Corvus moneduloides isolate bCorMon1 chromosome 31, bCorMon1.pri, whole genome shotgun sequence.
type: Entry
definition: Corvus moneduloides isolate bCorMon1 chromosome 31, bCorMon1.pri, whole genome shotgun sequence.
sequence version: NC_045506.1
sequence date: 2020-01-23
sequence: sequence
division: CON
label: NC_045506.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA599199
dblink: SAMN12368441
keyword: WGS
keyword: RefSeq
source: Corvus moneduloides (New Caledonian crow)
organism: Corvus moneduloides
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM018837.1.\nAssembly name: bCorMon1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/11/14. The original whole-genome shotgun project has the\naccession WHPO00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n + Arrow v. 6.0.0.47841; purge_dups v.\n github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Bionano solve v. 3.2.1_04122018; Salsa\n HiC v. 2.2; Arrow polishing + gap filling\n v. SMRTlink_6.0.0.47841; longranger\n alignment v. 2.2.2; freebayes polishing\n v. 1.3.1; gEVAL manual curation v. 26 SEP\n 2019; VGP assembly pipeline v. 1.6\nAssembly Name :: bCorMon1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.08x\nSequencing Technology :: PacBio Sequel I; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus moneduloides Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1421766
topology: linear
so has quality: SO_0000987
location: 1..1421766
location: region:1-1421766:1
RO_0002162: 1196302

NC_045506
type: RefSeq
SIO_000068: refseq

PRJNA599199
type: BioProject
SIO_000068: bioproject

SAMN12368441
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421766:1
position: 1421766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1421766:1:source
so part of: sequence
organism: Corvus moneduloides
mol type: genomic DNA
isolate: bCorMon1
chromosome: 31
sex: female
tissue type: blood
country: New Caledonia: near Bourail
lat lon: 21.599296 S 165.398128 E
collection date: 17-Oct-2018
collected by: Matthew Steele

1196302
type: Taxonomy
SIO_000068: taxonomy

LOC116436928
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(502..337605)
location: region:502-337605:-1
so has part: feature:502-337605:-1:exon
subclass of: SO_0000010

116436928
type: Gene
SIO_000068: ncbigene

position:502:-1
position: 502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337605:-1
position: 337605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502-337605:-1:exon

LOC116436928
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436928
product: zinc finger protein 436-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032094385.1
SIO_010081: LOC116436928
subclass of: SO_0000673
so part of: LOC116436928
location: complement(join(502..2023,328527..328628,337221..337605))
location: region:502-337605:-1
so has part: feature:337221-337605:-1:exon
so has part: feature:328527-328628:-1:exon
so has part: feature:502-2023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337221-337605:-1:exon

position:337221:-1
position: 337221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328527-328628:-1:exon

position:328527:-1
position: 328527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328628:-1
position: 328628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502-2023:-1:exon

position:2023:-1
position: 2023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436928
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like
translation: MSCTEQGVVHGKKMRVAAAPERRNSIGLTHGLPGNHENVSHSCPFHVWTDLSFPRCGRMEEEEKPRRCRTRRGCKRSPERSKEEGGRRSRQSSELGEKPQGGEKPHKCLECGMGFRWSSSLIRHQRTHTGERPYECGECGKGFSSISHLIQHQVVHTRERPYECLDCWKSFRHSSTLRKHQRTHTGERPYECSECGKRFPTSSQLLEHQRIHTDERPFRCPDCGKGFKRNSHLVSHRRIHTGERPYECPECGKSFSSSSHLTKHQQRHH
SIO_010081: LOC116436928
subclass of: SO_0000673
so part of: LOC116436928
location: complement(join(1463..2023,328527..328628,337221..337367))
location: region:1463-337367:-1
so has part: feature:337221-337367:-1:exon
so has part: feature:328527-328628:-1:exon
so has part: feature:1463-2023:-1:exon

XP_031950276.1
type: Protein
SIO_000068: ncbiprotein

position:1463:-1
position: 1463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337367:-1
position: 337367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337221-337367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328527-328628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1463-2023:-1:exon

LOC116436963
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9616..32096
location: region:9616-32096:1
so has part: feature:9616-32096:1:exon
subclass of: SO_0000010

116436963
type: Gene
SIO_000068: ncbigene

position:9616:1
position: 9616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32096:1
position: 32096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9616-32096:1:exon

LOC116436963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436963
product: zinc finger protein 845-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094409.1
SIO_010081: LOC116436963
subclass of: SO_0000673
so part of: LOC116436963
location: join(9616..9721,11280..11358,11797..12707,13559..13944,22074..23107,24429..24756,30296..32096)
location: region:9616-32096:1
so has part: feature:9616-9721:1:exon
so has part: feature:11280-11358:1:exon
so has part: feature:11797-12707:1:exon
so has part: feature:13559-13944:1:exon
so has part: feature:22074-23107:1:exon
so has part: feature:24429-24756:1:exon
so has part: feature:30296-32096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9616-9721:1:exon

position:9721:1
position: 9721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11280-11358:1:exon

position:11280:1
position: 11280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11358:1
position: 11358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11797-12707:1:exon

position:11797:1
position: 11797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12707:1
position: 12707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13559-13944:1:exon

position:13559:1
position: 13559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13944:1
position: 13944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22074-23107:1:exon

position:22074:1
position: 22074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23107:1
position: 23107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:24429-24756:1:exon

position:24429:1
position: 24429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24756:1
position: 24756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:30296-32096:1:exon

position:30296:1
position: 30296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436963
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:12530..12532,aa:OTHER)
transl except: (pos:31145..31147,aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 845-like
translation: MPQDFSFPSLGRMEEEEEAVRKMPREPQAGTELQMETREDKSLWQNLMEEAALSGSMAQESHGEEKPEGSPTRRGSKASPGCSEEKRPPLCFIQRPNLVVHEQLHTGEKPYKCLECGKSFSHTSHLFIHHQIHTGGWPYKCLECGKSFSHSSSLICHQRIHTGERPYKCLQCGKSFCQSSSLTCHQEMHARGGPFECPECGKMFQWISYLIVHQQTHTGERPFRCTDCGKSFKWSSQLTSHQRIHTRERPXECPECGKSFSWSSSLRKHQQRHQXGNPCECPECGKSFGHCSNSILKLEVLLTEKLFQNPVLQTLRNPLLLLNAVKYYRVLQPCSGDSVVAVSCPQPVAVPRAQAALGAEPRPEPAWRWRLIPQSTMASQGFSWLLQFCVLLMLAHPLDPSSHPEGDMGTSALLREELERQDSVGPGMTPLVDVVLVSWTRSALELLIMGLVLGWFWRRWGEGKESPRTPKWRDQRGGSAGRVFWAELWWFGVFMDTKALETPRDEPGQKEPPAQGAHPLFLPPNQDLSFPRCGQMEEEEKPRRCRTRRGCKRSPERSKEERAPLCREGGRRCRGSSELGEKPQGGEKPHKCLECGKGFRWNFRLREHQRIHTGEKPYKCGECRKSFSQSSHLVSHQRIHTGERPYECGECGVGFRDSSQLREHQRIHTGEKPYECGECGKGFRQRPHLMKHQVIHTLERPHECGECGKGFWWSSNLIQHQNIHTGERPYECSECGKRFQTSSTLLVHQRIHTEERPFRCPNCGKGFKQSSSLISHRRIHTGERPYECPECGKSFSQSSTLTQHQRRMAARAGPVPGLLLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGRSPVRRRRSSEAAPAQDLSFPRRGRMEEEEKPRRCRTRRGCKRSPERSKEERAPLCQEGSRRSRGSLEVGEKPQGGEKPHKCLECGKGFRWNSSLIRHQRIHTGERPYECGECGKGFSSISHLTRHQVVHTGERPYECLDCWKSFSQSCDLRVHQRTHTGERPYECGKCGKGFTSSSHLIRHQVVHTGERPYECLQCGKSFCQSSELRAHQRTHTGERPYECSECGKRFQRGSHLLLHERIHTDERPFRCPDCGKSFKCNSTLIRHQRIHTGERPYECPQCGKSFSQSSALTQHHRRHRXGKPCECPECGKSFVRCSSSIPRGRIGVG
SIO_010081: LOC116436963
subclass of: SO_0000673
so part of: LOC116436963
location: join(9713..9721,11280..11358,11797..12707,13559..13944,22074..23107,24429..24756,30296..31234)
location: region:9713-31234:1
so has part: feature:9713-9721:1:exon
so has part: feature:11280-11358:1:exon
so has part: feature:11797-12707:1:exon
so has part: feature:13559-13944:1:exon
so has part: feature:22074-23107:1:exon
so has part: feature:24429-24756:1:exon
so has part: feature:30296-31234:1:exon

XP_031950300.1
type: Protein
SIO_000068: ncbiprotein

position:9713:1
position: 9713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31234:1
position: 31234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9713-9721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11280-11358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11797-12707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13559-13944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22074-23107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24429-24756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30296-31234:1:exon

LOC116436911
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(47401..55650)
location: region:47401-55650:-1
so has part: feature:47401-55650:-1:exon

116436911
type: Gene
SIO_000068: ncbigene

position:47401:-1
position: 47401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55650:-1
position: 55650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47401-55650:-1:exon

LOC116436911
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436911
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116436911
subclass of: SO_0000673
so part of: LOC116436911
location: complement(47401..48995)
location: region:47401-48995:-1
so has part: feature:47401-48995:-1:exon

position:48995:-1
position: 48995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47401-48995:-1:exon

LOC116436911
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436911
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116436911
subclass of: SO_0000673
so part of: LOC116436911
location: complement(55113..55650)
location: region:55113-55650:-1
so has part: feature:55113-55650:-1:exon

position:55113:-1
position: 55113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55113-55650:-1:exon

LOC116436952
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 65367..68125
location: region:65367-68125:1
so has part: feature:65367-68125:1:exon
subclass of: SO_0000011

116436952
type: Gene
SIO_000068: ncbigene

position:65367:1
position: 65367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68125:1
position: 68125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65367-68125:1:exon

LOC116436952
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436952
product: uncharacterized LOC116436952
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 136 samples with support for all annotated introns
transcript id: XR_004237104.1
SIO_010081: LOC116436952
subclass of: SO_0000673
so part of: LOC116436952
location: join(65367..65446,65547..68125)
location: region:65367-68125:1
so has part: feature:65367-65446:1:exon
so has part: feature:65547-68125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65367-65446:1:exon

position:65446:1
position: 65446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65547-68125:1:exon

position:65547:1
position: 65547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436879
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 69998..94609
location: region:69998-94609:1
so has part: feature:69998-94609:1:exon
subclass of: SO_0000010

116436879
type: Gene
SIO_000068: ncbigene

position:69998:1
position: 69998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94609:1
position: 94609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69998-94609:1:exon

LOC116436879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436879
product: mutS protein homolog 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094299.1
SIO_010081: LOC116436879
subclass of: SO_0000673
so part of: LOC116436879
location: join(69998..70419,71174..71289,71919..72092,74273..74445,75222..75289,77511..77585,77982..78046,78607..78776,79606..79742,80150..80253,81088..81212,82310..82352,83653..83810,85000..85118,85641..85769,87241..87415,89034..89122,90347..90392,92770..92876,94375..94609)
location: region:69998-94609:1
so has part: feature:69998-70419:1:exon
so has part: feature:71174-71289:1:exon
so has part: feature:71919-72092:1:exon
so has part: feature:74273-74445:1:exon
so has part: feature:75222-75289:1:exon
so has part: feature:77511-77585:1:exon
so has part: feature:77982-78046:1:exon
so has part: feature:78607-78776:1:exon
so has part: feature:79606-79742:1:exon
so has part: feature:80150-80253:1:exon
so has part: feature:81088-81212:1:exon
so has part: feature:82310-82352:1:exon
so has part: feature:83653-83810:1:exon
so has part: feature:85000-85118:1:exon
so has part: feature:85641-85769:1:exon
so has part: feature:87241-87415:1:exon
so has part: feature:89034-89122:1:exon
so has part: feature:90347-90392:1:exon
so has part: feature:92770-92876:1:exon
so has part: feature:94375-94609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69998-70419:1:exon

position:70419:1
position: 70419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71174-71289:1:exon

position:71174:1
position: 71174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71289:1
position: 71289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71919-72092:1:exon

position:71919:1
position: 71919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72092:1
position: 72092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74273-74445:1:exon

position:74273:1
position: 74273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74445:1
position: 74445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:75222-75289:1:exon

position:75222:1
position: 75222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75289:1
position: 75289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:77511-77585:1:exon

position:77511:1
position: 77511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77585:1
position: 77585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:77982-78046:1:exon

position:77982:1
position: 77982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78046:1
position: 78046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:78607-78776:1:exon

position:78607:1
position: 78607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78776:1
position: 78776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:79606-79742:1:exon

position:79606:1
position: 79606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79742:1
position: 79742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:80150-80253:1:exon

position:80150:1
position: 80150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80253:1
position: 80253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:81088-81212:1:exon

position:81088:1
position: 81088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81212:1
position: 81212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:82310-82352:1:exon

position:82310:1
position: 82310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82352:1
position: 82352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:83653-83810:1:exon

position:83653:1
position: 83653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83810:1
position: 83810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:85000-85118:1:exon

position:85000:1
position: 85000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85118:1
position: 85118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:85641-85769:1:exon

position:85641:1
position: 85641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85769:1
position: 85769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:87241-87415:1:exon

position:87241:1
position: 87241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87415:1
position: 87415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:89034-89122:1:exon

position:89034:1
position: 89034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89122:1
position: 89122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:90347-90392:1:exon

position:90347:1
position: 90347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90392:1
position: 90392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:92770-92876:1:exon

position:92770:1
position: 92770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92876:1
position: 92876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:94375-94609:1:exon

position:94375:1
position: 94375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436879
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436879
product: mutS protein homolog 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032094300.1
SIO_010081: LOC116436879
subclass of: SO_0000673
so part of: LOC116436879
location: join(70000..70419,71174..71289,71919..72092,74273..74445,75222..75289,77511..77585,77982..78046,78607..78776,79606..79742,80150..80253,81088..81212,82310..82352,83653..83810,85000..85118,85641..85769,87241..87415,89034..89122,89452..89543)
location: region:70000-89543:1
so has part: feature:70000-70419:1:exon
so has part: feature:71174-71289:1:exon
so has part: feature:71919-72092:1:exon
so has part: feature:74273-74445:1:exon
so has part: feature:75222-75289:1:exon
so has part: feature:77511-77585:1:exon
so has part: feature:77982-78046:1:exon
so has part: feature:78607-78776:1:exon
so has part: feature:79606-79742:1:exon
so has part: feature:80150-80253:1:exon
so has part: feature:81088-81212:1:exon
so has part: feature:82310-82352:1:exon
so has part: feature:83653-83810:1:exon
so has part: feature:85000-85118:1:exon
so has part: feature:85641-85769:1:exon
so has part: feature:87241-87415:1:exon
so has part: feature:89034-89122:1:exon
so has part: feature:89452-89543:1:exon

position:70000:1
position: 70000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89543:1
position: 89543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70000-70419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71174-71289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71919-72092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74273-74445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75222-75289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77511-77585:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77982-78046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78607-78776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79606-79742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:80150-80253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81088-81212:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82310-82352:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83653-83810:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85000-85118:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:85641-85769:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:87241-87415:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:89034-89122:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:89452-89543:1:exon

position:89452:1
position: 89452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mutS protein homolog 4-like isoform X1
translation: MSNTACDAGNTTKLFSLITEHFKNVTFTTVQRKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKSLKVRFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLLGVLNYTKTPGGSRRLRSNILEPLVDAETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEPLKAALRSCSTQLLKAYYNSLEDTRFGIILEKITTVINDDTRYTKGCLSMRTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYSLPMKTSFSSARGFFIQMNADCSTLPNGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIACKLLNEIYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVHPEFTDTLAIKQGWHPILEKIAMEKPVSNNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIGMDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAGNKEKIAYTYTLSKGYTEEKNYGLKAAEVSSLPSSIILDAKEITNHIAKQILRRWEAPGFGALASDTGFSWSCPGIASQRGRIAPQEVLQPEVPLDPDYFLKKDLAKPEGLGR
SIO_010081: LOC116436879
subclass of: SO_0000673
so part of: LOC116436879
location: join(70351..70419,71174..71289,71919..72092,74273..74445,75222..75289,77511..77585,77982..78046,78607..78776,79606..79742,80150..80253,81088..81212,82310..82352,83653..83810,85000..85118,85641..85769,87241..87415,89034..89122,90347..90392,92770..92876,94375..94407)
location: region:70351-94407:1
so has part: feature:70351-70419:1:exon
so has part: feature:71174-71289:1:exon
so has part: feature:71919-72092:1:exon
so has part: feature:74273-74445:1:exon
so has part: feature:75222-75289:1:exon
so has part: feature:77511-77585:1:exon
so has part: feature:77982-78046:1:exon
so has part: feature:78607-78776:1:exon
so has part: feature:79606-79742:1:exon
so has part: feature:80150-80253:1:exon
so has part: feature:81088-81212:1:exon
so has part: feature:82310-82352:1:exon
so has part: feature:83653-83810:1:exon
so has part: feature:85000-85118:1:exon
so has part: feature:85641-85769:1:exon
so has part: feature:87241-87415:1:exon
so has part: feature:89034-89122:1:exon
so has part: feature:90347-90392:1:exon
so has part: feature:92770-92876:1:exon
so has part: feature:94375-94407:1:exon

XP_031950190.1
type: Protein
SIO_000068: ncbiprotein

position:70351:1
position: 70351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94407:1
position: 94407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70351-70419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71174-71289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71919-72092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74273-74445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75222-75289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77511-77585:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77982-78046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78607-78776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79606-79742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:80150-80253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81088-81212:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82310-82352:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83653-83810:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85000-85118:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:85641-85769:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:87241-87415:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:89034-89122:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90347-90392:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:92770-92876:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:94375-94407:1:exon

LOC116436879
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436879
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mutS protein homolog 4-like isoform X2
translation: MSNTACDAGNTTKLFSLITEHFKNVTFTTVQRKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKSLKVRFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLLGVLNYTKTPGGSRRLRSNILEPLVDAETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEPLKAALRSCSTQLLKAYYNSLEDTRFGIILEKITTVINDDTRYTKGCLSMRTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYSLPMKTSFSSARGFFIQMNADCSTLPNGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIACKLLNEIYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVHPEFTDTLAIKQGWHPILEKIAMEKPVSNNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIGMDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAGNKEKIAYTYTLSKGYTEEKNYGLKAAEVSSLPSSIILDAKEITNHIAKQILNSTGRKALLR
SIO_010081: LOC116436879
subclass of: SO_0000673
so part of: LOC116436879
location: join(70351..70419,71174..71289,71919..72092,74273..74445,75222..75289,77511..77585,77982..78046,78607..78776,79606..79742,80150..80253,81088..81212,82310..82352,83653..83810,85000..85118,85641..85769,87241..87415,89034..89122,89452..89484)
location: region:70351-89484:1
so has part: feature:70351-70419:1:exon
so has part: feature:71174-71289:1:exon
so has part: feature:71919-72092:1:exon
so has part: feature:74273-74445:1:exon
so has part: feature:75222-75289:1:exon
so has part: feature:77511-77585:1:exon
so has part: feature:77982-78046:1:exon
so has part: feature:78607-78776:1:exon
so has part: feature:79606-79742:1:exon
so has part: feature:80150-80253:1:exon
so has part: feature:81088-81212:1:exon
so has part: feature:82310-82352:1:exon
so has part: feature:83653-83810:1:exon
so has part: feature:85000-85118:1:exon
so has part: feature:85641-85769:1:exon
so has part: feature:87241-87415:1:exon
so has part: feature:89034-89122:1:exon
so has part: feature:89452-89484:1:exon

XP_031950191.1
type: Protein
SIO_000068: ncbiprotein

position:89484:1
position: 89484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70351-70419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71174-71289:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71919-72092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74273-74445:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75222-75289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77511-77585:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77982-78046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:78607-78776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79606-79742:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:80150-80253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81088-81212:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82310-82352:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:83653-83810:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85000-85118:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:85641-85769:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:87241-87415:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:89034-89122:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:89452-89484:1:exon

LOC116436927
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 106110..108666
location: region:106110-108666:1
so has part: feature:106110-108666:1:exon
subclass of: SO_0000010

116436927
type: Gene
SIO_000068: ncbigene

position:106110:1
position: 106110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108666:1
position: 108666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106110-108666:1:exon

LOC116436927
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436927
product: gastrula zinc finger protein XlCGF49.1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_032094384.1
SIO_010081: LOC116436927
subclass of: SO_0000673
so part of: LOC116436927
location: join(106110..106436,107365..107440,107905..108666)
location: region:106110-108666:1
so has part: feature:106110-106436:1:exon
so has part: feature:107365-107440:1:exon
so has part: feature:107905-108666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106110-106436:1:exon

position:106436:1
position: 106436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107365-107440:1:exon

position:107365:1
position: 107365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107440:1
position: 107440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107905-108666:1:exon

position:107905:1
position: 107905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436927
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436927
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: gastrula zinc finger protein XlCGF49.1-like
translation: MPQDFSFPSLGQMEEEEAVRKMPREPQAGTELQMETREDKSPWQNLLEEAALSSSMAQESHREEKPKGSPTRRGSKASPGCSEEKRPPFCFIQRPNLVVHEQLHTGEKPYKCLECGKSFSHTSHLFIHHQIHTGGWPYKCLECGKSFSHSSSLTCHYRIHTGERPYKCLQCGKSFCQSSSLTCHQEMHARGGPFECPECGKMFQWISYLIVHQQTHTGERPFRCTDCGKSFKWSSQLTSHQRIHTRERPXECPECGKSFSWSSSLRKHQQRHQ
SIO_010081: LOC116436927
subclass of: SO_0000673
so part of: LOC116436927
location: join(106428..106436,107365..107440,107905..108640)
location: region:106428-108640:1
so has part: feature:106428-106436:1:exon
so has part: feature:107365-107440:1:exon
so has part: feature:107905-108640:1:exon

XP_031950275.1
type: Protein
SIO_000068: ncbiprotein

position:106428:1
position: 106428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108640:1
position: 108640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106428-106436:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107365-107440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107905-108640:1:exon

LOC116436917
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(133447..135915)
location: region:133447-135915:-1
so has part: feature:133447-135915:-1:exon
subclass of: SO_0000010

116436917
type: Gene
SIO_000068: ncbigene

position:133447:-1
position: 133447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135915:-1
position: 135915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133447-135915:-1:exon

LOC116436917
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436917
product: zinc finger protein GLI4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_032094365.1
SIO_010081: LOC116436917
subclass of: SO_0000673
so part of: LOC116436917
location: complement(join(133447..134338,134766..134844,135773..135915))
location: region:133447-135915:-1
so has part: feature:135773-135915:-1:exon
so has part: feature:134766-134844:-1:exon
so has part: feature:133447-134338:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135773-135915:-1:exon

position:135773:-1
position: 135773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134766-134844:-1:exon

position:134766:-1
position: 134766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134844:-1
position: 134844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133447-134338:-1:exon

position:134338:-1
position: 134338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436917
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein GLI4-like
translation: MEEEEEAVRKMPREPQAGTELQMETREDKSPWQNLLEEAALSGSMAQESHGEEKPKGSPTRRGSKASPGCSEEKRPPFCFIQRSNLVVHEQLHTGEKPYKCLECGKSFRHTSHLFIHHQIHTGGWPYKCLECGKSFSHSSSLIRHYRIHTGERPYKCLQCGKSFCQSSSLTCHQEMHARGGPFECPECGKMFQWISYLIVHQQTHTGERPFRCTDCGKSFKWSSQLTSHQRIHTRERP
SIO_010081: LOC116436917
subclass of: SO_0000673
so part of: LOC116436917
location: complement(join(133674..134338,134766..134817))
location: region:133674-134817:-1
so has part: feature:134766-134817:-1:exon
so has part: feature:133674-134338:-1:exon

XP_031950256.1
type: Protein
SIO_000068: ncbiprotein

position:133674:-1
position: 133674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134817:-1
position: 134817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134766-134817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133674-134338:-1:exon

LOC116436938
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 137769..145287
location: region:137769-145287:1
so has part: feature:137769-145287:1:exon
subclass of: SO_0000010

116436938
type: Gene
SIO_000068: ncbigene

position:137769:1
position: 137769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145287:1
position: 145287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137769-145287:1:exon

LOC116436938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436938
product: zinc finger protein 79-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032094395.1
SIO_010081: LOC116436938
subclass of: SO_0000673
so part of: LOC116436938
location: join(137769..138462,144097..144429,144514..145287)
location: region:137769-145287:1
so has part: feature:137769-138462:1:exon
so has part: feature:144097-144429:1:exon
so has part: feature:144514-145287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137769-138462:1:exon

position:138462:1
position: 138462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144097-144429:1:exon

position:144097:1
position: 144097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144429:1
position: 144429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144514-145287:1:exon

position:144514:1
position: 144514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436938
product: zinc finger protein 79-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032094396.1
SIO_010081: LOC116436938
subclass of: SO_0000673
so part of: LOC116436938
location: join(139621..139861,144097..144429,144514..145287)
location: region:139621-145287:1
so has part: feature:139621-139861:1:exon
so has part: feature:144097-144429:1:exon
so has part: feature:144514-145287:1:exon

position:139621:1
position: 139621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139621-139861:1:exon

position:139861:1
position: 139861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144097-144429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144514-145287:1:exon

LOC116436938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 79-like
translation: MEEEEKPRRCRTRRGCKRSPERSKEERAPLCREGGRRSRGSSELGEKPQGGEKPHKCLECGMGFRWSSSLIRHQRIHTGERPYECGKCGKSFRQSSNLIQHQRTHTGERPYECSECGKRFQRSSQLLVHQRIHTDERPFRCPDCGKGFKYNSTLIKHQRIHTGERPYECPECGKSFSSSSTLTQHHRRHR
SIO_010081: LOC116436938
subclass of: SO_0000673
so part of: LOC116436938
location: join(144124..144429,144514..144780)
location: region:144124-144780:1
so has part: feature:144124-144429:1:exon
so has part: feature:144514-144780:1:exon

XP_031950286.1
type: Protein
SIO_000068: ncbiprotein

position:144124:1
position: 144124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144780:1
position: 144780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144124-144429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144514-144780:1:exon

LOC116436938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 79-like
translation: MEEEEKPRRCRTRRGCKRSPERSKEERAPLCREGGRRSRGSSELGEKPQGGEKPHKCLECGMGFRWSSSLIRHQRIHTGERPYECGKCGKSFRQSSNLIQHQRTHTGERPYECSECGKRFQRSSQLLVHQRIHTDERPFRCPDCGKGFKYNSTLIKHQRIHTGERPYECPECGKSFSSSSTLTQHHRRHR
SIO_010081: LOC116436938
subclass of: SO_0000673
so part of: LOC116436938
location: join(144124..144429,144514..144780)
location: region:144124-144780:1
so has part: feature:144124-144429:1:exon
so has part: feature:144514-144780:1:exon

XP_031950287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144124-144429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144514-144780:1:exon

LOC116436951
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 157103..157484
location: region:157103-157484:1
so has part: feature:157103-157484:1:exon
subclass of: SO_0000011

116436951
type: Gene
SIO_000068: ncbigene

position:157103:1
position: 157103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157484:1
position: 157484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157103-157484:1:exon

LOC116436951
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436951
product: uncharacterized LOC116436951
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XR_004237103.1
SIO_010081: LOC116436951
subclass of: SO_0000673
so part of: LOC116436951
location: join(157103..157213,157314..157484)
location: region:157103-157484:1
so has part: feature:157103-157213:1:exon
so has part: feature:157314-157484:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157103-157213:1:exon

position:157213:1
position: 157213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157314-157484:1:exon

position:157314:1
position: 157314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436906
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(158323..166818)
location: region:158323-166818:-1
so has part: feature:158323-166818:-1:exon
subclass of: SO_0000010

116436906
type: Gene
SIO_000068: ncbigene

position:158323:-1
position: 158323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166818:-1
position: 166818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158323-166818:-1:exon

LOC116436906
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436906
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 133 samples with support for all annotated introns
transcript id: XM_032094355.1
SIO_010081: LOC116436906
subclass of: SO_0000673
so part of: LOC116436906
location: complement(join(158323..159688,166332..166818))
location: region:158323-166818:-1
so has part: feature:166332-166818:-1:exon
so has part: feature:158323-159688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166332-166818:-1:exon

position:166332:-1
position: 166332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158323-159688:-1:exon

position:159688:-1
position: 159688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436906
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MAARAGPVPGLLLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGGRSPVRRRRSSEAAPAQDLSFPRRGRMEEEEKPRRCRTRRGCKRSPERSKEERAPLCREGGRRSRGSLELGEKPQGGEKPHKCLECGKGFSYNSHLRVHQRIHTGERPYECGECGKSFRQSSHLMEHQRMHTGERPYGCGKCGKGFTSSCELIRHQVVHTGERPYGCLQCGKSFGWSSTLRAHQCTHTGERPYECSECGKRFQRSSHLLRHQRIHTDERPFRCPECGKGFKYNAHLIRHRRIHTGERPYECPQCGKSFSRSSHLTRHQGRHH
SIO_010081: LOC116436906
subclass of: SO_0000673
so part of: LOC116436906
location: complement(join(158921..159688,166332..166661))
location: region:158921-166661:-1
so has part: feature:166332-166661:-1:exon
so has part: feature:158921-159688:-1:exon

XP_031950246.1
type: Protein
SIO_000068: ncbiprotein

position:158921:-1
position: 158921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166661:-1
position: 166661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166332-166661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158921-159688:-1:exon

LOC116436864
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(171623..183159)
location: region:171623-183159:-1
so has part: feature:171623-183159:-1:exon
subclass of: SO_0000010

116436864
type: Gene
SIO_000068: ncbigene

position:171623:-1
position: 171623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183159:-1
position: 183159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171623-183159:-1:exon

LOC116436864
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436864
product: serine/threonine-protein kinase pim-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094282.1
SIO_010081: LOC116436864
subclass of: SO_0000673
so part of: LOC116436864
location: complement(join(171623..172093,172381..173237,173463..173612,173861..174037,174653..175019,175225..175275,175393..176011,183038..183159))
location: region:171623-183159:-1
so has part: feature:183038-183159:-1:exon
so has part: feature:175393-176011:-1:exon
so has part: feature:175225-175275:-1:exon
so has part: feature:174653-175019:-1:exon
so has part: feature:173861-174037:-1:exon
so has part: feature:173463-173612:-1:exon
so has part: feature:172381-173237:-1:exon
so has part: feature:171623-172093:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183038-183159:-1:exon

position:183038:-1
position: 183038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175393-176011:-1:exon

position:175393:-1
position: 175393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176011:-1
position: 176011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175225-175275:-1:exon

position:175225:-1
position: 175225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175275:-1
position: 175275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:174653-175019:-1:exon

position:174653:-1
position: 174653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175019:-1
position: 175019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173861-174037:-1:exon

position:173861:-1
position: 173861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174037:-1
position: 174037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173463-173612:-1:exon

position:173463:-1
position: 173463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173612:-1
position: 173612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:172381-173237:-1:exon

position:172381:-1
position: 172381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173237:-1
position: 173237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:171623-172093:-1:exon

position:172093:-1
position: 172093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436864
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase pim-1-like
translation: MGGVSPPVQPPGQPAQWGVGERRLCRCRLRCCHRLRSSPHSVSHPLPLSLSFPNPPSRGLPLPTPGRAMPPARPRPRAGLPPPRPRASRRGPASARLSPSWLWRCWAGISAWLLGTIASPWLRLARPRPRPRPRLLPGPAGDTGGAAAPAASAASSPLRAPPLLSAAAGPEPPVSASKEPTCGDGRPGAVERRSGAVPGPGPSADGRVSPARKAQQGLKERYRLGSLLGRGGFGSVLAATRLSDGAPVAIKRVPRNRIHHWGRLPDGTRAPLEIVLLHKVSAGFPGIVQLHEWLELPNNVVMVLERPERSQDLLHFIRARGFLCEEVARHLFRQVLEAVRHCTSCGVLHRDIKPENILVDLATGQAKLTDFGCGTYLQAAAYTSFAGTPSYRPPEWIQFGWYYGKAATVWSLGIVLHQMVCGEHPFRRGWNSTWGRLSLPRRLSPECQDLIRRCLSVLSSERPSLEDLSCDPWMQDIHVP
SIO_010081: LOC116436864
subclass of: SO_0000673
so part of: LOC116436864
location: complement(join(173506..173612,173861..174037,174653..175019,175225..175275,175393..176011,183038..183159))
location: region:173506-183159:-1
so has part: feature:183038-183159:-1:exon
so has part: feature:175393-176011:-1:exon
so has part: feature:175225-175275:-1:exon
so has part: feature:174653-175019:-1:exon
so has part: feature:173861-174037:-1:exon
so has part: feature:173506-173612:-1:exon

XP_031950173.1
type: Protein
SIO_000068: ncbiprotein

position:173506:-1
position: 173506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183038-183159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175393-176011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:175225-175275:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174653-175019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173861-174037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173506-173612:-1:exon

LOC116436945
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436945
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(197695..227016)
location: region:197695-227016:-1
so has part: feature:197695-227016:-1:exon

116436945
type: Gene
SIO_000068: ncbigene

position:197695:-1
position: 197695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227016:-1
position: 227016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197695-227016:-1:exon

LOC116436945
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436945
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436945
subclass of: SO_0000673
so part of: LOC116436945
location: complement(197695..199106)
location: region:197695-199106:-1
so has part: feature:197695-199106:-1:exon

position:199106:-1
position: 199106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197695-199106:-1:exon

LOC116436945
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436945
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436945
subclass of: SO_0000673
so part of: LOC116436945
location: complement(216336..217265)
location: region:216336-217265:-1
so has part: feature:216336-217265:-1:exon

position:216336:-1
position: 216336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217265:-1
position: 217265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216336-217265:-1:exon

LOC116436945
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436945
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436945
subclass of: SO_0000673
so part of: LOC116436945
location: complement(225682..227016)
location: region:225682-227016:-1
so has part: feature:225682-227016:-1:exon

position:225682:-1
position: 225682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225682-227016:-1:exon

LOC116436925
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 232663..237472
location: region:232663-237472:1
so has part: feature:232663-237472:1:exon
subclass of: SO_0000010

116436925
type: Gene
SIO_000068: ncbigene

position:232663:1
position: 232663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237472:1
position: 237472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232663-237472:1:exon

LOC116436925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436925
product: serine/threonine-protein kinase PAK 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032094382.1
SIO_010081: LOC116436925
subclass of: SO_0000673
so part of: LOC116436925
location: join(232663..233489,233672..233781,234547..234664,235037..235136,235556..235752,236654..237472)
location: region:232663-237472:1
so has part: feature:232663-233489:1:exon
so has part: feature:233672-233781:1:exon
so has part: feature:234547-234664:1:exon
so has part: feature:235037-235136:1:exon
so has part: feature:235556-235752:1:exon
so has part: feature:236654-237472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:232663-233489:1:exon

position:233489:1
position: 233489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:233672-233781:1:exon

position:233672:1
position: 233672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233781:1
position: 233781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234547-234664:1:exon

position:234547:1
position: 234547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234664:1
position: 234664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235037-235136:1:exon

position:235037:1
position: 235037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235136:1
position: 235136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235556-235752:1:exon

position:235556:1
position: 235556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235752:1
position: 235752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:236654-237472:1:exon

position:236654:1
position: 236654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436925
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436925
product: serine/threonine-protein kinase PAK 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032094380.1
SIO_010081: LOC116436925
subclass of: SO_0000673
so part of: LOC116436925
location: join(232663..233489,233672..233781,234547..234664,235037..235136,236654..237472)
location: region:232663-237472:1
so has part: feature:232663-233489:1:exon
so has part: feature:233672-233781:1:exon
so has part: feature:234547-234664:1:exon
so has part: feature:235037-235136:1:exon
so has part: feature:236654-237472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:232663-233489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233672-233781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234547-234664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235037-235136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236654-237472:1:exon

LOC116436925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SMU1-like isoform X1
translation: MCLNDNESGGKLRLFEKTAGAENVVRALRLRAEGPFLQSFQGQMSLALCPVAIKKMSLRGQNGERAVNEILVLKDKKNPNIVSSLDSFLVDEDLWLVMEYMDGGTLQDVVRQTRMAEGEMAAVSRECLQGLDFLHSNRVIHRDLKSSNILLATDGSVKLGSLSDPAERDPAAAGAQAPVGSAAGLPGVQPGAGRGAALVCPGAAAGGFEAAAGETAARGRGFLVGPPPIVSSLAAFHMLRQQNPRLVWLGRVLCRSSGPGAPQGAGTSSSRSGGSEPCLT
SIO_010081: LOC116436925
subclass of: SO_0000673
so part of: LOC116436925
location: join(233340..233489,233672..233781,234547..234664,235037..235136,236654..237018)
location: region:233340-237018:1
so has part: feature:233340-233489:1:exon
so has part: feature:233672-233781:1:exon
so has part: feature:234547-234664:1:exon
so has part: feature:235037-235136:1:exon
so has part: feature:236654-237018:1:exon

XP_031950271.1
type: Protein
SIO_000068: ncbiprotein

position:233340:1
position: 233340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237018:1
position: 237018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233340-233489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233672-233781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234547-234664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235037-235136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236654-237018:1:exon

LOC116436925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 3-like isoform X2
translation: MCLNDNESGGKLRLFEKTAGAENVVRALRLRAEGPFLQSFQGQMSLALCPVAIKKMSLRGQNGERAVNEILVLKDKKNPNIVSSLDSFLVDEDLWLVMEYMDGGTLQDVVRQTRMAEGEMAAVSRECLQGLDFLHSNRVIHRDLKSSNILLATDGSVKLADFGLCAQLSPEQEQRSSMVGTAHWMAPEVVTSSPYGPKVDIWSLGIVTIKLVEGEPP
SIO_010081: LOC116436925
subclass of: SO_0000673
so part of: LOC116436925
location: join(233340..233489,233672..233781,234547..234664,235037..235136,235556..235731)
location: region:233340-235731:1
so has part: feature:233340-233489:1:exon
so has part: feature:233672-233781:1:exon
so has part: feature:234547-234664:1:exon
so has part: feature:235037-235136:1:exon
so has part: feature:235556-235731:1:exon

XP_031950273.1
type: Protein
SIO_000068: ncbiprotein

position:235731:1
position: 235731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233340-233489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233672-233781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234547-234664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235037-235136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235556-235731:1:exon

LOC116436865
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 240880..256943
location: region:240880-256943:1
so has part: feature:240880-256943:1:exon
subclass of: SO_0000010

116436865
type: Gene
SIO_000068: ncbigene

position:240880:1
position: 240880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256943:1
position: 256943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240880-256943:1:exon

LOC116436865
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436865
product: serine/threonine-protein kinase pim-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094283.1
SIO_010081: LOC116436865
subclass of: SO_0000673
so part of: LOC116436865
location: join(240880..240919,254851..255113,255231..255281,255487..255853,256522..256943)
location: region:240880-256943:1
so has part: feature:240880-240919:1:exon
so has part: feature:254851-255113:1:exon
so has part: feature:255231-255281:1:exon
so has part: feature:255487-255853:1:exon
so has part: feature:256522-256943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240880-240919:1:exon

position:240919:1
position: 240919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254851-255113:1:exon

position:254851:1
position: 254851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255113:1
position: 255113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:255231-255281:1:exon

position:255231:1
position: 255231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255281:1
position: 255281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255487-255853:1:exon

position:255487:1
position: 255487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255853:1
position: 255853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:256522-256943:1:exon

position:256522:1
position: 256522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase pim-1-like
translation: MGSCRSCTRNKKGAPPLLSAAAGPEPPVSASKEPTCGDGRPGAVERRSGAVPGPGPSADGRVSPARKAQQGLKERYRLGSLLGRGGFGSVLAATRLSDGAPVAIKRVPRNRIHHWGQLPDGTRAPLEIVLLHKVSAGFPGIVQLHEWLELPNNVVMVLERPERSQDLLHFIRARGFLCEEVARHLFRQVLEAVRHCTSCGVLHRDIKPENILLDLATGQAKLIDFGCGTYLQAAAYTSFAGTPSYRPPEWIQFGWYYGKAATVWSLGIVLHQMVCGEHPFRRGWNSTWGRLSHDGSLQVDPRLCSTGGIAVLGDSSGLRSIPHWQLLRRWQCPALLQKKELMAKFRHSPEHTQHGLAMASSSCTCALARSSKERQSFCPA
SIO_010081: LOC116436865
subclass of: SO_0000673
so part of: LOC116436865
location: join(240880..240919,254851..255113,255231..255281,255487..255853,256522..256943)
location: region:240880-256943:1
so has part: feature:240880-240919:1:exon
so has part: feature:254851-255113:1:exon
so has part: feature:255231-255281:1:exon
so has part: feature:255487-255853:1:exon
so has part: feature:256522-256943:1:exon

XP_031950174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:240880-240919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254851-255113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255231-255281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255487-255853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256522-256943:1:exon

LOC116436954
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436954
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 257834..258725
location: region:257834-258725:1
so has part: feature:257834-258725:1:exon
subclass of: SO_0000011

116436954
type: Gene
SIO_000068: ncbigene

position:257834:1
position: 257834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258725:1
position: 258725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257834-258725:1:exon

