPRGRCPPRSAGPATAAATWRLTPPHRLRHAPIGPPLRHSRRDSQTIGLPRCSSADRTALRRHWARQPAGLVVIRPRFCPLTALTPSIGRQPHPAARPPSWLGRTAACLSDAPPFFMTQHSDTAFVYRLPGCSQKAFQHRLVRLLVKGNAN
SIO_010081: PAF1
subclass of: SO_0000673
so part of: PAF1
location: join(348061..348110,348812..348841,349311..349403,349900..350021,350286..350352,350474..350575,350665..350770,350901..350969,351262..351365,351461..351577,351846..351974,352394..352523,352773..353357)
location: region:348061-353357:1
so has part: feature:348061-348110:1:exon
so has part: feature:348812-348841:1:exon
so has part: feature:349311-349403:1:exon
so has part: feature:349900-350021:1:exon
so has part: feature:350286-350352:1:exon
so has part: feature:350474-350575:1:exon
so has part: feature:350665-350770:1:exon
so has part: feature:350901-350969:1:exon
so has part: feature:351262-351365:1:exon
so has part: feature:351461-351577:1:exon
so has part: feature:351846-351974:1:exon
so has part: feature:352394-352523:1:exon
so has part: feature:352773-353357:1:exon

XP_037227843.1
type: Protein
SIO_000068: ncbiprotein

position:348061:1
position: 348061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348061-348110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348812-348841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349311-349403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:349900-350021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350286-350352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350474-350575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350665-350770:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:350901-350969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:351262-351365:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:351461-351577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:351846-351974:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:352394-352523:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352773-353357:1:exon

SIRT2
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: SIRT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354234..357949)
location: region:354234-357949:-1
so has part: feature:354234-357949:-1:exon
subclass of: SO_0000010

119140515
type: Gene
SIO_000068: ncbigene

position:354234:-1
position: 354234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357949:-1
position: 357949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354234-357949:-1:exon

SIRT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: SIRT2
product: sirtuin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_037371935.1
SIO_010081: SIRT2
subclass of: SO_0000673
so part of: SIRT2
location: complement(join(354234..354447,354563..354629,355262..355329,355415..355466,355544..355620,355759..355814,355924..355983,356374..356503,356609..356677,356801..356857,356967..357073,357174..357215,357319..357435,357527..357566,357679..357725,357828..357949))
location: region:354234-357949:-1
so has part: feature:357828-357949:-1:exon
so has part: feature:357679-357725:-1:exon
so has part: feature:357527-357566:-1:exon
so has part: feature:357319-357435:-1:exon
so has part: feature:357174-357215:-1:exon
so has part: feature:356967-357073:-1:exon
so has part: feature:356801-356857:-1:exon
so has part: feature:356609-356677:-1:exon
so has part: feature:356374-356503:-1:exon
so has part: feature:355924-355983:-1:exon
so has part: feature:355759-355814:-1:exon
so has part: feature:355544-355620:-1:exon
so has part: feature:355415-355466:-1:exon
so has part: feature:355262-355329:-1:exon
so has part: feature:354563-354629:-1:exon
so has part: feature:354234-354447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357828-357949:-1:exon

position:357828:-1
position: 357828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357679-357725:-1:exon

position:357679:-1
position: 357679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357725:-1
position: 357725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:357527-357566:-1:exon

position:357527:-1
position: 357527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357566:-1
position: 357566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:357319-357435:-1:exon

position:357319:-1
position: 357319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357435:-1
position: 357435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:357174-357215:-1:exon

position:357174:-1
position: 357174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357215:-1
position: 357215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:356967-357073:-1:exon

position:356967:-1
position: 356967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357073:-1
position: 357073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:356801-356857:-1:exon

position:356801:-1
position: 356801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356857:-1
position: 356857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:356609-356677:-1:exon

position:356609:-1
position: 356609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356677:-1
position: 356677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:356374-356503:-1:exon

position:356374:-1
position: 356374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356503:-1
position: 356503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:355924-355983:-1:exon

position:355924:-1
position: 355924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355983:-1
position: 355983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:355759-355814:-1:exon

position:355759:-1
position: 355759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355814:-1
position: 355814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:355544-355620:-1:exon

position:355544:-1
position: 355544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355620:-1
position: 355620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:355415-355466:-1:exon

position:355415:-1
position: 355415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355466:-1
position: 355466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:355262-355329:-1:exon

position:355262:-1
position: 355262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355329:-1
position: 355329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:354563-354629:-1:exon

position:354563:-1
position: 354563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354629:-1
position: 354629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:354234-354447:-1:exon

position:354447:-1
position: 354447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIRT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: SIRT2
product: sirtuin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037371934.1
SIO_010081: SIRT2
subclass of: SO_0000673
so part of: SIRT2
location: complement(join(354234..354447,354563..354629,355262..355329,355415..355466,355544..355620,355759..355814,355924..355983,356374..356503,356609..356677,356801..356857,356967..357073,357174..357215,357319..357435,357527..357566,357679..357725,357822..357867))
location: region:354234-357867:-1
so has part: feature:357822-357867:-1:exon
so has part: feature:357679-357725:-1:exon
so has part: feature:357527-357566:-1:exon
so has part: feature:357319-357435:-1:exon
so has part: feature:357174-357215:-1:exon
so has part: feature:356967-357073:-1:exon
so has part: feature:356801-356857:-1:exon
so has part: feature:356609-356677:-1:exon
so has part: feature:356374-356503:-1:exon
so has part: feature:355924-355983:-1:exon
so has part: feature:355759-355814:-1:exon
so has part: feature:355544-355620:-1:exon
so has part: feature:355415-355466:-1:exon
so has part: feature:355262-355329:-1:exon
so has part: feature:354563-354629:-1:exon
so has part: feature:354234-354447:-1:exon

position:357867:-1
position: 357867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357822-357867:-1:exon

position:357822:-1
position: 357822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357679-357725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357527-357566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357319-357435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357174-357215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356967-357073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356801-356857:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356609-356677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356374-356503:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:355924-355983:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:355759-355814:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355544-355620:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355415-355466:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355262-355329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354563-354629:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354234-354447:-1:exon

SIRT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: SIRT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-2 isoform X2
translation: MAEPEAPGACGDEAEQDAESPTSDTEPGASGDSDMELLRNLLSRTLGLGGEKPEKVLEELTLEGVSRFLQSDRCKNIVCMVGAGISTSAGIPDFRSPGTGLYANLQSYDLPYPEAIFEISFFKQNPEPFFALARELYPGQFKPTVCHYFMRLLQEKGLLLRCYTQNIDTLERVAGLEPERLVEAHGTFFSSHCLRPGCRQHYGLRWMEERIFSSLVPRCEKCQSVVKPDIVFFGESLPSRFFTLLQSDFQKVDLLIIMGTSLQVQPFASLVSRVPTNTPRLLINKEKTGQSDPLMSLMGFGCGMDFDSEKAYRDVAWLGECDAGCLALADLLGWKKELEELVKKEHAAIDAKARGGRGKARGGPPEPGGGGHEARGGPSEAGGSSHDPTP
SIO_010081: SIRT2
subclass of: SO_0000673
so part of: SIRT2
location: complement(join(354280..354447,354563..354629,355262..355329,355415..355466,355544..355620,355759..355814,355924..355983,356374..356503,356609..356677,356801..356857,356967..357073,357174..357215,357319..357435,357527..357566,357679..357725,357828..357843))
location: region:354280-357843:-1
so has part: feature:357828-357843:-1:exon
so has part: feature:357679-357725:-1:exon
so has part: feature:357527-357566:-1:exon
so has part: feature:357319-357435:-1:exon
so has part: feature:357174-357215:-1:exon
so has part: feature:356967-357073:-1:exon
so has part: feature:356801-356857:-1:exon
so has part: feature:356609-356677:-1:exon
so has part: feature:356374-356503:-1:exon
so has part: feature:355924-355983:-1:exon
so has part: feature:355759-355814:-1:exon
so has part: feature:355544-355620:-1:exon
so has part: feature:355415-355466:-1:exon
so has part: feature:355262-355329:-1:exon
so has part: feature:354563-354629:-1:exon
so has part: feature:354280-354447:-1:exon

XP_037227832.1
type: Protein
SIO_000068: ncbiprotein

position:354280:-1
position: 354280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357843:-1
position: 357843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357828-357843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357679-357725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357527-357566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357319-357435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357174-357215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356967-357073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356801-356857:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356609-356677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356374-356503:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:355924-355983:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:355759-355814:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355544-355620:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355415-355466:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355262-355329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354563-354629:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354280-354447:-1:exon

