Corvus moneduloides isolate bCorMon1 chromosome 30, bCorMon1.pri, whole genome shotgun sequence.
type: Entry
definition: Corvus moneduloides isolate bCorMon1 chromosome 30, bCorMon1.pri, whole genome shotgun sequence.
sequence version: NC_045505.1
sequence date: 2020-01-23
sequence: sequence
division: CON
label: NC_045505.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA599199
dblink: SAMN12368441
keyword: WGS
keyword: RefSeq
source: Corvus moneduloides (New Caledonian crow)
organism: Corvus moneduloides
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM018836.1.\nAssembly name: bCorMon1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/11/14. The original whole-genome shotgun project has the\naccession WHPO00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n + Arrow v. 6.0.0.47841; purge_dups v.\n github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Bionano solve v. 3.2.1_04122018; Salsa\n HiC v. 2.2; Arrow polishing + gap filling\n v. SMRTlink_6.0.0.47841; longranger\n alignment v. 2.2.2; freebayes polishing\n v. 1.3.1; gEVAL manual curation v. 26 SEP\n 2019; VGP assembly pipeline v. 1.6\nAssembly Name :: bCorMon1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.08x\nSequencing Technology :: PacBio Sequel I; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus moneduloides Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2735592
topology: linear
so has quality: SO_0000987
location: 1..2735592
location: region:1-2735592:1
RO_0002162: 1196302

NC_045505
type: RefSeq
SIO_000068: refseq

PRJNA599199
type: BioProject
SIO_000068: bioproject

SAMN12368441
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2735592:1
position: 2735592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2735592:1:source
so part of: sequence
organism: Corvus moneduloides
mol type: genomic DNA
isolate: bCorMon1
chromosome: 30
sex: female
tissue type: blood
country: New Caledonia: near Bourail
lat lon: 21.599296 S 165.398128 E
collection date: 17-Oct-2018
collected by: Matthew Steele

1196302
type: Taxonomy
SIO_000068: taxonomy

RAB5B
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: RAB5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <4044..12184
location: region:4044-12184:1
so has part: feature:4044-12184:1:exon
subclass of: SO_0000010

116436594
type: Gene
SIO_000068: ncbigene

position:4044:1
position: 4044
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:12184:1
position: 12184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4044-12184:1:exon

RAB5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RAB5B
product: RAB5B, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 42 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
transcript id: XM_032093819.1
SIO_010081: RAB5B
subclass of: SO_0000673
so part of: RAB5B
location: join(<4044..4220,9021..9143,10181..10274,12048..12184)
location: region:4044-12184:1
so has part: feature:4044-4220:1:exon
so has part: feature:9021-9143:1:exon
so has part: feature:10181-10274:1:exon
so has part: feature:12048-12184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4044-4220:1:exon

position:4220:1
position: 4220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9021-9143:1:exon

position:9021:1
position: 9021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9143:1
position: 9143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10181-10274:1:exon

position:10181:1
position: 10181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10274:1
position: 10274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12048-12184:1:exon

position:12048:1
position: 12048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RAB5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-5B
translation: RAPRARPPAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARARSWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKNEPQSTSGAGGRGRGVDLHEQSPQGRGQCCSN
SIO_010081: RAB5B
subclass of: SO_0000673
so part of: RAB5B
location: join(<4044..4220,9021..9143,10181..10274,12048..12163)
location: region:4044-12163:1
so has part: feature:4044-4220:1:exon
so has part: feature:9021-9143:1:exon
so has part: feature:10181-10274:1:exon
so has part: feature:12048-12163:1:exon

XP_031949710.1
type: Protein
SIO_000068: ncbiprotein

position:12163:1
position: 12163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4044-4220:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9021-9143:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10181-10274:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12048-12163:1:exon

LOC116436622
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12988..14269
location: region:12988-14269:1
so has part: feature:12988-14269:1:exon
subclass of: SO_0000010

116436622
type: Gene
SIO_000068: ncbigene

position:12988:1
position: 12988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14269:1
position: 14269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12988-14269:1:exon

LOC116436622
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436622
product: vegetative cell wall protein gp1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032093852.1
SIO_010081: LOC116436622
subclass of: SO_0000673
so part of: LOC116436622
location: join(12988..14161,14202..14269)
location: region:12988-14269:1
so has part: feature:12988-14161:1:exon
so has part: feature:14202-14269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12988-14161:1:exon

position:14161:1
position: 14161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14202-14269:1:exon

position:14202:1
position: 14202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436622
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vegetative cell wall protein gp1-like
translation: MDPPDPIQLNQIPPGSSRSLLAPPDLTRVLQVPPGSTRSLLDPPDPTWLHQIPSKSTRSHPSPLDPSWLHQIPPGSTRSYLAPPDPSWILQIPLGSTRLHLDPPDPIQLHQIPPGSTRSFLAPPDPIQLHQIPPGSTRPQSCSRSRGRSAGTGFPRIPGLSVRPHRIPGPEDAGIPPLGTPRDPGSPECPLLGGRWHPETPGMDFPRGRHRFRWDFDDSRPVPGAAASPRPSPQDPKCLGTSGDTEGTLSAGGGPVANGPVVVVTPQRCPGGHLGCGHLTAMSPGHPGHGHPTAMPPWASGPWSPHSDVPSVTPAVITPQRCPPGHPTAMSPWSPQPWPPHSDVPVVIWAMATPQQCPCGQPSPGHPTMMSPWSSGPWSLHNDVPMAVVTPQRCPLLSWLWL
SIO_010081: LOC116436622
subclass of: SO_0000673
so part of: LOC116436622
location: join(13009..14161,14202..14257)
location: region:13009-14257:1
so has part: feature:13009-14161:1:exon
so has part: feature:14202-14257:1:exon

XP_031949743.1
type: Protein
SIO_000068: ncbiprotein

position:13009:1
position: 13009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14257:1
position: 14257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13009-14161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14202-14257:1:exon

LOC116436620
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14103..16317
location: region:14103-16317:1
so has part: feature:14103-16317:1:exon
subclass of: SO_0000010

116436620
type: Gene
SIO_000068: ncbigene

position:14103:1
position: 14103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16317:1
position: 16317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14103-16317:1:exon

LOC116436620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436620
product: collagen alpha-5(IV) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093847.1
SIO_010081: LOC116436620
subclass of: SO_0000673
so part of: LOC116436620
location: join(14103..14177,14218..14725,14840..14878,14993..15145,15257..16317)
location: region:14103-16317:1
so has part: feature:14103-14177:1:exon
so has part: feature:14218-14725:1:exon
so has part: feature:14840-14878:1:exon
so has part: feature:14993-15145:1:exon
so has part: feature:15257-16317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14103-14177:1:exon

position:14177:1
position: 14177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14218-14725:1:exon

position:14218:1
position: 14218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14725:1
position: 14725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14840-14878:1:exon

position:14840:1
position: 14840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14878:1
position: 14878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14993-15145:1:exon

position:14993:1
position: 14993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15145:1
position: 15145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15257-16317:1:exon

position:15257:1
position: 15257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-5(IV) chain-like
translation: MILALVAPWGHPPPPPSGPGHGGPQVTSPAGPSGGPQVTSPGDPIHGGPQVTSTGDPGPGGPQVTSPGDPIHGGPQVTSPGDPGHGGPQVTSPGDPIHGGPQVTSPGDPGHGGPQVTSPAGPSGGPQVTSPDDPGPGGPQVTSPGDPIHGGPQVTSPGDPGHGGPQVTSPGDPGPGGPQVTSPGDPIHGGPQVTSPGDPIHGGPQVTSPAGPSGGPQVTSPGDPGPGGPQVTSPAGPSGGPQVTSPDDPGPGGPQVTSPGDPGHGGPQVTSPAGPSGGPQVTSPGDPIHGGPQVTSPGDPIHGGPQVTSPAGPSGGPQVTSPGDPIHGGPQVTSPGDPGHGGPQVTSPGDLGPGGPQVTSPAGPSGGPQVTSPGDPGHGGPQVTSPGDPIHGGPQVTSPGDPGHGGPQVTSPGDPIHGGPQVTSPGDPIHGGPQVTSPAGPSGGPQVTSPAGPSGGHVVPPCRSQPWPPPRCHPPLCPCPHPGAIPVCTLWSDVPSGHPWVLSPCPQGGGSEGATRGQRLPPPPCPWSWSLLELEGPSVSPTLSQGCCQAREGHPEIWDTSR
SIO_010081: LOC116436620
subclass of: SO_0000673
so part of: LOC116436620
location: join(14267..14725,14840..14878,14993..15145,15257..16294)
location: region:14267-16294:1
so has part: feature:14267-14725:1:exon
so has part: feature:14840-14878:1:exon
so has part: feature:14993-15145:1:exon
so has part: feature:15257-16294:1:exon

XP_031949738.1
type: Protein
SIO_000068: ncbiprotein

position:14267:1
position: 14267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16294:1
position: 16294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14267-14725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14840-14878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14993-15145:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15257-16294:1:exon

SUOX
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SUOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 18502..28323
location: region:18502-28323:1
so has part: feature:18502-28323:1:exon
subclass of: SO_0000010

116436621
type: Gene
SIO_000068: ncbigene

position:18502:1
position: 18502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28323:1
position: 28323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18502-28323:1:exon

SUOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SUOX
product: sulfite oxidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032093850.1
SIO_010081: SUOX
subclass of: SO_0000673
so part of: SUOX
location: join(18502..18778,19515..19651,19730..19877,21446..22624,28030..28323)
location: region:18502-28323:1
so has part: feature:18502-18778:1:exon
so has part: feature:19515-19651:1:exon
so has part: feature:19730-19877:1:exon
so has part: feature:21446-22624:1:exon
so has part: feature:28030-28323:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18502-18778:1:exon

position:18778:1
position: 18778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19515-19651:1:exon

position:19515:1
position: 19515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19651:1
position: 19651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19730-19877:1:exon

position:19730:1
position: 19730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19877:1
position: 19877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21446-22624:1:exon

position:21446:1
position: 21446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22624:1
position: 22624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:28030-28323:1:exon

position:28030:1
position: 28030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SUOX
product: sulfite oxidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_032093849.1
SIO_010081: SUOX
subclass of: SO_0000673
so part of: SUOX
location: join(18502..18778,19544..19651,19730..19877,21446..22624,28030..28323)
location: region:18502-28323:1
so has part: feature:18502-18778:1:exon
so has part: feature:19544-19651:1:exon
so has part: feature:19730-19877:1:exon
so has part: feature:21446-22624:1:exon
so has part: feature:28030-28323:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18502-18778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19544-19651:1:exon

position:19544:1
position: 19544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19730-19877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21446-22624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28030-28323:1:exon

SUOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SUOX
product: sulfite oxidase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_032093851.1
SIO_010081: SUOX
subclass of: SO_0000673
so part of: SUOX
location: join(18793..18870,19544..19651,19730..19877,21446..22624,28030..28323)
location: region:18793-28323:1
so has part: feature:18793-18870:1:exon
so has part: feature:19544-19651:1:exon
so has part: feature:19730-19877:1:exon
so has part: feature:21446-22624:1:exon
so has part: feature:28030-28323:1:exon

position:18793:1
position: 18793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18793-18870:1:exon

position:18870:1
position: 18870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19544-19651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19730-19877:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21446-22624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28030-28323:1:exon

SUOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SUOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfite oxidase, mitochondrial
translation: MLLLRAMAGRRLPPLTQLHRGCSRLAAGSAAPGGHRGAAPVLAALLGLGAVLAYGERRRRSAQAAQATPAPQYPRYTRAEVARHRTPADRVWVTHGTEVFDVTDFVELHPGGPDKLLLAAGGPLEPFWALYAVHSQPHVLELLRDYKVGELSPEEAAPPPGDTQDPFAGDPPRHPALRVNSLKPFNAEPPPELLTQSFLTPNELFFTRNHLPVPAVEPGSYRLRVEGPGGRSLSLSLEELRGRFPKHEVTATLQCAGNRRSEMSRVRPVKGLAWDIGAISTARWGGARLRDVLLHAGFGDHPPAEGEWHVCFEGLDVDASGTPYGASIPFHRAISAEAEVLLAYEMNGQELPRDHGFPVRVVVPGVVGARSVKWLRSVAVSPAESPSHWQQNDYKGFCPSVDWDTVDFRAAPAIQELPVQSAITEPRPGAAVPEGELTVKGYAWSGGGREVVRVDVSLDGGRTWRAAELPGQRGRGWAWALWELRAPVAAGSRLDIVCKAVDRSYNVQPDTVAPIWNLRGVLSNAWHRVPVTVTR
SIO_010081: SUOX
subclass of: SO_0000673
so part of: SUOX
location: join(19620..19651,19730..19877,21446..22624,28030..28278)
location: region:19620-28278:1
so has part: feature:19620-19651:1:exon
so has part: feature:19730-19877:1:exon
so has part: feature:21446-22624:1:exon
so has part: feature:28030-28278:1:exon

XP_031949740.1
type: Protein
SIO_000068: ncbiprotein

position:19620:1
position: 19620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28278:1
position: 28278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19620-19651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19730-19877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21446-22624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28030-28278:1:exon

SUOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SUOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfite oxidase, mitochondrial
translation: MLLLRAMAGRRLPPLTQLHRGCSRLAAGSAAPGGHRGAAPVLAALLGLGAVLAYGERRRRSAQAAQATPAPQYPRYTRAEVARHRTPADRVWVTHGTEVFDVTDFVELHPGGPDKLLLAAGGPLEPFWALYAVHSQPHVLELLRDYKVGELSPEEAAPPPGDTQDPFAGDPPRHPALRVNSLKPFNAEPPPELLTQSFLTPNELFFTRNHLPVPAVEPGSYRLRVEGPGGRSLSLSLEELRGRFPKHEVTATLQCAGNRRSEMSRVRPVKGLAWDIGAISTARWGGARLRDVLLHAGFGDHPPAEGEWHVCFEGLDVDASGTPYGASIPFHRAISAEAEVLLAYEMNGQELPRDHGFPVRVVVPGVVGARSVKWLRSVAVSPAESPSHWQQNDYKGFCPSVDWDTVDFRAAPAIQELPVQSAITEPRPGAAVPEGELTVKGYAWSGGGREVVRVDVSLDGGRTWRAAELPGQRGRGWAWALWELRAPVAAGSRLDIVCKAVDRSYNVQPDTVAPIWNLRGVLSNAWHRVPVTVTR
SIO_010081: SUOX
subclass of: SO_0000673
so part of: SUOX
location: join(19620..19651,19730..19877,21446..22624,28030..28278)
location: region:19620-28278:1
so has part: feature:19620-19651:1:exon
so has part: feature:19730-19877:1:exon
so has part: feature:21446-22624:1:exon
so has part: feature:28030-28278:1:exon

XP_031949741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19620-19651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19730-19877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21446-22624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28030-28278:1:exon

SUOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SUOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfite oxidase, mitochondrial
translation: MLLLRAMAGRRLPPLTQLHRGCSRLAAGSAAPGGHRGAAPVLAALLGLGAVLAYGERRRRSAQAAQATPAPQYPRYTRAEVARHRTPADRVWVTHGTEVFDVTDFVELHPGGPDKLLLAAGGPLEPFWALYAVHSQPHVLELLRDYKVGELSPEEAAPPPGDTQDPFAGDPPRHPALRVNSLKPFNAEPPPELLTQSFLTPNELFFTRNHLPVPAVEPGSYRLRVEGPGGRSLSLSLEELRGRFPKHEVTATLQCAGNRRSEMSRVRPVKGLAWDIGAISTARWGGARLRDVLLHAGFGDHPPAEGEWHVCFEGLDVDASGTPYGASIPFHRAISAEAEVLLAYEMNGQELPRDHGFPVRVVVPGVVGARSVKWLRSVAVSPAESPSHWQQNDYKGFCPSVDWDTVDFRAAPAIQELPVQSAITEPRPGAAVPEGELTVKGYAWSGGGREVVRVDVSLDGGRTWRAAELPGQRGRGWAWALWELRAPVAAGSRLDIVCKAVDRSYNVQPDTVAPIWNLRGVLSNAWHRVPVTVTR
SIO_010081: SUOX
subclass of: SO_0000673
so part of: SUOX
location: join(19620..19651,19730..19877,21446..22624,28030..28278)
location: region:19620-28278:1
so has part: feature:19620-19651:1:exon
so has part: feature:19730-19877:1:exon
so has part: feature:21446-22624:1:exon
so has part: feature:28030-28278:1:exon

XP_031949742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19620-19651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19730-19877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21446-22624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28030-28278:1:exon

LOC116436596
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 30537..34060
location: region:30537-34060:1
so has part: feature:30537-34060:1:exon
subclass of: SO_0000010

116436596
type: Gene
SIO_000068: ncbigene

position:30537:1
position: 30537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34060:1
position: 34060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30537-34060:1:exon

LOC116436596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436596
product: uncharacterized LOC116436596
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093820.1
SIO_010081: LOC116436596
subclass of: SO_0000673
so part of: LOC116436596
location: join(30537..30799,30949..31581,31919..31967,32049..32107,32149..32861,34051..34060)
location: region:30537-34060:1
so has part: feature:30537-30799:1:exon
so has part: feature:30949-31581:1:exon
so has part: feature:31919-31967:1:exon
so has part: feature:32049-32107:1:exon
so has part: feature:32149-32861:1:exon
so has part: feature:34051-34060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30537-30799:1:exon

position:30799:1
position: 30799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30949-31581:1:exon

position:30949:1
position: 30949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31581:1
position: 31581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:31919-31967:1:exon

position:31919:1
position: 31919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31967:1
position: 31967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:32049-32107:1:exon

position:32049:1
position: 32049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32107:1
position: 32107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:32149-32861:1:exon

position:32149:1
position: 32149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32861:1
position: 32861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:34051-34060:1:exon

position:34051:1
position: 34051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436596
translation: MDPKRILWIPQSVPETPKGFYGPQKDFMDPKVFQRPQKNFMDLKRILWIPQSVPETPKGFYGSPKRILWIPQSVPETPKGFYGPQSVPETPKEFYGPQKDFMDPPKCSRDPKRILWTPKCSRDPKRILWTPKGFYGSPKVFQRPQKDFMDPKRILWTPKCSRDPKRILWTPKGFYGSPKVFQRPQKDFMDPPKCSRDPKRILWTPKCSTDPKRILWIPQKDFMDPPKGFYGLQRILWTPKDFVDPKRILWTPKDFKDPKKDFKDPKKFSGPDGFYGPKGFDNPTARRSPGFYGPGVLWPRGFMAPGVLWPPRFYGPGIYTPMRESASIKIWELLWPRSQ
SIO_010081: LOC116436596
subclass of: SO_0000673
so part of: LOC116436596
location: join(31393..31581,31919..31967,32049..32107,32149..32861,34051..34060)
location: region:31393-34060:1
so has part: feature:31393-31581:1:exon
so has part: feature:31919-31967:1:exon
so has part: feature:32049-32107:1:exon
so has part: feature:32149-32861:1:exon
so has part: feature:34051-34060:1:exon

XP_031949711.1
type: Protein
SIO_000068: ncbiprotein

position:31393:1
position: 31393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31393-31581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31919-31967:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32049-32107:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32149-32861:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34051-34060:1:exon

IKZF4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: IKZF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 38842..90427
location: region:38842-90427:1
so has part: feature:38842-90427:1:exon
subclass of: SO_0000010

116436798
type: Gene
SIO_000068: ncbigene

position:38842:1
position: 38842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90427:1
position: 90427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38842-90427:1:exon

IKZF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IKZF4
product: IKAROS family zinc finger 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032094190.1
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(38842..38864,52679..52732,57870..57995,63277..63375,72025..72261,74767..74934,78353..78493,83640..83765,88598..89557)
location: region:38842-89557:1
so has part: feature:38842-38864:1:exon
so has part: feature:52679-52732:1:exon
so has part: feature:57870-57995:1:exon
so has part: feature:63277-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89557:1:exon

position:89557:1
position: 89557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38842-38864:1:exon

position:38864:1
position: 38864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52679-52732:1:exon

position:52679:1
position: 52679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52732:1
position: 52732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57870-57995:1:exon

position:57870:1
position: 57870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57995:1
position: 57995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:63277-63375:1:exon

position:63277:1
position: 63277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63375:1
position: 63375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:72025-72261:1:exon

position:72025:1
position: 72025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72261:1
position: 72261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:74767-74934:1:exon

position:74767:1
position: 74767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74934:1
position: 74934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:78353-78493:1:exon

position:78353:1
position: 78353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78493:1
position: 78493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:83640-83765:1:exon

position:83640:1
position: 83640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83765:1
position: 83765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:88598-89557:1:exon

position:88598:1
position: 88598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436597
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43925..46152
location: region:43925-46152:1
so has part: feature:43925-46152:1:exon
subclass of: SO_0000010

116436597
type: Gene
SIO_000068: ncbigene

position:43925:1
position: 43925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46152:1
position: 46152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43925-46152:1:exon

LOC116436597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436597
product: uncharacterized LOC116436597
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093821.1
SIO_010081: LOC116436597
subclass of: SO_0000673
so part of: LOC116436597
location: join(43925..44705,44778..45456,46070..46152)
location: region:43925-46152:1
so has part: feature:43925-44705:1:exon
so has part: feature:44778-45456:1:exon
so has part: feature:46070-46152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43925-44705:1:exon

position:44705:1
position: 44705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44778-45456:1:exon

position:44778:1
position: 44778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45456:1
position: 45456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46070-46152:1:exon

position:46070:1
position: 46070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436597
translation: MGIYPGFIWDSIPCFPSYAESGNWGFSGIPFPVFPVVPRAGMGIYPGFIWDSIPCFPSCSKAGNGDFSGIPFAVFPVMQRVGIGVYLGFHSLFFPVVPRAGMGIYPGFIRDLSRIYLGFHSLFSQLCQGWELGFFWDSIPCFPSCSKGRNGDLSRIYPGFIWDSIPCFPSCSKAGNWDLSQIPSPAFPAVPSAGNEDSSSISPGFLQDSIPCFFPTLQRVGIAAAWAQFLEKRPGNVGEKSGRRSQPVSRDGNGGVPRGGWTWIGRASRSFPTERIPGFQMGPPRGLLGLGWGGSEFPAGILFPGISAAGEDGALGGGKSGICLPGAGIRRISRWVFGGGGGGG
SIO_010081: LOC116436597
subclass of: SO_0000673
so part of: LOC116436597
location: join(44433..44705,44778..45456,46070..46152)
location: region:44433-46152:1
so has part: feature:44433-44705:1:exon
so has part: feature:44778-45456:1:exon
so has part: feature:46070-46152:1:exon

XP_031949712.1
type: Protein
SIO_000068: ncbiprotein

position:44433:1
position: 44433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44433-44705:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44778-45456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46070-46152:1:exon

IKZF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IKZF4
product: IKAROS family zinc finger 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032094191.1
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(45632..46118,52679..52732,57870..57995,63277..63375,72025..72261,74767..74934,78353..78493,83640..83765,88598..89557)
location: region:45632-89557:1
so has part: feature:45632-46118:1:exon
so has part: feature:52679-52732:1:exon
so has part: feature:57870-57995:1:exon
so has part: feature:63277-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89557:1:exon

position:45632:1
position: 45632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45632-46118:1:exon

position:46118:1
position: 46118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52679-52732:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57870-57995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63277-63375:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:88598-89557:1:exon

LOC116436802
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436802
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51884..52581)
location: region:51884-52581:-1
so has part: feature:51884-52581:-1:exon
subclass of: SO_0000011

116436802
type: Gene
SIO_000068: ncbigene

position:51884:-1
position: 51884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52581:-1
position: 52581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51884-52581:-1:exon

LOC116436802
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436802
product: uncharacterized LOC116436802
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004237077.1
SIO_010081: LOC116436802
subclass of: SO_0000673
so part of: LOC116436802
location: complement(join(51884..51922,52119..52230,52336..52415,52528..52581))
location: region:51884-52581:-1
so has part: feature:52528-52581:-1:exon
so has part: feature:52336-52415:-1:exon
so has part: feature:52119-52230:-1:exon
so has part: feature:51884-51922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52528-52581:-1:exon

position:52528:-1
position: 52528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52336-52415:-1:exon

position:52336:-1
position: 52336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52415:-1
position: 52415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:52119-52230:-1:exon

position:52119:-1
position: 52119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52230:-1
position: 52230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51884-51922:-1:exon

position:51922:-1
position: 51922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IKZF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IKZF4
product: IKAROS family zinc finger 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032094194.1
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(52667..52732,55455..57743)
location: region:52667-57743:1
so has part: feature:52667-52732:1:exon
so has part: feature:55455-57743:1:exon

position:52667:1
position: 52667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57743:1
position: 57743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52667-52732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55455-57743:1:exon

position:55455:1
position: 55455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IKZF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IKZF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Eos isoform X2
translation: MDIEDCNARSYITGICSSWKVSGCVRPASTALRPPGIPRCFPGIGIQGAPGYLQQGRGDSPLEPEFRSAVVGAAARSPPSPRSSPRSPANSIKVEMSSDEESSGRLLAQEDKEGLGEDSLPEPFPEPFPEPHSPGGIRLPNGKLKCDVCGMVCIGPNVLMVHKRSHTGERPFQCQQCGASFTQKGNLLRHIKLHSGEKPFKCPFCSYACRRRDALSGHLRTHSVSSPTVGKPYKCSSCGRSYKQQSSLEEHRERCHSFLRSLPPENPAQPGEEIRELDMVPEALLHPERPTFIERLAGSFTKRKRSTPQKFVGEKQMRFALSELPFDVSPGFEKDVDVVPARGHPLDPPYAGPLSLLGAGDPLRPLRLATNCITEVTPVISSVYTQIQALPARLELPRGREASEDGPEGIPVIFRSRDPGGSPSNGCQDSTDTESIQEERPGGSSRHSPAFAKEEPKEGPEGAARCFPKDSLRVLNEDGEQLRAFCCEHCRVLFLDHVMFTIHMGCHGFRDPFECNICGYRSQDRYEFSSHIVRGEHKI
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(52693..52732,57870..57995,63277..63375,72025..72261,74767..74934,78353..78493,83640..83765,88598..89280)
location: region:52693-89280:1
so has part: feature:52693-52732:1:exon
so has part: feature:57870-57995:1:exon
so has part: feature:63277-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89280:1:exon

XP_031950081.1
type: Protein
SIO_000068: ncbiprotein

position:52693:1
position: 52693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89280:1
position: 89280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52693-52732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57870-57995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63277-63375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:88598-89280:1:exon

IKZF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IKZF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Eos isoform X2
translation: MDIEDCNARSYITGICSSWKVSGCVRPASTALRPPGIPRCFPGIGIQGAPGYLQQGRGDSPLEPEFRSAVVGAAARSPPSPRSSPRSPANSIKVEMSSDEESSGRLLAQEDKEGLGEDSLPEPFPEPFPEPHSPGGIRLPNGKLKCDVCGMVCIGPNVLMVHKRSHTGERPFQCQQCGASFTQKGNLLRHIKLHSGEKPFKCPFCSYACRRRDALSGHLRTHSVSSPTVGKPYKCSSCGRSYKQQSSLEEHRERCHSFLRSLPPENPAQPGEEIRELDMVPEALLHPERPTFIERLAGSFTKRKRSTPQKFVGEKQMRFALSELPFDVSPGFEKDVDVVPARGHPLDPPYAGPLSLLGAGDPLRPLRLATNCITEVTPVISSVYTQIQALPARLELPRGREASEDGPEGIPVIFRSRDPGGSPSNGCQDSTDTESIQEERPGGSSRHSPAFAKEEPKEGPEGAARCFPKDSLRVLNEDGEQLRAFCCEHCRVLFLDHVMFTIHMGCHGFRDPFECNICGYRSQDRYEFSSHIVRGEHKI
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(52693..52732,57870..57995,63277..63375,72025..72261,74767..74934,78353..78493,83640..83765,88598..89280)
location: region:52693-89280:1
so has part: feature:52693-52732:1:exon
so has part: feature:57870-57995:1:exon
so has part: feature:63277-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89280:1:exon

XP_031950082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52693-52732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57870-57995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63277-63375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:88598-89280:1:exon

IKZF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IKZF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Eos isoform X4
translation: MVPIPAWQRPGNELQENSRREKLFQGAWNVPRKAEQVRSCSGGAGIAPQGSGRGRGGGEGELGREFSGFGILPWMLIPKKKKKKRVWIHAAGVAAGKASLGIQPGSIPDPSRIHPGAIPSLGIQPGSIPDPSWSHPEPRDPSQIHPGSILSLGIHPGAIPEPSRIHPEPRDPSRIHPGSIPSLGIHPGSILEPSQIHPGSILDPSRASGSIPEPSRIHPEPLEPSRIHPKSIPDPSRASGSIPDPSQIHPRSIPGPSRASGAILDPSQIHPGSIPDPSRASGSIPDPSQIHPGSIPDPSRIHPGSLPSLWIHPRSILSLWSHPGSIPAPSRIPPGSLPDPSRLPPGSLLSHPIPWQLPAPSLGSLPPPVPIPAAIPDFRECSIPQPHPAKIWDPTKFWDPSLPPSSFPTFPFPPLSRLIPAAIPGAIPSSCLCSAPSR
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: 56081..57397
location: region:56081-57397:1
so has part: feature:56081-57397:1:exon

XP_031950085.1
type: Protein
SIO_000068: ncbiprotein

position:56081:1
position: 56081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57397:1
position: 57397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56081-57397:1:exon

IKZF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IKZF4
product: IKAROS family zinc finger 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_032094192.1
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(58111..58294,63277..63375,72025..72261,74767..74934,78353..78493,83640..83765,88598..89557)
location: region:58111-89557:1
so has part: feature:58111-58294:1:exon
so has part: feature:63277-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89557:1:exon

position:58111:1
position: 58111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58111-58294:1:exon

position:58294:1
position: 58294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63277-63375:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88598-89557:1:exon

IKZF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IKZF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Eos isoform X3
translation: MKLRDIPEGRGDSPLEPEFRSAVVGAAARSPPSPRSSPRSPANSIKVEMSSDEESSGRLLAQEDKEGLGEDSLPEPFPEPFPEPHSPGGIRLPNGKLKCDVCGMVCIGPNVLMVHKRSHTGERPFQCQQCGASFTQKGNLLRHIKLHSGEKPFKCPFCSYACRRRDALSGHLRTHSVSSPTVGKPYKCSSCGRSYKQQSSLEEHRERCHSFLRSLPPENPAQPGEEIRELDMVPEALLHPERPTFIERLAGSFTKRKRSTPQKFVGEKQMRFALSELPFDVSPGFEKDVDVVPARGHPLDPPYAGPLSLLGAGDPLRPLRLATNCITEVTPVISSVYTQIQALPARLELPRGREASEDGPEGIPVIFRSRDPGGSPSNGCQDSTDTESIQEERPGGSSRHSPAFAKEEPKEGPEGAARCFPKDSLRVLNEDGEQLRAFCCEHCRVLFLDHVMFTIHMGCHGFRDPFECNICGYRSQDRYEFSSHIVRGEHKI
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(58270..58294,63277..63375,72025..72261,74767..74934,78353..78493,83640..83765,88598..89280)
location: region:58270-89280:1
so has part: feature:58270-58294:1:exon
so has part: feature:63277-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89280:1:exon

XP_031950083.1
type: Protein
SIO_000068: ncbiprotein

position:58270:1
position: 58270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58270-58294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63277-63375:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88598-89280:1:exon

IKZF4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: IKZF4
product: IKAROS family zinc finger 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XR_004237071.1
SIO_010081: IKZF4
so part of: IKZF4
location: join(62869..63375,72025..72261,74767..74934,78353..78493,83470..83542,83640..83765,88598..89552,89868..90427)
location: region:62869-90427:1
so has part: feature:62869-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83470-83542:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89552:1:exon
so has part: feature:89868-90427:1:exon

position:62869:1
position: 62869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62869-63375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83470-83542:1:exon

position:83470:1
position: 83470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83542:1
position: 83542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88598-89552:1:exon

position:89552:1
position: 89552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89868-90427:1:exon

position:89868:1
position: 89868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IKZF4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: IKZF4
product: IKAROS family zinc finger 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004237072.1
SIO_010081: IKZF4
so part of: IKZF4
location: join(62869..63375,72025..72261,74767..74934,78353..78493,83470..83542,83640..83765,88598..89353,89753..90427)
location: region:62869-90427:1
so has part: feature:62869-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83470-83542:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89353:1:exon
so has part: feature:89753-90427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62869-63375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83470-83542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88598-89353:1:exon

position:89353:1
position: 89353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89753-90427:1:exon

position:89753:1
position: 89753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IKZF4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: IKZF4
product: IKAROS family zinc finger 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004237073.1
SIO_010081: IKZF4
so part of: IKZF4
location: join(62869..63375,72025..72261,74767..74934,78353..78493,83470..83542,83640..83765,88598..89353,89868..90427)
location: region:62869-90427:1
so has part: feature:62869-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83470-83542:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89353:1:exon
so has part: feature:89868-90427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62869-63375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83470-83542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88598-89353:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89868-90427:1:exon

IKZF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IKZF4
product: IKAROS family zinc finger 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_032094189.1
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(62869..63375,72025..72261,74767..74934,78353..78493,83470..83542,83640..83765,88598..89325,89525..90427)
location: region:62869-90427:1
so has part: feature:62869-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83470-83542:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89325:1:exon
so has part: feature:89525-90427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62869-63375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83470-83542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88598-89325:1:exon

position:89325:1
position: 89325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89525-90427:1:exon

position:89525:1
position: 89525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IKZF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IKZF4
product: IKAROS family zinc finger 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_032094188.1
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(62869..63375,72025..72261,74767..74934,78353..78493,83470..83542,83640..83765,88598..89557)
location: region:62869-89557:1
so has part: feature:62869-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83470-83542:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62869-63375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83470-83542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88598-89557:1:exon

IKZF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IKZF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Eos isoform X1
translation: MGFGIGNGIGNGIGNGSESRPLPKSEGGSGSGIPPGSNPGHSQVQGGDWDREWEGIQFPVWAFPVPSLTLPIPSLTSPCSQSDPSRSQFDPSHSQFDPSHSQFDPSHSQFDPSHSQFDPSHSQSDQSLFPQVAGIPPWSRNSARPWWERPPGAPPAPARPLGHPPIPSRWRCPRTRSPRAACWPRRTRRGWARILCPSPSRSPSRSRIPRAGSAFPTGSSSATCAGWFASAPTCSWCTSAATPASGRSSASSAARPSHRRGTCCATSSCTRGRSPSSAPSAPTPAGAATPSAGTCAPIPSPLPPWGSPTSAARAAAATNSRAAWRSTGSAATASCGASLRKTPLSQRQERAPLEAGGIRERLPAPRGHARGEEIRELDMVPEALLHPERPTFIERLAGSFTKRKRSTPQKFVGEKQMRFALSELPFDVSPGFEKDVDVVPARGHPLDPPYAGPLSLLGAGDPLRPLRLATNCITEVTPVISSVYTQIQALPARLELPRGREASEDGPEGIPVIFRSRDPGGSPSNGCQDSTDTESIQEERPGGSSRHSPAFAKEEPKEGPEGAARCFPKDSLRVLNEDGEQLRAFCCEHCRVLFLDHVMFTIHMGCHGFRDPFECNICGYRSQDRYEFSSHIVRGEHKI
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(62884..63375,72025..72261,74767..74934,78353..78493,83470..83542,83640..83765,88598..89280)
location: region:62884-89280:1
so has part: feature:62884-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83470-83542:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89280:1:exon

XP_031950079.1
type: Protein
SIO_000068: ncbiprotein

position:62884:1
position: 62884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62884-63375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83470-83542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88598-89280:1:exon

IKZF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IKZF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Eos isoform X1
translation: MGFGIGNGIGNGIGNGSESRPLPKSEGGSGSGIPPGSNPGHSQVQGGDWDREWEGIQFPVWAFPVPSLTLPIPSLTSPCSQSDPSRSQFDPSHSQFDPSHSQFDPSHSQFDPSHSQFDPSHSQSDQSLFPQVAGIPPWSRNSARPWWERPPGAPPAPARPLGHPPIPSRWRCPRTRSPRAACWPRRTRRGWARILCPSPSRSPSRSRIPRAGSAFPTGSSSATCAGWFASAPTCSWCTSAATPASGRSSASSAARPSHRRGTCCATSSCTRGRSPSSAPSAPTPAGAATPSAGTCAPIPSPLPPWGSPTSAARAAAATNSRAAWRSTGSAATASCGASLRKTPLSQRQERAPLEAGGIRERLPAPRGHARGEEIRELDMVPEALLHPERPTFIERLAGSFTKRKRSTPQKFVGEKQMRFALSELPFDVSPGFEKDVDVVPARGHPLDPPYAGPLSLLGAGDPLRPLRLATNCITEVTPVISSVYTQIQALPARLELPRGREASEDGPEGIPVIFRSRDPGGSPSNGCQDSTDTESIQEERPGGSSRHSPAFAKEEPKEGPEGAARCFPKDSLRVLNEDGEQLRAFCCEHCRVLFLDHVMFTIHMGCHGFRDPFECNICGYRSQDRYEFSSHIVRGEHKI
SIO_010081: IKZF4
subclass of: SO_0000673
so part of: IKZF4
location: join(62884..63375,72025..72261,74767..74934,78353..78493,83470..83542,83640..83765,88598..89280)
location: region:62884-89280:1
so has part: feature:62884-63375:1:exon
so has part: feature:72025-72261:1:exon
so has part: feature:74767-74934:1:exon
so has part: feature:78353-78493:1:exon
so has part: feature:83470-83542:1:exon
so has part: feature:83640-83765:1:exon
so has part: feature:88598-89280:1:exon

XP_031950080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62884-63375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72025-72261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74767-74934:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78353-78493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83470-83542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83640-83765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88598-89280:1:exon

LOC116436800
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436800
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 79758..80588
location: region:79758-80588:1
so has part: feature:79758-80588:1:exon
subclass of: SO_0000011

