Moritella marina ATCC 15381 strain MP-1 plasmid unnamed1, complete sequence.
Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.
Hybrid Assembly of the complete Genome of the Deep-Sea Bacterium Moritella marina from long Nanopore and Illumina reads
Submitted (26-SEP-2019) Institute of Medical Radiation Biology, University Hospital Essen, Hufelandstr. 55, Essen, NRW 45122, Germany
REFSEQ INFORMATION: The reference sequence is identical to\nCP044398.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: CANU v. 1.7\nAssembly Name :: UDE-UoA_MoMari_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 652.0x\nSequencing Technology :: Oxford Nanopore MinION; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/28/2023 04:10:32\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,294\nCDSs (total) :: 4,096\nGenes (coding) :: 4,070\nCDSs (with protein) :: 4,070\nGenes (RNA) :: 198\nrRNAs :: 19, 17, 17 (5S, 16S, 23S)\ncomplete rRNAs :: 19, 17, 17 (5S, 16S, 23S)\ntRNAs :: 141\nncRNAs :: 4\nPseudo Genes (total) :: 26\nCDSs (without protein) :: 26\nPseudo Genes (ambiguous residues) :: 0 of 26\nPseudo Genes (frameshifted) :: 7 of 26\nPseudo Genes (incomplete) :: 19 of 26\nPseudo Genes (internal stop) :: 6 of 26\nPseudo Genes (multiple problems) :: 5 of 26\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_019442226.1
GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_019442223.1
COORDINATES: similar to AA sequence:RefSeq:WP_019442222.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019442221.1
MvaI/BcnI family restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_019442220.1
COORDINATES: similar to AA sequence:RefSeq:WP_019442219.1
COORDINATES: similar to AA sequence:RefSeq:WP_019442218.1
COORDINATES: similar to AA sequence:RefSeq:WP_019442217.1
COORDINATES: similar to AA sequence:RefSeq:WP_019442216.1
COORDINATES: similar to AA sequence:RefSeq:WP_019442214.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019442213.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019442212.1
COORDINATES: similar to AA sequence:RefSeq:WP_004741672.1
COORDINATES: similar to AA sequence:RefSeq:WP_019442210.1
COORDINATES: similar to AA sequence:RefSeq:WP_017061976.1
COORDINATES: similar to AA sequence:RefSeq:WP_019443153.1
COORDINATES: similar to AA sequence:RefSeq:WP_019443266.1
COORDINATES: similar to AA sequence:RefSeq:WP_019443267.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_019442233.1
COORDINATES: similar to AA sequence:RefSeq:WP_019442232.1
COORDINATES: similar to AA sequence:RefSeq:WP_017022609.1
COORDINATES: similar to AA sequence:RefSeq:WP_019442229.1
COORDINATES: similar to AA sequence:RefSeq:WP_019442228.1