Sphingobium cloacae strain JCM 10874 plasmid pSCLO_6.
type: Entry
definition: Sphingobium cloacae strain JCM 10874 plasmid pSCLO_6.
sequence version: NZ_AP017660.1
sequence date: 2022-12-25
sequence: sequence
division: CON
label: NZ_AP017660.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00053320
keyword: RefSeq
source: Sphingobium cloacae
organism: Sphingobium cloacae
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP017660.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: FALCON v. 0.2.1\nGenome Coverage :: 382x\nSequencing Technology :: PacBio RS II\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/25/2022 02:22:01\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,611\nCDSs (total) :: 4,552\nGenes (coding) :: 4,390\nCDSs (with protein) :: 4,390\nGenes (RNA) :: 59\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 3\nPseudo Genes (total) :: 162\nCDSs (without protein) :: 162\nPseudo Genes (ambiguous residues) :: 0 of 162\nPseudo Genes (frameshifted) :: 61 of 162\nPseudo Genes (incomplete) :: 120 of 162\nPseudo Genes (internal stop) :: 14 of 162\nPseudo Genes (multiple problems) :: 28 of 162\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000155
sequence length: 52690
topology: linear
so has quality: SO_0000987
location: 1..52690
location: region:1-52690:1
RO_0002162: 120107

NZ_AP017660
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00053320
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequence of the Nonylphenol-Degrading Bacterium Sphingobium cloacae JCM 10874T
author: Ootsuka, M.
author: Nishizawa, T.
author: Ohta, H.
journal: Unpublished

2
title: Direct Submission
author: Ootsuka, M.
author: Nishizawa, T.
author: Ohta, H.
journal: Submitted (04-OCT-2016) Contact:Tomoyasu Nishizawa Ibaraki University College of Agriculture, Department of Bioresource sience; 3-21-1 Chuou, Ami, Ibaraki 300-0393, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52690:1
position: 52690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-52690:1:source
so part of: sequence
organism: Sphingobium cloacae
mol type: genomic DNA
strain: JCM 10874
culture collection: JCM:10874
type material: type strain of Sphingobium cloacae
plasmid: pSCLO_6
note: type strain of Sphingobium cloacae

120107
type: Taxonomy
SIO_000068: taxonomy

SCLO_RS22215
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22215
so part of: sequence
location: 3..191
location: region:3-191:1
so has part: feature:3-191:1:exon
subclass of: SO_0000010

position:3:1
position: 3
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191:1
position: 191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3-191:1:exon

SCLO_RS22215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686160.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MELGGLVQKAGLVELADDDRATLYGALLELAAKAREDRDRLMLWKRRGKRAFDAEAEGRDAP
SIO_010081: SCLO_RS22215
subclass of: SO_0000673
so part of: SCLO_RS22215
location: 3..191
location: region:3-191:1
so has part: feature:3-191:1:exon

WP_096362280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3-191:1:exon

SCLO_RS22220
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22220
so part of: sequence
location: 188..469
location: region:188-469:1
so has part: feature:188-469:1:exon
subclass of: SO_0000010

position:188:1
position: 188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469:1
position: 469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188-469:1:exon

SCLO_RS22220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004213319.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRLDVEAIRAQVRALDFTRGTPAEVALWREDDADARANLAIEGMDLDLAEHALFDMLREESVPPPLATAIVLKLLDHPDADPTLAISPATIG
SIO_010081: SCLO_RS22220
subclass of: SO_0000673
so part of: SCLO_RS22220
location: 188..469
location: region:188-469:1
so has part: feature:188-469:1:exon

WP_007686159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188-469:1:exon

SCLO_RS22225
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22225
old locus tag: SCLO_6000010
so part of: sequence
location: 466..1401
location: region:466-1401:1
so has part: feature:466-1401:1:exon
subclass of: SO_0000010

position:466:1
position: 466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401:1
position: 1401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466-1401:1:exon

SCLO_RS22225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22225
old locus tag: SCLO_6000010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686157.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HEPN domain-containing protein
translation: MTMRTGLDHLPAVKRRELERVARVLFDEFEDAVKTKLSDKRKGGRILKLILFGSYARGDWVEDRASGYISDYDLLVVVNADTFTDLQTWWAVADDHLVRELTVTRHLATPVNFIVHSLMDVNDQLARGRPFFADIARDGIALYEAPGQALAVPRQLDAQERHAEALRHRDHWFPLAAHALKLARDSIADGVPRDAAFMLHQAVERVYNAVLLVLTLYAPKSHRLGILRSLAENLDPRLIEAWPRDTRAARRHFAQLQRAYVEARYSHAYEITADELAWLVDRVKHLHTIAGAICAEHLAGDDTPEKSPADE
SIO_010081: SCLO_RS22225
subclass of: SO_0000673
so part of: SCLO_RS22225
location: 466..1401
location: region:466-1401:1
so has part: feature:466-1401:1:exon

WP_007686157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466-1401:1:exon

SCLO_RS22230
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22230
so part of: sequence
location: 1394..1666
location: region:1394-1666:1
so has part: feature:1394-1666:1:exon
subclass of: SO_0000010

position:1394:1
position: 1394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666:1
position: 1666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1394-1666:1:exon

SCLO_RS22230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686155.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin VbhA family protein
translation: MNEHPISDDERARRQKAIDFARTNIELSGFALSPGMAALGVRFVAGELSESEYIAAALAHANSLPASAPAQDYFASLAELEAAWEARDRP
SIO_010081: SCLO_RS22230
subclass of: SO_0000673
so part of: SCLO_RS22230
location: 1394..1666
location: region:1394-1666:1
so has part: feature:1394-1666:1:exon

WP_007686155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1394-1666:1:exon

SCLO_RS22235
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22235
old locus tag: SCLO_6000020
so part of: sequence
location: 1714..3405
location: region:1714-3405:1
so has part: feature:1714-3405:1:exon
subclass of: SO_0000010

position:1714:1
position: 1714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3405:1
position: 3405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1714-3405:1:exon

SCLO_RS22235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22235
old locus tag: SCLO_6000020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686152.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MEWFRQLGRAIRNLARIARAQPIWAITALVVSPVALIRHLFGVLVLFLITALVLGIGVPLILGKLLGLPRDSNIYQIVMMLTDLVIILVTLRALFQPLILKYGGPAGDDTHGSARFATDRETRPLAQNGDGLLIGRDRKSGKLLRYAGPAHLLTIAPTRTGKGVGTIIPNLLDYPGPVVCIDPKGENARITACHRAKFGPVHVLDPFGVTGLAPIGSSGAAFNPLDRLDPAGLDLADDAMTLADALVYDAPGEAGEAHWNEEAKALIAGILLWVACDGQAQGEDRTLEAVRDCLTFAPDNFQKMLREMSASTQARGLIARAANRHLGKSDREAAGVLSAAQRHTHFLDSPRMTAVLGRSDFTFADVKAQPTTVYLVLPPDRLATYARWLRLMLAQALTDLARAPASPARPVLFLLDEFAALGRLEPVERAMGLMAGYGIQLWPILQDVHQLRALYERRAGTFLSNAGVLQIFGVNDHDSAKLVSDLLGQETVVFETMSRAIDAEETGISFGSQHVARPLLTPDEVRTMPANLELLFLAGQRPIVATKLAYYADREFAGRFDKP
SIO_010081: SCLO_RS22235
subclass of: SO_0000673
so part of: SCLO_RS22235
location: 1714..3405
location: region:1714-3405:1
so has part: feature:1714-3405:1:exon

WP_054590670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1714-3405:1:exon

SCLO_RS22240
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22240
old locus tag: SCLO_6000030
so part of: sequence
location: complement(3516..6407)
location: region:3516-6407:-1
so has part: feature:3516-6407:-1:exon
subclass of: SO_0000010

position:3516:-1
position: 3516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6407:-1
position: 6407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3516-6407:-1:exon

SCLO_RS22240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22240
old locus tag: SCLO_6000030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010512303.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRRVTLTDRQREALLHLPVDQGELLRHYTLSDEDLGHIRQRRRAHNRFGFALQLCVLRYPGRVLAPGELIPAQVSDFIAAQLGLTSDDLLLYAAREETRHEHLADLRRIYGYRSFSGRGARDLREWIAREAEAATSNEDLARRFVAECRRTRTILPGSSTIERLCADALVEAERRIEDLIAHRITPTLSENLAHLLEDTVDGRVTRFVWLRQFEVGANSAAANRLMDRLEYLQRFDLPADLLDGVPAHRVTRLRRQGERYYADGMRDLPEDRRLAILAVCTLEWRSSLADVIVETHDRIVGRLYRASERLCNTRIADEKAAVRDTLKSFAEIGGALLGAQDDGTALDGIIATGPGWERFRTLVATASALTNVLAADPLSRVLDGYHRFRLYAPRMLRLLDMQAAPIATPLLAAVAMLRNGIKVDPPVDFLRPNSKWHRHLRAEPSGDHRLWEIAVLFHIRDAFRSGDIWLAGSRRYGDLKQLLVPPQAIEQTARLAVPLRPGEWLAERRARLDTRLKEFGRAARTGTIPGGIIENGKLHIDKLRADTPEGAEDLVLDLYQQLPPARITDLLLEVDERTGFSEAFTHLRTGAPCSDRIGLMNVLLAEGVNLGLRKMAAATNTHSFWELLRIARWHVEGSAYDRALAMIVEAHAALPMAAFWGQGQSASSDGQFFLATEQGEAMNLINAKYGNVPGLKGYSHVSDQYAPFATQVIPATVSEAPYILDGLLMNDAGRRVRQHFADTGGFTDHVFAACALLGYRFAPRIRDLPQKRLYAFTPNATPANVRALVGGKINEPLIERNWPDILRIMATIAAGIVAPSQILRKLASYPRQNELALALREVGRIERTLFMIDWILDAGLQRQAQIGLNKGEAHHALKRAISFHRRGEIRDRSGEGQHYRIAGMNLLAAIIIFWNTMKLGEVVNTRAASGTHIAPDLLAHVSPLGWEHINLTGEYRWPKSLA
SIO_010081: SCLO_RS22240
subclass of: SO_0000673
so part of: SCLO_RS22240
location: complement(3516..6407)
location: region:3516-6407:-1
so has part: feature:3516-6407:-1:exon