SIRT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: SIRT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-2 isoform X1
translation: MAEPEGNAPGACGDEAEQDAESPTSDTEPGASGDSDMELLRNLLSRTLGLGGEKPEKVLEELTLEGVSRFLQSDRCKNIVCMVGAGISTSAGIPDFRSPGTGLYANLQSYDLPYPEAIFEISFFKQNPEPFFALARELYPGQFKPTVCHYFMRLLQEKGLLLRCYTQNIDTLERVAGLEPERLVEAHGTFFSSHCLRPGCRQHYGLRWMEERIFSSLVPRCEKCQSVVKPDIVFFGESLPSRFFTLLQSDFQKVDLLIIMGTSLQVQPFASLVSRVPTNTPRLLINKEKTGQSDPLMSLMGFGCGMDFDSEKAYRDVAWLGECDAGCLALADLLGWKKELEELVKKEHAAIDAKARGGRGKARGGPPEPGGGGHEARGGPSEAGGSSHDPTP
SIO_010081: SIRT2
subclass of: SO_0000673
so part of: SIRT2
location: complement(join(354280..354447,354563..354629,355262..355329,355415..355466,355544..355620,355759..355814,355924..355983,356374..356503,356609..356677,356801..356857,356967..357073,357174..357215,357319..357435,357527..357566,357679..357725,357822..357843))
location: region:354280-357843:-1
so has part: feature:357822-357843:-1:exon
so has part: feature:357679-357725:-1:exon
so has part: feature:357527-357566:-1:exon
so has part: feature:357319-357435:-1:exon
so has part: feature:357174-357215:-1:exon
so has part: feature:356967-357073:-1:exon
so has part: feature:356801-356857:-1:exon
so has part: feature:356609-356677:-1:exon
so has part: feature:356374-356503:-1:exon
so has part: feature:355924-355983:-1:exon
so has part: feature:355759-355814:-1:exon
so has part: feature:355544-355620:-1:exon
so has part: feature:355415-355466:-1:exon
so has part: feature:355262-355329:-1:exon
so has part: feature:354563-354629:-1:exon
so has part: feature:354280-354447:-1:exon

XP_037227831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357822-357843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357679-357725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357527-357566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357319-357435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357174-357215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356967-357073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356801-356857:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356609-356677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356374-356503:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:355924-355983:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:355759-355814:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:355544-355620:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:355415-355466:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:355262-355329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354563-354629:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354280-354447:-1:exon

NFKBIB
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: NFKBIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 358213..361092
location: region:358213-361092:1
so has part: feature:358213-361092:1:exon
subclass of: SO_0000010

119140504
type: Gene
SIO_000068: ncbigene

position:358213:1
position: 358213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361092:1
position: 361092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358213-361092:1:exon

NFKBIB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: NFKBIB
product: NFKB inhibitor beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_037371908.1
SIO_010081: NFKBIB
subclass of: SO_0000673
so part of: NFKBIB
location: join(358213..358581,359196..359301,359412..359640,360262..360350,360446..360691,360849..361092)
location: region:358213-361092:1
so has part: feature:358213-358581:1:exon
so has part: feature:359196-359301:1:exon
so has part: feature:359412-359640:1:exon
so has part: feature:360262-360350:1:exon
so has part: feature:360446-360691:1:exon
so has part: feature:360849-361092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358213-358581:1:exon

position:358581:1
position: 358581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359196-359301:1:exon

position:359196:1
position: 359196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359301:1
position: 359301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359412-359640:1:exon

position:359412:1
position: 359412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359640:1
position: 359640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:360262-360350:1:exon

position:360262:1
position: 360262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360350:1
position: 360350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:360446-360691:1:exon

position:360446:1
position: 360446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360691:1
position: 360691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:360849-361092:1:exon

position:360849:1
position: 360849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFKBIB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: NFKBIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NF-kappa-B inhibitor beta
translation: MAAAAEAAAAPPPGEVKRTEGDEWCDSGLGSLGEGQLGPFPASPGPASPGPALGSVGAAEGAQEAGEAPAAVGGDPTAWLRHVLGFLTEDGDTALHLAVIHEHEAFLDSILQYTGGTEYLDLQNDLGQTALHIAVILGLSGFVRKLRAAGAGLCLQERGGHTALHLACREGRRGCARHLLGTPPAPPARHQEEARAQLDSVNYDGYTPLHVAVLRKDLEMVELLLSAGADLNKAEPSCGRSPLHLAVEAQSPEVAECLLRAGADPAARMYVGYTPLYSARHRPDPRLPQLLRRFGAQDPPGDSDDSPDEGEGDNSDEEYDDIVINSGRCVD
SIO_010081: NFKBIB
subclass of: SO_0000673
so part of: NFKBIB
location: join(358304..358581,359196..359301,359412..359640,360262..360350,360446..360691,360849..360896)
location: region:358304-360896:1
so has part: feature:358304-358581:1:exon
so has part: feature:359196-359301:1:exon
so has part: feature:359412-359640:1:exon
so has part: feature:360262-360350:1:exon
so has part: feature:360446-360691:1:exon
so has part: feature:360849-360896:1:exon

XP_037227805.1
type: Protein
SIO_000068: ncbiprotein

position:358304:1
position: 358304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360896:1
position: 360896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358304-358581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359196-359301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359412-359640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360262-360350:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360446-360691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360849-360896:1:exon

SARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: SARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(361235..365442)
location: region:361235-365442:-1
so has part: feature:361235-365442:-1:exon
subclass of: SO_0000010

119140503
type: Gene
SIO_000068: ncbigene

position:361235:-1
position: 361235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365442:-1
position: 365442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361235-365442:-1:exon

SARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: SARS2
product: seryl-tRNA synthetase 2, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_037371906.1
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: complement(join(361235..361590,361680..361745,361887..361979,362209..362302,362425..362537,362615..362702,362858..362903,363012..363120,363212..363259,363374..363479,363582..363645,363944..363998,364087..364227,364335..364364,364547..364642,365194..365442))
location: region:361235-365442:-1
so has part: feature:365194-365442:-1:exon
so has part: feature:364547-364642:-1:exon
so has part: feature:364335-364364:-1:exon
so has part: feature:364087-364227:-1:exon
so has part: feature:363944-363998:-1:exon
so has part: feature:363582-363645:-1:exon
so has part: feature:363374-363479:-1:exon
so has part: feature:363212-363259:-1:exon
so has part: feature:363012-363120:-1:exon
so has part: feature:362858-362903:-1:exon
so has part: feature:362615-362702:-1:exon
so has part: feature:362425-362537:-1:exon
so has part: feature:362209-362302:-1:exon
so has part: feature:361887-361979:-1:exon
so has part: feature:361680-361745:-1:exon
so has part: feature:361235-361590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365194-365442:-1:exon

position:365194:-1
position: 365194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364547-364642:-1:exon

position:364547:-1
position: 364547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364642:-1
position: 364642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:364335-364364:-1:exon

position:364335:-1
position: 364335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364364:-1
position: 364364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:364087-364227:-1:exon

position:364087:-1
position: 364087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364227:-1
position: 364227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:363944-363998:-1:exon

position:363944:-1
position: 363944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363998:-1
position: 363998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:363582-363645:-1:exon

position:363582:-1
position: 363582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363645:-1
position: 363645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:363374-363479:-1:exon

position:363374:-1
position: 363374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363479:-1
position: 363479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:363212-363259:-1:exon

position:363212:-1
position: 363212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363259:-1
position: 363259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:363012-363120:-1:exon

position:363012:-1
position: 363012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363120:-1
position: 363120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:362858-362903:-1:exon

position:362858:-1
position: 362858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362903:-1
position: 362903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:362615-362702:-1:exon

position:362615:-1
position: 362615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362702:-1
position: 362702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:362425-362537:-1:exon

position:362425:-1
position: 362425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362537:-1
position: 362537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:362209-362302:-1:exon

position:362209:-1
position: 362209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362302:-1
position: 362302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:361887-361979:-1:exon

position:361887:-1
position: 361887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361979:-1
position: 361979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:361680-361745:-1:exon

position:361680:-1
position: 361680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361745:-1
position: 361745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:361235-361590:-1:exon

position:361590:-1
position: 361590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: SARS2
product: seryl-tRNA synthetase 2, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_037371907.1
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: complement(join(361235..361590,361680..361745,361887..361979,362209..362302,362425..362537,362615..362702,362858..362903,363012..363116,363212..363259,363374..363479,363578..363645,363944..363998,364087..364227,364335..364364,364547..364642,365194..365442))
location: region:361235-365442:-1
so has part: feature:365194-365442:-1:exon
so has part: feature:364547-364642:-1:exon
so has part: feature:364335-364364:-1:exon
so has part: feature:364087-364227:-1:exon
so has part: feature:363944-363998:-1:exon
so has part: feature:363578-363645:-1:exon
so has part: feature:363374-363479:-1:exon
so has part: feature:363212-363259:-1:exon
so has part: feature:363012-363116:-1:exon
so has part: feature:362858-362903:-1:exon
so has part: feature:362615-362702:-1:exon
so has part: feature:362425-362537:-1:exon
so has part: feature:362209-362302:-1:exon
so has part: feature:361887-361979:-1:exon
so has part: feature:361680-361745:-1:exon
so has part: feature:361235-361590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365194-365442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364547-364642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364335-364364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:364087-364227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363944-363998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:363578-363645:-1:exon

position:363578:-1
position: 363578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:363374-363479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:363212-363259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:363012-363116:-1:exon

position:363116:-1
position: 363116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:362858-362903:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:362615-362702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:362425-362537:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:362209-362302:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:361887-361979:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:361680-361745:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:361235-361590:-1:exon

SARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: SARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine--tRNA ligase, mitochondrial isoform X1
translation: MAARRAVGAAVRGWRRAASGGAGAGGGVPGGGGAARSRLYEHVREGRSARPQLDVAALSEREVERRRGALRGGDLGGIVRSWARLGEVRASIARLQAEKDQVAQGVRALLAAHDKETAEALPAYTSLRAQGRQIRLELQQLLAEEATLDEQFYIQALQLPNRTHPEAPVGDESQARVVEVVGEKPVFTFKPKGHLELGESLDIIRQRRLSHVSGHRSYYLCGAGALLQHALVRFAMTKLLSKGFLPMTVPDLLRGAVFEGCGMQPNATPSPIYTIDPSRFEDLCLAGTSEVGIAGYFMDHAVRLEDLPLRIVCSSTCYRAETDTGREPWGLYRVHQFTKVEMFGVTAAESGAESEALLAEFVALQKEIFSELGLHYRVLDMPTEELGLPAYRKFDIEAWMPGRGKYGEISSASNCTDYQSRRLNIMYSDSARRLRHAHTVNGTACAVSRMLIALLECNQLPDGSVRVPPALQPLIGQTVLTRPPAPLLRYIGPNQPGGGPEGP
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: complement(join(361462..361590,361680..361745,361887..361979,362209..362302,362425..362537,362615..362702,362858..362903,363012..363120,363212..363259,363374..363479,363582..363645,363944..363998,364087..364227,364335..364364,364547..364642,365194..365427))
location: region:361462-365427:-1
so has part: feature:365194-365427:-1:exon
so has part: feature:364547-364642:-1:exon
so has part: feature:364335-364364:-1:exon
so has part: feature:364087-364227:-1:exon
so has part: feature:363944-363998:-1:exon
so has part: feature:363582-363645:-1:exon
so has part: feature:363374-363479:-1:exon
so has part: feature:363212-363259:-1:exon
so has part: feature:363012-363120:-1:exon
so has part: feature:362858-362903:-1:exon
so has part: feature:362615-362702:-1:exon
so has part: feature:362425-362537:-1:exon
so has part: feature:362209-362302:-1:exon
so has part: feature:361887-361979:-1:exon
so has part: feature:361680-361745:-1:exon
so has part: feature:361462-361590:-1:exon

XP_037227803.1
type: Protein
SIO_000068: ncbiprotein

position:361462:-1
position: 361462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365427:-1
position: 365427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365194-365427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364547-364642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364335-364364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:364087-364227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363944-363998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:363582-363645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363374-363479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:363212-363259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:363012-363120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:362858-362903:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:362615-362702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:362425-362537:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:362209-362302:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:361887-361979:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:361680-361745:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:361462-361590:-1:exon

SARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: SARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine--tRNA ligase, mitochondrial isoform X2
translation: MAARRAVGAAVRGWRRAASGGAGAGGGVPGGGGAARSRLYEHVREGRSARPQLDVAALSEREVERRRGALRGGDLGGIVRSWARLGEVRASIARLQAEKDQVAQGVRALLAAHDKETAEALPAYTSLRAQGRQIRLELQQLLAEEATLDEQFYIQALQLPNRTHPEAPVGDESQARVVEVVGEKPVFTFKPKGHLELGESLDIIRQRWAPVACLGPSLLLPVRGRGAAAARARALRHDQAALQGFPTHDSPRPAARRRFCCGMQPNATPSPIYTIDPSRFEDLCLAGTSEVGIAGYFMDHAVRLEDLPLRIVCSSTCYRAETDTGREPWGLYRVHQFTKVEMFGVTAAESGAESEALLAEFVALQKEIFSELGLHYRVLDMPTEELGLPAYRKFDIEAWMPGRGKYGEISSASNCTDYQSRRLNIMYSDSARRLRHAHTVNGTACAVSRMLIALLECNQLPDGSVRVPPALQPLIGQTVLTRPPAPLLRYIGPNQPGGGPEGP
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: complement(join(361462..361590,361680..361745,361887..361979,362209..362302,362425..362537,362615..362702,362858..362903,363012..363116,363212..363259,363374..363479,363578..363645,363944..363998,364087..364227,364335..364364,364547..364642,365194..365427))
location: region:361462-365427:-1
so has part: feature:365194-365427:-1:exon
so has part: feature:364547-364642:-1:exon
so has part: feature:364335-364364:-1:exon
so has part: feature:364087-364227:-1:exon
so has part: feature:363944-363998:-1:exon
so has part: feature:363578-363645:-1:exon
so has part: feature:363374-363479:-1:exon
so has part: feature:363212-363259:-1:exon
so has part: feature:363012-363116:-1:exon
so has part: feature:362858-362903:-1:exon
so has part: feature:362615-362702:-1:exon
so has part: feature:362425-362537:-1:exon
so has part: feature:362209-362302:-1:exon
so has part: feature:361887-361979:-1:exon
so has part: feature:361680-361745:-1:exon
so has part: feature:361462-361590:-1:exon

XP_037227804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365194-365427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364547-364642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364335-364364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:364087-364227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:363944-363998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:363578-363645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363374-363479:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:363212-363259:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:363012-363116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:362858-362903:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:362615-362702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:362425-362537:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:362209-362302:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:361887-361979:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:361680-361745:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:361462-361590:-1:exon

MRPS12
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: MRPS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(365992..367043)
location: region:365992-367043:-1
so has part: feature:365992-367043:-1:exon
subclass of: SO_0000010

119140485
type: Gene
SIO_000068: ncbigene

position:365992:-1
position: 365992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367043:-1
position: 367043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365992-367043:-1:exon

MRPS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: MRPS12
product: mitochondrial ribosomal protein S12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_037371875.1
SIO_010081: MRPS12
subclass of: SO_0000673
so part of: MRPS12
location: complement(join(365992..366536,366613..366670,366780..367043))
location: region:365992-367043:-1
so has part: feature:366780-367043:-1:exon
so has part: feature:366613-366670:-1:exon
so has part: feature:365992-366536:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366780-367043:-1:exon

position:366780:-1
position: 366780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366613-366670:-1:exon

position:366613:-1
position: 366613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366670:-1
position: 366670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365992-366536:-1:exon

position:366536:-1
position: 366536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: MRPS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S12, mitochondrial
translation: MLRSSRIRALALPAFPRQQATPLGAWPRTALAPPPTYRRRPSKLKEELDQSHSGERQIGVSSAQSAGRREEGAGRALIWRRCEARAMPLRALLKAAASLRGCATGALPPAPMLGKQPVPLYPQQAAAMATLNQMHRQGRPKPPPPKLGATFGRPQIKGVVIKNLIRKPKKPNSANRKCARVRLSNGKEAVAFIPGEGHNLQEHHVVLVQGGRTQDLPGVKLTIIRGKYDCAHVQKKK
SIO_010081: MRPS12
subclass of: SO_0000673
so part of: MRPS12
location: complement(join(366130..366536,366613..366670,366780..367028))
location: region:366130-367028:-1
so has part: feature:366780-367028:-1:exon
so has part: feature:366613-366670:-1:exon
so has part: feature:366130-366536:-1:exon

XP_037227772.1
type: Protein
SIO_000068: ncbiprotein

position:366130:-1
position: 366130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367028:-1
position: 367028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366780-367028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366613-366670:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366130-366536:-1:exon

PAK4
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 366988..390605
location: region:366988-390605:1
so has part: feature:366988-390605:1:exon
subclass of: SO_0000010

119140484
type: Gene
SIO_000068: ncbigene

position:366988:1
position: 366988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390605:1
position: 390605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366988-390605:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_037371865.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(366988..367086,367893..367957,385388..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:366988-390605:1
so has part: feature:366988-367086:1:exon
so has part: feature:367893-367957:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366988-367086:1:exon

position:367086:1
position: 367086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367893-367957:1:exon

position:367893:1
position: 367893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367957:1
position: 367957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385388-385611:1:exon

position:385388:1
position: 385388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385611:1
position: 385611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:387228-387917:1:exon

position:387228:1
position: 387228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387917:1
position: 387917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:388347-388790:1:exon

position:388347:1
position: 388347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388790:1
position: 388790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:388894-389027:1:exon

position:388894:1
position: 388894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389027:1
position: 389027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:389112-389238:1:exon

position:389112:1
position: 389112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389238:1
position: 389238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:389319-389444:1:exon

position:389319:1
position: 389319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389444:1
position: 389444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:389541-389675:1:exon

position:389541:1
position: 389541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389675:1
position: 389675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:389752-390605:1:exon

position:389752:1
position: 389752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037371873.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(367018..367108,367893..367957,385388..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:367018-390605:1
so has part: feature:367018-367108:1:exon
so has part: feature:367893-367957:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

position:367018:1
position: 367018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367018-367108:1:exon

position:367108:1
position: 367108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367893-367957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389752-390605:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_037371863.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(377904..378836,385388..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:377904-390605:1
so has part: feature:377904-378836:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

position:377904:1
position: 377904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377904-378836:1:exon

position:378836:1
position: 378836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389752-390605:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_037371864.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(377904..378836,385388..385611,387228..387911,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:377904-390605:1
so has part: feature:377904-378836:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387911:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377904-378836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387228-387911:1:exon

position:387911:1
position: 387911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389752-390605:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037371874.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(377904..378836,385388..385611,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:377904-390605:1
so has part: feature:377904-378836:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377904-378836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389752-390605:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X1
translation: MLLPHWFPAQISSIPSCFSQASSLTPPSLAAAISSPGYSCLRTLLTDYRPGSVGESSTLPGLENGLVAGLTMFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPLRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHQQQPRGQEPGPKPAPPASGRPPPPEYPKTPAERDGWRDYPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(378644..378836,385388..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:378644-389907:1
so has part: feature:378644-378836:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227760.1
type: Protein
SIO_000068: ncbiprotein