116436800
type: Gene
SIO_000068: ncbigene

position:79758:1
position: 79758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80588:1
position: 80588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79758-80588:1:exon

LOC116436800
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436800
product: uncharacterized LOC116436800, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004237074.1
SIO_010081: LOC116436800
subclass of: SO_0000673
so part of: LOC116436800
location: join(79758..80370,80412..80588)
location: region:79758-80588:1
so has part: feature:79758-80370:1:exon
so has part: feature:80412-80588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79758-80370:1:exon

position:80370:1
position: 80370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80412-80588:1:exon

position:80412:1
position: 80412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436800
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436800
product: uncharacterized LOC116436800, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XR_004237075.1
SIO_010081: LOC116436800
subclass of: SO_0000673
so part of: LOC116436800
location: join(79758..80370,80456..80588)
location: region:79758-80588:1
so has part: feature:79758-80370:1:exon
so has part: feature:80456-80588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79758-80370:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80456-80588:1:exon

position:80456:1
position: 80456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436801
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436801
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(85185..86047)
location: region:85185-86047:-1
so has part: feature:85185-86047:-1:exon
subclass of: SO_0000011

116436801
type: Gene
SIO_000068: ncbigene

position:85185:-1
position: 85185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86047:-1
position: 86047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85185-86047:-1:exon

LOC116436801
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436801
product: uncharacterized LOC116436801
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004237076.1
SIO_010081: LOC116436801
subclass of: SO_0000673
so part of: LOC116436801
location: complement(join(85185..85263,85573..85598,86032..86047))
location: region:85185-86047:-1
so has part: feature:86032-86047:-1:exon
so has part: feature:85573-85598:-1:exon
so has part: feature:85185-85263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86032-86047:-1:exon

position:86032:-1
position: 86032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85573-85598:-1:exon

position:85573:-1
position: 85573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85598:-1
position: 85598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85185-85263:-1:exon

position:85263:-1
position: 85263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS26
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: RPS26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 95003..99921
location: region:95003-99921:1
so has part: feature:95003-99921:1:exon
subclass of: SO_0000010

116436839
type: Gene
SIO_000068: ncbigene

position:95003:1
position: 95003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99921:1
position: 99921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95003-99921:1:exon

RPS26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RPS26
product: ribosomal protein S26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032094253.1
SIO_010081: RPS26
subclass of: SO_0000673
so part of: RPS26
location: join(95003..95401,96171..96348,97903..98033,99827..99921)
location: region:95003-99921:1
so has part: feature:95003-95401:1:exon
so has part: feature:96171-96348:1:exon
so has part: feature:97903-98033:1:exon
so has part: feature:99827-99921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95003-95401:1:exon

position:95401:1
position: 95401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96171-96348:1:exon

position:96171:1
position: 96171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96348:1
position: 96348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97903-98033:1:exon

position:97903:1
position: 97903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98033:1
position: 98033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99827-99921:1:exon

position:99827:1
position: 99827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RPS26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S26
translation: MDRRGPPPYPFGLHFPAAPAARALRVTSHARRGKPHASRAARIPPPLAGKIVPISPPLPLILPPNSRRSPPLPPAPVPRAELLRGRFGGPRRGRSGGGGGASGRRERTDITTAVLRPRLFRRSLRAAMTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDSYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM
SIO_010081: RPS26
subclass of: SO_0000673
so part of: RPS26
location: join(95018..95401,96171..96348,97903..98033,99827..99862)
location: region:95018-99862:1
so has part: feature:95018-95401:1:exon
so has part: feature:96171-96348:1:exon
so has part: feature:97903-98033:1:exon
so has part: feature:99827-99862:1:exon

XP_031950144.1
type: Protein
SIO_000068: ncbiprotein

position:95018:1
position: 95018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99862:1
position: 99862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95018-95401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96171-96348:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97903-98033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99827-99862:1:exon

ERBB3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ERBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 100938..133523
location: region:100938-133523:1
so has part: feature:100938-133523:1:exon
subclass of: SO_0000010

116436827
type: Gene
SIO_000068: ncbigene

position:100938:1
position: 100938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133523:1
position: 133523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100938-133523:1:exon

ERBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ERBB3
product: erb-b2 receptor tyrosine kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_032094236.1
SIO_010081: ERBB3
subclass of: SO_0000673
so part of: ERBB3
location: join(100938..101083,104582..104733,105602..105788,106847..106972,107090..107155,107263..107381,109005..109146,109228..109341,109415..109535,109624..109697,109787..109877,111610..111809,115331..115463,117183..117273,118099..118253,119313..119366,119746..119887,120970..121089,122066..122164,123388..123573,123652..123807,125098..125173,125248..125394,126988..127085,127916..128074,129503..129568,130591..130858,132347..133523)
location: region:100938-133523:1
so has part: feature:100938-101083:1:exon
so has part: feature:104582-104733:1:exon
so has part: feature:105602-105788:1:exon
so has part: feature:106847-106972:1:exon
so has part: feature:107090-107155:1:exon
so has part: feature:107263-107381:1:exon
so has part: feature:109005-109146:1:exon
so has part: feature:109228-109341:1:exon
so has part: feature:109415-109535:1:exon
so has part: feature:109624-109697:1:exon
so has part: feature:109787-109877:1:exon
so has part: feature:111610-111809:1:exon
so has part: feature:115331-115463:1:exon
so has part: feature:117183-117273:1:exon
so has part: feature:118099-118253:1:exon
so has part: feature:119313-119366:1:exon
so has part: feature:119746-119887:1:exon
so has part: feature:120970-121089:1:exon
so has part: feature:122066-122164:1:exon
so has part: feature:123388-123573:1:exon
so has part: feature:123652-123807:1:exon
so has part: feature:125098-125173:1:exon
so has part: feature:125248-125394:1:exon
so has part: feature:126988-127085:1:exon
so has part: feature:127916-128074:1:exon
so has part: feature:129503-129568:1:exon
so has part: feature:130591-130858:1:exon
so has part: feature:132347-133523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100938-101083:1:exon

position:101083:1
position: 101083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104582-104733:1:exon

position:104582:1
position: 104582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104733:1
position: 104733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105602-105788:1:exon

position:105602:1
position: 105602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105788:1
position: 105788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:106847-106972:1:exon

position:106847:1
position: 106847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106972:1
position: 106972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107090-107155:1:exon

position:107090:1
position: 107090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107155:1
position: 107155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107263-107381:1:exon

position:107263:1
position: 107263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107381:1
position: 107381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:109005-109146:1:exon

position:109005:1
position: 109005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109146:1
position: 109146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:109228-109341:1:exon

position:109228:1
position: 109228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109341:1
position: 109341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:109415-109535:1:exon

position:109415:1
position: 109415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109535:1
position: 109535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:109624-109697:1:exon

position:109624:1
position: 109624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109697:1
position: 109697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:109787-109877:1:exon

position:109787:1
position: 109787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109877:1
position: 109877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:111610-111809:1:exon

position:111610:1
position: 111610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111809:1
position: 111809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:115331-115463:1:exon

position:115331:1
position: 115331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115463:1
position: 115463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:117183-117273:1:exon

position:117183:1
position: 117183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117273:1
position: 117273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:118099-118253:1:exon

position:118099:1
position: 118099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118253:1
position: 118253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:119313-119366:1:exon

position:119313:1
position: 119313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119366:1
position: 119366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:119746-119887:1:exon

position:119746:1
position: 119746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119887:1
position: 119887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:120970-121089:1:exon

position:120970:1
position: 120970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121089:1
position: 121089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:122066-122164:1:exon

position:122066:1
position: 122066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122164:1
position: 122164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:123388-123573:1:exon

position:123388:1
position: 123388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123573:1
position: 123573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:123652-123807:1:exon

position:123652:1
position: 123652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123807:1
position: 123807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:125098-125173:1:exon

position:125098:1
position: 125098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125173:1
position: 125173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:125248-125394:1:exon

position:125248:1
position: 125248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125394:1
position: 125394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:126988-127085:1:exon

position:126988:1
position: 126988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127085:1
position: 127085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:127916-128074:1:exon

position:127916:1
position: 127916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128074:1
position: 128074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:129503-129568:1:exon

position:129503:1
position: 129503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129568:1
position: 129568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:130591-130858:1:exon

position:130591:1
position: 130591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130858:1
position: 130858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:132347-133523:1:exon

position:132347:1
position: 132347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ERBB3
product: erb-b2 receptor tyrosine kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_032094237.1
SIO_010081: ERBB3
subclass of: SO_0000673
so part of: ERBB3
location: join(100938..101083,104582..104733,105602..105788,106847..106972,107090..107155,107263..107381,109005..109146,109228..109341,109415..109535,109624..109697,109787..109877,111610..111809,115331..115463,117183..117273,118099..118253,119313..119366,119746..119887,120970..121089,122066..122164,123388..123573,123652..123807,125098..125173,125248..125394,126988..127085,127919..128074,129503..129568,130591..130858,132347..133523)
location: region:100938-133523:1
so has part: feature:100938-101083:1:exon
so has part: feature:104582-104733:1:exon
so has part: feature:105602-105788:1:exon
so has part: feature:106847-106972:1:exon
so has part: feature:107090-107155:1:exon
so has part: feature:107263-107381:1:exon
so has part: feature:109005-109146:1:exon
so has part: feature:109228-109341:1:exon
so has part: feature:109415-109535:1:exon
so has part: feature:109624-109697:1:exon
so has part: feature:109787-109877:1:exon
so has part: feature:111610-111809:1:exon
so has part: feature:115331-115463:1:exon
so has part: feature:117183-117273:1:exon
so has part: feature:118099-118253:1:exon
so has part: feature:119313-119366:1:exon
so has part: feature:119746-119887:1:exon
so has part: feature:120970-121089:1:exon
so has part: feature:122066-122164:1:exon
so has part: feature:123388-123573:1:exon
so has part: feature:123652-123807:1:exon
so has part: feature:125098-125173:1:exon
so has part: feature:125248-125394:1:exon
so has part: feature:126988-127085:1:exon
so has part: feature:127919-128074:1:exon
so has part: feature:129503-129568:1:exon
so has part: feature:130591-130858:1:exon
so has part: feature:132347-133523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100938-101083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104582-104733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105602-105788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106847-106972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107090-107155:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107263-107381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109005-109146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109228-109341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109415-109535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109624-109697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109787-109877:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111610-111809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115331-115463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117183-117273:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:118099-118253:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:119313-119366:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119746-119887:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120970-121089:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:122066-122164:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:123388-123573:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:123652-123807:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:125098-125173:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:125248-125394:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:126988-127085:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:127919-128074:1:exon

position:127919:1
position: 127919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:129503-129568:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:130591-130858:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:132347-133523:1:exon

ERBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ERBB3
product: erb-b2 receptor tyrosine kinase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032094238.1
SIO_010081: ERBB3
subclass of: SO_0000673
so part of: ERBB3
location: join(100938..101083,104582..104733,105602..105788,106847..106963,107090..107155,107263..107381,109005..109146,109228..109341,109415..109535,109624..109697,109787..109877,111610..111809,115331..115463,117183..117273,118099..118253,119313..119366,119746..119887,120970..121089,122066..122164,123388..123573,123652..123807,125098..125173,125248..125394,126988..127085,127916..128074,129503..129568,130591..130858,132347..133523)
location: region:100938-133523:1
so has part: feature:100938-101083:1:exon
so has part: feature:104582-104733:1:exon
so has part: feature:105602-105788:1:exon
so has part: feature:106847-106963:1:exon
so has part: feature:107090-107155:1:exon
so has part: feature:107263-107381:1:exon
so has part: feature:109005-109146:1:exon
so has part: feature:109228-109341:1:exon
so has part: feature:109415-109535:1:exon
so has part: feature:109624-109697:1:exon
so has part: feature:109787-109877:1:exon
so has part: feature:111610-111809:1:exon
so has part: feature:115331-115463:1:exon
so has part: feature:117183-117273:1:exon
so has part: feature:118099-118253:1:exon
so has part: feature:119313-119366:1:exon
so has part: feature:119746-119887:1:exon
so has part: feature:120970-121089:1:exon
so has part: feature:122066-122164:1:exon
so has part: feature:123388-123573:1:exon
so has part: feature:123652-123807:1:exon
so has part: feature:125098-125173:1:exon
so has part: feature:125248-125394:1:exon
so has part: feature:126988-127085:1:exon
so has part: feature:127916-128074:1:exon
so has part: feature:129503-129568:1:exon
so has part: feature:130591-130858:1:exon
so has part: feature:132347-133523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100938-101083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104582-104733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105602-105788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106847-106963:1:exon

position:106963:1
position: 106963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107090-107155:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107263-107381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109005-109146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109228-109341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109415-109535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109624-109697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109787-109877:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111610-111809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115331-115463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117183-117273:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:118099-118253:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:119313-119366:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119746-119887:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120970-121089:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:122066-122164:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:123388-123573:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:123652-123807:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:125098-125173:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:125248-125394:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:126988-127085:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:127916-128074:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:129503-129568:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:130591-130858:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:132347-133523:1:exon

ERBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ERBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor tyrosine-protein kinase erbB-3 isoform X1
translation: MEPHRHRERPRAVLLLLLLLRAPAPGAAQAVCAGTLNGLSVTGDAQHQYQTLHKMYNNCEIVMGNLEIVLIDHTQDLSFLQTIREVTGYILIAMNVFAALPLRSLRVIRGTQFYEERFALFVLLNYNPNATHALRQLGLSQLTEILAGGVYIEKNAQLCHVDTVEWRDIMRDTRLEPIVRDNGKGCPPCHESCGGHCWGPGPEDCQKLTKTICAPQCNGRCFGRAPNECCHEECAGGCTGPLRTHCFACRHFNDSGACVPLCPQPLIYNKLTFQLEPNPDTKYQYGGVCVRECPHNFVVDQSSCVRACPNDKMEVEKNGLKICEPCAGLCPKACEGTGAGSKYQTVDSSNIDTFINCTKILGNLDFLITGLEGDPWRNISALDPEKLNVFRTVREITGYLNIQSWPKHMHNFSVFSNLETIGGRSLYNRGFSLLIMKNENVTSLGLRSLREVSAGRVYITENRRLCFLHTVHWAALSRSRADLDIRNNRPRSKCQQEGKVCDPLCSAEGCWGPGPGQCLSCRYYSRRGVCVSTCRFTEGDTREFSQDGECSECHPECERIEGGPTCNGSGADTCTRCAHYRDGPHCVERCPDGVLGERGPIYKFPDGGRECRACHENCTRGCVGPLLRDCLGDTLPVSRRTPTLVAVMVVGGGFLSCSLVLLALLYWRGKKIQKKRAMRRYLERGESLEPLDPSEKANKVLARIFKETELKRLKVLGSGVFGTVHKGIWIPDGDSIKIPVSIKVIQDWSGQQSFHAVTDHMLAIGSLDHSYIVRLLGICPGPQLQLVTQLLPLGSLLEYVRKNRDSISPQLLLNWCVQVAKGMYYLEEHRMVHRNLAARNVLLKSPSQVQVADFGIADLLYPDDKKYFYNEVKTPIKWMALESIHFGKYTHQSDVWSYGVTLWEMMTFGAEPYAGIRLAEVPDLLEKGERLSQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKQESGAAPPAEPPTLSDKELDEVETLELEEEEELEPFGLGPGLCPQRPRGSCARSPSLLSPPAGYIPMNQPGFTRTAGGSRPLRRSRQESLGRTVSESSEGRGTASELELGEGGSLAGSLCRSLRSRGGDSAYLSQRESFPPPPPSSEGSEEDPNGYVTPNCAHRDSDPAGVSLPEPQEEEEEEYEYMNRRPGGAPGAPQPRPASLEELGYEYMEVGSEPGGPPGAPLGRGAPQHDEDEEDEEEDYEYMNKQPRLSRSLGSDPGGGVPGPPLPRHDGYTDMRPGDTSATSPEEEEEEEDDEEQGYEEMDAVVTPRCPGCRGPPGTPMKPLRSLEASDCAFDNPDYWHSRLFAKADAQRT
SIO_010081: ERBB3
subclass of: SO_0000673
so part of: ERBB3
location: join(100993..101083,104582..104733,105602..105788,106847..106972,107090..107155,107263..107381,109005..109146,109228..109341,109415..109535,109624..109697,109787..109877,111610..111809,115331..115463,117183..117273,118099..118253,119313..119366,119746..119887,120970..121089,122066..122164,123388..123573,123652..123807,125098..125173,125248..125394,126988..127085,127916..128074,129503..129568,130591..130858,132347..132930)
location: region:100993-132930:1
so has part: feature:100993-101083:1:exon
so has part: feature:104582-104733:1:exon
so has part: feature:105602-105788:1:exon
so has part: feature:106847-106972:1:exon
so has part: feature:107090-107155:1:exon
so has part: feature:107263-107381:1:exon
so has part: feature:109005-109146:1:exon
so has part: feature:109228-109341:1:exon
so has part: feature:109415-109535:1:exon
so has part: feature:109624-109697:1:exon
so has part: feature:109787-109877:1:exon
so has part: feature:111610-111809:1:exon
so has part: feature:115331-115463:1:exon
so has part: feature:117183-117273:1:exon
so has part: feature:118099-118253:1:exon
so has part: feature:119313-119366:1:exon
so has part: feature:119746-119887:1:exon
so has part: feature:120970-121089:1:exon
so has part: feature:122066-122164:1:exon
so has part: feature:123388-123573:1:exon
so has part: feature:123652-123807:1:exon
so has part: feature:125098-125173:1:exon
so has part: feature:125248-125394:1:exon
so has part: feature:126988-127085:1:exon
so has part: feature:127916-128074:1:exon
so has part: feature:129503-129568:1:exon
so has part: feature:130591-130858:1:exon
so has part: feature:132347-132930:1:exon

XP_031950127.1
type: Protein
SIO_000068: ncbiprotein

position:100993:1
position: 100993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132930:1
position: 132930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100993-101083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104582-104733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105602-105788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106847-106972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107090-107155:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107263-107381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109005-109146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109228-109341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109415-109535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109624-109697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109787-109877:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111610-111809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115331-115463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117183-117273:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:118099-118253:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:119313-119366:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119746-119887:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120970-121089:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:122066-122164:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:123388-123573:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:123652-123807:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:125098-125173:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:125248-125394:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:126988-127085:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:127916-128074:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:129503-129568:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:130591-130858:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:132347-132930:1:exon

ERBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ERBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor tyrosine-protein kinase erbB-3 isoform X2
translation: MEPHRHRERPRAVLLLLLLLRAPAPGAAQAVCAGTLNGLSVTGDAQHQYQTLHKMYNNCEIVMGNLEIVLIDHTQDLSFLQTIREVTGYILIAMNVFAALPLRSLRVIRGTQFYEERFALFVLLNYNPNATHALRQLGLSQLTEILAGGVYIEKNAQLCHVDTVEWRDIMRDTRLEPIVRDNGKGCPPCHESCGGHCWGPGPEDCQKLTKTICAPQCNGRCFGRAPNECCHEECAGGCTGPLRTHCFACRHFNDSGACVPLCPQPLIYNKLTFQLEPNPDTKYQYGGVCVRECPHNFVVDQSSCVRACPNDKMEVEKNGLKICEPCAGLCPKACEGTGAGSKYQTVDSSNIDTFINCTKILGNLDFLITGLEGDPWRNISALDPEKLNVFRTVREITGYLNIQSWPKHMHNFSVFSNLETIGGRSLYNRGFSLLIMKNENVTSLGLRSLREVSAGRVYITENRRLCFLHTVHWAALSRSRADLDIRNNRPRSKCQQEGKVCDPLCSAEGCWGPGPGQCLSCRYYSRRGVCVSTCRFTEGDTREFSQDGECSECHPECERIEGGPTCNGSGADTCTRCAHYRDGPHCVERCPDGVLGERGPIYKFPDGGRECRACHENCTRGCVGPLLRDCLGDTLPVSRRTPTLVAVMVVGGGFLSCSLVLLALLYWRGKKIQKKRAMRRYLERGESLEPLDPSEKANKVLARIFKETELKRLKVLGSGVFGTVHKGIWIPDGDSIKIPVSIKVIQDWSGQQSFHAVTDHMLAIGSLDHSYIVRLLGICPGPQLQLVTQLLPLGSLLEYVRKNRDSISPQLLLNWCVQVAKGMYYLEEHRMVHRNLAARNVLLKSPSQVQVADFGIADLLYPDDKKYFYNEVKTPIKWMALESIHFGKYTHQSDVWSYGVTLWEMMTFGAEPYAGIRLAEVPDLLEKGERLSQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKESGAAPPAEPPTLSDKELDEVETLELEEEEELEPFGLGPGLCPQRPRGSCARSPSLLSPPAGYIPMNQPGFTRTAGGSRPLRRSRQESLGRTVSESSEGRGTASELELGEGGSLAGSLCRSLRSRGGDSAYLSQRESFPPPPPSSEGSEEDPNGYVTPNCAHRDSDPAGVSLPEPQEEEEEEYEYMNRRPGGAPGAPQPRPASLEELGYEYMEVGSEPGGPPGAPLGRGAPQHDEDEEDEEEDYEYMNKQPRLSRSLGSDPGGGVPGPPLPRHDGYTDMRPGDTSATSPEEEEEEEDDEEQGYEEMDAVVTPRCPGCRGPPGTPMKPLRSLEASDCAFDNPDYWHSRLFAKADAQRT
SIO_010081: ERBB3
subclass of: SO_0000673
so part of: ERBB3
location: join(100993..101083,104582..104733,105602..105788,106847..106972,107090..107155,107263..107381,109005..109146,109228..109341,109415..109535,109624..109697,109787..109877,111610..111809,115331..115463,117183..117273,118099..118253,119313..119366,119746..119887,120970..121089,122066..122164,123388..123573,123652..123807,125098..125173,125248..125394,126988..127085,127919..128074,129503..129568,130591..130858,132347..132930)
location: region:100993-132930:1
so has part: feature:100993-101083:1:exon
so has part: feature:104582-104733:1:exon
so has part: feature:105602-105788:1:exon
so has part: feature:106847-106972:1:exon
so has part: feature:107090-107155:1:exon
so has part: feature:107263-107381:1:exon
so has part: feature:109005-109146:1:exon
so has part: feature:109228-109341:1:exon
so has part: feature:109415-109535:1:exon
so has part: feature:109624-109697:1:exon
so has part: feature:109787-109877:1:exon
so has part: feature:111610-111809:1:exon
so has part: feature:115331-115463:1:exon
so has part: feature:117183-117273:1:exon
so has part: feature:118099-118253:1:exon
so has part: feature:119313-119366:1:exon
so has part: feature:119746-119887:1:exon
so has part: feature:120970-121089:1:exon
so has part: feature:122066-122164:1:exon
so has part: feature:123388-123573:1:exon
so has part: feature:123652-123807:1:exon
so has part: feature:125098-125173:1:exon
so has part: feature:125248-125394:1:exon
so has part: feature:126988-127085:1:exon
so has part: feature:127919-128074:1:exon
so has part: feature:129503-129568:1:exon
so has part: feature:130591-130858:1:exon
so has part: feature:132347-132930:1:exon

XP_031950128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100993-101083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104582-104733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105602-105788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106847-106972:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107090-107155:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107263-107381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109005-109146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109228-109341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109415-109535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109624-109697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109787-109877:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111610-111809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115331-115463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117183-117273:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:118099-118253:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:119313-119366:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119746-119887:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120970-121089:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:122066-122164:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:123388-123573:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:123652-123807:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:125098-125173:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:125248-125394:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:126988-127085:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:127919-128074:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:129503-129568:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:130591-130858:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:132347-132930:1:exon

ERBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ERBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor tyrosine-protein kinase erbB-3 isoform X3
translation: MEPHRHRERPRAVLLLLLLLRAPAPGAAQAVCAGTLNGLSVTGDAQHQYQTLHKMYNNCEIVMGNLEIVLIDHTQDLSFLQTIREVTGYILIAMNVFAALPLRSLRVIRGTQFYEERFALFVLLNYNPNATHALRQLGLSQLTEILAGGVYIEKNAQLCHVDTVEWRDIMRDTRLEPIVRDNGPPCHESCGGHCWGPGPEDCQKLTKTICAPQCNGRCFGRAPNECCHEECAGGCTGPLRTHCFACRHFNDSGACVPLCPQPLIYNKLTFQLEPNPDTKYQYGGVCVRECPHNFVVDQSSCVRACPNDKMEVEKNGLKICEPCAGLCPKACEGTGAGSKYQTVDSSNIDTFINCTKILGNLDFLITGLEGDPWRNISALDPEKLNVFRTVREITGYLNIQSWPKHMHNFSVFSNLETIGGRSLYNRGFSLLIMKNENVTSLGLRSLREVSAGRVYITENRRLCFLHTVHWAALSRSRADLDIRNNRPRSKCQQEGKVCDPLCSAEGCWGPGPGQCLSCRYYSRRGVCVSTCRFTEGDTREFSQDGECSECHPECERIEGGPTCNGSGADTCTRCAHYRDGPHCVERCPDGVLGERGPIYKFPDGGRECRACHENCTRGCVGPLLRDCLGDTLPVSRRTPTLVAVMVVGGGFLSCSLVLLALLYWRGKKIQKKRAMRRYLERGESLEPLDPSEKANKVLARIFKETELKRLKVLGSGVFGTVHKGIWIPDGDSIKIPVSIKVIQDWSGQQSFHAVTDHMLAIGSLDHSYIVRLLGICPGPQLQLVTQLLPLGSLLEYVRKNRDSISPQLLLNWCVQVAKGMYYLEEHRMVHRNLAARNVLLKSPSQVQVADFGIADLLYPDDKKYFYNEVKTPIKWMALESIHFGKYTHQSDVWSYGVTLWEMMTFGAEPYAGIRLAEVPDLLEKGERLSQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKQESGAAPPAEPPTLSDKELDEVETLELEEEEELEPFGLGPGLCPQRPRGSCARSPSLLSPPAGYIPMNQPGFTRTAGGSRPLRRSRQESLGRTVSESSEGRGTASELELGEGGSLAGSLCRSLRSRGGDSAYLSQRESFPPPPPSSEGSEEDPNGYVTPNCAHRDSDPAGVSLPEPQEEEEEEYEYMNRRPGGAPGAPQPRPASLEELGYEYMEVGSEPGGPPGAPLGRGAPQHDEDEEDEEEDYEYMNKQPRLSRSLGSDPGGGVPGPPLPRHDGYTDMRPGDTSATSPEEEEEEEDDEEQGYEEMDAVVTPRCPGCRGPPGTPMKPLRSLEASDCAFDNPDYWHSRLFAKADAQRT
SIO_010081: ERBB3
subclass of: SO_0000673
so part of: ERBB3
location: join(100993..101083,104582..104733,105602..105788,106847..106963,107090..107155,107263..107381,109005..109146,109228..109341,109415..109535,109624..109697,109787..109877,111610..111809,115331..115463,117183..117273,118099..118253,119313..119366,119746..119887,120970..121089,122066..122164,123388..123573,123652..123807,125098..125173,125248..125394,126988..127085,127916..128074,129503..129568,130591..130858,132347..132930)
location: region:100993-132930:1
so has part: feature:100993-101083:1:exon
so has part: feature:104582-104733:1:exon
so has part: feature:105602-105788:1:exon
so has part: feature:106847-106963:1:exon
so has part: feature:107090-107155:1:exon
so has part: feature:107263-107381:1:exon
so has part: feature:109005-109146:1:exon
so has part: feature:109228-109341:1:exon
so has part: feature:109415-109535:1:exon
so has part: feature:109624-109697:1:exon
so has part: feature:109787-109877:1:exon
so has part: feature:111610-111809:1:exon
so has part: feature:115331-115463:1:exon
so has part: feature:117183-117273:1:exon
so has part: feature:118099-118253:1:exon
so has part: feature:119313-119366:1:exon
so has part: feature:119746-119887:1:exon
so has part: feature:120970-121089:1:exon
so has part: feature:122066-122164:1:exon
so has part: feature:123388-123573:1:exon
so has part: feature:123652-123807:1:exon
so has part: feature:125098-125173:1:exon
so has part: feature:125248-125394:1:exon
so has part: feature:126988-127085:1:exon
so has part: feature:127916-128074:1:exon
so has part: feature:129503-129568:1:exon
so has part: feature:130591-130858:1:exon
so has part: feature:132347-132930:1:exon

XP_031950129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100993-101083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104582-104733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105602-105788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106847-106963:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107090-107155:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107263-107381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109005-109146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:109228-109341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109415-109535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109624-109697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109787-109877:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111610-111809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115331-115463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:117183-117273:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:118099-118253:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:119313-119366:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119746-119887:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:120970-121089:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:122066-122164:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:123388-123573:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:123652-123807:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:125098-125173:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:125248-125394:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:126988-127085:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:127916-128074:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:129503-129568:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:130591-130858:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:132347-132930:1:exon

PA2G4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PA2G4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 134290..146247
location: region:134290-146247:1
so has part: feature:134290-146247:1:exon
subclass of: SO_0000010

116436819
type: Gene
SIO_000068: ncbigene

position:134290:1
position: 134290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146247:1
position: 146247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134290-146247:1:exon

PA2G4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PA2G4
product: proliferation-associated 2G4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032094225.1
SIO_010081: PA2G4
subclass of: SO_0000673
so part of: PA2G4
location: join(134290..134416,136952..137080,138614..138719,138962..139031,140872..140964,141255..141318,146165..146247)
location: region:134290-146247:1
so has part: feature:134290-134416:1:exon
so has part: feature:136952-137080:1:exon
so has part: feature:138614-138719:1:exon
so has part: feature:138962-139031:1:exon
so has part: feature:140872-140964:1:exon
so has part: feature:141255-141318:1:exon
so has part: feature:146165-146247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134290-134416:1:exon

position:134416:1
position: 134416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136952-137080:1:exon

position:136952:1
position: 136952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137080:1
position: 137080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138614-138719:1:exon

position:138614:1
position: 138614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138719:1
position: 138719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:138962-139031:1:exon

position:138962:1
position: 138962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139031:1
position: 139031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:140872-140964:1:exon

position:140872:1
position: 140872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140964:1
position: 140964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141255-141318:1:exon

position:141255:1
position: 141255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141318:1
position: 141318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:146165-146247:1:exon

position:146165:1
position: 146165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PA2G4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PA2G4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proliferation-associated protein 2G4
translation: MSGEEEAAELTIAEDLVVTKYKMGGDIANRVLRAVVEAANPGASVLCLCEKGDSMIMEETGKIFKKEKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKDGDLVKIDLGVHVDGFIANVAHTFVLGASKEKPVSGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKIAHSFHCTPIEGMLSHQLKQHVIDGEKTIIQNPSDQQK
SIO_010081: PA2G4
subclass of: SO_0000673
so part of: PA2G4
location: join(134329..134416,136952..137080,138614..138719,138962..139031,140872..140964,141255..141318,146165..146247)
location: region:134329-146247:1
so has part: feature:134329-134416:1:exon
so has part: feature:136952-137080:1:exon
so has part: feature:138614-138719:1:exon
so has part: feature:138962-139031:1:exon
so has part: feature:140872-140964:1:exon
so has part: feature:141255-141318:1:exon
so has part: feature:146165-146247:1:exon

XP_031950116.1
type: Protein
SIO_000068: ncbiprotein

position:134329:1
position: 134329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134329-134416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136952-137080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138614-138719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:138962-139031:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140872-140964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141255-141318:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146165-146247:1:exon

LOC116436818
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 139039..140865
location: region:139039-140865:1
so has part: feature:139039-140865:1:exon
subclass of: SO_0000010

116436818
type: Gene
SIO_000068: ncbigene

position:139039:1
position: 139039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140865:1
position: 140865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139039-140865:1:exon

LOC116436818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436818
product: uncharacterized LOC116436818, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032094224.1
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139039..139552,139584..139738,140049..140165,140197..140865)
location: region:139039-140865:1
so has part: feature:139039-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:140049-140165:1:exon
so has part: feature:140197-140865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139039-139552:1:exon

position:139552:1
position: 139552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

position:139584:1
position: 139584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139738:1
position: 139738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140049-140165:1:exon

position:140049:1
position: 140049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140165:1
position: 140165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:140197-140865:1:exon

position:140197:1
position: 140197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436818
product: uncharacterized LOC116436818, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032094217.1
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139039..139552,139584..139738,140111..140865)
location: region:139039-140865:1
so has part: feature:139039-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:140111-140865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139039-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140111-140865:1:exon

position:140111:1
position: 140111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436818
product: uncharacterized LOC116436818, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032094222.1
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139039..139552,139584..139738,140111..140296,140328..140865)
location: region:139039-140865:1
so has part: feature:139039-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:140111-140296:1:exon
so has part: feature:140328-140865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139039-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140111-140296:1:exon

position:140296:1
position: 140296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:140328-140865:1:exon

position:140328:1
position: 140328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436818
product: uncharacterized LOC116436818, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032094223.1
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139039..139552,139584..139738,140111..140234,140266..140865)
location: region:139039-140865:1
so has part: feature:139039-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:140111-140234:1:exon
so has part: feature:140266-140865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139039-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140111-140234:1:exon

position:140234:1
position: 140234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:140266-140865:1:exon

position:140266:1
position: 140266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436818
product: uncharacterized LOC116436818, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032094219.1
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139039..139552,139584..139738,140111..140165,140197..140865)
location: region:139039-140865:1
so has part: feature:139039-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:140111-140165:1:exon
so has part: feature:140197-140865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139039-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140111-140165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140197-140865:1:exon

LOC116436818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436818
product: uncharacterized LOC116436818, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032094221.1
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139039..139335,139615..139738,140049..140165,140197..140865)
location: region:139039-140865:1
so has part: feature:139039-139335:1:exon
so has part: feature:139615-139738:1:exon
so has part: feature:140049-140165:1:exon
so has part: feature:140197-140865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139039-139335:1:exon

position:139335:1
position: 139335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139615-139738:1:exon

position:139615:1
position: 139615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140049-140165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140197-140865:1:exon

LOC116436818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436818
product: uncharacterized LOC116436818, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032094220.1
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139039..139335,139615..139738,140111..140865)
location: region:139039-140865:1
so has part: feature:139039-139335:1:exon
so has part: feature:139615-139738:1:exon
so has part: feature:140111-140865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139039-139335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139615-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140111-140865:1:exon

LOC116436818
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: LOC116436818
product: uncharacterized LOC116436818, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_004237082.1
SIO_010081: LOC116436818
so part of: LOC116436818
location: join(139039..139552,139584..139738,139925..140036)
location: region:139039-140036:1
so has part: feature:139039-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:139925-140036:1:exon

position:140036:1
position: 140036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139039-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139925-140036:1:exon

position:139925:1
position: 139925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436818
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: LOC116436818
product: uncharacterized LOC116436818, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_004237081.1
SIO_010081: LOC116436818
so part of: LOC116436818
location: join(139039..139552,139584..139614,139894..140036)
location: region:139039-140036:1
so has part: feature:139039-139552:1:exon
so has part: feature:139584-139614:1:exon
so has part: feature:139894-140036:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139039-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139614:1:exon

position:139614:1
position: 139614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139894-140036:1:exon

position:139894:1
position: 139894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436818 isoform X3
translation: MPGGTSLECQDARWQHPGISGCQAAVPWNLGMPGGSTLESRDAGWQHPGISGCRVAAPWNLGMLGGSTLEPRDAGWQHPGTSGCWVAAPWNLGMPGGTSLETQDPRWQRPGGSGSKVAPPWIFWIQGGTIPESLDPRWHHPKISGSEVAPSQNLQIRGGTIPKSLNPGWHHPGIPGSELAPSRNLWIRGGTIPESPDPSWHHSGALEEQSPLPTFPAPMAQDGHSHSHSPKPVPASHFSPGILPWEFRLSRPSSGNKSRGVASAKARSCLGNGFWDHSLGRNPKFPTGILLESSQSVFLTSWESWSVPIEGCQDWESAGIPFGSGFGVVHEGIMKELRGFSTSPPDSQLSQGTEPIPTLEFPPPAKSQP
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139081..139335,139615..139738,140111..140841)
location: region:139081-140841:1
so has part: feature:139081-139335:1:exon
so has part: feature:139615-139738:1:exon
so has part: feature:140111-140841:1:exon

XP_031950111.1
type: Protein
SIO_000068: ncbiprotein

position:139081:1
position: 139081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140841:1
position: 140841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139081-139335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139615-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140111-140841:1:exon

LOC116436818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436818 isoform X1
translation: MSGCQVAAPWNLGMPGSSALEPRDARWQHPGISGCRVAAPWNLGMPGGSTLEPRDVGWQHPGTSGCWVAAPWNLGMLGGSTLEPRDVGWQCPGTLGSEVPPSQHLWIQGATILECQDLGWHHPGTSGSKVASLWSLWIQGATIPECQDLRWHHPKISGSKVAAPWNLGMPGGTSLETQDPRWQRPGGSGSKVAPPWIFWIQGGTIPESLDPRWHHPKISGSEVAPSQNLQIRGGTIPKSLNPGWHHPGIPGSELAPSRNLWIRGGTIPESPDPSWHHSGALEEQSPLPTFPAPMAQDGHSHSHSPKPVPASHFSPGILPWEFRLSRPSSGNKSRGVASAKARSCLGNGFWDHSLGRNPKFPTGILLESSQSVFLTSWESWSVPIEGCQDWESAGIPFGSGFGVVHEGIMKELRGFSTSPPDSQLSQGTEPIPTLEFPPPAKSQP
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139104..139552,139584..139738,140111..140841)
location: region:139104-140841:1
so has part: feature:139104-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:140111-140841:1:exon

XP_031950108.1
type: Protein
SIO_000068: ncbiprotein

position:139104:1
position: 139104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139104-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140111-140841:1:exon