WP_016746447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3516-6407:-1:exon

SCLO_RS22245
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22245
old locus tag: SCLO_6000040
pseudo: true
so part of: sequence
location: 6533..>7135
location: region:6533-7135:1
so has part: feature:6533-7135:1:exon
subclass of: SO_0000010

position:6533:1
position: 6533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7135:1
position: 7135
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6533-7135:1:exon

SCLO_RS22245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22245
old locus tag: SCLO_6000040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000904895.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: recombinase family protein
SIO_010081: SCLO_RS22245
subclass of: SO_0000673
so part of: SCLO_RS22245
location: 6533..>7135
location: region:6533-7135:1
so has part: feature:6533-7135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6533-7135:1:exon

SCLO_RS22250
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22250
old locus tag: SCLO_6000050
so part of: sequence
location: complement(7210..8076)
location: region:7210-8076:-1
so has part: feature:7210-8076:-1:exon
subclass of: SO_0000010

position:7210:-1
position: 7210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8076:-1
position: 8076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7210-8076:-1:exon

SCLO_RS22250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22250
old locus tag: SCLO_6000050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006953933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MTRVGYARVSTIDQDLDIQVARLKAAGCEILRSETGSGASRTGRTELETIMQFLRADDELVVLRLDRLGRSTRDVLNLVHELDQKGASLRVLEPEVTTAGSMGRMVITILGMVADMELTFIKDRQRAGIEAARAEGVYKGRKKNIDDDEIRRRITAGASKASVARDLKISRMTVYRALDVIPSRIGLPEKPPSVTIALHLTIENFNKHGRGRKPARERIEAMLERDYQMQKTGNCDYTLTVAYDQGADGVSLDDEIASLQTEMFNIAESYRCSIETDVYEIGGQERAW
SIO_010081: SCLO_RS22250
subclass of: SO_0000673
so part of: SCLO_RS22250
location: complement(7210..8076)
location: region:7210-8076:-1
so has part: feature:7210-8076:-1:exon

WP_006961816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7210-8076:-1:exon

SCLO_RS22255
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22255
old locus tag: SCLO_6000060
so part of: sequence
location: complement(8219..11059)
location: region:8219-11059:-1
so has part: feature:8219-11059:-1:exon
subclass of: SO_0000010

position:8219:-1
position: 8219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11059:-1
position: 11059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8219-11059:-1:exon

SCLO_RS22255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22255
old locus tag: SCLO_6000060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010442269.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MTGKAETARLGLAVQLRFFAGHGFFVPDHASIPSDGVLYLAEQLGLDAKSVNHYDFSGRTARRHCAEILRHLGFRRMTQTDRRALSRWISDDLCAGGQPINAMLEHVFLWCRDRRIYGPSRKELERLVRSQRHLYLEALLARVRDRLAPDAVALLEASLADPDGPTGFNTMKGDAGQATLENILGVTAKLAFIQRLALPRDFLSVTGKAWVDQIVRRVAGEKASEMRRHVPARQLGLYAVYLMAREAQLTDAMVDLLIETVHKIGSRSKRKVVGDIAKDIERVYGKERLLVEIASASIDDPSGRICDVIFPIAGKDKLAAIIKESQAKGALDRRIYKVMRRSWANHYRRMLPSLLSALEFRSNNAVWRPVLAALDWIRSKVDDGCRYVPPHAVPVDEVIPARWRSSVIDEEGRVNRISYELCVLAQLRDRIRSKEIWVVGADRYRNPDDDLPKDFDARREAYYTGLNLTADARAFSSAIREELAQELLLLNANIPRNDKVRLLWRGENRISLTPFKPLPEPRGLASIKTEIGQRWPMTGLLDVLKEAALDTGLLEAFETSASRVALPKTALDQRLLLCLYGLGTNAGLKRIAGATPDVSYEELLHVHRRFVHAAALKEACARVANATLAIRNAAVWGDAGTACASDSTKFGAWDRNLMTEWHARYGGRGVMIYWHVERRATCVYSQLKRCSSSEVASMIEGVLRHCTDMEIQRQYVDSHGQSAVGFAFCRLLGFELAPRLKAIARQKLALPDVGMRTRLPHLQPILSSPINWDEIEQQYDEMVKYAAAMQTKTADPEAILRRFSRSEVMHPTYKALSELGRAVKTIFLCRYLREESFRREIHEGLNVVENWNSANGFVFFGKGGEIATNRIDEQQLSVLALHLLQASLVYVNTRMLQSVLVEPKWTGRMTPDDYRGLTPLIYSHVNPYGRFDLDLNSRIDFGRLAA
SIO_010081: SCLO_RS22255
subclass of: SO_0000673
so part of: SCLO_RS22255
location: complement(8219..11059)
location: region:8219-11059:-1
so has part: feature:8219-11059:-1:exon

WP_231382236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8219-11059:-1:exon

SCLO_RS22260
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22260
old locus tag: SCLO_6000070
so part of: sequence
location: 11067..11789
location: region:11067-11789:1
so has part: feature:11067-11789:1:exon
subclass of: SO_0000010

position:11067:1
position: 11067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11789:1
position: 11789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11067-11789:1:exon

SCLO_RS22260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22260
old locus tag: SCLO_6000070
inference: COORDINATES: protein motif:HMM:NF012792.2
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
translation: MSEKLRLQEPIRSPLETPRLITPLPYRSGTSFLAWAIVNNNQPVPDVFSKMTKIAASGRLGQNAMMMTGAPIKLTQADAADVADLYNRCSDYFLLQDGAAPTLDDARELFSDVPPEKSAHNQAVLGWKGPGGLYAIAAILRDYPRDGTWYLGFMIVDAAQRGRGVGRSIYSTVESWAAARGATEIRLAVLEANEAAERFWRSLGFIEYRRVGPDTFKMRSHRRIELSRRLSGATVEGSNK
SIO_010081: SCLO_RS22260
subclass of: SO_0000673
so part of: SCLO_RS22260
location: 11067..11789
location: region:11067-11789:1
so has part: feature:11067-11789:1:exon

WP_231923481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11067-11789:1:exon

SCLO_RS22265
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22265
old locus tag: SCLO_6000080
so part of: sequence
location: 11889..12284
location: region:11889-12284:1
so has part: feature:11889-12284:1:exon
subclass of: SO_0000010

position:11889:1
position: 11889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12284:1
position: 12284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11889-12284:1:exon

SCLO_RS22265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22265
old locus tag: SCLO_6000080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017501681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAYGESGSAPLPAIRDEVLELHAAITDEESRLGLMRIFNLVCDLVAVHLQETNGNVEAFAQHRQGQIWMFLRAECLVDGVLDRDRLRYVTGREVQAGRMTEDDPLRRYALGDDSAFDGLMAAPPPQKRTRH
SIO_010081: SCLO_RS22265
subclass of: SO_0000673
so part of: SCLO_RS22265
location: 11889..12284
location: region:11889-12284:1
so has part: feature:11889-12284:1:exon

WP_051886961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11889-12284:1:exon

SCLO_RS22270
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22270
old locus tag: SCLO_6000090
so part of: sequence
location: 13154..14266
location: region:13154-14266:1
so has part: feature:13154-14266:1:exon
subclass of: SO_0000010

position:13154:1
position: 13154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14266:1
position: 14266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13154-14266:1:exon

SCLO_RS22270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22270
old locus tag: SCLO_6000090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008832586.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MTIDPSPSLFDAPIAAPVSAVDGDDRTPLLPVRHPNQDLFICDVLDAIPKDDMASMEHPVFSLSTKPDNRTRRYEHNGNVIEIIPSGKGLATIHDKDILIYCISQLVAKMNQGEQPSRTVRLQAYDMLVATNRQTSGEGYRLMADALTRLRGTTVRTNIQTGGVEETRIFGLIEEAKITRKTFDGRMLDLEITLSDWVYRSVISKNVLTLHRDYFRLRKPFERRMYELARKHCGVKDEWKIGLELLQKKCGSNSPLRVFRALVKKVCEHDADHGHFPDYAVTMDDDVILFRNRSGLKSKPDPVASAGDDAPYIDPETMHDAKTAAPGYDVYALYDEWVSWWHDMGKPELKSPAGAFLGFCKKRHERKPLR
SIO_010081: SCLO_RS22270
subclass of: SO_0000673
so part of: SCLO_RS22270
location: 13154..14266
location: region:13154-14266:1
so has part: feature:13154-14266:1:exon

WP_007686147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13154-14266:1:exon

SCLO_RS22275
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22275
old locus tag: SCLO_6000100
so part of: sequence
location: complement(14330..14644)
location: region:14330-14644:-1
so has part: feature:14330-14644:-1:exon
subclass of: SO_0000010

position:14330:-1
position: 14330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14644:-1
position: 14644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14330-14644:-1:exon