position:378644:1
position: 378644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389907:1
position: 389907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378644-378836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389752-389907:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X2
translation: MLLPHWFPAQISSIPSCFSQASSLTPPSLAAAISSPGYSCLRTLLTDYRPGSVGESSTLPGLENGLVAGLTMFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPLRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHQQQPRGQEPGPKPAPPASGRPPPPEYPKTPAERDGWRDYPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(378644..378836,385388..385611,387228..387911,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:378644-389907:1
so has part: feature:378644-378836:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387911:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378644-378836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387228-387911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389752-389907:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X4
translation: MLLPHWFPAQISSIPSCFSQASSLTPPSLAAAISSPGYSCLRTLLTDYRPGSVGESSTLPGLENGLVAGLTMFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(378644..378836,385388..385611,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:378644-389907:1
so has part: feature:378644-378836:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378644-378836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389752-389907:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037371868.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(379498..379671,381160..383009,383136..384870,385388..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:379498-390605:1
so has part: feature:379498-379671:1:exon
so has part: feature:381160-383009:1:exon
so has part: feature:383136-384870:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

position:379498:1
position: 379498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379498-379671:1:exon

position:379671:1
position: 379671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:381160-383009:1:exon

position:381160:1
position: 381160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383009:1
position: 383009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:383136-384870:1:exon

position:383136:1
position: 383136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384870:1
position: 384870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389752-390605:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037371872.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(379498..379671,381510..383009,383136..384870,385388..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:379498-390605:1
so has part: feature:379498-379671:1:exon
so has part: feature:381510-383009:1:exon
so has part: feature:383136-384870:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379498-379671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381510-383009:1:exon

position:381510:1
position: 381510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:383136-384870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389752-390605:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_037371871.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(379499..379671,385388..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:379499-390605:1
so has part: feature:379499-379671:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

position:379499:1
position: 379499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379499-379671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389752-390605:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_037371866.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(379683..383009,383136..384870,385388..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:379683-390605:1
so has part: feature:379683-383009:1:exon
so has part: feature:383136-384870:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

position:379683:1
position: 379683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379683-383009:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383136-384870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389752-390605:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_037371870.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(379683..383009,383136..384866,385388..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:379683-390605:1
so has part: feature:379683-383009:1:exon
so has part: feature:383136-384866:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379683-383009:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383136-384866:1:exon

position:384866:1
position: 384866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389752-390605:1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: PAK4
product: p21 (RAC1) activated kinase 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_037371869.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(379683..383009,385388..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..390605)
location: region:379683-390605:1
so has part: feature:379683-383009:1:exon
so has part: feature:385388-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-390605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379683-383009:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385388-385611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389752-390605:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X3
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPLRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHQQQPRGQEPGPKPAPPASGRPPPPEYPKTPAERDGWRDYPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(385408..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:385408-389907:1
so has part: feature:385408-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227762.1
type: Protein
SIO_000068: ncbiprotein

position:385408:1
position: 385408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385408-385611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389752-389907:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X3
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPLRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHQQQPRGQEPGPKPAPPASGRPPPPEYPKTPAERDGWRDYPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(385408..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:385408-389907:1
so has part: feature:385408-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385408-385611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389752-389907:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X3
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPLRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHQQQPRGQEPGPKPAPPASGRPPPPEYPKTPAERDGWRDYPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(385408..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:385408-389907:1
so has part: feature:385408-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385408-385611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389752-389907:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X3
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPLRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHQQQPRGQEPGPKPAPPASGRPPPPEYPKTPAERDGWRDYPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(385408..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:385408-389907:1
so has part: feature:385408-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385408-385611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389752-389907:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X3
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPLRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHQQQPRGQEPGPKPAPPASGRPPPPEYPKTPAERDGWRDYPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(385408..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:385408-389907:1
so has part: feature:385408-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385408-385611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389752-389907:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X3
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPLRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHQQQPRGQEPGPKPAPPASGRPPPPEYPKTPAERDGWRDYPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(385408..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:385408-389907:1
so has part: feature:385408-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385408-385611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389752-389907:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X3
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPLRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHQQQPRGQEPGPKPAPPASGRPPPPEYPKTPAERDGWRDYPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(385408..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:385408-389907:1
so has part: feature:385408-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385408-385611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389752-389907:1:exon

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: PAK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 4 isoform X3
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGSKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPLRRDQLYQENGLSEGPAAARPHEDAGRSKEKSRHGARSELEQGKEKPREREEQRAHHHHHQQQPRGQEPGPKPAPPASGRPPPPEYPKTPAERDGWRDYPADRDYSEPADRVVRRERPEPSDKRPKSTYTAETSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPGRGAGSQVKAEHRPGRPQEVASNGPVSGSASSSRAHPTGPPRSKNPEPPHPGLTPHASDPHLSRQPPPGPPPAPVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSTGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: join(385408..385611,387228..387917,388347..388790,388894..389027,389112..389238,389319..389444,389541..389675,389752..389907)
location: region:385408-389907:1
so has part: feature:385408-385611:1:exon
so has part: feature:387228-387917:1:exon
so has part: feature:388347-388790:1:exon
so has part: feature:388894-389027:1:exon
so has part: feature:389112-389238:1:exon
so has part: feature:389319-389444:1:exon
so has part: feature:389541-389675:1:exon
so has part: feature:389752-389907:1:exon

XP_037227770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385408-385611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:387228-387917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388347-388790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:388894-389027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389112-389238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389319-389444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389541-389675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389752-389907:1:exon

SYCN
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: SYCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(391392..395026)
location: region:391392-395026:-1
so has part: feature:391392-395026:-1:exon
subclass of: SO_0000010

119140525
type: Gene
SIO_000068: ncbigene

position:391392:-1
position: 391392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395026:-1
position: 395026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391392-395026:-1:exon

SYCN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: SYCN
product: syncollin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371947.1
SIO_010081: SYCN
subclass of: SO_0000673
so part of: SYCN
location: complement(join(391392..392289,394970..395026))
location: region:391392-395026:-1
so has part: feature:394970-395026:-1:exon
so has part: feature:391392-392289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394970-395026:-1:exon

position:394970:-1
position: 394970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391392-392289:-1:exon

position:392289:-1
position: 392289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYCN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: SYCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syncollin
translation: MGAPPGPPRAPVCSPSPPSAAPGAAAGGLAMAALVVAALVAAVLAGAEAQCPSPSDLRTANGTRICAQLYADNSPYYDQCCAGPVLVVEPGADVPYMPRGWAGRVSSLVVGTRCELTVWSRAGKKGKMRRFGAGAVPRLQEVRRGLFGDWDNAIRGYYCSCK
SIO_010081: SYCN
subclass of: SO_0000673
so part of: SYCN
location: complement(join(391858..392289,394970..395026))
location: region:391858-395026:-1
so has part: feature:394970-395026:-1:exon
so has part: feature:391858-392289:-1:exon

XP_037227844.1
type: Protein
SIO_000068: ncbiprotein

position:391858:-1
position: 391858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394970-395026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391858-392289:-1:exon

LRFN1
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LRFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(395830..401482)
location: region:395830-401482:-1
so has part: feature:395830-401482:-1:exon
subclass of: SO_0000010

119140517
type: Gene
SIO_000068: ncbigene

position:395830:-1
position: 395830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401482:-1
position: 401482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395830-401482:-1:exon

LRFN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LRFN1
product: leucine rich repeat and fibronectin type III domain containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_037371938.1
SIO_010081: LRFN1
subclass of: SO_0000673
so part of: LRFN1
location: complement(join(395830..396396,397758..399106,399984..400031,401367..401482))
location: region:395830-401482:-1
so has part: feature:401367-401482:-1:exon
so has part: feature:399984-400031:-1:exon
so has part: feature:397758-399106:-1:exon
so has part: feature:395830-396396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401367-401482:-1:exon

position:401367:-1
position: 401367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399984-400031:-1:exon

position:399984:-1
position: 399984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400031:-1
position: 400031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:397758-399106:-1:exon

position:397758:-1
position: 397758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399106:-1
position: 399106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:395830-396396:-1:exon

position:396396:-1
position: 396396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRFN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LRFN1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type III domain-containing protein 1
translation: MAKLLVPLVMLGAVAGSHRCPPRCLCPAAAPNPTLLCARTGLLAVPPSLDRGAVELRLADNFIGAVGRADFANMSSLVHLTLSRNGLRRLAPGAFADLRALRALHLDGNRLPALSGAQLRGLASLRHLILANNQLAAIEPAAFAAFAATVEDLDLSHNNLPALPWEAVAGMASLATLTLDHNLLERVPAGAVARLPRLARLDLTANRLRALPPVPGPPGPSLAAGGNPLHCNCELLWLRRLAQPGRLESCASPPPLAGRLLWAVPEEELACRAPAIAGAAADPAAVLEGQPLRLGCAAAGDPPPALHWLGPDGRLVQNGSRRAVGPDGSLELRVATLGDHGAFTCVASNAAGEAAARVQVAVFPLPVAREDGDGDGETAAGPSDMARAGGNETWVPGERRVVAAELTATSARIRWLPQRHVPGIRMFQVTYNSSLDDSLVYRLLPPSSRSFVLRDLAAGRHYQLCVTALHAEGVPAAPTARGLGCVRFATPGGAPGCAALPRPHFLGGTVIIVIGAAIAASVLVFILILTARYKAAAARRPPAAVASVCSQTNGAHRSPEPAPPPLPAPAPMGATGGGARGLFPSHSYPRRARTRRHGSLPRLDLPEGTPPLRPSFGSTHWMLESTV
SIO_010081: LRFN1
subclass of: SO_0000673
so part of: LRFN1
location: complement(join(395838..396396,397758..399084))
location: region:395838-399084:-1
so has part: feature:397758-399084:-1:exon
so has part: feature:395838-396396:-1:exon