LOC116436954
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436954
product: uncharacterized LOC116436954
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XR_004237123.1
SIO_010081: LOC116436954
subclass of: SO_0000673
so part of: LOC116436954
location: join(257834..257967,258255..258725)
location: region:257834-258725:1
so has part: feature:257834-257967:1:exon
so has part: feature:258255-258725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257834-257967:1:exon

position:257967:1
position: 257967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:258255-258725:1:exon

position:258255:1
position: 258255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436936
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436936
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(268054..273541)
location: region:268054-273541:-1
so has part: feature:268054-273541:-1:exon
subclass of: SO_0000010

116436936
type: Gene
SIO_000068: ncbigene

position:268054:-1
position: 268054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273541:-1
position: 273541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268054-273541:-1:exon

LOC116436936
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436936
product: uncharacterized LOC116436936
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032094393.1
SIO_010081: LOC116436936
subclass of: SO_0000673
so part of: LOC116436936
location: complement(join(268054..269407,272618..273541))
location: region:268054-273541:-1
so has part: feature:272618-273541:-1:exon
so has part: feature:268054-269407:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272618-273541:-1:exon

position:272618:-1
position: 272618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268054-269407:-1:exon

position:269407:-1
position: 269407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436936
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436936
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436936
translation: MAARAGPVPGLLLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGRSPVRRRRSSEAAPAQVSDSEWIERPLRPSGAASSRSRGALNVLKGSGAVGPWCAGSSESPDNPCPSGVDLLVLRVLLSVLAVSLWPAAGALIPWQGLFGWALPCRGGQCLCQVLVAAAVPWVLGPPWALRFIPGGL
SIO_010081: LOC116436936
subclass of: SO_0000673
so part of: LOC116436936
location: complement(join(269042..269407,272618..272944))
location: region:269042-272944:-1
so has part: feature:272618-272944:-1:exon
so has part: feature:269042-269407:-1:exon

XP_031950284.1
type: Protein
SIO_000068: ncbiprotein

position:269042:-1
position: 269042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272944:-1
position: 272944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272618-272944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269042-269407:-1:exon

LOC116436913
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(274497..338599)
location: region:274497-338599:-1
so has part: feature:274497-338599:-1:exon
subclass of: SO_0000010

116436913
type: Gene
SIO_000068: ncbigene

position:274497:-1
position: 274497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338599:-1
position: 338599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274497-338599:-1:exon

LOC116436913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436913
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032094361.1
SIO_010081: LOC116436913
subclass of: SO_0000673
so part of: LOC116436913
location: complement(join(274497..275530,275615..275883,338285..338599))
location: region:274497-338599:-1
so has part: feature:338285-338599:-1:exon
so has part: feature:275615-275883:-1:exon
so has part: feature:274497-275530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338285-338599:-1:exon

position:338285:-1
position: 338285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275615-275883:-1:exon

position:275615:-1
position: 275615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275883:-1
position: 275883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274497-275530:-1:exon

position:275530:-1
position: 275530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MEEEEKPWRCRMRRGCKRSPERSKEERAPLCREGSRRSRGSSELGEKPQGGEKPHKCLECGKGFSYKSRLREHQRIHTGERPYECSEYGKRFPSSSDLLKHQRNHTDERPFRCPDCGKGFKQNSNLVTHRCIHTRERPYECPECGKGFSYNSCLIRHQRIHTGEWCYKCFECGKRFQTSSDLLVHQRIHTEERPFCCCNCGKGFNQNFQLLRHWCIHTRERPYECPECGKGFSYNSDLIRHQRIHTGERCYKCEECGKRFQRSSDLLRHQWIHTDERPFRCPDCRKGFKCNAHLIIHQRIHTRERPYECPQCGKSFSSSSALTKHQQRHR
SIO_010081: LOC116436913
subclass of: SO_0000673
so part of: LOC116436913
location: complement(join(274780..275530,275615..275856))
location: region:274780-275856:-1
so has part: feature:275615-275856:-1:exon
so has part: feature:274780-275530:-1:exon

XP_031950252.1
type: Protein
SIO_000068: ncbiprotein

position:274780:-1
position: 274780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275856:-1
position: 275856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275615-275856:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274780-275530:-1:exon

LOC116436883
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(284970..298853)
location: region:284970-298853:-1
so has part: feature:284970-298853:-1:exon
subclass of: SO_0000010

116436883
type: Gene
SIO_000068: ncbigene

position:284970:-1
position: 284970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298853:-1
position: 298853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284970-298853:-1:exon

LOC116436883
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436883
product: serine/threonine-protein kinase PAK 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032094308.1
SIO_010081: LOC116436883
subclass of: SO_0000673
so part of: LOC116436883
location: complement(join(284970..285789,293642..293741,294137..294254,295020..295129,297032..297856,298260..298297,298759..298853))
location: region:284970-298853:-1
so has part: feature:298759-298853:-1:exon
so has part: feature:298260-298297:-1:exon
so has part: feature:297032-297856:-1:exon
so has part: feature:295020-295129:-1:exon
so has part: feature:294137-294254:-1:exon
so has part: feature:293642-293741:-1:exon
so has part: feature:284970-285789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298759-298853:-1:exon

position:298759:-1
position: 298759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298260-298297:-1:exon

position:298260:-1
position: 298260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298297:-1
position: 298297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297032-297856:-1:exon

position:297032:-1
position: 297032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297856:-1
position: 297856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:295020-295129:-1:exon

position:295020:-1
position: 295020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295129:-1
position: 295129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:294137-294254:-1:exon

position:294137:-1
position: 294137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294254:-1
position: 294254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:293642-293741:-1:exon

position:293642:-1
position: 293642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293741:-1
position: 293741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:284970-285789:-1:exon

position:285789:-1
position: 285789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436883
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436883
product: serine/threonine-protein kinase PAK 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032094309.1
SIO_010081: LOC116436883
subclass of: SO_0000673
so part of: LOC116436883
location: complement(join(284970..285789,293026..293222,293642..293741,294137..294254,295020..295129,297032..297856,298260..298297,298759..298853))
location: region:284970-298853:-1
so has part: feature:298759-298853:-1:exon
so has part: feature:298260-298297:-1:exon
so has part: feature:297032-297856:-1:exon
so has part: feature:295020-295129:-1:exon
so has part: feature:294137-294254:-1:exon
so has part: feature:293642-293741:-1:exon
so has part: feature:293026-293222:-1:exon
so has part: feature:284970-285789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298759-298853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298260-298297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297032-297856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295020-295129:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:294137-294254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293642-293741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293026-293222:-1:exon

position:293026:-1
position: 293026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293222:-1
position: 293222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:284970-285789:-1:exon

LOC116436883
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436883
product: serine/threonine-protein kinase PAK 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032094310.1
SIO_010081: LOC116436883
subclass of: SO_0000673
so part of: LOC116436883
location: complement(join(284970..285789,293026..293222,293642..293741,294137..294254,295020..295129,296153..296201,297032..297451))
location: region:284970-297451:-1
so has part: feature:297032-297451:-1:exon
so has part: feature:296153-296201:-1:exon
so has part: feature:295020-295129:-1:exon
so has part: feature:294137-294254:-1:exon
so has part: feature:293642-293741:-1:exon
so has part: feature:293026-293222:-1:exon
so has part: feature:284970-285789:-1:exon

position:297451:-1
position: 297451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297032-297451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296153-296201:-1:exon

position:296153:-1
position: 296153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296201:-1
position: 296201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295020-295129:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294137-294254:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293642-293741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293026-293222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284970-285789:-1:exon

LOC116436883
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436883 isoform X1
translation: MIQQAVAAVCTLYSVAYSGYFLAHLARHLTRGSRAAPPSGTKAASAPPLAPSASKEEAKEEEDSSELPGVLGDDGELPSVPGDEGKHPKVWEYNSEAPVVWGEDGGHHPVLDEDSEAPAAWDKEDGHLPVWDEDRGHPVAWEEEAAILPAWEEDGKHPVACKEDQEPAEFWEEDGEPPSAWEEDTEAPSAAGSWAEHSDSSTALQPEGREEWCLMQLSTSALLLCARAGCCVCVSASAAPRLALQLNVTESFIVLAQLRPRGSRPQGVGLHFGPAARRALHLGGSVFHVVSFREHRERGGACREIPGTGAGWPRVAIKKMSLRGQNGERAVNEILVLKDKKNPNIVSSLDSFLVDEDLWLVMEYMDGGTLQDVVRQTRMAEGEMAAVSRECLQGLDFLHSNRVIHRDLKSSNILLATDGSVKLGSLSDPAERDPAAAGAQAPVGSAAGLPGVQPGAGRGAALVCPGAAAGGCEAAAGETAARGRGFLVGPPSNSLRSRCFSHAKAAESSPGLAWQGPLQVIWTRCPARSRDIFKQIRWLRALPDLSLDVSREEAAPTSLGTLCQCFPTLLIKKFGLRSNLSLLPSLEFQTIPLCPVATEPVRNLPWESNSSFLSFSSFGQHPFLSSAKPLSNLSPLIAAAKQLREQRRT
SIO_010081: LOC116436883
subclass of: SO_0000673
so part of: LOC116436883
location: complement(join(285110..285789,293642..293741,294137..294254,295020..295129,297032..297856,298260..298297,298759..298837))
location: region:285110-298837:-1
so has part: feature:298759-298837:-1:exon
so has part: feature:298260-298297:-1:exon
so has part: feature:297032-297856:-1:exon
so has part: feature:295020-295129:-1:exon
so has part: feature:294137-294254:-1:exon
so has part: feature:293642-293741:-1:exon
so has part: feature:285110-285789:-1:exon

XP_031950199.1
type: Protein
SIO_000068: ncbiprotein

position:285110:-1
position: 285110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298837:-1
position: 298837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298759-298837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298260-298297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297032-297856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295020-295129:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:294137-294254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293642-293741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285110-285789:-1:exon

LOC116436883
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable serine/threonine-protein kinase PIX7 isoform X2
translation: MIQQAVAAVCTLYSVAYSGYFLAHLARHLTRGSRAAPPSGTKAASAPPLAPSASKEEAKEEEDSSELPGVLGDDGELPSVPGDEGKHPKVWEYNSEAPVVWGEDGGHHPVLDEDSEAPAAWDKEDGHLPVWDEDRGHPVAWEEEAAILPAWEEDGKHPVACKEDQEPAEFWEEDGEPPSAWEEDTEAPSAAGSWAEHSDSSTALQPEGREEWCLMQLSTSALLLCARAGCCVCVSASAAPRLALQLNVTESFIVLAQLRPRGSRPQGVGLHFGPAARRALHLGGSVFHVVSFREHRERGGACREIPGTGAGWPRVAIKKMSLRGQNGERAVNEILVLKDKKNPNIVSSLDSFLVDEDLWLVMEYMDGGTLQDVVRQTRMAEGEMAAVSRECLQGLDFLHSNRVIHRDLKSSNILLATDGSVKLADFGLCAQLSPEQEQRSSMVGTAHWMAPEVVTSSPYGPKVDIWSLGIVTIEMVEGEPPYFEHTGAMARCLIRQNGTPQLQEPRRLSALLRDFLECSLEPDEERRWSAQELLQVDAKRLQGKQQREGGVFSWGPPPIVSGLAAFHMLRQQNPRLVWLGRVLCRSSGPGAPQGAGTSSSRSGGSEPCLT
SIO_010081: LOC116436883
subclass of: SO_0000673
so part of: LOC116436883
location: complement(join(285424..285789,293026..293222,293642..293741,294137..294254,295020..295129,297032..297856,298260..298297,298759..298837))
location: region:285424-298837:-1
so has part: feature:298759-298837:-1:exon
so has part: feature:298260-298297:-1:exon
so has part: feature:297032-297856:-1:exon
so has part: feature:295020-295129:-1:exon
so has part: feature:294137-294254:-1:exon
so has part: feature:293642-293741:-1:exon
so has part: feature:293026-293222:-1:exon
so has part: feature:285424-285789:-1:exon

XP_031950200.1
type: Protein
SIO_000068: ncbiprotein

position:285424:-1
position: 285424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298759-298837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298260-298297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297032-297856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295020-295129:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:294137-294254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293642-293741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293026-293222:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285424-285789:-1:exon

LOC116436883
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PAK 1-like isoform X3
translation: MWFLSGSTVSVGEPAEKYLELEQVGQGAFGTVSKGLDRATGGEVAIKKMSLRGQNGERAVNEILVLKDKKNPNIVSSLDSFLVDEDLWLVMEYMDGGTLQDVVRQTRMAEGEMAAVSRECLQGLDFLHSNRVIHRDLKSSNILLATDGSVKLADFGLCAQLSPEQEQRSSMVGTAHWMAPEVVTSSPYGPKVDIWSLGIVTIEMVEGEPPYFEHTGAMARCLIRQNGTPQLQEPRRLSALLRDFLECSLEPDEERRWSAQELLQVDAKRLQGKQQREGGVFSWGPPPIVSGLAAFHMLRQQNPRLVWLGRVLCRSSGPGAPQGAGTSSSRSGGSEPCLT
SIO_010081: LOC116436883
subclass of: SO_0000673
so part of: LOC116436883
location: complement(join(285424..285789,293026..293222,293642..293741,294137..294254,295020..295129,296153..296201,297032..297111))
location: region:285424-297111:-1
so has part: feature:297032-297111:-1:exon
so has part: feature:296153-296201:-1:exon
so has part: feature:295020-295129:-1:exon
so has part: feature:294137-294254:-1:exon
so has part: feature:293642-293741:-1:exon
so has part: feature:293026-293222:-1:exon
so has part: feature:285424-285789:-1:exon

XP_031950201.1
type: Protein
SIO_000068: ncbiprotein

position:297111:-1
position: 297111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297032-297111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296153-296201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295020-295129:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294137-294254:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293642-293741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293026-293222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285424-285789:-1:exon

LOC116436907
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300483..315784
location: region:300483-315784:1
so has part: feature:300483-315784:1:exon
subclass of: SO_0000010

116436907
type: Gene
SIO_000068: ncbigene

position:300483:1
position: 300483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315784:1
position: 315784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300483-315784:1:exon

LOC116436907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436907
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_032094356.1
SIO_010081: LOC116436907
subclass of: SO_0000673
so part of: LOC116436907
location: join(300483..300863,314386..315784)
location: region:300483-315784:1
so has part: feature:300483-300863:1:exon
so has part: feature:314386-315784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300483-300863:1:exon

position:300863:1
position: 300863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314386-315784:1:exon

position:314386:1
position: 314386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MAARAGPVPGLLLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGRSPVRRRRSSEAAPAQDLSFPRCGQMEEEEKPRRCCTRRGCKCSPERSKEERAPLIQEGSRRSRGSLEVGEKPQGREKPHKCLECGKGFRWSSILMRHQRIHTGERPYECGECGKSFSQSSHLIQHQRIHTGERPYECGKCGKGFTSSSQLIQHQVVHTGDRPYECLECGKSFGWSSDLRAHQRTHTGERPYECSECGKRFSSSSDLLVHQRIHTDERPFRCPDCGMGFKRNAHLIRHRRIHTGERPYECPQCGKSFSQSNNLTKHQRRHR
SIO_010081: LOC116436907
subclass of: SO_0000673
so part of: LOC116436907
location: join(300537..300863,314386..315153)
location: region:300537-315153:1
so has part: feature:300537-300863:1:exon
so has part: feature:314386-315153:1:exon

XP_031950247.1
type: Protein
SIO_000068: ncbiprotein

position:300537:1
position: 300537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315153:1
position: 315153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300537-300863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314386-315153:1:exon

LOC116436956
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(304358..306719)
location: region:304358-306719:-1
so has part: feature:304358-306719:-1:exon
subclass of: SO_0000011

116436956
type: Gene
SIO_000068: ncbigene

position:304358:-1
position: 304358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306719:-1
position: 306719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304358-306719:-1:exon

LOC116436956
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436956
product: uncharacterized LOC116436956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_004237125.1
SIO_010081: LOC116436956
subclass of: SO_0000673
so part of: LOC116436956
location: complement(join(304358..304529,304601..306719))
location: region:304358-306719:-1
so has part: feature:304601-306719:-1:exon
so has part: feature:304358-304529:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304601-306719:-1:exon

position:304601:-1
position: 304601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:304358-304529:-1:exon

position:304529:-1
position: 304529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436950
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 343700..344078
location: region:343700-344078:1
so has part: feature:343700-344078:1:exon
subclass of: SO_0000011

116436950
type: Gene
SIO_000068: ncbigene

position:343700:1
position: 343700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344078:1
position: 344078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343700-344078:1:exon

LOC116436950
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436950
product: uncharacterized LOC116436950
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XR_004237102.1
SIO_010081: LOC116436950
subclass of: SO_0000673
so part of: LOC116436950
location: join(343700..343805,343906..344078)
location: region:343700-344078:1
so has part: feature:343700-343805:1:exon
so has part: feature:343906-344078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343700-343805:1:exon

position:343805:1
position: 343805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343906-344078:1:exon

position:343906:1
position: 343906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436868
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 345658..349064
location: region:345658-349064:1
so has part: feature:345658-349064:1:exon
subclass of: SO_0000010

116436868
type: Gene
SIO_000068: ncbigene

position:345658:1
position: 345658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349064:1
position: 349064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345658-349064:1:exon

LOC116436868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436868
product: zinc finger and SCAN domain-containing protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094286.1
SIO_010081: LOC116436868
subclass of: SO_0000673
so part of: LOC116436868
location: join(345658..345774,347092..347541,348093..349064)
location: region:345658-349064:1
so has part: feature:345658-345774:1:exon
so has part: feature:347092-347541:1:exon
so has part: feature:348093-349064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345658-345774:1:exon

position:345774:1
position: 345774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347092-347541:1:exon

position:347092:1
position: 347092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347541:1
position: 347541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348093-349064:1:exon

position:348093:1
position: 348093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436868
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:348489..348491,aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger and SCAN domain-containing protein 2-like
translation: MEEEEKPRRCRTRRGCKHSPERSKEERAPLCREGRRRSRGSLEVGEKPQGGEKPHKCLECGKGFSYKSQLRAHQRIHTGEKPYECGKCGKSFRQRPHCRESFTKDVWTSGGSPESCLLHRQSYSISGSGYPEPALQLPSTALTKLSSSPTPHLMKHQVIHTLERPHECGECGKSFWQSSNLIQHQMIHTGERPYECSECGNRFHTSSNLLVHQRIHTDERPFRCPDCGRGFKHNSILVTHQRIHTGERPYECPQCGKSFSSSSALTQHHRKHRXGKPCECPECGKSFVCCASSIPRGRISVG
SIO_010081: LOC116436868
subclass of: SO_0000673
so part of: LOC116436868
location: join(347119..347541,348093..348578)
location: region:347119-348578:1
so has part: feature:347119-347541:1:exon
so has part: feature:348093-348578:1:exon

XP_031950177.1
type: Protein
SIO_000068: ncbiprotein

position:347119:1
position: 347119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348578:1
position: 348578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347119-347541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348093-348578:1:exon

LOC116436908
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 349112..364039
location: region:349112-364039:1
so has part: feature:349112-364039:1:exon
subclass of: SO_0000010

116436908
type: Gene
SIO_000068: ncbigene

position:349112:1
position: 349112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364039:1
position: 364039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349112-364039:1:exon

LOC116436908
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436908
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_032094357.1
SIO_010081: LOC116436908
subclass of: SO_0000673
so part of: LOC116436908
location: join(349112..350168,362485..364039)
location: region:349112-364039:1
so has part: feature:349112-350168:1:exon
so has part: feature:362485-364039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:349112-350168:1:exon

position:350168:1
position: 350168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:362485-364039:1:exon

position:362485:1
position: 362485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436908
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MAARAGPVPGLLLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGRSPVRRRRSSEAAPAQDLSFPRCGRMEEEEKLQTCHTRSGCRCSPERSKEERAPLCREGGRRSRGSSELGEKPQGGEKPHKCLECGKSFSYKSRLIEHQRIHTGEKPYECGECGKSFSQNSNLIQHRRLHTGERPYVCGQCGKGFTNSSQLIQHQVVHTRDRPYECRECGKSFWQSSSLRAHRLTHTGERPYECSECGKRFPSSSNLLKHQRIHTDERPFRCPDCGKGFKYNSILVTHRRIHTGERPYECPQCGKSFSQSSTLTQHQRRHR
SIO_010081: LOC116436908
subclass of: SO_0000673
so part of: LOC116436908
location: join(349842..350168,362485..363252)
location: region:349842-363252:1
so has part: feature:349842-350168:1:exon
so has part: feature:362485-363252:1:exon

XP_031950248.1
type: Protein
SIO_000068: ncbiprotein

position:349842:1
position: 349842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363252:1
position: 363252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349842-350168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362485-363252:1:exon

LOC116436930
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(381403..382789)
location: region:381403-382789:-1
so has part: feature:381403-382789:-1:exon
subclass of: SO_0000010

116436930
type: Gene
SIO_000068: ncbigene

position:381403:-1
position: 381403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382789:-1
position: 382789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381403-382789:-1:exon

LOC116436930
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436930
product: zinc finger protein 572-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032094387.1
SIO_010081: LOC116436930
subclass of: SO_0000673
so part of: LOC116436930
location: complement(join(381403..382347,382720..382789))
location: region:381403-382789:-1
so has part: feature:382720-382789:-1:exon
so has part: feature:381403-382347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:382720-382789:-1:exon

position:382720:-1
position: 382720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:381403-382347:-1:exon

position:382347:-1
position: 382347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436930
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 572-like
translation: MEEEAVRKMPREPQAGTELQMETRENKSLWQNLVEEAALSGSMAQESHREEKPKGSPTRRGSKASPGCSEEKRPPLCFIQRSNLVVHEQLHTGEKPYKCLECGKSFSHTSHLFIHHQIHTGGWPYKCLECGKSFSHSSSLIRHYRIHTGERPYKCLQCGKSFCQSSSLTCHQEMHARGGPFECPECGKMFQWISYLIVHQQTHTGERPFRCTDCGKSFKWSSQLTSHQRIHTREXALECPECGKSFSWSSSLRKHQQRHQ
SIO_010081: LOC116436930
subclass of: SO_0000673
so part of: LOC116436930
location: complement(join(381612..382347,382720..382765))
location: region:381612-382765:-1
so has part: feature:382720-382765:-1:exon
so has part: feature:381612-382347:-1:exon

XP_031950278.1
type: Protein
SIO_000068: ncbiprotein

position:381612:-1
position: 381612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382765:-1
position: 382765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382720-382765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381612-382347:-1:exon

LOC116436926
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 387155..388207
location: region:387155-388207:1
so has part: feature:387155-388207:1:exon
subclass of: SO_0000010

116436926
type: Gene
SIO_000068: ncbigene

position:387155:1
position: 387155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388207:1
position: 388207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387155-388207:1:exon

LOC116436926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436926
product: zinc finger protein 79-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094383.1
SIO_010081: LOC116436926
subclass of: SO_0000673
so part of: LOC116436926
location: 387155..388207
location: region:387155-388207:1
so has part: feature:387155-388207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387155-388207:1:exon

LOC116436926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 79-like
translation: MEEEEKPRRCCTRRGCKRSPERSKEERAPLCREGGRRSRGSSELGEKPQGGEKPHKCLECGKGFRWSSSLIQHQRIHTGERPYECGKCGKGFSSISQLIQHQVVHTRERPYGCSECGKSFWQSSSLWGHQRTHTGERPYECSECGKRFRTSSHLLEHQRIHTDERPFCCPNCGKGFKRYAHLTLHRRTHTGERPYECPQCGKSFSSSSALTKHQRRHR
SIO_010081: LOC116436926
subclass of: SO_0000673
so part of: LOC116436926
location: 387174..387830
location: region:387174-387830:1
so has part: feature:387174-387830:1:exon

XP_031950274.1
type: Protein
SIO_000068: ncbiprotein

position:387174:1
position: 387174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387830:1
position: 387830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387174-387830:1:exon

LOC116436937
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(393612..395387)
location: region:393612-395387:-1
so has part: feature:393612-395387:-1:exon
subclass of: SO_0000010

116436937
type: Gene
SIO_000068: ncbigene

position:393612:-1
position: 393612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395387:-1
position: 395387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393612-395387:-1:exon

LOC116436937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436937
product: class II histocompatibility antigen, B-L beta chain-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032094394.1
SIO_010081: LOC116436937
subclass of: SO_0000673
so part of: LOC116436937
location: complement(join(393612..393784,393885..393985,394591..394870,395121..395387))
location: region:393612-395387:-1
so has part: feature:395121-395387:-1:exon
so has part: feature:394591-394870:-1:exon
so has part: feature:393885-393985:-1:exon
so has part: feature:393612-393784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395121-395387:-1:exon

position:395121:-1
position: 395121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394591-394870:-1:exon

position:394591:-1
position: 394591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394870:-1
position: 394870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:393885-393985:-1:exon

position:393885:-1
position: 393885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393985:-1
position: 393985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:393612-393784:-1:exon

position:393784:-1
position: 393784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436937
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: class II histocompatibility antigen, B-L beta chain-like
translation: MVKSECHFINGTARVSFVERHIYNRQQYVHLDSDVGVFVGDTPDGEKVARYWNSDPEWMEYMQAAVHTCCRHNYEVFTPFLMGRRVPPSVSISLVPSSSQPGPSCLLCSGMDFYPVQVQLRWFQGQQGLSGHVVATDIVPNGVWTHQLLVLLETXPQRGVSSSCRVEHVSLEQPLNRHWEMPLDASCSKMLTGTGGFVLGFVFLVLGFYLSKQSS
SIO_010081: LOC116436937
subclass of: SO_0000673
so part of: LOC116436937
location: complement(join(393776..393784,393885..393985,394591..394870,395121..395376))
location: region:393776-395376:-1
so has part: feature:395121-395376:-1:exon
so has part: feature:394591-394870:-1:exon
so has part: feature:393885-393985:-1:exon
so has part: feature:393776-393784:-1:exon

XP_031950285.1
type: Protein
SIO_000068: ncbiprotein

position:393776:-1
position: 393776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395376:-1
position: 395376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395121-395376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394591-394870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:393885-393985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393776-393784:-1:exon

LOC116436869
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 409591..415298
location: region:409591-415298:1
so has part: feature:409591-415298:1:exon
subclass of: SO_0000010

116436869
type: Gene
SIO_000068: ncbigene

position:409591:1
position: 409591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415298:1
position: 415298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409591-415298:1:exon

LOC116436869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436869
product: serine/threonine-protein kinase pim-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 21 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094288.1
SIO_010081: LOC116436869
subclass of: SO_0000673
so part of: LOC116436869
location: join(409591..409817,410632..411661,411779..411829,412035..412401,413070..413246,413495..413644,414602..414736,415024..415298)
location: region:409591-415298:1
so has part: feature:409591-409817:1:exon
so has part: feature:410632-411661:1:exon
so has part: feature:411779-411829:1:exon
so has part: feature:412035-412401:1:exon
so has part: feature:413070-413246:1:exon
so has part: feature:413495-413644:1:exon
so has part: feature:414602-414736:1:exon
so has part: feature:415024-415298:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409591-409817:1:exon

position:409817:1
position: 409817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:410632-411661:1:exon

position:410632:1
position: 410632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411661:1
position: 411661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:411779-411829:1:exon

position:411779:1
position: 411779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411829:1
position: 411829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:412035-412401:1:exon

position:412035:1
position: 412035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412401:1
position: 412401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:413070-413246:1:exon

position:413070:1
position: 413070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413246:1
position: 413246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:413495-413644:1:exon

position:413495:1
position: 413495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413644:1
position: 413644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:414602-414736:1:exon

position:414602:1
position: 414602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414736:1
position: 414736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:415024-415298:1:exon

position:415024:1
position: 415024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase pim-2-like
translation: MDREWGPPCVTPVSPPPGGPWEAPQPQIGTQRTPKAQRPPPKPPHSPQGPTKIAREYQIIREGAEQPSANQSARRCLKANRCPVAAGAKTPGRLLGNGGREEPFKGKRVQKCSQWPSGFGVAAGGRDAPGLRLGPGAERPVLPRGARGSAVGRAGGNGHTGTGHTDTRTNAPSASAAAAAAAAAAAAAQEQHKSSESTNPLRPFSCSSSPSPSVSHPLPLSLSFPNPPSRGLPLPTPGRAMPPARPRPRAGLPPPRPRASRRGPASARLSPSWLWRCWAGISAWLLGTIASPWLRLARPRPRPRPRLLPGPAGDTGGAAAPAASSASSPLRTPPLFSPAAGPEPPVSASKEPTCGDGRPGAVERRSGAVPGPGPSADGRVSPARKAQQGLKERYRLGSLLGRGGFGSVLAATRLSDGAPVAIKRVPRNRIHHWGRLPDGTRAPLEIVLLHKVSAGFPGIVQLHEWLELPNNVVMVLERPERSQDLLHFIRARGFLCEEVARHLFRQVLEAVRHCTSCGVLHRDIKPENILLDLATGQAKLIDFGCGTYLQAAAYTSFAGTPSYRPPEWIQFGWYYGKAATVWSLGIVLHQMVCGEHPFRRGWNSTWGRLSLPRRLSPECQDLIRRCLSVLSSERPSLEDLSCDPWMQDIHVP
SIO_010081: LOC116436869
subclass of: SO_0000673
so part of: LOC116436869
location: join(409591..409817,410632..411661,411779..411829,412035..412401,413070..413246,413495..413601)
location: region:409591-413601:1
so has part: feature:409591-409817:1:exon
so has part: feature:410632-411661:1:exon
so has part: feature:411779-411829:1:exon
so has part: feature:412035-412401:1:exon
so has part: feature:413070-413246:1:exon
so has part: feature:413495-413601:1:exon

XP_031950179.1
type: Protein
SIO_000068: ncbiprotein

position:413601:1
position: 413601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409591-409817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:410632-411661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:411779-411829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412035-412401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:413070-413246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:413495-413601:1:exon

LOC116436918
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 419741..428537
location: region:419741-428537:1
so has part: feature:419741-428537:1:exon
subclass of: SO_0000010

116436918
type: Gene
SIO_000068: ncbigene

position:419741:1
position: 419741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428537:1
position: 428537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419741-428537:1:exon

LOC116436918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436918
product: zinc finger protein 22-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_032094366.1
SIO_010081: LOC116436918
subclass of: SO_0000673
so part of: LOC116436918
location: join(419741..420751,427614..428537)
location: region:419741-428537:1
so has part: feature:419741-420751:1:exon
so has part: feature:427614-428537:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:419741-420751:1:exon

position:420751:1
position: 420751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427614-428537:1:exon

position:427614:1
position: 427614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 22-like
translation: MAARAGPVPGLLLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGRSPVRRRRSSEAAPAQDLSFPRCGQMEEEEKPWRCHRRRGCKRSPERSKEERAPLCQEGGRRSRRSSELGEKPQGGEKPHKCLECGKGFRWSSSLIRHQRIHTGEKPYECGECGKSFSQSYSLRAHQRTHTGERPYECSECGKRFQRSSHLLEHQRIHTDERPFRCPDCKMGFKRNAHLTLHWRTHTGERPYECPECGKSFSQSSNLTQHQWRFH
SIO_010081: LOC116436918
subclass of: SO_0000673
so part of: LOC116436918
location: join(420425..420751,427614..428213)
location: region:420425-428213:1
so has part: feature:420425-420751:1:exon
so has part: feature:427614-428213:1:exon

XP_031950257.1
type: Protein
SIO_000068: ncbiprotein

position:420425:1
position: 420425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428213:1
position: 428213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420425-420751:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427614-428213:1:exon

LOC116436918
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: LOC116436918
product: zinc finger protein 22-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XR_004237097.1
SIO_010081: LOC116436918
so part of: LOC116436918
location: join(420698..420751,423073..423282)
location: region:420698-423282:1
so has part: feature:420698-420751:1:exon
so has part: feature:423073-423282:1:exon

position:420698:1
position: 420698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423282:1
position: 423282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420698-420751:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423073-423282:1:exon

position:423073:1
position: 423073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436910
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(436628..482717)
location: region:436628-482717:-1
so has part: feature:436628-482717:-1:exon
subclass of: SO_0000010

116436910
type: Gene
SIO_000068: ncbigene

position:436628:-1
position: 436628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482717:-1
position: 482717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436628-482717:-1:exon

LOC116436910
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436910
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032094360.1
SIO_010081: LOC116436910
subclass of: SO_0000673
so part of: LOC116436910
location: complement(join(436628..436777,454228..456054,482659..482717))
location: region:436628-482717:-1
so has part: feature:482659-482717:-1:exon
so has part: feature:454228-456054:-1:exon
so has part: feature:436628-436777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482659-482717:-1:exon

position:482659:-1
position: 482659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454228-456054:-1:exon

position:454228:-1
position: 454228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456054:-1
position: 456054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436628-436777:-1:exon

position:436777:-1
position: 436777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MPGDRLWLEEPAAQGAHALFLLPNQDLSFPSCGQMEEEEKPRRCRTRRGCKRSPERSKEERAPLIREGSRRSRGSLELVEEPQGGEKPHKCLECGKGFRWSCKLREHQRIHTGEKPYECGECGKDFSRSSHLVQHQRIHTGERPYVCGECGKSFCQSSSLIHHQRIHTGEKPYECLECGKSFRQCSGLIQHQRIHTGERPYECGQCGKGFTSSSQLIQHQVVHTGERPYGCLECGKSFGLSSDLRAHQRTHTGERPYECSECGKRFQTSSDLLKHERIHTDERPFRCPNCRKGFKHNSHLVKHQRIHTGERPYECPKCGKSFSQSSHLTRHQRSHH
SIO_010081: LOC116436910
subclass of: SO_0000673
so part of: LOC116436910
location: complement(455037..456047)
location: region:455037-456047:-1
so has part: feature:455037-456047:-1:exon

XP_031950251.1
type: Protein
SIO_000068: ncbiprotein

position:455037:-1
position: 455037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456047:-1
position: 456047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455037-456047:-1:exon

LOC116436886
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 484434..647768
location: region:484434-647768:1
so has part: feature:484434-647768:1:exon
subclass of: SO_0000010

116436886
type: Gene
SIO_000068: ncbigene

position:484434:1
position: 484434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647768:1
position: 647768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484434-647768:1:exon

LOC116436886
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436886
product: zinc finger protein 660-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 364 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094315.1
SIO_010081: LOC116436886
subclass of: SO_0000673
so part of: LOC116436886
location: join(484434..485285,494437..494624,645610..646853,647479..647768)
location: region:484434-647768:1
so has part: feature:484434-485285:1:exon
so has part: feature:494437-494624:1:exon
so has part: feature:645610-646853:1:exon
so has part: feature:647479-647768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:484434-485285:1:exon

position:485285:1
position: 485285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494437-494624:1:exon

position:494437:1
position: 494437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494624:1
position: 494624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645610-646853:1:exon

position:645610:1
position: 645610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646853:1
position: 646853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:647479-647768:1:exon

position:647479:1
position: 647479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436886
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 660-like
translation: MAARAGPVPGLFLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGGRSPVRRRRSSEAAPAQDLSFPRRGWMEKEEKPRRCRRRRGCKRSPERSKEERAPLCREGSPRSRGSLEVGEKPQGGEKPQAREKPQAREKPYKCLECGKSFSQSSNLIRHQVIHTGEKPYTCLECGKSFSQSSHLVRHEVTHTGEKPYECGECGKSFGCNSDLNKHRKIHSGKRPYECGECGKSFSQSSNLIRHQTIHTGERPYKCLECGKSFRRNSSLNVHRRSHTGERPYECSECGKRFQTTTKLLQHQPTHTEERPFRCADCGKGFNRNSHLVSHRRMHTGEKPYECLECGKSFSTSSDLIQHQNIHTGERPYKCRECGKSFTWNSNLNKHLKIHTGERPYECVECGKRFRWRSHLISHQNIHTSKREWPYKCLECRKSFSNNSDLIKHQRIHTGERPYECGECGKSFSQSSNLIRHQTIHTRERPYRCLECGKGFNRNSHLIRHRRIHTGERPYECPKCGKSFSQSSQLTQHQRSHQ
SIO_010081: LOC116436886
subclass of: SO_0000673
so part of: LOC116436886
location: join(484956..485285,494437..494624,645610..646819)
location: region:484956-646819:1
so has part: feature:484956-485285:1:exon
so has part: feature:494437-494624:1:exon
so has part: feature:645610-646819:1:exon

XP_031950206.1
type: Protein
SIO_000068: ncbiprotein

position:484956:1
position: 484956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646819:1
position: 646819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484956-485285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494437-494624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645610-646819:1:exon

LOC116436931
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 493636..1003045
location: region:493636-1003045:1
so has part: feature:493636-1003045:1:exon
subclass of: SO_0000010

116436931
type: Gene
SIO_000068: ncbigene

position:493636:1
position: 493636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003045:1
position: 1003045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493636-1003045:1:exon

LOC116436931
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436931
product: zinc finger protein 79-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032094388.1
SIO_010081: LOC116436931
subclass of: SO_0000673
so part of: LOC116436931
location: join(493636..493729,1001424..1003045)
location: region:493636-1003045:1
so has part: feature:493636-493729:1:exon
so has part: feature:1001424-1003045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:493636-493729:1:exon

position:493729:1
position: 493729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1001424-1003045:1:exon

position:1001424:1
position: 1001424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436900
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(524607..533475)
location: region:524607-533475:-1
so has part: feature:524607-533475:-1:exon
subclass of: SO_0000010

116436900
type: Gene
SIO_000068: ncbigene

position:524607:-1
position: 524607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533475:-1
position: 533475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524607-533475:-1:exon

LOC116436900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436900
product: zinc finger protein 883-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_032094343.1
SIO_010081: LOC116436900
subclass of: SO_0000673
so part of: LOC116436900
location: complement(join(524607..526194,533015..533475))
location: region:524607-533475:-1
so has part: feature:533015-533475:-1:exon
so has part: feature:524607-526194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533015-533475:-1:exon

position:533015:-1
position: 533015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:524607-526194:-1:exon

position:526194:-1
position: 526194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 883-like
translation: MAARAGPVPGLLLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGRSPVRRRRSSEAAPAQDLSFPRRGQMEEEEKPRRCRTRRGCKRSPERSKEERASLCREGGRRSRGSSELGKKPQGREKPHKCLECGKGFRWSSSLIRHQRIHNGEKPYECGECGKSFSRNCTLREHQRTHTGERPYECEECGKRFSQSSSLRDHQRIHTGERPYECGECGKSFSHVSSLIQHQRIHTGKKPYECGECGKSFCQSSNLIQHERIHTGERPYECGECGKGFTNSSQLIQHQVVHTGERPYGCSECGKSFWRSSILREHLRTHTGEQPFECSECGKRFRRRSDLLVHHRIHTDERPFRCPDCGMGFKRNSHLTIHRRIHTGERPYECSECGKSFSVRFNLTQHQRRHR
SIO_010081: LOC116436900
subclass of: SO_0000673
so part of: LOC116436900
location: complement(join(525175..526194,533015..533341))
location: region:525175-533341:-1
so has part: feature:533015-533341:-1:exon
so has part: feature:525175-526194:-1:exon

XP_031950234.1
type: Protein
SIO_000068: ncbiprotein

position:525175:-1
position: 525175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533341:-1
position: 533341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533015-533341:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525175-526194:-1:exon

LOC116436957
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(537681..671417)
location: region:537681-671417:-1
so has part: feature:537681-671417:-1:exon
subclass of: SO_0000011

116436957
type: Gene
SIO_000068: ncbigene

position:537681:-1
position: 537681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671417:-1
position: 671417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537681-671417:-1:exon

LOC116436957
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436957
product: uncharacterized LOC116436957
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004237126.1
SIO_010081: LOC116436957
subclass of: SO_0000673
so part of: LOC116436957
location: complement(join(537681..538258,614392..614396,615658..615666,658895..658901,671369..671417))
location: region:537681-671417:-1
so has part: feature:671369-671417:-1:exon
so has part: feature:658895-658901:-1:exon
so has part: feature:615658-615666:-1:exon
so has part: feature:614392-614396:-1:exon
so has part: feature:537681-538258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:671369-671417:-1:exon

position:671369:-1
position: 671369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:658895-658901:-1:exon

position:658895:-1
position: 658895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658901:-1
position: 658901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:615658-615666:-1:exon

position:615658:-1
position: 615658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615666:-1
position: 615666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614392-614396:-1:exon

position:614392:-1
position: 614392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614396:-1
position: 614396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:537681-538258:-1:exon

position:538258:-1
position: 538258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436903
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 566535..581030
location: region:566535-581030:1
so has part: feature:566535-581030:1:exon
subclass of: SO_0000010

116436903
type: Gene
SIO_000068: ncbigene

position:566535:1
position: 566535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581030:1
position: 581030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566535-581030:1:exon