SCLO_RS22275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22275
old locus tag: SCLO_6000100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013041578.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRKGSLLALRDRDAAPAPAMVEPEGRAAAPIARGTGAGSGSGSSSNPVAPSRQGKKAMTGYFSPEMSFAMHMTARKHGMSLQDAMAEAFNDWLRKMGESPVGK
SIO_010081: SCLO_RS22275
subclass of: SO_0000673
so part of: SCLO_RS22275
location: complement(14330..14644)
location: region:14330-14644:-1
so has part: feature:14330-14644:-1:exon

WP_007686146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14330-14644:-1:exon

SCLO_RS22280
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22280
old locus tag: SCLO_6000110
so part of: sequence
location: complement(14641..15294)
location: region:14641-15294:-1
so has part: feature:14641-15294:-1:exon
subclass of: SO_0000010

position:14641:-1
position: 14641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15294:-1
position: 15294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14641-15294:-1:exon

SCLO_RS22280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22280
old locus tag: SCLO_6000110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012554518.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MPTIAIISQKGGAGKTTLALHLAAAAEDSGHTALVIDVDPQATASQWAAWRQDAPPVVIDSAPPRLAAKIEQATGQGAAFIVIDTPPHADSAASAAVEAADLVLIPCRPSAFDLAAIKTTASLVKMRGKPAFVIFTAGSPTAPRMYDEAAQLVQDYGLDACPHHIADRAAFRHAAAEGKTAMEIEPSGKAADEVRQLYKWTCEHVNMQASRKRRANA
SIO_010081: SCLO_RS22280
subclass of: SO_0000673
so part of: SCLO_RS22280
location: complement(14641..15294)
location: region:14641-15294:-1
so has part: feature:14641-15294:-1:exon

WP_007686145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14641-15294:-1:exon

SCLO_RS22285
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22285
old locus tag: SCLO_6000120
so part of: sequence
location: complement(15421..16062)
location: region:15421-16062:-1
so has part: feature:15421-16062:-1:exon
subclass of: SO_0000010

position:15421:-1
position: 15421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16062:-1
position: 16062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15421-16062:-1:exon

SCLO_RS22285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22285
old locus tag: SCLO_6000120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008831324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SprT-like domain-containing protein
translation: MEQDNRESWLNRVAAGMAPLFAALDAPLPARIRVAIGFTSSGRKGKAIGECWDNRLSADGHFEIFIRPDLAHAPDAMPAQIAAILAHELVHAAVGIPAGHGKAFKRIALGLGLVGPMRATTPGEAFLAAVAPILDAVGPLPHARLDTDGESTAPKKQKTRMLKCECATCGYTVRTARKWLELAGAPLCPIEDHGRMEHEPLDDGSEDEGGDDG
SIO_010081: SCLO_RS22285
subclass of: SO_0000673
so part of: SCLO_RS22285
location: complement(15421..16062)
location: region:15421-16062:-1
so has part: feature:15421-16062:-1:exon

WP_008831324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15421-16062:-1:exon

SCLO_RS22295
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22295
old locus tag: SCLO_6000130
so part of: sequence
location: 16477..16758
location: region:16477-16758:1
so has part: feature:16477-16758:1:exon
subclass of: SO_0000010

position:16477:1
position: 16477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16758:1
position: 16758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16477-16758:1:exon

SCLO_RS22295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22295
old locus tag: SCLO_6000130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017503755.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MAATAFVRARIDETLKDEAAAVLAELGLTVSDVVRMTLTRVAKDHALPFELKVPNAETRAAIESSRATMKARRARFTDPKELFDALDQEARQQ
SIO_010081: SCLO_RS22295
subclass of: SO_0000673
so part of: SCLO_RS22295
location: 16477..16758
location: region:16477-16758:1
so has part: feature:16477-16758:1:exon

WP_007685985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16477-16758:1:exon

SCLO_RS22300
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22300
old locus tag: SCLO_6000140
so part of: sequence
location: 16727..17047
location: region:16727-17047:1
so has part: feature:16727-17047:1:exon
subclass of: SO_0000010

position:16727:1
position: 16727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17047:1
position: 17047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16727-17047:1:exon

SCLO_RS22300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22300
old locus tag: SCLO_6000140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685988.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MPSTKKPASSKRASFPREASYEKRFVKDWERLSRSGRYNMNQLKEAMMLLIANDAPLGPEWLDHALKGDWSDHRECHIGGDFLLIYTIEGNLVNFVRAGTHSELFE
SIO_010081: SCLO_RS22300
subclass of: SO_0000673
so part of: SCLO_RS22300
location: 16727..17047
location: region:16727-17047:1
so has part: feature:16727-17047:1:exon

WP_007685988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16727-17047:1:exon

SCLO_RS22305
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22305
old locus tag: SCLO_6000150
so part of: sequence
location: 17083..17502
location: region:17083-17502:1
so has part: feature:17083-17502:1:exon
subclass of: SO_0000010

position:17083:1
position: 17083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17502:1
position: 17502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17083-17502:1:exon

SCLO_RS22305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22305
old locus tag: SCLO_6000150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007685989.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XRE family transcriptional regulator
translation: MNADDMKVETFACVFDAIADTPEEATELRTRADLMRGITARVKSWDVPLGEAAKRLGLTPPRLNDLLRGKFNRFSLDDLMTAATAAGIAPPAPRKSSWDDLRGIVKGNGARFTIEEINDAIAEAGAAAGMAGMNDHDGD
SIO_010081: SCLO_RS22305
subclass of: SO_0000673
so part of: SCLO_RS22305
location: 17083..17502
location: region:17083-17502:1
so has part: feature:17083-17502:1:exon

WP_007685989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17083-17502:1:exon

SCLO_RS22310
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22310
so part of: sequence
location: 17554..17715
location: region:17554-17715:1
so has part: feature:17554-17715:1:exon
subclass of: SO_0000010

position:17554:1
position: 17554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17715:1
position: 17715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17554-17715:1:exon

SCLO_RS22310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22310
inference: COORDINATES: protein motif:HMM:NF013540.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MRQESGLSQAGFARLLWAHKRTVQRWEAGTMRPTGAALALLTLVKRRGIQILT
SIO_010081: SCLO_RS22310
subclass of: SO_0000673
so part of: SCLO_RS22310
location: 17554..17715
location: region:17554-17715:1
so has part: feature:17554-17715:1:exon

WP_015449421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17554-17715:1:exon

SCLO_RS22315
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22315
so part of: sequence
location: 17729..17935
location: region:17729-17935:1
so has part: feature:17729-17935:1:exon
subclass of: SO_0000010

position:17729:1
position: 17729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17935:1
position: 17935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17729-17935:1:exon

SCLO_RS22315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013038659.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGHRPFSDLMKDWSPERRARNEAHKAKLEAELMGRAATRDAIEELEAGKGVRFTSVEALMSDLHDDD
SIO_010081: SCLO_RS22315
subclass of: SO_0000673
so part of: SCLO_RS22315
location: 17729..17935
location: region:17729-17935:1
so has part: feature:17729-17935:1:exon

WP_008831325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17729-17935:1:exon

SCLO_RS24140
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS24140
so part of: sequence
location: complement(17907..18134)
location: region:17907-18134:-1
so has part: feature:17907-18134:-1:exon
subclass of: SO_0000010

position:17907:-1
position: 17907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18134:-1
position: 18134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17907-18134:-1:exon

SCLO_RS24140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS24140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008831326.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGEIACADLAAPSPITGDVGDRASSLQFVAGFRRPIRHLVENAVEITHRTTFGAPREKLGRRFGSINRHHGDQT
SIO_010081: SCLO_RS24140
subclass of: SO_0000673
so part of: SCLO_RS24140
location: complement(17907..18134)
location: region:17907-18134:-1
so has part: feature:17907-18134:-1:exon

WP_008831326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17907-18134:-1:exon

SCLO_RS22325
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22325
so part of: sequence
location: 18272..18499
location: region:18272-18499:1
so has part: feature:18272-18499:1:exon
subclass of: SO_0000010

position:18272:1
position: 18272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18499:1
position: 18499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18272-18499:1:exon

SCLO_RS22325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017503387.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4160 domain-containing protein
translation: MVTMFRGPRWKIAVYGRDHGVPHFHIEGPDFRCSVAIASFDVIVGTVSAAVLKDALEWARPNQALLMQTWQELNG
SIO_010081: SCLO_RS22325
subclass of: SO_0000673
so part of: SCLO_RS22325
location: 18272..18499
location: region:18272-18499:1
so has part: feature:18272-18499:1:exon

WP_020817904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18272-18499:1:exon

SCLO_RS22330
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22330
old locus tag: SCLO_6000160
so part of: sequence
location: 18496..18948
location: region:18496-18948:1
so has part: feature:18496-18948:1:exon
subclass of: SO_0000010

position:18496:1
position: 18496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18948:1
position: 18948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18496-18948:1:exon

SCLO_RS22330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22330
old locus tag: SCLO_6000160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008831328.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2442 domain-containing protein
translation: MNITDKARTITAVRATGPSSLHLSWSEGTAADLDLGAVLADRAFAALRDPGEFAKVEVGDWGHSLAWPSGAELGADMLWLETLSATGHGDVRAFLEWRLRHALSLSKAADALGVSRRMVAYYSNGEKKVPKPILLACRGWEASNGLYRAA
SIO_010081: SCLO_RS22330
subclass of: SO_0000673
so part of: SCLO_RS22330
location: 18496..18948
location: region:18496-18948:1
so has part: feature:18496-18948:1:exon

