Corvus moneduloides isolate bCorMon1 chromosome 29, bCorMon1.pri, whole genome shotgun sequence.
type: Entry
definition: Corvus moneduloides isolate bCorMon1 chromosome 29, bCorMon1.pri, whole genome shotgun sequence.
sequence version: NC_045504.1
sequence date: 2020-01-23
sequence: sequence
division: CON
label: NC_045504.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA599199
dblink: SAMN12368441
keyword: WGS
keyword: RefSeq
source: Corvus moneduloides (New Caledonian crow)
organism: Corvus moneduloides
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM018835.1.\nAssembly name: bCorMon1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/11/14. The original whole-genome shotgun project has the\naccession WHPO00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n + Arrow v. 6.0.0.47841; purge_dups v.\n github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Bionano solve v. 3.2.1_04122018; Salsa\n HiC v. 2.2; Arrow polishing + gap filling\n v. SMRTlink_6.0.0.47841; longranger\n alignment v. 2.2.2; freebayes polishing\n v. 1.3.1; gEVAL manual curation v. 26 SEP\n 2019; VGP assembly pipeline v. 1.6\nAssembly Name :: bCorMon1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.08x\nSequencing Technology :: PacBio Sequel I; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus moneduloides Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 3332324
topology: linear
so has quality: SO_0000987
location: 1..3332324
location: region:1-3332324:1
RO_0002162: 1196302

NC_045504
type: RefSeq
SIO_000068: refseq

PRJNA599199
type: BioProject
SIO_000068: bioproject

SAMN12368441
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3332324:1
position: 3332324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-3332324:1:source
so part of: sequence
organism: Corvus moneduloides
mol type: genomic DNA
isolate: bCorMon1
chromosome: 29
sex: female
tissue type: blood
country: New Caledonia: near Bourail
lat lon: 21.599296 S 165.398128 E
collection date: 17-Oct-2018
collected by: Matthew Steele

1196302
type: Taxonomy
SIO_000068: taxonomy

LOC116436572
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 18870..23970
location: region:18870-23970:1
so has part: feature:18870-23970:1:exon
subclass of: SO_0000010

116436572
type: Gene
SIO_000068: ncbigene

position:18870:1
position: 18870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23970:1
position: 23970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18870-23970:1:exon

LOC116436572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436572
product: uncharacterized LOC116436572
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093798.1
SIO_010081: LOC116436572
subclass of: SO_0000673
so part of: LOC116436572
location: join(18870..19094,19278..19426,19683..19830,20039..20226,20309..20446,20721..20837,21009..21146,21387..21563,22130..22285,22445..22546,22926..23028,23302..23358,23669..23970)
location: region:18870-23970:1
so has part: feature:18870-19094:1:exon
so has part: feature:19278-19426:1:exon
so has part: feature:19683-19830:1:exon
so has part: feature:20039-20226:1:exon
so has part: feature:20309-20446:1:exon
so has part: feature:20721-20837:1:exon
so has part: feature:21009-21146:1:exon
so has part: feature:21387-21563:1:exon
so has part: feature:22130-22285:1:exon
so has part: feature:22445-22546:1:exon
so has part: feature:22926-23028:1:exon
so has part: feature:23302-23358:1:exon
so has part: feature:23669-23970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18870-19094:1:exon

position:19094:1
position: 19094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19278-19426:1:exon

position:19278:1
position: 19278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19426:1
position: 19426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19683-19830:1:exon

position:19683:1
position: 19683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19830:1
position: 19830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:20039-20226:1:exon

position:20039:1
position: 20039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20226:1
position: 20226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20309-20446:1:exon

position:20309:1
position: 20309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20446:1
position: 20446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:20721-20837:1:exon

position:20721:1
position: 20721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20837:1
position: 20837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:21009-21146:1:exon

position:21009:1
position: 21009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21146:1
position: 21146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:21387-21563:1:exon

position:21387:1
position: 21387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21563:1
position: 21563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:22130-22285:1:exon

position:22130:1
position: 22130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22285:1
position: 22285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:22445-22546:1:exon

position:22445:1
position: 22445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22546:1
position: 22546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:22926-23028:1:exon

position:22926:1
position: 22926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23028:1
position: 23028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:23302-23358:1:exon

position:23302:1
position: 23302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23358:1
position: 23358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:23669-23970:1:exon