LOC116436903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436903
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_032094347.1
SIO_010081: LOC116436903
subclass of: SO_0000673
so part of: LOC116436903
location: join(566535..566637,571664..571927,572196..572471,572598..572933,573036..573143,573248..573283,573403..573414,580406..580426,580681..581030)
location: region:566535-581030:1
so has part: feature:566535-566637:1:exon
so has part: feature:571664-571927:1:exon
so has part: feature:572196-572471:1:exon
so has part: feature:572598-572933:1:exon
so has part: feature:573036-573143:1:exon
so has part: feature:573248-573283:1:exon
so has part: feature:573403-573414:1:exon
so has part: feature:580406-580426:1:exon
so has part: feature:580681-581030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:566535-566637:1:exon

position:566637:1
position: 566637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:571664-571927:1:exon

position:571664:1
position: 571664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571927:1
position: 571927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:572196-572471:1:exon

position:572196:1
position: 572196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572471:1
position: 572471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:572598-572933:1:exon

position:572598:1
position: 572598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572933:1
position: 572933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:573036-573143:1:exon

position:573036:1
position: 573036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573143:1
position: 573143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:573248-573283:1:exon

position:573248:1
position: 573248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573283:1
position: 573283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:573403-573414:1:exon

position:573403:1
position: 573403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573414:1
position: 573414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:580406-580426:1:exon

position:580406:1
position: 580406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580426:1
position: 580426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:580681-581030:1:exon

position:580681:1
position: 580681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436903
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 140 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 136 samples with support for all annotated introns
transcript id: XM_032094349.1
SIO_010081: LOC116436903
subclass of: SO_0000673
so part of: LOC116436903
location: join(566535..566637,571664..571927,572196..572471,572661..572933,573036..573143,573248..573283,573403..573414,580406..580426,580681..581030)
location: region:566535-581030:1
so has part: feature:566535-566637:1:exon
so has part: feature:571664-571927:1:exon
so has part: feature:572196-572471:1:exon
so has part: feature:572661-572933:1:exon
so has part: feature:573036-573143:1:exon
so has part: feature:573248-573283:1:exon
so has part: feature:573403-573414:1:exon
so has part: feature:580406-580426:1:exon
so has part: feature:580681-581030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:566535-566637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571664-571927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572196-572471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572661-572933:1:exon

position:572661:1
position: 572661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:573036-573143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573248-573283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573403-573414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:580406-580426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:580681-581030:1:exon

LOC116436903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X1
translation: MAPAPDLGVLLGLLGLLGAPGGATKVLHSLRYLHVAVSEPGPGVPQFVSVGFLDGIPFWRYDSERGRMEPQTPWMEEGPEPGYWDGQTEICKGNQHTDAIDLETLRARYNQSGGLHTLQYIYGCDLLSDGSVHGSFRYGYDGRDFLSFEPGSQSFVVADGTAQVTRRLRNSDGFTVERQKNYLKHICPEELRKYVRYGRQALEHKDLIPIPFLWNSMDASHRYPIPEPPDVHVSGKEEFGTLILSCHVYGFYPRPIAVSWMKGDEIRDQETEWGGVVPNSDGTFHTWARIEARPEEWEQYRCRVEHSGMPEPGIFTWEPESGRNLTLVVAVFVIAAIVILIPLVGFIVWKLQSGRRQNHGYSPPAGKDMGTNGSSADNSLRTIFC
SIO_010081: LOC116436903
subclass of: SO_0000673
so part of: LOC116436903
location: join(566562..566637,571664..571927,572196..572471,572598..572933,573036..573143,573248..573283,573403..573414,580406..580426,580681..580709)
location: region:566562-580709:1
so has part: feature:566562-566637:1:exon
so has part: feature:571664-571927:1:exon
so has part: feature:572196-572471:1:exon
so has part: feature:572598-572933:1:exon
so has part: feature:573036-573143:1:exon
so has part: feature:573248-573283:1:exon
so has part: feature:573403-573414:1:exon
so has part: feature:580406-580426:1:exon
so has part: feature:580681-580709:1:exon

XP_031950238.1
type: Protein
SIO_000068: ncbiprotein

position:566562:1
position: 566562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580709:1
position: 580709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566562-566637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571664-571927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572196-572471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572598-572933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573036-573143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573248-573283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573403-573414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:580406-580426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:580681-580709:1:exon

LOC116436903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X3
translation: MAPAPDLGVLLGLLGLLGAPGGATKVLHSLRYLHVAVSEPGPGVPQFVSVGFLDGIPFWRYDSERGRMEPQTPWMEEGPEPGYWDGQTEICKGNQHTDAIDLETLRARYNQSGGLHTLQYIYGCDLLSDGSVHGSFRYGYDGRDFLSFEPGSQSFVVADGTAQVTRRLRNSDGFTVERQKNYLKHICPEELRKYVRYGRQALEHKEPPDVHVSGKEEFGTLILSCHVYGFYPRPIAVSWMKGDEIRDQETEWGGVVPNSDGTFHTWARIEARPEEWEQYRCRVEHSGMPEPGIFTWEPESGRNLTLVVAVFVIAAIVILIPLVGFIVWKLQSGRRQNHGYSPPAGKDMGTNGSSADNSLRTIFC
SIO_010081: LOC116436903
subclass of: SO_0000673
so part of: LOC116436903
location: join(566562..566637,571664..571927,572196..572471,572661..572933,573036..573143,573248..573283,573403..573414,580406..580426,580681..580709)
location: region:566562-580709:1
so has part: feature:566562-566637:1:exon
so has part: feature:571664-571927:1:exon
so has part: feature:572196-572471:1:exon
so has part: feature:572661-572933:1:exon
so has part: feature:573036-573143:1:exon
so has part: feature:573248-573283:1:exon
so has part: feature:573403-573414:1:exon
so has part: feature:580406-580426:1:exon
so has part: feature:580681-580709:1:exon

XP_031950240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566562-566637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571664-571927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572196-572471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572661-572933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573036-573143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573248-573283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573403-573414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:580406-580426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:580681-580709:1:exon

LOC116436903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436903
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_032094348.1
SIO_010081: LOC116436903
subclass of: SO_0000673
so part of: LOC116436903
location: join(569779..569874,571664..571927,572196..572471,572598..572933,573036..573143,573248..573283,573403..573414,580406..580426,580681..581030)
location: region:569779-581030:1
so has part: feature:569779-569874:1:exon
so has part: feature:571664-571927:1:exon
so has part: feature:572196-572471:1:exon
so has part: feature:572598-572933:1:exon
so has part: feature:573036-573143:1:exon
so has part: feature:573248-573283:1:exon
so has part: feature:573403-573414:1:exon
so has part: feature:580406-580426:1:exon
so has part: feature:580681-581030:1:exon

position:569779:1
position: 569779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569779-569874:1:exon

position:569874:1
position: 569874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:571664-571927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572196-572471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572598-572933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573036-573143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573248-573283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573403-573414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:580406-580426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:580681-581030:1:exon

LOC116436903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X2
translation: MAPAPALGVLLGLLGALGRVKKVLHSLRYLHVAVSEPGPGVPQFVSVGFLDGIPFWRYDSERGRMEPQTPWMEEGPEPGYWDGQTEICKGNQHTDAIDLETLRARYNQSGGLHTLQYIYGCDLLSDGSVHGSFRYGYDGRDFLSFEPGSQSFVVADGTAQVTRRLRNSDGFTVERQKNYLKHICPEELRKYVRYGRQALEHKDLIPIPFLWNSMDASHRYPIPEPPDVHVSGKEEFGTLILSCHVYGFYPRPIAVSWMKGDEIRDQETEWGGVVPNSDGTFHTWARIEARPEEWEQYRCRVEHSGMPEPGIFTWEPESGRNLTLVVAVFVIAAIVILIPLVGFIVWKLQSGRRQNHGYSPPAGKDMGTNGSSADNSLRTIFC
SIO_010081: LOC116436903
subclass of: SO_0000673
so part of: LOC116436903
location: join(569808..569874,571664..571927,572196..572471,572598..572933,573036..573143,573248..573283,573403..573414,580406..580426,580681..580709)
location: region:569808-580709:1
so has part: feature:569808-569874:1:exon
so has part: feature:571664-571927:1:exon
so has part: feature:572196-572471:1:exon
so has part: feature:572598-572933:1:exon
so has part: feature:573036-573143:1:exon
so has part: feature:573248-573283:1:exon
so has part: feature:573403-573414:1:exon
so has part: feature:580406-580426:1:exon
so has part: feature:580681-580709:1:exon

XP_031950239.1
type: Protein
SIO_000068: ncbiprotein

position:569808:1
position: 569808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569808-569874:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571664-571927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572196-572471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572598-572933:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573036-573143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573248-573283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573403-573414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:580406-580426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:580681-580709:1:exon

LOC116436899
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436899
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 589649..621566
location: region:589649-621566:1
so has part: feature:589649-621566:1:exon
subclass of: SO_0000010

116436899
type: Gene
SIO_000068: ncbigene

position:589649:1
position: 589649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621566:1
position: 621566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589649-621566:1:exon

LOC116436899
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436899
product: zinc finger protein 850-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 223 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094342.1
SIO_010081: LOC116436899
subclass of: SO_0000673
so part of: LOC116436899
location: join(589649..589867,604839..606252,619754..621566)
location: region:589649-621566:1
so has part: feature:589649-589867:1:exon
so has part: feature:604839-606252:1:exon
so has part: feature:619754-621566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:589649-589867:1:exon

position:589867:1
position: 589867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604839-606252:1:exon

position:604839:1
position: 604839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606252:1
position: 606252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:619754-621566:1:exon

position:619754:1
position: 619754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436899
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: LOC116436899
product: zinc finger protein 850-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 224 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XR_004237092.1
SIO_010081: LOC116436899
so part of: LOC116436899
location: join(589649..589867,604839..606950,608299..608371,608699..609412)
location: region:589649-609412:1
so has part: feature:589649-589867:1:exon
so has part: feature:604839-606950:1:exon
so has part: feature:608299-608371:1:exon
so has part: feature:608699-609412:1:exon

position:609412:1
position: 609412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589649-589867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604839-606950:1:exon

position:606950:1
position: 606950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:608299-608371:1:exon

position:608299:1
position: 608299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608371:1
position: 608371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:608699-609412:1:exon

position:608699:1
position: 608699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436899
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436899
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 850-like
translation: MEEEEKPRRCRMRRGCKSSPERSKEERAPLCQEGGRRSRGKSFSQRSNLIQHQRIHTGEQPYECGKCGKSFSQSSSFLSHHKIHSGAKPYECGECGKSFRWRSHLREHQNIHTGERPHECGECRKRFSWRSSLINHFKVHTGKRPYACGECGKGFRTSTLLIRHQFIHTGERPYECGECGKSFSRNFNLREHQRIHTGERPYKCPKCEKRFRRSCDLLVHQRIHTEEKPFYCPDCGKGFKQNFALVLHRRIHTGERPYECPECGKRFVRSSDLNKHQPIHTGERPFRCPDCRKGFNDSSNLVRHRRIHTGERPHLIHHQVIHTGERPYECGECGKSFSHSSDLINHRMIHMGEGPYPCSECGKSFSRNSHLRVHQRIHSGERPYKCPECGKTFQSTTALLRHERIHTDERPFRCPDCGKGFKQNSTLIRHRCIHTGERPYECPQCGKSFSQSFNLTQHQQRHRGEKPHKCLECGKGFRWNSNLREHQRIHTGEKPYKCGECGKGFTNSSQLIQHQVVHTRERPYGCRECGKSFSQSSSLWAHRRTHTGERPYECSECGKRFPRSSYLIRHQSTHTDERPFRCPECGKGFKRNAHLIIHQRTHTGERPYECSECGKSFFSSSHLAEHQRRHR
SIO_010081: LOC116436899
subclass of: SO_0000673
so part of: LOC116436899
location: join(604866..606252,619754..620262)
location: region:604866-620262:1
so has part: feature:604866-606252:1:exon
so has part: feature:619754-620262:1:exon

XP_031950233.1
type: Protein
SIO_000068: ncbiprotein

position:604866:1
position: 604866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620262:1
position: 620262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604866-606252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619754-620262:1:exon

LOC116436899
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: LOC116436899
product: zinc finger protein 850-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 127 samples with support for all annotated introns
transcript id: XR_004237093.1
SIO_010081: LOC116436899
so part of: LOC116436899
location: join(607959..608083,608299..608371,608699..609412)
location: region:607959-609412:1
so has part: feature:607959-608083:1:exon
so has part: feature:608299-608371:1:exon
so has part: feature:608699-609412:1:exon

position:607959:1
position: 607959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607959-608083:1:exon

position:608083:1
position: 608083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:608299-608371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608699-609412:1:exon

LOC116436935
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 611087..618044
location: region:611087-618044:1
so has part: feature:611087-618044:1:exon
subclass of: SO_0000010

116436935
type: Gene
SIO_000068: ncbigene

position:611087:1
position: 611087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618044:1
position: 618044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611087-618044:1:exon

LOC116436935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436935
product: uncharacterized LOC116436935
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032094392.1
SIO_010081: LOC116436935
subclass of: SO_0000673
so part of: LOC116436935
location: join(611087..611490,617239..618044)
location: region:611087-618044:1
so has part: feature:611087-611490:1:exon
so has part: feature:617239-618044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:611087-611490:1:exon

position:611490:1
position: 611490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:617239-618044:1:exon

position:617239:1
position: 617239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436935
translation: MAARAGPVPGLLLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRRCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGRSPVRRRRSSEAAPAQVSDSEWIERPLCPSGAASSRSRGALNVLKGSGAVGPWCAGSSESPDNPCPSGVDLLVLRVLLSVLAVSLWPAAGALIPWQGLFGWALPCRGGQCLCQVLVAAAVPWVLGPPWALRFIPGGL
SIO_010081: LOC116436935
subclass of: SO_0000673
so part of: LOC116436935
location: join(611164..611490,617239..617604)
location: region:611164-617604:1
so has part: feature:611164-611490:1:exon
so has part: feature:617239-617604:1:exon

XP_031950283.1
type: Protein
SIO_000068: ncbiprotein

position:611164:1
position: 611164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617604:1
position: 617604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611164-611490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617239-617604:1:exon

LOC116436955
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(632434..642101)
location: region:632434-642101:-1
so has part: feature:632434-642101:-1:exon
subclass of: SO_0000011

116436955
type: Gene
SIO_000068: ncbigene

position:632434:-1
position: 632434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642101:-1
position: 642101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632434-642101:-1:exon

LOC116436955
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436955
product: uncharacterized LOC116436955
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XR_004237124.1
SIO_010081: LOC116436955
subclass of: SO_0000673
so part of: LOC116436955
location: complement(join(632434..632444,636930..636934,642020..642101))
location: region:632434-642101:-1
so has part: feature:642020-642101:-1:exon
so has part: feature:636930-636934:-1:exon
so has part: feature:632434-632444:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:642020-642101:-1:exon

position:642020:-1
position: 642020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:636930-636934:-1:exon

position:636930:-1
position: 636930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636934:-1
position: 636934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:632434-632444:-1:exon

position:632444:-1
position: 632444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436897
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 651933..669446
location: region:651933-669446:1
so has part: feature:651933-669446:1:exon
subclass of: SO_0000010

116436897
type: Gene
SIO_000068: ncbigene

position:651933:1
position: 651933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669446:1
position: 669446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651933-669446:1:exon

LOC116436897
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436897
product: zinc finger protein 660-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_032094340.1
SIO_010081: LOC116436897
subclass of: SO_0000673
so part of: LOC116436897
location: join(651933..652485,660237..660324,660505..661423,669372..669446)
location: region:651933-669446:1
so has part: feature:651933-652485:1:exon
so has part: feature:660237-660324:1:exon
so has part: feature:660505-661423:1:exon
so has part: feature:669372-669446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:651933-652485:1:exon

position:652485:1
position: 652485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660237-660324:1:exon

position:660237:1
position: 660237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660324:1
position: 660324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:660505-661423:1:exon

position:660505:1
position: 660505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661423:1
position: 661423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:669372-669446:1:exon

position:669372:1
position: 669372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436897
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 660-like
translation: MAARAGPVPGLLLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGRSPVRRRRSSEAAPAQDLSFPRHPSSGQMEEEAVKKRKMSRDPQAGTELQTENREDKCPHQNVVEEAVLSSSTVQESNGEEKLQRSHRRRGCKPSPGSCEEERPTLCWEGGRRSRREWRLELVEKPHSGEKPHKCLQCGKSFSASSHLIQHQRIHTGERPYECLECGKSFRQRQHLTRHQRIHTGEKPYECLECGKGFTEGCSLIVHQRVHTGERPYECGECEKSFIRSSHLLTHQLVHSGERPYECPDCGKRFKDCYYLKHHQKIHSGERPYECPECGKRFRNTSHLLMHEQTHTGERPFRCPDCGKNYKRNSHLVMHRRTHTGEKPYECPECGKSFSYSSALTSHERTHWGSTPGEMGRTLSDTADHSYSN
SIO_010081: LOC116436897
subclass of: SO_0000673
so part of: LOC116436897
location: join(652159..652485,660237..660324,660505..661423,669372..669438)
location: region:652159-669438:1
so has part: feature:652159-652485:1:exon
so has part: feature:660237-660324:1:exon
so has part: feature:660505-661423:1:exon
so has part: feature:669372-669438:1:exon

XP_031950231.1
type: Protein
SIO_000068: ncbiprotein

position:652159:1
position: 652159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669438:1
position: 669438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652159-652485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660237-660324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660505-661423:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669372-669438:1:exon

LOC116436934
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 672496..677971
location: region:672496-677971:1
so has part: feature:672496-677971:1:exon
subclass of: SO_0000010

116436934
type: Gene
SIO_000068: ncbigene

position:672496:1
position: 672496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677971:1
position: 677971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672496-677971:1:exon

LOC116436934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436934
product: H-2 class II histocompatibility antigen, I-E beta chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032094390.1
SIO_010081: LOC116436934
subclass of: SO_0000673
so part of: LOC116436934
location: join(672496..674603,675128..675397,675728..677971)
location: region:672496-677971:1
so has part: feature:672496-674603:1:exon
so has part: feature:675128-675397:1:exon
so has part: feature:675728-677971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:672496-674603:1:exon

position:674603:1
position: 674603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675128-675397:1:exon

position:675128:1
position: 675128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675397:1
position: 675397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:675728-677971:1:exon

position:675728:1
position: 675728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436934
product: H-2 class II histocompatibility antigen, I-E beta chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032094391.1
SIO_010081: LOC116436934
subclass of: SO_0000673
so part of: LOC116436934
location: join(672496..674603,675128..675785)
location: region:672496-675785:1
so has part: feature:672496-674603:1:exon
so has part: feature:675128-675785:1:exon

position:675785:1
position: 675785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672496-674603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675128-675785:1:exon

LOC116436934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HLA class II histocompatibility antigen, DRB1-4 beta chain-like isoform X1
translation: MGPQNALSQSERAALLTPHWSRLELPVQRGCFGAGGTCPALAMGRVAAAGAVLVALVVLGAPPAAGTELSGVFQRRIKVECHFINGTERVRFVQMHSYNREQYTHFDSDVGVCIRDTPDGEKQAWYWNSQLENPEYRWALVDMHCHYNYEIIARFLVSRRAPLGGTAGAAAWEPRQCPSGIHGTHCNGLEFQFPARKRRSCPSRQSSEGAETQVEQDLTVTFHCQPSSPHLWLS
SIO_010081: LOC116436934
subclass of: SO_0000673
so part of: LOC116436934
location: join(674393..674603,675128..675397,675728..675951)
location: region:674393-675951:1
so has part: feature:674393-674603:1:exon
so has part: feature:675128-675397:1:exon
so has part: feature:675728-675951:1:exon

XP_031950281.1
type: Protein
SIO_000068: ncbiprotein

position:674393:1
position: 674393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675951:1
position: 675951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674393-674603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675128-675397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675728-675951:1:exon

LOC116436934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H-2 class II histocompatibility antigen, I-E beta chain-like isoform X2
translation: MGPQNALSQSERAALLTPHWSRLELPVQRGCFGAGGTCPALAMGRVAAAGAVLVALVVLGAPPAAGTELSGVFQRRIKVECHFINGTERVRFVQMHSYNREQYTHFDSDVGVCIRDTPDGEKQAWYWNSQLENPEYRWALVDMHCHYNYEIIARFLVSRRGEHGAERVLSVPALGMTLELLKTSLGITPDPSALLKPISVASRPSQ
SIO_010081: LOC116436934
subclass of: SO_0000673
so part of: LOC116436934
location: join(674393..674603,675128..675537)
location: region:674393-675537:1
so has part: feature:674393-674603:1:exon
so has part: feature:675128-675537:1:exon

XP_031950282.1
type: Protein
SIO_000068: ncbiprotein

position:675537:1
position: 675537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674393-674603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675128-675537:1:exon

LOC116436905
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(685975..690162)
location: region:685975-690162:-1
so has part: feature:685975-690162:-1:exon
subclass of: SO_0000010

116436905
type: Gene
SIO_000068: ncbigene

position:685975:-1
position: 685975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690162:-1
position: 690162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685975-690162:-1:exon

LOC116436905
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: LOC116436905
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 142 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XR_004237095.1
SIO_010081: LOC116436905
so part of: LOC116436905
location: complement(join(685975..685991,686309..686467,686688..686720,686840..686869,686968..687072,687165..687437,687679..687954,688125..688415,690003..690162))
location: region:685975-690162:-1
so has part: feature:690003-690162:-1:exon
so has part: feature:688125-688415:-1:exon
so has part: feature:687679-687954:-1:exon
so has part: feature:687165-687437:-1:exon
so has part: feature:686968-687072:-1:exon
so has part: feature:686840-686869:-1:exon
so has part: feature:686688-686720:-1:exon
so has part: feature:686309-686467:-1:exon
so has part: feature:685975-685991:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:690003-690162:-1:exon

position:690003:-1
position: 690003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688125-688415:-1:exon

position:688125:-1
position: 688125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688415:-1
position: 688415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:687679-687954:-1:exon

position:687679:-1
position: 687679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687954:-1
position: 687954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687165-687437:-1:exon

position:687165:-1
position: 687165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687437:-1
position: 687437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:686968-687072:-1:exon

position:686968:-1
position: 686968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687072:-1
position: 687072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:686840-686869:-1:exon

position:686840:-1
position: 686840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686869:-1
position: 686869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:686688-686720:-1:exon

position:686688:-1
position: 686688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686720:-1
position: 686720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:686309-686467:-1:exon

position:686309:-1
position: 686309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686467:-1
position: 686467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:685975-685991:-1:exon

position:685991:-1
position: 685991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436905
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 174 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_032094354.1
SIO_010081: LOC116436905
subclass of: SO_0000673
so part of: LOC116436905
location: complement(join(685998..686467,686688..686720,686840..686869,686968..687072,687165..687437,687679..687954,688125..688388,690003..690162))
location: region:685998-690162:-1
so has part: feature:690003-690162:-1:exon
so has part: feature:688125-688388:-1:exon
so has part: feature:687679-687954:-1:exon
so has part: feature:687165-687437:-1:exon
so has part: feature:686968-687072:-1:exon
so has part: feature:686840-686869:-1:exon
so has part: feature:686688-686720:-1:exon
so has part: feature:685998-686467:-1:exon

position:685998:-1
position: 685998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690003-690162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688125-688388:-1:exon

position:688388:-1
position: 688388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:687679-687954:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687165-687437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:686968-687072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686840-686869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:686688-686720:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685998-686467:-1:exon

LOC116436905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436905
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 142 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_032094353.1
SIO_010081: LOC116436905
subclass of: SO_0000673
so part of: LOC116436905
location: complement(join(685998..686388,686688..686720,686840..686869,686968..687072,687165..687437,687679..687954,688125..688415,690003..690162))
location: region:685998-690162:-1
so has part: feature:690003-690162:-1:exon
so has part: feature:688125-688415:-1:exon
so has part: feature:687679-687954:-1:exon
so has part: feature:687165-687437:-1:exon
so has part: feature:686968-687072:-1:exon
so has part: feature:686840-686869:-1:exon
so has part: feature:686688-686720:-1:exon
so has part: feature:685998-686388:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:690003-690162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688125-688415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687679-687954:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687165-687437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:686968-687072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686840-686869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:686688-686720:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685998-686388:-1:exon

position:686388:-1
position: 686388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436905
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 142 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_032094352.1
SIO_010081: LOC116436905
subclass of: SO_0000673
so part of: LOC116436905
location: complement(join(685998..686467,686688..686720,686840..686869,686968..687072,687165..687437,687679..687954,688125..688415,690003..690162))
location: region:685998-690162:-1
so has part: feature:690003-690162:-1:exon
so has part: feature:688125-688415:-1:exon
so has part: feature:687679-687954:-1:exon
so has part: feature:687165-687437:-1:exon
so has part: feature:686968-687072:-1:exon
so has part: feature:686840-686869:-1:exon
so has part: feature:686688-686720:-1:exon
so has part: feature:685998-686467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:690003-690162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688125-688415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687679-687954:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687165-687437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:686968-687072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686840-686869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:686688-686720:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685998-686467:-1:exon

LOC116436905
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: LOC116436905
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 142 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XR_004237096.1
SIO_010081: LOC116436905
so part of: LOC116436905
location: complement(join(685998..686467,686688..686720,686840..686895,686968..687072,687165..687437,687679..687954,688125..688415,690003..690162))
location: region:685998-690162:-1
so has part: feature:690003-690162:-1:exon
so has part: feature:688125-688415:-1:exon
so has part: feature:687679-687954:-1:exon
so has part: feature:687165-687437:-1:exon
so has part: feature:686968-687072:-1:exon
so has part: feature:686840-686895:-1:exon
so has part: feature:686688-686720:-1:exon
so has part: feature:685998-686467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:690003-690162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688125-688415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687679-687954:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687165-687437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:686968-687072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686840-686895:-1:exon

position:686895:-1
position: 686895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:686688-686720:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:685998-686467:-1:exon

LOC116436905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X2
translation: MNARRLRKTAIFRRRAGPQRSGSMAPALGAGMLLGLLGLLGAPGAATRVLHSLRFLRVTVSEPSPGLPRFVAVGYVDGIPFASYNSRRGRVEPQTLWMAAGAEPGYWDTETEISERYQHVDPIDLEMLQRQYNQTRGLHTLQVVSGCDLLSNGSIRGSDRYGYDGRDFISFDLGSGSFVAADGTAQIIKRLWESDGITVPELKHELGHTCVEVLKKHVRYRREALERKEAPSVHVSGKVEHKILTLSCRTYRFYPSTIAVSWMKGDEIRDQETEWGGIVPNSDGTFHTWARIEARPEEWEQYWCRVEHPGMPEPGIFTWEPESSRNLILVVTVSVITAIVIILLIGFGIWKLQPVKRNGYNVPA
SIO_010081: LOC116436905
subclass of: SO_0000673
so part of: LOC116436905
location: complement(join(686719..686720,686840..686869,686968..687072,687165..687437,687679..687954,688125..688388,690003..690147))
location: region:686719-690147:-1
so has part: feature:690003-690147:-1:exon
so has part: feature:688125-688388:-1:exon
so has part: feature:687679-687954:-1:exon
so has part: feature:687165-687437:-1:exon
so has part: feature:686968-687072:-1:exon
so has part: feature:686840-686869:-1:exon
so has part: feature:686719-686720:-1:exon

XP_031950245.1
type: Protein
SIO_000068: ncbiprotein

position:686719:-1
position: 686719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690147:-1
position: 690147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690003-690147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688125-688388:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687679-687954:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687165-687437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:686968-687072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686840-686869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:686719-686720:-1:exon

LOC116436905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X1
translation: MNARRLRKTAIFRRRAGPQRSGSMAPALGAGMLLGLLGLLGAPGAATRGPPNLHIPPVLHSLRFLRVTVSEPSPGLPRFVAVGYVDGIPFASYNSRRGRVEPQTLWMAAGAEPGYWDTETEISERYQHVDPIDLEMLQRQYNQTRGLHTLQVVSGCDLLSNGSIRGSDRYGYDGRDFISFDLGSGSFVAADGTAQIIKRLWESDGITVPELKHELGHTCVEVLKKHVRYRREALERKEAPSVHVSGKVEHKILTLSCRTYRFYPSTIAVSWMKGDEIRDQETEWGGIVPNSDGTFHTWARIEARPEEWEQYWCRVEHPGMPEPGIFTWEPESSRNLILVVTVSVITAIVIILLIGFGIWKLQPVKRNGYNVPA
SIO_010081: LOC116436905
subclass of: SO_0000673
so part of: LOC116436905
location: complement(join(686719..686720,686840..686869,686968..687072,687165..687437,687679..687954,688125..688415,690003..690147))
location: region:686719-690147:-1
so has part: feature:690003-690147:-1:exon
so has part: feature:688125-688415:-1:exon
so has part: feature:687679-687954:-1:exon
so has part: feature:687165-687437:-1:exon
so has part: feature:686968-687072:-1:exon
so has part: feature:686840-686869:-1:exon
so has part: feature:686719-686720:-1:exon

XP_031950243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:690003-690147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688125-688415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687679-687954:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687165-687437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:686968-687072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686840-686869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:686719-686720:-1:exon

LOC116436905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X1
translation: MNARRLRKTAIFRRRAGPQRSGSMAPALGAGMLLGLLGLLGAPGAATRGPPNLHIPPVLHSLRFLRVTVSEPSPGLPRFVAVGYVDGIPFASYNSRRGRVEPQTLWMAAGAEPGYWDTETEISERYQHVDPIDLEMLQRQYNQTRGLHTLQVVSGCDLLSNGSIRGSDRYGYDGRDFISFDLGSGSFVAADGTAQIIKRLWESDGITVPELKHELGHTCVEVLKKHVRYRREALERKEAPSVHVSGKVEHKILTLSCRTYRFYPSTIAVSWMKGDEIRDQETEWGGIVPNSDGTFHTWARIEARPEEWEQYWCRVEHPGMPEPGIFTWEPESSRNLILVVTVSVITAIVIILLIGFGIWKLQPVKRNGYNVPA
SIO_010081: LOC116436905
subclass of: SO_0000673
so part of: LOC116436905
location: complement(join(686719..686720,686840..686869,686968..687072,687165..687437,687679..687954,688125..688415,690003..690147))
location: region:686719-690147:-1
so has part: feature:690003-690147:-1:exon
so has part: feature:688125-688415:-1:exon
so has part: feature:687679-687954:-1:exon
so has part: feature:687165-687437:-1:exon
so has part: feature:686968-687072:-1:exon
so has part: feature:686840-686869:-1:exon
so has part: feature:686719-686720:-1:exon

XP_031950244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:690003-690147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688125-688415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687679-687954:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687165-687437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:686968-687072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686840-686869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:686719-686720:-1:exon

LOC116436941
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 692818..695678
location: region:692818-695678:1
so has part: feature:692818-695678:1:exon
subclass of: SO_0000010

116436941
type: Gene
SIO_000068: ncbigene

position:692818:1
position: 692818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695678:1
position: 695678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692818-695678:1:exon

LOC116436941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436941
product: zinc finger protein with KRAB and SCAN domains 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032094398.1
SIO_010081: LOC116436941
subclass of: SO_0000673
so part of: LOC116436941
location: join(692818..692968,694833..694911,695097..695678)
location: region:692818-695678:1
so has part: feature:692818-692968:1:exon
so has part: feature:694833-694911:1:exon
so has part: feature:695097-695678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:692818-692968:1:exon

position:692968:1
position: 692968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694833-694911:1:exon

position:694833:1
position: 694833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694911:1
position: 694911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:695097-695678:1:exon

position:695097:1
position: 695097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436941
product: zinc finger protein with KRAB and SCAN domains 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032094397.1
SIO_010081: LOC116436941
subclass of: SO_0000673
so part of: LOC116436941
location: join(693572..694605,694833..694911,695097..695678)
location: region:693572-695678:1
so has part: feature:693572-694605:1:exon
so has part: feature:694833-694911:1:exon
so has part: feature:695097-695678:1:exon

position:693572:1
position: 693572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693572-694605:1:exon

position:694605:1
position: 694605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694833-694911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:695097-695678:1:exon

LOC116436941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein with KRAB and SCAN domains 1-like
translation: MEEEAVRKRKMPREPQADKELRTETREDKSPQQDLVEEAVLSGFTAQESNGEEKPWRSHRRRGCKPSPGSCEEERPPLCREGGRTSSHSEVAEKPHSGEKPHKCLECGKSFSKSSSLICH
SIO_010081: LOC116436941
subclass of: SO_0000673
so part of: LOC116436941
location: join(694860..694911,695097..695407)
location: region:694860-695407:1
so has part: feature:694860-694911:1:exon
so has part: feature:695097-695407:1:exon

XP_031950288.1
type: Protein
SIO_000068: ncbiprotein

position:694860:1
position: 694860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695407:1
position: 695407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694860-694911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:695097-695407:1:exon

LOC116436941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein with KRAB and SCAN domains 1-like
translation: MEEEAVRKRKMPREPQADKELRTETREDKSPQQDLVEEAVLSGFTAQESNGEEKPWRSHRRRGCKPSPGSCEEERPPLCREGGRTSSHSEVAEKPHSGEKPHKCLECGKSFSKSSSLICH
SIO_010081: LOC116436941
subclass of: SO_0000673
so part of: LOC116436941
location: join(694860..694911,695097..695407)
location: region:694860-695407:1
so has part: feature:694860-694911:1:exon
so has part: feature:695097-695407:1:exon

XP_031950289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694860-694911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:695097-695407:1:exon

LOC116436901
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(698695..702695)
location: region:698695-702695:-1
so has part: feature:698695-702695:-1:exon
subclass of: SO_0000010

116436901
type: Gene
SIO_000068: ncbigene

position:698695:-1
position: 698695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702695:-1
position: 702695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698695-702695:-1:exon

LOC116436901
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436901
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 211 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_032094345.1
SIO_010081: LOC116436901
subclass of: SO_0000673
so part of: LOC116436901
location: complement(join(698695..699646,699761..700033,700275..700550,700721..700984,702599..702695))
location: region:698695-702695:-1
so has part: feature:702599-702695:-1:exon
so has part: feature:700721-700984:-1:exon
so has part: feature:700275-700550:-1:exon
so has part: feature:699761-700033:-1:exon
so has part: feature:698695-699646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702599-702695:-1:exon

position:702599:-1
position: 702599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:700721-700984:-1:exon

position:700721:-1
position: 700721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700984:-1
position: 700984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:700275-700550:-1:exon

position:700275:-1
position: 700275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700550:-1
position: 700550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:699761-700033:-1:exon

position:699761:-1
position: 699761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700033:-1
position: 700033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:698695-699646:-1:exon

position:699646:-1
position: 699646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436901
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: LOC116436901
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 183 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004237094.1
SIO_010081: LOC116436901
so part of: LOC116436901
location: complement(join(698695..698856,699271..699646,699761..700033,700275..700550,700721..701011,702599..702695))
location: region:698695-702695:-1
so has part: feature:702599-702695:-1:exon
so has part: feature:700721-701011:-1:exon
so has part: feature:700275-700550:-1:exon
so has part: feature:699761-700033:-1:exon
so has part: feature:699271-699646:-1:exon
so has part: feature:698695-698856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702599-702695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700721-701011:-1:exon

position:701011:-1
position: 701011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:700275-700550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699761-700033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699271-699646:-1:exon

position:699271:-1
position: 699271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:698695-698856:-1:exon

position:698856:-1
position: 698856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436901
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436901
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 183 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_032094344.1
SIO_010081: LOC116436901
subclass of: SO_0000673
so part of: LOC116436901
location: complement(join(698695..699646,699761..700033,700275..700550,700721..701011,702599..702695))
location: region:698695-702695:-1
so has part: feature:702599-702695:-1:exon
so has part: feature:700721-701011:-1:exon
so has part: feature:700275-700550:-1:exon
so has part: feature:699761-700033:-1:exon
so has part: feature:698695-699646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702599-702695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700721-701011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700275-700550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699761-700033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:698695-699646:-1:exon

LOC116436901
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X2
translation: MAPALGAGMLLGLLGLLGAPGAATRVLHSLRFLRVTVSEPSPGLPRFVAVGYVDGIPFASYNSRRGRVEPQTLWMAAGAEPGYWDTETEISERYQHVDPIDLEMLQRQYNQTRGLHTLQVVSGCDLLSNGSIRGSDRYGYDGRDFISFDLGSGSFVAADGTAQIIKRLWESDGITVPELKHELGHTCVEVLKKHVRYRREALERKEAPSVHVSGKVEHKILTLSCRTYRFYPSTIAVSWMKGDEIRDQETEWGGIVPNSDGTFHTWARMEARPEEWEQYRCRVEHPGMPEPGIFTWEPESSRNLILVVTVSITAIIIILLVRFSVWKLQSSNTLDGGQEGAQIHCVAFQESPTMGADPTVFPSGRARGMNTTQQPGSSSGGSPLCRSQDGSWG
SIO_010081: LOC116436901
subclass of: SO_0000673
so part of: LOC116436901
location: complement(join(699354..699646,699761..700033,700275..700550,700721..700984,702599..702674))
location: region:699354-702674:-1
so has part: feature:702599-702674:-1:exon
so has part: feature:700721-700984:-1:exon
so has part: feature:700275-700550:-1:exon
so has part: feature:699761-700033:-1:exon
so has part: feature:699354-699646:-1:exon

XP_031950236.1
type: Protein
SIO_000068: ncbiprotein

position:699354:-1
position: 699354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702674:-1
position: 702674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702599-702674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700721-700984:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700275-700550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699761-700033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699354-699646:-1:exon

LOC116436901
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X1
translation: MAPALGAGMLLGLLGLLGAPGAATRGPPNLHIPPVLHSLRFLRVTVSEPSPGLPRFVAVGYVDGIPFASYNSRRGRVEPQTLWMAAGAEPGYWDTETEISERYQHVDPIDLEMLQRQYNQTRGLHTLQVVSGCDLLSNGSIRGSDRYGYDGRDFISFDLGSGSFVAADGTAQIIKRLWESDGITVPELKHELGHTCVEVLKKHVRYRREALERKEAPSVHVSGKVEHKILTLSCRTYRFYPSTIAVSWMKGDEIRDQETEWGGIVPNSDGTFHTWARMEARPEEWEQYRCRVEHPGMPEPGIFTWEPESSRNLILVVTVSITAIIIILLVRFSVWKLQSSNTLDGGQEGAQIHCVAFQESPTMGADPTVFPSGRARGMNTTQQPGSSSGGSPLCRSQDGSWG
SIO_010081: LOC116436901
subclass of: SO_0000673
so part of: LOC116436901
location: complement(join(699354..699646,699761..700033,700275..700550,700721..701011,702599..702674))
location: region:699354-702674:-1
so has part: feature:702599-702674:-1:exon
so has part: feature:700721-701011:-1:exon
so has part: feature:700275-700550:-1:exon
so has part: feature:699761-700033:-1:exon
so has part: feature:699354-699646:-1:exon

XP_031950235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:702599-702674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700721-701011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700275-700550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699761-700033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699354-699646:-1:exon

LOC116436901
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436901
product: class I histocompatibility antigen, F10 alpha chain-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 164 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032094346.1
SIO_010081: LOC116436901
subclass of: SO_0000673
so part of: LOC116436901
location: complement(join(699392..699570,699761..700033,700275..700550,700721..701011,702599..702695))
location: region:699392-702695:-1
so has part: feature:702599-702695:-1:exon
so has part: feature:700721-701011:-1:exon
so has part: feature:700275-700550:-1:exon
so has part: feature:699761-700033:-1:exon
so has part: feature:699392-699570:-1:exon

position:699392:-1
position: 699392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702599-702695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700721-701011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700275-700550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699761-700033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699392-699570:-1:exon

position:699570:-1
position: 699570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436901
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like isoform X3
translation: MAPALGAGMLLGLLGLLGAPGAATRGPPNLHIPPVLHSLRFLRVTVSEPSPGLPRFVAVGYVDGIPFASYNSRRGRVEPQTLWMAAGAEPGYWDTETEISERYQHVDPIDLEMLQRQYNQTRGLHTLQVVSGCDLLSNGSIRGSDRYGYDGRDFISFDLGSGSFVAADGTAQIIKRLWESDGITVPELKHELGHTCVEVLKKHVRYRREALERKEAPSVHVSGKVEHKILTLSCRTYRFYPSTIAVSWMKGDEIRDQETEWGGIVPNSDGTFHTWARMEARPEEWEQYRCRVEHPGMPEPGIFTWDLVSGSSNPVTHWMGVRKEHRSTVWRSRNPPPWVLIPLFFHRAEPEE
SIO_010081: LOC116436901
subclass of: SO_0000673
so part of: LOC116436901
location: complement(join(699428..699570,699761..700033,700275..700550,700721..701011,702599..702674))
location: region:699428-702674:-1
so has part: feature:702599-702674:-1:exon
so has part: feature:700721-701011:-1:exon
so has part: feature:700275-700550:-1:exon
so has part: feature:699761-700033:-1:exon
so has part: feature:699428-699570:-1:exon

XP_031950237.1
type: Protein
SIO_000068: ncbiprotein

position:699428:-1
position: 699428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702599-702674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700721-701011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700275-700550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699761-700033:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699428-699570:-1:exon

LOC116436912
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 706200..710329
location: region:706200-710329:1
so has part: feature:706200-710329:1:exon

116436912
type: Gene
SIO_000068: ncbigene

position:706200:1
position: 706200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710329:1
position: 710329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706200-710329:1:exon

LOC116436912
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436912
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116436912
subclass of: SO_0000673
so part of: LOC116436912
location: 706200..707221
location: region:706200-707221:1
so has part: feature:706200-707221:1:exon

position:707221:1
position: 707221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706200-707221:1:exon

LOC116436912
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436912
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116436912
subclass of: SO_0000673
so part of: LOC116436912
location: 707449..707527
location: region:707449-707527:1
so has part: feature:707449-707527:1:exon

position:707449:1
position: 707449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707527:1
position: 707527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707449-707527:1:exon