XP_037227835.1
type: Protein
SIO_000068: ncbiprotein

position:395838:-1
position: 395838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399084:-1
position: 399084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397758-399084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395838-396396:-1:exon

LOC119140514
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(406656..418682)
location: region:406656-418682:-1
so has part: feature:406656-418682:-1:exon
subclass of: SO_0000010

119140514
type: Gene
SIO_000068: ncbigene

position:406656:-1
position: 406656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418682:-1
position: 418682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406656-418682:-1:exon

LOC119140514
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140514
product: EH domain-containing protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_037371933.1
SIO_010081: LOC119140514
subclass of: SO_0000673
so part of: LOC119140514
location: complement(join(406656..407748,409649..409813,412119..412531,414707..414804,418277..418682))
location: region:406656-418682:-1
so has part: feature:418277-418682:-1:exon
so has part: feature:414707-414804:-1:exon
so has part: feature:412119-412531:-1:exon
so has part: feature:409649-409813:-1:exon
so has part: feature:406656-407748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418277-418682:-1:exon

position:418277:-1
position: 418277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414707-414804:-1:exon

position:414707:-1
position: 414707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414804:-1
position: 414804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412119-412531:-1:exon

position:412119:-1
position: 412119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412531:-1
position: 412531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:409649-409813:-1:exon

position:409649:-1
position: 409649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409813:-1
position: 409813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406656-407748:-1:exon

position:407748:-1
position: 407748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119140514
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EH domain-containing protein 2-like
translation: MFSWLRRQPPPAPPEVRSLRQGLRTLYLRKLLPLERHYRFHQFHSPALDEADFDTKPMVLVAGQYSTGKTTFLQYLLEQEIPGSRIGPEPTTDSFVAIMHGETPGITPGNALVVDPKKPFRKLSPFGSTFLNRFMCAHLPNQVLESITLIDTPGILSGAKQRVCRGYDFPAVLQWFAERVDLIILLFDAHKLEISDEFSEAIRALKGNEDKIRVVLNKADMVETQQLMRVYGALMWSLGKVFNTPEVLRVFIGSFWSQPLLIADNRRLFDLEEQDLFQEIQNLPRNAALRKLNDLVKRARLLRVHAHIVARLRREMPALFGRGSTKKRLIAQLPRLFARIQLEQRIPPGDFPDCARMQELLLSQDFARFPAPRPELLAGLERALSCDLAALLEPEPEPDPAGGGGGVRGGAFDGARVGPFGEEEGEEGEEEEGEEGEEGEWAVMKDKAKYDEIFYGLAPLGGKLSGRRARGWMVRSNLPSSVLGRIWQLSDVDRDGMLDAEEFALAGHLIGAKLEGRGLPAHLPPRLVPPSKRRPKGSAE
SIO_010081: LOC119140514
subclass of: SO_0000673
so part of: LOC119140514
location: complement(join(407200..407748,409649..409813,412119..412531,414707..414804,418277..418674))
location: region:407200-418674:-1
so has part: feature:418277-418674:-1:exon
so has part: feature:414707-414804:-1:exon
so has part: feature:412119-412531:-1:exon
so has part: feature:409649-409813:-1:exon
so has part: feature:407200-407748:-1:exon

XP_037227830.1
type: Protein
SIO_000068: ncbiprotein

position:407200:-1
position: 407200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418674:-1
position: 418674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418277-418674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414707-414804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412119-412531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409649-409813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:407200-407748:-1:exon

BICRA
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: BICRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(424523..456640)
location: region:424523-456640:-1
so has part: feature:424523-456640:-1:exon
subclass of: SO_0000010

119140500
type: Gene
SIO_000068: ncbigene

position:424523:-1
position: 424523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456640:-1
position: 456640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424523-456640:-1:exon

BICRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: BICRA
product: BRD4 interacting chromatin remodeling complex associated protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_037371901.1
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: complement(join(424523..425831,426148..426250,426369..426463,428363..428511,428649..428707,428993..429118,429546..429673,431518..431701,435477..437411,438803..438868,439252..439294,440052..440097,447617..447692,456483..456608))
location: region:424523-456608:-1
so has part: feature:456483-456608:-1:exon
so has part: feature:447617-447692:-1:exon
so has part: feature:440052-440097:-1:exon
so has part: feature:439252-439294:-1:exon
so has part: feature:438803-438868:-1:exon
so has part: feature:435477-437411:-1:exon
so has part: feature:431518-431701:-1:exon
so has part: feature:429546-429673:-1:exon
so has part: feature:428993-429118:-1:exon
so has part: feature:428649-428707:-1:exon
so has part: feature:428363-428511:-1:exon
so has part: feature:426369-426463:-1:exon
so has part: feature:426148-426250:-1:exon
so has part: feature:424523-425831:-1:exon

position:456608:-1
position: 456608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456483-456608:-1:exon

position:456483:-1
position: 456483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447617-447692:-1:exon

position:447617:-1
position: 447617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447692:-1
position: 447692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:440052-440097:-1:exon

position:440052:-1
position: 440052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440097:-1
position: 440097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:439252-439294:-1:exon

position:439252:-1
position: 439252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439294:-1
position: 439294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:438803-438868:-1:exon

position:438803:-1
position: 438803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438868:-1
position: 438868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:435477-437411:-1:exon

position:435477:-1
position: 435477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437411:-1
position: 437411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:431518-431701:-1:exon

position:431518:-1
position: 431518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431701:-1
position: 431701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:429546-429673:-1:exon

position:429546:-1
position: 429546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429673:-1
position: 429673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:428993-429118:-1:exon

position:428993:-1
position: 428993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429118:-1
position: 429118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:428649-428707:-1:exon

position:428649:-1
position: 428649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428707:-1
position: 428707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:428363-428511:-1:exon

position:428363:-1
position: 428363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428511:-1
position: 428511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:426369-426463:-1:exon

position:426369:-1
position: 426369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426463:-1
position: 426463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:426148-426250:-1:exon

position:426148:-1
position: 426148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426250:-1
position: 426250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:424523-425831:-1:exon

position:425831:-1
position: 425831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BICRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: BICRA
product: BRD4 interacting chromatin remodeling complex associated protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_037371902.1
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: complement(join(424524..425831,426148..426250,426369..426463,428363..428511,428649..428707,428993..429118,429546..429673,431518..431701,435477..437411,438803..438868,439252..439294,440052..440097,456483..456640))
location: region:424524-456640:-1
so has part: feature:456483-456640:-1:exon
so has part: feature:440052-440097:-1:exon
so has part: feature:439252-439294:-1:exon
so has part: feature:438803-438868:-1:exon
so has part: feature:435477-437411:-1:exon
so has part: feature:431518-431701:-1:exon
so has part: feature:429546-429673:-1:exon
so has part: feature:428993-429118:-1:exon
so has part: feature:428649-428707:-1:exon
so has part: feature:428363-428511:-1:exon
so has part: feature:426369-426463:-1:exon
so has part: feature:426148-426250:-1:exon
so has part: feature:424524-425831:-1:exon

position:424524:-1
position: 424524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456483-456640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440052-440097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439252-439294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438803-438868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435477-437411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431518-431701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429546-429673:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428993-429118:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428649-428707:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428363-428511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426369-426463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426148-426250:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:424524-425831:-1:exon

BICRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: BICRA
product: BRD4 interacting chromatin remodeling complex associated protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_037371903.1
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: complement(join(424524..425831,426148..426250,426369..426463,428363..428511,428649..428707,428993..429118,429546..429673,431518..431701,435477..437411,439252..439294,440052..440097,447617..447692,456483..456608))
location: region:424524-456608:-1
so has part: feature:456483-456608:-1:exon
so has part: feature:447617-447692:-1:exon
so has part: feature:440052-440097:-1:exon
so has part: feature:439252-439294:-1:exon
so has part: feature:435477-437411:-1:exon
so has part: feature:431518-431701:-1:exon
so has part: feature:429546-429673:-1:exon
so has part: feature:428993-429118:-1:exon
so has part: feature:428649-428707:-1:exon
so has part: feature:428363-428511:-1:exon
so has part: feature:426369-426463:-1:exon
so has part: feature:426148-426250:-1:exon
so has part: feature:424524-425831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:456483-456608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447617-447692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440052-440097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439252-439294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435477-437411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431518-431701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429546-429673:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428993-429118:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428649-428707:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428363-428511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426369-426463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426148-426250:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:424524-425831:-1:exon

BICRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: BICRA
product: BRD4 interacting chromatin remodeling complex associated protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_037371904.1
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: complement(join(424525..425831,426148..426250,426369..426463,428363..428511,428649..428707,428993..429118,429546..429673,431518..431701,435477..437411,439252..439294,440052..440097,456483..456640))
location: region:424525-456640:-1
so has part: feature:456483-456640:-1:exon
so has part: feature:440052-440097:-1:exon
so has part: feature:439252-439294:-1:exon
so has part: feature:435477-437411:-1:exon
so has part: feature:431518-431701:-1:exon
so has part: feature:429546-429673:-1:exon
so has part: feature:428993-429118:-1:exon
so has part: feature:428649-428707:-1:exon
so has part: feature:428363-428511:-1:exon
so has part: feature:426369-426463:-1:exon
so has part: feature:426148-426250:-1:exon
so has part: feature:424525-425831:-1:exon

position:424525:-1
position: 424525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456483-456640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440052-440097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439252-439294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435477-437411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431518-431701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429546-429673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428993-429118:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428649-428707:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428363-428511:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426369-426463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426148-426250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:424525-425831:-1:exon

BICRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: BICRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRD4-interacting chromatin-remodeling complex-associated protein isoform X4
translation: MCRCLAGSCLRSPCGDVWETPRRLLLKHHVDMDDEDGRCLLDVICDPQALNDFLHGSEKLHVQEASGNHLSAEPSQPPTSVDLDFLEDDILGSPAGGGANLQNSEQPCDILQQSLQEANITEQTLEAEAELDLGSFQLPTLQPVVQAASDGTPQIFPGGADLIGLQPPAVLTHQALVQQSVGADVVNKAISVQPFLQQVGLGNVTIQPISNLQGLPNGSPSGTLGIGPIQVVGQQVMAINQPAQQIIAKQVQPSQVATMPVGSYITQTAPEQQQVTLASAGVSPQSAGLVIQKNLPAVATTTLNGNSMFGGVAGTQGSQPLTVTSNLSSPLVQAQNVIIHRTPTPIQPKPAGVLQQKLYQITPKPFASNNATLTIQNEAALQQQKAQQNLTFMAGKAGQNVVLSGFPQGLPANVFKQPPPQQQALSKPMSVHLLNQGSSIVIPAQHVPQAMLQGQNQFLLPGQLAGASAVQIPQQLSALQANMGGQILTTSHPGGQAHIITSQGPGGQLITNQILTNQNIAGQLNLGQVLTSQNAHGTAHILSAPIQLQPGQVGQPALFQMPVSLAGSLTTQSQPSVAASLGQTGQTVIQGVTLPNQVAMLNAPENLGQAVSIQASAATSSQSPGLGQPQPLPSADQSSILTVQTASQPPAPLQLNVPPPPPPQQPVTSQASPGLASSPEKIILGQAAAGAVINQDSMQMFLQQVPQGIILQTKQQPPSSQAPPALAQFTGPSSSVLVGSQGQTVTVTTATAASHAPTALPPSTTGITAPVPAESKTFSSVSAPISTGKGAAAPGKSGATLPIQQPLQTKPGVISSVSGLNLGKGPVPIPVVGKGLPQLVPSVPVPGQPLYDGKLGLKKTPTLQPSKEACFLEQLHKHQGAVLHPDYKTSFRSFDDALRRLLPYHVYQGMLPSARDYQKVDEEFEAVSTQLLRRTQAMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKTTLALDKQLAKEKPDEYVSSSRSHNLSSSSSSSSSSSSAPSASISSAVAAAAAAAAPPPENLKPPAAQPAPPLPPTKLVIKQSGGSPSVSWAKASPALDGDEDALPSRSKPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPVCRVIKGPDAPAPAAAAAPGGQMNGTVDHVASVAVEKKPAATYCRLPLRKTYRQHLDADKPADAPRPPVAPKQEEGGARGGSASHPSREKAAKGQQDEGAKVFYNRTAAAAAAAAAAPPKADDSTSGLMKELAEAEDEFYRGMIKPDPPDQGAGPEISWEVPLPPAKRRKLEAFEVDNASFSSDSPQDDSLTEHLQSAIDSILNLQQPPSGGGQNVRTPSSSYNSSSSPFSSPAHRTDAYLAPSHNGGLGARTLNR
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: complement(join(424651..425831,426148..426250,426369..426463,428363..428511,428649..428707,428993..429118,429546..429673,431518..431701,435477..437411,439252..439294,440052..440097,456483..456570))
location: region:424651-456570:-1
so has part: feature:456483-456570:-1:exon
so has part: feature:440052-440097:-1:exon
so has part: feature:439252-439294:-1:exon
so has part: feature:435477-437411:-1:exon
so has part: feature:431518-431701:-1:exon
so has part: feature:429546-429673:-1:exon
so has part: feature:428993-429118:-1:exon
so has part: feature:428649-428707:-1:exon
so has part: feature:428363-428511:-1:exon
so has part: feature:426369-426463:-1:exon
so has part: feature:426148-426250:-1:exon
so has part: feature:424651-425831:-1:exon

XP_037227801.1
type: Protein
SIO_000068: ncbiprotein

position:424651:-1
position: 424651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456570:-1
position: 456570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456483-456570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440052-440097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439252-439294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435477-437411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431518-431701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429546-429673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428993-429118:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428649-428707:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428363-428511:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426369-426463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426148-426250:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:424651-425831:-1:exon

BICRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: BICRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRD4-interacting chromatin-remodeling complex-associated protein isoform X2
translation: MCRCLAGSCLRSPCGDVWETPRRLLLKHHVDMDDEDGRCLLDVICDPQALNDFLHGSEKIDSDDLLDNTGDAASAFFEGAGLHVQEASGNHLSAEPSQPPTSVDLDFLEDDILGSPAGGGANLQNSEQPCDILQQSLQEANITEQTLEAEAELDLGSFQLPTLQPVVQAASDGTPQIFPGGADLIGLQPPAVLTHQALVQQSVGADVVNKAISVQPFLQQVGLGNVTIQPISNLQGLPNGSPSGTLGIGPIQVVGQQVMAINQPAQQIIAKQVQPSQVATMPVGSYITQTAPEQQQVTLASAGVSPQSAGLVIQKNLPAVATTTLNGNSMFGGVAGTQGSQPLTVTSNLSSPLVQAQNVIIHRTPTPIQPKPAGVLQQKLYQITPKPFASNNATLTIQNEAALQQQKAQQNLTFMAGKAGQNVVLSGFPQGLPANVFKQPPPQQQALSKPMSVHLLNQGSSIVIPAQHVPQAMLQGQNQFLLPGQLAGASAVQIPQQLSALQANMGGQILTTSHPGGQAHIITSQGPGGQLITNQILTNQNIAGQLNLGQVLTSQNAHGTAHILSAPIQLQPGQVGQPALFQMPVSLAGSLTTQSQPSVAASLGQTGQTVIQGVTLPNQVAMLNAPENLGQAVSIQASAATSSQSPGLGQPQPLPSADQSSILTVQTASQPPAPLQLNVPPPPPPQQPVTSQASPGLASSPEKIILGQAAAGAVINQDSMQMFLQQVPQGIILQTKQQPPSSQAPPALAQFTGPSSSVLVGSQGQTVTVTTATAASHAPTALPPSTTGITAPVPAESKTFSSVSAPISTGKGAAAPGKSGATLPIQQPLQTKPGVISSVSGLNLGKGPVPIPVVGKGLPQLVPSVPVPGQPLYDGKLGLKKTPTLQPSKEACFLEQLHKHQGAVLHPDYKTSFRSFDDALRRLLPYHVYQGMLPSARDYQKVDEEFEAVSTQLLRRTQAMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKTTLALDKQLAKEKPDEYVSSSRSHNLSSSSSSSSSSSSAPSASISSAVAAAAAAAAPPPENLKPPAAQPAPPLPPTKLVIKQSGGSPSVSWAKASPALDGDEDALPSRSKPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPVCRVIKGPDAPAPAAAAAPGGQMNGTVDHVASVAVEKKPAATYCRLPLRKTYRQHLDADKPADAPRPPVAPKQEEGGARGGSASHPSREKAAKGQQDEGAKVFYNRTAAAAAAAAAAPPKADDSTSGLMKELAEAEDEFYRGMIKPDPPDQGAGPEISWEVPLPPAKRRKLEAFEVDNASFSSDSPQDDSLTEHLQSAIDSILNLQQPPSGGGQNVRTPSSSYNSSSSPFSSPAHRTDAYLAPSHNGGLGARTLNR
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: complement(join(424651..425831,426148..426250,426369..426463,428363..428511,428649..428707,428993..429118,429546..429673,431518..431701,435477..437411,438803..438868,439252..439294,440052..440097,456483..456570))
location: region:424651-456570:-1
so has part: feature:456483-456570:-1:exon
so has part: feature:440052-440097:-1:exon
so has part: feature:439252-439294:-1:exon
so has part: feature:438803-438868:-1:exon
so has part: feature:435477-437411:-1:exon
so has part: feature:431518-431701:-1:exon
so has part: feature:429546-429673:-1:exon
so has part: feature:428993-429118:-1:exon
so has part: feature:428649-428707:-1:exon
so has part: feature:428363-428511:-1:exon
so has part: feature:426369-426463:-1:exon
so has part: feature:426148-426250:-1:exon
so has part: feature:424651-425831:-1:exon

XP_037227799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456483-456570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440052-440097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439252-439294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438803-438868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435477-437411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431518-431701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429546-429673:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428993-429118:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428649-428707:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428363-428511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426369-426463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426148-426250:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:424651-425831:-1:exon

BICRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: BICRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRD4-interacting chromatin-remodeling complex-associated protein isoform X3
translation: MSGRPRADCCSNITYDCIKQICSVSPLLPIVGTELLKARVDMDDEDGRCLLDVICDPQALNDFLHGSEKLHVQEASGNHLSAEPSQPPTSVDLDFLEDDILGSPAGGGANLQNSEQPCDILQQSLQEANITEQTLEAEAELDLGSFQLPTLQPVVQAASDGTPQIFPGGADLIGLQPPAVLTHQALVQQSVGADVVNKAISVQPFLQQVGLGNVTIQPISNLQGLPNGSPSGTLGIGPIQVVGQQVMAINQPAQQIIAKQVQPSQVATMPVGSYITQTAPEQQQVTLASAGVSPQSAGLVIQKNLPAVATTTLNGNSMFGGVAGTQGSQPLTVTSNLSSPLVQAQNVIIHRTPTPIQPKPAGVLQQKLYQITPKPFASNNATLTIQNEAALQQQKAQQNLTFMAGKAGQNVVLSGFPQGLPANVFKQPPPQQQALSKPMSVHLLNQGSSIVIPAQHVPQAMLQGQNQFLLPGQLAGASAVQIPQQLSALQANMGGQILTTSHPGGQAHIITSQGPGGQLITNQILTNQNIAGQLNLGQVLTSQNAHGTAHILSAPIQLQPGQVGQPALFQMPVSLAGSLTTQSQPSVAASLGQTGQTVIQGVTLPNQVAMLNAPENLGQAVSIQASAATSSQSPGLGQPQPLPSADQSSILTVQTASQPPAPLQLNVPPPPPPQQPVTSQASPGLASSPEKIILGQAAAGAVINQDSMQMFLQQVPQGIILQTKQQPPSSQAPPALAQFTGPSSSVLVGSQGQTVTVTTATAASHAPTALPPSTTGITAPVPAESKTFSSVSAPISTGKGAAAPGKSGATLPIQQPLQTKPGVISSVSGLNLGKGPVPIPVVGKGLPQLVPSVPVPGQPLYDGKLGLKKTPTLQPSKEACFLEQLHKHQGAVLHPDYKTSFRSFDDALRRLLPYHVYQGMLPSARDYQKVDEEFEAVSTQLLRRTQAMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKTTLALDKQLAKEKPDEYVSSSRSHNLSSSSSSSSSSSSAPSASISSAVAAAAAAAAPPPENLKPPAAQPAPPLPPTKLVIKQSGGSPSVSWAKASPALDGDEDALPSRSKPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPVCRVIKGPDAPAPAAAAAPGGQMNGTVDHVASVAVEKKPAATYCRLPLRKTYRQHLDADKPADAPRPPVAPKQEEGGARGGSASHPSREKAAKGQQDEGAKVFYNRTAAAAAAAAAAPPKADDSTSGLMKELAEAEDEFYRGMIKPDPPDQGAGPEISWEVPLPPAKRRKLEAFEVDNASFSSDSPQDDSLTEHLQSAIDSILNLQQPPSGGGQNVRTPSSSYNSSSSPFSSPAHRTDAYLAPSHNGGLGARTLNR
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: complement(join(424651..425831,426148..426250,426369..426463,428363..428511,428649..428707,428993..429118,429546..429673,431518..431701,435477..437411,439252..439294,440052..440097,447617..447692,456483..456524))
location: region:424651-456524:-1
so has part: feature:456483-456524:-1:exon
so has part: feature:447617-447692:-1:exon
so has part: feature:440052-440097:-1:exon
so has part: feature:439252-439294:-1:exon
so has part: feature:435477-437411:-1:exon
so has part: feature:431518-431701:-1:exon
so has part: feature:429546-429673:-1:exon
so has part: feature:428993-429118:-1:exon
so has part: feature:428649-428707:-1:exon
so has part: feature:428363-428511:-1:exon
so has part: feature:426369-426463:-1:exon
so has part: feature:426148-426250:-1:exon
so has part: feature:424651-425831:-1:exon

XP_037227800.1
type: Protein
SIO_000068: ncbiprotein

position:456524:-1
position: 456524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456483-456524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447617-447692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440052-440097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439252-439294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435477-437411:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431518-431701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429546-429673:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:428993-429118:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428649-428707:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428363-428511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:426369-426463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426148-426250:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:424651-425831:-1:exon

BICRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: BICRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
translation: MSGRPRADCCSNITYDCIKQICSVSPLLPIVGTELLKARVDMDDEDGRCLLDVICDPQALNDFLHGSEKIDSDDLLDNTGDAASAFFEGAGLHVQEASGNHLSAEPSQPPTSVDLDFLEDDILGSPAGGGANLQNSEQPCDILQQSLQEANITEQTLEAEAELDLGSFQLPTLQPVVQAASDGTPQIFPGGADLIGLQPPAVLTHQALVQQSVGADVVNKAISVQPFLQQVGLGNVTIQPISNLQGLPNGSPSGTLGIGPIQVVGQQVMAINQPAQQIIAKQVQPSQVATMPVGSYITQTAPEQQQVTLASAGVSPQSAGLVIQKNLPAVATTTLNGNSMFGGVAGTQGSQPLTVTSNLSSPLVQAQNVIIHRTPTPIQPKPAGVLQQKLYQITPKPFASNNATLTIQNEAALQQQKAQQNLTFMAGKAGQNVVLSGFPQGLPANVFKQPPPQQQALSKPMSVHLLNQGSSIVIPAQHVPQAMLQGQNQFLLPGQLAGASAVQIPQQLSALQANMGGQILTTSHPGGQAHIITSQGPGGQLITNQILTNQNIAGQLNLGQVLTSQNAHGTAHILSAPIQLQPGQVGQPALFQMPVSLAGSLTTQSQPSVAASLGQTGQTVIQGVTLPNQVAMLNAPENLGQAVSIQASAATSSQSPGLGQPQPLPSADQSSILTVQTASQPPAPLQLNVPPPPPPQQPVTSQASPGLASSPEKIILGQAAAGAVINQDSMQMFLQQVPQGIILQTKQQPPSSQAPPALAQFTGPSSSVLVGSQGQTVTVTTATAASHAPTALPPSTTGITAPVPAESKTFSSVSAPISTGKGAAAPGKSGATLPIQQPLQTKPGVISSVSGLNLGKGPVPIPVVGKGLPQLVPSVPVPGQPLYDGKLGLKKTPTLQPSKEACFLEQLHKHQGAVLHPDYKTSFRSFDDALRRLLPYHVYQGMLPSARDYQKVDEEFEAVSTQLLRRTQAMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKTTLALDKQLAKEKPDEYVSSSRSHNLSSSSSSSSSSSSAPSASISSAVAAAAAAAAPPPENLKPPAAQPAPPLPPTKLVIKQSGGSPSVSWAKASPALDGDEDALPSRSKPPIKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPPPVCRVIKGPDAPAPAAAAAPGGQMNGTVDHVASVAVEKKPAATYCRLPLRKTYRQHLDADKPADAPRPPVAPKQEEGGARGGSASHPSREKAAKGQQDEGAKVFYNRTAAAAAAAAAAPPKADDSTSGLMKELAEAEDEFYRGMIKPDPPDQGAGPEISWEVPLPPAKRRKLEAFEVDNASFSSDSPQDDSLTEHLQSAIDSILNLQQPPSGGGQNVRTPSSSYNSSSSPFSSPAHRTDAYLAPSHNGGLGARTLNR
SIO_010081: BICRA
subclass of: SO_0000673
so part of: BICRA
location: complement(join(424651..425831,426148..426250,426369..426463,428363..428511,428649..428707,428993..429118,429546..429673,431518..431701,435477..437411,438803..438868,439252..439294,440052..440097,447617..447692,456483..456524))
location: region:424651-456524:-1
so has part: feature:456483-456524:-1:exon
so has part: feature:447617-447692:-1:exon
so has part: feature:440052-440097:-1:exon
so has part: feature:439252-439294:-1:exon
so has part: feature:438803-438868:-1:exon
so has part: feature:435477-437411:-1:exon
so has part: feature:431518-431701:-1:exon
so has part: feature:429546-429673:-1:exon
so has part: feature:428993-429118:-1:exon
so has part: feature:428649-428707:-1:exon
so has part: feature:428363-428511:-1:exon
so has part: feature:426369-426463:-1:exon
so has part: feature:426148-426250:-1:exon
so has part: feature:424651-425831:-1:exon

XP_037227798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456483-456524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447617-447692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440052-440097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439252-439294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:438803-438868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:435477-437411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431518-431701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:429546-429673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428993-429118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428649-428707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:428363-428511:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426369-426463:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:426148-426250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:424651-425831:-1:exon

LOC119140494
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(458091..462213)
location: region:458091-462213:-1
so has part: feature:458091-462213:-1:exon
subclass of: SO_0000011

119140494
type: Gene
SIO_000068: ncbigene

position:458091:-1
position: 458091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462213:-1
position: 462213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458091-462213:-1:exon

LOC119140494
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 120794
nc RNA class: lncRNA
gene: LOC119140494
product: uncharacterized LOC119140494
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005101630.1
SIO_010081: LOC119140494
subclass of: SO_0000673
so part of: LOC119140494
location: complement(join(458091..458399,459047..459221,460077..460180,461757..461801,462165..462213))
location: region:458091-462213:-1
so has part: feature:462165-462213:-1:exon
so has part: feature:461757-461801:-1:exon
so has part: feature:460077-460180:-1:exon
so has part: feature:459047-459221:-1:exon
so has part: feature:458091-458399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462165-462213:-1:exon

position:462165:-1
position: 462165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:461757-461801:-1:exon

position:461757:-1
position: 461757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461801:-1
position: 461801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460077-460180:-1:exon

position:460077:-1
position: 460077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460180:-1
position: 460180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459047-459221:-1:exon

position:459047:-1
position: 459047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459221:-1
position: 459221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:458091-458399:-1:exon

position:458399:-1
position: 458399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF541
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: ZNF541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 465297..478039
location: region:465297-478039:1
so has part: feature:465297-478039:1:exon
subclass of: SO_0000010