WP_008831328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18496-18948:1:exon

SCLO_RS22335
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22335
old locus tag: SCLO_6000170
so part of: sequence
location: 18955..19575
location: region:18955-19575:1
so has part: feature:18955-19575:1:exon
subclass of: SO_0000010

position:18955:1
position: 18955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19575:1
position: 19575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18955-19575:1:exon

SCLO_RS22335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22335
old locus tag: SCLO_6000170
EC number: 3.1.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004213387.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: histidine phosphatase family protein
translation: MRAIFIRHGENTGNAGVPCHDLATIALTERGHEQARAVAASWTQAPALIVTSPYTRTRQTAAPTIARFPGVPVEVWPIEEFTYLQPARWNGTRSAERMPHLERYWREADPDYCDGEGAESFSTLLRRCEAALTRLAAMPAGSLAYVFGHGQFIQAARAIVADAHLDDRAKMRAFWRKGEPPAIGNAQRVGFHWQGDRWTCAPALAA
SIO_010081: SCLO_RS22335
subclass of: SO_0000673
so part of: SCLO_RS22335
location: 18955..19575
location: region:18955-19575:1
so has part: feature:18955-19575:1:exon

WP_008831329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18955-19575:1:exon

SCLO_RS22340
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22340
old locus tag: SCLO_6000180
so part of: sequence
location: complement(19640..20407)
location: region:19640-20407:-1
so has part: feature:19640-20407:-1:exon
subclass of: SO_0000010

position:19640:-1
position: 19640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20407:-1
position: 20407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19640-20407:-1:exon

SCLO_RS22340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22340
old locus tag: SCLO_6000180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015918564.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6 family transposase
translation: MSGFKGRHFEGEIVLWAVRWYCRYGISYRDLEQMMGERGVNVDHSTIYRWVQRYAPEIEKRLRWQWRRPASTSWRVDETYIKVRGAWTYLYRAVDKDGNTIDFYLSPTRNTKAAKRFLGKALGGLKDWEKPEIINTDKAPTYTAAIAELKAEGKCPKDTQHRQVKYLNNVVEADHGKLKQLIRPVRGFKTLKTAYATIKGFEVMRALRKGQAAAFNLTRDICGEARLVERAFGLGACALTEAIQLIGKRMELEAA
SIO_010081: SCLO_RS22340
subclass of: SO_0000673
so part of: SCLO_RS22340
location: complement(19640..20407)
location: region:19640-20407:-1
so has part: feature:19640-20407:-1:exon

WP_066521070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19640-20407:-1:exon

SCLO_RS22345
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22345
old locus tag: SCLO_6000190
so part of: sequence
location: 20476..21513
location: region:20476-21513:1
so has part: feature:20476-21513:1:exon
subclass of: SO_0000010

position:20476:1
position: 20476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21513:1
position: 21513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20476-21513:1:exon

SCLO_RS22345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22345
old locus tag: SCLO_6000190
inference: COORDINATES: protein motif:HMM:NF012312.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MFLGSLSDRIGRRKVLIPSLIFFSLASGVSGLAGGFMSLLLIRGVMGVAEGAFCPTSFAAVAEASKPSRIGFNQGLQQSMFALFGLGFGPFIAAWLLSFTTWRGVFLLVTVPGLILSALIWMCIRDRTPAATQSDSVSHRPSEPSASIGQVLKVRNVRIGMLGLLCAMCGIFTLAAFAPLYLTEHLHLDAWAAASAASAIGFGGFAGQWILPTLSDIYGRRPMAILGFLGGAIFVFAFINTGASILPLFGTLFGATVCSFGLLSLISGPIAAESAPPGMVSTAAGLIIGVGEVFGGGLALVVAGYLIATYGIQSMLYLALGGLAIGVLLMFFLKETAPRKLAITD
SIO_010081: SCLO_RS22345
subclass of: SO_0000673
so part of: SCLO_RS22345
location: 20476..21513
location: region:20476-21513:1
so has part: feature:20476-21513:1:exon

WP_066521073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20476-21513:1:exon

SCLO_RS22350
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
gene: istB
locus tag: SCLO_RS22350
old locus tag: SCLO_6000200
so part of: sequence
location: complement(21623..22486)
location: region:21623-22486:-1
so has part: feature:21623-22486:-1:exon
subclass of: SO_0000010

position:21623:-1
position: 21623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22486:-1
position: 22486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21623-22486:-1:exon

SCLO_RS22350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
gene: istB
locus tag: SCLO_RS22350
old locus tag: SCLO_6000200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008833340.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MTKAHNVDAQRLSFILNELRLPAIKVIWPEFTERADKEGWPATRLLAALTEHEMAERDRRRIERHLSDARLPPGKTLDSFAFDAVPMVSRAQVTAMTSGDGWLEKGANLILFGPPGGGKSHLAAAIGLQLVQNGWRVLFTRTSELVQKLQLARRELALESAIAKLDKYHLLILDDLAYVAKDQAETSVLFELISARYERRSMLITANQPFGEWNRVFPDPAMTLAAVDRLVHHATIFEMNVESYRRRAALQRQTGAGRTPKYATIKSIEKMSISDNQSEESPLPATI
SIO_010081: SCLO_RS22350
subclass of: SO_0000673
so part of: SCLO_RS22350
location: complement(21623..22486)
location: region:21623-22486:-1
so has part: feature:21623-22486:-1:exon

WP_004211466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21623-22486:-1:exon

SCLO_RS22355
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
gene: istA
locus tag: SCLO_RS22355
old locus tag: SCLO_6000210
so part of: sequence
location: complement(22483..23955)
location: region:22483-23955:-1
so has part: feature:22483-23955:-1:exon
subclass of: SO_0000010

position:22483:-1
position: 22483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23955:-1
position: 23955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22483-23955:-1:exon

SCLO_RS22355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
gene: istA
locus tag: SCLO_RS22355
old locus tag: SCLO_6000210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053314.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MRLFMKLRQTNPVPVAAAKAGFSTATGYRIASDPVLPSHRKAPRGRRRPDPLESIFESEIVPMLKAAPGLRAVAIFEEMRRRHPDLDFGVRRTMERRIRAWRAVHGPEQEVIFRQTHEPGRMGLSDFTDMRSLKVTIAGAPLDHLLYHFRLVWSGFEHAHVILGGESYVALAEGLQNALWMLGGAPGEHRSDSLSAAFRNLDADARADLTTRYDALCEHYGMTPTRNNRGIAHENGSVESSHGHLKAAVEDALAMRGSTDFEDLAAYRRFIDEIVARKNRRSAARIDTERATLKPLPDRRTSDYEEHILPVTSSSTFVLRKVFYTVPSRLIGHRLRVRLYDDRLDLFLGGSYLMTRPRGRPKSATEHGYVVDYRHVIHSLRRKPMALLQLTYRDQLFPREAYRLMFERLLEAMSERDACRKMVELLSMAHERACEAELADLLAQDLDEGRLPDIAALRTRFSPDPAALPEVVVELGPLTDYDALLLGEAA
SIO_010081: SCLO_RS22355
subclass of: SO_0000673
so part of: SCLO_RS22355
location: complement(22483..23955)
location: region:22483-23955:-1
so has part: feature:22483-23955:-1:exon

WP_161626247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22483-23955:-1:exon

SCLO_RS22360
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22360
old locus tag: SCLO_6000220
so part of: sequence
location: complement(24605..25375)
location: region:24605-25375:-1
so has part: feature:24605-25375:-1:exon
subclass of: SO_0000010

position:24605:-1
position: 24605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25375:-1
position: 25375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24605-25375:-1:exon

SCLO_RS22360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22360
old locus tag: SCLO_6000220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020648694.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IclR family transcriptional regulator C-terminal domain-containing protein
translation: MSEPHPDFMQSLARGLQVLEAFRELGAGQSIASLSTHTDLPRGVIARCLYTLSELGYVGRRERLYHVLPGVLRLADAFLSDRSLSALAQPVLEGLRDELDESCSLAVLDGAEILYVARASRSRIMSIGLHVGSRLPAWVTSMGRVLLASLAPAERDTLLPQEPLPRLTPLTLVDRAALEKVLEGVVGNGYAIVDQELEIGLRSIAVPVCNEAGCTIGALNVGTNALERSLQDLEKTILPALTRAASSLGRQAHLSG
SIO_010081: SCLO_RS22360
subclass of: SO_0000673
so part of: SCLO_RS22360
location: complement(24605..25375)
location: region:24605-25375:-1
so has part: feature:24605-25375:-1:exon

WP_066521082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24605-25375:-1:exon

SCLO_RS22365
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
gene: pcaF
locus tag: SCLO_RS22365
old locus tag: SCLO_6000230
so part of: sequence
location: complement(25444..26646)
location: region:25444-26646:-1
so has part: feature:25444-26646:-1:exon
subclass of: SO_0000010

position:25444:-1
position: 25444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26646:-1
position: 26646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25444-26646:-1:exon