position:23669:1
position: 23669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436572
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:23791..23793,aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC116436572
translation: MAGTEGHVHHKHQHRETQGIPNTDTTPIPTGIHAPSLDFFEESAVSSQQQVPAMVRNIHQSLGSHVTVGARLGFNILRLAEEHPADVVLTLLRCAPSCDRAATMMWRLLGLSGSTLEKVLPTLLCVMEDWPLHSMCTSDGDDTPVLALAATLGLWVIVQVPWCHEAVNLYSSRIFVALLSHVVITTQQMPEEVDHFWRACREEHRLPTNPNRFAVQAMKALLCRLRCDNEVVAMERKRGWDTLLCADTQHYAVGLLAREMRRVSLPMCLGIALRLLGLLSREEPRWDLPFLAFLVEVLECLDLRECGDSILEMMSRYLLSECRQRCRLALRGLVVLSKDPAMARRMGSLSQRLVELLGDTDGEVVRMSLSVFMNVLENKDILVSSTTAPKLAEALLPLFDNDNSHVQLLSIHLFSKVMELVVDEGKKPLKTIVNQSLYPLVIYWDDENWRVAKASRETLICAAKFLKRRDLEQLLKKEQRLKFAERLLAEDRSRAAERLHQALPFVESPQESLREAAVRFMGAARVFLRGHKEELQLLSEAIQAPRNDAGPSCSNQEIQAHFDQTAEEGSSSGSREPVSQEXHQKITKRTSSPNAAGAPGTADAGHS
SIO_010081: LOC116436572
subclass of: SO_0000673
so part of: LOC116436572
location: join(18945..19094,19278..19426,19683..19830,20039..20226,20309..20446,20721..20837,21009..21146,21387..21563,22130..22285,22445..22546,22926..23028,23302..23358,23669..23871)
location: region:18945-23871:1
so has part: feature:18945-19094:1:exon
so has part: feature:19278-19426:1:exon
so has part: feature:19683-19830:1:exon
so has part: feature:20039-20226:1:exon
so has part: feature:20309-20446:1:exon
so has part: feature:20721-20837:1:exon
so has part: feature:21009-21146:1:exon
so has part: feature:21387-21563:1:exon
so has part: feature:22130-22285:1:exon
so has part: feature:22445-22546:1:exon
so has part: feature:22926-23028:1:exon
so has part: feature:23302-23358:1:exon
so has part: feature:23669-23871:1:exon

XP_031949689.1
type: Protein
SIO_000068: ncbiprotein

position:18945:1
position: 18945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23871:1
position: 23871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18945-19094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19278-19426:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19683-19830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20039-20226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20309-20446:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20721-20837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21009-21146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21387-21563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22130-22285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22445-22546:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22926-23028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23302-23358:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:23669-23871:1:exon

LOC116436416
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 41114..46385
location: region:41114-46385:1
so has part: feature:41114-46385:1:exon
subclass of: SO_0000010

116436416
type: Gene
SIO_000068: ncbigene

position:41114:1
position: 41114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46385:1
position: 46385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41114-46385:1:exon

LOC116436416
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436416
product: translocon-associated protein subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 36 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 138 samples with support for all annotated introns
transcript id: XM_032093526.1
SIO_010081: LOC116436416
subclass of: SO_0000673
so part of: LOC116436416
location: join(41114..41213,42998..43152,43972..44070,44434..44542,44702..44779,45462..46385)
location: region:41114-46385:1
so has part: feature:41114-41213:1:exon
so has part: feature:42998-43152:1:exon
so has part: feature:43972-44070:1:exon
so has part: feature:44434-44542:1:exon
so has part: feature:44702-44779:1:exon
so has part: feature:45462-46385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41114-41213:1:exon

position:41213:1
position: 41213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42998-43152:1:exon

position:42998:1
position: 42998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43152:1
position: 43152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:43972-44070:1:exon

position:43972:1
position: 43972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44070:1
position: 44070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:44434-44542:1:exon

position:44434:1
position: 44434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44542:1
position: 44542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44702-44779:1:exon

position:44702:1
position: 44702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44779:1
position: 44779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:45462-46385:1:exon

position:45462:1
position: 45462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436416
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436416
product: translocon-associated protein subunit beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 35 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_032093528.1
SIO_010081: LOC116436416
subclass of: SO_0000673
so part of: LOC116436416
location: join(41335..41359,42998..43152,43972..44070,44434..44542,44702..44779,45462..46385)
location: region:41335-46385:1
so has part: feature:41335-41359:1:exon
so has part: feature:42998-43152:1:exon
so has part: feature:43972-44070:1:exon
so has part: feature:44434-44542:1:exon
so has part: feature:44702-44779:1:exon
so has part: feature:45462-46385:1:exon

position:41335:1
position: 41335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41335-41359:1:exon

position:41359:1
position: 41359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42998-43152:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43972-44070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44434-44542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44702-44779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45462-46385:1:exon