LOC116436818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436818 isoform X5
translation: MSGCQVAAPWNLGMPGSSALEPRDARWQHPGISGCRVAAPWNLGMPGGSTLEPRDVGWQHPGTSGCWVAAPWNLGMLGGSTLEPRDVGWQCPGTLGSEVPPSQHLWIQGATILECQDLGWHHPGTSGSKVASLWSLWIQGATIPECQDLRWHHPKISGSKVAAPWNLGMPGGTSLETQDPRWQRPGGSGSKVAPPWIFWIQGGTIPESLDPRWHHPKISGSEVAPSQNLQIRGGTIPKSLNPGWHHPGIPGSELAPSRNLWIRAGTTPEPWRSSPRFPLFLLQWPRMDIPIPIPQNQSLLPTFPLEFCRGNSGYPVHPPGINPEAWPRQRHGAASGMAFGTTRWGETQNSPLEFCWNLPNPCF
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139104..139552,139584..139738,140111..140296,140328..140629)
location: region:139104-140629:1
so has part: feature:139104-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:140111-140296:1:exon
so has part: feature:140328-140629:1:exon

XP_031950113.1
type: Protein
SIO_000068: ncbiprotein

position:140629:1
position: 140629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139104-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140111-140296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140328-140629:1:exon

LOC116436818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436818 isoform X6
translation: MSGCQVAAPWNLGMPGSSALEPRDARWQHPGISGCRVAAPWNLGMPGGSTLEPRDVGWQHPGTSGCWVAAPWNLGMLGGSTLEPRDVGWQCPGTLGSEVPPSQHLWIQGATILECQDLGWHHPGTSGSKVASLWSLWIQGATIPECQDLRWHHPKISGSKVAAPWNLGMPGGTSLETQDPRWQRPGGSGSKVAPPWIFWIQGGTIPESLDPRWHHPKISGSEVAPSQNLQIRGGTIPKSLNPGWHHPGISGSEVAPSRNLRIRAGTTPEPWRSSPRFPLFLLQWPRMDIPIPIPQNQSLLPTFPLEFCRGNSGYPVHPPGINPEAWPRQRHGAASGMAFGTTRWGETQNSPLEFCWNLPNPCF
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139104..139552,139584..139738,140111..140234,140266..140629)
location: region:139104-140629:1
so has part: feature:139104-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:140111-140234:1:exon
so has part: feature:140266-140629:1:exon

XP_031950114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139104-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140111-140234:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140266-140629:1:exon

LOC116436818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436818 isoform X7
translation: MSGCQVAAPWNLGMPGSSALEPRDARWQHPGISGCRVAAPWNLGMPGGSTLEPRDVGWQHPGTSGCWVAAPWNLGMLGGSTLEPRDVGWQCPGTLGSEVPPSQHLWIQGATILECQDLGWHHPGTSGSKVASLWSLWIQGATIPECQDLRWHHPKISGSKVAAPWNLGMPGGTSLETQDPRWQRPGGSGSKVAPPWIFWIQGGTIPESLDPRWHHPRTSGSEVAPSQNLWIQGGTIPKSQDPRWHHPKISESRVAPSRNPWIRAGTIPESLDPRWHHPGISGSELAPLRSLGGAVPASHFSCSNGPGWTFPFPFPKTSPCFPLFPWNFAVGIPVIPSILRE
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139104..139552,139584..139738,140049..140165,140197..140501)
location: region:139104-140501:1
so has part: feature:139104-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:140049-140165:1:exon
so has part: feature:140197-140501:1:exon

XP_031950115.1
type: Protein
SIO_000068: ncbiprotein

position:140501:1
position: 140501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139104-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140049-140165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140197-140501:1:exon

LOC116436818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436818 isoform X2
translation: MPGGSTLESRDARQQCPGTSGCQVAAPWNLGMPGGSTLESRDAGWQHPGTSGCWVAAPWNLGMLGGSTLEPRDVGWQHPGTSGCWVAVPWNLGIRGATIPASLDPRCHHPGVSGSGVAPPWNLWIQGGITLEPLDPRCHHPRVSGSEVAPSQNLWIQGGSTLEPRDAGWHQPGNSGSKVATPWRFRIQSGTTLDLLDPRWHHPRISGSKVAPSQNLRIRGGTIPKSLNPGWHHPGIPGSELAPSRNLWIRGGTIPESPDPSWHHSGALEEQSPLPTFPAPMAQDGHSHSHSPKPVPASHFSPGILPWEFRLSRPSSGNKSRGVASAKARSCLGNGFWDHSLGRNPKFPTGILLESSQSVFLTSWESWSVPIEGCQDWESAGIPFGSGFGVVHEGIMKELRGFSTSPPDSQLSQGTEPIPTLEFPPPAKSQP
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139112..139552,139584..139738,140111..140165,140197..140841)
location: region:139112-140841:1
so has part: feature:139112-139552:1:exon
so has part: feature:139584-139738:1:exon
so has part: feature:140111-140165:1:exon
so has part: feature:140197-140841:1:exon

XP_031950110.1
type: Protein
SIO_000068: ncbiprotein

position:139112:1
position: 139112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139112-139552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139584-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140111-140165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140197-140841:1:exon

LOC116436818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436818 isoform X4
translation: MPGGSTLESRDARQQCPGTSGCQVAAPWNLGMPGGSTLESRDAGWQHPGTSGCWVAAPWNLGMLGGSTLEPRDVGWQHPGTSGCRVAPAWKLRIQGGNALEVQDPKWHHPGSSGSKVAPSRNLWIQGGTIPEPLDLRWHHPRISGSKVAPSQNLRIRGGTIPKSLNPGWHHPGIPGSELAPSRNLWIRGGTIPESPDPSWHHSGALEEQSPLPTFPAPMAQDGHSHSHSPKPVPASHFSPGILPWEFRLSRPSSGNKSRGVASAKARSCLGNGFWDHSLGRNPKFPTGILLESSQSVFLTSWESWSVPIEGCQDWESAGIPFGSGFGVVHEGIMKELRGFSTSPPDSQLSQGTEPIPTLEFPPPAKSQP
SIO_010081: LOC116436818
subclass of: SO_0000673
so part of: LOC116436818
location: join(139112..139335,139615..139738,140049..140165,140197..140841)
location: region:139112-140841:1
so has part: feature:139112-139335:1:exon
so has part: feature:139615-139738:1:exon
so has part: feature:140049-140165:1:exon
so has part: feature:140197-140841:1:exon

XP_031950112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139112-139335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139615-139738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140049-140165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140197-140841:1:exon

RNF41
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: RNF41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(146722..161159)
location: region:146722-161159:-1
so has part: feature:146722-161159:-1:exon
subclass of: SO_0000010

116436820
type: Gene
SIO_000068: ncbigene

position:146722:-1
position: 146722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161159:-1
position: 161159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146722-161159:-1:exon

RNF41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RNF41
product: ring finger protein 41
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032094226.1
SIO_010081: RNF41
subclass of: SO_0000673
so part of: RNF41
location: complement(join(146722..146850,148045..148180,150307..150578,152087..152199,159313..159439,161065..161159))
location: region:146722-161159:-1
so has part: feature:161065-161159:-1:exon
so has part: feature:159313-159439:-1:exon
so has part: feature:152087-152199:-1:exon
so has part: feature:150307-150578:-1:exon
so has part: feature:148045-148180:-1:exon
so has part: feature:146722-146850:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161065-161159:-1:exon

position:161065:-1
position: 161065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159313-159439:-1:exon

position:159313:-1
position: 159313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159439:-1
position: 159439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:152087-152199:-1:exon

position:152087:-1
position: 152087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152199:-1
position: 152199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150307-150578:-1:exon

position:150307:-1
position: 150307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150578:-1
position: 150578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148045-148180:-1:exon

position:148045:-1
position: 148045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148180:-1
position: 148180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:146722-146850:-1:exon

position:146850:-1
position: 146850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RNF41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase NRDP1
translation: MGYDVARFQGDVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPVPRIMRNMLSKLQITCDNAVFGCTAVVRLDNLMAHLNDCEHNPKRPVTCEQGCGLEMPKDELPNHNCIKHLRSVVQQQQLRIADLEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQNLEETIEYNEILE
SIO_010081: RNF41
subclass of: SO_0000673
so part of: RNF41
location: complement(join(146743..146850,148045..148180,150307..150578,152087..152176))
location: region:146743-152176:-1
so has part: feature:152087-152176:-1:exon
so has part: feature:150307-150578:-1:exon
so has part: feature:148045-148180:-1:exon
so has part: feature:146743-146850:-1:exon

XP_031950117.1
type: Protein
SIO_000068: ncbiprotein

position:146743:-1
position: 146743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152176:-1
position: 152176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152087-152176:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150307-150578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148045-148180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146743-146850:-1:exon

NABP2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: NABP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 161385..164757
location: region:161385-164757:1
so has part: feature:161385-164757:1:exon
subclass of: SO_0000010

116436841
type: Gene
SIO_000068: ncbigene

position:161385:1
position: 161385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164757:1
position: 164757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161385-164757:1:exon

NABP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NABP2
product: nucleic acid binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094255.1
SIO_010081: NABP2
subclass of: SO_0000673
so part of: NABP2
location: join(161385..161505,163029..163122,163224..163362,163443..163514,163601..163682,164136..164202,164284..164757)
location: region:161385-164757:1
so has part: feature:161385-161505:1:exon
so has part: feature:163029-163122:1:exon
so has part: feature:163224-163362:1:exon
so has part: feature:163443-163514:1:exon
so has part: feature:163601-163682:1:exon
so has part: feature:164136-164202:1:exon
so has part: feature:164284-164757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161385-161505:1:exon

position:161505:1
position: 161505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:163029-163122:1:exon

position:163029:1
position: 163029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163122:1
position: 163122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:163224-163362:1:exon

position:163224:1
position: 163224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163362:1
position: 163362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:163443-163514:1:exon

position:163443:1
position: 163443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163514:1
position: 163514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:163601-163682:1:exon

position:163601:1
position: 163601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163682:1
position: 163682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:164136-164202:1:exon

position:164136:1
position: 164136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164202:1
position: 164202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164284-164757:1:exon

position:164284:1
position: 164284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NABP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NABP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SOSS complex subunit B1
translation: MSTETLVKDVKPGLKNLNLIFIVLETGRVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLIQPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYVAQQSQGKGAQNESATPAAPQPPQGSPAAPPAPDSQNGNGLSPGGPAHPPAAPPHPPSGRITRSQPGHPNPVSNGKETRRSSKR
SIO_010081: NABP2
subclass of: SO_0000673
so part of: NABP2
location: join(163044..163122,163224..163362,163443..163514,163601..163682,164136..164202,164284..164444)
location: region:163044-164444:1
so has part: feature:163044-163122:1:exon
so has part: feature:163224-163362:1:exon
so has part: feature:163443-163514:1:exon
so has part: feature:163601-163682:1:exon
so has part: feature:164136-164202:1:exon
so has part: feature:164284-164444:1:exon

XP_031950146.1
type: Protein
SIO_000068: ncbiprotein

position:163044:1
position: 163044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164444:1
position: 164444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163044-163122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163224-163362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163443-163514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163601-163682:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:164136-164202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:164284-164444:1:exon

SLC39A5
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SLC39A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 165835..169501
location: region:165835-169501:1
so has part: feature:165835-169501:1:exon
subclass of: SO_0000010

116436598
type: Gene
SIO_000068: ncbigene

position:165835:1
position: 165835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169501:1
position: 169501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165835-169501:1:exon

SLC39A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SLC39A5
product: solute carrier family 39 member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093822.1
SIO_010081: SLC39A5
subclass of: SO_0000673
so part of: SLC39A5
location: join(165835..166228,166306..166459,166572..166746,167350..167519,167599..167736,167815..167875,167962..168162,168628..168708,168784..168974,169056..169501)
location: region:165835-169501:1
so has part: feature:165835-166228:1:exon
so has part: feature:166306-166459:1:exon
so has part: feature:166572-166746:1:exon
so has part: feature:167350-167519:1:exon
so has part: feature:167599-167736:1:exon
so has part: feature:167815-167875:1:exon
so has part: feature:167962-168162:1:exon
so has part: feature:168628-168708:1:exon
so has part: feature:168784-168974:1:exon
so has part: feature:169056-169501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:165835-166228:1:exon

position:166228:1
position: 166228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:166306-166459:1:exon

position:166306:1
position: 166306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166459:1
position: 166459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166572-166746:1:exon

position:166572:1
position: 166572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166746:1
position: 166746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167350-167519:1:exon

position:167350:1
position: 167350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167519:1
position: 167519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:167599-167736:1:exon

position:167599:1
position: 167599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167736:1
position: 167736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:167815-167875:1:exon

position:167815:1
position: 167815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167875:1
position: 167875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:167962-168162:1:exon

position:167962:1
position: 167962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168162:1
position: 168162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:168628-168708:1:exon

position:168628:1
position: 168628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168708:1
position: 168708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:168784-168974:1:exon

position:168784:1
position: 168784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168974:1
position: 168974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:169056-169501:1:exon

position:169056:1
position: 169056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC39A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SLC39A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter ZIP5
translation: MSPPGLLLGVLGLLALGTGGSPGTPAAPGELPEDAAQEHGYYLQQLFGQYGANGTLPFEGLARLLGSLGLGRVQVVQIQHEELGHGHVSHLDLLEVQEDKHRHSHPLWEHGGDAAPSAPTTDGPHSPPPSRTPSWVEPVPAEPPGAGGASRQFQPTLSLLGRVLGLEHSSADHPHDDCLNVTQLLVNFGLDSVPQLTPEQFTLLCPALLYQIDSRVCIQHSDEVTLPPPGGALWPALGWGLLAVVSVSLPSALAVLLVPLLSRGSFRSLLAFLVALAVGTLCGDALLHLWPHAQGRHQEPPGEPGPEVLQGLAVLGGLYLLFLLELLLGMLRRRREATGHPHGETPGLAAGVPASPRGGTELRHLTAPDPELELRRPEPPQGPSHGHSHGHSHGPALPLGSGAADIVWMVVLGDGIHNLTDGLAIGAAFSHSLSSGLSTALAVLCHELPHELGDLAVLLRAGTAPRSVLLLNLLSALLSCLGVVAGAALGQSGTPLAPWLLTATAGIFLYVALADMLPEALRGSEGPGEGTWSRFLLQNAGFLLGAGIMLGIALAEGHLRAWLQP
SIO_010081: SLC39A5
subclass of: SO_0000673
so part of: SLC39A5
location: join(165852..166228,166306..166459,166572..166746,167350..167519,167599..167736,167815..167875,167962..168162,168628..168708,168784..168974,169056..169205)
location: region:165852-169205:1
so has part: feature:165852-166228:1:exon
so has part: feature:166306-166459:1:exon
so has part: feature:166572-166746:1:exon
so has part: feature:167350-167519:1:exon
so has part: feature:167599-167736:1:exon
so has part: feature:167815-167875:1:exon
so has part: feature:167962-168162:1:exon
so has part: feature:168628-168708:1:exon
so has part: feature:168784-168974:1:exon
so has part: feature:169056-169205:1:exon

XP_031949713.1
type: Protein
SIO_000068: ncbiprotein

position:165852:1
position: 165852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169205:1
position: 169205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165852-166228:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166306-166459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166572-166746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167350-167519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167599-167736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167815-167875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167962-168162:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:168628-168708:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:168784-168974:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:169056-169205:1:exon

ANKRD52
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ANKRD52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(178375..229900)
location: region:178375-229900:-1
so has part: feature:178375-229900:-1:exon
subclass of: SO_0000010

116436699
type: Gene
SIO_000068: ncbigene

position:178375:-1
position: 178375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229900:-1
position: 229900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178375-229900:-1:exon

ANKRD52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ANKRD52
product: ankyrin repeat domain 52, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032093987.1
SIO_010081: ANKRD52
subclass of: SO_0000673
so part of: ANKRD52
location: complement(join(178375..179904,182484..182575,182787..182869,184857..184939,185074..185219,185342..185425,186387..186474,187766..187985,190948..191065,197596..197683,200002..200203,201627..201698,204281..204392,206268..206384,209360..209500,212370..212438,213554..213671,214888..214970,215413..215527,217018..217096,217189..217401,218121..218263,219133..219220,219664..219864,221487..221557,222173..222251,224606..224689,229782..229900))
location: region:178375-229900:-1
so has part: feature:229782-229900:-1:exon
so has part: feature:224606-224689:-1:exon
so has part: feature:222173-222251:-1:exon
so has part: feature:221487-221557:-1:exon
so has part: feature:219664-219864:-1:exon
so has part: feature:219133-219220:-1:exon
so has part: feature:218121-218263:-1:exon
so has part: feature:217189-217401:-1:exon
so has part: feature:217018-217096:-1:exon
so has part: feature:215413-215527:-1:exon
so has part: feature:214888-214970:-1:exon
so has part: feature:213554-213671:-1:exon
so has part: feature:212370-212438:-1:exon
so has part: feature:209360-209500:-1:exon
so has part: feature:206268-206384:-1:exon
so has part: feature:204281-204392:-1:exon
so has part: feature:201627-201698:-1:exon
so has part: feature:200002-200203:-1:exon
so has part: feature:197596-197683:-1:exon
so has part: feature:190948-191065:-1:exon
so has part: feature:187766-187985:-1:exon
so has part: feature:186387-186474:-1:exon
so has part: feature:185342-185425:-1:exon
so has part: feature:185074-185219:-1:exon
so has part: feature:184857-184939:-1:exon
so has part: feature:182787-182869:-1:exon
so has part: feature:182484-182575:-1:exon
so has part: feature:178375-179904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229782-229900:-1:exon

position:229782:-1
position: 229782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224606-224689:-1:exon

position:224606:-1
position: 224606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224689:-1
position: 224689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222173-222251:-1:exon

position:222173:-1
position: 222173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222251:-1
position: 222251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:221487-221557:-1:exon

position:221487:-1
position: 221487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221557:-1
position: 221557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:219664-219864:-1:exon

position:219664:-1
position: 219664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219864:-1
position: 219864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:219133-219220:-1:exon

position:219133:-1
position: 219133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219220:-1
position: 219220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:218121-218263:-1:exon

position:218121:-1
position: 218121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218263:-1
position: 218263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:217189-217401:-1:exon

position:217189:-1
position: 217189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217401:-1
position: 217401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:217018-217096:-1:exon

position:217018:-1
position: 217018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217096:-1
position: 217096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:215413-215527:-1:exon

position:215413:-1
position: 215413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215527:-1
position: 215527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:214888-214970:-1:exon

position:214888:-1
position: 214888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214970:-1
position: 214970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:213554-213671:-1:exon

position:213554:-1
position: 213554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213671:-1
position: 213671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:212370-212438:-1:exon

position:212370:-1
position: 212370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212438:-1
position: 212438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:209360-209500:-1:exon

position:209360:-1
position: 209360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209500:-1
position: 209500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:206268-206384:-1:exon

position:206268:-1
position: 206268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206384:-1
position: 206384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:204281-204392:-1:exon

position:204281:-1
position: 204281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204392:-1
position: 204392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:201627-201698:-1:exon

position:201627:-1
position: 201627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201698:-1
position: 201698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:200002-200203:-1:exon

position:200002:-1
position: 200002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200203:-1
position: 200203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:197596-197683:-1:exon

position:197596:-1
position: 197596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197683:-1
position: 197683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:190948-191065:-1:exon

position:190948:-1
position: 190948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191065:-1
position: 191065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:187766-187985:-1:exon

position:187766:-1
position: 187766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187985:-1
position: 187985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:186387-186474:-1:exon

position:186387:-1
position: 186387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186474:-1
position: 186474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:185342-185425:-1:exon

position:185342:-1
position: 185342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185425:-1
position: 185425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:185074-185219:-1:exon

position:185074:-1
position: 185074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185219:-1
position: 185219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:184857-184939:-1:exon

position:184857:-1
position: 184857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184939:-1
position: 184939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:182787-182869:-1:exon

position:182787:-1
position: 182787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182869:-1
position: 182869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:182484-182575:-1:exon

position:182484:-1
position: 182484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182575:-1
position: 182575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:178375-179904:-1:exon

position:179904:-1
position: 179904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ANKRD52
product: ankyrin repeat domain 52, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032093989.1
SIO_010081: ANKRD52
subclass of: SO_0000673
so part of: ANKRD52
location: complement(join(178375..179904,182484..182575,182787..182869,184857..184939,185074..185219,185342..185425,186387..186474,187766..187985,190948..191065,197596..197683,200002..200203,201627..201698,204281..204392,209360..209500,212370..212438,213554..213671,214888..214970,215413..215527,217018..217096,217189..217401,218121..218263,219133..219220,219664..219864,221487..221557,222173..222251,224606..224689,229782..229899))
location: region:178375-229899:-1
so has part: feature:229782-229899:-1:exon
so has part: feature:224606-224689:-1:exon
so has part: feature:222173-222251:-1:exon
so has part: feature:221487-221557:-1:exon
so has part: feature:219664-219864:-1:exon
so has part: feature:219133-219220:-1:exon
so has part: feature:218121-218263:-1:exon
so has part: feature:217189-217401:-1:exon
so has part: feature:217018-217096:-1:exon
so has part: feature:215413-215527:-1:exon
so has part: feature:214888-214970:-1:exon
so has part: feature:213554-213671:-1:exon
so has part: feature:212370-212438:-1:exon
so has part: feature:209360-209500:-1:exon
so has part: feature:204281-204392:-1:exon
so has part: feature:201627-201698:-1:exon
so has part: feature:200002-200203:-1:exon
so has part: feature:197596-197683:-1:exon
so has part: feature:190948-191065:-1:exon
so has part: feature:187766-187985:-1:exon
so has part: feature:186387-186474:-1:exon
so has part: feature:185342-185425:-1:exon
so has part: feature:185074-185219:-1:exon
so has part: feature:184857-184939:-1:exon
so has part: feature:182787-182869:-1:exon
so has part: feature:182484-182575:-1:exon
so has part: feature:178375-179904:-1:exon

position:229899:-1
position: 229899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229782-229899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224606-224689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222173-222251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221487-221557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219664-219864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219133-219220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218121-218263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217189-217401:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217018-217096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215413-215527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214888-214970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:213554-213671:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212370-212438:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:209360-209500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204281-204392:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201627-201698:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:200002-200203:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:197596-197683:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:190948-191065:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:187766-187985:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:186387-186474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:185342-185425:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:185074-185219:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:184857-184939:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:182787-182869:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:182484-182575:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:178375-179904:-1:exon

ANKRD52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ANKRD52
product: ankyrin repeat domain 52, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_032093988.1
SIO_010081: ANKRD52
subclass of: SO_0000673
so part of: ANKRD52
location: complement(join(178375..179904,182484..182575,182787..182869,184857..184939,185074..185219,185342..185425,186387..186474,187766..187985,190948..191065,197596..197683,200002..200203,201627..201698,204281..204392,206268..206345,209360..209500,212370..212438,213554..213671,214888..214970,215413..215527,217018..217096,217189..217401,218121..218263,219133..219220,219664..219864,221487..221557,222173..222251,224606..224689,229782..229899))
location: region:178375-229899:-1
so has part: feature:229782-229899:-1:exon
so has part: feature:224606-224689:-1:exon
so has part: feature:222173-222251:-1:exon
so has part: feature:221487-221557:-1:exon
so has part: feature:219664-219864:-1:exon
so has part: feature:219133-219220:-1:exon
so has part: feature:218121-218263:-1:exon
so has part: feature:217189-217401:-1:exon
so has part: feature:217018-217096:-1:exon
so has part: feature:215413-215527:-1:exon
so has part: feature:214888-214970:-1:exon
so has part: feature:213554-213671:-1:exon
so has part: feature:212370-212438:-1:exon
so has part: feature:209360-209500:-1:exon
so has part: feature:206268-206345:-1:exon
so has part: feature:204281-204392:-1:exon
so has part: feature:201627-201698:-1:exon
so has part: feature:200002-200203:-1:exon
so has part: feature:197596-197683:-1:exon
so has part: feature:190948-191065:-1:exon
so has part: feature:187766-187985:-1:exon
so has part: feature:186387-186474:-1:exon
so has part: feature:185342-185425:-1:exon
so has part: feature:185074-185219:-1:exon
so has part: feature:184857-184939:-1:exon
so has part: feature:182787-182869:-1:exon
so has part: feature:182484-182575:-1:exon
so has part: feature:178375-179904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229782-229899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224606-224689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222173-222251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221487-221557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219664-219864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219133-219220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218121-218263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217189-217401:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217018-217096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215413-215527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214888-214970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:213554-213671:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212370-212438:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:209360-209500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206268-206345:-1:exon

position:206345:-1
position: 206345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:204281-204392:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201627-201698:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:200002-200203:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:197596-197683:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:190948-191065:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:187766-187985:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:186387-186474:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:185342-185425:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:185074-185219:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:184857-184939:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:182787-182869:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:182484-182575:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:178375-179904:-1:exon

ANKRD52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ANKRD52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X3
translation: MGVLSITDQPPLVQAIFNRDVEEVRSLLNQKENINVLDQERRTPLHAAAYIGDVAILELLILSGANVNAKDTVWLTPLHRAAASRHEKALHLLLKHSADVNARDKHWQTPLHVAAANRATKCVEALVPLLSTVNVADRTGRTALHHAVHSGHLEMVNLLLNKGASPSTCDKKDRQPLHWAAFLGHLEVLKLLVARGANVMCKDKKGYTLLHTAAASGQIEVVRHLLRLGVEIDEPNSFGNTALHIACYMGQDAVANELVNVGANVNQPNEKGFTPLHFAAVSTNGALCLEILVNNGADVNFQSKEGKSPLHMAAIHGRFTRSQILIQNGSEIDCADKYGNTPLHVAARYGHELLISTLMTNGADTARRGIHDMFPLHLAVLFGFSDCCRKLLSSGQLYSIVSSLSNEHVLSAGFDINTPDNLGRTCLHAAASGGNVECLNLLLSSGADLRRRDKFGRTPLHYAAANGSYQCTVTLVTAGASACEADGKGCTPLHYAAASDTYRSCLEFLLDNGADPSLRDRQGYTAVHYAAAYGNRQNLELLLEMSFNCLEDVESSVPVSPLHLAAYNGHCEALKALAETLVNLDVRDHRGRTALYLATERGSTECVQVLTSHGASALLKERKRKWTPLHAAAANGNTDSLHLLIDSGERADITDVMDIHGQTPLMLAIMNGHVDCVHLLLEKGSTADAADKRGRTALHRGAVTGCEDCLAALLDHDAFVLCRDFKGRTPIHFASACGHLEVLRTLLQAALSTDPLDSVVDYSGYSPMHWASYSGHEDCLELLLEHNPFAYLEGNPFTPLHCAVINNQDGTAEMLVEALGAKIVNSRDAKGRTPLHAAAFADNVHGLQLLLRHQAEVDTADKLGRTPLMVASENGHTAAVEFLLFQAKANITVLDVNKNTALHLACSKGHEKCALLILGETQDLGLINASNSALQMPLHIAARNGLASVVQALLSRGATVLAVDEEGHTPALACAPNKDVADCLALILSTMKPFPPKDAIGSFSFNLLKNCGIAAKTAAACGALPNGSACPYSKERHNAIGLDGCYSE
SIO_010081: ANKRD52
subclass of: SO_0000673
so part of: ANKRD52
location: complement(join(179657..179904,182484..182575,182787..182869,184857..184939,185074..185219,185342..185425,186387..186474,187766..187985,190948..191065,197596..197683,200002..200203,201627..201698,204281..204392,209360..209500,212370..212438,213554..213671,214888..214970,215413..215527,217018..217096,217189..217401,218121..218263,219133..219220,219664..219864,221487..221557,222173..222251,224606..224689,229782..229808))
location: region:179657-229808:-1
so has part: feature:229782-229808:-1:exon
so has part: feature:224606-224689:-1:exon
so has part: feature:222173-222251:-1:exon
so has part: feature:221487-221557:-1:exon
so has part: feature:219664-219864:-1:exon
so has part: feature:219133-219220:-1:exon
so has part: feature:218121-218263:-1:exon
so has part: feature:217189-217401:-1:exon
so has part: feature:217018-217096:-1:exon
so has part: feature:215413-215527:-1:exon
so has part: feature:214888-214970:-1:exon
so has part: feature:213554-213671:-1:exon
so has part: feature:212370-212438:-1:exon
so has part: feature:209360-209500:-1:exon
so has part: feature:204281-204392:-1:exon
so has part: feature:201627-201698:-1:exon
so has part: feature:200002-200203:-1:exon
so has part: feature:197596-197683:-1:exon
so has part: feature:190948-191065:-1:exon
so has part: feature:187766-187985:-1:exon
so has part: feature:186387-186474:-1:exon
so has part: feature:185342-185425:-1:exon
so has part: feature:185074-185219:-1:exon
so has part: feature:184857-184939:-1:exon
so has part: feature:182787-182869:-1:exon
so has part: feature:182484-182575:-1:exon
so has part: feature:179657-179904:-1:exon

XP_031949880.1
type: Protein
SIO_000068: ncbiprotein

position:179657:-1
position: 179657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229808:-1
position: 229808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229782-229808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224606-224689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222173-222251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221487-221557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219664-219864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219133-219220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218121-218263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217189-217401:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217018-217096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215413-215527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214888-214970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:213554-213671:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212370-212438:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:209360-209500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204281-204392:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201627-201698:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:200002-200203:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:197596-197683:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:190948-191065:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:187766-187985:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:186387-186474:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:185342-185425:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:185074-185219:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:184857-184939:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:182787-182869:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:182484-182575:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:179657-179904:-1:exon

ANKRD52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ANKRD52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X2
translation: MGVLSITDQPPLVQAIFNRDVEEVRSLLNQKENINVLDQERRTPLHAAAYIGDVAILELLILSGANVNAKDTVWLTPLHRAAASRHEKALHLLLKHSADVNARDKHWQTPLHVAAANRATKCVEALVPLLSTVNVADRTGRTALHHAVHSGHLEMVNLLLNKGASPSTCDKKDRQPLHWAAFLGHLEVLKLLVARGANVMCKDKKGYTLLHTAAASGQIEVVRHLLRLGVEIDEPNSFGNTALHIACYMGQDAVANELVNVGANVNQPNEKGFTPLHFAAVSTNGALCLEILVNNGADVNFQSKEGKSPLHMAAIHGRFTRSQILIQNGSEIDCADKYGNTPLHVAARYGHELLISTLMTNGADTARRGIHDMFPLHLAVLFGFSDCCRKLLSSGQLYSIVSSLSNEHVLSAGFDINTPDNLGRTCLHAAASGGNVECLNLLLSSGADLRRRDKFGRTPLHYAAANGSYQCTVTLVTAGASACEADGKGCTPLHYAAASDTYRRAEAPAGSGHGSAEEPLRESRRKEAFFCLEFLLDNGADPSLRDRQGYTAVHYAAAYGNRQNLELLLEMSFNCLEDVESSVPVSPLHLAAYNGHCEALKALAETLVNLDVRDHRGRTALYLATERGSTECVQVLTSHGASALLKERKRKWTPLHAAAANGNTDSLHLLIDSGERADITDVMDIHGQTPLMLAIMNGHVDCVHLLLEKGSTADAADKRGRTALHRGAVTGCEDCLAALLDHDAFVLCRDFKGRTPIHFASACGHLEVLRTLLQAALSTDPLDSVVDYSGYSPMHWASYSGHEDCLELLLEHNPFAYLEGNPFTPLHCAVINNQDGTAEMLVEALGAKIVNSRDAKGRTPLHAAAFADNVHGLQLLLRHQAEVDTADKLGRTPLMVASENGHTAAVEFLLFQAKANITVLDVNKNTALHLACSKGHEKCALLILGETQDLGLINASNSALQMPLHIAARNGLASVVQALLSRGATVLAVDEEGHTPALACAPNKDVADCLALILSTMKPFPPKDAIGSFSFNLLKNCGIAAKTAAACGALPNGSACPYSKERHNAIGLDGCYSE
SIO_010081: ANKRD52
subclass of: SO_0000673
so part of: ANKRD52
location: complement(join(179657..179904,182484..182575,182787..182869,184857..184939,185074..185219,185342..185425,186387..186474,187766..187985,190948..191065,197596..197683,200002..200203,201627..201698,204281..204392,206268..206345,209360..209500,212370..212438,213554..213671,214888..214970,215413..215527,217018..217096,217189..217401,218121..218263,219133..219220,219664..219864,221487..221557,222173..222251,224606..224689,229782..229808))
location: region:179657-229808:-1
so has part: feature:229782-229808:-1:exon
so has part: feature:224606-224689:-1:exon
so has part: feature:222173-222251:-1:exon
so has part: feature:221487-221557:-1:exon
so has part: feature:219664-219864:-1:exon
so has part: feature:219133-219220:-1:exon
so has part: feature:218121-218263:-1:exon
so has part: feature:217189-217401:-1:exon
so has part: feature:217018-217096:-1:exon
so has part: feature:215413-215527:-1:exon
so has part: feature:214888-214970:-1:exon
so has part: feature:213554-213671:-1:exon
so has part: feature:212370-212438:-1:exon
so has part: feature:209360-209500:-1:exon
so has part: feature:206268-206345:-1:exon
so has part: feature:204281-204392:-1:exon
so has part: feature:201627-201698:-1:exon
so has part: feature:200002-200203:-1:exon
so has part: feature:197596-197683:-1:exon
so has part: feature:190948-191065:-1:exon
so has part: feature:187766-187985:-1:exon
so has part: feature:186387-186474:-1:exon
so has part: feature:185342-185425:-1:exon
so has part: feature:185074-185219:-1:exon
so has part: feature:184857-184939:-1:exon
so has part: feature:182787-182869:-1:exon
so has part: feature:182484-182575:-1:exon
so has part: feature:179657-179904:-1:exon

XP_031949879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229782-229808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224606-224689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222173-222251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221487-221557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219664-219864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219133-219220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218121-218263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217189-217401:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217018-217096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215413-215527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214888-214970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:213554-213671:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212370-212438:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:209360-209500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206268-206345:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204281-204392:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201627-201698:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:200002-200203:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:197596-197683:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:190948-191065:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:187766-187985:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:186387-186474:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:185342-185425:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:185074-185219:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:184857-184939:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:182787-182869:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:182484-182575:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:179657-179904:-1:exon

ANKRD52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ANKRD52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X1
translation: MGVLSITDQPPLVQAIFNRDVEEVRSLLNQKENINVLDQERRTPLHAAAYIGDVAILELLILSGANVNAKDTVWLTPLHRAAASRHEKALHLLLKHSADVNARDKHWQTPLHVAAANRATKCVEALVPLLSTVNVADRTGRTALHHAVHSGHLEMVNLLLNKGASPSTCDKKDRQPLHWAAFLGHLEVLKLLVARGANVMCKDKKGYTLLHTAAASGQIEVVRHLLRLGVEIDEPNSFGNTALHIACYMGQDAVANELVNVGANVNQPNEKGFTPLHFAAVSTNGALCLEILVNNGADVNFQSKEGKSPLHMAAIHGRFTRSQILIQNGSEIDCADKYGNTPLHVAARYGHELLISTLMTNGADTARRGIHDMFPLHLAVLFGFSDCCRKLLSSGQLYSIVSSLSNEHVLSAGFDINTPDNLGRTCLHAAASGGNVECLNLLLSSGADLRRRDKFGRTPLHYAAANGSYQCTVTLVTAGASACEADGKGCTPLHYAAASDTYRRAPCPAQVPPVPPRAEAPAGSGHGSAEEPLRESRRKEAFFCLEFLLDNGADPSLRDRQGYTAVHYAAAYGNRQNLELLLEMSFNCLEDVESSVPVSPLHLAAYNGHCEALKALAETLVNLDVRDHRGRTALYLATERGSTECVQVLTSHGASALLKERKRKWTPLHAAAANGNTDSLHLLIDSGERADITDVMDIHGQTPLMLAIMNGHVDCVHLLLEKGSTADAADKRGRTALHRGAVTGCEDCLAALLDHDAFVLCRDFKGRTPIHFASACGHLEVLRTLLQAALSTDPLDSVVDYSGYSPMHWASYSGHEDCLELLLEHNPFAYLEGNPFTPLHCAVINNQDGTAEMLVEALGAKIVNSRDAKGRTPLHAAAFADNVHGLQLLLRHQAEVDTADKLGRTPLMVASENGHTAAVEFLLFQAKANITVLDVNKNTALHLACSKGHEKCALLILGETQDLGLINASNSALQMPLHIAARNGLASVVQALLSRGATVLAVDEEGHTPALACAPNKDVADCLALILSTMKPFPPKDAIGSFSFNLLKNCGIAAKTAAACGALPNGSACPYSKERHNAIGLDGCYSE
SIO_010081: ANKRD52
subclass of: SO_0000673
so part of: ANKRD52
location: complement(join(179657..179904,182484..182575,182787..182869,184857..184939,185074..185219,185342..185425,186387..186474,187766..187985,190948..191065,197596..197683,200002..200203,201627..201698,204281..204392,206268..206384,209360..209500,212370..212438,213554..213671,214888..214970,215413..215527,217018..217096,217189..217401,218121..218263,219133..219220,219664..219864,221487..221557,222173..222251,224606..224689,229782..229808))
location: region:179657-229808:-1
so has part: feature:229782-229808:-1:exon
so has part: feature:224606-224689:-1:exon
so has part: feature:222173-222251:-1:exon
so has part: feature:221487-221557:-1:exon
so has part: feature:219664-219864:-1:exon
so has part: feature:219133-219220:-1:exon
so has part: feature:218121-218263:-1:exon
so has part: feature:217189-217401:-1:exon
so has part: feature:217018-217096:-1:exon
so has part: feature:215413-215527:-1:exon
so has part: feature:214888-214970:-1:exon
so has part: feature:213554-213671:-1:exon
so has part: feature:212370-212438:-1:exon
so has part: feature:209360-209500:-1:exon
so has part: feature:206268-206384:-1:exon
so has part: feature:204281-204392:-1:exon
so has part: feature:201627-201698:-1:exon
so has part: feature:200002-200203:-1:exon
so has part: feature:197596-197683:-1:exon
so has part: feature:190948-191065:-1:exon
so has part: feature:187766-187985:-1:exon
so has part: feature:186387-186474:-1:exon
so has part: feature:185342-185425:-1:exon
so has part: feature:185074-185219:-1:exon
so has part: feature:184857-184939:-1:exon
so has part: feature:182787-182869:-1:exon
so has part: feature:182484-182575:-1:exon
so has part: feature:179657-179904:-1:exon