LOC116436912
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436912
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116436912
subclass of: SO_0000673
so part of: LOC116436912
location: 707714..710329
location: region:707714-710329:1
so has part: feature:707714-710329:1:exon

position:707714:1
position: 707714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707714-710329:1:exon

LOC116436866
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(725226..736606)
location: region:725226-736606:-1
so has part: feature:725226-736606:-1:exon

116436866
type: Gene
SIO_000068: ncbigene

position:725226:-1
position: 725226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736606:-1
position: 736606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725226-736606:-1:exon

LOC116436866
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436866
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 139 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436866
subclass of: SO_0000673
so part of: LOC116436866
location: complement(725226..726231)
location: region:725226-726231:-1
so has part: feature:725226-726231:-1:exon

position:726231:-1
position: 726231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725226-726231:-1:exon

LOC116436866
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436866
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 139 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436866
subclass of: SO_0000673
so part of: LOC116436866
location: complement(726417..726494)
location: region:726417-726494:-1
so has part: feature:726417-726494:-1:exon

position:726417:-1
position: 726417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726494:-1
position: 726494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726417-726494:-1:exon

LOC116436866
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436866
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 139 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436866
subclass of: SO_0000673
so part of: LOC116436866
location: complement(727144..727261)
location: region:727144-727261:-1
so has part: feature:727144-727261:-1:exon

position:727144:-1
position: 727144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727261:-1
position: 727261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727144-727261:-1:exon

LOC116436904
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 727377..731061
location: region:727377-731061:1
so has part: feature:727377-731061:1:exon
subclass of: SO_0000010

116436904
type: Gene
SIO_000068: ncbigene

position:727377:1
position: 727377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731061:1
position: 731061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727377-731061:1:exon

LOC116436904
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436904
product: zinc finger and SCAN domain-containing protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_032094351.1
SIO_010081: LOC116436904
subclass of: SO_0000673
so part of: LOC116436904
location: join(727377..727512,728437..728606,729186..731061)
location: region:727377-731061:1
so has part: feature:727377-727512:1:exon
so has part: feature:728437-728606:1:exon
so has part: feature:729186-731061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727377-727512:1:exon

position:727512:1
position: 727512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728437-728606:1:exon

position:728437:1
position: 728437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728606:1
position: 728606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:729186-731061:1:exon

position:729186:1
position: 729186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436904
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436904
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:730022..730024,aa:OTHER)
transl except: (pos:730091..730093,aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger and SCAN domain-containing protein 2-like
translation: MAQEFNEEEKPRKSHTRGGCKPSPWSSEQERPPMCREGGWSFSQSSELVVQQRLHNREKPYKCLECGKSFSQSYHLIRHRNIHTGEGLYRCRECGKTFSDVSTFAAHQRVHTGERPYKCGQCGKSFSQSSNLLTHQRLHTGERPFKCPDCRKSFVRRSDLVIHWRIHSGEKPYECPECGKRFRSSSVLIRHQQTHTEGRPYECPECGKRFRNSSHLIRHQWTHTGERPYECPECRKRFNQSFALIRHQRTHQXGKPYECRDCGKRLSQNSKLITHXHLHTQEWPYSCGECVKSSCLNYHQMIHTGERPYQCEECRKSFSDGSITHQCLHTKEWPYKCQECGKSFSISSYLICHQKAHSGEKPYRCPECGKRFQSISVLIRHQG
SIO_010081: LOC116436904
subclass of: SO_0000673
so part of: LOC116436904
location: 729266..730417
location: region:729266-730417:1
so has part: feature:729266-730417:1:exon

XP_031950242.1
type: Protein
SIO_000068: ncbiprotein

position:729266:1
position: 729266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730417:1
position: 730417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729266-730417:1:exon

LOC116436866
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436866
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 139 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436866
subclass of: SO_0000673
so part of: LOC116436866
location: complement(729488..729612)
location: region:729488-729612:-1
so has part: feature:729488-729612:-1:exon

position:729488:-1
position: 729488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729612:-1
position: 729612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729488-729612:-1:exon

LOC116436866
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436866
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 139 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436866
subclass of: SO_0000673
so part of: LOC116436866
location: complement(732313..732524)
location: region:732313-732524:-1
so has part: feature:732313-732524:-1:exon

position:732313:-1
position: 732313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732524:-1
position: 732524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:732313-732524:-1:exon

LOC116436866
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436866
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 139 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436866
subclass of: SO_0000673
so part of: LOC116436866
location: complement(734131..735103)
location: region:734131-735103:-1
so has part: feature:734131-735103:-1:exon

position:734131:-1
position: 734131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735103:-1
position: 735103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734131-735103:-1:exon

LOC116436866
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436866
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 139 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436866
subclass of: SO_0000673
so part of: LOC116436866
location: complement(735771..735849)
location: region:735771-735849:-1
so has part: feature:735771-735849:-1:exon

position:735771:-1
position: 735771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735849:-1
position: 735849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735771-735849:-1:exon

LOC116436866
type: Exon
subclass of: SO_0000147
RO_0002162: 1196302
gene: LOC116436866
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 139 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116436866
subclass of: SO_0000673
so part of: LOC116436866
location: complement(736065..736606)
location: region:736065-736606:-1
so has part: feature:736065-736606:-1:exon

position:736065:-1
position: 736065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736065-736606:-1:exon

LOC116436882
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(757113..761811)
location: region:757113-761811:-1
so has part: feature:757113-761811:-1:exon
subclass of: SO_0000010

116436882
type: Gene
SIO_000068: ncbigene

position:757113:-1
position: 757113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761811:-1
position: 761811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757113-761811:-1:exon

LOC116436882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436882
product: hydroperoxide isomerase ALOXE3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094306.1
SIO_010081: LOC116436882
subclass of: SO_0000673
so part of: LOC116436882
location: complement(join(757113..757659,757875..758045,758511..758611,758704..758825,758902..759071,759576..759662,759797..760000,760076..760398,760508..760611,760709..760831,760926..761007,761080..761278,761674..761811))
location: region:757113-761811:-1
so has part: feature:761674-761811:-1:exon
so has part: feature:761080-761278:-1:exon
so has part: feature:760926-761007:-1:exon
so has part: feature:760709-760831:-1:exon
so has part: feature:760508-760611:-1:exon
so has part: feature:760076-760398:-1:exon
so has part: feature:759797-760000:-1:exon
so has part: feature:759576-759662:-1:exon
so has part: feature:758902-759071:-1:exon
so has part: feature:758704-758825:-1:exon
so has part: feature:758511-758611:-1:exon
so has part: feature:757875-758045:-1:exon
so has part: feature:757113-757659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761674-761811:-1:exon

position:761674:-1
position: 761674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:761080-761278:-1:exon

position:761080:-1
position: 761080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761278:-1
position: 761278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:760926-761007:-1:exon

position:760926:-1
position: 760926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761007:-1
position: 761007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:760709-760831:-1:exon

position:760709:-1
position: 760709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760831:-1
position: 760831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:760508-760611:-1:exon

position:760508:-1
position: 760508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760611:-1
position: 760611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:760076-760398:-1:exon

position:760076:-1
position: 760076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760398:-1
position: 760398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:759797-760000:-1:exon

position:759797:-1
position: 759797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760000:-1
position: 760000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:759576-759662:-1:exon

position:759576:-1
position: 759576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759662:-1
position: 759662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:758902-759071:-1:exon

position:758902:-1
position: 758902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759071:-1
position: 759071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:758704-758825:-1:exon

position:758704:-1
position: 758704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758825:-1
position: 758825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:758511-758611:-1:exon

position:758511:-1
position: 758511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758611:-1
position: 758611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:757875-758045:-1:exon

position:757875:-1
position: 757875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758045:-1
position: 758045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:757113-757659:-1:exon

position:757659:-1
position: 757659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436882
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroperoxide isomerase ALOXE3-like
translation: MATYKVTVATGDMVEAGTNNSISITLVGSYGESRQTTVPFLFQPGKEKNLSVHCGQDLGPIVLIRLHKWRLFLEDAWFCKDVRVTAPNGTLYRFPCYQWLEGVTTVEVREGAGKKLVDDKLQILKEHRHRELAARQEAYRWKNFAQGWPRCLSVDSVFELDSNIQFSRIRATNFTGFLIFQGASHFLSGFLLRRTSWNSLDEMRTIFSRTQGRDIVPEYVAKHWQEDDFFGSQFLNGNNPIIIHRCTTLPPKFPVTPEMVAGSLGDGTDLGKELQEGRIFIVDYKVLEDIPADTIYGRQQYVAAPLCLLHQGTDGLLRPIAIQLSQTPGPCSPIFLPSDDEWDWLLAKTWVRNADFYSHQLLTHLLRTHLFGEVFAIATLRHLPTCHPLFKLLMPHFHFTLHINTLARSVLINPGGLIDKGSGVTYEGLLLVVQRGLEQVTYTSLCLPDDIRHRGMSHVPNYHYRDDAMRLWEAIESFVTGIVTFYYGGDAAVSGDTELQAWVMDIFTNGFLGRTSSGVPSSLQTVAELIKFLTMVMFTCSAQHAAVNNGQYDLGAFVPNAPSSMRHPPPCEKGRAFLQHFLDTIPEVATTANILVALILLSSQLKDRRLLGQYPEEWFTEAEPRRLIRAFQGQLEEIRDRIEERNHLAELRYNYLNPLETENSISI
SIO_010081: LOC116436882
subclass of: SO_0000673
so part of: LOC116436882
location: complement(join(757480..757659,757875..758045,758511..758611,758704..758825,758902..759071,759576..759662,759797..760000,760076..760398,760508..760611,760709..760831,760926..761007,761080..761278,761674..761811))
location: region:757480-761811:-1
so has part: feature:761674-761811:-1:exon
so has part: feature:761080-761278:-1:exon
so has part: feature:760926-761007:-1:exon
so has part: feature:760709-760831:-1:exon
so has part: feature:760508-760611:-1:exon
so has part: feature:760076-760398:-1:exon
so has part: feature:759797-760000:-1:exon
so has part: feature:759576-759662:-1:exon
so has part: feature:758902-759071:-1:exon
so has part: feature:758704-758825:-1:exon
so has part: feature:758511-758611:-1:exon
so has part: feature:757875-758045:-1:exon
so has part: feature:757480-757659:-1:exon

XP_031950197.1
type: Protein
SIO_000068: ncbiprotein

position:757480:-1
position: 757480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761674-761811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:761080-761278:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760926-761007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760709-760831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:760508-760611:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:760076-760398:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:759797-760000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:759576-759662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758902-759071:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758704-758825:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:758511-758611:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:757875-758045:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:757480-757659:-1:exon

LOC116436924
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 788290..837717
location: region:788290-837717:1
so has part: feature:788290-837717:1:exon
subclass of: SO_0000010

116436924
type: Gene
SIO_000068: ncbigene

position:788290:1
position: 788290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837717:1
position: 837717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788290-837717:1:exon

LOC116436924
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436924
product: zinc finger protein 70-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_032094378.1
SIO_010081: LOC116436924
subclass of: SO_0000673
so part of: LOC116436924
location: join(788290..788720,836603..837717)
location: region:788290-837717:1
so has part: feature:788290-788720:1:exon
so has part: feature:836603-837717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788290-788720:1:exon

position:788720:1
position: 788720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:836603-837717:1:exon

position:836603:1
position: 836603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436924
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436924
product: zinc finger protein 70-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032094379.1
SIO_010081: LOC116436924
subclass of: SO_0000673
so part of: LOC116436924
location: join(788290..788720,804654..804803,810280..811611)
location: region:788290-811611:1
so has part: feature:788290-788720:1:exon
so has part: feature:804654-804803:1:exon
so has part: feature:810280-811611:1:exon

position:811611:1
position: 811611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788290-788720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804654-804803:1:exon

position:804654:1
position: 804654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804803:1
position: 804803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:810280-811611:1:exon

position:810280:1
position: 810280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436924
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 70-like isoform X1
translation: MAARAGPVPGLFLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGRSPVRRRRSSEAAPAQDLSFPRRGQMEEEEKPRRCCTRRGCKHSPERCKEERAPLCREGGRRSRGSSELGEKPQGGEKPHKCLECGKSFSTSSSLIHPCKIHSGERPRECRECGKSFSQSMVLIEHQVIHTGEQLYTCTECGKSFGGSSILRKHRHTCTGERPCECPECGKSFVRCSSSIPRGRIGVG
SIO_010081: LOC116436924
subclass of: SO_0000673
so part of: LOC116436924
location: join(788394..788720,836603..837121)
location: region:788394-837121:1
so has part: feature:788394-788720:1:exon
so has part: feature:836603-837121:1:exon

XP_031950269.1
type: Protein
SIO_000068: ncbiprotein

position:788394:1
position: 788394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837121:1
position: 837121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788394-788720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836603-837121:1:exon

LOC116436924
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436924 isoform X2
translation: MAARAGPVPGLFLSCGFPLTQPGGRWERGAGLGRVQSPPLAPIGRCCRQSWFWRADWSERGAARARSRRQGGRGAAEAPLAERLCGPGSGGGGRSPVRRRRSSEAAPAQISGYFWCPTRDRSSEEDTLTDHRKKGDDDERQRYCGRRVLTASQRTSVRLITRPIWVPSRWTKPAPSPTVDKSGFSECVTN
SIO_010081: LOC116436924
subclass of: SO_0000673
so part of: LOC116436924
location: join(788394..788720,804654..804803,810280..810375)
location: region:788394-810375:1
so has part: feature:788394-788720:1:exon
so has part: feature:804654-804803:1:exon
so has part: feature:810280-810375:1:exon

XP_031950270.1
type: Protein
SIO_000068: ncbiprotein

position:810375:1
position: 810375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788394-788720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804654-804803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:810280-810375:1:exon

LOC116436944
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 831805..875572
location: region:831805-875572:1
so has part: feature:831805-875572:1:exon
subclass of: SO_0000010

116436944
type: Gene
SIO_000068: ncbigene

position:831805:1
position: 831805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875572:1
position: 875572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831805-875572:1:exon

LOC116436944
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436944
product: zinc finger protein 850-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 592 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094400.1
SIO_010081: LOC116436944
subclass of: SO_0000673
so part of: LOC116436944
location: join(831805..834028,835471..836305,840125..841500,846970..846972,858513..861111,870922..872649,874885..875572)
location: region:831805-875572:1
so has part: feature:831805-834028:1:exon
so has part: feature:835471-836305:1:exon
so has part: feature:840125-841500:1:exon
so has part: feature:846970-846972:1:exon
so has part: feature:858513-861111:1:exon
so has part: feature:870922-872649:1:exon
so has part: feature:874885-875572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:831805-834028:1:exon

position:834028:1
position: 834028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:835471-836305:1:exon

position:835471:1
position: 835471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836305:1
position: 836305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:840125-841500:1:exon

position:840125:1
position: 840125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841500:1
position: 841500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:846970-846972:1:exon

position:846970:1
position: 846970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846972:1
position: 846972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858513-861111:1:exon

position:858513:1
position: 858513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861111:1
position: 861111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:870922-872649:1:exon

position:870922:1
position: 870922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872649:1
position: 872649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:874885-875572:1:exon

position:874885:1
position: 874885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436944
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:859861..859863,aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 850-like
translation: MEEEEKPRRCRTRRGCKRSPERSKEERALLCREGGRRSRGSSELGEKPQAREKPQGGEKPYKCLECGKSFSQSSNLIRHQVIHTGEKPYTCLECGKSFSQSSHLVRHEVTHTGEKPYECGECGKSFGCNSDLNKHRKIHSGKRPYECGECGKSFSQSSNLIRHQTIHTGERPYKCLECGKSFRRNSSLNVHRRSHTGERPYECSECGKRFQTTTKLLQHQPTHTEERPFRCADCGKGFNRNSHLVSHRRMHTGEKPYECLECGKSFSTSSDLIQHQNIHTGERPYKCRECGKSFTWNSNLNKHLKIHTGERPYECVECGKRFRWRSHLISHQNIHTSKRERPYKCLECRKSFSNNSDLIKHQRIHTGERPYECGECGKSFSQSSNLIRHQTIHTRERPYRCLECGKGFNRNSHLIRHRRIHTGERPYECPKCGKSFSQSSQLTQHQRSHQGEKPYKCLECGKGFSQRSNLIRHQRIHTGEQPYECGKYGKSFSQSSALIQHQMIHTGERPYECRECGKSFSRSSDLIQHQMIHTGERPYECGECRKSFSRRSSLHSHQKIHTGERPYKCLECGKSFSQSSNLIKHSKIHTRESPYKCLECGKSFIRSCNLIKHCKIHTGELPYKCLECGKSFIRSSNLIKHCKIHTGESPYKCLECGKSFIRSSNLIKHRKIHTREQEQCYECLECGKSFCWSSQLIIHQRIHTGERPYECPECGKRFRSSSHLLKHQPIHTEERPFRCSDCGKGFKHSSTLFSHRRIHTGERPYECPQCGKRFRTSSHFFLHQAVHTGERPFRCPDCGKRFKQNSYLVIHRRIHTGERPYECPECGKRFRSSSHLLLHQPIHTGERPFRCPDCGKGFKQNSHLISHRRIHTGERPYECPQCGKSFSRSSHLTQHQRRHRXGKPCVCPEYGKSFVRCSSSIPDGRISIG
SIO_010081: LOC116436944
subclass of: SO_0000673
so part of: LOC116436944
location: join(840152..841500,846970..846972,858513..859950)
location: region:840152-859950:1
so has part: feature:840152-841500:1:exon
so has part: feature:846970-846972:1:exon
so has part: feature:858513-859950:1:exon

XP_031950291.1
type: Protein
SIO_000068: ncbiprotein

position:840152:1
position: 840152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859950:1
position: 859950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840152-841500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:846970-846972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:858513-859950:1:exon

LOC116436914
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 916065..917465
location: region:916065-917465:1
so has part: feature:916065-917465:1:exon
subclass of: SO_0000010

116436914
type: Gene
SIO_000068: ncbigene

position:916065:1
position: 916065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917465:1
position: 917465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916065-917465:1:exon

LOC116436914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436914
product: olfactory receptor 14J1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094362.1
SIO_010081: LOC116436914
subclass of: SO_0000673
so part of: LOC116436914
location: 916065..917465
location: region:916065-917465:1
so has part: feature:916065-917465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:916065-917465:1:exon

LOC116436914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 14J1-like
translation: MAEHNAWTQPMSNSSSISHFLLLALEHTRQLQLLHFCLFLGISLAALLGNGLIISAGACGQHLHSPIFFFLLSLALTDLGSICTTVPKAMHNSLWGTRHISYSGCAVQVFLFVFFMGVEVSLLTIMCYDRYVSICKALHYGTLLGSRACAHMAAAAWASAFLYALLHMANTFSLPLCQGNALGQFFCKVPQILKLSCSHYKLRELGLIAVSVCLLFGCFAFIVFSYVQIFRAVLRIPSEQGRHKAFSTCLSHLAVLCLFLSTAMFAHLKPPSISSPSLDAALSVLYSVVPLALNPLIYSLRNQELRDALRKMMTGFFQQQ
SIO_010081: LOC116436914
subclass of: SO_0000673
so part of: LOC116436914
location: 916282..917244
location: region:916282-917244:1
so has part: feature:916282-917244:1:exon

XP_031950253.1
type: Protein
SIO_000068: ncbiprotein

position:916282:1
position: 916282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917244:1
position: 917244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916282-917244:1:exon

LOC116436947
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 948573..955168
location: region:948573-955168:1
so has part: feature:948573-955168:1:exon
subclass of: SO_0000010

116436947
type: Gene
SIO_000068: ncbigene

position:948573:1
position: 948573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955168:1
position: 955168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948573-955168:1:exon

LOC116436947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436947
product: serine/threonine-protein kinase PAK 3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094403.1
SIO_010081: LOC116436947
subclass of: SO_0000673
so part of: LOC116436947
location: join(948573..948896,949868..949905,950358..950480,951270..951417,952116..952179,952783..952831,953130..953242,953499..953616,954359..954458,954740..954936,955029..955168)
location: region:948573-955168:1
so has part: feature:948573-948896:1:exon
so has part: feature:949868-949905:1:exon
so has part: feature:950358-950480:1:exon
so has part: feature:951270-951417:1:exon
so has part: feature:952116-952179:1:exon
so has part: feature:952783-952831:1:exon
so has part: feature:953130-953242:1:exon
so has part: feature:953499-953616:1:exon
so has part: feature:954359-954458:1:exon
so has part: feature:954740-954936:1:exon
so has part: feature:955029-955168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:948573-948896:1:exon

position:948896:1
position: 948896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:949868-949905:1:exon

position:949868:1
position: 949868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949905:1
position: 949905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:950358-950480:1:exon

position:950358:1
position: 950358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950480:1
position: 950480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:951270-951417:1:exon

position:951270:1
position: 951270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951417:1
position: 951417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:952116-952179:1:exon

position:952116:1
position: 952116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952179:1
position: 952179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:952783-952831:1:exon

position:952783:1
position: 952783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952831:1
position: 952831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:953130-953242:1:exon

position:953130:1
position: 953130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953242:1
position: 953242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:953499-953616:1:exon

position:953499:1
position: 953499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953616:1
position: 953616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:954359-954458:1:exon

position:954359:1
position: 954359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954458:1
position: 954458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:954740-954936:1:exon

position:954740:1
position: 954740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954936:1
position: 954936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:955029-955168:1:exon

position:955029:1
position: 955029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436947
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase PAK 3-like
translation: MIGQVCAAVCTVFSVAYSGYFLTHLTRHLTRGWRHARPLGSPAGSAPPLAPSLAEEEAEEEPNDKKPPSVVHPQPERAEPLSLDARSAVQRAAAPARSAAASTPPHASTSSSSPAQQLETREEQSLRRLRSIVSLGEPRRKYSAFEELGRGGFGAVYKALDASTGQQVAIKKVALQEEMSEELAVNEIVVMRDSRNPNIVTYLDSYLVDGELWLAMEFMDGGTLYDVLGAVYLEEGQIGAVCRECLQGLHFLHSRRVIHRDVKSCNILVSMDGSVKLADFGLCAQLTPERDKCSSSVGTPSWMAPEVVRGEAYGPKVDIWSLGIVGLEMVEGEAPYQREPRLRVLELIERNGAPKLQNPGTXSALLRDFLRCCLQTDEDRRWSAQELLR
SIO_010081: LOC116436947
subclass of: SO_0000673
so part of: LOC116436947
location: join(948818..948896,949868..949905,950358..950480,951270..951417,952116..952179,952783..952831,953130..953242,953499..953616,954359..954458,954740..954936,955029..955168)
location: region:948818-955168:1
so has part: feature:948818-948896:1:exon
so has part: feature:949868-949905:1:exon
so has part: feature:950358-950480:1:exon
so has part: feature:951270-951417:1:exon
so has part: feature:952116-952179:1:exon
so has part: feature:952783-952831:1:exon
so has part: feature:953130-953242:1:exon
so has part: feature:953499-953616:1:exon
so has part: feature:954359-954458:1:exon
so has part: feature:954740-954936:1:exon
so has part: feature:955029-955168:1:exon

XP_031950294.1
type: Protein
SIO_000068: ncbiprotein

position:948818:1
position: 948818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948818-948896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949868-949905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950358-950480:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:951270-951417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:952116-952179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:952783-952831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:953130-953242:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:953499-953616:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954359-954458:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:954740-954936:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:955029-955168:1:exon

LOC116436946
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436946
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 957582..964544
location: region:957582-964544:1
so has part: feature:957582-964544:1:exon
subclass of: SO_0000010

116436946
type: Gene
SIO_000068: ncbigene

position:957582:1
position: 957582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964544:1
position: 964544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957582-964544:1:exon

LOC116436946
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436946
product: serine/threonine-protein kinase PAK 3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094401.1
SIO_010081: LOC116436946
subclass of: SO_0000673
so part of: LOC116436946
location: join(957582..957902,958874..958911,959365..959487,960277..960424,961123..961186,961790..961838,962137..962249,962506..962623,963368..963466,963746..963942,964035..964173,964410..964544)
location: region:957582-964544:1
so has part: feature:957582-957902:1:exon
so has part: feature:958874-958911:1:exon
so has part: feature:959365-959487:1:exon
so has part: feature:960277-960424:1:exon
so has part: feature:961123-961186:1:exon
so has part: feature:961790-961838:1:exon
so has part: feature:962137-962249:1:exon
so has part: feature:962506-962623:1:exon
so has part: feature:963368-963466:1:exon
so has part: feature:963746-963942:1:exon
so has part: feature:964035-964173:1:exon
so has part: feature:964410-964544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:957582-957902:1:exon

position:957902:1
position: 957902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:958874-958911:1:exon

position:958874:1
position: 958874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958911:1
position: 958911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:959365-959487:1:exon

position:959365:1
position: 959365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959487:1
position: 959487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:960277-960424:1:exon

position:960277:1
position: 960277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960424:1
position: 960424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:961123-961186:1:exon

position:961123:1
position: 961123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961186:1
position: 961186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:961790-961838:1:exon

position:961790:1
position: 961790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961838:1
position: 961838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:962137-962249:1:exon

position:962137:1
position: 962137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962249:1
position: 962249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:962506-962623:1:exon

position:962506:1
position: 962506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962623:1
position: 962623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:963368-963466:1:exon

position:963368:1
position: 963368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963466:1
position: 963466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:963746-963942:1:exon

position:963746:1
position: 963746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963942:1
position: 963942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:964035-964173:1:exon

position:964035:1
position: 964035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964173:1
position: 964173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:964410-964544:1:exon

position:964410:1
position: 964410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436946
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436946
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase PAK 3-like
translation: MIGQVCAAVCTVFSVAYSGYFLTHLTRHLTRGWRHARPLGSPAGSAPPLAPSLAEEEAEEEPNDKKPPSVVHPQPERAEPLSLDARSAVQRAAAPARSAAASTPPHASTSSSSPAQQLETREEQSLRRLRSIVSLGEPRRKYSAFEELGRGGFGAVYKALDASTGQQVAIKKVALQEEMSEELAVNEIVVMRDSRNPNIVTYLDSYLVDGELWLAMEFMDGGTLYDVLGAVYLEEGQIGAVCRECLQGLHFLHSRRVIHRDVKSCNILVXMDGSVKLADFGLCAQLTPERDKCSSSVGTPSWMAPEVVRGEAYGPKVDIWSLGIVGLEMVEGEAPYQREPRLRVLELIERNGAPKLQNPRHHSALLRDFLRCCLQTDEDRRWSAQELLKHPFVTSGDPASSLAALIISAKQVQEDWRGDACA
SIO_010081: LOC116436946
subclass of: SO_0000673
so part of: LOC116436946
location: join(957824..957902,958874..958911,959365..959487,960277..960424,961123..961186,961790..961838,962137..962249,962506..962623,963368..963466,963746..963942,964035..964173,964410..964511)
location: region:957824-964511:1
so has part: feature:957824-957902:1:exon
so has part: feature:958874-958911:1:exon
so has part: feature:959365-959487:1:exon
so has part: feature:960277-960424:1:exon
so has part: feature:961123-961186:1:exon
so has part: feature:961790-961838:1:exon
so has part: feature:962137-962249:1:exon
so has part: feature:962506-962623:1:exon
so has part: feature:963368-963466:1:exon
so has part: feature:963746-963942:1:exon
so has part: feature:964035-964173:1:exon
so has part: feature:964410-964511:1:exon

XP_031950292.1
type: Protein
SIO_000068: ncbiprotein

position:957824:1
position: 957824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964511:1
position: 964511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:957824-957902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958874-958911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959365-959487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960277-960424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961123-961186:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:961790-961838:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962137-962249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962506-962623:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963368-963466:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963746-963942:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:964035-964173:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:964410-964511:1:exon

LOC116436867
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 968109..971992
location: region:968109-971992:1
so has part: feature:968109-971992:1:exon
subclass of: SO_0000010

116436867
type: Gene
SIO_000068: ncbigene

position:968109:1
position: 968109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971992:1
position: 971992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968109-971992:1:exon

LOC116436867
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436867
product: serine/threonine-protein kinase PAK 3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094285.1
SIO_010081: LOC116436867
subclass of: SO_0000673
so part of: LOC116436867
location: join(968109..968135,968212..968487,969276..969422,970115..970178,970781..970829,971130..971242,971499..971992)
location: region:968109-971992:1
so has part: feature:968109-968135:1:exon
so has part: feature:968212-968487:1:exon
so has part: feature:969276-969422:1:exon
so has part: feature:970115-970178:1:exon
so has part: feature:970781-970829:1:exon
so has part: feature:971130-971242:1:exon
so has part: feature:971499-971992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:968109-968135:1:exon

position:968135:1
position: 968135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:968212-968487:1:exon

position:968212:1
position: 968212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968487:1
position: 968487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:969276-969422:1:exon

position:969276:1
position: 969276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969422:1
position: 969422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:970115-970178:1:exon

position:970115:1
position: 970115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970178:1
position: 970178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:970781-970829:1:exon

position:970781:1
position: 970781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970829:1
position: 970829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:971130-971242:1:exon

position:971130:1
position: 971130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971242:1
position: 971242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:971499-971992:1:exon

position:971499:1
position: 971499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436867
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436867
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase PAK 3-like
translation: MKGKCGRPKRVNFTTQNPTLIKVSDFPLVWVKRNQLPELTRKQLLKDWLLPVPLTAVCLQGSPAGSAPPLAPSLAEEEAEEEPNDKKPPSVVHPQPERAEPLSLDARSAVQRAAAPARSAAASTPPXCSTSSSSPAQQLETREEQSLRRLRSIVSLGEPRRKYSAFEELGRGGFGAVYKALDASTGQQVAIKKVALQEEMSEELAVNEIVVMRDSRNPNIVTYLDSYLVDGELWLAMEFMDGGTLYDVLGAVYLEEGQIGAVCREVRDATCASPGLHRMALVNWWLRTAEISCSRPCFAVAVTTRRRKSI
SIO_010081: LOC116436867
subclass of: SO_0000673
so part of: LOC116436867
location: join(968109..968135,968212..968487,969276..969422,970115..970178,970781..970829,971130..971242,971499..971754)
location: region:968109-971754:1
so has part: feature:968109-968135:1:exon
so has part: feature:968212-968487:1:exon
so has part: feature:969276-969422:1:exon
so has part: feature:970115-970178:1:exon
so has part: feature:970781-970829:1:exon
so has part: feature:971130-971242:1:exon
so has part: feature:971499-971754:1:exon

XP_031950176.1
type: Protein
SIO_000068: ncbiprotein

position:971754:1
position: 971754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968109-968135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:968212-968487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969276-969422:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:970115-970178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970781-970829:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971130-971242:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971499-971754:1:exon

LOC116436933
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 974891..984591
location: region:974891-984591:1
so has part: feature:974891-984591:1:exon
subclass of: SO_0000010

116436933
type: Gene
SIO_000068: ncbigene

position:974891:1
position: 974891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984591:1
position: 984591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974891-984591:1:exon

LOC116436933
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436933
product: zinc finger protein 23-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032094389.1
SIO_010081: LOC116436933
subclass of: SO_0000673
so part of: LOC116436933
location: join(974891..975096,982947..984591)
location: region:974891-984591:1
so has part: feature:974891-975096:1:exon
so has part: feature:982947-984591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:974891-975096:1:exon

position:975096:1
position: 975096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982947-984591:1:exon

position:982947:1
position: 982947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436933
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436933
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:983629..983631,aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 23-like
translation: MEEEEKPWRCRTRRGCKRSPERSKEERAPLCREGGRRSRGSLELGEKAQGGEKPHKCLECGMGFRWSSSLIRHQRIHTGERPYECGECGKGFSSISNLIRHQVVHTGEQPYECLDCWKSFRHSSTLRKHQRTHTGERPYECSECGKRFPTSSQLLEHQRIHTDERPFRCPDCGKGFKRNSNLISHQRIHTGERPYECPECGKSFSQQSNLTKHQQRHRXGKPCECPECGKSFVRCSSSIPRGRIGVG
SIO_010081: LOC116436933
subclass of: SO_0000673
so part of: LOC116436933
location: 982974..983718
location: region:982974-983718:1
so has part: feature:982974-983718:1:exon

XP_031950280.1
type: Protein
SIO_000068: ncbiprotein

position:982974:1
position: 982974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983718:1
position: 983718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982974-983718:1:exon

LOC116436920
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(988430..993472)
location: region:988430-993472:-1
so has part: feature:988430-993472:-1:exon
subclass of: SO_0000010

116436920
type: Gene
SIO_000068: ncbigene

position:988430:-1
position: 988430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993472:-1
position: 993472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988430-993472:-1:exon

LOC116436920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436920
product: early activation antigen CD69-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032094371.1
SIO_010081: LOC116436920
subclass of: SO_0000673
so part of: LOC116436920
location: complement(join(988430..989078,989475..989665,989770..989863,991671..992488,993313..993472))
location: region:988430-993472:-1
so has part: feature:993313-993472:-1:exon
so has part: feature:991671-992488:-1:exon
so has part: feature:989770-989863:-1:exon
so has part: feature:989475-989665:-1:exon
so has part: feature:988430-989078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:993313-993472:-1:exon

position:993313:-1
position: 993313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:991671-992488:-1:exon

position:991671:-1
position: 991671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992488:-1
position: 992488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:989770-989863:-1:exon

position:989770:-1
position: 989770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989863:-1
position: 989863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:989475-989665:-1:exon

position:989475:-1
position: 989475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989665:-1
position: 989665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:988430-989078:-1:exon

position:989078:-1
position: 989078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436920
product: early activation antigen CD69-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032094369.1
SIO_010081: LOC116436920
subclass of: SO_0000673
so part of: LOC116436920
location: complement(join(988430..989078,989171..989270,989475..989665,989770..989863,991671..992488,993313..993472))
location: region:988430-993472:-1
so has part: feature:993313-993472:-1:exon
so has part: feature:991671-992488:-1:exon
so has part: feature:989770-989863:-1:exon
so has part: feature:989475-989665:-1:exon
so has part: feature:989171-989270:-1:exon
so has part: feature:988430-989078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:993313-993472:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991671-992488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989770-989863:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989475-989665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:989171-989270:-1:exon

position:989171:-1
position: 989171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989270:-1
position: 989270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:988430-989078:-1:exon

LOC116436920
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436920
product: early activation antigen CD69-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_032094370.1
SIO_010081: LOC116436920
subclass of: SO_0000673
so part of: LOC116436920
location: complement(join(988430..989078,989171..989270,989475..989665,989770..989863,990094..991653))
location: region:988430-991653:-1
so has part: feature:990094-991653:-1:exon
so has part: feature:989770-989863:-1:exon
so has part: feature:989475-989665:-1:exon
so has part: feature:989171-989270:-1:exon
so has part: feature:988430-989078:-1:exon

position:991653:-1
position: 991653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990094-991653:-1:exon

position:990094:-1
position: 990094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:989770-989863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989475-989665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989171-989270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988430-989078:-1:exon

LOC116436920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436920 isoform X1
translation: MGSFRRHSSSVAVRNGAEESWFEGTATTAEPRVSGSDPIPVTLLVLLLLVLLLALGVALAVQSGSCGKTPVTPVAPVAPVLLACPKGWVGYRGVCDFLSRDQGTWGQGQARCSELGASLAVLKDEEMEFPFPSVGAHIPASGCADGARGCPGGTAAASTPRSRSWAMQSVRSLERVNSGAGPAQIRGRISAAGPKLPRDRGCREDLLPAGQAQLRLFPPSTGMSFLSRSVCLALALRVTSVPLCRVTSVPGLQEMKLQEEEMMWKLMCGCLGCGWGFLAPSWTIPELILFL
SIO_010081: LOC116436920
subclass of: SO_0000673
so part of: LOC116436920
location: complement(join(988684..989078,989171..989270,989475..989665,989770..989863,991671..991766))
location: region:988684-991766:-1
so has part: feature:991671-991766:-1:exon
so has part: feature:989770-989863:-1:exon
so has part: feature:989475-989665:-1:exon
so has part: feature:989171-989270:-1:exon
so has part: feature:988684-989078:-1:exon

XP_031950260.1
type: Protein
SIO_000068: ncbiprotein

position:988684:-1
position: 988684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991766:-1
position: 991766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991671-991766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989770-989863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989475-989665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989171-989270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988684-989078:-1:exon

LOC116436920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436920 isoform X2
translation: MKPWIPRPHQEPGTSRKEPLEDFWVSGSDPIPVTLLVLLLLVLLLALGVALAVQSGSCGKTPVTPVAPVAPVLLACPKGWVGYRGVCDFLSRDQGTWGQGQARCSELGASLAVLKDEEMEFPFPSVGAHIPASGCADGARGCPGGTAAASTPRSRSWAMQSVRSLERVNSGAGPAQIRGRISAAGPKLPRDRGCREDLLPAGQAQLRLFPPSTGMSFLSRSVCLALALRVTSVPLCRVTSVPGLQEMKLQEEEMMWKLMCGCLGCGWGFLAPSWTIPELILFL
SIO_010081: LOC116436920
subclass of: SO_0000673
so part of: LOC116436920
location: complement(join(988684..989078,989171..989270,989475..989665,989770..989863,990094..990165))
location: region:988684-990165:-1
so has part: feature:990094-990165:-1:exon
so has part: feature:989770-989863:-1:exon
so has part: feature:989475-989665:-1:exon
so has part: feature:989171-989270:-1:exon
so has part: feature:988684-989078:-1:exon

XP_031950261.1
type: Protein
SIO_000068: ncbiprotein

position:990165:-1
position: 990165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990094-990165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989770-989863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989475-989665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989171-989270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988684-989078:-1:exon

LOC116436920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436920
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: early activation antigen CD69-like isoform X3
translation: MGSFRRHSSSVAVRNGAEESWFEGTATTAEPRVSGSDPIPVTLLVLLLLVLLLALGVALAVQSGSCGKTPVTPVAPVAPVLLACPKGWVGYRGVCDFLSRDQGTWGQGQARCSELGASLAVLKDEEMGRGPGRCRVCVPWRG
SIO_010081: LOC116436920
subclass of: SO_0000673
so part of: LOC116436920
location: complement(join(989031..989078,989475..989665,989770..989863,991671..991766))
location: region:989031-991766:-1
so has part: feature:991671-991766:-1:exon
so has part: feature:989770-989863:-1:exon
so has part: feature:989475-989665:-1:exon
so has part: feature:989031-989078:-1:exon

XP_031950262.1
type: Protein
SIO_000068: ncbiprotein

position:989031:-1
position: 989031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:991671-991766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989770-989863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989475-989665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:989031-989078:-1:exon

LOC116436931
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436931
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1002105..1002107,aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 79-like
translation: MEEEEKPRRCRTRRGCKRSPERSKEERAPLCREGGQRSRGSSELGEKPQGGEKPHKYLECGMGFRWSSSLIRHQRIHTGERPYECGECGKGFSSISNLIRHQVVHTGEQPYECLDCWKSFRHSSTLRVHQLTHTGERPYECSECGKRFPTSSQLLEHQRIHTDERPFRCPDCGKGFKRNSNLISHQRIHTGERPYECPRCGKSFSQSSTLTKHHRRHRXGKPCECPECGKSFVRCSSSIPRGRIGVG
SIO_010081: LOC116436931
subclass of: SO_0000673
so part of: LOC116436931
location: 1001451..1002194
location: region:1001451-1002194:1
so has part: feature:1001451-1002194:1:exon

XP_031950279.1
type: Protein
SIO_000068: ncbiprotein

position:1001451:1
position: 1001451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002194:1
position: 1002194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001451-1002194:1:exon

LOC116436921
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1006774..1010444)
location: region:1006774-1010444:-1
so has part: feature:1006774-1010444:-1:exon
subclass of: SO_0000010

116436921
type: Gene
SIO_000068: ncbigene

position:1006774:-1
position: 1006774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010444:-1
position: 1010444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006774-1010444:-1:exon

LOC116436921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436921
product: early activation antigen CD69-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032094373.1
SIO_010081: LOC116436921
subclass of: SO_0000673
so part of: LOC116436921
location: complement(join(1006774..1007422,1007515..1007614,1007819..1008009,1008114..1008201,1010008..1010444))
location: region:1006774-1010444:-1
so has part: feature:1010008-1010444:-1:exon
so has part: feature:1008114-1008201:-1:exon
so has part: feature:1007819-1008009:-1:exon
so has part: feature:1007515-1007614:-1:exon
so has part: feature:1006774-1007422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010008-1010444:-1:exon

position:1010008:-1
position: 1010008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1008114-1008201:-1:exon

position:1008114:-1
position: 1008114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008201:-1
position: 1008201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1007819-1008009:-1:exon

position:1007819:-1
position: 1007819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008009:-1
position: 1008009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1007515-1007614:-1:exon

position:1007515:-1
position: 1007515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007614:-1
position: 1007614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1006774-1007422:-1:exon

position:1007422:-1
position: 1007422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436921
product: early activation antigen CD69-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032094376.1
SIO_010081: LOC116436921
subclass of: SO_0000673
so part of: LOC116436921
location: complement(join(1006774..1007422,1007819..1008012,1008114..1008201,1010008..1010444))
location: region:1006774-1010444:-1
so has part: feature:1010008-1010444:-1:exon
so has part: feature:1008114-1008201:-1:exon
so has part: feature:1007819-1008012:-1:exon
so has part: feature:1006774-1007422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010008-1010444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008114-1008201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007819-1008012:-1:exon

position:1008012:-1
position: 1008012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1006774-1007422:-1:exon