LOC116436416
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436416
product: translocon-associated protein subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 35 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_032093527.1
SIO_010081: LOC116436416
subclass of: SO_0000673
so part of: LOC116436416
location: join(41369..41393,42998..43152,43972..44070,44434..44542,44702..44779,45462..46385)
location: region:41369-46385:1
so has part: feature:41369-41393:1:exon
so has part: feature:42998-43152:1:exon
so has part: feature:43972-44070:1:exon
so has part: feature:44434-44542:1:exon
so has part: feature:44702-44779:1:exon
so has part: feature:45462-46385:1:exon

position:41369:1
position: 41369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41369-41393:1:exon

position:41393:1
position: 41393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:42998-43152:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43972-44070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44434-44542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44702-44779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45462-46385:1:exon

LOC116436416
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta
translation: MKLLLLAVFALVSVAHCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEGAQVVVGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN
SIO_010081: LOC116436416
subclass of: SO_0000673
so part of: LOC116436416
location: join(42998..43152,43972..44070,44434..44542,44702..44779,45462..45572)
location: region:42998-45572:1
so has part: feature:42998-43152:1:exon
so has part: feature:43972-44070:1:exon
so has part: feature:44434-44542:1:exon
so has part: feature:44702-44779:1:exon
so has part: feature:45462-45572:1:exon

XP_031949417.1
type: Protein
SIO_000068: ncbiprotein

position:45572:1
position: 45572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42998-43152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43972-44070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44434-44542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44702-44779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45462-45572:1:exon

LOC116436416
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta
translation: MKLLLLAVFALVSVAHCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEGAQVVVGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN
SIO_010081: LOC116436416
subclass of: SO_0000673
so part of: LOC116436416
location: join(42998..43152,43972..44070,44434..44542,44702..44779,45462..45572)
location: region:42998-45572:1
so has part: feature:42998-43152:1:exon
so has part: feature:43972-44070:1:exon
so has part: feature:44434-44542:1:exon
so has part: feature:44702-44779:1:exon
so has part: feature:45462-45572:1:exon

XP_031949418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42998-43152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43972-44070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44434-44542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44702-44779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45462-45572:1:exon

LOC116436416
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta
translation: MKLLLLAVFALVSVAHCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEGAQVVVGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN
SIO_010081: LOC116436416
subclass of: SO_0000673
so part of: LOC116436416
location: join(42998..43152,43972..44070,44434..44542,44702..44779,45462..45572)
location: region:42998-45572:1
so has part: feature:42998-43152:1:exon
so has part: feature:43972-44070:1:exon
so has part: feature:44434-44542:1:exon
so has part: feature:44702-44779:1:exon
so has part: feature:45462-45572:1:exon

XP_031949419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42998-43152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43972-44070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44434-44542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44702-44779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45462-45572:1:exon

CCT3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(47290..55632)
location: region:47290-55632:-1
so has part: feature:47290-55632:-1:exon
subclass of: SO_0000010

116436414
type: Gene
SIO_000068: ncbigene

position:47290:-1
position: 47290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55632:-1
position: 55632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47290-55632:-1:exon

CCT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CCT3
product: chaperonin containing TCP1 subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_032093523.1
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: complement(join(47290..47644,48314..48445,48697..48942,49439..49619,49738..49819,50320..50452,50889..51038,51523..51709,51893..52010,52365..52461,53050..53112,53209..53259,53764..53825,55474..55632))
location: region:47290-55632:-1
so has part: feature:55474-55632:-1:exon
so has part: feature:53764-53825:-1:exon
so has part: feature:53209-53259:-1:exon
so has part: feature:53050-53112:-1:exon
so has part: feature:52365-52461:-1:exon
so has part: feature:51893-52010:-1:exon
so has part: feature:51523-51709:-1:exon
so has part: feature:50889-51038:-1:exon
so has part: feature:50320-50452:-1:exon
so has part: feature:49738-49819:-1:exon
so has part: feature:49439-49619:-1:exon
so has part: feature:48697-48942:-1:exon
so has part: feature:48314-48445:-1:exon
so has part: feature:47290-47644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55474-55632:-1:exon