SCLO_RS22365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
gene: pcaF
locus tag: SCLO_RS22365
old locus tag: SCLO_6000230
EC number: 2.3.1.174
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007248855.1
GO function: GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO process: GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoadipyl-CoA thiolase
translation: MAHAFLCDAVRTPIGRFGGALAPVRADDLAAIPIKALLERNSGLDPAAIEEVFLGSANQAGEDNRNVARMAALLSGLPTNVPGTTLNRLCASGADAVGTAARAVVSGQIDLAIAGGVESMTRAPLVMGKAEKAWSRTPSIEDTTIGWRFVNPAMKALYGVDSMPETGENVARDYGVSRADQDFFALRSQQRAAVSQANGFFAEEIVPVTITGRKGNVIVDRDEHPRPETTAEALAKLKPIVHTDGTVTAGNASGVNDGAAAMLIASEAALKAHGLTPRARVLGMATAGVEPRVMGIGPVPASRKLLARLGLTIDDFDLIEINEAFASQVIASMRELGVDPGDERLNPNGGAIALGHPLGMSGARLALTAAHSLQQSGGKRALVTMCIGVGQGLALALERA
SIO_010081: SCLO_RS22365
subclass of: SO_0000673
so part of: SCLO_RS22365
location: complement(25444..26646)
location: region:25444-26646:-1
so has part: feature:25444-26646:-1:exon

WP_066521085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25444-26646:-1:exon

SCLO_RS22370
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22370
old locus tag: SCLO_6000240
so part of: sequence
location: complement(26646..27323)
location: region:26646-27323:-1
so has part: feature:26646-27323:-1:exon
subclass of: SO_0000010

position:27323:-1
position: 27323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26646-27323:-1:exon

SCLO_RS22370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22370
old locus tag: SCLO_6000240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010215008.1
GO function: GO:0008410 - CoA-transferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoacid CoA-transferase subunit B
translation: MMTQNTSGWSREQMAERAARELEDGYYVNLGIGIPTLVANYVPHDIEVTLQSENGMLGMGPFPYADEVDPDLINAGKQTITQLPTSSFFSSADSFAMIRGGHIDLTVLGAMEVSASGDIANWTIPGKMVKGMGGAMDLVAGVKRVVVVMEHCNKHGAPKILEECSLPLTGQNVVDLIVTDLCVLACDKVAGGLTLVELAPGITAEQVVSSTAAAVDISAFEAEAA
SIO_010081: SCLO_RS22370
subclass of: SO_0000673
so part of: SCLO_RS22370
location: complement(26646..27323)
location: region:26646-27323:-1
so has part: feature:26646-27323:-1:exon

WP_217998389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26646-27323:-1:exon

SCLO_RS22375
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22375
old locus tag: SCLO_6000250
so part of: sequence
location: complement(27320..28030)
location: region:27320-28030:-1
so has part: feature:27320-28030:-1:exon
subclass of: SO_0000010

position:27320:-1
position: 27320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28030:-1
position: 28030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27320-28030:-1:exon

SCLO_RS22375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22375
old locus tag: SCLO_6000250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007405018.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CoA transferase subunit A
translation: MPRKIFDDPRAALEGLLFDGMTIMSGGFGLSGNPESLIPEIRSAGVKGLTVISNNAGADGFGLWALLESRQVRKMISSYVGENKLFEQQYLSGELELELNPQGTLAERIRAGGAGIPAFYTATGVGTVVAEGKPVEEFDGKAYVRETWLRADLAIIKAWRADPSGNLMFRKTARNFNPNMATAAKVTVVEVEEIVEPGTFDPDTIHTPGIYVDRIVLSTINEKRIEKLTTRERESA
SIO_010081: SCLO_RS22375
subclass of: SO_0000673
so part of: SCLO_RS22375
location: complement(27320..28030)
location: region:27320-28030:-1
so has part: feature:27320-28030:-1:exon

WP_066521087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27320-28030:-1:exon

SCLO_RS22380
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22380
old locus tag: SCLO_6000260
so part of: sequence
location: 28237..29082
location: region:28237-29082:1
so has part: feature:28237-29082:1:exon
subclass of: SO_0000010

position:28237:1
position: 28237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29082:1
position: 29082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28237-29082:1:exon

SCLO_RS22380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22380
old locus tag: SCLO_6000260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008996022.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MRPEHQIVQSSDTLGWRSLYASHQFERPYSDRFEGRDDHLIIVHLSGPVRVERNLSGEQEKQRIAPGGLFVLPPNQDFGVSLTAPLETIHLYIRRSLIRAAAQELCKGDPEKVEFLPRFGERDPLIEQMGRMVCGMMADNQSDFFADGVARLLAAQIVRHHSCGLQAELPRITGLNQRQLEAVHDVIEERMEESLSIDDLAEAVGLSPIHFARQFKRSTGKAPHQYLIEMRVSRARHLLAGDLPIAEIAYRCGFSHQEHLTRLFGRQQGTTPAAYRRALRL
SIO_010081: SCLO_RS22380
subclass of: SO_0000673
so part of: SCLO_RS22380
location: 28237..29082
location: region:28237-29082:1
so has part: feature:28237-29082:1:exon

WP_231923482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28237-29082:1:exon

SCLO_RS22385
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22385
old locus tag: SCLO_6000270
so part of: sequence
location: 29341..29853
location: region:29341-29853:1
so has part: feature:29341-29853:1:exon
subclass of: SO_0000010

position:29341:1
position: 29341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29853:1
position: 29853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29341-29853:1:exon

SCLO_RS22385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22385
old locus tag: SCLO_6000270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008996021.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxyquinol 1,2-dioxygenase
translation: MADVVTKFGALTDYRKGGVEIIDDDPRNYVFSNVFEVAANAAPYERVAVGKNFEYVIESARAEGTSGWFSCAHDEFVLAMDGQIEVHLLKLDNSDAYVDPDSEGAVAIGEALPEGRKMGRIVLRRGHMALLPVGAAYRFYAEQPAAMLFQSIEGAVTVQKWGEICQTEAA
SIO_010081: SCLO_RS22385
subclass of: SO_0000673
so part of: SCLO_RS22385
location: 29341..29853
location: region:29341-29853:1
so has part: feature:29341-29853:1:exon

WP_066521091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29341-29853:1:exon

SCLO_RS22390
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22390
old locus tag: SCLO_6000280
so part of: sequence
location: 29899..30924
location: region:29899-30924:1
so has part: feature:29899-30924:1:exon
subclass of: SO_0000010

position:29899:1
position: 29899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30924:1
position: 30924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29899-30924:1:exon

SCLO_RS22390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22390
old locus tag: SCLO_6000280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008996020.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydroxyquinol 1,2-dioxygenase
translation: MAMSEALEIIDFGDSKARTDTEHLAINNETGYRSFRAGGFTFTRDEYFARLTWPGGSHIIPIDAFLRAMMRDVAWGFFYGVVNFDHVFGTINHYGEVTMFAGRFNDAYRNAGRDHEERFKSSALMAVFKDILSDWTVEGYDPFAAPMETGLPWGIKNGNNDEAISRQRVTARRMVGLPGDTPVRTDANGFPVNRQFADVPQEQPVVEAEPGFEAEVSAYNLFGYLSRSDVTWNPSVCSVVGDSLFCPTSEEFILPVEHGNDRCEWFLQLSDEIVWDVKDKESGKPRARVTARAGDICCMPADIRHQGYSTKRSMLLVWENGSPKIPQMIADGTAPVVPVTF
SIO_010081: SCLO_RS22390
subclass of: SO_0000673
so part of: SCLO_RS22390
location: 29899..30924
location: region:29899-30924:1
so has part: feature:29899-30924:1:exon

WP_066521100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29899-30924:1:exon

SCLO_RS24250
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS24250
old locus tag: SCLO_6000290
so part of: sequence
location: 30989..32122
location: region:30989-32122:1
so has part: feature:30989-32122:1:exon
subclass of: SO_0000010

position:30989:1
position: 30989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32122:1
position: 32122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30989-32122:1:exon

SCLO_RS24250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS24250
old locus tag: SCLO_6000290
inference: COORDINATES: protein motif:HMM:NF019268.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MKKGVSLALIGAGLGVLMAFPATAQEASAPQKVGPPAPAAADESPPNAGSAVASNPAGALARAVLGDGLESHKIMLLGWGEASAVTSTNDSKDVSPAAFFNTERGLNLNQLGVMLCSGRACPPFSFGPGAGVHNRVGPFPGPTPEHVTVDFNVTAIYGQDVQFLKLSGLDGDFHFDRNKDLKLGVTQAYADIYLPFLKGTSVMIGSFQTPLENAFNPPNWFATHTYGFQHGPAKHVGALAQTRVASGPAGHFSVDYGVVLGWNDWDNRNKNLDFIGGLRWRSADMRTWVDLEAIYGNGENDFGPAPGRGGSPYFALSSTGKYLGRLSSFLTVSHSLSPKFQVAMEASYGQQEAGDIAFVPWAITQGTVVRRQPGRAL
SIO_010081: SCLO_RS24250
subclass of: SO_0000673
so part of: SCLO_RS24250
location: 30989..32122
location: region:30989-32122:1
so has part: feature:30989-32122:1:exon

WP_162849118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30989-32122:1:exon

SCLO_RS24255
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS24255
old locus tag: SCLO_6000300
so part of: sequence
location: 32031..32375
location: region:32031-32375:1
so has part: feature:32031-32375:1:exon
subclass of: SO_0000010

position:32031:1
position: 32031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32375:1
position: 32375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32031-32375:1:exon

SCLO_RS24255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS24255
old locus tag: SCLO_6000300
inference: COORDINATES: protein motif:HMM:NF019268.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane beta-barrel protein
translation: MVSRRPVTSHSCLGRSPKARWYGANLGARYSLSDKVSVNGRAEWFTDEQGAHALWAGVRGDVYAATGNVEYQLTPAIRLRAEARYDIHDGPGRLFDNYSKDQQLTGLLNAFFLF
SIO_010081: SCLO_RS24255
subclass of: SO_0000673
so part of: SCLO_RS24255
location: 32031..32375
location: region:32031-32375:1
so has part: feature:32031-32375:1:exon