LOC116436921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436921
product: early activation antigen CD69-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032094372.1
SIO_010081: LOC116436921
subclass of: SO_0000673
so part of: LOC116436921
location: complement(join(1006774..1007422,1007515..1007614,1007819..1008012,1008114..1008201,1010008..1010444))
location: region:1006774-1010444:-1
so has part: feature:1010008-1010444:-1:exon
so has part: feature:1008114-1008201:-1:exon
so has part: feature:1007819-1008012:-1:exon
so has part: feature:1007515-1007614:-1:exon
so has part: feature:1006774-1007422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010008-1010444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008114-1008201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007819-1008012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007515-1007614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006774-1007422:-1:exon

LOC116436921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436921
product: early activation antigen CD69-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032094375.1
SIO_010081: LOC116436921
subclass of: SO_0000673
so part of: LOC116436921
location: complement(join(1006774..1007422,1007515..1007614,1007819..1008012,1008114..1008201,1008431..1008702,1010008..1010444))
location: region:1006774-1010444:-1
so has part: feature:1010008-1010444:-1:exon
so has part: feature:1008431-1008702:-1:exon
so has part: feature:1008114-1008201:-1:exon
so has part: feature:1007819-1008012:-1:exon
so has part: feature:1007515-1007614:-1:exon
so has part: feature:1006774-1007422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010008-1010444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008431-1008702:-1:exon

position:1008431:-1
position: 1008431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008702:-1
position: 1008702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1008114-1008201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007819-1008012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007515-1007614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006774-1007422:-1:exon

LOC116436921
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436921
product: early activation antigen CD69-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032094374.1
SIO_010081: LOC116436921
subclass of: SO_0000673
so part of: LOC116436921
location: complement(join(1006774..1007422,1007515..1007614,1007819..1008012,1008114..1008201,1008431..1008972,1010008..1010444))
location: region:1006774-1010444:-1
so has part: feature:1010008-1010444:-1:exon
so has part: feature:1008431-1008972:-1:exon
so has part: feature:1008114-1008201:-1:exon
so has part: feature:1007819-1008012:-1:exon
so has part: feature:1007515-1007614:-1:exon
so has part: feature:1006774-1007422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010008-1010444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008431-1008972:-1:exon

position:1008972:-1
position: 1008972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1008114-1008201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007819-1008012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007515-1007614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006774-1007422:-1:exon

LOC116436921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436921 isoform X2
translation: MGSFRRHSSSVAVRNGAEESWFEGTATTAEPRVSGSDPIPVTLLVLLLLLLALGAALAVQSGSCGKTPVTPVAPVAPVLLACPKGWVGYRGVCDFLSRDQGTWGQGQARCSELGASLAVLKDEEMEFPFPSVGAHIPASGCADGARGCPGGTAAASTPRSRSWAMQSVRSLERVNSGAGPAQIRGRISAAGPKLPRDRGCREDLPSAGQAQLPLFPPSTGMSFLSRSVCLALALRVTSVPLCRVTSVPGLQEMKLQEEEMMWKLMCGCLGWGWGFLAPSWTIPELILFL
SIO_010081: LOC116436921
subclass of: SO_0000673
so part of: LOC116436921
location: complement(join(1007028..1007422,1007515..1007614,1007819..1008009,1008114..1008201,1010008..1010103))
location: region:1007028-1010103:-1
so has part: feature:1010008-1010103:-1:exon
so has part: feature:1008114-1008201:-1:exon
so has part: feature:1007819-1008009:-1:exon
so has part: feature:1007515-1007614:-1:exon
so has part: feature:1007028-1007422:-1:exon

XP_031950264.1
type: Protein
SIO_000068: ncbiprotein

position:1007028:-1
position: 1007028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010103:-1
position: 1010103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010008-1010103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008114-1008201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007819-1008009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007515-1007614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007028-1007422:-1:exon

LOC116436921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436921 isoform X1
translation: MGSFRRHSSSVAVRNGAEESWFEGTATTAEPRVSGSDPIPVTLLVLLLLLLALGAALAVQSAGSCGKTPVTPVAPVAPVLLACPKGWVGYRGVCDFLSRDQGTWGQGQARCSELGASLAVLKDEEMEFPFPSVGAHIPASGCADGARGCPGGTAAASTPRSRSWAMQSVRSLERVNSGAGPAQIRGRISAAGPKLPRDRGCREDLPSAGQAQLPLFPPSTGMSFLSRSVCLALALRVTSVPLCRVTSVPGLQEMKLQEEEMMWKLMCGCLGWGWGFLAPSWTIPELILFL
SIO_010081: LOC116436921
subclass of: SO_0000673
so part of: LOC116436921
location: complement(join(1007028..1007422,1007515..1007614,1007819..1008012,1008114..1008201,1010008..1010103))
location: region:1007028-1010103:-1
so has part: feature:1010008-1010103:-1:exon
so has part: feature:1008114-1008201:-1:exon
so has part: feature:1007819-1008012:-1:exon
so has part: feature:1007515-1007614:-1:exon
so has part: feature:1007028-1007422:-1:exon

XP_031950263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1010008-1010103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008114-1008201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007819-1008012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007515-1007614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007028-1007422:-1:exon

LOC116436921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436921 isoform X3
translation: MKPWIPRPHQEPASSRKEPSEDFWVSGSDPIPVTLLVLLLLLLALGAALAVQSAGSCGKTPVTPVAPVAPVLLACPKGWVGYRGVCDFLSRDQGTWGQGQARCSELGASLAVLKDEEMEFPFPSVGAHIPASGCADGARGCPGGTAAASTPRSRSWAMQSVRSLERVNSGAGPAQIRGRISAAGPKLPRDRGCREDLPSAGQAQLPLFPPSTGMSFLSRSVCLALALRVTSVPLCRVTSVPGLQEMKLQEEEMMWKLMCGCLGWGWGFLAPSWTIPELILFL
SIO_010081: LOC116436921
subclass of: SO_0000673
so part of: LOC116436921
location: complement(join(1007028..1007422,1007515..1007614,1007819..1008012,1008114..1008201,1008431..1008502))
location: region:1007028-1008502:-1
so has part: feature:1008431-1008502:-1:exon
so has part: feature:1008114-1008201:-1:exon
so has part: feature:1007819-1008012:-1:exon
so has part: feature:1007515-1007614:-1:exon
so has part: feature:1007028-1007422:-1:exon

XP_031950265.1
type: Protein
SIO_000068: ncbiprotein

position:1008502:-1
position: 1008502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1008431-1008502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008114-1008201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007819-1008012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007515-1007614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007028-1007422:-1:exon

LOC116436921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436921 isoform X3
translation: MKPWIPRPHQEPASSRKEPSEDFWVSGSDPIPVTLLVLLLLLLALGAALAVQSAGSCGKTPVTPVAPVAPVLLACPKGWVGYRGVCDFLSRDQGTWGQGQARCSELGASLAVLKDEEMEFPFPSVGAHIPASGCADGARGCPGGTAAASTPRSRSWAMQSVRSLERVNSGAGPAQIRGRISAAGPKLPRDRGCREDLPSAGQAQLPLFPPSTGMSFLSRSVCLALALRVTSVPLCRVTSVPGLQEMKLQEEEMMWKLMCGCLGWGWGFLAPSWTIPELILFL
SIO_010081: LOC116436921
subclass of: SO_0000673
so part of: LOC116436921
location: complement(join(1007028..1007422,1007515..1007614,1007819..1008012,1008114..1008201,1008431..1008502))
location: region:1007028-1008502:-1
so has part: feature:1008431-1008502:-1:exon
so has part: feature:1008114-1008201:-1:exon
so has part: feature:1007819-1008012:-1:exon
so has part: feature:1007515-1007614:-1:exon
so has part: feature:1007028-1007422:-1:exon

XP_031950266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1008431-1008502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008114-1008201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007819-1008012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007515-1007614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1007028-1007422:-1:exon

LOC116436921
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: early activation antigen CD69-like isoform X4
translation: MGSFRRHSSSVAVRNGAEESWFEGTATTAEPRVSGSDPIPVTLLVLLLLLLALGAALAVQSAGSCGKTPVTPVAPVAPVLLACPKGWVGYRGVCDFLSRDQGTWGQGQARCSELGASLAVLKDEEMGRGPGRCRVCVPWRG
SIO_010081: LOC116436921
subclass of: SO_0000673
so part of: LOC116436921
location: complement(join(1007375..1007422,1007819..1008012,1008114..1008201,1010008..1010103))
location: region:1007375-1010103:-1
so has part: feature:1010008-1010103:-1:exon
so has part: feature:1008114-1008201:-1:exon
so has part: feature:1007819-1008012:-1:exon
so has part: feature:1007375-1007422:-1:exon

XP_031950267.1
type: Protein
SIO_000068: ncbiprotein

position:1007375:-1
position: 1007375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010008-1010103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008114-1008201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007819-1008012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007375-1007422:-1:exon

LOC116436929
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1010448..1013053)
location: region:1010448-1013053:-1
so has part: feature:1010448-1013053:-1:exon
subclass of: SO_0000010

116436929
type: Gene
SIO_000068: ncbigene

position:1010448:-1
position: 1010448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013053:-1
position: 1013053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010448-1013053:-1:exon

LOC116436929
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436929
product: uncharacterized LOC116436929
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_032094386.1
SIO_010081: LOC116436929
subclass of: SO_0000673
so part of: LOC116436929
location: complement(join(1010448..1010825,1011649..1013053))
location: region:1010448-1013053:-1
so has part: feature:1011649-1013053:-1:exon
so has part: feature:1010448-1010825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1011649-1013053:-1:exon

position:1011649:-1
position: 1011649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1010448-1010825:-1:exon

position:1010825:-1
position: 1010825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436929
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436929
translation: MTGSNGDHVGGNWDPIGSDLEHTGSDRDHTGGDWEQPLRRRRSSEAAPAQVGAALGSGGARGWLRAEGAAGGCGGFVVPCGRRVRPGVRALRERLPAVSFPLLPRQEPVPEQRWLVPAAVGRTEVAAPSADAALGPPPSSAAASPGSGRRRRSRARTDAPPMAPLLRHGRPAGGSGPGLLPAPTNQRARTTTDGSTAQSERGAGSAHGTEPPPFPRTPPFLGNLGCGLFLALGPARAGGHGAAAALNRPELRVTGAECAGNCGSLE
SIO_010081: LOC116436929
subclass of: SO_0000673
so part of: LOC116436929
location: complement(join(1010813..1010825,1011649..1012436))
location: region:1010813-1012436:-1
so has part: feature:1011649-1012436:-1:exon
so has part: feature:1010813-1010825:-1:exon

XP_031950277.1
type: Protein
SIO_000068: ncbiprotein

position:1010813:-1
position: 1010813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012436:-1
position: 1012436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011649-1012436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1010813-1010825:-1:exon

LOC116436894
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1013602..1024774
location: region:1013602-1024774:1
so has part: feature:1013602-1024774:1:exon
subclass of: SO_0000010

116436894
type: Gene
SIO_000068: ncbigene

position:1013602:1
position: 1013602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024774:1
position: 1024774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013602-1024774:1:exon

LOC116436894
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436894
product: class I histocompatibility antigen, F10 alpha chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 144 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_032094336.1
SIO_010081: LOC116436894
subclass of: SO_0000673
so part of: LOC116436894
location: join(1013602..1013789,1016388..1016831,1018488..1018751,1022720..1022995,1023214..1023486,1023588..1023695,1023800..1023835,1023955..1023987,1024694..1024774)
location: region:1013602-1024774:1
so has part: feature:1013602-1013789:1:exon
so has part: feature:1016388-1016831:1:exon
so has part: feature:1018488-1018751:1:exon
so has part: feature:1022720-1022995:1:exon
so has part: feature:1023214-1023486:1:exon
so has part: feature:1023588-1023695:1:exon
so has part: feature:1023800-1023835:1:exon
so has part: feature:1023955-1023987:1:exon
so has part: feature:1024694-1024774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1013602-1013789:1:exon

position:1013789:1
position: 1013789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1016388-1016831:1:exon

position:1016388:1
position: 1016388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016831:1
position: 1016831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1018488-1018751:1:exon

position:1018488:1
position: 1018488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018751:1
position: 1018751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1022720-1022995:1:exon

position:1022720:1
position: 1022720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022995:1
position: 1022995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1023214-1023486:1:exon

position:1023214:1
position: 1023214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023486:1
position: 1023486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1023588-1023695:1:exon

position:1023588:1
position: 1023588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023695:1
position: 1023695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1023800-1023835:1:exon

position:1023800:1
position: 1023800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023835:1
position: 1023835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1023955-1023987:1:exon

position:1023955:1
position: 1023955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023987:1
position: 1023987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1024694-1024774:1:exon

position:1024694:1
position: 1024694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436960
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436960
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1013617..1014745)
location: region:1013617-1014745:-1
so has part: feature:1013617-1014745:-1:exon
subclass of: SO_0000011

116436960
type: Gene
SIO_000068: ncbigene

position:1013617:-1
position: 1013617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014745:-1
position: 1014745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013617-1014745:-1:exon

LOC116436960
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436960
product: uncharacterized LOC116436960
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004237129.1
SIO_010081: LOC116436960
subclass of: SO_0000673
so part of: LOC116436960
location: complement(join(1013617..1013857,1014678..1014745))
location: region:1013617-1014745:-1
so has part: feature:1014678-1014745:-1:exon
so has part: feature:1013617-1013857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1014678-1014745:-1:exon

position:1014678:-1
position: 1014678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1013617-1013857:-1:exon

position:1013857:-1
position: 1013857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436894
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class I histocompatibility antigen, F10 alpha chain-like
translation: MAPALGLGVLLGLLGLLGAPAEATKVLHSRRFLKGGPRGSQGVPEGSRGVAAGIQWDPDEFPGNPLSPAPPLPPLPRSLGLLRFRVPTCETAICPVTNDVTWGSGRHWPAGNSGANGGAGGGAGGGARAGGGARAGAGPGLGPERSSAMAPAPALGALLGLLGLLGTPGRATKVLHSLRYLHVAVSEPGPGVPQYTIMGFLDGIPFTRYDSERGRMEPQTPWMEREPEPGYWDRGTEICKRHQHTNAIDLETLRARYNQSRGLHTLQVDYGCDFLSDGSVRGSRRDGYDGWDFMSFELGSQGFVPADGAAQVTTRRWNSDGAVVEQLTNYLEHICPEWLQKYVRYGQEALERKEPPDVHVSGKEEFGTLILSCHAYGFYPRPIAVSWMKGDEIRDQETEWGGVVPNSDGTFHTWARIEARPEEREQYRCRVEHSGMPEPGIFALEPESGGNLTLVVTVSVIAAIVILVLLVGFIVWKLQSGRRQNHGYSPPARKDVGTNGSTAVQITA
SIO_010081: LOC116436894
subclass of: SO_0000673
so part of: LOC116436894
location: join(1013714..1013789,1016388..1016831,1018488..1018751,1022720..1022995,1023214..1023486,1023588..1023695,1023800..1023835,1023955..1023987,1024694..1024710)
location: region:1013714-1024710:1
so has part: feature:1013714-1013789:1:exon
so has part: feature:1016388-1016831:1:exon
so has part: feature:1018488-1018751:1:exon
so has part: feature:1022720-1022995:1:exon
so has part: feature:1023214-1023486:1:exon
so has part: feature:1023588-1023695:1:exon
so has part: feature:1023800-1023835:1:exon
so has part: feature:1023955-1023987:1:exon
so has part: feature:1024694-1024710:1:exon

XP_031950227.1
type: Protein
SIO_000068: ncbiprotein

position:1013714:1
position: 1013714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024710:1
position: 1024710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013714-1013789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1016388-1016831:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1018488-1018751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022720-1022995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1023214-1023486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1023588-1023695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1023800-1023835:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1023955-1023987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1024694-1024710:1:exon

FLOT1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: FLOT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1029618..1046151
location: region:1029618-1046151:1
so has part: feature:1029618-1046151:1:exon
subclass of: SO_0000010

116436892
type: Gene
SIO_000068: ncbigene

position:1029618:1
position: 1029618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046151:1
position: 1046151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029618-1046151:1:exon

FLOT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FLOT1
product: flotillin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_032094328.1
SIO_010081: FLOT1
subclass of: SO_0000673
so part of: FLOT1
location: join(1029618..1029849,1030279..1030354,1030445..1030535,1031666..1031809,1032818..1032937,1033336..1033431,1033695..1033847,1034347..1034528,1035525..1035570,1038634..1038771,1043345..1043500,1045927..1046151)
location: region:1029618-1046151:1
so has part: feature:1029618-1029849:1:exon
so has part: feature:1030279-1030354:1:exon
so has part: feature:1030445-1030535:1:exon
so has part: feature:1031666-1031809:1:exon
so has part: feature:1032818-1032937:1:exon
so has part: feature:1033336-1033431:1:exon
so has part: feature:1033695-1033847:1:exon
so has part: feature:1034347-1034528:1:exon
so has part: feature:1035525-1035570:1:exon
so has part: feature:1038634-1038771:1:exon
so has part: feature:1043345-1043500:1:exon
so has part: feature:1045927-1046151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1029618-1029849:1:exon

position:1029849:1
position: 1029849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1030279-1030354:1:exon

position:1030279:1
position: 1030279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030354:1
position: 1030354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030445-1030535:1:exon

position:1030445:1
position: 1030445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030535:1
position: 1030535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1031666-1031809:1:exon

position:1031666:1
position: 1031666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031809:1
position: 1031809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1032818-1032937:1:exon

position:1032818:1
position: 1032818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032937:1
position: 1032937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1033336-1033431:1:exon

position:1033336:1
position: 1033336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033431:1
position: 1033431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1033695-1033847:1:exon

position:1033695:1
position: 1033695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033847:1
position: 1033847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1034347-1034528:1:exon

position:1034347:1
position: 1034347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034528:1
position: 1034528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1035525-1035570:1:exon

position:1035525:1
position: 1035525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035570:1
position: 1035570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1038634-1038771:1:exon

position:1038634:1
position: 1038634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038771:1
position: 1038771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1043345-1043500:1:exon

position:1043345:1
position: 1043345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043500:1
position: 1043500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1045927-1046151:1:exon

position:1045927:1
position: 1045927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FLOT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FLOT1
product: flotillin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032094326.1
SIO_010081: FLOT1
subclass of: SO_0000673
so part of: FLOT1
location: join(1029637..1029711,1029758..1029849,1030279..1030354,1030445..1030535,1031666..1031809,1032818..1032937,1033336..1033431,1033695..1033847,1034347..1034528,1035525..1035570,1038634..1038771,1043345..1043500,1045927..1046151)
location: region:1029637-1046151:1
so has part: feature:1029637-1029711:1:exon
so has part: feature:1029758-1029849:1:exon
so has part: feature:1030279-1030354:1:exon
so has part: feature:1030445-1030535:1:exon
so has part: feature:1031666-1031809:1:exon
so has part: feature:1032818-1032937:1:exon
so has part: feature:1033336-1033431:1:exon
so has part: feature:1033695-1033847:1:exon
so has part: feature:1034347-1034528:1:exon
so has part: feature:1035525-1035570:1:exon
so has part: feature:1038634-1038771:1:exon
so has part: feature:1043345-1043500:1:exon
so has part: feature:1045927-1046151:1:exon

position:1029637:1
position: 1029637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029637-1029711:1:exon

position:1029711:1
position: 1029711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1029758-1029849:1:exon

position:1029758:1
position: 1029758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030279-1030354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030445-1030535:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031666-1031809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1032818-1032937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033336-1033431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1033695-1033847:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034347-1034528:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1035525-1035570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1038634-1038771:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1043345-1043500:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1045927-1046151:1:exon

FLOT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FLOT1
product: flotillin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032094327.1
SIO_010081: FLOT1
subclass of: SO_0000673
so part of: FLOT1
location: join(1029637..1029711,1029758..1029849,1030279..1030354,1030445..1030535,1031666..1031809,1032818..1032937,1033336..1033431,1033695..1033847,1034347..1034528,1035525..1035570,1038634..1038771,1043345..1043500,1045927..1045976,1046019..1046151)
location: region:1029637-1046151:1
so has part: feature:1029637-1029711:1:exon
so has part: feature:1029758-1029849:1:exon
so has part: feature:1030279-1030354:1:exon
so has part: feature:1030445-1030535:1:exon
so has part: feature:1031666-1031809:1:exon
so has part: feature:1032818-1032937:1:exon
so has part: feature:1033336-1033431:1:exon
so has part: feature:1033695-1033847:1:exon
so has part: feature:1034347-1034528:1:exon
so has part: feature:1035525-1035570:1:exon
so has part: feature:1038634-1038771:1:exon
so has part: feature:1043345-1043500:1:exon
so has part: feature:1045927-1045976:1:exon
so has part: feature:1046019-1046151:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1029637-1029711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029758-1029849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030279-1030354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030445-1030535:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031666-1031809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1032818-1032937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033336-1033431:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1033695-1033847:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034347-1034528:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1035525-1035570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1038634-1038771:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1043345-1043500:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1045927-1045976:1:exon

position:1045976:1
position: 1045976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1046019-1046151:1:exon

position:1046019:1
position: 1046019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FLOT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FLOT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: flotillin-1 isoform X1
translation: MFFTCGPNEAMVVSGFCRSPPVMVAGGRVLVIPCLQQIQRISLNTLTLPVRSEKVYTRHGVPISVTGIAQVKIQGQNKEMLAAACQMFLGKSESEIGQIALETLEGHQRAIMAHMTVEEIYKDRQKFSDQVFRVASSDLVNMGISVVSYTLKDVHDEQDYLRSLGKGRTAQVQRDARVGEAEAKRDAGIREARARQEQVSAQLLSEEATARAQRDFQVAQAECDGAVSARRATAELAFQLQAARSQQAIAAQRGEVALVERAQRAQLQEQEVGRRRQELEATVRKPAEAERYRLEQLAEAQKMQVLLQAEAEAEALRVTGSARAAALGSRARAEAAAAAAKAEAFGQFRDAAVVDLVLQRLPQVAEAVARPLAAMQRLTLVGGAGAVGVAKVPAEILDLVTCLPRAVGALARGCQMTPTDPETSPNVPKTSPNVPKTSLNVPKMSLNVPKMSPSASTSQ
SIO_010081: FLOT1
subclass of: SO_0000673
so part of: FLOT1
location: join(1029807..1029849,1030279..1030354,1030445..1030535,1031666..1031809,1032818..1032937,1033336..1033431,1033695..1033847,1034347..1034528,1035525..1035570,1038634..1038771,1043345..1043500,1045927..1046061)
location: region:1029807-1046061:1
so has part: feature:1029807-1029849:1:exon
so has part: feature:1030279-1030354:1:exon
so has part: feature:1030445-1030535:1:exon
so has part: feature:1031666-1031809:1:exon
so has part: feature:1032818-1032937:1:exon
so has part: feature:1033336-1033431:1:exon
so has part: feature:1033695-1033847:1:exon
so has part: feature:1034347-1034528:1:exon
so has part: feature:1035525-1035570:1:exon
so has part: feature:1038634-1038771:1:exon
so has part: feature:1043345-1043500:1:exon
so has part: feature:1045927-1046061:1:exon

XP_031950217.1
type: Protein
SIO_000068: ncbiprotein

position:1029807:1
position: 1029807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046061:1
position: 1046061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029807-1029849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030279-1030354:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030445-1030535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031666-1031809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1032818-1032937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033336-1033431:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033695-1033847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034347-1034528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1035525-1035570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038634-1038771:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1043345-1043500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1045927-1046061:1:exon

FLOT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FLOT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: flotillin-1 isoform X1
translation: MFFTCGPNEAMVVSGFCRSPPVMVAGGRVLVIPCLQQIQRISLNTLTLPVRSEKVYTRHGVPISVTGIAQVKIQGQNKEMLAAACQMFLGKSESEIGQIALETLEGHQRAIMAHMTVEEIYKDRQKFSDQVFRVASSDLVNMGISVVSYTLKDVHDEQDYLRSLGKGRTAQVQRDARVGEAEAKRDAGIREARARQEQVSAQLLSEEATARAQRDFQVAQAECDGAVSARRATAELAFQLQAARSQQAIAAQRGEVALVERAQRAQLQEQEVGRRRQELEATVRKPAEAERYRLEQLAEAQKMQVLLQAEAEAEALRVTGSARAAALGSRARAEAAAAAAKAEAFGQFRDAAVVDLVLQRLPQVAEAVARPLAAMQRLTLVGGAGAVGVAKVPAEILDLVTCLPRAVGALARGCQMTPTDPETSPNVPKTSPNVPKTSLNVPKMSLNVPKMSPSASTSQ
SIO_010081: FLOT1
subclass of: SO_0000673
so part of: FLOT1
location: join(1029807..1029849,1030279..1030354,1030445..1030535,1031666..1031809,1032818..1032937,1033336..1033431,1033695..1033847,1034347..1034528,1035525..1035570,1038634..1038771,1043345..1043500,1045927..1046061)
location: region:1029807-1046061:1
so has part: feature:1029807-1029849:1:exon
so has part: feature:1030279-1030354:1:exon
so has part: feature:1030445-1030535:1:exon
so has part: feature:1031666-1031809:1:exon
so has part: feature:1032818-1032937:1:exon
so has part: feature:1033336-1033431:1:exon
so has part: feature:1033695-1033847:1:exon
so has part: feature:1034347-1034528:1:exon
so has part: feature:1035525-1035570:1:exon
so has part: feature:1038634-1038771:1:exon
so has part: feature:1043345-1043500:1:exon
so has part: feature:1045927-1046061:1:exon

XP_031950219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1029807-1029849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030279-1030354:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030445-1030535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031666-1031809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1032818-1032937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033336-1033431:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033695-1033847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034347-1034528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1035525-1035570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038634-1038771:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1043345-1043500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1045927-1046061:1:exon

FLOT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FLOT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: flotillin-1 isoform X2
translation: MFFTCGPNEAMVVSGFCRSPPVMVAGGRVLVIPCLQQIQRISLNTLTLPVRSEKVYTRHGVPISVTGIAQVKIQGQNKEMLAAACQMFLGKSESEIGQIALETLEGHQRAIMAHMTVEEIYKDRQKFSDQVFRVASSDLVNMGISVVSYTLKDVHDEQDYLRSLGKGRTAQVQRDARVGEAEAKRDAGIREARARQEQVSAQLLSEEATARAQRDFQVAQAECDGAVSARRATAELAFQLQAARSQQAIAAQRGEVALVERAQRAQLQEQEVGRRRQELEATVRKPAEAERYRLEQLAEAQKMQVLLQAEAEAEALRVTGSARAAALGSRARAEAAAAAAKAEAFGQFRDAAVVDLVLQRLPQVAEAVARPLAAMQRLTLVGGAGAVGVAKVPAEILDLVTCLPRAVGALARGCQMTPTDPETSPNVPKTSPNVPKMSPSASTSQ
SIO_010081: FLOT1
subclass of: SO_0000673
so part of: FLOT1
location: join(1029807..1029849,1030279..1030354,1030445..1030535,1031666..1031809,1032818..1032937,1033336..1033431,1033695..1033847,1034347..1034528,1035525..1035570,1038634..1038771,1043345..1043500,1045927..1045976,1046019..1046061)
location: region:1029807-1046061:1
so has part: feature:1029807-1029849:1:exon
so has part: feature:1030279-1030354:1:exon
so has part: feature:1030445-1030535:1:exon
so has part: feature:1031666-1031809:1:exon
so has part: feature:1032818-1032937:1:exon
so has part: feature:1033336-1033431:1:exon
so has part: feature:1033695-1033847:1:exon
so has part: feature:1034347-1034528:1:exon
so has part: feature:1035525-1035570:1:exon
so has part: feature:1038634-1038771:1:exon
so has part: feature:1043345-1043500:1:exon
so has part: feature:1045927-1045976:1:exon
so has part: feature:1046019-1046061:1:exon

XP_031950218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1029807-1029849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030279-1030354:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030445-1030535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031666-1031809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1032818-1032937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1033336-1033431:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1033695-1033847:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034347-1034528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1035525-1035570:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1038634-1038771:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1043345-1043500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1045927-1045976:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1046019-1046061:1:exon

LOC116436919
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1049482..1060470)
location: region:1049482-1060470:-1
so has part: feature:1049482-1060470:-1:exon
subclass of: SO_0000010

116436919
type: Gene
SIO_000068: ncbigene

position:1049482:-1
position: 1049482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060470:-1
position: 1060470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049482-1060470:-1:exon

LOC116436919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436919
product: tubulin beta-7 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 202 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032094367.1
SIO_010081: LOC116436919
subclass of: SO_0000673
so part of: LOC116436919
location: complement(join(1049482..1051187,1053698..1053808,1055952..1056060,1060264..1060470))
location: region:1049482-1060470:-1
so has part: feature:1060264-1060470:-1:exon
so has part: feature:1055952-1056060:-1:exon
so has part: feature:1053698-1053808:-1:exon
so has part: feature:1049482-1051187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060264-1060470:-1:exon

position:1060264:-1
position: 1060264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1055952-1056060:-1:exon

position:1055952:-1
position: 1055952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056060:-1
position: 1056060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1053698-1053808:-1:exon

position:1053698:-1
position: 1053698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053808:-1
position: 1053808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1049482-1051187:-1:exon

position:1051187:-1
position: 1051187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-7 chain
translation: MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA
SIO_010081: LOC116436919
subclass of: SO_0000673
so part of: LOC116436919
location: complement(join(1050130..1051187,1053698..1053808,1055952..1056060,1060264..1060320))
location: region:1050130-1060320:-1
so has part: feature:1060264-1060320:-1:exon
so has part: feature:1055952-1056060:-1:exon
so has part: feature:1053698-1053808:-1:exon
so has part: feature:1050130-1051187:-1:exon

XP_031950258.1
type: Protein
SIO_000068: ncbiprotein

position:1050130:-1
position: 1050130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060320:-1
position: 1060320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060264-1060320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1055952-1056060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1053698-1053808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050130-1051187:-1:exon

LOC116436870
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1060739..1074009
location: region:1060739-1074009:1
so has part: feature:1060739-1074009:1:exon
subclass of: SO_0000010

116436870
type: Gene
SIO_000068: ncbigene

position:1060739:1
position: 1060739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074009:1
position: 1074009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060739-1074009:1:exon

LOC116436870
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436870
product: mediator of DNA damage checkpoint protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094289.1
SIO_010081: LOC116436870
subclass of: SO_0000673
so part of: LOC116436870
location: join(1060739..1060782,1061766..1064961,1066260..1066553,1068126..1068311,1069174..1069287,1070476..1070586,1073201..1073398,1073767..1074009)
location: region:1060739-1074009:1
so has part: feature:1060739-1060782:1:exon
so has part: feature:1061766-1064961:1:exon
so has part: feature:1066260-1066553:1:exon
so has part: feature:1068126-1068311:1:exon
so has part: feature:1069174-1069287:1:exon
so has part: feature:1070476-1070586:1:exon
so has part: feature:1073201-1073398:1:exon
so has part: feature:1073767-1074009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060739-1060782:1:exon

position:1060782:1
position: 1060782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061766-1064961:1:exon

position:1061766:1
position: 1061766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064961:1
position: 1064961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066260-1066553:1:exon

position:1066260:1
position: 1066260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066553:1
position: 1066553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1068126-1068311:1:exon

position:1068126:1
position: 1068126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068311:1
position: 1068311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1069174-1069287:1:exon

position:1069174:1
position: 1069174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069287:1
position: 1069287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1070476-1070586:1:exon

position:1070476:1
position: 1070476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070586:1
position: 1070586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1073201-1073398:1:exon

position:1073201:1
position: 1073201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073398:1
position: 1073398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1073767-1074009:1:exon

position:1073767:1
position: 1073767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of DNA damage checkpoint protein 1-like
translation: MAREGALEDPAVPPDVGGPPKHLPCPRNAPDVAGEGPDPDVGSPETPRAAQNAPGTPDVGQRPPNPDVLHPKIRARMLLVESDTDVEEEEEEADPDVRPSGRRKAPRNVPGAPDVQPEPPNPDVAGLKNGRGALVVESDTDVEEEEEEGIVPDVRPSKGRKAPRNVPGAPDVEVGTPNPDVGATRTGRAAQPVGSDTDVEGEEADPDVEPPKRLKMTQNVPGTPDVRRNPPNPDVLRPKIRPRMLLVGSDTDVEGEEADPDVEPPKRLKMTQNVPGTPDVRRNPPNPDVLRPKIRPRMLLVDSDTDVEGEEADPDVRPSKRRKTPRNVPETPDVGQKPPNPDVPGPKSGHRVLLVESDTDVEEDPDMEPLKRLKMTQNVPETPDVRLRTPNPDVPGPKSGHRALLVESDTDVEEEEADPVVWTSEGREMTQNVPETPDVGRELPNPDVLHPKMGRGALLVESDTDVEEDPDVESPKRLQMTQNVPETPGVAAETPSPDVLGPRNGRWAQLVGSDTDAEADPDVEPPKQGKITQNVPGTPDVGRKLPNPDVSHPETRAQELLVESDTDVEEDPDVESQKWPKMTQSVPETPGVAAETPSPDVSCPRNGLGAQLVGSDTDVEADPDVEPPKQLATTQNVPETPDVGRKLPNPDVPRPEMGCGTLLVGSDTDVEEDPDVEASERLKMTQSVPETPDVAAATPNPDVSCPKMGLLVESDTDVEEDPDVEPRERLQMTQNDPGAPDVGAGSPDPAVAATQLFPAPDPAVEGEEPDPDVRPPERLRMAQNNPGALDVGPEAPDPDVGSPQRLRVAQTVARIPDVAGGNSDSDSDPDVAATQLFLPPDPDVGRRPERLRRTRSAPGIPDVEEEEEEEGPDPDVATQLFLPPDPDVGPPKRLRTSRGGRGVPDVEEEEEESDPDVAATQLFLPPPDVGGAPEGPGIPDVEEPGSPSPDPDVATQLFPPPDPDVGGPSEPGAPDVGAGSPDPDVEEGEGFDVATQLFPAPRPDVEEGEGPPNPDVATQLFPPPGPDVESPKAAAGQPRAPDVRRESPNPDVGGPPGPAPQGEEAPPTPQVRRSLRLAERRGGGASAGPSPTERGRGQAQRPRPSPKPRPQTRQSQSGEGHEVTPPSVPIKGSGRGSAVTPPPQEEEPAGGAKRRLRPRTAPGPAPIRVLFTGLVASPALLVALGTLGGTEATSVHDCSHLVTDGARRTLKLLCALARGVPIVTPEWLLQSSHGGRPLSPAPFLPRCPPLGLRLRSALARARRQPLLQGYGVHVTPSVRPRPEDIRDIVTCCGGTFLPRLPRGPAPRVLVVSCQQDRALWAPAVAAGLPLLSAEQLLAGVLQQRLALPPPPKPPKKPPQKTPQKPAKKTQKSPPRTRSGRRTPQNPPRSPRNPPKNPPSSGTAQKAPNAPQNARKRPRDPPAAAEGDFGGPEPPPSPPRTRSRRGPPQSPQ
SIO_010081: LOC116436870
subclass of: SO_0000673
so part of: LOC116436870
location: join(1060769..1060782,1061766..1064961,1066260..1066553,1068126..1068311,1069174..1069287,1070476..1070586,1073201..1073398,1073767..1074009)
location: region:1060769-1074009:1
so has part: feature:1060769-1060782:1:exon
so has part: feature:1061766-1064961:1:exon
so has part: feature:1066260-1066553:1:exon
so has part: feature:1068126-1068311:1:exon
so has part: feature:1069174-1069287:1:exon
so has part: feature:1070476-1070586:1:exon
so has part: feature:1073201-1073398:1:exon
so has part: feature:1073767-1074009:1:exon

XP_031950180.1
type: Protein
SIO_000068: ncbiprotein

position:1060769:1
position: 1060769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060769-1060782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061766-1064961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066260-1066553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1068126-1068311:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1069174-1069287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070476-1070586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1073201-1073398:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073767-1074009:1:exon

LOC116436896
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1076026..1084755
location: region:1076026-1084755:1
so has part: feature:1076026-1084755:1:exon
subclass of: SO_0000010

116436896
type: Gene
SIO_000068: ncbigene

position:1076026:1
position: 1076026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084755:1
position: 1084755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076026-1084755:1:exon

LOC116436896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436896
product: inner centromere protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032094338.1
SIO_010081: LOC116436896
subclass of: SO_0000673
so part of: LOC116436896
location: join(1076026..1076081,1076885..1077142,1077793..1078288,1080757..1080846,1081503..1081576,1082111..1082202,1082643..1082706,1083491..1083618,1084370..1084755)
location: region:1076026-1084755:1
so has part: feature:1076026-1076081:1:exon
so has part: feature:1076885-1077142:1:exon
so has part: feature:1077793-1078288:1:exon
so has part: feature:1080757-1080846:1:exon
so has part: feature:1081503-1081576:1:exon
so has part: feature:1082111-1082202:1:exon
so has part: feature:1082643-1082706:1:exon
so has part: feature:1083491-1083618:1:exon
so has part: feature:1084370-1084755:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076026-1076081:1:exon

position:1076081:1
position: 1076081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1076885-1077142:1:exon

position:1076885:1
position: 1076885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077142:1
position: 1077142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1077793-1078288:1:exon

position:1077793:1
position: 1077793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078288:1
position: 1078288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1080757-1080846:1:exon

position:1080757:1
position: 1080757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080846:1
position: 1080846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1081503-1081576:1:exon

position:1081503:1
position: 1081503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081576:1
position: 1081576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1082111-1082202:1:exon

position:1082111:1
position: 1082111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082202:1
position: 1082202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1082643-1082706:1:exon

position:1082643:1
position: 1082643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082706:1
position: 1082706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1083491-1083618:1:exon

position:1083491:1
position: 1083491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083618:1
position: 1083618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1084370-1084755:1:exon

position:1084370:1
position: 1084370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inner centromere protein-like
translation: MATGAAGPEAEKAGKRSPMAEPRPGPRGPPSASQLPPPSASQCSQLPPPSAPSASQLPPPSAPSASSQLPPPSAPSASQCSQLRPPSLGGLVPPSHFVLRPRSLGAELEALRGRGQHLEAELEIERGRGQRLEAELAEERGRGLALEAELEALRGRGHRLEAELAEEKGRGQRLEAELAEERGCGQRLEAELAEERGRGQVLEEELAEERGRGQRLEAELAEERGRGQRLEAELAEERGRGQVLEEELAAWRGRGLGMEGAEPSPEQVLLRRWRRKVLELLLRLSLSRGEEQRLREQAVSRERRRAEVAEEALGELGRALSRLWGSQAELSAALGALGTLSERLERAGHRVTALVASGRLRWQREPEGTAGDSGAAAPEARWHRGGTGGGSVPVSPPRCPLEATKGRDGTGAAAGTGSLGPWLSQLQALGAAILGDSGATVGPPRPAAARGALAPTAPMAPMAPMSPPPRG
SIO_010081: LOC116436896
subclass of: SO_0000673
so part of: LOC116436896
location: join(1076035..1076081,1076885..1077142,1077793..1078288,1080757..1080846,1081503..1081576,1082111..1082202,1082643..1082706,1083491..1083618,1084370..1084536)
location: region:1076035-1084536:1
so has part: feature:1076035-1076081:1:exon
so has part: feature:1076885-1077142:1:exon
so has part: feature:1077793-1078288:1:exon
so has part: feature:1080757-1080846:1:exon
so has part: feature:1081503-1081576:1:exon
so has part: feature:1082111-1082202:1:exon
so has part: feature:1082643-1082706:1:exon
so has part: feature:1083491-1083618:1:exon
so has part: feature:1084370-1084536:1:exon

XP_031950229.1
type: Protein
SIO_000068: ncbiprotein

position:1076035:1
position: 1076035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084536:1
position: 1084536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076035-1076081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076885-1077142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077793-1078288:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080757-1080846:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1081503-1081576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082111-1082202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082643-1082706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1083491-1083618:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1084370-1084536:1:exon

LOC116436953
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436953
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1124567..1131582
location: region:1124567-1131582:1
so has part: feature:1124567-1131582:1:exon
subclass of: SO_0000011