XP_031949878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229782-229808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224606-224689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222173-222251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221487-221557:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219664-219864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:219133-219220:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218121-218263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217189-217401:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217018-217096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215413-215527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214888-214970:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:213554-213671:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212370-212438:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:209360-209500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:206268-206384:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:204281-204392:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201627-201698:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:200002-200203:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:197596-197683:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:190948-191065:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:187766-187985:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:186387-186474:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:185342-185425:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:185074-185219:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:184857-184939:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:182787-182869:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:182484-182575:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:179657-179904:-1:exon

LOC116436702
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(227025..229579)
location: region:227025-229579:-1
so has part: feature:227025-229579:-1:exon
subclass of: SO_0000010

116436702
type: Gene
SIO_000068: ncbigene

position:227025:-1
position: 227025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229579:-1
position: 229579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227025-229579:-1:exon

LOC116436702
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436702
product: uncharacterized LOC116436702
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032093991.1
SIO_010081: LOC116436702
subclass of: SO_0000673
so part of: LOC116436702
location: complement(join(227025..228303,228335..229579))
location: region:227025-229579:-1
so has part: feature:228335-229579:-1:exon
so has part: feature:227025-228303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228335-229579:-1:exon

position:228335:-1
position: 228335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227025-228303:-1:exon

position:228303:-1
position: 228303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436702
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC116436702
translation: MGESREWENPGNETSWIKEFGASRGDPSPKTPGMGPRPRCASFCLAWILRGTSGLQGGLVGVLGTPLGFGVFSMRFWGHLWGAGCPHQVLGVPVVCSMSPWGFGTPSGCSVSPLSFGGAPRVRGGPHRVLGMLLGCGVSLSCFGGTSGSQGVPFRFWGYSWGAGSPCWVLGTLLGCRVFLSCFGDVSGVAGCPHWVLGMFLGCREPLLGFGDPPGVQSVPVMFWGCFWGCRVSPSCFRDTFGVQGVPIRIWGCSWVPGYPCYVSGTFLGCRVSSSGFGDPSGVLGVTVRFWGLSWGSECPCHVLGMFLGFRVSPSGFGDTLGVQSVPVMFWGFSGVQSVPIGFWGHSWGAECPCHVLGMFLGCRVSPSGFGDVSGVQSVPTGRAVPSAEP
SIO_010081: LOC116436702
subclass of: SO_0000673
so part of: LOC116436702
location: complement(join(227544..228303,228335..228747))
location: region:227544-228747:-1
so has part: feature:228335-228747:-1:exon
so has part: feature:227544-228303:-1:exon

XP_031949882.1
type: Protein
SIO_000068: ncbiprotein

position:227544:-1
position: 227544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228747:-1
position: 228747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228335-228747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227544-228303:-1:exon

COQ10A
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: COQ10A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 231285..235520
location: region:231285-235520:1
so has part: feature:231285-235520:1:exon
subclass of: SO_0000010

116436703
type: Gene
SIO_000068: ncbigene

position:231285:1
position: 231285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235520:1
position: 235520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231285-235520:1:exon

COQ10A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: COQ10A
product: coenzyme Q10A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_032093992.1
SIO_010081: COQ10A
subclass of: SO_0000673
so part of: COQ10A
location: join(231285..231379,232880..232999,234008..234200,234687..234788,234886..235520)
location: region:231285-235520:1
so has part: feature:231285-231379:1:exon
so has part: feature:232880-232999:1:exon
so has part: feature:234008-234200:1:exon
so has part: feature:234687-234788:1:exon
so has part: feature:234886-235520:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231285-231379:1:exon

position:231379:1
position: 231379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232880-232999:1:exon

position:232880:1
position: 232880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232999:1
position: 232999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234008-234200:1:exon

position:234008:1
position: 234008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234200:1
position: 234200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234687-234788:1:exon

position:234687:1
position: 234687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234788:1
position: 234788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:234886-235520:1:exon

position:234886:1
position: 234886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COQ10A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: COQ10A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coenzyme Q-binding protein COQ10 homolog A, mitochondrial
translation: MAARRLRGALQLGARQRLRAAAAPPGRHTALCGLRLAVAWEPRAQPSRSFLNLTNKRKEYSERRIIGYSMQEMYDVVANVEDYKNFVPWCKKSVVVSRRSGHVKAQLEVGFPPVLERYTSIVTLVRPHLVKAVCTDGRLFNHLETNWRFSPGIPGYPRTSTVDFSISFEFRSLLHSQLATMFFDEVVKQMVAAFERRAAKNFGPETRIPRELMFHEVHQT
SIO_010081: COQ10A
subclass of: SO_0000673
so part of: COQ10A
location: join(231300..231379,232880..232999,234008..234200,234687..234788,234886..235053)
location: region:231300-235053:1
so has part: feature:231300-231379:1:exon
so has part: feature:232880-232999:1:exon
so has part: feature:234008-234200:1:exon
so has part: feature:234687-234788:1:exon
so has part: feature:234886-235053:1:exon

XP_031949883.1
type: Protein
SIO_000068: ncbiprotein

position:231300:1
position: 231300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235053:1
position: 235053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231300-231379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232880-232999:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234008-234200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234687-234788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234886-235053:1:exon

CS
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: CS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(236695..243116)
location: region:236695-243116:-1
so has part: feature:236695-243116:-1:exon
subclass of: SO_0000010

116436701
type: Gene
SIO_000068: ncbigene

position:236695:-1
position: 236695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243116:-1
position: 243116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236695-243116:-1:exon

CS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CS
product: citrate synthase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093990.1
SIO_010081: CS
subclass of: SO_0000673
so part of: CS
location: complement(join(236695..236870,237588..237797,238552..238653,239239..239368,239589..239788,239886..240074,240159..240290,240369..240434,240517..240624,241079..241126,242966..243116))
location: region:236695-243116:-1
so has part: feature:242966-243116:-1:exon
so has part: feature:241079-241126:-1:exon
so has part: feature:240517-240624:-1:exon
so has part: feature:240369-240434:-1:exon
so has part: feature:240159-240290:-1:exon
so has part: feature:239886-240074:-1:exon
so has part: feature:239589-239788:-1:exon
so has part: feature:239239-239368:-1:exon
so has part: feature:238552-238653:-1:exon
so has part: feature:237588-237797:-1:exon
so has part: feature:236695-236870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242966-243116:-1:exon

position:242966:-1
position: 242966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241079-241126:-1:exon

position:241079:-1
position: 241079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241126:-1
position: 241126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240517-240624:-1:exon

position:240517:-1
position: 240517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240624:-1
position: 240624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240369-240434:-1:exon

position:240369:-1
position: 240369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240434:-1
position: 240434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240159-240290:-1:exon

position:240159:-1
position: 240159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240290:-1
position: 240290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:239886-240074:-1:exon

position:239886:-1
position: 239886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240074:-1
position: 240074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:239589-239788:-1:exon

position:239589:-1
position: 239589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239788:-1
position: 239788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:239239-239368:-1:exon

position:239239:-1
position: 239239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239368:-1
position: 239368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:238552-238653:-1:exon

position:238552:-1
position: 238552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238653:-1
position: 238653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:237588-237797:-1:exon

position:237588:-1
position: 237588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237797:-1
position: 237797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:236695-236870:-1:exon

position:236870:-1
position: 236870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: citrate synthase, mitochondrial
translation: MTLLAAGSRAAARLRGPKNAPCVLFAARHASTTTNLKDVLATMIPKEQAKIKSFRQQHGSTAIGQITVDMVYGGMRGMKGLIYETSVLDPDEGIRFRGYSIPECQKKLPKAAGGEEPLPEGLFWLLVTGEIPTQEQVTWLSREWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSESKFARAYAQGIHRAKYWEFVYEDAMDLIAKLPCVAAKIYRNLYREGSGIGAIDPNLDWSHNFTNMLGYTDPQFIELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLAFAAAMNGLAGPLHGLANQEVLLWLTDLQKELGQDVSDEKLRDFIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPKDPLFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMKEMNYYTVLFGVSRALGVLSQLIWSRALGFPLERPKSMSTKGLMQLVGYKSG
SIO_010081: CS
subclass of: SO_0000673
so part of: CS
location: complement(join(236700..236870,237588..237797,238552..238653,239239..239368,239589..239788,239886..240074,240159..240290,240369..240434,240517..240624,241079..241126,242966..243019))
location: region:236700-243019:-1
so has part: feature:242966-243019:-1:exon
so has part: feature:241079-241126:-1:exon
so has part: feature:240517-240624:-1:exon
so has part: feature:240369-240434:-1:exon
so has part: feature:240159-240290:-1:exon
so has part: feature:239886-240074:-1:exon
so has part: feature:239589-239788:-1:exon
so has part: feature:239239-239368:-1:exon
so has part: feature:238552-238653:-1:exon
so has part: feature:237588-237797:-1:exon
so has part: feature:236700-236870:-1:exon

XP_031949881.1
type: Protein
SIO_000068: ncbiprotein

position:236700:-1
position: 236700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243019:-1
position: 243019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242966-243019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241079-241126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240517-240624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240369-240434:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240159-240290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:239886-240074:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:239589-239788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:239239-239368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:238552-238653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237588-237797:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:236700-236870:-1:exon

CNPY2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: CNPY2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(244106..249136)
location: region:244106-249136:-1
so has part: feature:244106-249136:-1:exon
subclass of: SO_0000010

116436807
type: Gene
SIO_000068: ncbigene

position:244106:-1
position: 244106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249136:-1
position: 249136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244106-249136:-1:exon

CNPY2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CNPY2
product: canopy FGF signaling regulator 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032094201.1
SIO_010081: CNPY2
subclass of: SO_0000673
so part of: CNPY2
location: complement(join(244106..244488,246498..246594,246683..246880,246956..247071,247517..247675,248368..249136))
location: region:244106-249136:-1
so has part: feature:248368-249136:-1:exon
so has part: feature:247517-247675:-1:exon
so has part: feature:246956-247071:-1:exon
so has part: feature:246683-246880:-1:exon
so has part: feature:246498-246594:-1:exon
so has part: feature:244106-244488:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248368-249136:-1:exon

position:248368:-1
position: 248368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247517-247675:-1:exon

position:247517:-1
position: 247517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247675:-1
position: 247675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246956-247071:-1:exon

position:246956:-1
position: 246956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247071:-1
position: 247071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:246683-246880:-1:exon

position:246683:-1
position: 246683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246880:-1
position: 246880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:246498-246594:-1:exon

position:246498:-1
position: 246498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246594:-1
position: 246594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244106-244488:-1:exon

position:244488:-1
position: 244488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNPY2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CNPY2
product: canopy FGF signaling regulator 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_032094203.1
SIO_010081: CNPY2
subclass of: SO_0000673
so part of: CNPY2
location: complement(join(244106..244488,246498..246594,246683..246880,246956..247071,247517..247675,248196..248243))
location: region:244106-248243:-1
so has part: feature:248196-248243:-1:exon
so has part: feature:247517-247675:-1:exon
so has part: feature:246956-247071:-1:exon
so has part: feature:246683-246880:-1:exon
so has part: feature:246498-246594:-1:exon
so has part: feature:244106-244488:-1:exon

position:248243:-1
position: 248243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248196-248243:-1:exon

position:248196:-1
position: 248196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247517-247675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246956-247071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246683-246880:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246498-246594:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244106-244488:-1:exon

CNPY2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CNPY2
product: canopy FGF signaling regulator 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XM_032094202.1
SIO_010081: CNPY2
subclass of: SO_0000673
so part of: CNPY2
location: complement(join(244106..244488,246498..246594,246683..246880,246956..247071,247517..247675,248154..248228))
location: region:244106-248228:-1
so has part: feature:248154-248228:-1:exon
so has part: feature:247517-247675:-1:exon
so has part: feature:246956-247071:-1:exon
so has part: feature:246683-246880:-1:exon
so has part: feature:246498-246594:-1:exon
so has part: feature:244106-244488:-1:exon

position:248228:-1
position: 248228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248154-248228:-1:exon

position:248154:-1
position: 248154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247517-247675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246956-247071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246683-246880:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246498-246594:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244106-244488:-1:exon

CNPY2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CNPY2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein canopy homolog 2 isoform X1
translation: MTGTGAGSRDTVQRSRAGTGDTAALTGPGLGTGPAPGHGRTDQGPGRCSDRRHGGTDQDLGSDRGTAGQSRTRSRSGAQSGGTAGRTRTRSRSGAQSGGTAGRTRTRSRSGAQSGGTAGRTRTRSRSGAQSGGTAGRTRTRSRSGAQSGGTAGRTRTRSRSGAQSGGTAGRTRTRSRSGAQSGGTAGRTRTRSRSRPRDAAEAGRGRGQADPVGGVTPGPAHAGPSATRPGPGNGGAFGARLGLPPALPAHGDSGALRMRGGIPGICGALRMRGRVPALLGLALALASLLPTAGARRSQDLHCGACRALVDELEWEIAQVDPRKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLERVCEKMKEYGEKVDPATHRKSYVRVISHDGTKMDLSGVKFDGDVTSSLKFACESIAEEYEDELIEFLSHEAENVKDRLCSKRTDLCDHALHIPHDEL
SIO_010081: CNPY2
subclass of: SO_0000673
so part of: CNPY2
location: complement(join(244445..244488,246498..246594,246683..246880,246956..247071,247517..247675,248368..249121))
location: region:244445-249121:-1
so has part: feature:248368-249121:-1:exon
so has part: feature:247517-247675:-1:exon
so has part: feature:246956-247071:-1:exon
so has part: feature:246683-246880:-1:exon
so has part: feature:246498-246594:-1:exon
so has part: feature:244445-244488:-1:exon

XP_031950092.1
type: Protein
SIO_000068: ncbiprotein

position:244445:-1
position: 244445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249121:-1
position: 249121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248368-249121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247517-247675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246956-247071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246683-246880:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246498-246594:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244445-244488:-1:exon

CNPY2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CNPY2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein canopy homolog 2 isoform X2
translation: MRGGIPGICGALRMRGRVPALLGLALALASLLPTAGARRSQDLHCGACRALVDELEWEIAQVDPRKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLERVCEKMKEYGEKVDPATHRKSYVRVISHDGTKMDLSGVKFDGDVTSSLKFACESIAEEYEDELIEFLSHEAENVKDRLCSKRTDLCDHALHIPHDEL
SIO_010081: CNPY2
subclass of: SO_0000673
so part of: CNPY2
location: complement(join(244445..244488,246498..246594,246683..246880,246956..247071,247517..247655))
location: region:244445-247655:-1
so has part: feature:247517-247655:-1:exon
so has part: feature:246956-247071:-1:exon
so has part: feature:246683-246880:-1:exon
so has part: feature:246498-246594:-1:exon
so has part: feature:244445-244488:-1:exon

XP_031950093.1
type: Protein
SIO_000068: ncbiprotein

position:247655:-1
position: 247655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247517-247655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:246956-247071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246683-246880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246498-246594:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244445-244488:-1:exon

CNPY2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CNPY2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein canopy homolog 2 isoform X2
translation: MRGGIPGICGALRMRGRVPALLGLALALASLLPTAGARRSQDLHCGACRALVDELEWEIAQVDPRKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLERVCEKMKEYGEKVDPATHRKSYVRVISHDGTKMDLSGVKFDGDVTSSLKFACESIAEEYEDELIEFLSHEAENVKDRLCSKRTDLCDHALHIPHDEL
SIO_010081: CNPY2
subclass of: SO_0000673
so part of: CNPY2
location: complement(join(244445..244488,246498..246594,246683..246880,246956..247071,247517..247655))
location: region:244445-247655:-1
so has part: feature:247517-247655:-1:exon
so has part: feature:246956-247071:-1:exon
so has part: feature:246683-246880:-1:exon
so has part: feature:246498-246594:-1:exon
so has part: feature:244445-244488:-1:exon

XP_031950094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247517-247655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:246956-247071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246683-246880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:246498-246594:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244445-244488:-1:exon

PAN2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(249388..262190)
location: region:249388-262190:-1
so has part: feature:249388-262190:-1:exon
subclass of: SO_0000010

116436808
type: Gene
SIO_000068: ncbigene

position:249388:-1
position: 249388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262190:-1
position: 262190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249388-262190:-1:exon

PAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PAN2
product: poly(A) specific ribonuclease subunit PAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094204.1
SIO_010081: PAN2
subclass of: SO_0000673
so part of: PAN2
location: complement(join(249388..249623,250153..250350,250454..250547,250663..250842,252040..252183,252280..252437,252517..252607,252687..252746,253347..253484,253667..253808,254311..254387,254802..254900,255206..255312,255573..255715,256080..256279,256697..256825,256915..257034,257127..257246,257737..257834,258281..258643,259425..259692,259775..259852,259939..260059,260143..260312,261121..261397,262096..262190))
location: region:249388-262190:-1
so has part: feature:262096-262190:-1:exon
so has part: feature:261121-261397:-1:exon
so has part: feature:260143-260312:-1:exon
so has part: feature:259939-260059:-1:exon
so has part: feature:259775-259852:-1:exon
so has part: feature:259425-259692:-1:exon
so has part: feature:258281-258643:-1:exon
so has part: feature:257737-257834:-1:exon
so has part: feature:257127-257246:-1:exon
so has part: feature:256915-257034:-1:exon
so has part: feature:256697-256825:-1:exon
so has part: feature:256080-256279:-1:exon
so has part: feature:255573-255715:-1:exon
so has part: feature:255206-255312:-1:exon
so has part: feature:254802-254900:-1:exon
so has part: feature:254311-254387:-1:exon
so has part: feature:253667-253808:-1:exon
so has part: feature:253347-253484:-1:exon
so has part: feature:252687-252746:-1:exon
so has part: feature:252517-252607:-1:exon
so has part: feature:252280-252437:-1:exon
so has part: feature:252040-252183:-1:exon
so has part: feature:250663-250842:-1:exon
so has part: feature:250454-250547:-1:exon
so has part: feature:250153-250350:-1:exon
so has part: feature:249388-249623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:262096-262190:-1:exon

position:262096:-1
position: 262096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261121-261397:-1:exon

position:261121:-1
position: 261121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261397:-1
position: 261397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260143-260312:-1:exon

position:260143:-1
position: 260143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260312:-1
position: 260312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:259939-260059:-1:exon

position:259939:-1
position: 259939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260059:-1
position: 260059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:259775-259852:-1:exon

position:259775:-1
position: 259775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259852:-1
position: 259852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:259425-259692:-1:exon

position:259425:-1
position: 259425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259692:-1
position: 259692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:258281-258643:-1:exon

position:258281:-1
position: 258281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258643:-1
position: 258643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:257737-257834:-1:exon

position:257737:-1
position: 257737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257834:-1
position: 257834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:257127-257246:-1:exon

position:257127:-1
position: 257127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257246:-1
position: 257246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:256915-257034:-1:exon

position:256915:-1
position: 256915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257034:-1
position: 257034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:256697-256825:-1:exon

position:256697:-1
position: 256697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256825:-1
position: 256825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:256080-256279:-1:exon

position:256080:-1
position: 256080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256279:-1
position: 256279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:255573-255715:-1:exon

position:255573:-1
position: 255573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255715:-1
position: 255715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:255206-255312:-1:exon

position:255206:-1
position: 255206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255312:-1
position: 255312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:254802-254900:-1:exon

position:254802:-1
position: 254802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254900:-1
position: 254900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:254311-254387:-1:exon

position:254311:-1
position: 254311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254387:-1
position: 254387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:253667-253808:-1:exon

position:253667:-1
position: 253667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253808:-1
position: 253808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:253347-253484:-1:exon

position:253347:-1
position: 253347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253484:-1
position: 253484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:252687-252746:-1:exon

position:252687:-1
position: 252687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252746:-1
position: 252746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:252517-252607:-1:exon

position:252517:-1
position: 252517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252607:-1
position: 252607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:252280-252437:-1:exon

position:252280:-1
position: 252280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252437:-1
position: 252437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:252040-252183:-1:exon

position:252040:-1
position: 252040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252183:-1
position: 252183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:250663-250842:-1:exon

position:250663:-1
position: 250663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250842:-1
position: 250842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:250454-250547:-1:exon

position:250454:-1
position: 250454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250547:-1
position: 250547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:250153-250350:-1:exon

position:250153:-1
position: 250153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250350:-1
position: 250350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:249388-249623:-1:exon

position:249623:-1
position: 249623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PAN2
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(258297..258299),aa:OTHER)
product: LOW QUALITY PROTEIN: PAN2-PAN3 deadenylation complex catalytic subunit PAN2
translation: MNFEGLNPSLAEYAPPLLDPVLDAHLTPSLVELDPEGVSLEGMTVPESVHLMEGMYSELHTAVSEVGVPVSVSHFDLHEEMLWVGNHGGHATSFFGPTLERYSSFQVNSSDDIRQIQSLENGVLFLTKTNLKYMSRGGLIIFDYLMDESEDMHSLLLTDNNTLLVAGLQNHVLEIDLNTVQETQKYTVEVPGITIMRQSNRFFFCGHTSGKVSLRDLRTFVVEHEFDAYSGSLSDFDVHGNLLVTCGFSSRMNGLACDRFLKVYDLRMMRATTPLQVHIDPFFLRFIPTYTSRLAIISQTGQCQFCEPTGLANPADIFHVNTVGPLIMTFDVSASKQALAFGDSEGCVHLWADSPEVTFNAYSRETDFALPCMVDTLPHLDWNQDLVPLSLIPVPLTSDALLSDWPAANSAPAPRXFPASPGEPPPVDPEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKEMDNEFDNFSQVPESPIGREEEPHLYRVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSDEATGKVNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGAGSSSFGSSGDSVIGQLFSCEMENCSMCRCGKETVRVSSTLLFTLSYPDSTEKPAKDYEFAQILKRSICLEQNTQAWCENCEKYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYSFQKAMMKRGGFDITKGKEISLGEWKDLGNPDTGHLYPSVEELKNIWIPHAIKMRLTKSKELDVSNWSETDELSPMDDPESVYIYDLMATVVHILDSRTGGSLVGHIKVGETYHQRKEGVTHQQWYLFNDFLIEPVDKCEAVQFDMSWKVPAILYYARRNLNAKYNLVIKNPIEASVLLAEASLARKQRKCHATFIPLMLSEMPQAGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFVGHGLQKDFRVINLMVPKDQVIDTVYLFHIPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTALQLYRKYLELSPQGSEPEEFRKVLKGLYEKGRKLDWKVPEPDSQSSPKHGAVFPPVLAL
SIO_010081: PAN2
subclass of: SO_0000673
so part of: PAN2
location: complement(join(249589..249623,250153..250350,250454..250547,250663..250842,252040..252183,252280..252437,252517..252607,252687..252746,253347..253484,253667..253808,254311..254387,254802..254900,255206..255312,255573..255715,256080..256279,256697..256825,256915..257034,257127..257246,257737..257834,258281..258643,259425..259692,259775..259852,259939..260059,260143..260312,261121..261384))
location: region:249589-261384:-1
so has part: feature:261121-261384:-1:exon
so has part: feature:260143-260312:-1:exon
so has part: feature:259939-260059:-1:exon
so has part: feature:259775-259852:-1:exon
so has part: feature:259425-259692:-1:exon
so has part: feature:258281-258643:-1:exon
so has part: feature:257737-257834:-1:exon
so has part: feature:257127-257246:-1:exon
so has part: feature:256915-257034:-1:exon
so has part: feature:256697-256825:-1:exon
so has part: feature:256080-256279:-1:exon
so has part: feature:255573-255715:-1:exon
so has part: feature:255206-255312:-1:exon
so has part: feature:254802-254900:-1:exon
so has part: feature:254311-254387:-1:exon
so has part: feature:253667-253808:-1:exon
so has part: feature:253347-253484:-1:exon
so has part: feature:252687-252746:-1:exon
so has part: feature:252517-252607:-1:exon
so has part: feature:252280-252437:-1:exon
so has part: feature:252040-252183:-1:exon
so has part: feature:250663-250842:-1:exon
so has part: feature:250454-250547:-1:exon
so has part: feature:250153-250350:-1:exon
so has part: feature:249589-249623:-1:exon

XP_031950095.1
type: Protein
SIO_000068: ncbiprotein

position:249589:-1
position: 249589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261384:-1
position: 261384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261121-261384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260143-260312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:259939-260059:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259775-259852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259425-259692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258281-258643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:257737-257834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:257127-257246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256915-257034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256697-256825:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256080-256279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:255573-255715:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255206-255312:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:254802-254900:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:254311-254387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:253667-253808:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:253347-253484:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:252687-252746:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:252517-252607:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:252280-252437:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:252040-252183:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:250663-250842:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:250454-250547:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:250153-250350:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:249589-249623:-1:exon

IL23A
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: IL23A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 263608..267165
location: region:263608-267165:1
so has part: feature:263608-267165:1:exon
subclass of: SO_0000010

116436831
type: Gene
SIO_000068: ncbigene

position:263608:1
position: 263608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267165:1
position: 267165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263608-267165:1:exon

IL23A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IL23A
product: interleukin 23 subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032094243.1
SIO_010081: IL23A
subclass of: SO_0000673
so part of: IL23A
location: join(263608..264273,264437..264535,265982..266107,266997..267165)
location: region:263608-267165:1
so has part: feature:263608-264273:1:exon
so has part: feature:264437-264535:1:exon
so has part: feature:265982-266107:1:exon
so has part: feature:266997-267165:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263608-264273:1:exon

position:264273:1
position: 264273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:264437-264535:1:exon

position:264437:1
position: 264437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264535:1
position: 264535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265982-266107:1:exon

position:265982:1
position: 265982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266107:1
position: 266107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266997-267165:1:exon

position:266997:1
position: 266997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL23A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IL23A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-23 subunit alpha
translation: MAPLRRLLLCLCLALLLPPPAAPAPTPAPGRRPDWAACRILSRELSRLLATVKEPHSALEGMQLMEEDPQNWPPRIRCSDSCDPLTLESNNTRCLHRIRQALQHYRDLLGSDIFREQPQPQLETTMEQLLRHVHEGPGRPPRPPPPAPTKVWAHPFQRHLALKRLRSFAAVIGRVFNHSAR
SIO_010081: IL23A
subclass of: SO_0000673
so part of: IL23A
location: join(264097..264273,264437..264535,265982..266107,266997..267140)
location: region:264097-267140:1
so has part: feature:264097-264273:1:exon
so has part: feature:264437-264535:1:exon
so has part: feature:265982-266107:1:exon
so has part: feature:266997-267140:1:exon

XP_031950134.1
type: Protein
SIO_000068: ncbiprotein

position:264097:1
position: 264097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267140:1
position: 267140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264097-264273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264437-264535:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265982-266107:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266997-267140:1:exon

STAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: STAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(267269..279004)
location: region:267269-279004:-1
so has part: feature:267269-279004:-1:exon
subclass of: SO_0000010

116436714
type: Gene
SIO_000068: ncbigene

position:267269:-1
position: 267269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279004:-1
position: 279004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267269-279004:-1:exon

STAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: STAT2
product: signal transducer and activator of transcription 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032094016.1
SIO_010081: STAT2
subclass of: SO_0000673
so part of: STAT2
location: complement(join(267269..267579,267750..268057,269961..270684,270745..270949,271050..271107,271193..271381,271468..271604,271674..271762,272470..272519,272613..272748,273493..273591,273681..273764,273841..273897,274020..274113,275073..275093,275172..275324,276729..276887,276960..277108,277221..277306,277383..277461,277542..277634,277706..277804,277904..278054,278138..278269,278378..278559,278910..279004))
location: region:267269-279004:-1
so has part: feature:278910-279004:-1:exon
so has part: feature:278378-278559:-1:exon
so has part: feature:278138-278269:-1:exon
so has part: feature:277904-278054:-1:exon
so has part: feature:277706-277804:-1:exon
so has part: feature:277542-277634:-1:exon
so has part: feature:277383-277461:-1:exon
so has part: feature:277221-277306:-1:exon
so has part: feature:276960-277108:-1:exon
so has part: feature:276729-276887:-1:exon
so has part: feature:275172-275324:-1:exon
so has part: feature:275073-275093:-1:exon
so has part: feature:274020-274113:-1:exon
so has part: feature:273841-273897:-1:exon
so has part: feature:273681-273764:-1:exon
so has part: feature:273493-273591:-1:exon
so has part: feature:272613-272748:-1:exon
so has part: feature:272470-272519:-1:exon
so has part: feature:271674-271762:-1:exon
so has part: feature:271468-271604:-1:exon
so has part: feature:271193-271381:-1:exon
so has part: feature:271050-271107:-1:exon
so has part: feature:270745-270949:-1:exon
so has part: feature:269961-270684:-1:exon
so has part: feature:267750-268057:-1:exon
so has part: feature:267269-267579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278910-279004:-1:exon

position:278910:-1
position: 278910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278378-278559:-1:exon

position:278378:-1
position: 278378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278559:-1
position: 278559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278138-278269:-1:exon

position:278138:-1
position: 278138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278269:-1
position: 278269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:277904-278054:-1:exon

position:277904:-1
position: 277904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278054:-1
position: 278054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277706-277804:-1:exon

position:277706:-1
position: 277706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277804:-1
position: 277804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:277542-277634:-1:exon

position:277542:-1
position: 277542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277634:-1
position: 277634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277383-277461:-1:exon

position:277383:-1
position: 277383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277461:-1
position: 277461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:277221-277306:-1:exon

position:277221:-1
position: 277221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277306:-1
position: 277306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:276960-277108:-1:exon

position:276960:-1
position: 276960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277108:-1
position: 277108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:276729-276887:-1:exon

position:276729:-1
position: 276729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276887:-1
position: 276887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:275172-275324:-1:exon

position:275172:-1
position: 275172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275324:-1
position: 275324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:275073-275093:-1:exon

position:275073:-1
position: 275073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275093:-1
position: 275093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:274020-274113:-1:exon

position:274020:-1
position: 274020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274113:-1
position: 274113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:273841-273897:-1:exon

position:273841:-1
position: 273841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273897:-1
position: 273897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:273681-273764:-1:exon

position:273681:-1
position: 273681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273764:-1
position: 273764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
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SIO_000300: 21
SIO_000628: feature:271193-271381:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:271050-271107:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:269961-270949:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:267750-268057:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:267269-267579:-1:exon

STAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: STAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer and activator of transcription 2 isoform X2
translation: MAQWQEVQSLANTYLEQVHQLYAGSALPMAVRQCLAAWIENQNWRQAAEPLSSQSRMLFHSLLVLLGECLGSPGSGHEDFMLKHNLRKAHRDLQAEFEESPERFANLVANLLQEERRILRLGQAGGQGGSVPAPSLAPESDREQRIRRRLAEFHTALQEAERAFRHLEDLQDAFDFCYKVHYQPGEERNRDPQYVQQLQALQAKLQNLDRQRREMLAQMQQLLGRSETLQELLQQELGGWRQRQQRLCLGGPGDASLRPLETWFTELGQGLFQLRQLLRALSDLRQKVTYERDPLVAETPLLEQRLLEQLTHLLKSAFVVEQQPSTPNASKRPLVLRTASKFSTRARLLVRLHDRNHRMEAKIHIDRDPPNIKGFRRFNILTSSSKTLLAGDSPQEGLVCDFQYLTLKEQKDSRSGKGKGTSGEGPLVVTEELHLITFTLAYAYCGLELELETTTLPFVIISNNNQFSSAWASILWFNMLSSDPKAQQFFSSPPPAPWPQLAKVLSWQFESVAERGLSQENLLMLAEKLLGSKPSPNSAVAWPKFSKDGAAGFSFWAWLDGILGLLQEHLKQLWKDGLILGFVSRKQEKKLLKSKRTGTFLLRFSESVFGGVTFTWVEHHERGSPTFHAVDPYTASELVSLALPDIIRDYQMMMEENIPENPLQYLYPDTPRDEAFGPYYSQRQEGTLSESQKYLNRRLIRVSSRQPSKWQTEEELVVTTENLETLQLQPGGQGAQQAGGLALPQPQSSGTPQVTPGNLGTPHGVVTSPGIVQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLRTPQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLGTPQVVAMSPGTLQVVATSPGALQVTPGNLGTPHGMATSPGTLQPTGMLQAQPQSLQRVGSGVPDMRGTLPVAPGAAGTVQVLPAALGTLRPGAAEPLQGPEEQRGTLPLELRDLELLPGGQDMQELLQSLEGLEPGAGTLETLEAAELMPSTVESLDGSFQLSLGSAALLDQHDPFLPQPEDSAPPAVCSLFSTDFPPLHIDASDFQ
SIO_010081: STAT2
subclass of: SO_0000673
so part of: STAT2
location: complement(join(267927..268057,269961..270684,270745..270949,271050..271107,271193..271381,271468..271604,271674..271762,272470..272519,272613..272748,273493..273591,273681..273764,273841..273897,274020..274113,275073..275093,275172..275324,276729..276887,276960..277108,277221..277306,277383..277461,277542..277634,277706..277804,277904..278054,278138..278268))
location: region:267927-278268:-1
so has part: feature:278138-278268:-1:exon
so has part: feature:277904-278054:-1:exon
so has part: feature:277706-277804:-1:exon
so has part: feature:277542-277634:-1:exon
so has part: feature:277383-277461:-1:exon
so has part: feature:277221-277306:-1:exon
so has part: feature:276960-277108:-1:exon
so has part: feature:276729-276887:-1:exon
so has part: feature:275172-275324:-1:exon
so has part: feature:275073-275093:-1:exon
so has part: feature:274020-274113:-1:exon
so has part: feature:273841-273897:-1:exon
so has part: feature:273681-273764:-1:exon
so has part: feature:273493-273591:-1:exon
so has part: feature:272613-272748:-1:exon
so has part: feature:272470-272519:-1:exon
so has part: feature:271674-271762:-1:exon
so has part: feature:271468-271604:-1:exon
so has part: feature:271193-271381:-1:exon
so has part: feature:271050-271107:-1:exon
so has part: feature:270745-270949:-1:exon
so has part: feature:269961-270684:-1:exon
so has part: feature:267927-268057:-1:exon

XP_031949907.1
type: Protein
SIO_000068: ncbiprotein

position:267927:-1
position: 267927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278268:-1
position: 278268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278138-278268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277904-278054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277706-277804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277542-277634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277383-277461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277221-277306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276960-277108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276729-276887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275172-275324:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275073-275093:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274020-274113:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273841-273897:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273681-273764:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273493-273591:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272613-272748:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272470-272519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:271674-271762:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:271468-271604:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271193-271381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:271050-271107:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:270745-270949:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:269961-270684:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:267927-268057:-1:exon

STAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: STAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer and activator of transcription 2 isoform X1
translation: MAQWQEVQSLANTYLEQVHQLYAGSALPMAVRQCLAAWIENQNWRQAAEPLSSQSRMLFHSLLVLLGECLGSPGSGHEDFMLKHNLRKAHRDLQAEFEESPERFANLVANLLQEERRILRLGQAGGQGGSVPAPSLAPESDREQRIRRRLAEFHTALQEAERAFRHLEDLQDAFDFCYKVHYQPGEERNRDPQYVQQLQALQAKLQNLDRQRREMLAQMQQLLGRSETLQELLQQELGGWRQRQQRLCLGGPGDASLRPLETWFTELGQGLFQLRQLLRALSDLRQKVTYERDPLVAETPLLEQRLLEQLTHLLKSAFVVEQQPSTPNASKRPLVLRTASKFSTRARLLVRLHDRNHRMEAKIHIDRDPPNIKGFRRFNILTSSSKTLLAGDSPQEGLVCDFQYLTLKEQKDSRSGKGKGTSGEGPLVVTEELHLITFTLAYAYCGLELELETTTLPFVIISNNNQFSSAWASILWFNMLSSDPKAQQFFSSPPPAPWPQLAKVLSWQFESVAERGLSQENLLMLAEKLLGSKPSPNSAVAWPKFSKDGAAGFSFWAWLDGILGLLQEHLKQLWKDGLILGFVSRKQEKKLLKSKRTGTFLLRFSESVFGGVTFTWVEHHERGSPTFHAVDPYTASELVSLALPDIIRDYQMMMEENIPENPLQYLYPDTPRDEAFGPYYSQRQEGTLSESQKYLNRRLIRVSSRQPSKWQTEEELVVTTENLETLQLQPGGQGAQQAGGLALPQPQSSGTPQVTPGNLGTPHGVVTSPGIVQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLRTPQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLGTPQVVAMSPGTLQVVATSPGALQVTPGNLGTPHGMATSPGTLQPTGMLQAQPQSLQRVGSGVPDMRGTLPVAPGAAGTVQVLPAALGTLRPGAAEPLQGPEEQRGTLPLELRDLELLPGGQDMQELLQSLEGLEPGAGTLETLEAAELMPSTVESLDGSFQLSLGSAALLDQHDPFLPQPEDSAPPAVCSLFSTDFPPLHIDASDFQ
SIO_010081: STAT2
subclass of: SO_0000673
so part of: STAT2
location: complement(join(267927..268057,269961..270949,271050..271107,271193..271381,271468..271604,271674..271762,272470..272519,272613..272748,273493..273591,273681..273764,273841..273897,274020..274113,275073..275093,275172..275324,276729..276887,276960..277108,277221..277306,277383..277461,277542..277634,277706..277804,277904..278054,278138..278268))
location: region:267927-278268:-1
so has part: feature:278138-278268:-1:exon
so has part: feature:277904-278054:-1:exon
so has part: feature:277706-277804:-1:exon
so has part: feature:277542-277634:-1:exon
so has part: feature:277383-277461:-1:exon
so has part: feature:277221-277306:-1:exon
so has part: feature:276960-277108:-1:exon
so has part: feature:276729-276887:-1:exon
so has part: feature:275172-275324:-1:exon
so has part: feature:275073-275093:-1:exon
so has part: feature:274020-274113:-1:exon
so has part: feature:273841-273897:-1:exon
so has part: feature:273681-273764:-1:exon
so has part: feature:273493-273591:-1:exon
so has part: feature:272613-272748:-1:exon
so has part: feature:272470-272519:-1:exon
so has part: feature:271674-271762:-1:exon
so has part: feature:271468-271604:-1:exon
so has part: feature:271193-271381:-1:exon
so has part: feature:271050-271107:-1:exon
so has part: feature:269961-270949:-1:exon
so has part: feature:267927-268057:-1:exon