119140526
type: Gene
SIO_000068: ncbigene

position:465297:1
position: 465297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478039:1
position: 478039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465297-478039:1:exon

ZNF541
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: ZNF541
product: zinc finger protein 541
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_037371948.1
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: join(465297..465631,466734..466965,467568..468888,469398..469456,470858..471017,471563..471724,472413..472734,473403..473466,473931..474073,474260..474363,474922..474997,475362..475450,476719..476897,477264..478039)
location: region:465297-478039:1
so has part: feature:465297-465631:1:exon
so has part: feature:466734-466965:1:exon
so has part: feature:467568-468888:1:exon
so has part: feature:469398-469456:1:exon
so has part: feature:470858-471017:1:exon
so has part: feature:471563-471724:1:exon
so has part: feature:472413-472734:1:exon
so has part: feature:473403-473466:1:exon
so has part: feature:473931-474073:1:exon
so has part: feature:474260-474363:1:exon
so has part: feature:474922-474997:1:exon
so has part: feature:475362-475450:1:exon
so has part: feature:476719-476897:1:exon
so has part: feature:477264-478039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465297-465631:1:exon

position:465631:1
position: 465631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466734-466965:1:exon

position:466734:1
position: 466734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466965:1
position: 466965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:467568-468888:1:exon

position:467568:1
position: 467568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468888:1
position: 468888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:469398-469456:1:exon

position:469398:1
position: 469398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469456:1
position: 469456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:470858-471017:1:exon

position:470858:1
position: 470858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471017:1
position: 471017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:471563-471724:1:exon

position:471563:1
position: 471563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471724:1
position: 471724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:472413-472734:1:exon

position:472413:1
position: 472413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472734:1
position: 472734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:473403-473466:1:exon

position:473403:1
position: 473403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473466:1
position: 473466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:473931-474073:1:exon

position:473931:1
position: 473931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474073:1
position: 474073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:474260-474363:1:exon

position:474260:1
position: 474260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474363:1
position: 474363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:474922-474997:1:exon

position:474922:1
position: 474922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474997:1
position: 474997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:475362-475450:1:exon

position:475362:1
position: 475362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475450:1
position: 475450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:476719-476897:1:exon

position:476719:1
position: 476719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476897:1
position: 476897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:477264-478039:1:exon

position:477264:1
position: 477264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF541
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: ZNF541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 541
translation: MDQYPFDDENGIHLEMHLPGFPESQELLCSEALDCNLCPTAKGVSYAGLSSLDADAAGDALEAELNVFSLYLAKDCGSGQLQGSDWQPWQQEPELPALAGPEEAGGGGSGSAGSGEPPLGSQSSPLGCSRCGKVFGSASALSKHCLSHSQERLHVCAVCSKAFKRPDHLSGHMLTHQKKTPFICPEPDCEKSYCNPRSLRRHYGLRHSCREAPAGEEPSLLPAPGSQGGGKSAEGRLPCSESGPFPPESDLLRDVVSQNCPVGAFPSAEHADAASPGPSRASRLASDGSGLAEDDFSRDCSSCQRDAASSSVTNPAEVPVVAPWENMAIDLTTVSFISEPAGLQPCPDSTLPCFPAPRKPENRSSDNFECMRNVPVCAKSERNSVCLACEPPAAADEHPDASPVPAAPLKAKEDALSEPALGCFEEIFQSAEPHASCPLENAEEPSFPEVSKRDEGGQLFPKPPEPAACPGPLQMPQQHLFQAIADSPLAPSPPAAPGAVCLAANLLRQPRPAFASQRPQPTGYQGLSAHLRQAVPCSHQPENELSTLKKEKSNDGSAKTARKAPARTGWSWRQPASRREKLAAPSQVAMASFPAAPVPRRLTIFNRIQGGNIYTLTHAAEGARSPAGRDSTGAAPVDGSGCESDVLCRSCLRPRSTGKGLESHGRFGGERWHSAQGKEEQQVCHAGGASHLWLPAAGDGNQPSKPWMPSGNVPVAPLVIPVSVPVSATSSPAGNEVSGKDGVDGKDPGANLHHHMKLLRPKSLFIPPPAAPDAPPGLGGCYRSTLRSPTILVDHLLRDLLQRSPYTPPPMLSPLREGSGLYFSTLCSSSARGDPGRLLSTVLGGASGDLGLCLMNETTKVSVQPHINIGSQFQAEIPELRCGSSLEEDGEAGLLVWKPWGDIATNPATQDRVTKLLHVACSSAVPGGGMNLELALHCLHEAQSNVLEALEMLLFGVPQKSGSHPLADYHYTGSAAWSSLEKDLFEEALAAHGKDFHLIQKKVVWNPKRLCLLWKEDGKMKRKREKKMPRDAGSTSHRRDEAQCQAGSADNQSMFPCSLCGRVFEKIKGRNAHMKKHRPQVKPPEDEMVPEASGSGVEAGQDPKAAGCFCY
SIO_010081: ZNF541
subclass of: SO_0000673
so part of: ZNF541
location: join(465358..465631,466734..466965,467568..468888,469398..469456,470858..471017,471563..471724,472413..472734,473403..473466,473931..474073,474260..474363,474922..474997,475362..475450,476719..476897,477264..477414)
location: region:465358-477414:1
so has part: feature:465358-465631:1:exon
so has part: feature:466734-466965:1:exon
so has part: feature:467568-468888:1:exon
so has part: feature:469398-469456:1:exon
so has part: feature:470858-471017:1:exon
so has part: feature:471563-471724:1:exon
so has part: feature:472413-472734:1:exon
so has part: feature:473403-473466:1:exon
so has part: feature:473931-474073:1:exon
so has part: feature:474260-474363:1:exon
so has part: feature:474922-474997:1:exon
so has part: feature:475362-475450:1:exon
so has part: feature:476719-476897:1:exon
so has part: feature:477264-477414:1:exon

XP_037227845.1
type: Protein
SIO_000068: ncbiprotein

position:465358:1
position: 465358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477414:1
position: 477414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465358-465631:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466734-466965:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467568-468888:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469398-469456:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470858-471017:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471563-471724:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472413-472734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:473403-473466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:473931-474073:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:474260-474363:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:474922-474997:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:475362-475450:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:476719-476897:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477264-477414:1:exon

LOC119140501
type: Gene
subclass of: SO_0000704
RO_0002162: 120794
gene: LOC119140501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(478149..482039)
location: region:478149-482039:-1
so has part: feature:478149-482039:-1:exon
subclass of: SO_0000010

119140501
type: Gene
SIO_000068: ncbigene

position:478149:-1
position: 478149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482039:-1
position: 482039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478149-482039:-1:exon

LOC119140501
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 120794
gene: LOC119140501
product: E3 SUMO-protein ligase ZBED1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_037371905.1
SIO_010081: LOC119140501
subclass of: SO_0000673
so part of: LOC119140501
location: complement(join(478149..480829,481260..481413,481835..482039))
location: region:478149-482039:-1
so has part: feature:481835-482039:-1:exon
so has part: feature:481260-481413:-1:exon
so has part: feature:478149-480829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481835-482039:-1:exon

position:481835:-1
position: 481835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:481260-481413:-1:exon

position:481260:-1
position: 481260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481413:-1
position: 481413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478149-480829:-1:exon

position:480829:-1
position: 480829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119140501
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120794
gene: LOC119140501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 SUMO-protein ligase ZBED1-like
translation: MAGAGSERAPQLPENGAKAEGEAQPKEEATEEPVLPLIPPAVPEENSMVFNAYAMAASKRKREKGSGGGGGQDGASAAFYVDRRKSKVWNYYTKLGDAYVECNVCKKQLSFHNSTTTMREHLVRKHSIRDTLLSQLRDDQSAESDSSAQENAGKRSRQMTPPENVYHAAPCSDPRSDIILELLLEMIFRDLHPLSVVKDKGFGLLVGYLEPNFALPVPAQLAGMLRHRYTVMKRQLERYLQPAQAVVLCVELWPSLLGPLYRSVSACFIDGEWRRARCALETRPAPEGEGEAGEGLCAVLSKFGASGKAVFCVMRDAAADAAQPQGWSGLCCAARTLHRCVAAGLEVEQVREALGAARGIVRYFQQDAKATGSLNGKLEATKRTRLSLALDAEARWLSTAEMCESLLELKWAVMAVLEEHPEGAAAAPRLADGQWKLLQDLVGVLRTVRIAVAFLREEQNASISSLLPCVHGVAAAIGQQAEEAGTGAVIRTVVGNIRAELRRCWGSAEDEKVLENPAVIASFLDPRFKELRFLSPALRNELHQRVKTILSQISNPQAPAGGRFWTLCWDYKAEGGEGNSQPPAPKEQSASAAPQSPYDILLGKDPTESMPEIHQQLENYIVEPLCKRSTNPLDWWKNNEHRFPAVARLSRHFLAIPATATPPEQAFATGESALQHRRAGLAPENLDQILFLHQNFDFLDVVRRGNDPRHRALR
SIO_010081: LOC119140501
subclass of: SO_0000673
so part of: LOC119140501
location: complement(join(478815..480829,481260..481389))
location: region:478815-481389:-1
so has part: feature:481260-481389:-1:exon
so has part: feature:478815-480829:-1:exon

XP_037227802.1
type: Protein
SIO_000068: ncbiprotein

position:478815:-1
position: 478815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481389:-1
position: 481389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481260-481389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478815-480829:-1:exon