116436953
type: Gene
SIO_000068: ncbigene

position:1124567:1
position: 1124567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131582:1
position: 1131582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124567-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004237106.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1124567..1124691,1125374..1125445,1125803..1127102,1127217..1129200,1129285..1129324,1129425..1131582)
location: region:1124567-1131582:1
so has part: feature:1124567-1124691:1:exon
so has part: feature:1125374-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1124567-1124691:1:exon

position:1124691:1
position: 1124691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1125374-1125445:1:exon

position:1125374:1
position: 1125374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125445:1
position: 1125445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1125803-1127102:1:exon

position:1125803:1
position: 1125803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127102:1
position: 1127102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1127217-1129200:1:exon

position:1127217:1
position: 1127217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129200:1
position: 1129200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1129285-1129324:1:exon

position:1129285:1
position: 1129285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129324:1
position: 1129324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1129425-1131582:1:exon

position:1129425:1
position: 1129425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004237109.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1124567..1124691,1125374..1125445,1125806..1127102,1127217..1129200,1129285..1129324,1129425..1131582)
location: region:1124567-1131582:1
so has part: feature:1124567-1124691:1:exon
so has part: feature:1125374-1125445:1:exon
so has part: feature:1125806-1127102:1:exon
so has part: feature:1127217-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1124567-1124691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125374-1125445:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1125806-1127102:1:exon

position:1125806:1
position: 1125806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1127217-1129200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004237117.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1129200,1129285..1129324,1129401..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129401-1131582:1:exon

position:1125315:1
position: 1125315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1129200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1129401-1131582:1:exon

position:1129401:1
position: 1129401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004237105.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1129200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004237107.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1129200,1129285..1129324,1129425..1130661,1130865..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1130661:1:exon
so has part: feature:1130865-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1129200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1129425-1130661:1:exon

position:1130661:1
position: 1130661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1130865-1131582:1:exon

position:1130865:1
position: 1130865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004237111.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1129200,1129285..1129324,1129425..1130661,1131280..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1130661:1:exon
so has part: feature:1131280-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1129200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1129425-1130661:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131280-1131582:1:exon

position:1131280:1
position: 1131280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004237122.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1129200,1129285..1129324,1130570..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1130570-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1129200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1130570-1131582:1:exon

position:1130570:1
position: 1130570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004237115.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1129088,1129160..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1129088:1:exon
so has part: feature:1129160-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1129088:1:exon

position:1129088:1
position: 1129088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1129160-1129200:1:exon

position:1129160:1
position: 1129160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004237112.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1128941,1129045..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1128941:1:exon
so has part: feature:1129045-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1128941:1:exon

position:1128941:1
position: 1128941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1129045-1129200:1:exon

position:1129045:1
position: 1129045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004237119.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1128941,1129045..1129088,1129160..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1128941:1:exon
so has part: feature:1129045-1129088:1:exon
so has part: feature:1129160-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1128941:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1129045-1129088:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1129160-1129200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004237113.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1128793,1128898..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1128793:1:exon
so has part: feature:1128898-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1128793:1:exon

position:1128793:1
position: 1128793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1128898-1129200:1:exon

position:1128898:1
position: 1128898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004237118.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1128793,1128898..1128941,1129045..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1128793:1:exon
so has part: feature:1128898-1128941:1:exon
so has part: feature:1129045-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1128793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1128898-1128941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1129045-1129200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004237110.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1128682,1128761..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1128682:1:exon
so has part: feature:1128761-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1128682:1:exon

position:1128682:1
position: 1128682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1128761-1129200:1:exon

position:1128761:1
position: 1128761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004237120.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1128682,1128761..1128793,1128898..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1128682:1:exon
so has part: feature:1128761-1128793:1:exon
so has part: feature:1128898-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1128682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1128761-1128793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1128898-1129200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004237116.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1128660,1128761..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1128660:1:exon
so has part: feature:1128761-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1128660:1:exon

position:1128660:1
position: 1128660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1128761-1129200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004237121.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1128660,1128761..1128793,1128898..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1128660:1:exon
so has part: feature:1128761-1128793:1:exon
so has part: feature:1128898-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1128660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1128761-1128793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1128898-1129200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004237114.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1127833,1127979..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1127833:1:exon
so has part: feature:1127979-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1127833:1:exon

position:1127833:1
position: 1127833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1127979-1129200:1:exon

position:1127979:1
position: 1127979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129425-1131582:1:exon

LOC116436953
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436953
product: uncharacterized LOC116436953, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004237108.1
SIO_010081: LOC116436953
subclass of: SO_0000673
so part of: LOC116436953
location: join(1125315..1125445,1125803..1127102,1127217..1127411,1127594..1129200,1129285..1129324,1129425..1131582)
location: region:1125315-1131582:1
so has part: feature:1125315-1125445:1:exon
so has part: feature:1125803-1127102:1:exon
so has part: feature:1127217-1127411:1:exon
so has part: feature:1127594-1129200:1:exon
so has part: feature:1129285-1129324:1:exon
so has part: feature:1129425-1131582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125315-1125445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1125803-1127102:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127217-1127411:1:exon

position:1127411:1
position: 1127411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1127594-1129200:1:exon

position:1127594:1
position: 1127594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1129285-1129324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1129425-1131582:1:exon

LOC116436888
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1131953..1139064
location: region:1131953-1139064:1
so has part: feature:1131953-1139064:1:exon
subclass of: SO_0000010

116436888
type: Gene
SIO_000068: ncbigene

position:1131953:1
position: 1131953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139064:1
position: 1139064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131953-1139064:1:exon

LOC116436888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436888
product: zinc finger protein 692-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032094321.1
SIO_010081: LOC116436888
subclass of: SO_0000673
so part of: LOC116436888
location: join(1131953..1132106,1132709..1132905,1132995..1133026,1133956..1134004,1134152..1134289,1134811..1134936,1136922..1136984,1137238..1137316,1137418..1137532,1137923..1138022,1138471..1139064)
location: region:1131953-1139064:1
so has part: feature:1131953-1132106:1:exon
so has part: feature:1132709-1132905:1:exon
so has part: feature:1132995-1133026:1:exon
so has part: feature:1133956-1134004:1:exon
so has part: feature:1134152-1134289:1:exon
so has part: feature:1134811-1134936:1:exon
so has part: feature:1136922-1136984:1:exon
so has part: feature:1137238-1137316:1:exon
so has part: feature:1137418-1137532:1:exon
so has part: feature:1137923-1138022:1:exon
so has part: feature:1138471-1139064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1131953-1132106:1:exon

position:1132106:1
position: 1132106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1132709-1132905:1:exon

position:1132709:1
position: 1132709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132905:1
position: 1132905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1132995-1133026:1:exon

position:1132995:1
position: 1132995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133026:1
position: 1133026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1133956-1134004:1:exon

position:1133956:1
position: 1133956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134004:1
position: 1134004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1134152-1134289:1:exon

position:1134152:1
position: 1134152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134289:1
position: 1134289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1134811-1134936:1:exon

position:1134811:1
position: 1134811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134936:1
position: 1134936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1136922-1136984:1:exon

position:1136922:1
position: 1136922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136984:1
position: 1136984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1137238-1137316:1:exon

position:1137238:1
position: 1137238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137316:1
position: 1137316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1137418-1137532:1:exon

position:1137418:1
position: 1137418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137532:1
position: 1137532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1137923-1138022:1:exon

position:1137923:1
position: 1137923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138022:1
position: 1138022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1138471-1139064:1:exon

position:1138471:1
position: 1138471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436888
product: zinc finger protein 692-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032094322.1
SIO_010081: LOC116436888
subclass of: SO_0000673
so part of: LOC116436888
location: join(1131953..1132106,1132709..1132905,1132995..1133026,1133956..1134004,1134155..1134289,1134811..1134936,1136922..1136984,1137238..1137316,1137418..1137532,1137923..1138022,1138471..1139064)
location: region:1131953-1139064:1
so has part: feature:1131953-1132106:1:exon
so has part: feature:1132709-1132905:1:exon
so has part: feature:1132995-1133026:1:exon
so has part: feature:1133956-1134004:1:exon
so has part: feature:1134155-1134289:1:exon
so has part: feature:1134811-1134936:1:exon
so has part: feature:1136922-1136984:1:exon
so has part: feature:1137238-1137316:1:exon
so has part: feature:1137418-1137532:1:exon
so has part: feature:1137923-1138022:1:exon
so has part: feature:1138471-1139064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1131953-1132106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132709-1132905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132995-1133026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133956-1134004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134155-1134289:1:exon

position:1134155:1
position: 1134155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1134811-1134936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1136922-1136984:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137238-1137316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137418-1137532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1137923-1138022:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1138471-1139064:1:exon

LOC116436888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436888
product: zinc finger protein 692-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_032094319.1
SIO_010081: LOC116436888
subclass of: SO_0000673
so part of: LOC116436888
location: join(1131954..1132106,1132709..1132905,1132995..1133026,1133365..1133742,1133956..1134004,1134152..1134289,1134811..1134936,1136922..1136984,1137238..1137316,1137418..1137532,1137923..1138022,1138471..1139064)
location: region:1131954-1139064:1
so has part: feature:1131954-1132106:1:exon
so has part: feature:1132709-1132905:1:exon
so has part: feature:1132995-1133026:1:exon
so has part: feature:1133365-1133742:1:exon
so has part: feature:1133956-1134004:1:exon
so has part: feature:1134152-1134289:1:exon
so has part: feature:1134811-1134936:1:exon
so has part: feature:1136922-1136984:1:exon
so has part: feature:1137238-1137316:1:exon
so has part: feature:1137418-1137532:1:exon
so has part: feature:1137923-1138022:1:exon
so has part: feature:1138471-1139064:1:exon

position:1131954:1
position: 1131954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131954-1132106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132709-1132905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132995-1133026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133365-1133742:1:exon

position:1133365:1
position: 1133365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133742:1
position: 1133742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1133956-1134004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134152-1134289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134811-1134936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1136922-1136984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137238-1137316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1137418-1137532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1137923-1138022:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1138471-1139064:1:exon

LOC116436888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436888
product: zinc finger protein 692-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_032094320.1
SIO_010081: LOC116436888
subclass of: SO_0000673
so part of: LOC116436888
location: join(1131955..1132106,1132709..1132905,1132995..1133026,1133365..1133742,1133956..1134004,1134155..1134289,1134811..1134936,1136922..1136984,1137238..1137316,1137418..1137532,1137923..1138022,1138471..1139064)
location: region:1131955-1139064:1
so has part: feature:1131955-1132106:1:exon
so has part: feature:1132709-1132905:1:exon
so has part: feature:1132995-1133026:1:exon
so has part: feature:1133365-1133742:1:exon
so has part: feature:1133956-1134004:1:exon
so has part: feature:1134155-1134289:1:exon
so has part: feature:1134811-1134936:1:exon
so has part: feature:1136922-1136984:1:exon
so has part: feature:1137238-1137316:1:exon
so has part: feature:1137418-1137532:1:exon
so has part: feature:1137923-1138022:1:exon
so has part: feature:1138471-1139064:1:exon

position:1131955:1
position: 1131955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131955-1132106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132709-1132905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132995-1133026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133365-1133742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133956-1134004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134155-1134289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134811-1134936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1136922-1136984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137238-1137316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1137418-1137532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1137923-1138022:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1138471-1139064:1:exon

LOC116436888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 692-like isoform X1
translation: MERGAAEEPFPVDSARGGRPRAPECVRRQKRRELDARRSKCRIRIGGHLERWCRLKEQLGFTLHSQLAQFLLDRYSSHGCTWSPGELELERLQPAALQRLVVLSHGHGQECGFVPDILLPAPGSSAPLVWECVAGHRFSWGGSGVPNSPSSDPPRAAQGGSPSLDAGRRHSLRRAMPGSNKAGVEGAAGSPRGDGDQGEELGDGGDSGGTARQVPLEPGPVAAAGGSSAIPGKDVEPGVEPREEEEDEDFAEGDDLAYTDDLHDENYHPSLDSDSEPQRHQSQPKARKKPIEEQPLLEPPLPSSGPSEEKSGRVSCRRRPRASDKDVAQIGPKRIRKAAKREILLCDFEGCGKIFSNRQYLNHHQKYQHVHQKTFTCSEPTCGKSFNFKKHLKEHEKLHSDKRDYICEFCARSFRTSSNLIIHRRIHTGEKPLQCEICGFTCRQKASLNWHMRKHDADSFYQFPCDVCGKRFEKRDNVTAHKSKSHPRGLEGPPQPEGIQQHPEPPGPVEPLELLGDVLGSGGDTGRTPLEYGGGDVGQDPGTPQGRGMGEGGS
SIO_010081: LOC116436888
subclass of: SO_0000673
so part of: LOC116436888
location: join(1132083..1132106,1132709..1132905,1132995..1133026,1133365..1133742,1133956..1134004,1134152..1134289,1134811..1134936,1136922..1136984,1137238..1137316,1137418..1137532,1137923..1138022,1138471..1138834)
location: region:1132083-1138834:1
so has part: feature:1132083-1132106:1:exon
so has part: feature:1132709-1132905:1:exon
so has part: feature:1132995-1133026:1:exon
so has part: feature:1133365-1133742:1:exon
so has part: feature:1133956-1134004:1:exon
so has part: feature:1134152-1134289:1:exon
so has part: feature:1134811-1134936:1:exon
so has part: feature:1136922-1136984:1:exon
so has part: feature:1137238-1137316:1:exon
so has part: feature:1137418-1137532:1:exon
so has part: feature:1137923-1138022:1:exon
so has part: feature:1138471-1138834:1:exon

XP_031950210.1
type: Protein
SIO_000068: ncbiprotein

position:1132083:1
position: 1132083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138834:1
position: 1138834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132083-1132106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132709-1132905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132995-1133026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133365-1133742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133956-1134004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134152-1134289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134811-1134936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1136922-1136984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137238-1137316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1137418-1137532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1137923-1138022:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1138471-1138834:1:exon

LOC116436888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 692-like isoform X2
translation: MERGAAEEPFPVDSARGGRPRAPECVRRQKRRELDARRSKCRIRIGGHLERWCRLKEQLGFTLHSQLAQFLLDRYSSHGCTWSPGELELERLQPAALQRLVVLSHGHGQECGFVPDILLPAPGSSAPLVWECVAGHRFSWGGSGVPNSPSSDPPRAAQGGSPSLDAGRRHSLRRAMPGSNKAGVEGAAGSPRGDGDQGEELGDGGDSGGTARQVPLEPGPVAAAGGSAIPGKDVEPGVEPREEEEDEDFAEGDDLAYTDDLHDENYHPSLDSDSEPQRHQSQPKARKKPIEEQPLLEPPLPSSGPSEEKSGRVSCRRRPRASDKDVAQIGPKRIRKAAKREILLCDFEGCGKIFSNRQYLNHHQKYQHVHQKTFTCSEPTCGKSFNFKKHLKEHEKLHSDKRDYICEFCARSFRTSSNLIIHRRIHTGEKPLQCEICGFTCRQKASLNWHMRKHDADSFYQFPCDVCGKRFEKRDNVTAHKSKSHPRGLEGPPQPEGIQQHPEPPGPVEPLELLGDVLGSGGDTGRTPLEYGGGDVGQDPGTPQGRGMGEGGS
SIO_010081: LOC116436888
subclass of: SO_0000673
so part of: LOC116436888
location: join(1132083..1132106,1132709..1132905,1132995..1133026,1133365..1133742,1133956..1134004,1134155..1134289,1134811..1134936,1136922..1136984,1137238..1137316,1137418..1137532,1137923..1138022,1138471..1138834)
location: region:1132083-1138834:1
so has part: feature:1132083-1132106:1:exon
so has part: feature:1132709-1132905:1:exon
so has part: feature:1132995-1133026:1:exon
so has part: feature:1133365-1133742:1:exon
so has part: feature:1133956-1134004:1:exon
so has part: feature:1134155-1134289:1:exon
so has part: feature:1134811-1134936:1:exon
so has part: feature:1136922-1136984:1:exon
so has part: feature:1137238-1137316:1:exon
so has part: feature:1137418-1137532:1:exon
so has part: feature:1137923-1138022:1:exon
so has part: feature:1138471-1138834:1:exon

XP_031950211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1132083-1132106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132709-1132905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132995-1133026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133365-1133742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1133956-1134004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134155-1134289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1134811-1134936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1136922-1136984:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137238-1137316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1137418-1137532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1137923-1138022:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1138471-1138834:1:exon

LOC116436888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 692-like isoform X3
translation: MERGAAEEPFPVDSARGGRPRAPECVRRQKRRELDARRSKCRIRIGGHLERWCRLKEQLGFTLHSQLAQFLLDRYSSHGCTWSPARQVPLEPGPVAAAGGSSAIPGKDVEPGVEPREEEEDEDFAEGDDLAYTDDLHDENYHPSLDSDSEPQRHQSQPKARKKPIEEQPLLEPPLPSSGPSEEKSGRVSCRRRPRASDKDVAQIGPKRIRKAAKREILLCDFEGCGKIFSNRQYLNHHQKYQHVHQKTFTCSEPTCGKSFNFKKHLKEHEKLHSDKRDYICEFCARSFRTSSNLIIHRRIHTGEKPLQCEICGFTCRQKASLNWHMRKHDADSFYQFPCDVCGKRFEKRDNVTAHKSKSHPRGLEGPPQPEGIQQHPEPPGPVEPLELLGDVLGSGGDTGRTPLEYGGGDVGQDPGTPQGRGMGEGGS
SIO_010081: LOC116436888
subclass of: SO_0000673
so part of: LOC116436888
location: join(1132083..1132106,1132709..1132905,1132995..1133026,1133956..1134004,1134152..1134289,1134811..1134936,1136922..1136984,1137238..1137316,1137418..1137532,1137923..1138022,1138471..1138834)
location: region:1132083-1138834:1
so has part: feature:1132083-1132106:1:exon
so has part: feature:1132709-1132905:1:exon
so has part: feature:1132995-1133026:1:exon
so has part: feature:1133956-1134004:1:exon
so has part: feature:1134152-1134289:1:exon
so has part: feature:1134811-1134936:1:exon
so has part: feature:1136922-1136984:1:exon
so has part: feature:1137238-1137316:1:exon
so has part: feature:1137418-1137532:1:exon
so has part: feature:1137923-1138022:1:exon
so has part: feature:1138471-1138834:1:exon

XP_031950212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1132083-1132106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132709-1132905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132995-1133026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133956-1134004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134152-1134289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134811-1134936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1136922-1136984:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137238-1137316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137418-1137532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1137923-1138022:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1138471-1138834:1:exon

LOC116436888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 692-like isoform X4
translation: MERGAAEEPFPVDSARGGRPRAPECVRRQKRRELDARRSKCRIRIGGHLERWCRLKEQLGFTLHSQLAQFLLDRYSSHGCTWSPARQVPLEPGPVAAAGGSAIPGKDVEPGVEPREEEEDEDFAEGDDLAYTDDLHDENYHPSLDSDSEPQRHQSQPKARKKPIEEQPLLEPPLPSSGPSEEKSGRVSCRRRPRASDKDVAQIGPKRIRKAAKREILLCDFEGCGKIFSNRQYLNHHQKYQHVHQKTFTCSEPTCGKSFNFKKHLKEHEKLHSDKRDYICEFCARSFRTSSNLIIHRRIHTGEKPLQCEICGFTCRQKASLNWHMRKHDADSFYQFPCDVCGKRFEKRDNVTAHKSKSHPRGLEGPPQPEGIQQHPEPPGPVEPLELLGDVLGSGGDTGRTPLEYGGGDVGQDPGTPQGRGMGEGGS
SIO_010081: LOC116436888
subclass of: SO_0000673
so part of: LOC116436888
location: join(1132083..1132106,1132709..1132905,1132995..1133026,1133956..1134004,1134155..1134289,1134811..1134936,1136922..1136984,1137238..1137316,1137418..1137532,1137923..1138022,1138471..1138834)
location: region:1132083-1138834:1
so has part: feature:1132083-1132106:1:exon
so has part: feature:1132709-1132905:1:exon
so has part: feature:1132995-1133026:1:exon
so has part: feature:1133956-1134004:1:exon
so has part: feature:1134155-1134289:1:exon
so has part: feature:1134811-1134936:1:exon
so has part: feature:1136922-1136984:1:exon
so has part: feature:1137238-1137316:1:exon
so has part: feature:1137418-1137532:1:exon
so has part: feature:1137923-1138022:1:exon
so has part: feature:1138471-1138834:1:exon

XP_031950213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1132083-1132106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132709-1132905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1132995-1133026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1133956-1134004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1134155-1134289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1134811-1134936:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1136922-1136984:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137238-1137316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1137418-1137532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1137923-1138022:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1138471-1138834:1:exon

LOC116436895
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1139282..1145527)
location: region:1139282-1145527:-1
so has part: feature:1139282-1145527:-1:exon
subclass of: SO_0000010

116436895
type: Gene
SIO_000068: ncbigene

position:1139282:-1
position: 1139282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145527:-1
position: 1145527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1139282-1145527:-1:exon

LOC116436895
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436895
product: E3 ubiquitin-protein ligase TRIM7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032094337.1
SIO_010081: LOC116436895
subclass of: SO_0000673
so part of: LOC116436895
location: complement(join(1139282..1140947,1141486..1141518,1141798..1141913,1142025..1142047,1142430..1142657,1142897..1142983,1145000..1145527))
location: region:1139282-1145527:-1
so has part: feature:1145000-1145527:-1:exon
so has part: feature:1142897-1142983:-1:exon
so has part: feature:1142430-1142657:-1:exon
so has part: feature:1142025-1142047:-1:exon
so has part: feature:1141798-1141913:-1:exon
so has part: feature:1141486-1141518:-1:exon
so has part: feature:1139282-1140947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145000-1145527:-1:exon

position:1145000:-1
position: 1145000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1142897-1142983:-1:exon

position:1142897:-1
position: 1142897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142983:-1
position: 1142983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1142430-1142657:-1:exon

position:1142430:-1
position: 1142430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142657:-1
position: 1142657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1142025-1142047:-1:exon

position:1142025:-1
position: 1142025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142047:-1
position: 1142047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1141798-1141913:-1:exon

position:1141798:-1
position: 1141798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141913:-1
position: 1141913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1141486-1141518:-1:exon

position:1141486:-1
position: 1141486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141518:-1
position: 1141518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1139282-1140947:-1:exon

position:1140947:-1
position: 1140947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like
translation: MEAPPAPPAAPPAPCSAARSLQDELTCPVCLEYFNDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREPVPQRLFRPNRSLGNIVHIVRQLGLPPGPAEPPPGPPAPAPPLPAAAPSGPPGPPRCPRHGEPLRLYCVQDRRAVCVVCHLSREHRAHTVLPAEEAAHAAEEVPQEHLSSLRKGREEAKAERERQSEELLKQTEVERQKIVAECKELRVFLEEKEQLLLSRLEELERDIGRRRDESVARLAEDIAQLDKLLAEQGGDSGTGNTSGESVVPAGSSLESWMFLKPEPGFSELEKKLKSFSQKSAVLKEVLLEFKENLRFELENDTGDLSLDPDTANPYLVLSEDKRSVRLRGAPQELPAHPKRFDYAFCVLASEGFSAGRHYWEVEVGDGESWVLGAARESVRRKEKVDFAPEEGIWAVGLNWKGKNWDQYQAFTSPETPLSLCERPRKIGVYLDYEGGWVAFYNADNMAPIFTFTAAFSERIFPFFWLFYVGSSLSLCN
SIO_010081: LOC116436895
subclass of: SO_0000673
so part of: LOC116436895
location: complement(join(1140421..1140947,1141486..1141518,1141798..1141913,1142025..1142047,1142430..1142657,1142897..1142983,1145000..1145512))
location: region:1140421-1145512:-1
so has part: feature:1145000-1145512:-1:exon
so has part: feature:1142897-1142983:-1:exon
so has part: feature:1142430-1142657:-1:exon
so has part: feature:1142025-1142047:-1:exon
so has part: feature:1141798-1141913:-1:exon
so has part: feature:1141486-1141518:-1:exon
so has part: feature:1140421-1140947:-1:exon

XP_031950228.1
type: Protein
SIO_000068: ncbiprotein

position:1140421:-1
position: 1140421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145512:-1
position: 1145512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145000-1145512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142897-1142983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142430-1142657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1142025-1142047:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141798-1141913:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1141486-1141518:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1140421-1140947:-1:exon

LOC116436880
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1146006..1152440
location: region:1146006-1152440:1
so has part: feature:1146006-1152440:1:exon
subclass of: SO_0000010

116436880
type: Gene
SIO_000068: ncbigene

position:1146006:1
position: 1146006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152440:1
position: 1152440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1146006-1152440:1:exon

LOC116436880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436880
product: zinc finger protein 436-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032094303.1
SIO_010081: LOC116436880
subclass of: SO_0000673
so part of: LOC116436880
location: join(1146006..1146148,1148234..1148365,1149123..1149217,1149546..1149644,1150429..1152440)
location: region:1146006-1152440:1
so has part: feature:1146006-1146148:1:exon
so has part: feature:1148234-1148365:1:exon
so has part: feature:1149123-1149217:1:exon
so has part: feature:1149546-1149644:1:exon
so has part: feature:1150429-1152440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1146006-1146148:1:exon

position:1146148:1
position: 1146148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1148234-1148365:1:exon

position:1148234:1
position: 1148234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148365:1
position: 1148365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1149123-1149217:1:exon

position:1149123:1
position: 1149123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149217:1
position: 1149217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1149546-1149644:1:exon

position:1149546:1
position: 1149546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149644:1
position: 1149644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1150429-1152440:1:exon

position:1150429:1
position: 1150429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436880
product: zinc finger protein 436-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032094305.1
SIO_010081: LOC116436880
subclass of: SO_0000673
so part of: LOC116436880
location: join(1146006..1146148,1149123..1149217,1149546..1149644,1150429..1152440)
location: region:1146006-1152440:1
so has part: feature:1146006-1146148:1:exon
so has part: feature:1149123-1149217:1:exon
so has part: feature:1149546-1149644:1:exon
so has part: feature:1150429-1152440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1146006-1146148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149123-1149217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1149546-1149644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1150429-1152440:1:exon

LOC116436880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436880
product: zinc finger protein 436-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_032094301.1
SIO_010081: LOC116436880
subclass of: SO_0000673
so part of: LOC116436880
location: join(1147746..1147957,1148234..1148365,1149123..1149217,1149546..1149644,1150429..1152440)
location: region:1147746-1152440:1
so has part: feature:1147746-1147957:1:exon
so has part: feature:1148234-1148365:1:exon
so has part: feature:1149123-1149217:1:exon
so has part: feature:1149546-1149644:1:exon
so has part: feature:1150429-1152440:1:exon

position:1147746:1
position: 1147746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147746-1147957:1:exon

position:1147957:1
position: 1147957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1148234-1148365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1149123-1149217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1149546-1149644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150429-1152440:1:exon

LOC116436880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436880
product: zinc finger protein 436-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_032094302.1
SIO_010081: LOC116436880
subclass of: SO_0000673
so part of: LOC116436880
location: join(1147746..1147957,1148237..1148365,1149123..1149217,1149546..1149644,1150429..1152440)
location: region:1147746-1152440:1
so has part: feature:1147746-1147957:1:exon
so has part: feature:1148237-1148365:1:exon
so has part: feature:1149123-1149217:1:exon
so has part: feature:1149546-1149644:1:exon
so has part: feature:1150429-1152440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1147746-1147957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148237-1148365:1:exon

position:1148237:1
position: 1148237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1149123-1149217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1149546-1149644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150429-1152440:1:exon

LOC116436880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436880
product: zinc finger protein 436-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_032094304.1
SIO_010081: LOC116436880
subclass of: SO_0000673
so part of: LOC116436880
location: join(1147746..1147957,1149123..1149217,1149546..1149644,1150429..1152440)
location: region:1147746-1152440:1
so has part: feature:1147746-1147957:1:exon
so has part: feature:1149123-1149217:1:exon
so has part: feature:1149546-1149644:1:exon
so has part: feature:1150429-1152440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1147746-1147957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149123-1149217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1149546-1149644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1150429-1152440:1:exon

LOC116436880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like
translation: MEPCVVLDPRQRALYRDVMQESYETLMALEFPISKPDLLSRLDHGEEPTALDLHISQDTPAAEHGAGAGQEAPQEEPAEEKPNADKKHPQLSASWSENHAANTCGECGKTFSHKSALVKHRKIHTGDRPHTCPDCGKGFIQRSDLTIHRRVHTGERPYGCPECGRRFSVSSSLLTHRRTHVPGTTRPDRCPQCGRSFADAAALARHQKSHLGGKPFECGVCGKAFAWSSHLERHRRIHTGEKPFQCTECGRAFAWSSHLDRHMRTHVTTIAAGDEEGVEAEEEPPPAPRKCADCGKRLNHQTDPQRFKHKGTQTPLAGAGADLAPQPHCCEQCGKYFSHSSGLLKHRHVHSSERLHPCLHCSRRFRCSAALAKHRRSHAQPSNNTDNATPATEEAAKPYPCGACGKSFGWVSHLERHRRVHTGEKPFRCGECGRGFAVSSHLERHRRVHTGERPFHCGDCGKSFAVSSTLVAHLRTHGAQPGQPHACPECGKGFGSPAGLERHRRLHRGEKPYQCGLCGKGFSWSSHYDRHRLTHTGEKPFSCAHCGKCFGRSSHRNRHQRAHAQRGPEKRHVCPDCGKAFSLGTALAAHQRLHGAGARSPLSLLPPAWWEGEQRGGTATPPELWPEDPSSAFQKHSMPSSSAAPRGWAVKALLPLTGAWRPGQGDALQSDAATLPEPWVSLPPTSS
SIO_010081: LOC116436880
subclass of: SO_0000673
so part of: LOC116436880
location: join(1149130..1149217,1149546..1149644,1150429..1152305)
location: region:1149130-1152305:1
so has part: feature:1149130-1149217:1:exon
so has part: feature:1149546-1149644:1:exon
so has part: feature:1150429-1152305:1:exon

XP_031950192.1
type: Protein
SIO_000068: ncbiprotein

position:1149130:1
position: 1149130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152305:1
position: 1152305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149130-1149217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149546-1149644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150429-1152305:1:exon

LOC116436880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like
translation: MEPCVVLDPRQRALYRDVMQESYETLMALEFPISKPDLLSRLDHGEEPTALDLHISQDTPAAEHGAGAGQEAPQEEPAEEKPNADKKHPQLSASWSENHAANTCGECGKTFSHKSALVKHRKIHTGDRPHTCPDCGKGFIQRSDLTIHRRVHTGERPYGCPECGRRFSVSSSLLTHRRTHVPGTTRPDRCPQCGRSFADAAALARHQKSHLGGKPFECGVCGKAFAWSSHLERHRRIHTGEKPFQCTECGRAFAWSSHLDRHMRTHVTTIAAGDEEGVEAEEEPPPAPRKCADCGKRLNHQTDPQRFKHKGTQTPLAGAGADLAPQPHCCEQCGKYFSHSSGLLKHRHVHSSERLHPCLHCSRRFRCSAALAKHRRSHAQPSNNTDNATPATEEAAKPYPCGACGKSFGWVSHLERHRRVHTGEKPFRCGECGRGFAVSSHLERHRRVHTGERPFHCGDCGKSFAVSSTLVAHLRTHGAQPGQPHACPECGKGFGSPAGLERHRRLHRGEKPYQCGLCGKGFSWSSHYDRHRLTHTGEKPFSCAHCGKCFGRSSHRNRHQRAHAQRGPEKRHVCPDCGKAFSLGTALAAHQRLHGAGARSPLSLLPPAWWEGEQRGGTATPPELWPEDPSSAFQKHSMPSSSAAPRGWAVKALLPLTGAWRPGQGDALQSDAATLPEPWVSLPPTSS
SIO_010081: LOC116436880
subclass of: SO_0000673
so part of: LOC116436880
location: join(1149130..1149217,1149546..1149644,1150429..1152305)
location: region:1149130-1152305:1
so has part: feature:1149130-1149217:1:exon
so has part: feature:1149546-1149644:1:exon
so has part: feature:1150429-1152305:1:exon

XP_031950193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149130-1149217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149546-1149644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150429-1152305:1:exon

LOC116436880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like
translation: MEPCVVLDPRQRALYRDVMQESYETLMALEFPISKPDLLSRLDHGEEPTALDLHISQDTPAAEHGAGAGQEAPQEEPAEEKPNADKKHPQLSASWSENHAANTCGECGKTFSHKSALVKHRKIHTGDRPHTCPDCGKGFIQRSDLTIHRRVHTGERPYGCPECGRRFSVSSSLLTHRRTHVPGTTRPDRCPQCGRSFADAAALARHQKSHLGGKPFECGVCGKAFAWSSHLERHRRIHTGEKPFQCTECGRAFAWSSHLDRHMRTHVTTIAAGDEEGVEAEEEPPPAPRKCADCGKRLNHQTDPQRFKHKGTQTPLAGAGADLAPQPHCCEQCGKYFSHSSGLLKHRHVHSSERLHPCLHCSRRFRCSAALAKHRRSHAQPSNNTDNATPATEEAAKPYPCGACGKSFGWVSHLERHRRVHTGEKPFRCGECGRGFAVSSHLERHRRVHTGERPFHCGDCGKSFAVSSTLVAHLRTHGAQPGQPHACPECGKGFGSPAGLERHRRLHRGEKPYQCGLCGKGFSWSSHYDRHRLTHTGEKPFSCAHCGKCFGRSSHRNRHQRAHAQRGPEKRHVCPDCGKAFSLGTALAAHQRLHGAGARSPLSLLPPAWWEGEQRGGTATPPELWPEDPSSAFQKHSMPSSSAAPRGWAVKALLPLTGAWRPGQGDALQSDAATLPEPWVSLPPTSS
SIO_010081: LOC116436880
subclass of: SO_0000673
so part of: LOC116436880
location: join(1149130..1149217,1149546..1149644,1150429..1152305)
location: region:1149130-1152305:1
so has part: feature:1149130-1149217:1:exon
so has part: feature:1149546-1149644:1:exon
so has part: feature:1150429-1152305:1:exon

XP_031950194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149130-1149217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149546-1149644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150429-1152305:1:exon

LOC116436880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like
translation: MEPCVVLDPRQRALYRDVMQESYETLMALEFPISKPDLLSRLDHGEEPTALDLHISQDTPAAEHGAGAGQEAPQEEPAEEKPNADKKHPQLSASWSENHAANTCGECGKTFSHKSALVKHRKIHTGDRPHTCPDCGKGFIQRSDLTIHRRVHTGERPYGCPECGRRFSVSSSLLTHRRTHVPGTTRPDRCPQCGRSFADAAALARHQKSHLGGKPFECGVCGKAFAWSSHLERHRRIHTGEKPFQCTECGRAFAWSSHLDRHMRTHVTTIAAGDEEGVEAEEEPPPAPRKCADCGKRLNHQTDPQRFKHKGTQTPLAGAGADLAPQPHCCEQCGKYFSHSSGLLKHRHVHSSERLHPCLHCSRRFRCSAALAKHRRSHAQPSNNTDNATPATEEAAKPYPCGACGKSFGWVSHLERHRRVHTGEKPFRCGECGRGFAVSSHLERHRRVHTGERPFHCGDCGKSFAVSSTLVAHLRTHGAQPGQPHACPECGKGFGSPAGLERHRRLHRGEKPYQCGLCGKGFSWSSHYDRHRLTHTGEKPFSCAHCGKCFGRSSHRNRHQRAHAQRGPEKRHVCPDCGKAFSLGTALAAHQRLHGAGARSPLSLLPPAWWEGEQRGGTATPPELWPEDPSSAFQKHSMPSSSAAPRGWAVKALLPLTGAWRPGQGDALQSDAATLPEPWVSLPPTSS
SIO_010081: LOC116436880
subclass of: SO_0000673
so part of: LOC116436880
location: join(1149130..1149217,1149546..1149644,1150429..1152305)
location: region:1149130-1152305:1
so has part: feature:1149130-1149217:1:exon
so has part: feature:1149546-1149644:1:exon
so has part: feature:1150429-1152305:1:exon

XP_031950195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149130-1149217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149546-1149644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150429-1152305:1:exon

LOC116436880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 436-like
translation: MEPCVVLDPRQRALYRDVMQESYETLMALEFPISKPDLLSRLDHGEEPTALDLHISQDTPAAEHGAGAGQEAPQEEPAEEKPNADKKHPQLSASWSENHAANTCGECGKTFSHKSALVKHRKIHTGDRPHTCPDCGKGFIQRSDLTIHRRVHTGERPYGCPECGRRFSVSSSLLTHRRTHVPGTTRPDRCPQCGRSFADAAALARHQKSHLGGKPFECGVCGKAFAWSSHLERHRRIHTGEKPFQCTECGRAFAWSSHLDRHMRTHVTTIAAGDEEGVEAEEEPPPAPRKCADCGKRLNHQTDPQRFKHKGTQTPLAGAGADLAPQPHCCEQCGKYFSHSSGLLKHRHVHSSERLHPCLHCSRRFRCSAALAKHRRSHAQPSNNTDNATPATEEAAKPYPCGACGKSFGWVSHLERHRRVHTGEKPFRCGECGRGFAVSSHLERHRRVHTGERPFHCGDCGKSFAVSSTLVAHLRTHGAQPGQPHACPECGKGFGSPAGLERHRRLHRGEKPYQCGLCGKGFSWSSHYDRHRLTHTGEKPFSCAHCGKCFGRSSHRNRHQRAHAQRGPEKRHVCPDCGKAFSLGTALAAHQRLHGAGARSPLSLLPPAWWEGEQRGGTATPPELWPEDPSSAFQKHSMPSSSAAPRGWAVKALLPLTGAWRPGQGDALQSDAATLPEPWVSLPPTSS
SIO_010081: LOC116436880
subclass of: SO_0000673
so part of: LOC116436880
location: join(1149130..1149217,1149546..1149644,1150429..1152305)
location: region:1149130-1152305:1
so has part: feature:1149130-1149217:1:exon
so has part: feature:1149546-1149644:1:exon
so has part: feature:1150429-1152305:1:exon

XP_031950196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149130-1149217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1149546-1149644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150429-1152305:1:exon

LOC116436909
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1153026..1155987)
location: region:1153026-1155987:-1
so has part: feature:1153026-1155987:-1:exon
subclass of: SO_0000010

116436909
type: Gene
SIO_000068: ncbigene

position:1153026:-1
position: 1153026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155987:-1
position: 1155987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153026-1155987:-1:exon

LOC116436909
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436909
product: zinc finger protein CKR1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_032094359.1
SIO_010081: LOC116436909
subclass of: SO_0000673
so part of: LOC116436909
location: complement(join(1153026..1154784,1155164..1155308,1155762..1155987))
location: region:1153026-1155987:-1
so has part: feature:1155762-1155987:-1:exon
so has part: feature:1155164-1155308:-1:exon
so has part: feature:1153026-1154784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1155762-1155987:-1:exon

position:1155762:-1
position: 1155762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1155164-1155308:-1:exon

position:1155164:-1
position: 1155164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155308:-1
position: 1155308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1153026-1154784:-1:exon

position:1154784:-1
position: 1154784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436909
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein CKR1-like
translation: MEPWVLLDPRQKALYRDVMHESYETLMSLAAQGLVSEKAAENGASESSAGLGPHSSHSLEREKSLGSNRRKAKRPDKAVPPGTPKSTALPKLSCVKPLRGKGPARERPFGCTDCGKSFPWASHLERHRRVHTGERPFGCPECGETYSQSSHLLQHRRTHASDRPHKCGDCGKRFAIAAELAAHGRGHAANKPHKCGDCGKGFVWASHLERHRRVHTGEKPFECTECGEAFSQGSHLAKHRRSHTGERPHRCPACGKTFCQSSDLARHRRTHLGRKPLRCGDCGKLFRAGPALARHQRCHRREHSHCCADCGKGFVWASHLERHRRVHTGERPFPCSSCGERFTQKAHLLQHRKTHSPERPYKCDDCGKRFGEAPPFLEHQRGHAKHKSYTCGDCGKGFAWASHLERHRRVHTGEKPFECPECGEAFSQGSHLAKHRRSHLPKAVGPSPLARTRLGGDTPGAHSGEEP
SIO_010081: LOC116436909
subclass of: SO_0000673
so part of: LOC116436909
location: complement(join(1153469..1154784,1155164..1155251))
location: region:1153469-1155251:-1
so has part: feature:1155164-1155251:-1:exon
so has part: feature:1153469-1154784:-1:exon

XP_031950250.1
type: Protein
SIO_000068: ncbiprotein

position:1153469:-1
position: 1153469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155251:-1
position: 1155251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155164-1155251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153469-1154784:-1:exon

IL4I1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: IL4I1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1155894..1164895
location: region:1155894-1164895:1
so has part: feature:1155894-1164895:1:exon
subclass of: SO_0000010

116436890
type: Gene
SIO_000068: ncbigene

position:1155894:1
position: 1155894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164895:1
position: 1164895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155894-1164895:1:exon