XP_031949903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278138-278268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277904-278054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277706-277804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277542-277634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277383-277461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277221-277306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276960-277108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276729-276887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275172-275324:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275073-275093:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274020-274113:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273841-273897:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273681-273764:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273493-273591:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272613-272748:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272470-272519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:271674-271762:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:271468-271604:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271193-271381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:271050-271107:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:269961-270949:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:267927-268057:-1:exon

STAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: STAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer and activator of transcription 2 isoform X1
translation: MAQWQEVQSLANTYLEQVHQLYAGSALPMAVRQCLAAWIENQNWRQAAEPLSSQSRMLFHSLLVLLGECLGSPGSGHEDFMLKHNLRKAHRDLQAEFEESPERFANLVANLLQEERRILRLGQAGGQGGSVPAPSLAPESDREQRIRRRLAEFHTALQEAERAFRHLEDLQDAFDFCYKVHYQPGEERNRDPQYVQQLQALQAKLQNLDRQRREMLAQMQQLLGRSETLQELLQQELGGWRQRQQRLCLGGPGDASLRPLETWFTELGQGLFQLRQLLRALSDLRQKVTYERDPLVAETPLLEQRLLEQLTHLLKSAFVVEQQPSTPNASKRPLVLRTASKFSTRARLLVRLHDRNHRMEAKIHIDRDPPNIKGFRRFNILTSSSKTLLAGDSPQEGLVCDFQYLTLKEQKDSRSGKGKGTSGEGPLVVTEELHLITFTLAYAYCGLELELETTTLPFVIISNNNQFSSAWASILWFNMLSSDPKAQQFFSSPPPAPWPQLAKVLSWQFESVAERGLSQENLLMLAEKLLGSKPSPNSAVAWPKFSKDGAAGFSFWAWLDGILGLLQEHLKQLWKDGLILGFVSRKQEKKLLKSKRTGTFLLRFSESVFGGVTFTWVEHHERGSPTFHAVDPYTASELVSLALPDIIRDYQMMMEENIPENPLQYLYPDTPRDEAFGPYYSQRQEGTLSESQKYLNRRLIRVSSRQPSKWQTEEELVVTTENLETLQLQPGGQGAQQAGGLALPQPQSSGTPQVTPGNLGTPHGVVTSPGIVQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLRTPQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLGTPQVVAMSPGTLQVVATSPGALQVTPGNLGTPHGMATSPGTLQPTGMLQAQPQSLQRVGSGVPDMRGTLPVAPGAAGTVQVLPAALGTLRPGAAEPLQGPEEQRGTLPLELRDLELLPGGQDMQELLQSLEGLEPGAGTLETLEAAELMPSTVESLDGSFQLSLGSAALLDQHDPFLPQPEDSAPPAVCSLFSTDFPPLHIDASDFQ
SIO_010081: STAT2
subclass of: SO_0000673
so part of: STAT2
location: complement(join(267927..268057,269961..270949,271050..271107,271193..271381,271468..271604,271674..271762,272470..272519,272613..272748,273493..273591,273681..273764,273841..273897,274020..274113,275073..275093,275172..275324,276729..276887,276960..277108,277221..277306,277383..277461,277542..277634,277706..277804,277904..278054,278138..278268))
location: region:267927-278268:-1
so has part: feature:278138-278268:-1:exon
so has part: feature:277904-278054:-1:exon
so has part: feature:277706-277804:-1:exon
so has part: feature:277542-277634:-1:exon
so has part: feature:277383-277461:-1:exon
so has part: feature:277221-277306:-1:exon
so has part: feature:276960-277108:-1:exon
so has part: feature:276729-276887:-1:exon
so has part: feature:275172-275324:-1:exon
so has part: feature:275073-275093:-1:exon
so has part: feature:274020-274113:-1:exon
so has part: feature:273841-273897:-1:exon
so has part: feature:273681-273764:-1:exon
so has part: feature:273493-273591:-1:exon
so has part: feature:272613-272748:-1:exon
so has part: feature:272470-272519:-1:exon
so has part: feature:271674-271762:-1:exon
so has part: feature:271468-271604:-1:exon
so has part: feature:271193-271381:-1:exon
so has part: feature:271050-271107:-1:exon
so has part: feature:269961-270949:-1:exon
so has part: feature:267927-268057:-1:exon

XP_031949904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278138-278268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277904-278054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277706-277804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277542-277634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277383-277461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277221-277306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276960-277108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276729-276887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275172-275324:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275073-275093:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274020-274113:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273841-273897:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273681-273764:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273493-273591:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272613-272748:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272470-272519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:271674-271762:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:271468-271604:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271193-271381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:271050-271107:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:269961-270949:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:267927-268057:-1:exon

STAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: STAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer and activator of transcription 2 isoform X1
translation: MAQWQEVQSLANTYLEQVHQLYAGSALPMAVRQCLAAWIENQNWRQAAEPLSSQSRMLFHSLLVLLGECLGSPGSGHEDFMLKHNLRKAHRDLQAEFEESPERFANLVANLLQEERRILRLGQAGGQGGSVPAPSLAPESDREQRIRRRLAEFHTALQEAERAFRHLEDLQDAFDFCYKVHYQPGEERNRDPQYVQQLQALQAKLQNLDRQRREMLAQMQQLLGRSETLQELLQQELGGWRQRQQRLCLGGPGDASLRPLETWFTELGQGLFQLRQLLRALSDLRQKVTYERDPLVAETPLLEQRLLEQLTHLLKSAFVVEQQPSTPNASKRPLVLRTASKFSTRARLLVRLHDRNHRMEAKIHIDRDPPNIKGFRRFNILTSSSKTLLAGDSPQEGLVCDFQYLTLKEQKDSRSGKGKGTSGEGPLVVTEELHLITFTLAYAYCGLELELETTTLPFVIISNNNQFSSAWASILWFNMLSSDPKAQQFFSSPPPAPWPQLAKVLSWQFESVAERGLSQENLLMLAEKLLGSKPSPNSAVAWPKFSKDGAAGFSFWAWLDGILGLLQEHLKQLWKDGLILGFVSRKQEKKLLKSKRTGTFLLRFSESVFGGVTFTWVEHHERGSPTFHAVDPYTASELVSLALPDIIRDYQMMMEENIPENPLQYLYPDTPRDEAFGPYYSQRQEGTLSESQKYLNRRLIRVSSRQPSKWQTEEELVVTTENLETLQLQPGGQGAQQAGGLALPQPQSSGTPQVTPGNLGTPHGVVTSPGIVQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLRTPQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLGTPQVVAMSPGTLQVVATSPGALQVTPGNLGTPHGMATSPGTLQPTGMLQAQPQSLQRVGSGVPDMRGTLPVAPGAAGTVQVLPAALGTLRPGAAEPLQGPEEQRGTLPLELRDLELLPGGQDMQELLQSLEGLEPGAGTLETLEAAELMPSTVESLDGSFQLSLGSAALLDQHDPFLPQPEDSAPPAVCSLFSTDFPPLHIDASDFQ
SIO_010081: STAT2
subclass of: SO_0000673
so part of: STAT2
location: complement(join(267927..268057,269961..270949,271050..271107,271193..271381,271468..271604,271674..271762,272470..272519,272613..272748,273493..273591,273681..273764,273841..273897,274020..274113,275073..275093,275172..275324,276729..276887,276960..277108,277221..277306,277383..277461,277542..277634,277706..277804,277904..278054,278138..278268))
location: region:267927-278268:-1
so has part: feature:278138-278268:-1:exon
so has part: feature:277904-278054:-1:exon
so has part: feature:277706-277804:-1:exon
so has part: feature:277542-277634:-1:exon
so has part: feature:277383-277461:-1:exon
so has part: feature:277221-277306:-1:exon
so has part: feature:276960-277108:-1:exon
so has part: feature:276729-276887:-1:exon
so has part: feature:275172-275324:-1:exon
so has part: feature:275073-275093:-1:exon
so has part: feature:274020-274113:-1:exon
so has part: feature:273841-273897:-1:exon
so has part: feature:273681-273764:-1:exon
so has part: feature:273493-273591:-1:exon
so has part: feature:272613-272748:-1:exon
so has part: feature:272470-272519:-1:exon
so has part: feature:271674-271762:-1:exon
so has part: feature:271468-271604:-1:exon
so has part: feature:271193-271381:-1:exon
so has part: feature:271050-271107:-1:exon
so has part: feature:269961-270949:-1:exon
so has part: feature:267927-268057:-1:exon

XP_031949905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278138-278268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277904-278054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277706-277804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277542-277634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277383-277461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277221-277306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276960-277108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276729-276887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275172-275324:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275073-275093:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274020-274113:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273841-273897:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273681-273764:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273493-273591:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272613-272748:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272470-272519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:271674-271762:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:271468-271604:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271193-271381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:271050-271107:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:269961-270949:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:267927-268057:-1:exon

STAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: STAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer and activator of transcription 2 isoform X1
translation: MAQWQEVQSLANTYLEQVHQLYAGSALPMAVRQCLAAWIENQNWRQAAEPLSSQSRMLFHSLLVLLGECLGSPGSGHEDFMLKHNLRKAHRDLQAEFEESPERFANLVANLLQEERRILRLGQAGGQGGSVPAPSLAPESDREQRIRRRLAEFHTALQEAERAFRHLEDLQDAFDFCYKVHYQPGEERNRDPQYVQQLQALQAKLQNLDRQRREMLAQMQQLLGRSETLQELLQQELGGWRQRQQRLCLGGPGDASLRPLETWFTELGQGLFQLRQLLRALSDLRQKVTYERDPLVAETPLLEQRLLEQLTHLLKSAFVVEQQPSTPNASKRPLVLRTASKFSTRARLLVRLHDRNHRMEAKIHIDRDPPNIKGFRRFNILTSSSKTLLAGDSPQEGLVCDFQYLTLKEQKDSRSGKGKGTSGEGPLVVTEELHLITFTLAYAYCGLELELETTTLPFVIISNNNQFSSAWASILWFNMLSSDPKAQQFFSSPPPAPWPQLAKVLSWQFESVAERGLSQENLLMLAEKLLGSKPSPNSAVAWPKFSKDGAAGFSFWAWLDGILGLLQEHLKQLWKDGLILGFVSRKQEKKLLKSKRTGTFLLRFSESVFGGVTFTWVEHHERGSPTFHAVDPYTASELVSLALPDIIRDYQMMMEENIPENPLQYLYPDTPRDEAFGPYYSQRQEGTLSESQKYLNRRLIRVSSRQPSKWQTEEELVVTTENLETLQLQPGGQGAQQAGGLALPQPQSSGTPQVTPGNLGTPHGVVTSPGIVQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLRTPQVVATSPGIPQVTPGNLGTPQVVATSPGIPQVTPGNLGTPQVVAMSPGTLQVVATSPGALQVTPGNLGTPHGMATSPGTLQPTGMLQAQPQSLQRVGSGVPDMRGTLPVAPGAAGTVQVLPAALGTLRPGAAEPLQGPEEQRGTLPLELRDLELLPGGQDMQELLQSLEGLEPGAGTLETLEAAELMPSTVESLDGSFQLSLGSAALLDQHDPFLPQPEDSAPPAVCSLFSTDFPPLHIDASDFQ
SIO_010081: STAT2
subclass of: SO_0000673
so part of: STAT2
location: complement(join(267927..268057,269961..270949,271050..271107,271193..271381,271468..271604,271674..271762,272470..272519,272613..272748,273493..273591,273681..273764,273841..273897,274020..274113,275073..275093,275172..275324,276729..276887,276960..277108,277221..277306,277383..277461,277542..277634,277706..277804,277904..278054,278138..278268))
location: region:267927-278268:-1
so has part: feature:278138-278268:-1:exon
so has part: feature:277904-278054:-1:exon
so has part: feature:277706-277804:-1:exon
so has part: feature:277542-277634:-1:exon
so has part: feature:277383-277461:-1:exon
so has part: feature:277221-277306:-1:exon
so has part: feature:276960-277108:-1:exon
so has part: feature:276729-276887:-1:exon
so has part: feature:275172-275324:-1:exon
so has part: feature:275073-275093:-1:exon
so has part: feature:274020-274113:-1:exon
so has part: feature:273841-273897:-1:exon
so has part: feature:273681-273764:-1:exon
so has part: feature:273493-273591:-1:exon
so has part: feature:272613-272748:-1:exon
so has part: feature:272470-272519:-1:exon
so has part: feature:271674-271762:-1:exon
so has part: feature:271468-271604:-1:exon
so has part: feature:271193-271381:-1:exon
so has part: feature:271050-271107:-1:exon
so has part: feature:269961-270949:-1:exon
so has part: feature:267927-268057:-1:exon

XP_031949906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278138-278268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277904-278054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277706-277804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277542-277634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277383-277461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277221-277306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276960-277108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276729-276887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275172-275324:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275073-275093:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274020-274113:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273841-273897:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273681-273764:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273493-273591:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272613-272748:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272470-272519:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:271674-271762:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:271468-271604:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271193-271381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:271050-271107:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:269961-270949:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:267927-268057:-1:exon

APOF
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: APOF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(279713..280853)
location: region:279713-280853:-1
so has part: feature:279713-280853:-1:exon
subclass of: SO_0000010

116436716
type: Gene
SIO_000068: ncbigene

position:279713:-1
position: 279713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280853:-1
position: 280853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279713-280853:-1:exon

APOF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: APOF
product: apolipoprotein F
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032094017.1
SIO_010081: APOF
subclass of: SO_0000673
so part of: APOF
location: complement(join(279713..280663,280745..280853))
location: region:279713-280853:-1
so has part: feature:280745-280853:-1:exon
so has part: feature:279713-280663:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280745-280853:-1:exon

position:280745:-1
position: 280745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279713-280663:-1:exon

position:280663:-1
position: 280663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: APOF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein F
translation: MSQLPDNNGYKGVTRPAAATVAGQGRGQRRADPPRAATMPRLLLFLLFLILGRAIAVSDISPGPAASDQELAEQDRPLLAGLAEPVRPRALGVPCQTLRPAALPGFSRLPPLPRGLARAALALALLGAGCAPQAEAEALELERELGTPTAAALLRGLARLPGTPVPRPLALLLLSLARPGGSACADPTQLRTPVPGTEPTALSGHGVREFPGVRLCRGTVRRRREDEDACSPAGEREAHRVLDWVPGVSIFYNLGTSIYFAFQGCEATASTRALEAAEDLGYAGLAALTGGLGGPVAMGVQLGLQPGLKAGVRALIGYFTSAGEPSPVPTAHSGPVVIV
SIO_010081: APOF
subclass of: SO_0000673
so part of: APOF
location: complement(join(279738..280663,280745..280838))
location: region:279738-280838:-1
so has part: feature:280745-280838:-1:exon
so has part: feature:279738-280663:-1:exon

XP_031949908.1
type: Protein
SIO_000068: ncbiprotein

position:279738:-1
position: 279738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280838:-1
position: 280838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280745-280838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279738-280663:-1:exon

TIMELESS
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TIMELESS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(280895..292662)
location: region:280895-292662:-1
so has part: feature:280895-292662:-1:exon
subclass of: SO_0000010

116436599
type: Gene
SIO_000068: ncbigene

position:280895:-1
position: 280895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292662:-1
position: 292662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280895-292662:-1:exon

TIMELESS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TIMELESS
product: timeless circadian regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 34 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093823.1
SIO_010081: TIMELESS
subclass of: SO_0000673
so part of: TIMELESS
location: complement(join(280895..281339,281447..281556,281648..281687,281762..281906,282004..282122,282192..282260,282340..282511,282627..282781,282853..282935,283017..283140,283232..283317,283388..283539,284539..284740,284816..284924,285000..285097,285172..285323,285401..285520,285597..285766,285847..285950,286562..286779,286855..287031,287445..287532,287613..287746,287820..287978,288070..288171,288566..288628,288705..288819,288908..289061,289140..289439,290132..290283,290744..290967,291166..291372,291470..291634,292164..292662))
location: region:280895-292662:-1
so has part: feature:292164-292662:-1:exon
so has part: feature:291470-291634:-1:exon
so has part: feature:291166-291372:-1:exon
so has part: feature:290744-290967:-1:exon
so has part: feature:290132-290283:-1:exon
so has part: feature:289140-289439:-1:exon
so has part: feature:288908-289061:-1:exon
so has part: feature:288705-288819:-1:exon
so has part: feature:288566-288628:-1:exon
so has part: feature:288070-288171:-1:exon
so has part: feature:287820-287978:-1:exon
so has part: feature:287613-287746:-1:exon
so has part: feature:287445-287532:-1:exon
so has part: feature:286855-287031:-1:exon
so has part: feature:286562-286779:-1:exon
so has part: feature:285847-285950:-1:exon
so has part: feature:285597-285766:-1:exon
so has part: feature:285401-285520:-1:exon
so has part: feature:285172-285323:-1:exon
so has part: feature:285000-285097:-1:exon
so has part: feature:284816-284924:-1:exon
so has part: feature:284539-284740:-1:exon
so has part: feature:283388-283539:-1:exon
so has part: feature:283232-283317:-1:exon
so has part: feature:283017-283140:-1:exon
so has part: feature:282853-282935:-1:exon
so has part: feature:282627-282781:-1:exon
so has part: feature:282340-282511:-1:exon
so has part: feature:282192-282260:-1:exon
so has part: feature:282004-282122:-1:exon
so has part: feature:281762-281906:-1:exon
so has part: feature:281648-281687:-1:exon
so has part: feature:281447-281556:-1:exon
so has part: feature:280895-281339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292164-292662:-1:exon

position:292164:-1
position: 292164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291470-291634:-1:exon

position:291470:-1
position: 291470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291634:-1
position: 291634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:291166-291372:-1:exon

position:291166:-1
position: 291166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291372:-1
position: 291372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:290744-290967:-1:exon

position:290744:-1
position: 290744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290967:-1
position: 290967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290132-290283:-1:exon

position:290132:-1
position: 290132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290283:-1
position: 290283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:289140-289439:-1:exon

position:289140:-1
position: 289140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289439:-1
position: 289439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:288908-289061:-1:exon

position:288908:-1
position: 288908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289061:-1
position: 289061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:288705-288819:-1:exon

position:288705:-1
position: 288705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288819:-1
position: 288819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:288566-288628:-1:exon

position:288566:-1
position: 288566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288628:-1
position: 288628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:288070-288171:-1:exon

position:288070:-1
position: 288070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288171:-1
position: 288171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:287820-287978:-1:exon

position:287820:-1
position: 287820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287978:-1
position: 287978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:287613-287746:-1:exon

position:287613:-1
position: 287613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287746:-1
position: 287746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:287445-287532:-1:exon

position:287445:-1
position: 287445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287532:-1
position: 287532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:286855-287031:-1:exon

position:286855:-1
position: 286855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287031:-1
position: 287031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:286562-286779:-1:exon

position:286562:-1
position: 286562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286779:-1
position: 286779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:285847-285950:-1:exon

position:285847:-1
position: 285847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285950:-1
position: 285950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:285597-285766:-1:exon

position:285597:-1
position: 285597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285766:-1
position: 285766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:285401-285520:-1:exon

position:285401:-1
position: 285401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285520:-1
position: 285520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:285172-285323:-1:exon

position:285172:-1
position: 285172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285323:-1
position: 285323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:285000-285097:-1:exon

position:285000:-1
position: 285000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285097:-1
position: 285097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:284816-284924:-1:exon

position:284816:-1
position: 284816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284924:-1
position: 284924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:284539-284740:-1:exon

position:284539:-1
position: 284539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284740:-1
position: 284740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:283388-283539:-1:exon

position:283388:-1
position: 283388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283539:-1
position: 283539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:283232-283317:-1:exon

position:283232:-1
position: 283232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283317:-1
position: 283317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:283017-283140:-1:exon

position:283017:-1
position: 283017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283140:-1
position: 283140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:282853-282935:-1:exon

position:282853:-1
position: 282853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282935:-1
position: 282935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:282627-282781:-1:exon

position:282627:-1
position: 282627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282781:-1
position: 282781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:282340-282511:-1:exon

position:282340:-1
position: 282340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282511:-1
position: 282511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:282192-282260:-1:exon

position:282192:-1
position: 282192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282260:-1
position: 282260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:282004-282122:-1:exon

position:282004:-1
position: 282004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282122:-1
position: 282122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:281762-281906:-1:exon

position:281762:-1
position: 281762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281906:-1
position: 281906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:281648-281687:-1:exon

position:281648:-1
position: 281648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281687:-1
position: 281687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:281447-281556:-1:exon

position:281447:-1
position: 281447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281556:-1
position: 281556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:280895-281339:-1:exon

position:281339:-1
position: 281339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMELESS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TIMELESS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein timeless homolog
translation: MRELRSSAFWRAVLAEFLGSLLYALLGLGASLRWAPGPPSVVGAALAFGLAQTTLVQALGHVSGGHVNPAITLAFLVASQLSLPRALGYLLAQVLGMLAGAGVLYGVTPAPVRGTLGLSALHPGVGPGQGTVVELLLTAQFVLCVFASFDDRHDGRPGMAAVPVGFSLALGHLFGIHYTGASMNPARSFAPAVITRNFANHWVSGGGRGPPNPPRAPPVPPRLSLSCPSRCVPAEGGRLPVSPRVYWAGPLLGAALGAVLYEFALCPRPRSLAERLAALKGEPPAPTAVTAVTAVTAVTAAEPPPEPPAEPLELKTQGLAAGRGARAAGFGAYRGTEPPVGARGGRRGTCVEGGTRRATGSVSGRCRLKGPGLGGPSVLGRLGPEAAPGSGGPGPAGGPVSGELGTGGRTPARGYRAAGLTVARRPPVLVPSAAPRCMDWYMMNCELLATCSALGYLEGDVYHREPDCLESVKDLIRYLRHEDETRDVRQQLGAAQILQNDLLPILVQYPQDKVLFDAVIRLMVNLTQPALLCFGKVPSDSASRHYFLQVLSYLQAYKEAFASEKVFVVLSEKLYNLLQLDWEQRQEEDTLLIERILLLVRNVLHVPPDPTEEQQGVDGDASVHDRVLWALHISGMDDLLKFLASAQVEQQWALHVLEIISLMFRDQSPEELAALGQGTAGAEHGEDTRELESLRQRELAEKRARALQRPSRHSRFGGSYVLQGFKSIGDRDVVFHKGLHNLKSYTHDLGKEPQRVPRHRQAAPESEPSRRSARNVRLFLRHFCQDFLEGCYNRLMLLVKDQLVREKAQQHDETYYLWATAFFMAFNRCRGFRPELVSETVGVRAFHFIEQNLTTYYEMALMDKKEATTWARRMHLALKAYQELLRTVQEMDRSPEQAVRDSSQVIKSNIFYLMEYRELFLALFRKFDETKQPRSFLRDLVETAHLFLRMLERFCRGRANLVVQSKRVRRKKKPRAPAPPAPPSAAELEQLWEGLAPQLQACLEGEVPLPEDVVPFDAASETPVEEQRAEALLRIQECLRDSRVPQALRLLRSARDVWPEGDVFGAADAGPPEETQLLREILVAPLPRHAPEEPEEEEEEDEEEEEQTVQVSEKEFNFLDYLKRFACAPVVRALVLLLRGYAQNSPRTNHCAARLLHRLARDLRMEPLLFQLSLFALFHRLLSDPAAAAHQELVALAKFILGKFFALAATNKKAFVELLFWKSPAIVCEMTKGYSSLQEGEGTTRSRVSPWTPQEEQELQELYWKYKEVEGGDIIAAILAHLPTPGRTRRQVVKQLVRMGLASSAKDFQQERKGTRIVLWTQEQEEELTRLFEEFQGSDDVLGNIMKHLTARRSRARVVEKLLGLGLVAERKELFKKRRRKGHGHGPGPGQAAVSVPAVPAQDSSGEDEDSEEEEEEDEDEAEEGPMEEHWVPEEGAGQDLAQHLHQEGLAGPLRWLETCLRRVAGDREEDGVSHPVPLVPLTEENEDAMEDRRFRTLLRQLGLRPPASEQESFWRIPAALTPQQLRRAAASIARHGHDLSGSPQDPPEPPGCPQDPAPAEPLPAGLGSDSESEEPVPVPIPVPSPVQPRTKRRRELASEDEDEDGGSSGTEPAPAAPCSKEDEEDEDPQPRGRRKRIRCLEEEEEEDEG
SIO_010081: TIMELESS
subclass of: SO_0000673
so part of: TIMELESS
location: complement(join(281215..281339,281447..281556,281648..281687,281762..281906,282004..282122,282192..282260,282340..282511,282627..282781,282853..282935,283017..283140,283232..283317,283388..283539,284539..284740,284816..284924,285000..285097,285172..285323,285401..285520,285597..285766,285847..285950,286562..286779,286855..287031,287445..287532,287613..287746,287820..287978,288070..288171,288566..288628,288705..288819,288908..289061,289140..289439,290132..290283,290744..290967,291166..291372,291470..291634,292164..292523))
location: region:281215-292523:-1
so has part: feature:292164-292523:-1:exon
so has part: feature:291470-291634:-1:exon
so has part: feature:291166-291372:-1:exon
so has part: feature:290744-290967:-1:exon
so has part: feature:290132-290283:-1:exon
so has part: feature:289140-289439:-1:exon
so has part: feature:288908-289061:-1:exon
so has part: feature:288705-288819:-1:exon
so has part: feature:288566-288628:-1:exon
so has part: feature:288070-288171:-1:exon
so has part: feature:287820-287978:-1:exon
so has part: feature:287613-287746:-1:exon
so has part: feature:287445-287532:-1:exon
so has part: feature:286855-287031:-1:exon
so has part: feature:286562-286779:-1:exon
so has part: feature:285847-285950:-1:exon
so has part: feature:285597-285766:-1:exon
so has part: feature:285401-285520:-1:exon
so has part: feature:285172-285323:-1:exon
so has part: feature:285000-285097:-1:exon
so has part: feature:284816-284924:-1:exon
so has part: feature:284539-284740:-1:exon
so has part: feature:283388-283539:-1:exon
so has part: feature:283232-283317:-1:exon
so has part: feature:283017-283140:-1:exon
so has part: feature:282853-282935:-1:exon
so has part: feature:282627-282781:-1:exon
so has part: feature:282340-282511:-1:exon
so has part: feature:282192-282260:-1:exon
so has part: feature:282004-282122:-1:exon
so has part: feature:281762-281906:-1:exon
so has part: feature:281648-281687:-1:exon
so has part: feature:281447-281556:-1:exon
so has part: feature:281215-281339:-1:exon

XP_031949714.1
type: Protein
SIO_000068: ncbiprotein

position:281215:-1
position: 281215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292523:-1
position: 292523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292164-292523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291470-291634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291166-291372:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290744-290967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290132-290283:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289140-289439:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288908-289061:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288705-288819:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:288566-288628:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:288070-288171:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287820-287978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:287613-287746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287445-287532:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:286855-287031:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:286562-286779:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:285847-285950:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:285597-285766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:285401-285520:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:285172-285323:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:285000-285097:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:284816-284924:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:284539-284740:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:283388-283539:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:283232-283317:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:283017-283140:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:282853-282935:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:282627-282781:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:282340-282511:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:282192-282260:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:282004-282122:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:281762-281906:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:281648-281687:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:281447-281556:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:281215-281339:-1:exon

MIP
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: MIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(293324..296292)
location: region:293324-296292:-1
so has part: feature:293324-296292:-1:exon
subclass of: SO_0000010

116436717
type: Gene
SIO_000068: ncbigene

position:293324:-1
position: 293324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296292:-1
position: 296292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293324-296292:-1:exon

MIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MIP
product: major intrinsic protein of lens fiber, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032094019.1
SIO_010081: MIP
subclass of: SO_0000673
so part of: MIP
location: complement(join(293324..293712,294148..294228,294527..294847,295552..296292))
location: region:293324-296292:-1
so has part: feature:295552-296292:-1:exon
so has part: feature:294527-294847:-1:exon
so has part: feature:294148-294228:-1:exon
so has part: feature:293324-293712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295552-296292:-1:exon

position:295552:-1
position: 295552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294527-294847:-1:exon

position:294527:-1
position: 294527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294847:-1
position: 294847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294148-294228:-1:exon

position:294148:-1
position: 294148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294228:-1
position: 294228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:293324-293712:-1:exon

position:293712:-1
position: 293712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MIP
product: major intrinsic protein of lens fiber, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032094018.1
SIO_010081: MIP
subclass of: SO_0000673
so part of: MIP
location: complement(join(293324..293712,294148..294228,294304..294456,294527..294847,295552..296292))
location: region:293324-296292:-1
so has part: feature:295552-296292:-1:exon
so has part: feature:294527-294847:-1:exon
so has part: feature:294304-294456:-1:exon
so has part: feature:294148-294228:-1:exon
so has part: feature:293324-293712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295552-296292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294527-294847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:294304-294456:-1:exon

position:294304:-1
position: 294304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294456:-1
position: 294456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:294148-294228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293324-293712:-1:exon

MIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens fiber major intrinsic protein isoform X2
translation: MAIREELCSGHFWRGVLAEVAATLIFVGVVLGASAAPGPLAPALAGGLAAGGLVCTLGGPQANPALTLALLCTRKTSALRGAAGVLAQCAGATLASAAARAALPDDTGLVTRGPFSGGSMNPARSLGPAIVTGVWDDHWVYWLGPVLGAVLAGLSYEFVLAPGASREKLGACLACRDVALVETPSLSPSSVAHDPSASPAEQREPGTA
SIO_010081: MIP
subclass of: SO_0000673
so part of: MIP
location: complement(join(293503..293712,294148..294228,294527..294847,295552..295566))
location: region:293503-295566:-1
so has part: feature:295552-295566:-1:exon
so has part: feature:294527-294847:-1:exon
so has part: feature:294148-294228:-1:exon
so has part: feature:293503-293712:-1:exon

XP_031949910.1
type: Protein
SIO_000068: ncbiprotein

position:293503:-1
position: 293503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295566:-1
position: 295566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295552-295566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294527-294847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:294148-294228:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293503-293712:-1:exon

MIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens fiber major intrinsic protein isoform X1
translation: MAIREELCSGHFWRGVLAEVAATLIFVGVVLGASAAPGPLAPALAGGLAAGGLVCTLGGPQANPALTLALLCTRKTSALRGAAGVLAQCAGATLASAAARAALPDDTGLVTRVSAVGTAGTALAWETFATFQLALAAFAAAEHAAPQAGLALGSAVAAGALAAGPFSGGSMNPARSLGPAIVTGVWDDHWVYWLGPVLGAVLAGLSYEFVLAPGASREKLGACLACRDVALVETPSLSPSSVAHDPSASPAEQREPGTA
SIO_010081: MIP
subclass of: SO_0000673
so part of: MIP
location: complement(join(293503..293712,294148..294228,294304..294456,294527..294847,295552..295566))
location: region:293503-295566:-1
so has part: feature:295552-295566:-1:exon
so has part: feature:294527-294847:-1:exon
so has part: feature:294304-294456:-1:exon
so has part: feature:294148-294228:-1:exon
so has part: feature:293503-293712:-1:exon

XP_031949909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295552-295566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294527-294847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:294304-294456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294148-294228:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293503-293712:-1:exon

RBMS2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: RBMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 299500..305845
location: region:299500-305845:1
so has part: feature:299500-305845:1:exon
subclass of: SO_0000010

116436837
type: Gene
SIO_000068: ncbigene

position:299500:1
position: 299500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305845:1
position: 305845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299500-305845:1:exon

RBMS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RBMS2
product: RNA binding motif single stranded interacting protein 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_032094249.1
SIO_010081: RBMS2
subclass of: SO_0000673
so part of: RBMS2
location: join(299500..299864,300932..301081,301182..301240,301328..301664,302311..302390,302485..302594,302678..302724,302809..302902,303011..303058,305037..305144,305229..305306,305407..305845)
location: region:299500-305845:1
so has part: feature:299500-299864:1:exon
so has part: feature:300932-301081:1:exon
so has part: feature:301182-301240:1:exon
so has part: feature:301328-301664:1:exon
so has part: feature:302311-302390:1:exon
so has part: feature:302485-302594:1:exon
so has part: feature:302678-302724:1:exon
so has part: feature:302809-302902:1:exon
so has part: feature:303011-303058:1:exon
so has part: feature:305037-305144:1:exon
so has part: feature:305229-305306:1:exon
so has part: feature:305407-305845:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299500-299864:1:exon

position:299864:1
position: 299864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300932-301081:1:exon

position:300932:1
position: 300932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301081:1
position: 301081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301182-301240:1:exon

position:301182:1
position: 301182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301240:1
position: 301240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:301328-301664:1:exon

position:301328:1
position: 301328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301664:1
position: 301664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:302311-302390:1:exon

position:302311:1
position: 302311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302390:1
position: 302390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:302485-302594:1:exon

position:302485:1
position: 302485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302594:1
position: 302594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:302678-302724:1:exon

position:302678:1
position: 302678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302724:1
position: 302724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:302809-302902:1:exon

position:302809:1
position: 302809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302902:1
position: 302902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:303011-303058:1:exon

position:303011:1
position: 303011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303058:1
position: 303058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:305037-305144:1:exon

position:305037:1
position: 305037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305144:1
position: 305144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:305229-305306:1:exon

position:305229:1
position: 305229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305306:1
position: 305306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:305407-305845:1:exon

position:305407:1
position: 305407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBMS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RBMS2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RNA-binding motif, single-stranded-interacting protein 2
translation: MLLSVPPRSGLPAFAYNKGGKKQPYVPPAQPLGPPSPSPAGGGPGXQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPTAAQKAVTALKASGVQAQMAKVWSPLTPTAPRDPHTGPGSPLTAPCPPKQQQEQDPTNLYISNLPLGVDEQELEALLKPFGQVVSTRILRDPHGASRGVGFARMESTEKCEAVITHFNGKFIKTPPGVPAPPDPLLCKFADGGQKKRQSQGKFVSNGRAWARDGDTGTVTLAYDPATALQNGFYPAPYGLAPGRMLPPAALAPYLPSPVSSYQVHGPTWMHQSYLVQPTGAVLAPAVDHAVPLQPSVVAPLAQQLGHLSLGSAGTYVPAAAAVPGAFIPPYPPVPAALPLEDGGATPTHGPIESPSEPGAFPYPYPK
SIO_010081: RBMS2
subclass of: SO_0000673
so part of: RBMS2
location: join(299799..299864,300932..301081,301182..301240,301328..301664,302311..302390,302485..302594,302678..302724,302809..302902,303011..303058,305037..305144,305229..305306,305407..305487)
location: region:299799-305487:1
so has part: feature:299799-299864:1:exon
so has part: feature:300932-301081:1:exon
so has part: feature:301182-301240:1:exon
so has part: feature:301328-301664:1:exon
so has part: feature:302311-302390:1:exon
so has part: feature:302485-302594:1:exon
so has part: feature:302678-302724:1:exon
so has part: feature:302809-302902:1:exon
so has part: feature:303011-303058:1:exon
so has part: feature:305037-305144:1:exon
so has part: feature:305229-305306:1:exon
so has part: feature:305407-305487:1:exon

XP_031950140.1
type: Protein
SIO_000068: ncbiprotein

position:299799:1
position: 299799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305487:1
position: 305487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299799-299864:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300932-301081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301182-301240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301328-301664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:302311-302390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302485-302594:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302678-302724:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302809-302902:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:303011-303058:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305037-305144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305229-305306:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305407-305487:1:exon

BAZ2A
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: BAZ2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(310702..327814)
location: region:310702-327814:-1
so has part: feature:310702-327814:-1:exon
subclass of: SO_0000010

116436803
type: Gene
SIO_000068: ncbigene

position:310702:-1
position: 310702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327814:-1
position: 327814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310702-327814:-1:exon