WP_083949188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32031-32375:1:exon

SCLO_RS22405
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22405
old locus tag: SCLO_6000310
so part of: sequence
location: 32422..33885
location: region:32422-33885:1
so has part: feature:32422-33885:1:exon
subclass of: SO_0000010

position:32422:1
position: 32422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33885:1
position: 33885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32422-33885:1:exon

SCLO_RS22405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22405
old locus tag: SCLO_6000310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014900394.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aldehyde dehydrogenase family protein
translation: MQTKLLIGGEWVDGSAGTTIPVENPYDGSIIAHIAEATAEDVDRAVAAAEAALPAWRALPAHERGRLLLKLADRIEEETADLARLEATDTGHPIRDCLSLDVPRTALCFRYFGGMADKLEGSVVPVDAGFLNYVEREPIGVVGAIVPWNFPLMFTSWKMGPALAAGNTMVIKPSEITPLSTLRIGELMMEVGIPAGVINIVTGYGHTAGQRIAEHPRIGKVAFTGSTATGRRIVEASVSNLKKIQLELGGKGPNIIFADANIPAAIGGSAFAIFHNQGQACIAGSRMIVHESIADEVIERFTALAKSIRIGDPLDPETEMGPLTSRLHQQRVLSFVEVAKEEGGAVLAGGKVPEGEAYAKGCFVEPTIVRAKATDRVAQEEVFGPFVTILTFKDDEEALAIANGTDYGLGAGLWTNDLTRAHLFAKKLHAGMVWINCYKRVHPASPFGGVGMSGYGREMGFEAMREYTQPKSVWVNVDANLPPFYKR
SIO_010081: SCLO_RS22405
subclass of: SO_0000673
so part of: SCLO_RS22405
location: 32422..33885
location: region:32422-33885:1
so has part: feature:32422-33885:1:exon

WP_066521111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32422-33885:1:exon

SCLO_RS22410
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22410
old locus tag: SCLO_6000320
so part of: sequence
location: 33891..34949
location: region:33891-34949:1
so has part: feature:33891-34949:1:exon
subclass of: SO_0000010

position:33891:1
position: 33891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34949:1
position: 34949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33891-34949:1:exon

SCLO_RS22410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22410
old locus tag: SCLO_6000320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008996018.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: maleylacetate reductase
translation: MQDFIYCGQTAHVFFGQGSISRLEEAIATVGGTRALLLSTPNQAEQAQALTRGVESIIGVFDGATMHTPVEVTDTALKHIEASEADCLVAFGGGSTIGLAKAIALRTDLPQVAVPTTYAGSEMTPILGQTENGRKTTLKSPKVLPELVIYDVDLTLGLPVGMSGTSGINAIAHAVEGLYAKDTNPVMRMLAAAGIEALAEALPTIARKADDVDARSQALYGAWLCGTVLGSVGMALHHKLCHTLGGTFDLPHAETHTVVLPHALAYNAPAIPDSIDVLRKALKNDDPAQALFVLGRAVNAPASLRELGMPEDGIDKAADQAVENAYWNPRSLERDDLRNLIARAWAGERPAS
SIO_010081: SCLO_RS22410
subclass of: SO_0000673
so part of: SCLO_RS22410
location: 33891..34949
location: region:33891-34949:1
so has part: feature:33891-34949:1:exon

WP_066521105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33891-34949:1:exon

SCLO_RS22415
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22415
old locus tag: SCLO_6000330
so part of: sequence
location: 34946..35773
location: region:34946-35773:1
so has part: feature:34946-35773:1:exon
subclass of: SO_0000010

position:34946:1
position: 34946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35773:1
position: 35773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34946-35773:1:exon

SCLO_RS22415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22415
old locus tag: SCLO_6000330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006752307.1
GO function: GO:0018576 - catechol 1,2-dioxygenase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
GO process: GO:0009712 - catechol-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dioxygenase
translation: MKGAIFPELTEAVIDAMAAAPNPRLREIMTVLVRHLHAAVRETRLTEEEWLAAVEFLTATGQICSGSRQEFILLSDTLGVSMLVDAINHNDGDVVTPSTVFGPFYSGIQRELATGASILLRPEDGDATLVSGSIADQDGNPIEGALIEVWQTAPCGLYDVQDQGQPEGHLRASFRSTPDGSYSFQTVLPVSYPIPADGPVGRMLGALGRHPNRPAHIHFMISAPGYRRLVTHIFVAGDDYLKSDAVFGVKPDLVVHPRPDGDRLAIDYDFRLAGA
SIO_010081: SCLO_RS22415
subclass of: SO_0000673
so part of: SCLO_RS22415
location: 34946..35773
location: region:34946-35773:1
so has part: feature:34946-35773:1:exon

WP_066521113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34946-35773:1:exon

SCLO_RS22420
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22420
old locus tag: SCLO_6000340
so part of: sequence
location: 35780..36175
location: region:35780-36175:1
so has part: feature:35780-36175:1:exon
subclass of: SO_0000010

position:35780:1
position: 35780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36175:1
position: 36175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35780-36175:1:exon

SCLO_RS22420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22420
old locus tag: SCLO_6000340
inference: COORDINATES: protein motif:HMM:NF012575.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rieske (2Fe-2S) protein
translation: MEAETIRDYWRLRPHAPAIGTELCPAVEIEEGRAREFHFGRGRNMFRMFVIRHEGVLRGYLNLCPHFSLPLNHELDQFMVDGVIVCVQHFARFRPDDGTCIDGACDDSRLDAVPVYEDVDRLVRVGEAKPA
SIO_010081: SCLO_RS22420
subclass of: SO_0000673
so part of: SCLO_RS22420
location: 35780..36175
location: region:35780-36175:1
so has part: feature:35780-36175:1:exon

WP_066521108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35780-36175:1:exon

SCLO_RS22425
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22425
old locus tag: SCLO_6000350
so part of: sequence
location: 36385..36804
location: region:36385-36804:1
so has part: feature:36385-36804:1:exon
subclass of: SO_0000010

position:36385:1
position: 36385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36804:1
position: 36804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36385-36804:1:exon

SCLO_RS22425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22425
old locus tag: SCLO_6000350
inference: COORDINATES: protein motif:HMM:NF013677.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTVEQEIDGSGGVENGRRRRWTLEEKRAVVELSLDPACSMAEVAACFDVLPAQIYAWRRELREMAEDAAREDRAMFLPAVIEPTSVPAVLLEPEAANARLLPDAVVQVAMEVRGVPVMVAHGASSTLVASVIAALLRAR
SIO_010081: SCLO_RS22425
subclass of: SO_0000673
so part of: SCLO_RS22425
location: 36385..36804
location: region:36385-36804:1
so has part: feature:36385-36804:1:exon

WP_082734689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36385-36804:1:exon

SCLO_RS22430
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
gene: tnpB
locus tag: SCLO_RS22430
old locus tag: SCLO_6000360
so part of: sequence
location: 36801..37172
location: region:36801-37172:1
so has part: feature:36801-37172:1:exon
subclass of: SO_0000010

position:36801:1
position: 36801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37172:1
position: 37172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36801-37172:1:exon

SCLO_RS22430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
gene: tnpB
locus tag: SCLO_RS22430
old locus tag: SCLO_6000360
inference: COORDINATES: protein motif:HMM:NF017528.2
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MIGPGSDAKVLIYTKPIDFRCGIDTLVAKVQHELSQDPWRGVAYIFRSKRKDRLKILWFDGTGIWLMTKRAEAAEGFAWPPAVDGSFSITAAQMAALTSGMDWRRHRAPRRVNPPKIEGFADA
SIO_010081: SCLO_RS22430
subclass of: SO_0000673
so part of: SCLO_RS22430
location: 36801..37172
location: region:36801-37172:1
so has part: feature:36801-37172:1:exon

WP_062346440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36801-37172:1:exon

SCLO_RS22435
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22435
old locus tag: SCLO_6000370
so part of: sequence
location: 37467..38960
location: region:37467-38960:1
so has part: feature:37467-38960:1:exon
subclass of: SO_0000010

position:37467:1
position: 37467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38960:1
position: 38960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37467-38960:1:exon

SCLO_RS22435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22435
old locus tag: SCLO_6000370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612218.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MEDALAAARDEVKRLNDILDQFKRHRFGQSAERLDPDQYQLVLEELEAALSRAEAGLEALIDQADATGETKRRRRNNRGALPAHLERIEQVVDIEDKQCACCGNDLHVIGEDVTERLDVVPTIFRVLVTRRPRYGCRGCDEGGVTQAPAPSFIVDQGLPTDALVAQVIVARYADHLPLYRQAQIYARQGIDLDRATLADWVGRVGWWLTPLRQHLLAELRSSVKLFADETRMPVLAPGTGKTKSGQLWAYARDDRPWGGLAPPAVVYMYAAGRGGMHPIDHLGDFAGVLQVDGYAGYNEIKRRNGVTLAFCLLHARRKFYDFREKEPVADEVLRRFSAIYKIEATLRDTSPEARFEGRQLILKPLFDNLRDYLSKNLGRFSAKGKMAEAINYMLNHWQQLTYCLLDGRVELDTNTVERSIRPIALSRRNSLFAGSDAGADNWAVLASLLETCKLSDVDPLAWLTATLTKLANGHSNKDLDSLMPWHFPKIAGRNAPS
SIO_010081: SCLO_RS22435
subclass of: SO_0000673
so part of: SCLO_RS22435
location: 37467..38960
location: region:37467-38960:1
so has part: feature:37467-38960:1:exon