IL4I1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IL4I1
product: interleukin 4 induced 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032094325.1
SIO_010081: IL4I1
subclass of: SO_0000673
so part of: IL4I1
location: join(1155894..1156012,1156912..1159742,1161478..1161692,1162227..1162339,1162528..1162729,1163117..1163185,1163424..1163557,1163745..1164895)
location: region:1155894-1164895:1
so has part: feature:1155894-1156012:1:exon
so has part: feature:1156912-1159742:1:exon
so has part: feature:1161478-1161692:1:exon
so has part: feature:1162227-1162339:1:exon
so has part: feature:1162528-1162729:1:exon
so has part: feature:1163117-1163185:1:exon
so has part: feature:1163424-1163557:1:exon
so has part: feature:1163745-1164895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1155894-1156012:1:exon

position:1156012:1
position: 1156012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1156912-1159742:1:exon

position:1156912:1
position: 1156912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159742:1
position: 1159742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1161478-1161692:1:exon

position:1161478:1
position: 1161478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161692:1
position: 1161692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1162227-1162339:1:exon

position:1162227:1
position: 1162227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162339:1
position: 1162339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1162528-1162729:1:exon

position:1162528:1
position: 1162528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162729:1
position: 1162729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1163117-1163185:1:exon

position:1163117:1
position: 1163117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163185:1
position: 1163185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1163424-1163557:1:exon

position:1163424:1
position: 1163424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163557:1
position: 1163557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1163745-1164895:1:exon

position:1163745:1
position: 1163745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL4I1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IL4I1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-amino-acid oxidase
translation: MTGIVLFQILLLAGVLSAKQFPCFPEYCLHDQDYEELLEIVRNGLEPAAHPAHVVVVGAGIGGLTAAKLLQEAGHTVTILETSSRVGGRIRTYRPEGQDWYVELGPMRLPGKHRIVREFIRQFDLKLNPFIQRDNNTWYFLKGARVRAEEVNRNPDILNYTVKPSERGKSAVQLYREVLNKAFKTFQTTDCRKYLAQHDSFSTKEYLIKVGGLSRGAVEMIGDLLNEDSGFYLSFLASLWDFDIFDKESFDEITGGFDQLPRAFHKALPNIVQFNCTVEKIMTKGNKVRVFYRAPDTLAPTIITADYVLVTSSAKATRHIQFLPPLSPAKTHALRSIHYASASKIILACSEKFWEKDGIHGGYSITDRPSRFIYYPSHNFSSGVGVILASYTWNDDAEFFLPLTDETCLDVVLQDLADIHQVSKEYLQYTCDQYVIQKWQLDQHSLGAFAAFTPYQFVDYSQALFAHEGRVHFAGEHTAQPHAWIDTAMKSAIRAASNIHHDSGESPASDREWFGRLRQREEL
SIO_010081: IL4I1
subclass of: SO_0000673
so part of: IL4I1
location: join(1159730..1159742,1161478..1161692,1162227..1162339,1162528..1162729,1163117..1163185,1163424..1163557,1163745..1164570)
location: region:1159730-1164570:1
so has part: feature:1159730-1159742:1:exon
so has part: feature:1161478-1161692:1:exon
so has part: feature:1162227-1162339:1:exon
so has part: feature:1162528-1162729:1:exon
so has part: feature:1163117-1163185:1:exon
so has part: feature:1163424-1163557:1:exon
so has part: feature:1163745-1164570:1:exon

XP_031950216.1
type: Protein
SIO_000068: ncbiprotein

position:1159730:1
position: 1159730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164570:1
position: 1164570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159730-1159742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1161478-1161692:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1162227-1162339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1162528-1162729:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163117-1163185:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1163424-1163557:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1163745-1164570:1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1166126..1166199)
location: region:1166126-1166199:-1
so has part: feature:1166126-1166199:-1:exon
subclass of: SO_0000663

116436970
type: Gene
SIO_000068: ncbigene

position:1166126:-1
position: 1166126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166199:-1
position: 1166199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166126-1166199:-1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1166163..1166165),aa:Asn, seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: complement(1166126..1166199)
location: region:1166126-1166199:-1
so has part: feature:1166126-1166199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1166126-1166199:-1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1166528..1166609
location: region:1166528-1166609:1
so has part: feature:1166528-1166609:1:exon
subclass of: SO_0000663

116436969
type: Gene
SIO_000068: ncbigene

position:1166528:1
position: 1166528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166609:1
position: 1166609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166528-1166609:1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1166562..1166564,aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: 1166528..1166609
location: region:1166528-1166609:1
so has part: feature:1166528-1166609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1166528-1166609:1:exon

TRNAP-UGG
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAP-UGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1167175..1167246)
location: region:1167175-1167246:-1
so has part: feature:1167175-1167246:-1:exon
subclass of: SO_0000663

116436971
type: Gene
SIO_000068: ncbigene

position:1167175:-1
position: 1167175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167246:-1
position: 1167246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167175-1167246:-1:exon

TRNAP-UGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAP-UGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1167212..1167214),aa:Pro, seq:tgg)
SIO_010081: TRNAP-UGG
subclass of: SO_0000673
so part of: TRNAP-UGG
location: complement(1167175..1167246)
location: region:1167175-1167246:-1
so has part: feature:1167175-1167246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1167175-1167246:-1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1167425..1167497)
location: region:1167425-1167497:-1
so has part: feature:1167425-1167497:-1:exon
subclass of: SO_0000663

116436972
type: Gene
SIO_000068: ncbigene

position:1167425:-1
position: 1167425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167497:-1
position: 1167497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167425-1167497:-1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1167462..1167464),aa:Thr, seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: complement(1167425..1167497)
location: region:1167425-1167497:-1
so has part: feature:1167425-1167497:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1167425-1167497:-1:exon

LOC116436885
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1168179..1179338)
location: region:1168179-1179338:-1
so has part: feature:1168179-1179338:-1:exon
subclass of: SO_0000010

116436885
type: Gene
SIO_000068: ncbigene

position:1168179:-1
position: 1168179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179338:-1
position: 1179338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168179-1179338:-1:exon

LOC116436885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436885
product: E3 ubiquitin-protein ligase TRIM7-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032094313.1
SIO_010081: LOC116436885
subclass of: SO_0000673
so part of: LOC116436885
location: complement(join(1168179..1169784,1171013..1171195,1172254..1172289,1173016..1173131,1173660..1173682,1175181..1175411,1176304..1176399,1176974..1177397,1179144..1179338))
location: region:1168179-1179338:-1
so has part: feature:1179144-1179338:-1:exon
so has part: feature:1176974-1177397:-1:exon
so has part: feature:1176304-1176399:-1:exon
so has part: feature:1175181-1175411:-1:exon
so has part: feature:1173660-1173682:-1:exon
so has part: feature:1173016-1173131:-1:exon
so has part: feature:1172254-1172289:-1:exon
so has part: feature:1171013-1171195:-1:exon
so has part: feature:1168179-1169784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1179144-1179338:-1:exon

position:1179144:-1
position: 1179144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176974-1177397:-1:exon

position:1176974:-1
position: 1176974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177397:-1
position: 1177397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1176304-1176399:-1:exon

position:1176304:-1
position: 1176304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176399:-1
position: 1176399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175181-1175411:-1:exon

position:1175181:-1
position: 1175181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175411:-1
position: 1175411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1173660-1173682:-1:exon

position:1173660:-1
position: 1173660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173682:-1
position: 1173682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1173016-1173131:-1:exon

position:1173016:-1
position: 1173016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173131:-1
position: 1173131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1172254-1172289:-1:exon

position:1172254:-1
position: 1172254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172289:-1
position: 1172289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1171013-1171195:-1:exon

position:1171013:-1
position: 1171013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171195:-1
position: 1171195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1168179-1169784:-1:exon

position:1169784:-1
position: 1169784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436885
product: E3 ubiquitin-protein ligase TRIM7-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032094314.1
SIO_010081: LOC116436885
subclass of: SO_0000673
so part of: LOC116436885
location: complement(join(1168179..1169784,1172254..1172289,1173016..1173131,1173660..1173682,1175181..1175411,1176304..1176399,1176974..1177397,1178853..1179086))
location: region:1168179-1179086:-1
so has part: feature:1178853-1179086:-1:exon
so has part: feature:1176974-1177397:-1:exon
so has part: feature:1176304-1176399:-1:exon
so has part: feature:1175181-1175411:-1:exon
so has part: feature:1173660-1173682:-1:exon
so has part: feature:1173016-1173131:-1:exon
so has part: feature:1172254-1172289:-1:exon
so has part: feature:1168179-1169784:-1:exon

position:1179086:-1
position: 1179086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178853-1179086:-1:exon

position:1178853:-1
position: 1178853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176974-1177397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176304-1176399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175181-1175411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173660-1173682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1173016-1173131:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172254-1172289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1168179-1169784:-1:exon

LOC116436885
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436885
product: E3 ubiquitin-protein ligase TRIM7-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032094312.1
SIO_010081: LOC116436885
subclass of: SO_0000673
so part of: LOC116436885
location: complement(join(1168179..1169784,1171013..1171195,1172254..1172289,1173016..1173131,1173660..1173682,1175181..1175411,1176304..1176399,1176974..1177397,1178853..1179086))
location: region:1168179-1179086:-1
so has part: feature:1178853-1179086:-1:exon
so has part: feature:1176974-1177397:-1:exon
so has part: feature:1176304-1176399:-1:exon
so has part: feature:1175181-1175411:-1:exon
so has part: feature:1173660-1173682:-1:exon
so has part: feature:1173016-1173131:-1:exon
so has part: feature:1172254-1172289:-1:exon
so has part: feature:1171013-1171195:-1:exon
so has part: feature:1168179-1169784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178853-1179086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176974-1177397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176304-1176399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175181-1175411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173660-1173682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1173016-1173131:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172254-1172289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1171013-1171195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1168179-1169784:-1:exon

LOC116436885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X2
translation: MGEGKEWREAMAAVFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIVKSWKELEMDFPCPQCREVFQQKNFRPNRQLANMSEIISQFTLRGAKGAEDGLCPKHREALKLYCKDDRRTICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLRKERQELLEFKVNDDKKTQELLKTIESERQKLLSEFERLRQFLHDQEHILLGQLEKMEKNISKRQNENITDLSKEITLLNKLITELEEKIQQPMLEFLKDVMGIISRSDDVKCHKPIPVCTDMKMHVCNFSLKTVVLEKVLKKFREHLQDELGRGEKAVVSSTGVSKKDNPRVGPFPRILLTNSTPRHLWKCQKLAENTRRNLVTTTEKPKAPRCMPGEDLTLDPDSANHLLILSADLKSVRMGCRKQELPDNPKRFDTNSRVLATTGFTSGRHYWEVEVGPSDGWAFGVAKESIRRKGLTQFSPEEGIWAVQQNGGRYWAVTSPQRTPLCLSHKLSRVRVYLDYEGEEVSFYDAENMQHIFTFNVAFQEKVFPLFSVCSTVTYIKLCP
SIO_010081: LOC116436885
subclass of: SO_0000673
so part of: LOC116436885
location: complement(join(1169270..1169784,1171013..1171195,1172254..1172289,1173016..1173131,1173660..1173682,1175181..1175411,1176304..1176399,1176974..1177397,1179144..1179163))
location: region:1169270-1179163:-1
so has part: feature:1179144-1179163:-1:exon
so has part: feature:1176974-1177397:-1:exon
so has part: feature:1176304-1176399:-1:exon
so has part: feature:1175181-1175411:-1:exon
so has part: feature:1173660-1173682:-1:exon
so has part: feature:1173016-1173131:-1:exon
so has part: feature:1172254-1172289:-1:exon
so has part: feature:1171013-1171195:-1:exon
so has part: feature:1169270-1169784:-1:exon

XP_031950204.1
type: Protein
SIO_000068: ncbiprotein

position:1169270:-1
position: 1169270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179163:-1
position: 1179163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179144-1179163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176974-1177397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176304-1176399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175181-1175411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173660-1173682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1173016-1173131:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172254-1172289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1171013-1171195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1169270-1169784:-1:exon

LOC116436885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X3
translation: MSEAAAAAAGFLRRSSAERLPRTPSRWDPAASRLAAQLAPSRPVPTQNPGRFGRFGRTPLSDASTPRREAMAAVFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIVKSWKELEMDFPCPQCREVFQQKNFRPNRQLANMSEIISQFTLRGAKGAEDGLCPKHREALKLYCKDDRRTICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLRKERQELLEFKVNDDKKTQELLKTIESERQKLLSEFERLRQFLHDQEHILLGQLEKMEKNISKRQNENITDLSKEITLLNKLITELEEKIQQPMLEFLKDVMGIISRSDDVKCHKPIPVCTDMKMHVCNFSLKTVVLEKVLKKFREHLQDELGRGEKEDLTLDPDSANHLLILSADLKSVRMGCRKQELPDNPKRFDTNSRVLATTGFTSGRHYWEVEVGPSDGWAFGVAKESIRRKGLTQFSPEEGIWAVQQNGGRYWAVTSPQRTPLCLSHKLSRVRVYLDYEGEEVSFYDAENMQHIFTFNVAFQEKVFPLFSVCSTVTYIKLCP
SIO_010081: LOC116436885
subclass of: SO_0000673
so part of: LOC116436885
location: complement(join(1169270..1169784,1172254..1172289,1173016..1173131,1173660..1173682,1175181..1175411,1176304..1176399,1176974..1177397,1178853..1179052))
location: region:1169270-1179052:-1
so has part: feature:1178853-1179052:-1:exon
so has part: feature:1176974-1177397:-1:exon
so has part: feature:1176304-1176399:-1:exon
so has part: feature:1175181-1175411:-1:exon
so has part: feature:1173660-1173682:-1:exon
so has part: feature:1173016-1173131:-1:exon
so has part: feature:1172254-1172289:-1:exon
so has part: feature:1169270-1169784:-1:exon

XP_031950205.1
type: Protein
SIO_000068: ncbiprotein

position:1179052:-1
position: 1179052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178853-1179052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176974-1177397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176304-1176399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175181-1175411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173660-1173682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1173016-1173131:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172254-1172289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1169270-1169784:-1:exon

LOC116436885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X1
translation: MSEAAAAAAGFLRRSSAERLPRTPSRWDPAASRLAAQLAPSRPVPTQNPGRFGRFGRTPLSDASTPRREAMAAVFLPGNLQDEATCSVCLEFFKDPVSIECGHNFCRACIVKSWKELEMDFPCPQCREVFQQKNFRPNRQLANMSEIISQFTLRGAKGAEDGLCPKHREALKLYCKDDRRTICVVCDRSREHRPHAVVPVDEASEEYKEKIQGRLDFLRKERQELLEFKVNDDKKTQELLKTIESERQKLLSEFERLRQFLHDQEHILLGQLEKMEKNISKRQNENITDLSKEITLLNKLITELEEKIQQPMLEFLKDVMGIISRSDDVKCHKPIPVCTDMKMHVCNFSLKTVVLEKVLKKFREHLQDELGRGEKAVVSSTGVSKKDNPRVGPFPRILLTNSTPRHLWKCQKLAENTRRNLVTTTEKPKAPRCMPGEDLTLDPDSANHLLILSADLKSVRMGCRKQELPDNPKRFDTNSRVLATTGFTSGRHYWEVEVGPSDGWAFGVAKESIRRKGLTQFSPEEGIWAVQQNGGRYWAVTSPQRTPLCLSHKLSRVRVYLDYEGEEVSFYDAENMQHIFTFNVAFQEKVFPLFSVCSTVTYIKLCP
SIO_010081: LOC116436885
subclass of: SO_0000673
so part of: LOC116436885
location: complement(join(1169270..1169784,1171013..1171195,1172254..1172289,1173016..1173131,1173660..1173682,1175181..1175411,1176304..1176399,1176974..1177397,1178853..1179052))
location: region:1169270-1179052:-1
so has part: feature:1178853-1179052:-1:exon
so has part: feature:1176974-1177397:-1:exon
so has part: feature:1176304-1176399:-1:exon
so has part: feature:1175181-1175411:-1:exon
so has part: feature:1173660-1173682:-1:exon
so has part: feature:1173016-1173131:-1:exon
so has part: feature:1172254-1172289:-1:exon
so has part: feature:1171013-1171195:-1:exon
so has part: feature:1169270-1169784:-1:exon

XP_031950203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1178853-1179052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176974-1177397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1176304-1176399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175181-1175411:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173660-1173682:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1173016-1173131:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172254-1172289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1171013-1171195:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1169270-1169784:-1:exon

LOC116436958
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436958
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1177397..1179980
location: region:1177397-1179980:1
so has part: feature:1177397-1179980:1:exon
subclass of: SO_0000011

116436958
type: Gene
SIO_000068: ncbigene

position:1177397:1
position: 1177397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179980:1
position: 1179980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177397-1179980:1:exon

LOC116436958
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436958
product: uncharacterized LOC116436958
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004237127.1
SIO_010081: LOC116436958
subclass of: SO_0000673
so part of: LOC116436958
location: join(1177397..1177931,1178639..1178775,1179737..1179980)
location: region:1177397-1179980:1
so has part: feature:1177397-1177931:1:exon
so has part: feature:1178639-1178775:1:exon
so has part: feature:1179737-1179980:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1177397-1177931:1:exon

position:1177931:1
position: 1177931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1178639-1178775:1:exon

position:1178639:1
position: 1178639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178775:1
position: 1178775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1179737-1179980:1:exon

position:1179737:1
position: 1179737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436948
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1180088..1181035)
location: region:1180088-1181035:-1
so has part: feature:1180088-1181035:-1:exon
subclass of: SO_0000010

116436948
type: Gene
SIO_000068: ncbigene

position:1180088:-1
position: 1180088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181035:-1
position: 1181035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1180088-1181035:-1:exon

LOC116436948
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436948
product: ly-6/neurotoxin-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094404.1
SIO_010081: LOC116436948
subclass of: SO_0000673
so part of: LOC116436948
location: complement(join(1180088..1180263,1180682..1180801,1180935..1181035))
location: region:1180088-1181035:-1
so has part: feature:1180935-1181035:-1:exon
so has part: feature:1180682-1180801:-1:exon
so has part: feature:1180088-1180263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1180935-1181035:-1:exon

position:1180935:-1
position: 1180935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1180682-1180801:-1:exon

position:1180682:-1
position: 1180682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180801:-1
position: 1180801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1180088-1180263:-1:exon

position:1180263:-1
position: 1180263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436948
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ly-6/neurotoxin-like protein 1
translation: MEVRTCPCPTMKLLLLGLSLVLCVGVAEALRCHVCKYKIPLVGCFRGANVTTCERREKCALIKSTLGKVTLYYQQGCTSILNCGRERASDAESRLTSRYSCCETDLCNEEWGEEPTD
SIO_010081: LOC116436948
subclass of: SO_0000673
so part of: LOC116436948
location: complement(join(1180109..1180263,1180682..1180801,1180935..1181013))
location: region:1180109-1181013:-1
so has part: feature:1180935-1181013:-1:exon
so has part: feature:1180682-1180801:-1:exon
so has part: feature:1180109-1180263:-1:exon

XP_031950295.1
type: Protein
SIO_000068: ncbiprotein

position:1180109:-1
position: 1180109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181013:-1
position: 1181013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1180935-1181013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180682-1180801:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180109-1180263:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1181437..1181509)
location: region:1181437-1181509:-1
so has part: feature:1181437-1181509:-1:exon
subclass of: SO_0000663

116436973
type: Gene
SIO_000068: ncbigene

position:1181437:-1
position: 1181437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181509:-1
position: 1181509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1181437-1181509:-1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1181474..1181476),aa:Lys, seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: complement(1181437..1181509)
location: region:1181437-1181509:-1
so has part: feature:1181437-1181509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1181437-1181509:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1183342..1183414)
location: region:1183342-1183414:-1
so has part: feature:1183342-1183414:-1:exon
subclass of: SO_0000663

116436974
type: Gene
SIO_000068: ncbigene

position:1183342:-1
position: 1183342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183414:-1
position: 1183414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183342-1183414:-1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1183379..1183381),aa:Lys, seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: complement(1183342..1183414)
location: region:1183342-1183414:-1
so has part: feature:1183342-1183414:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1183342-1183414:-1:exon

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1183938..1184009)
location: region:1183938-1184009:-1
so has part: feature:1183938-1184009:-1:exon
subclass of: SO_0000663

116436975
type: Gene
SIO_000068: ncbigene

position:1183938:-1
position: 1183938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184009:-1
position: 1184009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1183938-1184009:-1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1183974..1183976),aa:Glu, seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: complement(1183938..1184009)
location: region:1183938-1184009:-1
so has part: feature:1183938-1184009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1183938-1184009:-1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1185310..1185382)
location: region:1185310-1185382:-1
so has part: feature:1185310-1185382:-1:exon
subclass of: SO_0000663

116436976
type: Gene
SIO_000068: ncbigene

position:1185310:-1
position: 1185310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185382:-1
position: 1185382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185310-1185382:-1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1185347..1185349),aa:Val, seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: complement(1185310..1185382)
location: region:1185310-1185382:-1
so has part: feature:1185310-1185382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1185310-1185382:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1185769..1185841)
location: region:1185769-1185841:-1
so has part: feature:1185769-1185841:-1:exon
subclass of: SO_0000663

116436977
type: Gene
SIO_000068: ncbigene

position:1185769:-1
position: 1185769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185841:-1
position: 1185841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185769-1185841:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1185806..1185808),aa:Val, seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(1185769..1185841)
location: region:1185769-1185841:-1
so has part: feature:1185769-1185841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1185769-1185841:-1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1186644..1186715
location: region:1186644-1186715:1
so has part: feature:1186644-1186715:1:exon
subclass of: SO_0000663

116436980
type: Gene
SIO_000068: ncbigene

position:1186644:1
position: 1186644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186715:1
position: 1186715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1186644-1186715:1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1186677..1186679,aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: 1186644..1186715
location: region:1186644-1186715:1
so has part: feature:1186644-1186715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1186644-1186715:1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1187196..1187268)
location: region:1187196-1187268:-1
so has part: feature:1187196-1187268:-1:exon
subclass of: SO_0000663

116436978
type: Gene
SIO_000068: ncbigene

position:1187196:-1
position: 1187196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187268:-1
position: 1187268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187196-1187268:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1187233..1187235),aa:Val, seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(1187196..1187268)
location: region:1187196-1187268:-1
so has part: feature:1187196-1187268:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1187196-1187268:-1:exon

TRNAK-CUU
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAK-CUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1187595..1187667
location: region:1187595-1187667:1
so has part: feature:1187595-1187667:1:exon
subclass of: SO_0000663

116436982
type: Gene
SIO_000068: ncbigene

position:1187595:1
position: 1187595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187667:1
position: 1187667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187595-1187667:1:exon

TRNAK-CUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAK-CUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1187628..1187630,aa:Lys,seq:ctt)
SIO_010081: TRNAK-CUU
subclass of: SO_0000673
so part of: TRNAK-CUU
location: 1187595..1187667
location: region:1187595-1187667:1
so has part: feature:1187595-1187667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1187595-1187667:1:exon

TRNAL-CAA
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAL-CAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1188140..1188243
location: region:1188140-1188243:1
so has part: feature:1188140-1188243:1:exon
subclass of: SO_0000663

116436983
type: Gene
SIO_000068: ncbigene

position:1188140:1
position: 1188140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188243:1
position: 1188243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188140-1188243:1:exon

TRNAL-CAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAL-CAA
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1188174..1188176,aa:Leu,seq:caa)
SIO_010081: TRNAL-CAA
subclass of: SO_0000673
so part of: TRNAL-CAA
location: join(1188140..1188177,1188198..1188243)
location: region:1188140-1188243:1
so has part: feature:1188140-1188177:1:exon
so has part: feature:1188198-1188243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1188140-1188177:1:exon

position:1188177:1
position: 1188177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1188198-1188243:1:exon

position:1188198:1
position: 1188198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436898
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1188550..1193455)
location: region:1188550-1193455:-1
so has part: feature:1188550-1193455:-1:exon
subclass of: SO_0000010

116436898
type: Gene
SIO_000068: ncbigene

position:1188550:-1
position: 1188550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193455:-1
position: 1193455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188550-1193455:-1:exon

LOC116436898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436898
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_032094341.1
SIO_010081: LOC116436898
subclass of: SO_0000673
so part of: LOC116436898
location: complement(join(1188550..1189982,1190321..1190436,1191114..1191136,1191908..1192138,1192704..1192799,1193041..1193455))
location: region:1188550-1193455:-1
so has part: feature:1193041-1193455:-1:exon
so has part: feature:1192704-1192799:-1:exon
so has part: feature:1191908-1192138:-1:exon
so has part: feature:1191114-1191136:-1:exon
so has part: feature:1190321-1190436:-1:exon
so has part: feature:1188550-1189982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1193041-1193455:-1:exon

position:1193041:-1
position: 1193041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1192704-1192799:-1:exon

position:1192704:-1
position: 1192704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192799:-1
position: 1192799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1191908-1192138:-1:exon

position:1191908:-1
position: 1191908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192138:-1
position: 1192138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1191114-1191136:-1:exon

position:1191114:-1
position: 1191114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191136:-1
position: 1191136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1190321-1190436:-1:exon

position:1190321:-1
position: 1190321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190436:-1
position: 1190436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1188550-1189982:-1:exon

position:1189982:-1
position: 1189982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAE-CUC
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAE-CUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1188754..1188825)
location: region:1188754-1188825:-1
so has part: feature:1188754-1188825:-1:exon
subclass of: SO_0000663

116436979
type: Gene
SIO_000068: ncbigene

position:1188754:-1
position: 1188754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188825:-1
position: 1188825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188754-1188825:-1:exon

TRNAE-CUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAE-CUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1188790..1188792),aa:Glu, seq:ctc)
SIO_010081: TRNAE-CUC
subclass of: SO_0000673
so part of: TRNAE-CUC
location: complement(1188754..1188825)
location: region:1188754-1188825:-1
so has part: feature:1188754-1188825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1188754-1188825:-1:exon

LOC116436898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: MAEHGPAGSLRAEASCPLCLGLFQDPVSIHCGHNFCRSCIERCWESSRESFPCPRCRETAPERSLRPNRELAKIIRIAQRLSLRGGSGRGERLCQRHGEALKLFCEQDQTPVCRVCRESQDHRLHAAVPIEEAAEEHKEKFQAHAQILKDRREKMLGLKAAEEGKSLHLLERVDAERQRVRSQVKELHQLLEEQEQLLLGRLAKLDREIVQRQEENISRLSEQVSSMGQQIQELEDKCRQPPWELLQDSRDILSRLEKQSALETVETSPELAEELTGLPQRNVTLKEMLKKFQVSLTLDPDTAHPRLALSEDGKCVRWEDTRRAVPDHPKRFDSSRCVLGREGFGSGRHYWEVQVGNGAAWAVGVAKESVRRKGRISVKPEVGIWAVGQCGSQCQALTSPTVPISLPETPEVVGVYLDYEAGRVAFFDSQRAIPMFTYPPTSFGGEQVLPLLCLGRGCQFTLSP
SIO_010081: LOC116436898
subclass of: SO_0000673
so part of: LOC116436898
location: complement(join(1189468..1189982,1190321..1190436,1191114..1191136,1191908..1192138,1192704..1192799,1193041..1193454))
location: region:1189468-1193454:-1
so has part: feature:1193041-1193454:-1:exon
so has part: feature:1192704-1192799:-1:exon
so has part: feature:1191908-1192138:-1:exon
so has part: feature:1191114-1191136:-1:exon
so has part: feature:1190321-1190436:-1:exon
so has part: feature:1189468-1189982:-1:exon

XP_031950232.1
type: Protein
SIO_000068: ncbiprotein

position:1189468:-1
position: 1189468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193454:-1
position: 1193454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193041-1193454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1192704-1192799:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191908-1192138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1191114-1191136:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1190321-1190436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1189468-1189982:-1:exon

LOC116436889
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1194906..1198409
location: region:1194906-1198409:1
so has part: feature:1194906-1198409:1:exon
subclass of: SO_0000010

116436889
type: Gene
SIO_000068: ncbigene

position:1194906:1
position: 1194906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198409:1
position: 1198409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194906-1198409:1:exon

LOC116436889
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436889
product: zinc finger protein RFP-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032094323.1
SIO_010081: LOC116436889
subclass of: SO_0000673
so part of: LOC116436889
location: join(1194906..1195605,1195971..1196066,1196213..1196443,1196578..1196750,1196977..1197092,1197435..1197464,1197635..1198409)
location: region:1194906-1198409:1
so has part: feature:1194906-1195605:1:exon
so has part: feature:1195971-1196066:1:exon
so has part: feature:1196213-1196443:1:exon
so has part: feature:1196578-1196750:1:exon
so has part: feature:1196977-1197092:1:exon
so has part: feature:1197435-1197464:1:exon
so has part: feature:1197635-1198409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194906-1195605:1:exon

position:1195605:1
position: 1195605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1195971-1196066:1:exon

position:1195971:1
position: 1195971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196066:1
position: 1196066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1196213-1196443:1:exon

position:1196213:1
position: 1196213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196443:1
position: 1196443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1196578-1196750:1:exon

position:1196578:1
position: 1196578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196750:1
position: 1196750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1196977-1197092:1:exon

position:1196977:1
position: 1196977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197092:1
position: 1197092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1197435-1197464:1:exon

position:1197435:1
position: 1197435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197464:1
position: 1197464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1197635-1198409:1:exon

position:1197635:1
position: 1197635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436889
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436889
product: zinc finger protein RFP-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032094324.1
SIO_010081: LOC116436889
subclass of: SO_0000673
so part of: LOC116436889
location: join(1194907..1195605,1195971..1196066,1196213..1196443,1196728..1196750,1196977..1197092,1197435..1197464,1197635..1198409)
location: region:1194907-1198409:1
so has part: feature:1194907-1195605:1:exon
so has part: feature:1195971-1196066:1:exon
so has part: feature:1196213-1196443:1:exon
so has part: feature:1196728-1196750:1:exon
so has part: feature:1196977-1197092:1:exon
so has part: feature:1197435-1197464:1:exon
so has part: feature:1197635-1198409:1:exon

position:1194907:1
position: 1194907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194907-1195605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195971-1196066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1196213-1196443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1196728-1196750:1:exon

position:1196728:1
position: 1196728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1196977-1197092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197435-1197464:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1197635-1198409:1:exon

LOC116436889
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM7-like isoform X1
translation: MDAPSARDALPGEASCPICLEYFRDPVSIHCGHHFCRSCIERCWEWPTAGFACPRCRDTAPERSLRPSRELARVLEIARRLSRGEALGTGEEEEEGCQKHREPLEVFCKEDGALLCAICRESRAHRSHTVLPVPEVVREYQGQIQAQLQTLKDDRDKIQEFREAEMRRSWEYLEKTEVERQRILSQFQGLHLSLEEHSRHLLARLGDLERDIGKVQEENVTSLTKEISRLDARIQELEEKCRQPARTFLQPCPAPDPNLVPQQFSRWLDPMGLENLFQCVSMILCDSVTHRVPSPFSPFQDINGTLSRLVKENLQLPLSPLPELEKKIHHFREENTLLEETLRSFQDILMFELPEKMTVTLDPSTAHPRLLVAPDGSSVSWESARDPPGDGPGTDAPADGPGPGTDPSVLGREGVTAGRRCWDVQVAPAGSWALGVARETPGSGGETPGSAEWELWSMGLCQGEFWALTSLERIPLFPIRAPRRVRVALDYERGQVAFFDADKRSLIFAFPAASFKGQSVHPWFLVWGEGSRITLCP
SIO_010081: LOC116436889
subclass of: SO_0000673
so part of: LOC116436889
location: join(1195183..1195605,1195971..1196066,1196213..1196443,1196578..1196750,1196977..1197092,1197435..1197464,1197635..1198179)
location: region:1195183-1198179:1
so has part: feature:1195183-1195605:1:exon
so has part: feature:1195971-1196066:1:exon
so has part: feature:1196213-1196443:1:exon
so has part: feature:1196578-1196750:1:exon
so has part: feature:1196977-1197092:1:exon
so has part: feature:1197435-1197464:1:exon
so has part: feature:1197635-1198179:1:exon

XP_031950214.1
type: Protein
SIO_000068: ncbiprotein

position:1195183:1
position: 1195183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198179:1
position: 1198179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195183-1195605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195971-1196066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1196213-1196443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1196578-1196750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1196977-1197092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197435-1197464:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1197635-1198179:1:exon

LOC116436889
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein RFP-like isoform X2
translation: MDAPSARDALPGEASCPICLEYFRDPVSIHCGHHFCRSCIERCWEWPTAGFACPRCRDTAPERSLRPSRELARVLEIARRLSRGEALGTGEEEEEGCQKHREPLEVFCKEDGALLCAICRESRAHRSHTVLPVPEVVREYQGQIQAQLQTLKDDRDKIQEFREAEMRRSWEYLEKTEVERQRILSQFQGLHLSLEEHSRHLLARLGDLERDIGKVQEENVTSLTKEISRLDARIQELEEKCRQPARTFLQDINGTLSRLVKENLQLPLSPLPELEKKIHHFREENTLLEETLRSFQDILMFELPEKMTVTLDPSTAHPRLLVAPDGSSVSWESARDPPGDGPGTDAPADGPGPGTDPSVLGREGVTAGRRCWDVQVAPAGSWALGVARETPGSGGETPGSAEWELWSMGLCQGEFWALTSLERIPLFPIRAPRRVRVALDYERGQVAFFDADKRSLIFAFPAASFKGQSVHPWFLVWGEGSRITLCP
SIO_010081: LOC116436889
subclass of: SO_0000673
so part of: LOC116436889
location: join(1195183..1195605,1195971..1196066,1196213..1196443,1196728..1196750,1196977..1197092,1197435..1197464,1197635..1198179)
location: region:1195183-1198179:1
so has part: feature:1195183-1195605:1:exon
so has part: feature:1195971-1196066:1:exon
so has part: feature:1196213-1196443:1:exon
so has part: feature:1196728-1196750:1:exon
so has part: feature:1196977-1197092:1:exon
so has part: feature:1197435-1197464:1:exon
so has part: feature:1197635-1198179:1:exon

XP_031950215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1195183-1195605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195971-1196066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1196213-1196443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1196728-1196750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1196977-1197092:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197435-1197464:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1197635-1198179:1:exon

LOC116436893
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1203446..1207807)
location: region:1203446-1207807:-1
so has part: feature:1203446-1207807:-1:exon
subclass of: SO_0000010

116436893
type: Gene
SIO_000068: ncbigene

position:1203446:-1
position: 1203446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207807:-1
position: 1207807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203446-1207807:-1:exon

LOC116436893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436893
product: E3 ubiquitin-protein ligase TRIM11-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032094329.1
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203446..1204370,1204679..1204771,1205230..1205345,1205629..1205651,1205946..1206176,1206444..1206536,1207153..1207622,1207729..1207807))
location: region:1203446-1207807:-1
so has part: feature:1207729-1207807:-1:exon
so has part: feature:1207153-1207622:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205946-1206176:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1204679-1204771:-1:exon
so has part: feature:1203446-1204370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1207729-1207807:-1:exon

position:1207729:-1
position: 1207729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1207153-1207622:-1:exon

position:1207153:-1
position: 1207153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207622:-1
position: 1207622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1206444-1206536:-1:exon

position:1206444:-1
position: 1206444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206536:-1
position: 1206536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1205946-1206176:-1:exon

position:1205946:-1
position: 1205946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206176:-1
position: 1206176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1205629-1205651:-1:exon

position:1205629:-1
position: 1205629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205651:-1
position: 1205651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1205230-1205345:-1:exon

position:1205230:-1
position: 1205230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205345:-1
position: 1205345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1204679-1204771:-1:exon

position:1204679:-1
position: 1204679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204771:-1
position: 1204771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1203446-1204370:-1:exon

position:1204370:-1
position: 1204370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436893
product: E3 ubiquitin-protein ligase TRIM11-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032094331.1
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203446..1204370,1204679..1204771,1205230..1205345,1205629..1205651,1205946..1206176,1206444..1206536,1207153..1207622,1207715..1207731))
location: region:1203446-1207731:-1
so has part: feature:1207715-1207731:-1:exon
so has part: feature:1207153-1207622:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205946-1206176:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1204679-1204771:-1:exon
so has part: feature:1203446-1204370:-1:exon

position:1207731:-1
position: 1207731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207715-1207731:-1:exon

position:1207715:-1
position: 1207715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1207153-1207622:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205946-1206176:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204679-1204771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1203446-1204370:-1:exon

LOC116436893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436893
product: E3 ubiquitin-protein ligase TRIM11-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032094335.1
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203446..1204370,1204679..1204771,1205230..1205345,1205629..1205651,1206444..1206536,1207153..1207699))
location: region:1203446-1207699:-1
so has part: feature:1207153-1207699:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1204679-1204771:-1:exon
so has part: feature:1203446-1204370:-1:exon

position:1207699:-1
position: 1207699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207153-1207699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1204679-1204771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1203446-1204370:-1:exon

LOC116436893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436893
product: E3 ubiquitin-protein ligase TRIM11-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032094332.1
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203446..1204370,1204679..1204771,1205230..1205345,1205629..1205651,1205946..1206131,1206444..1206536,1207153..1207699))
location: region:1203446-1207699:-1
so has part: feature:1207153-1207699:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205946-1206131:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1204679-1204771:-1:exon
so has part: feature:1203446-1204370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1207153-1207699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205946-1206131:-1:exon

position:1206131:-1
position: 1206131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204679-1204771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1203446-1204370:-1:exon

LOC116436893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436893
product: E3 ubiquitin-protein ligase TRIM11-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032094334.1
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203446..1204370,1205230..1205345,1205629..1205651,1205946..1206176,1206444..1206536,1207153..1207699))
location: region:1203446-1207699:-1
so has part: feature:1207153-1207699:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205946-1206176:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1203446-1204370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1207153-1207699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205946-1206176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1203446-1204370:-1:exon

LOC116436893
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436893
product: E3 ubiquitin-protein ligase TRIM11-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_032094333.1
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203446..1204370,1204679..1204708,1205230..1205345,1205629..1205651,1205946..1206176,1206444..1206536,1207153..1207699))
location: region:1203446-1207699:-1
so has part: feature:1207153-1207699:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205946-1206176:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1204679-1204708:-1:exon
so has part: feature:1203446-1204370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1207153-1207699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205946-1206176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204679-1204708:-1:exon

position:1204708:-1
position: 1204708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1203446-1204370:-1:exon

LOC116436893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM11-like isoform X5
translation: MAEPSLAEQLRAEASCPVCLELFQDPVSVPCGHNFCRGCIERCWESSRGSFCCPRCRNVAPERGLRPSRELGHVADIARGLLPGVPGTLCRRHREPLQLFCREERALLCLVCSRSRAHWLHRVVPAEEAAQEYKEQIQSCLQALKEEREKYLESQKSSGRRSLHLDIRQLLDSCERMKFHPPAEISSDLERSLEDFVQRNILVRGTLRRCQGGPSHGMKVLSDPESVTSLFSDSLMFQLQEPANVTLDPSTAHPNLQLSEDGKEVRGQLVPRDVPDHPERFDFEPCVLARGGFASGRHFWEVEVGQGGVWALGVVRESARRRGPLSLTPKEGVWALEAFHSLTSPRANLRLHPPPRRLRVSLDYEGRRVAFFSAGDDIPILEYTRAAFNGERVLPWFKMGMGARLLEVTRSPRCEDRGVAGRFMSPLDWVGFGFSLRICP
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203775..1204370,1204679..1204771,1205230..1205345,1205629..1205651,1206444..1206536,1207153..1207554))
location: region:1203775-1207554:-1
so has part: feature:1207153-1207554:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1204679-1204771:-1:exon
so has part: feature:1203775-1204370:-1:exon

XP_031950226.1
type: Protein
SIO_000068: ncbiprotein

position:1203775:-1
position: 1203775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207554:-1
position: 1207554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207153-1207554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1204679-1204771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1203775-1204370:-1:exon

LOC116436893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM11-like isoform X2
translation: MAEPSLAEQLRAEASCPVCLELFQDPVSVPCGHNFCRGCIERCWESSRGSFCCPRCRNVAPERGLRPSRELGHVADIARGLLPGVPGTLCRRHREPLQLFCREERALLCLVCSRSRAHWLHRVVPAEEAAQEYKEQIQSCLQALKEEREKYLESQKSSGRRSLHLELRRFLEEQERLLLVQLGDLDRAIGRAQDEALAKVSEELSQLDTLIWEMEGKFQQPPSHFLQDIRQLLDSCERMKFHPPAEISSDLERSLEDFVQRNILVRGTLRRCQGGPSHGMKVLSDPESVTSLFSDSLMFQLQEPANVTLDPSTAHPNLQLSEDGKEVRGQLVPRDVPDHPERFDFEPCVLARGGFASGRHFWEVEVGQGGVWALGVVRESARRRGPLSLTPKEGVWALEAFHSLTSPRANLRLHPPPRRLRVSLDYEGRRVAFFSAGDDIPILEYTRAAFNGERVLPWFKMGMGARLLEVTRSPRCEDRGVAGRFMSPLDWVGFGFSLRICP
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203775..1204370,1204679..1204771,1205230..1205345,1205629..1205651,1205946..1206131,1206444..1206536,1207153..1207554))
location: region:1203775-1207554:-1
so has part: feature:1207153-1207554:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205946-1206131:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1204679-1204771:-1:exon
so has part: feature:1203775-1204370:-1:exon

XP_031950223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1207153-1207554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205946-1206131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204679-1204771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1203775-1204370:-1:exon

LOC116436893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM11-like isoform X4
translation: MAEPSLAEQLRAEASCPVCLELFQDPVSVPCGHNFCRGCIERCWESSRGSFCCPRCRNVAPERGLRPSRELGHVADIARGLLPGVPGTLCRRHREPLQLFCREERALLCLVCSRSRAHWLHRVVPAEEAAQEYKEQIQSCLQALKEEREKYLESQKSSGRRSLHLDKTRSEGQRMVWEFQELRRFLEEQERLLLVQLGDLDRAIGRAQDEALAKVSEELSQLDTLIWEMEGKFQQPPSHFLQDIRQLLDSCERMKFHPPAEISSDLERSLEDFVQRNILVRGTLRRCQANVTLDPSTAHPNLQLSEDGKEVRGQLVPRDVPDHPERFDFEPCVLARGGFASGRHFWEVEVGQGGVWALGVVRESARRRGPLSLTPKEGVWALEAFHSLTSPRANLRLHPPPRRLRVSLDYEGRRVAFFSAGDDIPILEYTRAAFNGERVLPWFKMGMGARLLEVTRSPRCEDRGVAGRFMSPLDWVGFGFSLRICP
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203775..1204370,1205230..1205345,1205629..1205651,1205946..1206176,1206444..1206536,1207153..1207554))
location: region:1203775-1207554:-1
so has part: feature:1207153-1207554:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205946-1206176:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1203775-1204370:-1:exon