BAZ2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: BAZ2A
product: bromodomain adjacent to zinc finger domain 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_032094196.1
SIO_010081: BAZ2A
subclass of: SO_0000673
so part of: BAZ2A
location: complement(join(310702..310965,311742..311885,311971..312197,313347..313493,314679..314811,315526..315809,315885..316048,316550..316705,316789..317014,317413..317990,318084..318219,318301..318360,318447..318609,318749..318823,318963..319177,320109..320363,320449..320640,320746..320811,320903..320964,321054..321264,321348..321449,321612..321720,322131..322191,322284..322541,322758..322943,323454..323636,323952..324515,325020..325157,327778..327814))
location: region:310702-327814:-1
so has part: feature:327778-327814:-1:exon
so has part: feature:325020-325157:-1:exon
so has part: feature:323952-324515:-1:exon
so has part: feature:323454-323636:-1:exon
so has part: feature:322758-322943:-1:exon
so has part: feature:322284-322541:-1:exon
so has part: feature:322131-322191:-1:exon
so has part: feature:321612-321720:-1:exon
so has part: feature:321348-321449:-1:exon
so has part: feature:321054-321264:-1:exon
so has part: feature:320903-320964:-1:exon
so has part: feature:320746-320811:-1:exon
so has part: feature:320449-320640:-1:exon
so has part: feature:320109-320363:-1:exon
so has part: feature:318963-319177:-1:exon
so has part: feature:318749-318823:-1:exon
so has part: feature:318447-318609:-1:exon
so has part: feature:318301-318360:-1:exon
so has part: feature:318084-318219:-1:exon
so has part: feature:317413-317990:-1:exon
so has part: feature:316789-317014:-1:exon
so has part: feature:316550-316705:-1:exon
so has part: feature:315885-316048:-1:exon
so has part: feature:315526-315809:-1:exon
so has part: feature:314679-314811:-1:exon
so has part: feature:313347-313493:-1:exon
so has part: feature:311971-312197:-1:exon
so has part: feature:311742-311885:-1:exon
so has part: feature:310702-310965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327778-327814:-1:exon

position:327778:-1
position: 327778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325020-325157:-1:exon

position:325020:-1
position: 325020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325157:-1
position: 325157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:323952-324515:-1:exon

position:323952:-1
position: 323952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324515:-1
position: 324515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:323454-323636:-1:exon

position:323454:-1
position: 323454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323636:-1
position: 323636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:322758-322943:-1:exon

position:322758:-1
position: 322758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322943:-1
position: 322943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:322284-322541:-1:exon

position:322284:-1
position: 322284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322541:-1
position: 322541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:322131-322191:-1:exon

position:322131:-1
position: 322131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322191:-1
position: 322191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:321612-321720:-1:exon

position:321612:-1
position: 321612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321720:-1
position: 321720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:321348-321449:-1:exon

position:321348:-1
position: 321348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321449:-1
position: 321449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:321054-321264:-1:exon

position:321054:-1
position: 321054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321264:-1
position: 321264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:320903-320964:-1:exon

position:320903:-1
position: 320903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320964:-1
position: 320964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:320746-320811:-1:exon

position:320746:-1
position: 320746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320811:-1
position: 320811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:320449-320640:-1:exon

position:320449:-1
position: 320449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320640:-1
position: 320640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:320109-320363:-1:exon

position:320109:-1
position: 320109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320363:-1
position: 320363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:318963-319177:-1:exon

position:318963:-1
position: 318963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319177:-1
position: 319177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:318749-318823:-1:exon

position:318749:-1
position: 318749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318823:-1
position: 318823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:318447-318609:-1:exon

position:318447:-1
position: 318447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318609:-1
position: 318609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:318301-318360:-1:exon

position:318301:-1
position: 318301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318360:-1
position: 318360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:318084-318219:-1:exon

position:318084:-1
position: 318084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318219:-1
position: 318219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:317413-317990:-1:exon

position:317413:-1
position: 317413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317990:-1
position: 317990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:316789-317014:-1:exon

position:316789:-1
position: 316789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317014:-1
position: 317014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:316550-316705:-1:exon

position:316550:-1
position: 316550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316705:-1
position: 316705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:315885-316048:-1:exon

position:315885:-1
position: 315885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316048:-1
position: 316048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:315526-315809:-1:exon

position:315526:-1
position: 315526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315809:-1
position: 315809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:314679-314811:-1:exon

position:314679:-1
position: 314679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314811:-1
position: 314811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:313347-313493:-1:exon

position:313347:-1
position: 313347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313493:-1
position: 313493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:311971-312197:-1:exon

position:311971:-1
position: 311971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312197:-1
position: 312197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:311742-311885:-1:exon

position:311742:-1
position: 311742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311885:-1
position: 311885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:310702-310965:-1:exon

position:310965:-1
position: 310965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BAZ2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: BAZ2A
product: bromodomain adjacent to zinc finger domain 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_032094195.1
SIO_010081: BAZ2A
subclass of: SO_0000673
so part of: BAZ2A
location: complement(join(310702..310965,311742..311885,311971..312197,313347..313493,314679..314811,315526..315809,315885..316048,316550..316705,316789..317014,317413..317993,318084..318219,318301..318360,318447..318609,318749..318823,318963..319177,320109..320363,320449..320640,320746..320811,320903..320964,321054..321264,321348..321449,321612..321720,322131..322191,322284..322541,322758..322943,323454..323636,323952..324515,325020..325157,327778..327814))
location: region:310702-327814:-1
so has part: feature:327778-327814:-1:exon
so has part: feature:325020-325157:-1:exon
so has part: feature:323952-324515:-1:exon
so has part: feature:323454-323636:-1:exon
so has part: feature:322758-322943:-1:exon
so has part: feature:322284-322541:-1:exon
so has part: feature:322131-322191:-1:exon
so has part: feature:321612-321720:-1:exon
so has part: feature:321348-321449:-1:exon
so has part: feature:321054-321264:-1:exon
so has part: feature:320903-320964:-1:exon
so has part: feature:320746-320811:-1:exon
so has part: feature:320449-320640:-1:exon
so has part: feature:320109-320363:-1:exon
so has part: feature:318963-319177:-1:exon
so has part: feature:318749-318823:-1:exon
so has part: feature:318447-318609:-1:exon
so has part: feature:318301-318360:-1:exon
so has part: feature:318084-318219:-1:exon
so has part: feature:317413-317993:-1:exon
so has part: feature:316789-317014:-1:exon
so has part: feature:316550-316705:-1:exon
so has part: feature:315885-316048:-1:exon
so has part: feature:315526-315809:-1:exon
so has part: feature:314679-314811:-1:exon
so has part: feature:313347-313493:-1:exon
so has part: feature:311971-312197:-1:exon
so has part: feature:311742-311885:-1:exon
so has part: feature:310702-310965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327778-327814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325020-325157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323952-324515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323454-323636:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322758-322943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322284-322541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322131-322191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321612-321720:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321348-321449:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321054-321264:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320903-320964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320746-320811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320449-320640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320109-320363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318963-319177:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:318749-318823:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:318447-318609:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:318301-318360:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:318084-318219:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:317413-317993:-1:exon

position:317993:-1
position: 317993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:316789-317014:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:316550-316705:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:315885-316048:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:315526-315809:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:314679-314811:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:313347-313493:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:311971-312197:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:311742-311885:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:310702-310965:-1:exon

BAZ2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: BAZ2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain adjacent to zinc finger domain protein 2A isoform X2
translation: METNNHFNFTGLSSAPAASGPKPTPASGDSPFTHSSPLSFPLQGKSLNGGMNVNGFSTVSHPGTSGTFSPGSVPAGAQPLRAYDCLWDYAPYAPAGGLKDGGPPALGQFPLNGVAGGSRPASPGHGTNLRAAGQEFWGNGTAGPMGLNFDSQELYDSFHDQSFELMQNGPDGFYAAGQSSPILSSDTQPFPLAPDEPDPGQGDADGAAKEMPTTIAENGGGLVGSQELEEAQPDLKICSYNGAAAGAGSLGPEGPVLAPRDRGCLGDASPIAPRLEDTHILSEDPLEPFESLARDPGTGDLYTMDDSQLVGDKSSLEEPPDLTASPPLHAGPFSLLPASSSPAPLLDGPSSPPALHGDSVELNSGDHAGLRESGSLELDPPLEPESPAPSAEEEEEEEEEEEEEGEEEEEEEEAADSCPETSAVPEGEGESEETAPLSASGAGDVPRRRIATQEEVRFPLQHGWRREVRIKKGNHRWQGETWYYGPCGKRMKQFPEVIKYLSRNMVQDVRREHFSFSPRMPVGDFYEERDTPEGVQWVKLSPEEIPGRIQAITGKRGRPRNAEKAKPKEPPAAKRGRGRPPKVRMVDLLSKTDARLLKRLEAQEVLSDEDKLKMSKIKKKMRRKAKNKQKQEAKAPRAREAKKKSKAKEKKGKPEKGKDKARPKEKKGKGARKADKGLLAQRRLEERQRQQLILEEMKKPTEDMCLGDHQPLPAFSRIPGLVLPSRAFSDCLTVVEFLQSYGKVLGLEPVRDVPTLGALQEGLLGVAPGAGQLQDLLVRLLQAALCDPGLPPYCQSLKILGEKVSEISLNRDTVSEVLRCFLTAHGAGAELCEGLHTKPFQALPPERKAAILVFLVNELNSSALIISEIDKTLENMSNYRKNKWIIEGRLRRLKVALAKKTGRPESEITGLEEGRRRRSSRLTEDAGLEMEEEEETQGRKSRREEEADTSASSVPELERQIEKLAKRQMFFRKKLLHSSQTLRAASLGQDRFRRRYWVLPHLGGIFVEGAEAEAVAQEPPEEKVSPHVSPVKEEPAAVPVASRTSCPASASRARGRPRKSKEELAQHCGPCPAPVNGVLEEPEPLGQSQHDLSQSAFLSWLSQTQSSLLKDSVLTPASSPGKGDTGLLPPEAPSDPMEEEEEEEEEESAPEAVAKRGPWFNLLPRTPCDDRAPLATSSAEPSPRAPAAPRSQSWGEPPKGSARQLNGLPADDPTAPLLASTPVHAGPRAHGACPRSRGSLEKLQDVPGQPKRRGRPPTKFFKQMEQKYLTQLTEQPVPAEMQSGWWWLRDPEELEAVARALHPRGIREKALHKHLTKHKEFLREVCLRSTTDPIFHPRPESATATVSQEALAQWSVPDRAYETDLGVLQWVEELEQRVLMADLQIRGWTCPSPDSTRDDLRYCEHKVEPLEDITVRSRRDGLPLRRELTNPLDLAVLRLAALEQNLERRYLKEPLWPLHEVVVEKAVLSGPEELSLGPTEIAYEITPRVRTWRQTLERCRSAAQVSLCIFQLEKSIAWEKSVNRVTCLVCRRGDDDEHLLLCDGCDRGCHLYCHRPRMTEVPEGDWFCSVCVARAGQYRDPVSPRRGKKRKRGRAVAGSPGEEEPSPRRRPAPRRREGLPVPRCPGEALAPPRRRSSALRGQPSDLTFCEIILMEMESHEDAWPFLEPVNPRLVPGYRKIIKNPMDFATMRTRLLRGGYSSSAEFAADALLVFDNCQTFNEDDSAVGRAGHAMRRFFQSRWEEFYQGKHAPNP
SIO_010081: BAZ2A
subclass of: SO_0000673
so part of: BAZ2A
location: complement(join(310797..310965,311742..311885,311971..312197,313347..313493,314679..314811,315526..315809,315885..316048,316550..316705,316789..317014,317413..317990,318084..318219,318301..318360,318447..318609,318749..318823,318963..319177,320109..320363,320449..320640,320746..320811,320903..320964,321054..321264,321348..321449,321612..321720,322131..322191,322284..322541,322758..322943,323454..323636,323952..324515,325020..325155))
location: region:310797-325155:-1
so has part: feature:325020-325155:-1:exon
so has part: feature:323952-324515:-1:exon
so has part: feature:323454-323636:-1:exon
so has part: feature:322758-322943:-1:exon
so has part: feature:322284-322541:-1:exon
so has part: feature:322131-322191:-1:exon
so has part: feature:321612-321720:-1:exon
so has part: feature:321348-321449:-1:exon
so has part: feature:321054-321264:-1:exon
so has part: feature:320903-320964:-1:exon
so has part: feature:320746-320811:-1:exon
so has part: feature:320449-320640:-1:exon
so has part: feature:320109-320363:-1:exon
so has part: feature:318963-319177:-1:exon
so has part: feature:318749-318823:-1:exon
so has part: feature:318447-318609:-1:exon
so has part: feature:318301-318360:-1:exon
so has part: feature:318084-318219:-1:exon
so has part: feature:317413-317990:-1:exon
so has part: feature:316789-317014:-1:exon
so has part: feature:316550-316705:-1:exon
so has part: feature:315885-316048:-1:exon
so has part: feature:315526-315809:-1:exon
so has part: feature:314679-314811:-1:exon
so has part: feature:313347-313493:-1:exon
so has part: feature:311971-312197:-1:exon
so has part: feature:311742-311885:-1:exon
so has part: feature:310797-310965:-1:exon

XP_031950087.1
type: Protein
SIO_000068: ncbiprotein

position:310797:-1
position: 310797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325155:-1
position: 325155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325020-325155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323952-324515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323454-323636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322758-322943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322284-322541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322131-322191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321612-321720:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321348-321449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321054-321264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:320903-320964:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320746-320811:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320449-320640:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320109-320363:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318963-319177:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318749-318823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:318447-318609:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:318301-318360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:318084-318219:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:317413-317990:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316789-317014:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:316550-316705:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:315885-316048:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:315526-315809:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:314679-314811:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:313347-313493:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:311971-312197:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:311742-311885:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:310797-310965:-1:exon

BAZ2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: BAZ2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain adjacent to zinc finger domain protein 2A isoform X1
translation: METNNHFNFTGLSSAPAASGPKPTPASGDSPFTHSSPLSFPLQGKSLNGGMNVNGFSTVSHPGTSGTFSPGSVPAGAQPLRAYDCLWDYAPYAPAGGLKDGGPPALGQFPLNGVAGGSRPASPGHGTNLRAAGQEFWGNGTAGPMGLNFDSQELYDSFHDQSFELMQNGPDGFYAAGQSSPILSSDTQPFPLAPDEPDPGQGDADGAAKEMPTTIAENGGGLVGSQELEEAQPDLKICSYNGAAAGAGSLGPEGPVLAPRDRGCLGDASPIAPRLEDTHILSEDPLEPFESLARDPGTGDLYTMDDSQLVGDKSSLEEPPDLTASPPLHAGPFSLLPASSSPAPLLDGPSSPPALHGDSVELNSGDHAGLRESGSLELDPPLEPESPAPSAEEEEEEEEEEEEEGEEEEEEEEAADSCPETSAVPEGEGESEETAPLSASGAGDVPRRRIATQEEVRFPLQHGWRREVRIKKGNHRWQGETWYYGPCGKRMKQFPEVIKYLSRNMVQDVRREHFSFSPRMPVGDFYEERDTPEGVQWVKLSPEEIPGRIQAITGKRGRPRNAEKAKPKEPPAAKRGRGRPPKVRMVDLLSKTDARLLKRLEAQEVLSDEDKLKMSKIKKKMRRKAKNKQKQEAKAPRAREAKKKSKAKEKKGKPEKGKDKARPKEKKGKGARKADKGLLAQRRLEERQRQQLILEEMKKPTEDMCLGDHQPLPAFSRIPGLVLPSRAFSDCLTVVEFLQSYGKVLGLEPVRDVPTLGALQEGLLGVAPGAGQLQDLLVRLLQAALCDPGLPPYCQSLKILGEKVSEISLNRDTVSEVLRCFLTAHGAGAELCEGLHTKPFQALPPERKAAILVFLVNELNSSALIISEIDKTLENMSNYRKNKWIIEGRLRRLKVALAKKTGRPESEITGLEEGRRRRSSRLTEDAGLEMEEEEETQGRKSRREEEADTSASSVPELERQIEKLAKRQMFFRKKLLHSSQTLRAASLGQDRFRRRYWVLPHLGGIFVEGAEAAEAVAQEPPEEKVSPHVSPVKEEPAAVPVASRTSCPASASRARGRPRKSKEELAQHCGPCPAPVNGVLEEPEPLGQSQHDLSQSAFLSWLSQTQSSLLKDSVLTPASSPGKGDTGLLPPEAPSDPMEEEEEEEEEESAPEAVAKRGPWFNLLPRTPCDDRAPLATSSAEPSPRAPAAPRSQSWGEPPKGSARQLNGLPADDPTAPLLASTPVHAGPRAHGACPRSRGSLEKLQDVPGQPKRRGRPPTKFFKQMEQKYLTQLTEQPVPAEMQSGWWWLRDPEELEAVARALHPRGIREKALHKHLTKHKEFLREVCLRSTTDPIFHPRPESATATVSQEALAQWSVPDRAYETDLGVLQWVEELEQRVLMADLQIRGWTCPSPDSTRDDLRYCEHKVEPLEDITVRSRRDGLPLRRELTNPLDLAVLRLAALEQNLERRYLKEPLWPLHEVVVEKAVLSGPEELSLGPTEIAYEITPRVRTWRQTLERCRSAAQVSLCIFQLEKSIAWEKSVNRVTCLVCRRGDDDEHLLLCDGCDRGCHLYCHRPRMTEVPEGDWFCSVCVARAGQYRDPVSPRRGKKRKRGRAVAGSPGEEEPSPRRRPAPRRREGLPVPRCPGEALAPPRRRSSALRGQPSDLTFCEIILMEMESHEDAWPFLEPVNPRLVPGYRKIIKNPMDFATMRTRLLRGGYSSSAEFAADALLVFDNCQTFNEDDSAVGRAGHAMRRFFQSRWEEFYQGKHAPNP
SIO_010081: BAZ2A
subclass of: SO_0000673
so part of: BAZ2A
location: complement(join(310797..310965,311742..311885,311971..312197,313347..313493,314679..314811,315526..315809,315885..316048,316550..316705,316789..317014,317413..317993,318084..318219,318301..318360,318447..318609,318749..318823,318963..319177,320109..320363,320449..320640,320746..320811,320903..320964,321054..321264,321348..321449,321612..321720,322131..322191,322284..322541,322758..322943,323454..323636,323952..324515,325020..325155))
location: region:310797-325155:-1
so has part: feature:325020-325155:-1:exon
so has part: feature:323952-324515:-1:exon
so has part: feature:323454-323636:-1:exon
so has part: feature:322758-322943:-1:exon
so has part: feature:322284-322541:-1:exon
so has part: feature:322131-322191:-1:exon
so has part: feature:321612-321720:-1:exon
so has part: feature:321348-321449:-1:exon
so has part: feature:321054-321264:-1:exon
so has part: feature:320903-320964:-1:exon
so has part: feature:320746-320811:-1:exon
so has part: feature:320449-320640:-1:exon
so has part: feature:320109-320363:-1:exon
so has part: feature:318963-319177:-1:exon
so has part: feature:318749-318823:-1:exon
so has part: feature:318447-318609:-1:exon
so has part: feature:318301-318360:-1:exon
so has part: feature:318084-318219:-1:exon
so has part: feature:317413-317993:-1:exon
so has part: feature:316789-317014:-1:exon
so has part: feature:316550-316705:-1:exon
so has part: feature:315885-316048:-1:exon
so has part: feature:315526-315809:-1:exon
so has part: feature:314679-314811:-1:exon
so has part: feature:313347-313493:-1:exon
so has part: feature:311971-312197:-1:exon
so has part: feature:311742-311885:-1:exon
so has part: feature:310797-310965:-1:exon

XP_031950086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325020-325155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323952-324515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323454-323636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322758-322943:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322284-322541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322131-322191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321612-321720:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321348-321449:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321054-321264:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:320903-320964:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:320746-320811:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:320449-320640:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320109-320363:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318963-319177:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318749-318823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:318447-318609:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:318301-318360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:318084-318219:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:317413-317993:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:316789-317014:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:316550-316705:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:315885-316048:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:315526-315809:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:314679-314811:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:313347-313493:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:311971-312197:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:311742-311885:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:310797-310965:-1:exon

ATP5F1B
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ATP5F1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(329697..333138)
location: region:329697-333138:-1
so has part: feature:329697-333138:-1:exon
subclass of: SO_0000010

116436828
type: Gene
SIO_000068: ncbigene

position:329697:-1
position: 329697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333138:-1
position: 333138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329697-333138:-1:exon

ATP5F1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP5F1B
product: ATP synthase F1 subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032094239.1
SIO_010081: ATP5F1B
subclass of: SO_0000673
so part of: ATP5F1B
location: complement(join(329697..329880,329957..330158,330246..330458,330542..330664,330739..330897,331005..331189,331431..331552,331691..331865,332184..332366,332969..333138))
location: region:329697-333138:-1
so has part: feature:332969-333138:-1:exon
so has part: feature:332184-332366:-1:exon
so has part: feature:331691-331865:-1:exon
so has part: feature:331431-331552:-1:exon
so has part: feature:331005-331189:-1:exon
so has part: feature:330739-330897:-1:exon
so has part: feature:330542-330664:-1:exon
so has part: feature:330246-330458:-1:exon
so has part: feature:329957-330158:-1:exon
so has part: feature:329697-329880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332969-333138:-1:exon

position:332969:-1
position: 332969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:332184-332366:-1:exon

position:332184:-1
position: 332184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332366:-1
position: 332366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:331691-331865:-1:exon

position:331691:-1
position: 331691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331865:-1
position: 331865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:331431-331552:-1:exon

position:331431:-1
position: 331431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331552:-1
position: 331552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:331005-331189:-1:exon

position:331005:-1
position: 331005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331189:-1
position: 331189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330739-330897:-1:exon

position:330739:-1
position: 330739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330897:-1
position: 330897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:330542-330664:-1:exon

position:330542:-1
position: 330542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330664:-1
position: 330664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:330246-330458:-1:exon

position:330246:-1
position: 330246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330458:-1
position: 330458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:329957-330158:-1:exon

position:329957:-1
position: 329957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330158:-1
position: 330158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:329697-329880:-1:exon

position:329880:-1
position: 329880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5F1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP5F1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit beta, mitochondrial
translation: MLGLAGRAAAAAAAAARPLLPRGATPGRDLLPLLLGRGAAPAAAAVGARRDYAAQAAPAAKAGSTTGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTRKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGPEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFKQILAGEYDHLPEQAFYMVGPIEEAVAKAEKLAEEHA
SIO_010081: ATP5F1B
subclass of: SO_0000673
so part of: ATP5F1B
location: complement(join(329783..329880,329957..330158,330246..330458,330542..330664,330739..330897,331005..331189,331431..331552,331691..331865,332184..332366,332969..333113))
location: region:329783-333113:-1
so has part: feature:332969-333113:-1:exon
so has part: feature:332184-332366:-1:exon
so has part: feature:331691-331865:-1:exon
so has part: feature:331431-331552:-1:exon
so has part: feature:331005-331189:-1:exon
so has part: feature:330739-330897:-1:exon
so has part: feature:330542-330664:-1:exon
so has part: feature:330246-330458:-1:exon
so has part: feature:329957-330158:-1:exon
so has part: feature:329783-329880:-1:exon

XP_031950130.1
type: Protein
SIO_000068: ncbiprotein

position:329783:-1
position: 329783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333113:-1
position: 333113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332969-333113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:332184-332366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:331691-331865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331431-331552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331005-331189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330739-330897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330542-330664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330246-330458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:329957-330158:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329783-329880:-1:exon

LOC116436853
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436853
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(331267..331341)
location: region:331267-331341:-1
so has part: feature:331267-331341:-1:exon
subclass of: SO_0000578

116436853
type: Gene
SIO_000068: ncbigene

position:331267:-1
position: 331267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331341:-1
position: 331341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331267-331341:-1:exon

LOC116436853
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: snoRNA
gene: LOC116436853
product: small nucleolar RNA SNORD59
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00273
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004237087.1
SIO_010081: LOC116436853
subclass of: SO_0000673
so part of: LOC116436853
location: complement(331267..331341)
location: region:331267-331341:-1
so has part: feature:331267-331341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331267-331341:-1:exon

LOC116436854
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436854
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(332070..332143)
location: region:332070-332143:-1
so has part: feature:332070-332143:-1:exon
subclass of: SO_0000578

116436854
type: Gene
SIO_000068: ncbigene

position:332070:-1
position: 332070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332143:-1
position: 332143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332070-332143:-1:exon

LOC116436854
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: snoRNA
gene: LOC116436854
product: small nucleolar RNA SNORD59
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00273
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004237088.1
SIO_010081: LOC116436854
subclass of: SO_0000673
so part of: LOC116436854
location: complement(332070..332143)
location: region:332070-332143:-1
so has part: feature:332070-332143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332070-332143:-1:exon

PTGES3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PTGES3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(333979..342293)
location: region:333979-342293:-1
so has part: feature:333979-342293:-1:exon
subclass of: SO_0000010

116436694
type: Gene
SIO_000068: ncbigene

position:333979:-1
position: 333979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342293:-1
position: 342293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333979-342293:-1:exon

PTGES3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PTGES3
product: prostaglandin E synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 138 samples with support for all annotated introns
transcript id: XM_032093983.1
SIO_010081: PTGES3
subclass of: SO_0000673
so part of: PTGES3
location: complement(join(333979..334873,335307..335331,335731..335793,336002..336091,336297..336395,336829..336898,336991..337104,342033..342293))
location: region:333979-342293:-1
so has part: feature:342033-342293:-1:exon
so has part: feature:336991-337104:-1:exon
so has part: feature:336829-336898:-1:exon
so has part: feature:336297-336395:-1:exon
so has part: feature:336002-336091:-1:exon
so has part: feature:335731-335793:-1:exon
so has part: feature:335307-335331:-1:exon
so has part: feature:333979-334873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:342033-342293:-1:exon

position:342033:-1
position: 342033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336991-337104:-1:exon

position:336991:-1
position: 336991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337104:-1
position: 337104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:336829-336898:-1:exon

position:336829:-1
position: 336829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336898:-1
position: 336898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:336297-336395:-1:exon

position:336297:-1
position: 336297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336395:-1
position: 336395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:336002-336091:-1:exon

position:336002:-1
position: 336002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336091:-1
position: 336091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:335731-335793:-1:exon

position:335731:-1
position: 335731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335793:-1
position: 335793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:335307-335331:-1:exon

position:335307:-1
position: 335307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335331:-1
position: 335331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:333979-334873:-1:exon

position:334873:-1
position: 334873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTGES3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PTGES3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin E synthase 3
translation: MQPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFNNIDPNESKHKRTDRSILCCLRKGESGQAWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDDDVDLPEVDGADDDSPDSDDEKMPDLE
SIO_010081: PTGES3
subclass of: SO_0000673
so part of: PTGES3
location: complement(join(334854..334873,335307..335331,335731..335793,336002..336091,336297..336395,336829..336898,336991..337104,342033..342034))
location: region:334854-342034:-1
so has part: feature:342033-342034:-1:exon
so has part: feature:336991-337104:-1:exon
so has part: feature:336829-336898:-1:exon
so has part: feature:336297-336395:-1:exon
so has part: feature:336002-336091:-1:exon
so has part: feature:335731-335793:-1:exon
so has part: feature:335307-335331:-1:exon
so has part: feature:334854-334873:-1:exon

XP_031949874.1
type: Protein
SIO_000068: ncbiprotein

position:334854:-1
position: 334854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342034:-1
position: 342034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342033-342034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336991-337104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:336829-336898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336297-336395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336002-336091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:335731-335793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335307-335331:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:334854-334873:-1:exon

NACA
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: NACA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(343440..353387)
location: region:343440-353387:-1
so has part: feature:343440-353387:-1:exon
subclass of: SO_0000010

116436629
type: Gene
SIO_000068: ncbigene

position:343440:-1
position: 343440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353387:-1
position: 353387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343440-353387:-1:exon

NACA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NACA
product: nascent polypeptide associated complex subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032093864.1
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(343440..343567,343656..343778,343991..344119,344257..344403,344656..344733,344835..344920,346009..346849,347099..347578,347639..349833,352829..352900,353276..353387))
location: region:343440-353387:-1
so has part: feature:353276-353387:-1:exon
so has part: feature:352829-352900:-1:exon
so has part: feature:347639-349833:-1:exon
so has part: feature:347099-347578:-1:exon
so has part: feature:346009-346849:-1:exon
so has part: feature:344835-344920:-1:exon
so has part: feature:344656-344733:-1:exon
so has part: feature:344257-344403:-1:exon
so has part: feature:343991-344119:-1:exon
so has part: feature:343656-343778:-1:exon
so has part: feature:343440-343567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353276-353387:-1:exon

position:353276:-1
position: 353276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:352829-352900:-1:exon

position:352829:-1
position: 352829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352900:-1
position: 352900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347639-349833:-1:exon

position:347639:-1
position: 347639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349833:-1
position: 349833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:347099-347578:-1:exon

position:347099:-1
position: 347099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347578:-1
position: 347578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:346009-346849:-1:exon

position:346009:-1
position: 346009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346849:-1
position: 346849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:344835-344920:-1:exon

position:344835:-1
position: 344835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344920:-1
position: 344920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:344656-344733:-1:exon

position:344656:-1
position: 344656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344733:-1
position: 344733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:344257-344403:-1:exon

position:344257:-1
position: 344257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344403:-1
position: 344403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:343991-344119:-1:exon

position:343991:-1
position: 343991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344119:-1
position: 344119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:343656-343778:-1:exon

position:343656:-1
position: 343656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343778:-1
position: 343778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:343440-343567:-1:exon

position:343567:-1
position: 343567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NACA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NACA
product: nascent polypeptide associated complex subunit alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032093866.1
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(343440..343567,343656..343778,343991..344119,344257..344403,344656..344733,344835..344920,346009..346630,347135..349833,352829..352900,353276..353387))
location: region:343440-353387:-1
so has part: feature:353276-353387:-1:exon
so has part: feature:352829-352900:-1:exon
so has part: feature:347135-349833:-1:exon
so has part: feature:346009-346630:-1:exon
so has part: feature:344835-344920:-1:exon
so has part: feature:344656-344733:-1:exon
so has part: feature:344257-344403:-1:exon
so has part: feature:343991-344119:-1:exon
so has part: feature:343656-343778:-1:exon
so has part: feature:343440-343567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353276-353387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352829-352900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347135-349833:-1:exon

position:347135:-1
position: 347135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:346009-346630:-1:exon

position:346630:-1
position: 346630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:344835-344920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344656-344733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344257-344403:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343991-344119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343656-343778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343440-343567:-1:exon

NACA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NACA
product: nascent polypeptide associated complex subunit alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032093865.1
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(343440..343567,343656..343778,343991..344119,344257..344403,344656..344733,344835..344920,346009..346474,346595..346849,347099..349833,352829..352900,353276..353387))
location: region:343440-353387:-1
so has part: feature:353276-353387:-1:exon
so has part: feature:352829-352900:-1:exon
so has part: feature:347099-349833:-1:exon
so has part: feature:346595-346849:-1:exon
so has part: feature:346009-346474:-1:exon
so has part: feature:344835-344920:-1:exon
so has part: feature:344656-344733:-1:exon
so has part: feature:344257-344403:-1:exon
so has part: feature:343991-344119:-1:exon
so has part: feature:343656-343778:-1:exon
so has part: feature:343440-343567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353276-353387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352829-352900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347099-349833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346595-346849:-1:exon

position:346595:-1
position: 346595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:346009-346474:-1:exon

position:346474:-1
position: 346474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:344835-344920:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344656-344733:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344257-344403:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343991-344119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343656-343778:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343440-343567:-1:exon

NACA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NACA
product: nascent polypeptide associated complex subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032093863.1
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(343440..343567,343656..343778,343991..344119,344257..344403,344656..344733,344835..344920,346009..346849,347099..349833,352829..352900,353276..353387))
location: region:343440-353387:-1
so has part: feature:353276-353387:-1:exon
so has part: feature:352829-352900:-1:exon
so has part: feature:347099-349833:-1:exon
so has part: feature:346009-346849:-1:exon
so has part: feature:344835-344920:-1:exon
so has part: feature:344656-344733:-1:exon
so has part: feature:344257-344403:-1:exon
so has part: feature:343991-344119:-1:exon
so has part: feature:343656-343778:-1:exon
so has part: feature:343440-343567:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353276-353387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352829-352900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347099-349833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346009-346849:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344835-344920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344656-344733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344257-344403:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343991-344119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343656-343778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343440-343567:-1:exon

NACA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NACA
product: nascent polypeptide associated complex subunit alpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 141 samples with support for all annotated introns
transcript id: XM_032093867.1
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(343440..343567,343656..343778,343991..344119,344257..344403,344656..344733,344835..344920,352829..352900,353276..353380))
location: region:343440-353380:-1
so has part: feature:353276-353380:-1:exon
so has part: feature:352829-352900:-1:exon
so has part: feature:344835-344920:-1:exon
so has part: feature:344656-344733:-1:exon
so has part: feature:344257-344403:-1:exon
so has part: feature:343991-344119:-1:exon
so has part: feature:343656-343778:-1:exon
so has part: feature:343440-343567:-1:exon

position:353380:-1
position: 353380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353276-353380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352829-352900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344835-344920:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344656-344733:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344257-344403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343991-344119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343656-343778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343440-343567:-1:exon

NACA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NACA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha isoform X5
translation: MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEPVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(343553..343567,343656..343778,343991..344119,344257..344403,344656..344733,344835..344920,352829..352898))
location: region:343553-352898:-1
so has part: feature:352829-352898:-1:exon
so has part: feature:344835-344920:-1:exon
so has part: feature:344656-344733:-1:exon
so has part: feature:344257-344403:-1:exon
so has part: feature:343991-344119:-1:exon
so has part: feature:343656-343778:-1:exon
so has part: feature:343553-343567:-1:exon

XP_031949758.1
type: Protein
SIO_000068: ncbiprotein

position:343553:-1
position: 343553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352898:-1
position: 352898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352829-352898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344835-344920:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344656-344733:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344257-344403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343991-344119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:343656-343778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343553-343567:-1:exon

NACA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NACA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha isoform X2
translation: MPGEATETVPATEQELPQPQAETAVLHAAHSPPLTPSPSAQALPVQPPSAATALPGPPGPVSPPMVPAAAIPVFSVPPQPPAPALPGPVTAAPPPAPHSPVAFAAPGSPGPAPVSPVSPGLPAPVSPGLAAASAAVTAAPLAPPVSPSSLPAALTSPMKAAPAAASVGAAPLAPLPACGAAPAPLPAAGAAPAPFPASGTAPSPLLPPPSRPLLASPPPVSPSLLPAPTMAVCPQSPGSPPLPTVPVSPGIPASTPLPSVPASPQAPAPTQCPVLVGAISPPIFLAAPKAPLSPPIPLLPAGMSPGHPAAAPPGPAPGAPVSPLVPVAPSVAKACPVGPAPVVPAVGHPVPPSVARTSPGSPAPQAAPVAAAAPVAPALSTPALGAAVSVPGPPASPMLPAAAPVPAVPSASCPPVTPAMAAPATPPVAKPAPGSPVPAPAAPSVPVTPAVAAPATPPVPKPAPGSPVPAPAAPSVPVTPAVAAPATPPVAKTPPLSPITAPAAPSVPVTLAMAAPATPPVAKTPPLSPVTAPAVPSVPVTLPVAPLATPPVAKTSPAAPVTPAVAAPATPPVAKAAPMSPVTAPSAPVTLAMAAPPSPAVPPAAKDAPQGPIAAPAATPTPPSPAPATPPAAKAAPKSPVAAPPSPATPAPATPAPAAPPAAPPGAKTPSKSPAKATPAPAIPTEDKAPPKSPVKATPAPAIPTEDKAPPKSPVKATPAPASPGAAKKSPKGSPVTAPSVPVAPAPLAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPSEDKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPATPAAVKAPPENPVTATPAAPPAAKASPKSPVKATPAPAASADAKASPKSPVRATPAPVASADAKAPPKSPVKATPAPATPAEAKTPPAPAQVPPKSPVTATPAPAAPPAAKTPPKSPAKTTPAPSTPAAAKAPPKSPAKATPSPVASAEAKTPPKSPVKATPAPATPAEAKTPSKSPAEAKASPKSPVKGTPTPAAPAAAPATAPAAATGVPGAPTPTKADAGRPGSAPSAPPAKKQQPLPNNKVAKPATRLPQPKPPSKAPLGADDEDLPPLLPPEPPVLLELSPPAGVLAPPAPQPVLKNDKGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEPVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(343553..343567,343656..343778,343991..344119,344257..344403,344656..344733,344835..344920,346009..346849,347099..347578,347639..349833,352829..352898))
location: region:343553-352898:-1
so has part: feature:352829-352898:-1:exon
so has part: feature:347639-349833:-1:exon
so has part: feature:347099-347578:-1:exon
so has part: feature:346009-346849:-1:exon
so has part: feature:344835-344920:-1:exon
so has part: feature:344656-344733:-1:exon
so has part: feature:344257-344403:-1:exon
so has part: feature:343991-344119:-1:exon
so has part: feature:343656-343778:-1:exon
so has part: feature:343553-343567:-1:exon

XP_031949755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352829-352898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347639-349833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347099-347578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346009-346849:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344835-344920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344656-344733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344257-344403:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343991-344119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343656-343778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343553-343567:-1:exon

NACA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NACA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha isoform X4
translation: MPGEATETVPATEQELPQPQAETAVLHAAHSPPLTPSPSAQALPVQPPSAATALPGPPGPVSPPMVPAAAIPVFSVPPQPPAPALPGPVTAAPPPAPHSPVAFAAPGSPGPAPVSPVSPGLPAPVSPGLAAASAAVTAAPLAPPVSPSSLPAALTSPMKAAPAAASVGAAPLAPLPACGAAPAPLPAAGAAPAPFPASGTAPSPLLPPPSRPLLASPPPVSPSLLPAPTMAVCPQSPGSPPLPTVPVSPGIPASTPLPSVPASPQAPAPTQCPVLVGAISPPIFLAAPKAPLSPPIPLLPAGMSPGHPAAAPPGPAPGAPVSPLVPVAPSVAKACPVGPAPVVPAVGHPVPPSVARTSPGSPAPQAAPVAAAAPVAPALSTPALGAAVSVPGPPASPMLPAAAPVPAVPSASCPPVTPAMAAPATPPVAKPAPGSPVPAPAAPSVPVTPAVAAPATPPVPKPAPGSPVPAPAAPSVPVTPAVAAPATPPVAKTPPLSPITAPAAPSVPVTLAMAAPATPPVAKTPPLSPVTAPAVPSVPVTLPVAPLATPPVAKTSPAAPVTPAVAAPATPPVAKAAPMSPVTAPSAPVTLAMAAPPSPAVPPAAKDAPQGPIAAPAATPTPPSPAPATPPAAKAAPKSPVAAPPSPATPAPATPAPAAPPAAPPGAKTPSKSPAKATPAPAIPTEDKAPPKSPVKATPAPAIPTEDKAPPKSPVKATPAPASPGAAKKSPKGSPVTAPSVPVAPAPLAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPSEDKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPATPAAVKAPPENPVTATPAPAAPPAAKTPPKSPAKTTPAPSTPAAAKAPPKSPAKATPSPVASAEAKTPPKSPVKATPAPATPAEAKTPSKSPAEAKASPKSPVKGTPTPAAPAAAPATAPAAATGVPGAPTPTKADAGRPGSAPSAPPAKKQQPLPNNKVAKPATRLPQPKPPSKAPLGADDEDLPPLLPPEPPVLLELSPPAGVLAPPAPQPVLKNDKGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEPVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(343553..343567,343656..343778,343991..344119,344257..344403,344656..344733,344835..344920,346009..346630,347135..349833,352829..352898))
location: region:343553-352898:-1
so has part: feature:352829-352898:-1:exon
so has part: feature:347135-349833:-1:exon
so has part: feature:346009-346630:-1:exon
so has part: feature:344835-344920:-1:exon
so has part: feature:344656-344733:-1:exon
so has part: feature:344257-344403:-1:exon
so has part: feature:343991-344119:-1:exon
so has part: feature:343656-343778:-1:exon
so has part: feature:343553-343567:-1:exon