WP_066522435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37467-38960:1:exon

SCLO_RS22440
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22440
old locus tag: SCLO_6000380
so part of: sequence
location: complement(39487..40068)
location: region:39487-40068:-1
so has part: feature:39487-40068:-1:exon
subclass of: SO_0000010

position:39487:-1
position: 39487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40068:-1
position: 40068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39487-40068:-1:exon

SCLO_RS22440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22440
old locus tag: SCLO_6000380
inference: COORDINATES: protein motif:HMM:NF016176.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YceI family protein
translation: MRAIFLYPIAATALAASLLNAPAVAAPAPTWTVNKAQSRLGFQASMNGQAISGAFRRFDARIAFDPANLSGSSVVAVIDTGSAATGDATRDESLPTPDWFNTKVFPRATFTSKSFKSLGGNRYQAAGTLNIRGVNRPVVLPFQLNINRGEARMQGSLVIDRRWFGVGRGQFASTDAVAANVRVNVTIQAARAK
SIO_010081: SCLO_RS22440
subclass of: SO_0000673
so part of: SCLO_RS22440
location: complement(39487..40068)
location: region:39487-40068:-1
so has part: feature:39487-40068:-1:exon

WP_066522462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39487-40068:-1:exon

SCLO_RS22445
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22445
old locus tag: SCLO_6000390
so part of: sequence
location: complement(40073..40663)
location: region:40073-40663:-1
so has part: feature:40073-40663:-1:exon
subclass of: SO_0000010

position:40073:-1
position: 40073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40663:-1
position: 40663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40073-40663:-1:exon

SCLO_RS22445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22445
old locus tag: SCLO_6000390
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012321321.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome b
translation: MRQRTRYSAVAMLLHWSIAALIIANLFLGWRMGFLKGLAQFDMFQLHKSVGITVLVLSIVRLVWRMLNPVPPLPAGMKGWEVAAAHVTHWAFYGLMIGLPLTGWAVVSVSPWNIPTLLWHTIPWPHIGLLHDLPINAKQAVEKVGGSIHMYFAFGGTALIVMHIGAALKHQFISRDGVLGRMVPGLRSTPHTSSEA
SIO_010081: SCLO_RS22445
subclass of: SO_0000673
so part of: SCLO_RS22445
location: complement(40073..40663)
location: region:40073-40663:-1
so has part: feature:40073-40663:-1:exon

WP_066522461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40073-40663:-1:exon

SCLO_RS22450
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22450
old locus tag: SCLO_6000400
so part of: sequence
location: complement(40767..41378)
location: region:40767-41378:-1
so has part: feature:40767-41378:-1:exon
subclass of: SO_0000010

position:40767:-1
position: 40767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41378:-1
position: 41378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40767-41378:-1:exon

SCLO_RS22450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22450
old locus tag: SCLO_6000400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008833472.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YceI family protein
translation: MNRVLTIAASVAAFAISLPAVGQANQDATAVQAGDYTVESTHTQVQFSVNHFGINDFYGTFPGASGSLSINPKNLAAARLDVTVPVSSVSTTNKTLDEELVSADWFDAAKFPTMHFVSTKVVKTGPKTATISGNLTLHGVTKPVTLNASFNAAAVNPLSKAYTLGFKASGRIKRTDFGVSKYAPLVSDETTITITSAFEKKAN
SIO_010081: SCLO_RS22450
subclass of: SO_0000673
so part of: SCLO_RS22450
location: complement(40767..41378)
location: region:40767-41378:-1
so has part: feature:40767-41378:-1:exon

WP_096362282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40767-41378:-1:exon

SCLO_RS22455
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
gene: wrbA
locus tag: SCLO_RS22455
old locus tag: SCLO_6000410
so part of: sequence
location: complement(41436..42035)
location: region:41436-42035:-1
so has part: feature:41436-42035:-1:exon
subclass of: SO_0000010

position:41436:-1
position: 41436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42035:-1
position: 42035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41436-42035:-1:exon

SCLO_RS22455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
gene: wrbA
locus tag: SCLO_RS22455
old locus tag: SCLO_6000410
EC number: 1.6.5.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006162678.1
GO function: GO:0010181 - FMN binding [Evidence IEA]; GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD(P)H:quinone oxidoreductase
translation: MAKVLVLYYSTYGHIETMAQAVAEGARSAGAEVDIKRVPETVPDGVARDNHFKLDQTAPIASVADLENYDAIIIGTGTRFGRLSSQMAAFLDQAGGLWARGALNGKVGAAFTSTATQHGGQETTLFSLITNLLHFGMVVVGLPYSHQGQMSLDEIVGGAPYGATTIAGGDGSRQPSKIELDGARHQGEIVAKTAAKLFA
SIO_010081: SCLO_RS22455
subclass of: SO_0000673
so part of: SCLO_RS22455
location: complement(41436..42035)
location: region:41436-42035:-1
so has part: feature:41436-42035:-1:exon

WP_066522345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41436-42035:-1:exon

SCLO_RS22460
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22460
old locus tag: SCLO_6000420
so part of: sequence
location: 42338..43237
location: region:42338-43237:1
so has part: feature:42338-43237:1:exon
subclass of: SO_0000010

position:42338:1
position: 42338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43237:1
position: 43237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42338-43237:1:exon

SCLO_RS22460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22460
old locus tag: SCLO_6000420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010339591.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pirin family protein
translation: MSTLTHPSEGVDTVVVPNSRDLGDGFFVRRALPSPQRQMVGPFIFFDEMGPVAFRGGQGLDVRPHPHIGLSTLTYLLEGEIVHRDSLGIHQTIRPGEINWMTAGRGIVHSERTDLDTRKSDSVLSGLQVWIALPTADEETAPSFDHFKAQEIPIEDEGGVRFTLIAGQSEGLQSPVKTFSDLVYAEIQLQHGARYKANDEHIERAFYVVSGAIEVVGQTGSFGAGQLVVLKPHAEVIIRASGQTGVMLIGGEPFPEERHVYWNLVSSRPDRIEQAKEDWRHDRFARVPDETDFIPLPSV
SIO_010081: SCLO_RS22460
subclass of: SO_0000673
so part of: SCLO_RS22460
location: 42338..43237
location: region:42338-43237:1
so has part: feature:42338-43237:1:exon

WP_066522347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42338-43237:1:exon

SCLO_RS22465
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22465
old locus tag: SCLO_6000430
so part of: sequence
location: complement(43302..43604)
location: region:43302-43604:-1
so has part: feature:43302-43604:-1:exon
subclass of: SO_0000010

position:43302:-1
position: 43302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43604:-1
position: 43604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43302-43604:-1:exon

SCLO_RS22465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22465
old locus tag: SCLO_6000430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012076428.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YciI family protein
translation: MGTFVFEALDRPGMEARRLQARDLHRAYIRNTPTGMRCVLGGPLRERADGPMHGTLLVFEADNADDVRTFMANDPYQLADLFEMVTVWEWSLGLGHIVVG
SIO_010081: SCLO_RS22465
subclass of: SO_0000673
so part of: SCLO_RS22465
location: complement(43302..43604)
location: region:43302-43604:-1
so has part: feature:43302-43604:-1:exon

WP_066522351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43302-43604:-1:exon

SCLO_RS23125
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS23125
old locus tag: SCLO_6000440
so part of: sequence
location: 43773..44072
location: region:43773-44072:1
so has part: feature:43773-44072:1:exon
subclass of: SO_0000010

position:43773:1
position: 43773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44072:1
position: 44072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43773-44072:1:exon

SCLO_RS23125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS23125
old locus tag: SCLO_6000440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVELHLLGSRSMHTRVLTKAGQYWARAETLLRKHPVRLPVNAELGTDCGHRRVHAMGLKHDNRHCLEYDLVRRFDNDRFISSGSMVSLFRKSIGCETAD
SIO_010081: SCLO_RS23125
subclass of: SO_0000673
so part of: SCLO_RS23125
location: 43773..44072
location: region:43773-44072:1
so has part: feature:43773-44072:1:exon

WP_123905560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43773-44072:1:exon

SCLO_RS22470
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22470
old locus tag: SCLO_6000450
so part of: sequence
location: complement(44227..44859)
location: region:44227-44859:-1
so has part: feature:44227-44859:-1:exon
subclass of: SO_0000010

position:44227:-1
position: 44227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44859:-1
position: 44859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44227-44859:-1:exon

SCLO_RS22470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22470
old locus tag: SCLO_6000450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013831444.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MEMPETELTAAKRPVWNAGRTVGAKRALKPKQIWEIRFYLNQRRRLRDRALFDLAIDSKLRGCDLVQMKIGDIVSGGQIRTRAIVMQQKTGRPVQFELLPDARASLLAWLDRRGGTVDDYVFPSRVDHNGHLSTRQYARLVDEWVTGVGLMRNEYGTHSLRRTKASIIYRATGNLRAVQILLGHSKIENTVRYLGIDVEDALALAENTEI
SIO_010081: SCLO_RS22470
subclass of: SO_0000673
so part of: SCLO_RS22470
location: complement(44227..44859)
location: region:44227-44859:-1
so has part: feature:44227-44859:-1:exon

WP_066522348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44227-44859:-1:exon

SCLO_RS23545
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS23545
so part of: sequence
location: complement(45382..45630)
location: region:45382-45630:-1
so has part: feature:45382-45630:-1:exon
subclass of: SO_0000010

position:45382:-1
position: 45382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45630:-1
position: 45630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45382-45630:-1:exon