XP_031950225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1207153-1207554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205946-1206176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1203775-1204370:-1:exon

LOC116436893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM11-like isoform X3
translation: MAEPSLAEQLRAEASCPVCLELFQDPVSVPCGHNFCRGCIERCWESSRGSFCCPRCRNVAPERGLRPSRELGHVADIARGLLPGVPGTLCRRHREPLQLFCREERALLCLVCSRSRAHWLHRVVPAEEAAQEYKEQIQSCLQALKEEREKYLESQKSSGRRSLHLDKTRSEGQRMVWEFQELRRFLEEQERLLLVQLGDLDRAIGRAQDEALAKVSEELSQLDTLIWEMEGKFQQPPSHFLQDIRQLLDSCERMKFHPPAEISSDLERSLEDFVQRNILVRGTLRRCQDSLMFQLQEPANVTLDPSTAHPNLQLSEDGKEVRGQLVPRDVPDHPERFDFEPCVLARGGFASGRHFWEVEVGQGGVWALGVVRESARRRGPLSLTPKEGVWALEAFHSLTSPRANLRLHPPPRRLRVSLDYEGRRVAFFSAGDDIPILEYTRAAFNGERVLPWFKMGMGARLLEVTRSPRCEDRGVAGRFMSPLDWVGFGFSLRICP
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203775..1204370,1204679..1204708,1205230..1205345,1205629..1205651,1205946..1206176,1206444..1206536,1207153..1207554))
location: region:1203775-1207554:-1
so has part: feature:1207153-1207554:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205946-1206176:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1204679-1204708:-1:exon
so has part: feature:1203775-1204370:-1:exon

XP_031950224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1207153-1207554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205946-1206176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204679-1204708:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1203775-1204370:-1:exon

LOC116436893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM11-like isoform X1
translation: MAEPSLAEQLRAEASCPVCLELFQDPVSVPCGHNFCRGCIERCWESSRGSFCCPRCRNVAPERGLRPSRELGHVADIARGLLPGVPGTLCRRHREPLQLFCREERALLCLVCSRSRAHWLHRVVPAEEAAQEYKEQIQSCLQALKEEREKYLESQKSSGRRSLHLDKTRSEGQRMVWEFQELRRFLEEQERLLLVQLGDLDRAIGRAQDEALAKVSEELSQLDTLIWEMEGKFQQPPSHFLQDIRQLLDSCERMKFHPPAEISSDLERSLEDFVQRNILVRGTLRRCQGGPSHGMKVLSDPESVTSLFSDSLMFQLQEPANVTLDPSTAHPNLQLSEDGKEVRGQLVPRDVPDHPERFDFEPCVLARGGFASGRHFWEVEVGQGGVWALGVVRESARRRGPLSLTPKEGVWALEAFHSLTSPRANLRLHPPPRRLRVSLDYEGRRVAFFSAGDDIPILEYTRAAFNGERVLPWFKMGMGARLLEVTRSPRCEDRGVAGRFMSPLDWVGFGFSLRICP
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203775..1204370,1204679..1204771,1205230..1205345,1205629..1205651,1205946..1206176,1206444..1206536,1207153..1207554))
location: region:1203775-1207554:-1
so has part: feature:1207153-1207554:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205946-1206176:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1204679-1204771:-1:exon
so has part: feature:1203775-1204370:-1:exon

XP_031950220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1207153-1207554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205946-1206176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204679-1204771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1203775-1204370:-1:exon

LOC116436893
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM11-like isoform X1
translation: MAEPSLAEQLRAEASCPVCLELFQDPVSVPCGHNFCRGCIERCWESSRGSFCCPRCRNVAPERGLRPSRELGHVADIARGLLPGVPGTLCRRHREPLQLFCREERALLCLVCSRSRAHWLHRVVPAEEAAQEYKEQIQSCLQALKEEREKYLESQKSSGRRSLHLDKTRSEGQRMVWEFQELRRFLEEQERLLLVQLGDLDRAIGRAQDEALAKVSEELSQLDTLIWEMEGKFQQPPSHFLQDIRQLLDSCERMKFHPPAEISSDLERSLEDFVQRNILVRGTLRRCQGGPSHGMKVLSDPESVTSLFSDSLMFQLQEPANVTLDPSTAHPNLQLSEDGKEVRGQLVPRDVPDHPERFDFEPCVLARGGFASGRHFWEVEVGQGGVWALGVVRESARRRGPLSLTPKEGVWALEAFHSLTSPRANLRLHPPPRRLRVSLDYEGRRVAFFSAGDDIPILEYTRAAFNGERVLPWFKMGMGARLLEVTRSPRCEDRGVAGRFMSPLDWVGFGFSLRICP
SIO_010081: LOC116436893
subclass of: SO_0000673
so part of: LOC116436893
location: complement(join(1203775..1204370,1204679..1204771,1205230..1205345,1205629..1205651,1205946..1206176,1206444..1206536,1207153..1207554))
location: region:1203775-1207554:-1
so has part: feature:1207153-1207554:-1:exon
so has part: feature:1206444-1206536:-1:exon
so has part: feature:1205946-1206176:-1:exon
so has part: feature:1205629-1205651:-1:exon
so has part: feature:1205230-1205345:-1:exon
so has part: feature:1204679-1204771:-1:exon
so has part: feature:1203775-1204370:-1:exon

XP_031950222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1207153-1207554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1206444-1206536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1205946-1206176:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1205629-1205651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205230-1205345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204679-1204771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1203775-1204370:-1:exon

LOC116436959
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436959
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1206208..1207002
location: region:1206208-1207002:1
so has part: feature:1206208-1207002:1:exon
subclass of: SO_0000011

116436959
type: Gene
SIO_000068: ncbigene

position:1206208:1
position: 1206208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1207002:1
position: 1207002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206208-1207002:1:exon

LOC116436959
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436959
product: uncharacterized LOC116436959
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004237128.1
SIO_010081: LOC116436959
subclass of: SO_0000673
so part of: LOC116436959
location: join(1206208..1206553,1206963..1207002)
location: region:1206208-1207002:1
so has part: feature:1206208-1206553:1:exon
so has part: feature:1206963-1207002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1206208-1206553:1:exon

position:1206553:1
position: 1206553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1206963-1207002:1:exon

position:1206963:1
position: 1206963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1208267..1208339)
location: region:1208267-1208339:-1
so has part: feature:1208267-1208339:-1:exon
subclass of: SO_0000663

116436981
type: Gene
SIO_000068: ncbigene

position:1208267:-1
position: 1208267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208339:-1
position: 1208339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1208267-1208339:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1208304..1208306),aa:Val, seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(1208267..1208339)
location: region:1208267-1208339:-1
so has part: feature:1208267-1208339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1208267-1208339:-1:exon

TRIM41
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1209095..1213751
location: region:1209095-1213751:1
so has part: feature:1209095-1213751:1:exon
subclass of: SO_0000010

116436884
type: Gene
SIO_000068: ncbigene

position:1209095:1
position: 1209095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213751:1
position: 1213751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209095-1213751:1:exon

TRIM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TRIM41
product: tripartite motif containing 41
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_032094311.1
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: join(1209095..1210067,1210460..1210555,1210973..1211203,1211457..1211479,1211686..1211813,1212260..1212939,1213570..1213751)
location: region:1209095-1213751:1
so has part: feature:1209095-1210067:1:exon
so has part: feature:1210460-1210555:1:exon
so has part: feature:1210973-1211203:1:exon
so has part: feature:1211457-1211479:1:exon
so has part: feature:1211686-1211813:1:exon
so has part: feature:1212260-1212939:1:exon
so has part: feature:1213570-1213751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1209095-1210067:1:exon

position:1210067:1
position: 1210067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1210460-1210555:1:exon

position:1210460:1
position: 1210460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1210555:1
position: 1210555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1210973-1211203:1:exon

position:1210973:1
position: 1210973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211203:1
position: 1211203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1211457-1211479:1:exon

position:1211457:1
position: 1211457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211479:1
position: 1211479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1211686-1211813:1:exon

position:1211686:1
position: 1211686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1211813:1
position: 1211813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1212260-1212939:1:exon

position:1212260:1
position: 1212260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212939:1
position: 1212939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1213570-1213751:1:exon

position:1213570:1
position: 1213570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TRIM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM41
translation: MAAPAALGGPGSRPDPVETLQEEAICAICLDYFADPVSIGCGHNFCRGCISRLWARGGPEPPPGGSEGGSELEEDEDEDELEEDELDVEQEEEEDEAGVDEEEDDDMWEEEEEEEAELWEDPAEDEEEEEEEEATAWAGGAQGGLYFGDEDFDEDVMEEDVEEEEEAEEEEEDEEEQPPPPAPPRRPPVFTCPQCRKTFLQRSFRPNLQLANMVQIIRQLHPRPQRPAGPGPGPAAAPGGPPELCEKHQEPLKLFCEVDEAAICVVCREARGHKHHSVVPLDEVVQDCKNKLQSHLEPLRKQLDAVLKQKSSEEEKISVLREQMQVEMQELEADFEVLHRFLAGEQVLLLRQLQERHEALLARQRRNLGALEERSSALRRLIADAEAAGRQDGLQLLKDIKGTFIRCENIKFQEPEMVPVDVGKKFRNCFLQDVVMRKMEKVFSKVPQADVTLDPSTAHPRLSLSLDRRSVRLSERRQEPAGSARRSDGDLCVLGAPGFSAGRHYWEVEVGGRRGWAVGAARETTRHRHKGASGGSSPAPKREIWAVGTSGKKYQALTATEQTALAPGEQPRRFGVYLDYERGQLCFYNAESMSHIHTFHICCRERVFPFFRILAKGTRIKICT
SIO_010081: TRIM41
subclass of: SO_0000673
so part of: TRIM41
location: join(1209201..1210067,1210460..1210555,1210973..1211203,1211457..1211479,1211686..1211813,1212260..1212789)
location: region:1209201-1212789:1
so has part: feature:1209201-1210067:1:exon
so has part: feature:1210460-1210555:1:exon
so has part: feature:1210973-1211203:1:exon
so has part: feature:1211457-1211479:1:exon
so has part: feature:1211686-1211813:1:exon
so has part: feature:1212260-1212789:1:exon

XP_031950202.1
type: Protein
SIO_000068: ncbiprotein

position:1209201:1
position: 1209201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212789:1
position: 1212789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209201-1210067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1210460-1210555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1210973-1211203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1211457-1211479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1211686-1211813:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1212260-1212789:1:exon

RACK1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: RACK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1214277..1217451)
location: region:1214277-1217451:-1
so has part: feature:1214277-1217451:-1:exon
subclass of: SO_0000010

116436915
type: Gene
SIO_000068: ncbigene

position:1214277:-1
position: 1214277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217451:-1
position: 1217451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214277-1217451:-1:exon

RACK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RACK1
product: receptor for activated C kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 86 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_032094363.1
SIO_010081: RACK1
subclass of: SO_0000673
so part of: RACK1
location: complement(join(1214277..1214394,1214623..1214733,1214957..1215097,1215512..1215622,1215703..1215798,1215936..1216083,1216727..1216898,1217239..1217451))
location: region:1214277-1217451:-1
so has part: feature:1217239-1217451:-1:exon
so has part: feature:1216727-1216898:-1:exon
so has part: feature:1215936-1216083:-1:exon
so has part: feature:1215703-1215798:-1:exon
so has part: feature:1215512-1215622:-1:exon
so has part: feature:1214957-1215097:-1:exon
so has part: feature:1214623-1214733:-1:exon
so has part: feature:1214277-1214394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1217239-1217451:-1:exon

position:1217239:-1
position: 1217239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1216727-1216898:-1:exon

position:1216727:-1
position: 1216727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216898:-1
position: 1216898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1215936-1216083:-1:exon

position:1215936:-1
position: 1215936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216083:-1
position: 1216083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1215703-1215798:-1:exon

position:1215703:-1
position: 1215703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215798:-1
position: 1215798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1215512-1215622:-1:exon

position:1215512:-1
position: 1215512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215622:-1
position: 1215622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1214957-1215097:-1:exon

position:1214957:-1
position: 1214957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215097:-1
position: 1215097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1214623-1214733:-1:exon

position:1214623:-1
position: 1214623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214733:-1
position: 1214733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1214277-1214394:-1:exon

position:1214394:-1
position: 1214394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RACK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RACK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor of activated protein C kinase 1
translation: MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDVINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
SIO_010081: RACK1
subclass of: SO_0000673
so part of: RACK1
location: complement(join(1214329..1214394,1214623..1214733,1214957..1215097,1215512..1215622,1215703..1215798,1215936..1216083,1216727..1216898,1217239..1217347))
location: region:1214329-1217347:-1
so has part: feature:1217239-1217347:-1:exon
so has part: feature:1216727-1216898:-1:exon
so has part: feature:1215936-1216083:-1:exon
so has part: feature:1215703-1215798:-1:exon
so has part: feature:1215512-1215622:-1:exon
so has part: feature:1214957-1215097:-1:exon
so has part: feature:1214623-1214733:-1:exon
so has part: feature:1214329-1214394:-1:exon

XP_031950254.1
type: Protein
SIO_000068: ncbiprotein

position:1214329:-1
position: 1214329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217347:-1
position: 1217347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217239-1217347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216727-1216898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215936-1216083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215703-1215798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1215512-1215622:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1214957-1215097:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1214623-1214733:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1214329-1214394:-1:exon

LOC116436871
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1217473..1230034
location: region:1217473-1230034:1
so has part: feature:1217473-1230034:1:exon
subclass of: SO_0000010

116436871
type: Gene
SIO_000068: ncbigene

position:1217473:1
position: 1217473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230034:1
position: 1230034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217473-1230034:1:exon

LOC116436871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436871
product: E3 ubiquitin/ISG15 ligase TRIM25-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094290.1
SIO_010081: LOC116436871
subclass of: SO_0000673
so part of: LOC116436871
location: join(1217473..1217983,1218785..1218840,1219135..1219152,1219440..1219460,1219546..1219566,1219664..1219681,1219905..1219925,1220312..1220332,1220625..1220729,1220832..1220852,1221062..1221082,1221510..1221530,1221721..1221741,1221929..1221949,1222066..1222086,1222489..1222509,1223014..1223034,1223106..1223126,1223337..1223357,1223453..1223473,1223610..1223630,1223756..1223776,1223917..1224047,1224270..1224333,1224595..1224615,1224842..1224862,1225284..1225304,1225538..1225558,1225802..1225821,1226112..1226208,1226504..1226524,1226739..1226759,1226841..1226861,1227223..1227243,1227353..1227373,1227661..1227681,1227769..1227789,1227901..1227921,1228095..1228115,1228213..1228233,1228595..1230034)
location: region:1217473-1230034:1
so has part: feature:1217473-1217983:1:exon
so has part: feature:1218785-1218840:1:exon
so has part: feature:1219135-1219152:1:exon
so has part: feature:1219440-1219460:1:exon
so has part: feature:1219546-1219566:1:exon
so has part: feature:1219664-1219681:1:exon
so has part: feature:1219905-1219925:1:exon
so has part: feature:1220312-1220332:1:exon
so has part: feature:1220625-1220729:1:exon
so has part: feature:1220832-1220852:1:exon
so has part: feature:1221062-1221082:1:exon
so has part: feature:1221510-1221530:1:exon
so has part: feature:1221721-1221741:1:exon
so has part: feature:1221929-1221949:1:exon
so has part: feature:1222066-1222086:1:exon
so has part: feature:1222489-1222509:1:exon
so has part: feature:1223014-1223034:1:exon
so has part: feature:1223106-1223126:1:exon
so has part: feature:1223337-1223357:1:exon
so has part: feature:1223453-1223473:1:exon
so has part: feature:1223610-1223630:1:exon
so has part: feature:1223756-1223776:1:exon
so has part: feature:1223917-1224047:1:exon
so has part: feature:1224270-1224333:1:exon
so has part: feature:1224595-1224615:1:exon
so has part: feature:1224842-1224862:1:exon
so has part: feature:1225284-1225304:1:exon
so has part: feature:1225538-1225558:1:exon
so has part: feature:1225802-1225821:1:exon
so has part: feature:1226112-1226208:1:exon
so has part: feature:1226504-1226524:1:exon
so has part: feature:1226739-1226759:1:exon
so has part: feature:1226841-1226861:1:exon
so has part: feature:1227223-1227243:1:exon
so has part: feature:1227353-1227373:1:exon
so has part: feature:1227661-1227681:1:exon
so has part: feature:1227769-1227789:1:exon
so has part: feature:1227901-1227921:1:exon
so has part: feature:1228095-1228115:1:exon
so has part: feature:1228213-1228233:1:exon
so has part: feature:1228595-1230034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1217473-1217983:1:exon

position:1217983:1
position: 1217983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1218785-1218840:1:exon

position:1218785:1
position: 1218785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218840:1
position: 1218840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1219135-1219152:1:exon

position:1219135:1
position: 1219135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219152:1
position: 1219152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1219440-1219460:1:exon

position:1219440:1
position: 1219440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219460:1
position: 1219460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1219546-1219566:1:exon

position:1219546:1
position: 1219546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219566:1
position: 1219566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1219664-1219681:1:exon

position:1219664:1
position: 1219664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219681:1
position: 1219681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1219905-1219925:1:exon

position:1219905:1
position: 1219905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219925:1
position: 1219925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1220312-1220332:1:exon

position:1220312:1
position: 1220312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220332:1
position: 1220332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1220625-1220729:1:exon

position:1220625:1
position: 1220625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220729:1
position: 1220729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1220832-1220852:1:exon

position:1220832:1
position: 1220832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220852:1
position: 1220852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1221062-1221082:1:exon

position:1221062:1
position: 1221062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221082:1
position: 1221082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1221510-1221530:1:exon

position:1221510:1
position: 1221510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221530:1
position: 1221530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1221721-1221741:1:exon

position:1221721:1
position: 1221721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221741:1
position: 1221741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1221929-1221949:1:exon

position:1221929:1
position: 1221929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221949:1
position: 1221949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1222066-1222086:1:exon

position:1222066:1
position: 1222066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222086:1
position: 1222086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1222489-1222509:1:exon

position:1222489:1
position: 1222489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222509:1
position: 1222509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1223014-1223034:1:exon

position:1223014:1
position: 1223014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223034:1
position: 1223034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1223106-1223126:1:exon

position:1223106:1
position: 1223106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223126:1
position: 1223126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1223337-1223357:1:exon

position:1223337:1
position: 1223337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223357:1
position: 1223357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1223453-1223473:1:exon

position:1223453:1
position: 1223453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223473:1
position: 1223473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1223610-1223630:1:exon

position:1223610:1
position: 1223610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223630:1
position: 1223630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1223756-1223776:1:exon

position:1223756:1
position: 1223756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223776:1
position: 1223776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1223917-1224047:1:exon

position:1223917:1
position: 1223917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224047:1
position: 1224047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1224270-1224333:1:exon

position:1224270:1
position: 1224270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224333:1
position: 1224333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1224595-1224615:1:exon

position:1224595:1
position: 1224595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224615:1
position: 1224615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1224842-1224862:1:exon

position:1224842:1
position: 1224842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224862:1
position: 1224862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1225284-1225304:1:exon

position:1225284:1
position: 1225284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225304:1
position: 1225304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1225538-1225558:1:exon

position:1225538:1
position: 1225538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225558:1
position: 1225558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1225802-1225821:1:exon

position:1225802:1
position: 1225802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225821:1
position: 1225821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1226112-1226208:1:exon

position:1226112:1
position: 1226112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226208:1
position: 1226208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1226504-1226524:1:exon

position:1226504:1
position: 1226504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226524:1
position: 1226524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1226739-1226759:1:exon

position:1226739:1
position: 1226739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226759:1
position: 1226759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1226841-1226861:1:exon

position:1226841:1
position: 1226841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226861:1
position: 1226861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1227223-1227243:1:exon

position:1227223:1
position: 1227223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227243:1
position: 1227243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1227353-1227373:1:exon

position:1227353:1
position: 1227353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227373:1
position: 1227373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1227661-1227681:1:exon

position:1227661:1
position: 1227661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227681:1
position: 1227681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1227769-1227789:1:exon

position:1227769:1
position: 1227769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227789:1
position: 1227789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1227901-1227921:1:exon

position:1227901:1
position: 1227901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227921:1
position: 1227921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1228095-1228115:1:exon

position:1228095:1
position: 1228095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228115:1
position: 1228115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1228213-1228233:1:exon

position:1228213:1
position: 1228213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228233:1
position: 1228233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1228595-1230034:1:exon

position:1228595:1
position: 1228595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like
translation: MDRRISPEDPNIPPQKITMYPPKDPNIPPEESQYPPRGPQSHCGWRVAWADPCSCSQPEDPVPSMAISGSSSPAKFRIGIGSSSAVAAPPQAPGPSSRLKPPLPTPKPTPGEQPRGWPTERPKPILAGNNTMMEPGENTALDEWDTQIRKLPEEFESDTELEECDTENGELAAEIDKGQFGAGWVEFPRKSRVYSPLPSLFFPEHLTATLEERDRRISKLTSDLGESNAKLKERDRKITKLAAEIRRLTALLAERDSGLRKLRAELAKCDATIRIFTVELGERHTKIGELTADVEVFKKKLQQHEAELGEEFSLLFWGIFHENLMGFRGKSGFSLSLEVQVQKLKRFKIIIYFNPFIPLGENEAEIRHLKELLEEKELAAREQDSVIRKLREELEALKEGEEEEEEEEEEEEEEEKEEEEEEEEKEPVELGEQGKVMEDPGEVDKNLEELRAALGDRDARIAELSEALEQRDRQIAELNTELEESRIRIWWCLEEHRKEEEKVARVTLDPLTSHPRLVLSPDGLGARWAYGGPEPPAGPERFTAAPCALGTPGFTSGRHTWTVDVAEGPFCAVGVSRESVPRQGPAFGPGDGVWALQRWGGLGRALTSPPTPLPLPRVPRRLRVALDYDGGRVAFFDGDSRSPTPLFAFPATAFAGERVRPWFWLELGEISIVQ
SIO_010081: LOC116436871
subclass of: SO_0000673
so part of: LOC116436871
location: join(1217634..1217983,1218785..1218840,1219135..1219152,1219440..1219460,1219546..1219566,1219664..1219681,1219905..1219925,1220312..1220332,1220625..1220729,1220832..1220852,1221062..1221082,1221510..1221530,1221721..1221741,1221929..1221949,1222066..1222086,1222489..1222509,1223014..1223034,1223106..1223126,1223337..1223357,1223453..1223473,1223610..1223630,1223756..1223776,1223917..1224047,1224270..1224333,1224595..1224615,1224842..1224862,1225284..1225304,1225538..1225558,1225802..1225821,1226112..1226208,1226504..1226524,1226739..1226759,1226841..1226861,1227223..1227243,1227353..1227373,1227661..1227681,1227769..1227789,1227901..1227921,1228095..1228115,1228213..1228233,1228595..1229109)
location: region:1217634-1229109:1
so has part: feature:1217634-1217983:1:exon
so has part: feature:1218785-1218840:1:exon
so has part: feature:1219135-1219152:1:exon
so has part: feature:1219440-1219460:1:exon
so has part: feature:1219546-1219566:1:exon
so has part: feature:1219664-1219681:1:exon
so has part: feature:1219905-1219925:1:exon
so has part: feature:1220312-1220332:1:exon
so has part: feature:1220625-1220729:1:exon
so has part: feature:1220832-1220852:1:exon
so has part: feature:1221062-1221082:1:exon
so has part: feature:1221510-1221530:1:exon
so has part: feature:1221721-1221741:1:exon
so has part: feature:1221929-1221949:1:exon
so has part: feature:1222066-1222086:1:exon
so has part: feature:1222489-1222509:1:exon
so has part: feature:1223014-1223034:1:exon
so has part: feature:1223106-1223126:1:exon
so has part: feature:1223337-1223357:1:exon
so has part: feature:1223453-1223473:1:exon
so has part: feature:1223610-1223630:1:exon
so has part: feature:1223756-1223776:1:exon
so has part: feature:1223917-1224047:1:exon
so has part: feature:1224270-1224333:1:exon
so has part: feature:1224595-1224615:1:exon
so has part: feature:1224842-1224862:1:exon
so has part: feature:1225284-1225304:1:exon
so has part: feature:1225538-1225558:1:exon
so has part: feature:1225802-1225821:1:exon
so has part: feature:1226112-1226208:1:exon
so has part: feature:1226504-1226524:1:exon
so has part: feature:1226739-1226759:1:exon
so has part: feature:1226841-1226861:1:exon
so has part: feature:1227223-1227243:1:exon
so has part: feature:1227353-1227373:1:exon
so has part: feature:1227661-1227681:1:exon
so has part: feature:1227769-1227789:1:exon
so has part: feature:1227901-1227921:1:exon
so has part: feature:1228095-1228115:1:exon
so has part: feature:1228213-1228233:1:exon
so has part: feature:1228595-1229109:1:exon

XP_031950181.1
type: Protein
SIO_000068: ncbiprotein

position:1217634:1
position: 1217634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229109:1
position: 1229109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217634-1217983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1218785-1218840:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1219135-1219152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1219440-1219460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1219546-1219566:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1219664-1219681:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1219905-1219925:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1220312-1220332:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1220625-1220729:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1220832-1220852:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1221062-1221082:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1221510-1221530:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1221721-1221741:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1221929-1221949:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1222066-1222086:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1222489-1222509:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1223014-1223034:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1223106-1223126:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1223337-1223357:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1223453-1223473:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1223610-1223630:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1223756-1223776:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1223917-1224047:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1224270-1224333:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1224595-1224615:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1224842-1224862:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1225284-1225304:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1225538-1225558:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1225802-1225821:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1226112-1226208:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1226504-1226524:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1226739-1226759:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1226841-1226861:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1227223-1227243:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1227353-1227373:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1227661-1227681:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1227769-1227789:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1227901-1227921:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1228095-1228115:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1228213-1228233:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1228595-1229109:1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1230248..1230329
location: region:1230248-1230329:1
so has part: feature:1230248-1230329:1:exon
subclass of: SO_0000663

116436984
type: Gene
SIO_000068: ncbigene

position:1230248:1
position: 1230248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230329:1
position: 1230329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230248-1230329:1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 1196302
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1230282..1230284,aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: 1230248..1230329
location: region:1230248-1230329:1
so has part: feature:1230248-1230329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1230248-1230329:1:exon

LOC116436872
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1230635..1233994)
location: region:1230635-1233994:-1
so has part: feature:1230635-1233994:-1:exon
subclass of: SO_0000010

116436872
type: Gene
SIO_000068: ncbigene

position:1230635:-1
position: 1230635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233994:-1
position: 1233994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1230635-1233994:-1:exon

LOC116436872
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436872
product: zinc finger protein 771-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094291.1
SIO_010081: LOC116436872
subclass of: SO_0000673
so part of: LOC116436872
location: complement(join(1230635..1232322,1233239..1233299,1233980..1233994))
location: region:1230635-1233994:-1
so has part: feature:1233980-1233994:-1:exon
so has part: feature:1233239-1233299:-1:exon
so has part: feature:1230635-1232322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1233980-1233994:-1:exon

position:1233980:-1
position: 1233980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1233239-1233299:-1:exon

position:1233239:-1
position: 1233239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233299:-1
position: 1233299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1230635-1232322:-1:exon

position:1232322:-1
position: 1232322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436872
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 771-like
translation: MTEPQVPEVLQEVTVTTERPPGSPEDDGWPSAAEAESSRDGFEDAEDPRGTPRRDPPDPVRPTCELCGKSFTSDSSLSRHLRAHPGGAPFSCFRCRSAFPCGAALREHLGTPCQPRPHKCRSCPKRFASARSLQKHRRVHLDGALSCPDCGKTLMSKASLVTHRRIHTGERPFACPDCGKSFMATKSLSKHRQSQHSAGGFICTDCGKSLSSHPALVTHRRIHTGERPYECPDCGKGFMAVKSLSKHRKSHRDGAARAAPAPCPECGDSGAAAPCPHRRRPLGDSPERGAGVPAAPPAPLRPLGDSPEVPAAPPAPLRPLRCPRHACEDCGKAFRDGAALRRHRRIHTGEKPYGCTECGKSFRASSSLVIHRRIHTGEKPYPCSHCAKSFMSRSSLMKHLRTHLRKELPEGPRP
SIO_010081: LOC116436872
subclass of: SO_0000673
so part of: LOC116436872
location: complement(join(1231154..1232322,1233239..1233299,1233980..1233994))
location: region:1231154-1233994:-1
so has part: feature:1233980-1233994:-1:exon
so has part: feature:1233239-1233299:-1:exon
so has part: feature:1231154-1232322:-1:exon

XP_031950182.1
type: Protein
SIO_000068: ncbiprotein

position:1231154:-1
position: 1231154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233980-1233994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1233239-1233299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231154-1232322:-1:exon

LOC116436949
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436949
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1235371..1236284)
location: region:1235371-1236284:-1
so has part: feature:1235371-1236284:-1:exon
subclass of: SO_0000011

116436949
type: Gene
SIO_000068: ncbigene

position:1235371:-1
position: 1235371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236284:-1
position: 1236284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235371-1236284:-1:exon

LOC116436949
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436949
product: uncharacterized LOC116436949
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XR_004237101.1
SIO_010081: LOC116436949
subclass of: SO_0000673
so part of: LOC116436949
location: complement(join(1235371..1235848,1236171..1236284))
location: region:1235371-1236284:-1
so has part: feature:1236171-1236284:-1:exon
so has part: feature:1235371-1235848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1236171-1236284:-1:exon

position:1236171:-1
position: 1236171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1235371-1235848:-1:exon

position:1235848:-1
position: 1235848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LSM2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LSM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1237999..1239481
location: region:1237999-1239481:1
so has part: feature:1237999-1239481:1:exon
subclass of: SO_0000010

116436942
type: Gene
SIO_000068: ncbigene

position:1237999:1
position: 1237999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239481:1
position: 1239481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237999-1239481:1:exon

LSM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LSM2
product: LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_032094399.1
SIO_010081: LSM2
subclass of: SO_0000673
so part of: LSM2
location: join(1237999..1238049,1238424..1238491,1238826..1238856,1238941..1239000,1239240..1239481)
location: region:1237999-1239481:1
so has part: feature:1237999-1238049:1:exon
so has part: feature:1238424-1238491:1:exon
so has part: feature:1238826-1238856:1:exon
so has part: feature:1238941-1239000:1:exon
so has part: feature:1239240-1239481:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1237999-1238049:1:exon

position:1238049:1
position: 1238049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1238424-1238491:1:exon

position:1238424:1
position: 1238424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238491:1
position: 1238491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1238826-1238856:1:exon

position:1238826:1
position: 1238826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238856:1
position: 1238856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1238941-1239000:1:exon

position:1238941:1
position: 1238941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239000:1
position: 1239000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1239240-1239481:1:exon

position:1239240:1
position: 1239240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LSM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm2
translation: MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
SIO_010081: LSM2
subclass of: SO_0000673
so part of: LSM2
location: join(1238047..1238049,1238424..1238491,1238826..1238856,1238941..1239000,1239240..1239365)
location: region:1238047-1239365:1
so has part: feature:1238047-1238049:1:exon
so has part: feature:1238424-1238491:1:exon
so has part: feature:1238826-1238856:1:exon
so has part: feature:1238941-1239000:1:exon
so has part: feature:1239240-1239365:1:exon

XP_031950290.1
type: Protein
SIO_000068: ncbiprotein

position:1238047:1
position: 1238047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239365:1
position: 1239365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238047-1238049:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1238424-1238491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1238826-1238856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238941-1239000:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1239240-1239365:1:exon

VARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: VARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1240351..1251863
location: region:1240351-1251863:1
so has part: feature:1240351-1251863:1:exon
subclass of: SO_0000010

116436878
type: Gene
SIO_000068: ncbigene

position:1240351:1
position: 1240351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251863:1
position: 1251863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240351-1251863:1:exon

VARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: VARS1
product: valyl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_032094298.1
SIO_010081: VARS1
subclass of: SO_0000673
so part of: VARS1
location: join(1240351..1240472,1240702..1240845,1241065..1241212,1241301..1241461,1241552..1241645,1241954..1242054,1242246..1242370,1242509..1242673,1243068..1243149,1243228..1243346,1243560..1243669,1243875..1243975,1244244..1244334,1244739..1244863,1245135..1245238,1245334..1245492,1245587..1245677,1245919..1246024,1246547..1246617,1246696..1246821,1247091..1247195,1247290..1247358,1247650..1247728,1247853..1247980,1249172..1249336,1249926..1250043,1250341..1250510,1250685..1250796,1251146..1251321,1251409..1251558,1251753..1251863)
location: region:1240351-1251863:1
so has part: feature:1240351-1240472:1:exon
so has part: feature:1240702-1240845:1:exon
so has part: feature:1241065-1241212:1:exon
so has part: feature:1241301-1241461:1:exon
so has part: feature:1241552-1241645:1:exon
so has part: feature:1241954-1242054:1:exon
so has part: feature:1242246-1242370:1:exon
so has part: feature:1242509-1242673:1:exon
so has part: feature:1243068-1243149:1:exon
so has part: feature:1243228-1243346:1:exon
so has part: feature:1243560-1243669:1:exon
so has part: feature:1243875-1243975:1:exon
so has part: feature:1244244-1244334:1:exon
so has part: feature:1244739-1244863:1:exon
so has part: feature:1245135-1245238:1:exon
so has part: feature:1245334-1245492:1:exon
so has part: feature:1245587-1245677:1:exon
so has part: feature:1245919-1246024:1:exon
so has part: feature:1246547-1246617:1:exon
so has part: feature:1246696-1246821:1:exon
so has part: feature:1247091-1247195:1:exon
so has part: feature:1247290-1247358:1:exon
so has part: feature:1247650-1247728:1:exon
so has part: feature:1247853-1247980:1:exon
so has part: feature:1249172-1249336:1:exon
so has part: feature:1249926-1250043:1:exon
so has part: feature:1250341-1250510:1:exon
so has part: feature:1250685-1250796:1:exon
so has part: feature:1251146-1251321:1:exon
so has part: feature:1251409-1251558:1:exon
so has part: feature:1251753-1251863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1240351-1240472:1:exon

position:1240472:1
position: 1240472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1240702-1240845:1:exon

position:1240702:1
position: 1240702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240845:1
position: 1240845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1241065-1241212:1:exon

position:1241065:1
position: 1241065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241212:1
position: 1241212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1241301-1241461:1:exon

position:1241301:1
position: 1241301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241461:1
position: 1241461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1241552-1241645:1:exon

position:1241552:1
position: 1241552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241645:1
position: 1241645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1241954-1242054:1:exon

position:1241954:1
position: 1241954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242054:1
position: 1242054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1242246-1242370:1:exon

position:1242246:1
position: 1242246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242370:1
position: 1242370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1242509-1242673:1:exon

position:1242509:1
position: 1242509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242673:1
position: 1242673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1243068-1243149:1:exon

position:1243068:1
position: 1243068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243149:1
position: 1243149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1243228-1243346:1:exon

position:1243228:1
position: 1243228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243346:1
position: 1243346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1243560-1243669:1:exon

position:1243560:1
position: 1243560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243669:1
position: 1243669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1243875-1243975:1:exon

position:1243875:1
position: 1243875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243975:1
position: 1243975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1244244-1244334:1:exon

position:1244244:1
position: 1244244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244334:1
position: 1244334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1244739-1244863:1:exon

position:1244739:1
position: 1244739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244863:1
position: 1244863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1245135-1245238:1:exon

position:1245135:1
position: 1245135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245238:1
position: 1245238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1245334-1245492:1:exon

position:1245334:1
position: 1245334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245492:1
position: 1245492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1245587-1245677:1:exon

position:1245587:1
position: 1245587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245677:1
position: 1245677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1245919-1246024:1:exon

position:1245919:1
position: 1245919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246024:1
position: 1246024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1246547-1246617:1:exon

position:1246547:1
position: 1246547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246617:1
position: 1246617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1246696-1246821:1:exon

position:1246696:1
position: 1246696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246821:1
position: 1246821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1247091-1247195:1:exon

position:1247091:1
position: 1247091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247195:1
position: 1247195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1247290-1247358:1:exon

position:1247290:1
position: 1247290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247358:1
position: 1247358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1247650-1247728:1:exon

position:1247650:1
position: 1247650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247728:1
position: 1247728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1247853-1247980:1:exon

position:1247853:1
position: 1247853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247980:1
position: 1247980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1249172-1249336:1:exon

position:1249172:1
position: 1249172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249336:1
position: 1249336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1249926-1250043:1:exon

position:1249926:1
position: 1249926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250043:1
position: 1250043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1250341-1250510:1:exon

position:1250341:1
position: 1250341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250510:1
position: 1250510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1250685-1250796:1:exon

position:1250685:1
position: 1250685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250796:1
position: 1250796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1251146-1251321:1:exon

position:1251146:1
position: 1251146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251321:1
position: 1251321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1251409-1251558:1:exon

position:1251409:1
position: 1251409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251558:1
position: 1251558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1251753-1251863:1:exon

position:1251753:1
position: 1251753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: VARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: valine--tRNA ligase
translation: MCLPPPNVTGTLHLGHALTVAIQDTLTRWHRMRGLTTLWAPGCDHAGIATQVVVERRLLRSRGVTRHQLGRDAFLGEVWRWKEEKGDRIYQQLRRLGASMDWERACFTMDPKMSRAVTEAFVRLHEQGLIYRSRRIVHWSCTLRSAISDIEVEKRELGGRTLLRVPGYEEPVEFGVLVAFAYPLEGAGEGEDAEVVVATTRLETMLGDEAVAVHPEDPRYQHLRGRHVLHPFTGRRLPVLHDPFVDPQFGTGAVKITPAHDATDFEVGQRHGLGGATVIGEDGTMVNVPAPFQGMPRFKARSALLETLKERGLFRGVSENPMVVPICSRSKDVLEPRAVPQWFVRCQGLAGAAAAAVRRGDLRLHPASHARTWFSWMDNIRDWCISRQLWWGHRIPAYFVTINDPRVPPGQDEDDRFWVSGRSEDEARAKAAAAFGVPPELVSLRQDEDVLDTWFSSGLFPFSIFGWPDPTPDLERFYPGSLLETGHDILFFWVARMVMLGLALTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIAGVSLQELHQQLESSNLDPAELERAREGQKRDFPEGIPECGTDALRFALCAYTAQGRDINLDVGRVLGYRHFCNKVWNGARFVLRALGEGYRPPPAPQEGSGGPRGALAERWVRSRLSRAVQGCGAALGGFDFPGATTAVHGFWVYELCDVYLECVKPVLARAAPAQPGGVPGGPEGEGEGHGGDGDEDEERGDVEAVRDTLLTCLDAGLRLLAPFMPFLAEELWQRLPPRAPPAPPSICLAPFPEPEQFCWQDEEAEATMEFVLGIVRALRSLRAAHGLTRQRPPCFLQCPDPAWGSRARRYRGLLRALGGVGAVRLLGGGEGPPQGCAVAVASDRCTVHLLLKGVVDPPKELSRLGGRREELEKALERLRERRGGPGYAQKVPPHVQEADAAKLTQLESELRNVLEAEELMRKML
SIO_010081: VARS1
subclass of: SO_0000673
so part of: VARS1
location: join(1242285..1242370,1242509..1242673,1243068..1243149,1243228..1243346,1243560..1243669,1243875..1243975,1244244..1244334,1244739..1244863,1245135..1245238,1245334..1245492,1245587..1245677,1245919..1246024,1246547..1246617,1246696..1246821,1247091..1247195,1247290..1247358,1247650..1247728,1247853..1247980,1249172..1249336,1249926..1250043,1250341..1250510,1250685..1250796,1251146..1251321,1251409..1251558,1251753..1251821)
location: region:1242285-1251821:1
so has part: feature:1242285-1242370:1:exon
so has part: feature:1242509-1242673:1:exon
so has part: feature:1243068-1243149:1:exon
so has part: feature:1243228-1243346:1:exon
so has part: feature:1243560-1243669:1:exon
so has part: feature:1243875-1243975:1:exon
so has part: feature:1244244-1244334:1:exon
so has part: feature:1244739-1244863:1:exon
so has part: feature:1245135-1245238:1:exon
so has part: feature:1245334-1245492:1:exon
so has part: feature:1245587-1245677:1:exon
so has part: feature:1245919-1246024:1:exon
so has part: feature:1246547-1246617:1:exon
so has part: feature:1246696-1246821:1:exon
so has part: feature:1247091-1247195:1:exon
so has part: feature:1247290-1247358:1:exon
so has part: feature:1247650-1247728:1:exon
so has part: feature:1247853-1247980:1:exon
so has part: feature:1249172-1249336:1:exon
so has part: feature:1249926-1250043:1:exon
so has part: feature:1250341-1250510:1:exon
so has part: feature:1250685-1250796:1:exon
so has part: feature:1251146-1251321:1:exon
so has part: feature:1251409-1251558:1:exon
so has part: feature:1251753-1251821:1:exon

XP_031950189.1
type: Protein
SIO_000068: ncbiprotein

position:1242285:1
position: 1242285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251821:1
position: 1251821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242285-1242370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1242509-1242673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243068-1243149:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1243228-1243346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243560-1243669:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243875-1243975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1244244-1244334:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1244739-1244863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1245135-1245238:1:exon