XP_031949757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352829-352898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347135-349833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346009-346630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344835-344920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344656-344733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344257-344403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343991-344119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343656-343778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343553-343567:-1:exon

NACA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NACA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha isoform X3
translation: MPGEATETVPATEQELPQPQAETAVLHAAHSPPLTPSPSAQALPVQPPSAATALPGPPGPVSPPMVPAAAIPVFSVPPQPPAPALPGPVTAAPPPAPHSPVAFAAPGSPGPAPVSPVSPGLPAPVSPGLAAASAAVTAAPLAPPVSPSSLPAALTSPMKAAPAAASVGAAPLAPLPACGAAPAPLPAAGAAPAPFPASGTAPSPLLPPPSRPLLASPPPVSPSLLPAPTMAVCPQSPGSPPLPTVPVSPGIPASTPLPSVPASPQAPAPTQCPVLVGAISPPIFLAAPKAPLSPPIPLLPAGMSPGHPAAAPPGPAPGAPVSPLVPVAPSVAKACPVGPAPVVPAVGHPVPPSVARTSPGSPAPQAAPVAAAAPVAPALSTPALGAAVSVPGPPASPMLPAAAPVPAVPSASCPPVTPAMAAPATPPVAKPAPGSPVPAPAAPSVPVTPAVAAPATPPVPKPAPGSPVPAPAAPSVPVTPAVAAPATPPVAKTPPLSPITAPAAPSVPVTLAMAAPATPPVAKTPPLSPVTAPAVPSVPVTLPVAPLATPPVAKTSPAAPVTPAVAAPATPPVAKAAPMSPVTAPSAPVTLAMAAPPSPAVPPAAKDAPQGPIAAPAATPTPPSPAPATPPAAKAAPKSPVAAPPSPATPAPATPAPAAPPAAPPGAKTPSKSPAKATPAPAIPTEDKAPPKSPVKATPAPAIPTEDKAPPKSPVKATPAPASPGAAKKSPKGSPVTAPSVPVAPAPLAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPSEDKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPATPAAVKAPPENPVTATPAAPPAAKASPKSPVKATPAPAASADAKASPKSPVRATPAPVASADAKAPPKSPVKATPAPATPAEAKTPPAPAQVPPKSPVTATPAPAAPPAAKTPPKSPVKATPAPATPAEAKTPSKSPAEAKASPKSPVKGTPTPAAPAAAPATAPAAATGVPGAPTPTKADAGRPGSAPSAPPAKKQQPLPNNKVAKPATRLPQPKPPSKAPLGADDEDLPPLLPPEPPVLLELSPPAGVLAPPAPQPVLKNDKGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEPVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(343553..343567,343656..343778,343991..344119,344257..344403,344656..344733,344835..344920,346009..346474,346595..346849,347099..349833,352829..352898))
location: region:343553-352898:-1
so has part: feature:352829-352898:-1:exon
so has part: feature:347099-349833:-1:exon
so has part: feature:346595-346849:-1:exon
so has part: feature:346009-346474:-1:exon
so has part: feature:344835-344920:-1:exon
so has part: feature:344656-344733:-1:exon
so has part: feature:344257-344403:-1:exon
so has part: feature:343991-344119:-1:exon
so has part: feature:343656-343778:-1:exon
so has part: feature:343553-343567:-1:exon

XP_031949756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352829-352898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347099-349833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346595-346849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346009-346474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344835-344920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344656-344733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344257-344403:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343991-344119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343656-343778:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343553-343567:-1:exon

NACA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NACA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha isoform X1
translation: MPGEATETVPATEQELPQPQAETAVLHAAHSPPLTPSPSAQALPVQPPSAATALPGPPGPVSPPMVPAAAIPVFSVPPQPPAPALPGPVTAAPPPAPHSPVAFAAPGSPGPAPVSPVSPGLPAPVSPGLAAASAAVTAAPLAPPVSPSSLPAALTSPMKAAPAAASVGAAPLAPLPACGAAPAPLPAAGAAPAPFPASGTAPSPLLPPPSRPLLASPPPVSPSLLPAPTMAVCPQSPGSPPLPTVPVSPGIPASTPLPSVPASPQAPAPTQCPVLVGAISPPIFLAAPKAPLSPPIPLLPAGMSPGHPAAAPPGPAPGAPVSPLVPVAPSVAKACPVGPAPVVPAVGHPVPPSVARTSPGSPAPQAAPVAAAAPVAPALSTPALGAAVSVPGPPASPMLPAAAPVPAVPSASCPPVTPAMAAPATPPVAKPAPGSPVPAPAAPSVPVTPAVAAPATPPVPKPAPGSPVPAPAAPSVPVTPAVAAPATPPVAKTPPLSPITAPAAPSVPVTLAMAAPATPPVAKTPPLSPVTAPAVPSVPVTLPVAPLATPPVAKTSPAAPVTPAVAAPATPPVAKAAPMSPVTAPSAPVTLAMAAPPSPAVPPAAKDAPQGPIAAPAATPTPPSPAPATPPAAKAAPKSPVAAPPSPATPAPATPAPAAPPAAPPGAKTPSKSPAKATPAPAIPTEDKAPPKSPVKATPAPAIPTEDKAPPKSPVKATPAPASPGAAKKSPKGSPVTAPSVPVAPAPLAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPSEDKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPAAPAEAKAPPKSPVKATPAPATPAAVKAPPENPVTATPAAPPAAKASPKSPVKATPAPAASADAKASPKSPVRATPAPVASADAKAPPKSPVKATPAPATPAEAKTPPAPAQVPPKSPVTATPAPAAPPAAKTPPKSPAKTTPAPSTPAAAKAPPKSPAKATPSPVASAEAKTPPKSPVKATPAPATPAEAKTPSKSPAEAKASPKSPVKGTPTPAAPAAAPATAPAAATGVPGAPTPTKADAGRPGSAPSAPPAKKQQPLPNNKVAKPATRLPQPKPPSKAPLGADDEDLPPLLPPEPPVLLELSPPAGVLAPPAPQPVLKNDKGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEPVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(343553..343567,343656..343778,343991..344119,344257..344403,344656..344733,344835..344920,346009..346849,347099..349833,352829..352898))
location: region:343553-352898:-1
so has part: feature:352829-352898:-1:exon
so has part: feature:347099-349833:-1:exon
so has part: feature:346009-346849:-1:exon
so has part: feature:344835-344920:-1:exon
so has part: feature:344656-344733:-1:exon
so has part: feature:344257-344403:-1:exon
so has part: feature:343991-344119:-1:exon
so has part: feature:343656-343778:-1:exon
so has part: feature:343553-343567:-1:exon

XP_031949754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352829-352898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347099-349833:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346009-346849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344835-344920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:344656-344733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344257-344403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343991-344119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:343656-343778:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:343553-343567:-1:exon

PRIM1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PRIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(353998..358914)
location: region:353998-358914:-1
so has part: feature:353998-358914:-1:exon
subclass of: SO_0000010

116436656
type: Gene
SIO_000068: ncbigene

position:353998:-1
position: 353998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358914:-1
position: 358914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353998-358914:-1:exon

PRIM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PRIM1
product: DNA primase subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093930.1
SIO_010081: PRIM1
subclass of: SO_0000673
so part of: PRIM1
location: complement(join(353998..354199,354418..354516,355562..355647,355724..355793,355858..356094,357053..357162,357233..357291,357545..357681,357916..357989,358068..358174,358250..358404,358771..358914))
location: region:353998-358914:-1
so has part: feature:358771-358914:-1:exon
so has part: feature:358250-358404:-1:exon
so has part: feature:358068-358174:-1:exon
so has part: feature:357916-357989:-1:exon
so has part: feature:357545-357681:-1:exon
so has part: feature:357233-357291:-1:exon
so has part: feature:357053-357162:-1:exon
so has part: feature:355858-356094:-1:exon
so has part: feature:355724-355793:-1:exon
so has part: feature:355562-355647:-1:exon
so has part: feature:354418-354516:-1:exon
so has part: feature:353998-354199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358771-358914:-1:exon

position:358771:-1
position: 358771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358250-358404:-1:exon

position:358250:-1
position: 358250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358404:-1
position: 358404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:358068-358174:-1:exon

position:358068:-1
position: 358068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358174:-1
position: 358174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:357916-357989:-1:exon

position:357916:-1
position: 357916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357989:-1
position: 357989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:357545-357681:-1:exon

position:357545:-1
position: 357545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357681:-1
position: 357681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:357233-357291:-1:exon

position:357233:-1
position: 357233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357291:-1
position: 357291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:357053-357162:-1:exon

position:357053:-1
position: 357053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357162:-1
position: 357162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:355858-356094:-1:exon

position:355858:-1
position: 355858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356094:-1
position: 356094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:355724-355793:-1:exon

position:355724:-1
position: 355724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355793:-1
position: 355793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:355562-355647:-1:exon

position:355562:-1
position: 355562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355647:-1
position: 355647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:354418-354516:-1:exon

position:354418:-1
position: 354418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354516:-1
position: 354516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:353998-354199:-1:exon

position:354199:-1
position: 354199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRIM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PRIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA primase small subunit
translation: MARFEPAALPELLPVFYRRLFPHGPYGRWLSYGGVKNYFQLREFSFTLRDDVYLRFQSFGSPQELERELQKINPYKIDIGAVYSHRPNQHNTVHLGAFQPQEKELVFDIDMTDYDDVRTCCSSADICSKCWTLMTIAVRIIDRALVEDLGVQHRLWVYSGRRGVHCWVCDDAVRKWSPALRAAAVEYLSLVKGGADTVKKVNLSHPVHPFIRRSVGVVEKYFEEYALLGQDILGSPERWDKVLALIPEEYREPLQAEFPKKKDSVQRWELLRGRVERTRASGRGVALGPCYADWEVMLQFCFPRLDINVSKGLGHLLKSPFSVHPKTGRVSVPLDLHRLDQFDPFAVPTITSLCHELDTAGSDGEQEDVGETEPKRRARDYKKTSLAPYVRVFEQFVEGMESARRGERIRRSDLQGDF
SIO_010081: PRIM1
subclass of: SO_0000673
so part of: PRIM1
location: complement(join(354180..354199,354418..354516,355562..355647,355724..355793,355858..356094,357053..357162,357233..357291,357545..357681,357916..357989,358068..358174,358250..358404,358771..358873))
location: region:354180-358873:-1
so has part: feature:358771-358873:-1:exon
so has part: feature:358250-358404:-1:exon
so has part: feature:358068-358174:-1:exon
so has part: feature:357916-357989:-1:exon
so has part: feature:357545-357681:-1:exon
so has part: feature:357233-357291:-1:exon
so has part: feature:357053-357162:-1:exon
so has part: feature:355858-356094:-1:exon
so has part: feature:355724-355793:-1:exon
so has part: feature:355562-355647:-1:exon
so has part: feature:354418-354516:-1:exon
so has part: feature:354180-354199:-1:exon

XP_031949821.1
type: Protein
SIO_000068: ncbiprotein

position:354180:-1
position: 354180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358873:-1
position: 358873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358771-358873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358250-358404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358068-358174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357916-357989:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357545-357681:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357233-357291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357053-357162:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:355858-356094:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:355724-355793:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:355562-355647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:354418-354516:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354180-354199:-1:exon

LOC116436679
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 359667..364069
location: region:359667-364069:1
so has part: feature:359667-364069:1:exon
subclass of: SO_0000010

116436679
type: Gene
SIO_000068: ncbigene

position:359667:1
position: 359667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364069:1
position: 364069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359667-364069:1:exon

LOC116436679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436679
product: retinol dehydrogenase 16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 72 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032093964.1
SIO_010081: LOC116436679
subclass of: SO_0000673
so part of: LOC116436679
location: join(359667..359841,362297..362626,362760..363018,363586..363749,363827..364069)
location: region:359667-364069:1
so has part: feature:359667-359841:1:exon
so has part: feature:362297-362626:1:exon
so has part: feature:362760-363018:1:exon
so has part: feature:363586-363749:1:exon
so has part: feature:363827-364069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359667-359841:1:exon

position:359841:1
position: 359841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:362297-362626:1:exon

position:362297:1
position: 362297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362626:1
position: 362626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362760-363018:1:exon

position:362760:1
position: 362760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363018:1
position: 363018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:363586-363749:1:exon

position:363586:1
position: 363586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363749:1
position: 363749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:363827-364069:1:exon

position:363827:1
position: 363827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436680
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 359827..361728
location: region:359827-361728:1
so has part: feature:359827-361728:1:exon
subclass of: SO_0000010

116436680
type: Gene
SIO_000068: ncbigene

position:359827:1
position: 359827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361728:1
position: 361728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359827-361728:1:exon

LOC116436680
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436680
product: retinol dehydrogenase 16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_032093965.1
SIO_010081: LOC116436680
subclass of: SO_0000673
so part of: LOC116436680
location: join(359827..360172,360306..360564,360989..361152,361317..361728)
location: region:359827-361728:1
so has part: feature:359827-360172:1:exon
so has part: feature:360306-360564:1:exon
so has part: feature:360989-361152:1:exon
so has part: feature:361317-361728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359827-360172:1:exon

position:360172:1
position: 360172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360306-360564:1:exon

position:360306:1
position: 360306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360564:1
position: 360564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:360989-361152:1:exon

position:360989:1
position: 360989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361152:1
position: 361152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:361317-361728:1:exon

position:361317:1
position: 361317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 16-like
translation: MWLYVVAVLLGLFLLRRWHRERQTVPRLSEKHVLITGCDSGFGNLLARQLDARGLRVLAACLTEAGAAQLRAATSNRLQTVLLDVTSSKSIADVTAWVRERVGDRGLWGLVNNAGIAIPTAPNEWLTKEDFVKVLNVNLVGLVEVTLSLLPLVRRARGRVVNVASVMGRVSFFGGGYCISKYGVEAFSDSLRLEMSSFGVKVCVIEPGYFKTMITNTENLEKNFISSWQKLPEEIKASYGEGYLRQLVAMLKVMQKGYNSDLSLVTNCMEHALTSLHPRTRYSAGWDAKLLYIPLSYLPSALSDALFSLFCPKSFGKA
SIO_010081: LOC116436680
subclass of: SO_0000673
so part of: LOC116436680
location: join(359857..360172,360306..360564,360989..361152,361317..361534)
location: region:359857-361534:1
so has part: feature:359857-360172:1:exon
so has part: feature:360306-360564:1:exon
so has part: feature:360989-361152:1:exon
so has part: feature:361317-361534:1:exon

XP_031949856.1
type: Protein
SIO_000068: ncbiprotein

position:359857:1
position: 359857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361534:1
position: 361534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359857-360172:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360306-360564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:360989-361152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361317-361534:1:exon

LOC116436679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 16-like
translation: MWLYVVAVLLGLFLLRRWHRERQTVPRLSEKHVLITGCDSGFGNLLARQLDARGLRVLAACLTEAGAAQLRAATSNRLQTVLLDVTSSKSIADVTAWVRERVGDRGLWGLVNNAGIIIPTAPNEWLTKEDFVKVLNVNLVGLVEVTLSLLPLVRRARGRVVNVASVMGRVSFFGGGYCISKYGVEAFSDSLRRELRPFGVQVSIIEPGGFQTAIIDPAPLVEGFARLWERLPAEAQAAYGRHYVDKYAKTTTLLHRLSSSRLSHVTDAMTHALLSRCPRSRYAAGWDARLIFLPLSYCPAWLSDTILGLLLPIPASGVP
SIO_010081: LOC116436679
subclass of: SO_0000673
so part of: LOC116436679
location: join(362311..362626,362760..363018,363586..363749,363827..364047)
location: region:362311-364047:1
so has part: feature:362311-362626:1:exon
so has part: feature:362760-363018:1:exon
so has part: feature:363586-363749:1:exon
so has part: feature:363827-364047:1:exon

XP_031949855.1
type: Protein
SIO_000068: ncbiprotein

position:362311:1
position: 362311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364047:1
position: 364047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362311-362626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362760-363018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:363586-363749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363827-364047:1:exon

GPR182
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: GPR182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 364159..370119
location: region:364159-370119:1
so has part: feature:364159-370119:1:exon
subclass of: SO_0000010

116436670
type: Gene
SIO_000068: ncbigene

position:364159:1
position: 364159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370119:1
position: 370119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364159-370119:1:exon

GPR182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: GPR182
product: G protein-coupled receptor 182
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_032093947.1
SIO_010081: GPR182
subclass of: SO_0000673
so part of: GPR182
location: join(364159..366257,367346..370119)
location: region:364159-370119:1
so has part: feature:364159-366257:1:exon
so has part: feature:367346-370119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364159-366257:1:exon

position:366257:1
position: 366257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367346-370119:1:exon

position:367346:1
position: 367346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPR182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: GPR182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 182
translation: MAEVTSVPMETHTVRMETHTVPSEYGDYHNWSELFHLLNHTYTYCEFSLDENVKRVILFILYLVIFVVGLVENLLVIWVNWQTRGNKSLVNLYIINMAIADLGVLLSLPIWMLEVMLDYTWLWGSFLCRFTHYFYFANMYASIFFLTCLSVDRYVTLTSSSLFWRRHQHRARHVVCACSWVLAAAIPFLEVAHMQLVNTGEPICIFMAPFETYDEWALAVSLATTTIGFLIPFPIIAVFNVLTARFVRRTKPESRKHCLLIYAYIGVFLLSWLPFHVVLTLLTLEGNHIVLHCTFAHLLYFFYDIIDCFTLLHCVINPILYNFLSKNFRSKLISAVVKYIPKDHGGQKGADNSSSSTQHSIVIAKDNSPPN
SIO_010081: GPR182
subclass of: SO_0000673
so part of: GPR182
location: 367354..368469
location: region:367354-368469:1
so has part: feature:367354-368469:1:exon

XP_031949838.1
type: Protein
SIO_000068: ncbiprotein

position:367354:1
position: 367354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368469:1
position: 368469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367354-368469:1:exon

ZBTB39
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ZBTB39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(371413..378423)
location: region:371413-378423:-1
so has part: feature:371413-378423:-1:exon
subclass of: SO_0000010

116436641
type: Gene
SIO_000068: ncbigene

position:371413:-1
position: 371413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378423:-1
position: 378423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371413-378423:-1:exon

ZBTB39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZBTB39
product: zinc finger and BTB domain containing 39
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_032093895.1
SIO_010081: ZBTB39
subclass of: SO_0000673
so part of: ZBTB39
location: complement(join(371413..377030,378357..378423))
location: region:371413-378423:-1
so has part: feature:378357-378423:-1:exon
so has part: feature:371413-377030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378357-378423:-1:exon

position:378357:-1
position: 378357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:371413-377030:-1:exon

position:377030:-1
position: 377030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZBTB39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 39
translation: MGMRIKLHSTNHPNNLLKELNKCRLSETMCDVTILVGSRSFAAHKAVLACAAGYFQNLFLNTGLDAARTYVVDFITPANFEKILSFVYTSELFTDLINVGVIYEVAERLGMEDLLQACHSTFPDLESSAITKQPALAVGEGRAGPLSSTSSEQSHSLGDIRSGAEHFGPERNYLLHGDVAGSYKEDDRNPVGEASQALPLMHPQQPPKTEQESDPGQFAPVAGLGAQPGGNVVAQTTGSSCPQYKAQSNGDYGKGGFFPTDPSLDVSTGSNSCPSNSDHSKEQGFEQMDELQLEDLGEAELHFEDAGEELVPSEEVIELSDDSEEELAFESDGRDSKAMPCQVCKKVLEPNIQLIRQHARDHVDLLTGNCKVCETHFQDRNSRVTHVLSHIGIFLFSCDMCETKFFTQWQLTLHRRDGVFDNNIIVHPSDPLPGKAAVFGGGPSPELACAACGKPLAKDFHTVRNHLLEHVNLKSQTCGVCDQRHLSLCSLLWHTLSHLGISVFSCSVCASSFVDRQLLEKHLAVHQHAEEALFQCHFCSQSFKLEAAYRYHVSQHKCGGSLDIRAGFGERLQPQGLPKRKLPEEFLSEELALQSQPGNSKYSCKVCGKRFAHTSEFNYHRRIHTGEKPYQCKVCHKFFRGRSTIKCHLRTHSGALMYRCTVCGHYSSTLNLMSKHIGVHKGSLPPDFTIEQTFMYIIHSKEAEKNTDS
SIO_010081: ZBTB39
subclass of: SO_0000673
so part of: ZBTB39
location: complement(374791..376920)
location: region:374791-376920:-1
so has part: feature:374791-376920:-1:exon

XP_031949786.1
type: Protein
SIO_000068: ncbiprotein

position:374791:-1
position: 374791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376920:-1
position: 376920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374791-376920:-1:exon

TAC3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(379095..380930)
location: region:379095-380930:-1
so has part: feature:379095-380930:-1:exon
subclass of: SO_0000010

116436697
type: Gene
SIO_000068: ncbigene

position:379095:-1
position: 379095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380930:-1
position: 380930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379095-380930:-1:exon

TAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TAC3
product: tachykinin precursor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093986.1
SIO_010081: TAC3
subclass of: SO_0000673
so part of: TAC3
location: complement(join(379095..379571,379638..379661,379737..379836,379931..380153,380706..380930))
location: region:379095-380930:-1
so has part: feature:380706-380930:-1:exon
so has part: feature:379931-380153:-1:exon
so has part: feature:379737-379836:-1:exon
so has part: feature:379638-379661:-1:exon
so has part: feature:379095-379571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380706-380930:-1:exon

position:380706:-1
position: 380706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:379931-380153:-1:exon

position:379931:-1
position: 379931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380153:-1
position: 380153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:379737-379836:-1:exon

position:379737:-1
position: 379737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379836:-1
position: 379836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:379638-379661:-1:exon

position:379638:-1
position: 379638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379661:-1
position: 379661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:379095-379571:-1:exon

position:379571:-1
position: 379571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tachykinin-3
translation: MKNRPVLAVLLFLALPLALARRAPAAAPPGPAPLAQGMPVPELLPWSVRGSPGAAAAAAALELLREEGAGPPAAPQKRDMHDFFVGLMGKRAAEPGRATGRGSGGPAPRCSPGPPAPGEAPLRAA
SIO_010081: TAC3
subclass of: SO_0000673
so part of: TAC3
location: complement(join(379426..379571,379638..379661,379737..379836,379931..380038))
location: region:379426-380038:-1
so has part: feature:379931-380038:-1:exon
so has part: feature:379737-379836:-1:exon
so has part: feature:379638-379661:-1:exon
so has part: feature:379426-379571:-1:exon

XP_031949877.1
type: Protein
SIO_000068: ncbiprotein

position:379426:-1
position: 379426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380038:-1
position: 380038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379931-380038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379737-379836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379638-379661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379426-379571:-1:exon

MYO1A
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: MYO1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(382804..392358)
location: region:382804-392358:-1
so has part: feature:382804-392358:-1:exon
subclass of: SO_0000010

116436633
type: Gene
SIO_000068: ncbigene

position:382804:-1
position: 382804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392358:-1
position: 392358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382804-392358:-1:exon

MYO1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MYO1A
product: myosin IA, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032093873.1
SIO_010081: MYO1A
subclass of: SO_0000673
so part of: MYO1A
location: complement(join(382804..383083,383532..383659,383731..383883,383985..384117,384185..384291,384393..384527,384636..384710,385281..385349,385445..385594,385730..385823,385903..386103,386184..386410,387337..387537,387645..387707,387959..388063,388176..388241,388325..388411,388495..388613,388701..388848,388931..389034,389129..389227,389298..389361,389509..389555,389659..389763,389878..389972,390164..390279,390912..391055,391901..392358))
location: region:382804-392358:-1
so has part: feature:391901-392358:-1:exon
so has part: feature:390912-391055:-1:exon
so has part: feature:390164-390279:-1:exon
so has part: feature:389878-389972:-1:exon
so has part: feature:389659-389763:-1:exon
so has part: feature:389509-389555:-1:exon
so has part: feature:389298-389361:-1:exon
so has part: feature:389129-389227:-1:exon
so has part: feature:388931-389034:-1:exon
so has part: feature:388701-388848:-1:exon
so has part: feature:388495-388613:-1:exon
so has part: feature:388325-388411:-1:exon
so has part: feature:388176-388241:-1:exon
so has part: feature:387959-388063:-1:exon
so has part: feature:387645-387707:-1:exon
so has part: feature:387337-387537:-1:exon
so has part: feature:386184-386410:-1:exon
so has part: feature:385903-386103:-1:exon
so has part: feature:385730-385823:-1:exon
so has part: feature:385445-385594:-1:exon
so has part: feature:385281-385349:-1:exon
so has part: feature:384636-384710:-1:exon
so has part: feature:384393-384527:-1:exon
so has part: feature:384185-384291:-1:exon
so has part: feature:383985-384117:-1:exon
so has part: feature:383731-383883:-1:exon
so has part: feature:383532-383659:-1:exon
so has part: feature:382804-383083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391901-392358:-1:exon

position:391901:-1
position: 391901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390912-391055:-1:exon

position:390912:-1
position: 390912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391055:-1
position: 391055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:390164-390279:-1:exon

position:390164:-1
position: 390164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390279:-1
position: 390279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:389878-389972:-1:exon

position:389878:-1
position: 389878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389972:-1
position: 389972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:389659-389763:-1:exon

position:389659:-1
position: 389659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389763:-1
position: 389763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:389509-389555:-1:exon

position:389509:-1
position: 389509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389555:-1
position: 389555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:389298-389361:-1:exon

position:389298:-1
position: 389298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389361:-1
position: 389361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:389129-389227:-1:exon

position:389129:-1
position: 389129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389227:-1
position: 389227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:388931-389034:-1:exon

position:388931:-1
position: 388931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389034:-1
position: 389034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:388701-388848:-1:exon

position:388701:-1
position: 388701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388848:-1
position: 388848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:388495-388613:-1:exon

position:388495:-1
position: 388495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388613:-1
position: 388613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:388325-388411:-1:exon

position:388325:-1
position: 388325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388411:-1
position: 388411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:388176-388241:-1:exon

position:388176:-1
position: 388176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388241:-1
position: 388241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:387959-388063:-1:exon

position:387959:-1
position: 387959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388063:-1
position: 388063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:387645-387707:-1:exon

position:387645:-1
position: 387645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387707:-1
position: 387707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:387337-387537:-1:exon

position:387337:-1
position: 387337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387537:-1
position: 387537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:386184-386410:-1:exon

position:386184:-1
position: 386184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386410:-1
position: 386410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:385903-386103:-1:exon

position:385903:-1
position: 385903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386103:-1
position: 386103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:385730-385823:-1:exon

position:385730:-1
position: 385730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385823:-1
position: 385823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:385445-385594:-1:exon

position:385445:-1
position: 385445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385594:-1
position: 385594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:385281-385349:-1:exon

position:385281:-1
position: 385281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385349:-1
position: 385349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:384636-384710:-1:exon

position:384636:-1
position: 384636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384710:-1
position: 384710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:384393-384527:-1:exon

position:384393:-1
position: 384393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384527:-1
position: 384527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:384185-384291:-1:exon

position:384185:-1
position: 384185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384291:-1
position: 384291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:383985-384117:-1:exon

position:383985:-1
position: 383985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384117:-1
position: 384117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:383731-383883:-1:exon

position:383731:-1
position: 383731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383883:-1
position: 383883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:383532-383659:-1:exon

position:383532:-1
position: 383532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383659:-1
position: 383659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:382804-383083:-1:exon

position:383083:-1
position: 383083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYO1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MYO1A
product: myosin IA, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_032093872.1
SIO_010081: MYO1A
subclass of: SO_0000673
so part of: MYO1A
location: complement(join(382804..383083,383532..383659,383731..383883,383985..384117,384185..384291,384393..384527,384636..384710,384934..385020,385281..385349,385445..385594,385730..385823,385903..386103,386184..386410,387337..387537,387645..387707,387959..388063,388176..388241,388325..388411,388495..388613,388701..388848,388931..389034,389129..389227,389298..389361,389509..389555,389659..389763,389878..389972,390164..390279,390912..391055,391901..392358))
location: region:382804-392358:-1
so has part: feature:391901-392358:-1:exon
so has part: feature:390912-391055:-1:exon
so has part: feature:390164-390279:-1:exon
so has part: feature:389878-389972:-1:exon
so has part: feature:389659-389763:-1:exon
so has part: feature:389509-389555:-1:exon
so has part: feature:389298-389361:-1:exon
so has part: feature:389129-389227:-1:exon
so has part: feature:388931-389034:-1:exon
so has part: feature:388701-388848:-1:exon
so has part: feature:388495-388613:-1:exon
so has part: feature:388325-388411:-1:exon
so has part: feature:388176-388241:-1:exon
so has part: feature:387959-388063:-1:exon
so has part: feature:387645-387707:-1:exon
so has part: feature:387337-387537:-1:exon
so has part: feature:386184-386410:-1:exon
so has part: feature:385903-386103:-1:exon
so has part: feature:385730-385823:-1:exon
so has part: feature:385445-385594:-1:exon
so has part: feature:385281-385349:-1:exon
so has part: feature:384934-385020:-1:exon
so has part: feature:384636-384710:-1:exon
so has part: feature:384393-384527:-1:exon
so has part: feature:384185-384291:-1:exon
so has part: feature:383985-384117:-1:exon
so has part: feature:383731-383883:-1:exon
so has part: feature:383532-383659:-1:exon
so has part: feature:382804-383083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:391901-392358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390912-391055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:390164-390279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389878-389972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389659-389763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389509-389555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389298-389361:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389129-389227:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388931-389034:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388701-388848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:388495-388613:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:388325-388411:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:388176-388241:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:387959-388063:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:387645-387707:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:387337-387537:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:386184-386410:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:385903-386103:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:385730-385823:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:385445-385594:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:385281-385349:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:384934-385020:-1:exon

position:384934:-1
position: 384934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385020:-1
position: 385020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:384636-384710:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:384393-384527:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:384185-384291:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:383985-384117:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:383731-383883:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:383532-383659:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:382804-383083:-1:exon

MYO1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MYO1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Ia isoform X2
translation: MEGTTPLLDAEAVGDLVLLDPLTEESLVQTLQERFRRHDIYTYIGNVVISVNPYQSLPLYTPEKVEEYHNCSFFAVKPHIFAIADDAYRSLRDRDRDQCILITGESGAGKTEASKLVMSFVAAVSSKGEEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGEPLGGVISNYLLEKSRIVRHVKGERNFHIFYQLLAGASPELLQQLKLHQDCRHYGYLNRESSSLPGMDDAANFHAMQDAMRVIGFSPAEVTELLEVTAVVLKLGNVQLSSSFQASGMEACSITEPQELHEICKLIGLDPSTLEQALCSRTVKARDETVLTTLTVPQGYYGRDALAKNIYSRLFDWLVHRINTSIQVKSDEQRKVMGVLDIYGFEIFQDNSFEQFIINYCNEKLQQIFILMTLKEEQEEYVREGIQWTPVEFFDNSIICNLIENSTSGILAMLDEECLRPGVVNEDTFLNKLNQLLATHKHYESKETQNARRVTDTSLPPRCFRIHHYAGKVTYNVTGFIEKNNDLLFRDLSQAMWAARHALLRSLFPEGDPQKVSLKLPPTAGFQFKSSVALLMKNLYSKNPNYIRCIKPNDTKSAMVFTPELVLAQVRYLGLMENVRVRRAGYAFRQLYGPFLQRYKMLNPRTWPRWDGGDREGAEVLLAGLAFPAEELAFGHTKIFIRSPRTLFDLEQQRQERVAQLATLIQKVFRGWRCRTQYQLMRKSQILISAWFRGHRQKNHYKQMKRSALILQAYARGWKARRTYRKYFRSSASTCVANFIYRRLVQRYLVGLAKNLPPLSVTDRTWPPAPYQFLDNTNQELKNIFYHWKCKKYRDQLPPARRAQLQAKLCASELFKDKKTLYPKSLQQPFRGEYLGLKQNPKYQKLLAVAKDKLVMADTVRKVNRANGKTVPRLLLLTTEHLVLADPKAAQPKTVLSLSDIRGVSVTRFSDGFLALHLKEVSTVGAKGDFLLVSDHLIELVTRLHQTFEAVTGQALPLHITDRFSTRFPKGDVSITVVESPKASTNGPVCKKKGSHKMEVLVH
SIO_010081: MYO1A
subclass of: SO_0000673
so part of: MYO1A
location: complement(join(382960..383083,383532..383659,383731..383883,383985..384117,384185..384291,384393..384527,384636..384710,385281..385349,385445..385594,385730..385823,385903..386103,386184..386410,387337..387537,387645..387707,387959..388063,388176..388241,388325..388411,388495..388613,388701..388848,388931..389034,389129..389227,389298..389361,389509..389555,389659..389763,389878..389972,390164..390279,390912..391034))
location: region:382960-391034:-1
so has part: feature:390912-391034:-1:exon
so has part: feature:390164-390279:-1:exon
so has part: feature:389878-389972:-1:exon
so has part: feature:389659-389763:-1:exon
so has part: feature:389509-389555:-1:exon
so has part: feature:389298-389361:-1:exon
so has part: feature:389129-389227:-1:exon
so has part: feature:388931-389034:-1:exon
so has part: feature:388701-388848:-1:exon
so has part: feature:388495-388613:-1:exon
so has part: feature:388325-388411:-1:exon
so has part: feature:388176-388241:-1:exon
so has part: feature:387959-388063:-1:exon
so has part: feature:387645-387707:-1:exon
so has part: feature:387337-387537:-1:exon
so has part: feature:386184-386410:-1:exon
so has part: feature:385903-386103:-1:exon
so has part: feature:385730-385823:-1:exon
so has part: feature:385445-385594:-1:exon
so has part: feature:385281-385349:-1:exon
so has part: feature:384636-384710:-1:exon
so has part: feature:384393-384527:-1:exon
so has part: feature:384185-384291:-1:exon
so has part: feature:383985-384117:-1:exon
so has part: feature:383731-383883:-1:exon
so has part: feature:383532-383659:-1:exon
so has part: feature:382960-383083:-1:exon

XP_031949764.1
type: Protein
SIO_000068: ncbiprotein

position:382960:-1
position: 382960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391034:-1
position: 391034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390912-391034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390164-390279:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389878-389972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389659-389763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389509-389555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389298-389361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389129-389227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388931-389034:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388701-388848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388495-388613:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:388325-388411:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:388176-388241:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387959-388063:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:387645-387707:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:387337-387537:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:386184-386410:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:385903-386103:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:385730-385823:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:385445-385594:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:385281-385349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:384636-384710:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:384393-384527:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:384185-384291:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:383985-384117:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:383731-383883:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:383532-383659:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:382960-383083:-1:exon

MYO1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MYO1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Ia isoform X1
translation: MEGTTPLLDAEAVGDLVLLDPLTEESLVQTLQERFRRHDIYTYIGNVVISVNPYQSLPLYTPEKVEEYHNCSFFAVKPHIFAIADDAYRSLRDRDRDQCILITGESGAGKTEASKLVMSFVAAVSSKGEEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGEPLGGVISNYLLEKSRIVRHVKGERNFHIFYQLLAGASPELLQQLKLHQDCRHYGYLNRESSSLPGMDDAANFHAMQDAMRVIGFSPAEVTELLEVTAVVLKLGNVQLSSSFQASGMEACSITEPQELHEICKLIGLDPSTLEQALCSRTVKARDETVLTTLTVPQGYYGRDALAKNIYSRLFDWLVHRINTSIQVKSDEQRKVMGVLDIYGFEIFQDNSFEQFIINYCNEKLQQIFILMTLKEEQEEYVREGIQWTPVEFFDNSIICNLIENSTSGILAMLDEECLRPGVVNEDTFLNKLNQLLATHKHYESKETQNARRVTDTSLPPRCFRIHHYAGKVTYNVTGFIEKNNDLLFRDLSQAMWAARHALLRSLFPEGDPQKVSLKLPPTAGFQFKSSVALLMKNLYSKNPNYIRCIKPNDTKSAMVFTPELVLAQVRYLGLMENVRVRRAGYAFRQLYGPFLQRYKMLNPRTWPRWDGGDREGAEVLLAGLAFPAEELAFGHTKIFIRSPRTLFDLEQQRQERVAQLATLIQKVFRGWRCRTQYQLMRKSQILISAWFRGHRQKNHYKQMKRSALILQAYARGWKSRWLLRELKSQRQRHAAASTIAAHWRGYQARRTYRKYFRSSASTCVANFIYRRLVQRYLVGLAKNLPPLSVTDRTWPPAPYQFLDNTNQELKNIFYHWKCKKYRDQLPPARRAQLQAKLCASELFKDKKTLYPKSLQQPFRGEYLGLKQNPKYQKLLAVAKDKLVMADTVRKVNRANGKTVPRLLLLTTEHLVLADPKAAQPKTVLSLSDIRGVSVTRFSDGFLALHLKEVSTVGAKGDFLLVSDHLIELVTRLHQTFEAVTGQALPLHITDRFSTRFPKGDVSITVVESPKASTNGPVCKKKGSHKMEVLVH
SIO_010081: MYO1A
subclass of: SO_0000673
so part of: MYO1A
location: complement(join(382960..383083,383532..383659,383731..383883,383985..384117,384185..384291,384393..384527,384636..384710,384934..385020,385281..385349,385445..385594,385730..385823,385903..386103,386184..386410,387337..387537,387645..387707,387959..388063,388176..388241,388325..388411,388495..388613,388701..388848,388931..389034,389129..389227,389298..389361,389509..389555,389659..389763,389878..389972,390164..390279,390912..391034))
location: region:382960-391034:-1
so has part: feature:390912-391034:-1:exon
so has part: feature:390164-390279:-1:exon
so has part: feature:389878-389972:-1:exon
so has part: feature:389659-389763:-1:exon
so has part: feature:389509-389555:-1:exon
so has part: feature:389298-389361:-1:exon
so has part: feature:389129-389227:-1:exon
so has part: feature:388931-389034:-1:exon
so has part: feature:388701-388848:-1:exon
so has part: feature:388495-388613:-1:exon
so has part: feature:388325-388411:-1:exon
so has part: feature:388176-388241:-1:exon
so has part: feature:387959-388063:-1:exon
so has part: feature:387645-387707:-1:exon
so has part: feature:387337-387537:-1:exon
so has part: feature:386184-386410:-1:exon
so has part: feature:385903-386103:-1:exon
so has part: feature:385730-385823:-1:exon
so has part: feature:385445-385594:-1:exon
so has part: feature:385281-385349:-1:exon
so has part: feature:384934-385020:-1:exon
so has part: feature:384636-384710:-1:exon
so has part: feature:384393-384527:-1:exon
so has part: feature:384185-384291:-1:exon
so has part: feature:383985-384117:-1:exon
so has part: feature:383731-383883:-1:exon
so has part: feature:383532-383659:-1:exon
so has part: feature:382960-383083:-1:exon