SCLO_RS23545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS23545
inference: COORDINATES: protein motif:HMM:NF012801.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MSYAWRGGFLLSPSSAQAMGTRSLAYGTLDGSASLKITDNASLTLEGVNLLNAAQLTQFTSGLPSAYVDAGRRILFGARFSF
SIO_010081: SCLO_RS23545
subclass of: SO_0000673
so part of: SCLO_RS23545
location: complement(45382..45630)
location: region:45382-45630:-1
so has part: feature:45382-45630:-1:exon

WP_231923485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45382-45630:-1:exon

SCLO_RS22480
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22480
old locus tag: SCLO_6000460
so part of: sequence
location: complement(45737..46501)
location: region:45737-46501:-1
so has part: feature:45737-46501:-1:exon
subclass of: SO_0000010

position:45737:-1
position: 45737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46501:-1
position: 46501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45737-46501:-1:exon

SCLO_RS22480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22480
old locus tag: SCLO_6000460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS6-like element IS6100 family transposase
translation: MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHFAAAA
SIO_010081: SCLO_RS22480
subclass of: SO_0000673
so part of: SCLO_RS22480
location: complement(45737..46501)
location: region:45737-46501:-1
so has part: feature:45737-46501:-1:exon

WP_001389365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45737-46501:-1:exon

SCLO_RS22485
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22485
old locus tag: SCLO_6000470
so part of: sequence
location: 46478..47011
location: region:46478-47011:1
so has part: feature:46478-47011:1:exon
subclass of: SO_0000010

position:46478:1
position: 46478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47011:1
position: 47011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46478-47011:1:exon

SCLO_RS22485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22485
old locus tag: SCLO_6000470
inference: COORDINATES: protein motif:HMM:NF019604.2
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FAD-dependent oxidoreductase
translation: MAPLEIRHRSVRPISAKHAQASRFLQQSRLDHSRLGQVIVNPNLATPNDPDIFALGDCASVMLPDRESPLPTTAQAAYQQSVYLGRTLPTILEGKPVPPFRYHDFGSLVSLGGYDAYGTLGRFGLFRGGFLHGRMAQLGHALLYRRHQARIYGPVRGSLLWLADTLDTSVRRRERLA
SIO_010081: SCLO_RS22485
subclass of: SO_0000673
so part of: SCLO_RS22485
location: 46478..47011
location: region:46478-47011:1
so has part: feature:46478-47011:1:exon

WP_231923483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46478-47011:1:exon

SCLO_RS24150
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS24150
old locus tag: SCLO_6000480
so part of: sequence
location: 47013..48221
location: region:47013-48221:1
so has part: feature:47013-48221:1:exon
subclass of: SO_0000010

position:47013:1
position: 47013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48221:1
position: 48221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47013-48221:1:exon

SCLO_RS24150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS24150
old locus tag: SCLO_6000480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018075411.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0004620 - phospholipase activity [Evidence IEA]
GO process: GO:0006629 - lipid metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipase A
translation: MGRLHQRSCLILGAFWLVLPGTVWASPPDMEVLLTGQVETDASGEQVVALRFLNRTDRQEILALPDRIEAKVRQENRERTLLLARANDTEPHLAIDAHGFGQAHYRLPANEPLVRAMVSIPAWSTQEVVLAPIVKTATHEAENRSNPNAPILPPPPTDRKAGNAFVDNLDLYEPIYAVYGPGTDSEARIQLSFKYRLFGASANSQTSSNWRDGLYLAYTQRMFWDLESKSSPFRNIDFQPELIYITPTVGLTGDIAMTVQAGIRHESNGRDGPQSRSINSIYIAPMATLPIAGDYRLTFAPRLSLYVGNKSDNPDIVHYRGHAGLFMEVGEDNGLRLSTSTRFNFGSGKGAVNADLSYPLPRLLGGGPDLYLFAQSFYGYGENLLDYNRRTRRLRIGVALVR
SIO_010081: SCLO_RS24150
subclass of: SO_0000673
so part of: SCLO_RS24150
location: 47013..48221
location: region:47013-48221:1
so has part: feature:47013-48221:1:exon

WP_231923484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47013-48221:1:exon

SCLO_RS22500
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22500
old locus tag: SCLO_6000490
so part of: sequence
location: complement(48269..49006)
location: region:48269-49006:-1
so has part: feature:48269-49006:-1:exon
subclass of: SO_0000010

position:48269:-1
position: 48269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49006:-1
position: 49006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48269-49006:-1:exon

SCLO_RS22500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22500
old locus tag: SCLO_6000490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6118 family protein
translation: MMDEDEYREPDAGDDPALAFARVEDRLASVHGEVGLLRAAIAGLAATRESIEIPDYEPTLARTEKVLGVLVQQIDPIAKSPLLSMTPHNMAGEIVSAALHARREDQRLIAEARTGLDQAAREVGNRLASARRGDVQNRWLIGTGLGGAALGMLLYAALAGPVARMMPASWHWPERRAMHALGEPTMWDAGQRLMQTAAPESWALIVAASPLVDGNREAVQKCREQADKAKKPVRCTIEVRPDGGR
SIO_010081: SCLO_RS22500
subclass of: SO_0000673
so part of: SCLO_RS22500
location: complement(48269..49006)
location: region:48269-49006:-1
so has part: feature:48269-49006:-1:exon

WP_007686165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48269-49006:-1:exon

SCLO_RS22505
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
gene: traA
locus tag: SCLO_RS22505
old locus tag: SCLO_6000500
so part of: sequence
location: complement(49014..52145)
location: region:49014-52145:-1
so has part: feature:49014-52145:-1:exon
subclass of: SO_0000010

position:49014:-1
position: 49014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52145:-1
position: 52145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49014-52145:-1:exon

SCLO_RS22505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
gene: traA
locus tag: SCLO_RS22505
old locus tag: SCLO_6000500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015449240.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MAIYHFSAKVISRANGSSAVASAAYRAAERLHDDRLGRDHDFSNKAGVVHSEIMLPEGTPERLNDRATLWNEVEAGEKRKDAQLAREVEFSIPRELDQKEGIRLARDFVEKQFVERGMVADMNVHWDLGKDGQSKPHAHVMLSMREVGLEGFGQKVREWNSTALLQEWREAWADHVNERLAELDIDARIDHRSYEAQGIELEPQHKIGPAASRMPEQGLEAERVEDHARIARENGEKIIANPQIALDAITRQQATFTRRDLAQFAFRHSDGKDQFDQVMSAVRTSPELVALGKDGRGEDRFTSREMIDTEQRLERAGYGLADRAGHGLPAASKMGGRDTAERVGLALGSQQKDALAHITGKNDLAIVVGYAGTGKSTMLGVARDEWERAGYQVRGAALSGIAAEGLEGGSGIASRTIASMEYQWEQGRELLGPRDVLVIDEAGMIGTRQMERVLSEAERAGAKVILVGDAEQLQAIEAGAAFRSLAERYGAAEISDVRRQHEDWQKDATRALATGRTGEAIHAYAEHGMVHAAETREAARESLVEGWDRARIADPDKTRIILTHTNAEVRDLNLAARDRLRDAGELGQDVRVSAERGAREFATGDRIMFLKNDRGLGVKNGTLGKVERVSPDSMAVKLDDGRQVAFDLKDYAHVDHGYAATIHKSQGVTVDRAHVLATPGMDRHSAYVALSRHRDGVQLHYGRDDFADDRRLVRTLSRERAKDMASDYPMYRDRDAEAQSFADRRGLSGEIRVADAPERKGVEILAPRAGTSRQMGEDSRTPDIGGDRGAGEAKAAAERQSRRGMFDGLKLSAAPVKAAEPAQGAKEKPAPKRGMFDGLKLPQRTPTPEPAKELPARAEQGQDRDFRRAVERASRSAEAVLQARASGGPVLEHQKVALERAVQALDTLRPRASDDMAEAMKRDSGLLREAAAGRSGPMIEAIRQEARVRADPNLRADRFVERWQQLSQDRDRLYRAGDMAGRKTLGQEMAGMAKSLERDPQVESILRGRTRELGLEIGMSPGRELGRELSRGLGISHDRGLSR
SIO_010081: SCLO_RS22505
subclass of: SO_0000673
so part of: SCLO_RS22505
location: complement(49014..52145)
location: region:49014-52145:-1
so has part: feature:49014-52145:-1:exon

WP_007686163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49014-52145:-1:exon

SCLO_RS22510
type: Gene
subclass of: SO_0000704
RO_0002162: 120107
locus tag: SCLO_RS22510
old locus tag: SCLO_6000510
so part of: sequence
location: 52320..52625
location: region:52320-52625:1
so has part: feature:52320-52625:1:exon
subclass of: SO_0000010

position:52320:1
position: 52320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52625:1
position: 52625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52320-52625:1:exon

SCLO_RS22510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 120107
locus tag: SCLO_RS22510
old locus tag: SCLO_6000510
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007686162.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MRKVRDYDAELKALGDKARALKAKKVQQLGELVTSTGADALDLDVLAGVLLAAVESASADEKEAWRAKGSAFFQGRGRKAGRSTGGNAGGGSKTGAGETQG
SIO_010081: SCLO_RS22510
subclass of: SO_0000673
so part of: SCLO_RS22510
location: 52320..52625
location: region:52320-52625:1
so has part: feature:52320-52625:1:exon

WP_007686162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52320-52625:1:exon