XP_031949763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390912-391034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390164-390279:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389878-389972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389659-389763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389509-389555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389298-389361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389129-389227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388931-389034:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388701-388848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388495-388613:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:388325-388411:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:388176-388241:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387959-388063:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:387645-387707:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:387337-387537:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:386184-386410:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:385903-386103:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:385730-385823:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:385445-385594:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:385281-385349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:384934-385020:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:384636-384710:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:384393-384527:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:384185-384291:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:383985-384117:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:383731-383883:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:383532-383659:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:382960-383083:-1:exon

NEMP1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: NEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(392470..397340)
location: region:392470-397340:-1
so has part: feature:392470-397340:-1:exon
subclass of: SO_0000010

116436665
type: Gene
SIO_000068: ncbigene

position:392470:-1
position: 392470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397340:-1
position: 397340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392470-397340:-1:exon

NEMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NEMP1
product: nuclear envelope integral membrane protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_032093943.1
SIO_010081: NEMP1
subclass of: SO_0000673
so part of: NEMP1
location: complement(join(392470..393204,393657..393868,394102..394275,394804..395029,395212..395326,395492..395585,395699..395771,396028..396238,396318..396439,397033..397340))
location: region:392470-397340:-1
so has part: feature:397033-397340:-1:exon
so has part: feature:396318-396439:-1:exon
so has part: feature:396028-396238:-1:exon
so has part: feature:395699-395771:-1:exon
so has part: feature:395492-395585:-1:exon
so has part: feature:395212-395326:-1:exon
so has part: feature:394804-395029:-1:exon
so has part: feature:394102-394275:-1:exon
so has part: feature:393657-393868:-1:exon
so has part: feature:392470-393204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397033-397340:-1:exon

position:397033:-1
position: 397033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:396318-396439:-1:exon

position:396318:-1
position: 396318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396439:-1
position: 396439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:396028-396238:-1:exon

position:396028:-1
position: 396028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396238:-1
position: 396238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:395699-395771:-1:exon

position:395699:-1
position: 395699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395771:-1
position: 395771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:395492-395585:-1:exon

position:395492:-1
position: 395492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395585:-1
position: 395585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:395212-395326:-1:exon

position:395212:-1
position: 395212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395326:-1
position: 395326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:394804-395029:-1:exon

position:394804:-1
position: 394804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395029:-1
position: 395029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:394102-394275:-1:exon

position:394102:-1
position: 394102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394275:-1
position: 394275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:393657-393868:-1:exon

position:393657:-1
position: 393657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393868:-1
position: 393868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:392470-393204:-1:exon

position:393204:-1
position: 393204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear envelope integral membrane protein 1
translation: MNPPPGQRRLPVLPVLLLLLLLLLPFLIVEAAGAKDPIIPLQEGHTYHHRESQRFCYTNTRVPRWHDIWTRTQIRVTSSRMIRVTQVDSEEELEKFSVWNVVFSFLRGKLNDTSIDVDLYSNKTCLKVELLEPGTTYSVVLFRRFDPKLFLVFFLGLLLFFCGDTLSRSQIFYYSAGISVGLLASLLVLVYMMSKVMPKKSPVYFLLVGGWSFSLYLLQLIFKNLREICKSYWQYLLGYLLFVGLLSFAVCYRYGPLENERSINLLSWALQLLGLLLMYSGIQIHPIALGLVLVAICTKNLDYPLQWAFAAYRRVQSSKLGPTPPRLLTEEEYRLQGEVETRKALAELRSFCQSPEFSAWSTVSRIQSPKRFADFVGGASHVTPNEVSVHEREFGLESLFIDEQLFEEDDDDDDDEDSVNDSFAGNHRSDSLPHNHLDVQ
SIO_010081: NEMP1
subclass of: SO_0000673
so part of: NEMP1
location: complement(join(393658..393868,394102..394275,394804..395029,395212..395326,395492..395585,395699..395771,396028..396238,396318..396439,397033..397129))
location: region:393658-397129:-1
so has part: feature:397033-397129:-1:exon
so has part: feature:396318-396439:-1:exon
so has part: feature:396028-396238:-1:exon
so has part: feature:395699-395771:-1:exon
so has part: feature:395492-395585:-1:exon
so has part: feature:395212-395326:-1:exon
so has part: feature:394804-395029:-1:exon
so has part: feature:394102-394275:-1:exon
so has part: feature:393658-393868:-1:exon

XP_031949834.1
type: Protein
SIO_000068: ncbiprotein

position:393658:-1
position: 393658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397129:-1
position: 397129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397033-397129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:396318-396439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:396028-396238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395699-395771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395492-395585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:395212-395326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394804-395029:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394102-394275:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393658-393868:-1:exon

NAB2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: NAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 399055..403489
location: region:399055-403489:1
so has part: feature:399055-403489:1:exon
subclass of: SO_0000010

116436654
type: Gene
SIO_000068: ncbigene

position:399055:1
position: 399055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403489:1
position: 403489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399055-403489:1:exon

NAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NAB2
product: NGFI-A binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_032093926.1
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: join(399055..399110,400125..400926,401144..401277,401769..401820,401983..402115,402202..402402,402514..403489)
location: region:399055-403489:1
so has part: feature:399055-399110:1:exon
so has part: feature:400125-400926:1:exon
so has part: feature:401144-401277:1:exon
so has part: feature:401769-401820:1:exon
so has part: feature:401983-402115:1:exon
so has part: feature:402202-402402:1:exon
so has part: feature:402514-403489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399055-399110:1:exon

position:399110:1
position: 399110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400125-400926:1:exon

position:400125:1
position: 400125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400926:1
position: 400926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:401144-401277:1:exon

position:401144:1
position: 401144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401277:1
position: 401277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:401769-401820:1:exon

position:401769:1
position: 401769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401820:1
position: 401820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:401983-402115:1:exon

position:401983:1
position: 401983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402115:1
position: 402115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:402202-402402:1:exon

position:402202:1
position: 402202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402402:1
position: 402402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:402514-403489:1:exon

position:402514:1
position: 402514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NAB2
product: NGFI-A binding protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_032093927.1
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: join(399895..400926,401144..401277,401769..401820,401983..402115,402514..403489)
location: region:399895-403489:1
so has part: feature:399895-400926:1:exon
so has part: feature:401144-401277:1:exon
so has part: feature:401769-401820:1:exon
so has part: feature:401983-402115:1:exon
so has part: feature:402514-403489:1:exon

position:399895:1
position: 399895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399895-400926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:401144-401277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401769-401820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401983-402115:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402514-403489:1:exon

NAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NAB2
product: NGFI-A binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XM_032093925.1
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: join(399896..400926,401144..401277,401769..401820,401983..402115,402202..402402,402514..403489)
location: region:399896-403489:1
so has part: feature:399896-400926:1:exon
so has part: feature:401144-401277:1:exon
so has part: feature:401769-401820:1:exon
so has part: feature:401983-402115:1:exon
so has part: feature:402202-402402:1:exon
so has part: feature:402514-403489:1:exon

position:399896:1
position: 399896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399896-400926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:401144-401277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401769-401820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401983-402115:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402202-402402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402514-403489:1:exon

NAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NGFI-A-binding protein 2 isoform X1
translation: MSVHPGGESVCPSVHHRLAMALPRTLGELQLYRVLQRANLLGYYETFIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWASNPGLFSQPVSAVPVSSIPLFKLSEAGGRKALSNGHASPGEAASKGAGSAGTPPARSPTEPGEKLSPSAAPPWPGRSTPESEGGGDEEPGGPPFSPGGSGGEQAAGTELEPELARTVVESVERLLQSCPRGGEAELRALMKLNKKLAKAVGHIFQLEDGDRQKEEEIRRHSAIYGRGEARRREGKQLTLHELIINEAAAQFCLRDNSLLLRRVELFSLSRQVARESTYLSSLKVARAHPEDSGAVVAKRLKQEAGEQSRPELLALPVGLEPPGAAYRASLEEDTGSLSGESLDGHLQAAGACPRLTPPPGAAPDVPLGLAPHGLWSRHILQQTLMDEGLRLARLVSHERVGRLSPCLPGKPPGPEFEDGLAERGPPAPPEPPRGTIKVEQETSRQ
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: join(400075..400926,401144..401277,401769..401820,401983..402115,402202..402402,402514..402608)
location: region:400075-402608:1
so has part: feature:400075-400926:1:exon
so has part: feature:401144-401277:1:exon
so has part: feature:401769-401820:1:exon
so has part: feature:401983-402115:1:exon
so has part: feature:402202-402402:1:exon
so has part: feature:402514-402608:1:exon

XP_031949816.1
type: Protein
SIO_000068: ncbiprotein

position:400075:1
position: 400075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402608:1
position: 402608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400075-400926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:401144-401277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401769-401820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401983-402115:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402202-402402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402514-402608:1:exon

NAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NGFI-A-binding protein 2 isoform X3
translation: MSVHPGGESVCPSVHHRLAMALPRTLGELQLYRVLQRANLLGYYETFIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWASNPGLFSQPVSAVPVSSIPLFKLSEAGGRKALSNGHASPGEAASKGAGSAGTPPARSPTEPGEKLSPSAAPPWPGRSTPESEGGGDEEPGGPPFSPGGSGGEQAAGTELEPELARTVVESVERLLQSCPRGGEAELRALMKLNKKLAKAVGHIFQLEDGDRQKEEEIRRHSAIYGRGEARRREGKQLTLHELIINEAAAQFCLRDNSLLLRRVELFSLSRQVARESTYLSSLKVARAHPEDSGAVVAKRLKQEAGEQSRPELLALPVGLEPPGAAYRASLEEDTGSLSGESLDGHLQEFEDGLAERGPPAPPEPPRGTIKVEQETSRQ
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: join(400075..400926,401144..401277,401769..401820,401983..402115,402514..402608)
location: region:400075-402608:1
so has part: feature:400075-400926:1:exon
so has part: feature:401144-401277:1:exon
so has part: feature:401769-401820:1:exon
so has part: feature:401983-402115:1:exon
so has part: feature:402514-402608:1:exon

XP_031949818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400075-400926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:401144-401277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401769-401820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401983-402115:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402514-402608:1:exon

NAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NGFI-A-binding protein 2 isoform X2
translation: MALPRTLGELQLYRVLQRANLLGYYETFIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWASNPGLFSQPVSAVPVSSIPLFKLSEAGGRKALSNGHASPGEAASKGAGSAGTPPARSPTEPGEKLSPSAAPPWPGRSTPESEGGGDEEPGGPPFSPGGSGGEQAAGTELEPELARTVVESVERLLQSCPRGGEAELRALMKLNKKLAKAVGHIFQLEDGDRQKEEEIRRHSAIYGRGEARRREGKQLTLHELIINEAAAQFCLRDNSLLLRRVELFSLSRQVARESTYLSSLKVARAHPEDSGAVVAKRLKQEAGEQSRPELLALPVGLEPPGAAYRASLEEDTGSLSGESLDGHLQAAGACPRLTPPPGAAPDVPLGLAPHGLWSRHILQQTLMDEGLRLARLVSHERVGRLSPCLPGKPPGPEFEDGLAERGPPAPPEPPRGTIKVEQETSRQ
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: join(400132..400926,401144..401277,401769..401820,401983..402115,402202..402402,402514..402608)
location: region:400132-402608:1
so has part: feature:400132-400926:1:exon
so has part: feature:401144-401277:1:exon
so has part: feature:401769-401820:1:exon
so has part: feature:401983-402115:1:exon
so has part: feature:402202-402402:1:exon
so has part: feature:402514-402608:1:exon

XP_031949817.1
type: Protein
SIO_000068: ncbiprotein

position:400132:1
position: 400132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400132-400926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:401144-401277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401769-401820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401983-402115:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402202-402402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:402514-402608:1:exon

STAT6
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: STAT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(403978..413862)
location: region:403978-413862:-1
so has part: feature:403978-413862:-1:exon
subclass of: SO_0000010

116436637
type: Gene
SIO_000068: ncbigene

position:403978:-1
position: 403978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413862:-1
position: 413862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403978-413862:-1:exon

STAT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: STAT6
product: signal transducer and activator of transcription 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_032093886.1
SIO_010081: STAT6
subclass of: SO_0000673
so part of: STAT6
location: complement(join(403978..404158,404235..404381,404600..404680,404781..404885,404972..405100,405372..405441,405626..405772,405879..406015,406110..406204,406281..406487,406619..406711,406839..406961,407063..407150,407220..407408,407519..407650,407765..408069,408155..408238,409757..409895,410002..410131,413529..413862))
location: region:403978-413862:-1
so has part: feature:413529-413862:-1:exon
so has part: feature:410002-410131:-1:exon
so has part: feature:409757-409895:-1:exon
so has part: feature:408155-408238:-1:exon
so has part: feature:407765-408069:-1:exon
so has part: feature:407519-407650:-1:exon
so has part: feature:407220-407408:-1:exon
so has part: feature:407063-407150:-1:exon
so has part: feature:406839-406961:-1:exon
so has part: feature:406619-406711:-1:exon
so has part: feature:406281-406487:-1:exon
so has part: feature:406110-406204:-1:exon
so has part: feature:405879-406015:-1:exon
so has part: feature:405626-405772:-1:exon
so has part: feature:405372-405441:-1:exon
so has part: feature:404972-405100:-1:exon
so has part: feature:404781-404885:-1:exon
so has part: feature:404600-404680:-1:exon
so has part: feature:404235-404381:-1:exon
so has part: feature:403978-404158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413529-413862:-1:exon

position:413529:-1
position: 413529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:410002-410131:-1:exon

position:410002:-1
position: 410002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410131:-1
position: 410131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:409757-409895:-1:exon

position:409757:-1
position: 409757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409895:-1
position: 409895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:408155-408238:-1:exon

position:408155:-1
position: 408155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408238:-1
position: 408238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:407765-408069:-1:exon

position:407765:-1
position: 407765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408069:-1
position: 408069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:407519-407650:-1:exon

position:407519:-1
position: 407519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407650:-1
position: 407650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407220-407408:-1:exon

position:407220:-1
position: 407220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407408:-1
position: 407408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:407063-407150:-1:exon

position:407063:-1
position: 407063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407150:-1
position: 407150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:406839-406961:-1:exon

position:406839:-1
position: 406839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406961:-1
position: 406961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:406619-406711:-1:exon

position:406619:-1
position: 406619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406711:-1
position: 406711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:406281-406487:-1:exon

position:406281:-1
position: 406281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406487:-1
position: 406487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:406110-406204:-1:exon

position:406110:-1
position: 406110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406204:-1
position: 406204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:405879-406015:-1:exon

position:405879:-1
position: 405879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406015:-1
position: 406015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:405626-405772:-1:exon

position:405626:-1
position: 405626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405772:-1
position: 405772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:405372-405441:-1:exon

position:405372:-1
position: 405372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405441:-1
position: 405441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:404972-405100:-1:exon

position:404972:-1
position: 404972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405100:-1
position: 405100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:404781-404885:-1:exon

position:404781:-1
position: 404781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404885:-1
position: 404885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:404600-404680:-1:exon

position:404600:-1
position: 404600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404680:-1
position: 404680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:404235-404381:-1:exon

position:404235:-1
position: 404235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404381:-1
position: 404381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:403978-404158:-1:exon

position:404158:-1
position: 404158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STAT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: STAT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer and activator of transcription 6
translation: MGTGRYGAGVRSPVGGGLIWGRRGADGCRSPSVERSGSPRSCRSWSRSRCPPTPPLARLLPLPALGASRRSGAAAGTGRARRRYGVNEGPRGPAGPAAPRPRLLSPGDCSKMSLWNLVSHMPPEEFSSLSTEFPRSLRCLLAEWLENQPWEFINGSDTFCTSMASRMLSDMLEKLRSAASSDGQQCQILQQVSGIESTFRHDPLRLVAVMRAILEGEKAAVLKRDRHLPLSFHRRQEELKFNVGLQRLQHRVREIQALREEGPGRDGAVESSTAPRELPTLTLEAVKELEVAKQQVLKRIQIWKRQQQLAGNGAIFEENLAPLQKRCEKLVEVYFQLQQQVMAASTELGPELLPRLLERLNEVLSSLVKSSFLVEKQPPQVLKTQTKFQASVRFLLGPQLLKAAPKPYVVRADMVTEKQARELELSNYSNTLSESTGEIMHNMVALETNPTSGTCCANFKNVLLKKIKRCERKGSESVTEEKCAVLFSTNVALTPSNISIQLQVLSLPIVVIVHGNQDNNAKATVLWDNAFSEIDRVPFVVAERVPWEKMCDTLNLKFMAEVQTTKGLLKEHYFFLAQKIFNDHSARFEDFQSRHVSWAQFNKEILPGRGFTFWQWFDGVLDLTKRCLKSYWSDRLIVGFISKQYVCKLLSAEPDGTFLLRFSDSEIGGVTIAYVIRGKDGSSQVENIQPFSAKDLSIRSLGDRIRDLGQLRNLYPNIPKDQAFGSHYNKEQTGKDVRGYVSTAIKMTVESERDQQPPSTMGAPPEAPQVQVFSLPPMLQPELHPESLQPVLPPICPPTPFCPQPIPTGYPAVESNMNMMVPDRLSSPFHSPSPILSSPLAMDPSLSHCQEPAFRTPGPFMPNQYMPGEVSQLLPGGPSVEPRDEEMPELPPFPAVEDGPLQSSPRWMSPSMEQSPGSELEQFLQDVPLLPPFAPLPQHSGYPNSSPSCWGLGEARWDDSIRPGHA
SIO_010081: STAT6
subclass of: SO_0000673
so part of: STAT6
location: complement(join(403978..404158,404235..404381,404600..404680,404781..404885,404972..405100,405372..405441,405626..405772,405879..406015,406110..406204,406281..406487,406619..406711,406839..406961,407063..407150,407220..407408,407519..407650,407765..408069,408155..408238,409757..409895,410002..410131,413529..413847))
location: region:403978-413847:-1
so has part: feature:413529-413847:-1:exon
so has part: feature:410002-410131:-1:exon
so has part: feature:409757-409895:-1:exon
so has part: feature:408155-408238:-1:exon
so has part: feature:407765-408069:-1:exon
so has part: feature:407519-407650:-1:exon
so has part: feature:407220-407408:-1:exon
so has part: feature:407063-407150:-1:exon
so has part: feature:406839-406961:-1:exon
so has part: feature:406619-406711:-1:exon
so has part: feature:406281-406487:-1:exon
so has part: feature:406110-406204:-1:exon
so has part: feature:405879-406015:-1:exon
so has part: feature:405626-405772:-1:exon
so has part: feature:405372-405441:-1:exon
so has part: feature:404972-405100:-1:exon
so has part: feature:404781-404885:-1:exon
so has part: feature:404600-404680:-1:exon
so has part: feature:404235-404381:-1:exon
so has part: feature:403978-404158:-1:exon

XP_031949777.1
type: Protein
SIO_000068: ncbiprotein

position:413847:-1
position: 413847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413529-413847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:410002-410131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:409757-409895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:408155-408238:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:407765-408069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:407519-407650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407220-407408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407063-407150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406839-406961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:406619-406711:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:406281-406487:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:406110-406204:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:405879-406015:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405626-405772:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:405372-405441:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:404972-405100:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:404781-404885:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:404600-404680:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:404235-404381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:403978-404158:-1:exon

LRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 416474..495156
location: region:416474-495156:1
so has part: feature:416474-495156:1:exon
subclass of: SO_0000010

116436628
type: Gene
SIO_000068: ncbigene

position:416474:1
position: 416474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495156:1
position: 495156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416474-495156:1:exon

LRP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: LRP1
product: LDL receptor related protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XR_004237046.1
SIO_010081: LRP1
so part of: LRP1
location: join(416474..416582,431957..432079,436672..436809,438421..438540,439766..439894,440039..440302,453019..453181,454098..454320,454585..454774,455905..456048,456205..456441,456582..456762,456869..457091,457238..457427,457771..457896,457990..458130,458399..458524,458762..458878,458984..459064,460017..460067,461521..461688,461931..462113,462522..462722,462804..463049,463251..463448,464172..464376,464485..464649,464912..465156,465419..465550,465633..465860,466003..466177,466568..466662,466910..467059,467176..467316,467548..467676,468452..468583,468783..468917,468992..469121,469603..469729,469917..470068,470183..470307,470469..470840,471871..472060,472419..472623,473176..473368,473902..474027,474113..474241,475074..475193,475802..475915,476284..476433,476683..476820,477301..477417,477602..477730,477806..477928,478327..478467,478554..478741,479224..479407,479586..479671,479917..480036,480571..480758,481150..481355,481549..481737,481914..482062,482467..482560,482839..482955,483047..483166,483596..483718,484518..484643,485460..485576,487225..487331,487502..487634,487976..488095,488559..488656,488909..489052,489130..489264,489443..489562,489929..490196)
location: region:416474-490196:1
so has part: feature:416474-416582:1:exon
so has part: feature:431957-432079:1:exon
so has part: feature:436672-436809:1:exon
so has part: feature:438421-438540:1:exon
so has part: feature:439766-439894:1:exon
so has part: feature:440039-440302:1:exon
so has part: feature:453019-453181:1:exon
so has part: feature:454098-454320:1:exon
so has part: feature:454585-454774:1:exon
so has part: feature:455905-456048:1:exon
so has part: feature:456205-456441:1:exon
so has part: feature:456582-456762:1:exon
so has part: feature:456869-457091:1:exon
so has part: feature:457238-457427:1:exon
so has part: feature:457771-457896:1:exon
so has part: feature:457990-458130:1:exon
so has part: feature:458399-458524:1:exon
so has part: feature:458762-458878:1:exon
so has part: feature:458984-459064:1:exon
so has part: feature:460017-460067:1:exon
so has part: feature:461521-461688:1:exon
so has part: feature:461931-462113:1:exon
so has part: feature:462522-462722:1:exon
so has part: feature:462804-463049:1:exon
so has part: feature:463251-463448:1:exon
so has part: feature:464172-464376:1:exon
so has part: feature:464485-464649:1:exon
so has part: feature:464912-465156:1:exon
so has part: feature:465419-465550:1:exon
so has part: feature:465633-465860:1:exon
so has part: feature:466003-466177:1:exon
so has part: feature:466568-466662:1:exon
so has part: feature:466910-467059:1:exon
so has part: feature:467176-467316:1:exon
so has part: feature:467548-467676:1:exon
so has part: feature:468452-468583:1:exon
so has part: feature:468783-468917:1:exon
so has part: feature:468992-469121:1:exon
so has part: feature:469603-469729:1:exon
so has part: feature:469917-470068:1:exon
so has part: feature:470183-470307:1:exon
so has part: feature:470469-470840:1:exon
so has part: feature:471871-472060:1:exon
so has part: feature:472419-472623:1:exon
so has part: feature:473176-473368:1:exon
so has part: feature:473902-474027:1:exon
so has part: feature:474113-474241:1:exon
so has part: feature:475074-475193:1:exon
so has part: feature:475802-475915:1:exon
so has part: feature:476284-476433:1:exon
so has part: feature:476683-476820:1:exon
so has part: feature:477301-477417:1:exon
so has part: feature:477602-477730:1:exon
so has part: feature:477806-477928:1:exon
so has part: feature:478327-478467:1:exon
so has part: feature:478554-478741:1:exon
so has part: feature:479224-479407:1:exon
so has part: feature:479586-479671:1:exon
so has part: feature:479917-480036:1:exon
so has part: feature:480571-480758:1:exon
so has part: feature:481150-481355:1:exon
so has part: feature:481549-481737:1:exon
so has part: feature:481914-482062:1:exon
so has part: feature:482467-482560:1:exon
so has part: feature:482839-482955:1:exon
so has part: feature:483047-483166:1:exon
so has part: feature:483596-483718:1:exon
so has part: feature:484518-484643:1:exon

position:490196:1
position: 490196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416474-416582:1:exon

position:416582:1
position: 416582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:431957-432079:1:exon

position:431957:1
position: 431957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432079:1
position: 432079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436672-436809:1:exon

position:436672:1
position: 436672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436809:1
position: 436809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:438421-438540:1:exon

position:438421:1
position: 438421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438540:1
position: 438540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:439766-439894:1:exon

position:439766:1
position: 439766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439894:1
position: 439894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:440039-440302:1:exon

position:440039:1
position: 440039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440302:1
position: 440302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:453019-453181:1:exon

position:453019:1
position: 453019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453181:1
position: 453181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:454098-454320:1:exon

position:454098:1
position: 454098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454320:1
position: 454320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:454585-454774:1:exon

position:454585:1
position: 454585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454774:1
position: 454774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:455905-456048:1:exon

position:455905:1
position: 455905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456048:1
position: 456048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:456205-456441:1:exon

position:456205:1
position: 456205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456441:1
position: 456441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:456582-456762:1:exon

position:456582:1
position: 456582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456762:1
position: 456762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:456869-457091:1:exon

position:456869:1
position: 456869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457091:1
position: 457091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:457238-457427:1:exon

position:457238:1
position: 457238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457427:1
position: 457427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:457771-457896:1:exon

position:457771:1
position: 457771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457896:1
position: 457896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:457990-458130:1:exon

position:457990:1
position: 457990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458130:1
position: 458130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:458399-458524:1:exon

position:458399:1
position: 458399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458524:1
position: 458524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:458762-458878:1:exon

position:458762:1
position: 458762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458878:1
position: 458878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:458984-459064:1:exon

position:458984:1
position: 458984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459064:1
position: 459064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:460017-460067:1:exon

position:460017:1
position: 460017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460067:1
position: 460067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:461521-461688:1:exon

position:461521:1
position: 461521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461688:1
position: 461688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:461931-462113:1:exon

position:461931:1
position: 461931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462113:1
position: 462113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:462522-462722:1:exon

position:462522:1
position: 462522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462722:1
position: 462722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:462804-463049:1:exon

position:462804:1
position: 462804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463049:1
position: 463049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:463251-463448:1:exon

position:463251:1
position: 463251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463448:1
position: 463448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:464172-464376:1:exon

position:464172:1
position: 464172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464376:1
position: 464376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:464485-464649:1:exon

position:464485:1
position: 464485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464649:1
position: 464649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:464912-465156:1:exon

position:464912:1
position: 464912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465156:1
position: 465156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:465419-465550:1:exon

position:465419:1
position: 465419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465550:1
position: 465550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:465633-465860:1:exon

position:465633:1
position: 465633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465860:1
position: 465860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:466003-466177:1:exon

position:466003:1
position: 466003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466177:1
position: 466177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:466568-466662:1:exon

position:466568:1
position: 466568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466662:1
position: 466662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:466910-467059:1:exon

position:466910:1
position: 466910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467059:1
position: 467059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:467176-467316:1:exon

position:467176:1
position: 467176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467316:1
position: 467316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:467548-467676:1:exon

position:467548:1
position: 467548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467676:1
position: 467676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:468452-468583:1:exon

position:468452:1
position: 468452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468583:1
position: 468583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:468783-468917:1:exon

position:468783:1
position: 468783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468917:1
position: 468917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:468992-469121:1:exon

position:468992:1
position: 468992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469121:1
position: 469121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:469603-469729:1:exon

position:469603:1
position: 469603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469729:1
position: 469729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:469917-470068:1:exon

position:469917:1
position: 469917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470068:1
position: 470068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:470183-470307:1:exon

position:470183:1
position: 470183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470307:1
position: 470307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:470469-470840:1:exon

position:470469:1
position: 470469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470840:1
position: 470840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:471871-472060:1:exon

position:471871:1
position: 471871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472060:1
position: 472060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:472419-472623:1:exon

position:472419:1
position: 472419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472623:1
position: 472623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:473176-473368:1:exon

position:473176:1
position: 473176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473368:1
position: 473368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:473902-474027:1:exon

position:473902:1
position: 473902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474027:1
position: 474027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:474113-474241:1:exon

position:474113:1
position: 474113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474241:1
position: 474241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:475074-475193:1:exon

position:475074:1
position: 475074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475193:1
position: 475193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:475802-475915:1:exon

position:475802:1
position: 475802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475915:1
position: 475915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:476284-476433:1:exon

position:476284:1
position: 476284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476433:1
position: 476433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:476683-476820:1:exon

position:476683:1
position: 476683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476820:1
position: 476820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:477301-477417:1:exon

position:477301:1
position: 477301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477417:1
position: 477417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:477602-477730:1:exon

position:477602:1
position: 477602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477730:1
position: 477730
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 54
SIO_000628: feature:477806-477928:1:exon

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position:477928:1
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urn:…
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SIO_000628: feature:478327-478467:1:exon

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urn:…
SIO_000300: 56
SIO_000628: feature:478554-478741:1:exon

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reference: sequence
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urn:…
SIO_000300: 57
SIO_000628: feature:479224-479407:1:exon

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reference: sequence
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urn:…
SIO_000300: 58
SIO_000628: feature:479586-479671:1:exon

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urn:…
SIO_000300: 59
SIO_000628: feature:479917-480036:1:exon

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urn:…
SIO_000300: 60
SIO_000628: feature:480571-480758:1:exon

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urn:…
SIO_000300: 61
SIO_000628: feature:481150-481355:1:exon

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urn:…
SIO_000300: 62
SIO_000628: feature:481549-481737:1:exon

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urn:…
SIO_000300: 63
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SIO_000300: 64
SIO_000628: feature:482467-482560:1:exon

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urn:…
SIO_000300: 65
SIO_000628: feature:482839-482955:1:exon

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urn:…
SIO_000300: 66
SIO_000628: feature:483047-483166:1:exon

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reference: sequence
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urn:…
SIO_000300: 67
SIO_000628: feature:483596-483718:1:exon

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urn:…
SIO_000300: 68
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urn:…
SIO_000300: 69
SIO_000628: feature:485460-485576:1:exon

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SIO_000300: 70
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urn:…
SIO_000300: 71
SIO_000628: feature:487502-487634:1:exon

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urn:…
SIO_000300: 72
SIO_000628: feature:487976-488095:1:exon

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urn:…
SIO_000300: 73
SIO_000628: feature:488559-488656:1:exon

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urn:…
SIO_000300: 74
SIO_000628: feature:488909-489052:1:exon

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reference: sequence
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urn:…
SIO_000300: 75
SIO_000628: feature:489130-489264:1:exon

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urn:…
SIO_000300: 76
SIO_000628: feature:489443-489562:1:exon

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reference: sequence
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position:489562:1
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reference: sequence
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urn:…
SIO_000300: 77
SIO_000628: feature:489929-490196:1:exon

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LRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LRP1
product: LDL receptor related protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_032093858.1
SIO_010081: LRP1
subclass of: SO_0000673
so part of: LRP1
location: join(416475..416582,431957..432079,436672..436809,438421..438540,439766..439894,440039..440302,453019..453181,454098..454320,454585..454774,455905..456048,456205..456441,456582..456762,456869..457091,457238..457427,457771..457896,457990..458130,458399..458524,458762..458878,458984..459064,460017..460067,461521..461688,461931..462113,462522..462722,462804..463049,463251..463448,464172..464376,464485..464649,464912..465156,465419..465550,465633..465860,466003..466177,466568..466662,466910..467059,467176..467316,467548..467676,468452..468583,468783..468917,468992..469121,469603..469729,469917..470068,470183..470307,470469..470840,471871..472060,472419..472623,473176..473368,473902..474027,474113..474241,475074..475193,475802..475915,476284..476433,476683..476820,477301..477417,477602..477730,477806..477928,478327..478467,478554..478741,479224..479407,479586..479671,479917..480036,480571..480758,481150..481355,481549..481737,481914..482062,482467..482560,482839..482955,483047..483166,483596..483718,484518..484643,485460..485576,487225..487331,487502..487634,487976..488095,488534..488656,488909..489052,489130..489264,489443..489562,489929..490200,490288..490466,490705..490811,491004..491120,491203..491379,491764..491904,492006..492179,492270..492431,492765..492939,493277..493381,493572..493636,493868..493955,494037..494181,494855..495156)
location: region:416475-495156:1
so has part: feature:416475-416582:1:exon
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so has part: feature:482839-482955:1:exon
so has part: feature:483047-483166:1:exon
so has part: feature:483596-483718:1:exon

position:416475:1
position: 416475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416475-416582:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431957-432079:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436672-436809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438421-438540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439766-439894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440039-440302:1:exon

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SIO_000628: feature:453019-453181:1:exon

urn:…
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SIO_000628: feature:454098-454320:1:exon

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urn:…
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SIO_000628: feature:455905-456048:1:exon

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urn:…
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SIO_000628: feature:456582-456762:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:456869-457091:1:exon

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SIO_000628: feature:457238-457427:1:exon

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SIO_000628: feature:458984-459064:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:460017-460067:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:461521-461688:1:exon

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SIO_000628: feature:461931-462113:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:462522-462722:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:462804-463049:1:exon

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urn:…
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SIO_000628: feature:464172-464376:1:exon

urn:…
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SIO_000628: feature:464485-464649:1:exon

urn:…
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SIO_000628: feature:464912-465156:1:exon

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SIO_000628: feature:465633-465860:1:exon

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SIO_000628: feature:466003-466177:1:exon

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SIO_000628: feature:467176-467316:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:467548-467676:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:468452-468583:1:exon

urn:…
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SIO_000628: feature:468783-468917:1:exon

urn:…
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SIO_000628: feature:470469-470840:1:exon

urn:…
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SIO_000628: feature:471871-472060:1:exon

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urn:…
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SIO_000628: feature:473176-473368:1:exon

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SIO_000628: feature:473902-474027:1:exon

urn:…
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SIO_000628: feature:474113-474241:1:exon

urn:…
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SIO_000628: feature:475802-475915:1:exon

urn:…
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urn:…
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SIO_000628: feature:488534-488656:1:exon

position:488534:1
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reference: sequence
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urn:…
SIO_000300: 74
SIO_000628: feature:488909-489052:1:exon

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position:490200:1
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reference: sequence
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urn:…
SIO_000300: 78
SIO_000628: feature:490288-490466:1:exon

position:490288:1
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reference: sequence
type: ForwardStrandPosition
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position:490466:1
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reference: sequence
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urn:…
SIO_000300: 79
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urn:…
SIO_000300: 80
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position:491004:1
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reference: sequence
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position:491120:1
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reference: sequence
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urn:…
SIO_000300: 81
SIO_000628: feature:491203-491379:1:exon

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reference: sequence
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position:491379:1
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urn:…
SIO_000300: 82
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reference: sequence
type: ForwardStrandPosition
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position:491904:1
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urn:…
SIO_000300: 83
SIO_000628: feature:492006-492179:1:exon

position:492006:1
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reference: sequence
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position:492179:1
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reference: sequence
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urn:…
SIO_000300: 84
SIO_000628: feature:492270-492431:1:exon

position:492270:1
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position:492431:1
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LRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LRP1
product: LDL receptor related protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_032093859.1
SIO_010081: LRP1
subclass of: SO_0000673
so part of: LRP1
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LRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LRP1
product: LDL receptor related protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 129 samples with support for all annotated introns
transcript id: XM_032093860.1
SIO_010081: LRP1
subclass of: SO_0000673
so part of: LRP1
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LRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LRP1
product: LDL receptor related protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 129 samples with support for all annotated introns
transcript id: XM_032093861.1
SIO_010081: LRP1
subclass of: SO_0000673
so part of: LRP1
location: join(416475..416582,431957..432079,436672..436809,438421..438540,439766..439894,440039..440302,453019..453181,454098..454320,454585..454774,455905..456048,456205..456441,456582..456762,456869..457091,457238..457427,457771..457896,457990..458130,458399..458524,458762..458878,458984..459064,461521..461688,461931..462113,462522..462722,462804..463049,463251..463448,464172..464376,464485..464649,464912..465156,465419..465550,465633..465860,466003..466177,466568..466662,466910..467059,467176..467316,467548..467676,468452..468583,468783..468917,468992..469121,469603..469729,469917..470068,470183..470307,470469..470840,471871..472060,472419..472623,473176..473368,473902..474027,474113..474241,475074..475193,475802..475915,476284..476433,476686..476820,477301..477417,477602..477730,477806..477928,478327..478467,478554..478741,479224..479407,479586..479671,479917..480036,480571..480758,481150..481355,481549..481737,481914..482062,482467..482560,482839..482955,483047..483166,483596..483718,484518..484643,485460..485576,487225..487331,487502..487634,487976..488095,488534..488656,488909..489052,489130..489264,489443..489562,489929..490200,490288..490466,490705..490811,491004..491120,491203..491379,491764..491904,492006..492179,492270..492431,492765..492939,493277..493381,493572..493636,493868..493955,494037..494181,494855..495156)
location: region:416475-495156:1
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