position:55474:-1
position: 55474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53764-53825:-1:exon

position:53764:-1
position: 53764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53825:-1
position: 53825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53209-53259:-1:exon

position:53209:-1
position: 53209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53259:-1
position: 53259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:53050-53112:-1:exon

position:53050:-1
position: 53050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53112:-1
position: 53112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:52365-52461:-1:exon

position:52365:-1
position: 52365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52461:-1
position: 52461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51893-52010:-1:exon

position:51893:-1
position: 51893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52010:-1
position: 52010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:51523-51709:-1:exon

position:51523:-1
position: 51523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51709:-1
position: 51709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:50889-51038:-1:exon

position:50889:-1
position: 50889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51038:-1
position: 51038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:50320-50452:-1:exon

position:50320:-1
position: 50320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50452:-1
position: 50452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:49738-49819:-1:exon

position:49738:-1
position: 49738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49819:-1
position: 49819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:49439-49619:-1:exon

position:49439:-1
position: 49439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49619:-1
position: 49619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:48697-48942:-1:exon

position:48697:-1
position: 48697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48942:-1
position: 48942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:48314-48445:-1:exon

position:48314:-1
position: 48314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48445:-1
position: 48445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:47290-47644:-1:exon

position:47644:-1
position: 47644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit gamma
translation: MMGPRPVLVLSQNTKRESGRKVQTGNITAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVIIWAYRKALDDMISILKKIGTPVDVNNKEMMLKIIKSAINTKAINRWSDLACSIALDAVKTVEFEENGRKEIDIKKYAKVEKIPGGFSEDSCVLRGIMVNKDVTHPRMRRLIKNPRIVLLDCSLEYKKGESQTDIEITREEDFARILQMEEEYIQQMCEDLIRVKPDLVITEKGVSDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRTDELREEDVGTGARLFEVKKIGDEYFAFITDCKDPKACTIILRGASKEILAEVERNLQDAMQVCRNVLMDPQLVPGGGATEMAVSHALTERSKGMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRVLTSLRAKHTQEGSQTWGVNGETGALVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDNQSKQAAAPEAAQE
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: complement(join(47540..47644,48314..48445,48697..48942,49439..49619,49738..49819,50320..50452,50889..51038,51523..51709,51893..52010,52365..52461,53050..53112,53209..53259,53764..53825,55474..55504))
location: region:47540-55504:-1
so has part: feature:55474-55504:-1:exon
so has part: feature:53764-53825:-1:exon
so has part: feature:53209-53259:-1:exon
so has part: feature:53050-53112:-1:exon
so has part: feature:52365-52461:-1:exon
so has part: feature:51893-52010:-1:exon
so has part: feature:51523-51709:-1:exon
so has part: feature:50889-51038:-1:exon
so has part: feature:50320-50452:-1:exon
so has part: feature:49738-49819:-1:exon
so has part: feature:49439-49619:-1:exon
so has part: feature:48697-48942:-1:exon
so has part: feature:48314-48445:-1:exon
so has part: feature:47540-47644:-1:exon

XP_031949414.1
type: Protein
SIO_000068: ncbiprotein

position:47540:-1
position: 47540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55504:-1
position: 55504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55474-55504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53764-53825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53209-53259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53050-53112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52365-52461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51893-52010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:51523-51709:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50889-51038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:50320-50452:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49738-49819:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:49439-49619:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48697-48942:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:48314-48445:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:47540-47644:-1:exon

LOC116436415
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436415
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(56669..61335)
location: region:56669-61335:-1
so has part: feature:56669-61335:-1:exon
subclass of: SO_0000010

116436415
type: Gene
SIO_000068: ncbigene

position:56669:-1
position: 56669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61335:-1
position: 61335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56669-61335:-1:exon

LOC116436415
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436415
product: translocon-associated protein subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 138 samples with support for all annotated introns
transcript id: XM_032093524.1
SIO_010081: LOC116436415
subclass of: SO_0000673
so part of: LOC116436415
location: complement(join(56669..56995,57678..57755,57915..58023,58387..58485,59305..59459,61236..61335))
location: region:56669-61335:-1
so has part: feature:61236-61335:-1:exon
so has part: feature:59305-59459:-1:exon
so has part: feature:58387-58485:-1:exon
so has part: feature:57915-58023:-1:exon
so has part: feature:57678-57755:-1:exon
so has part: feature:56669-56995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61236-61335:-1:exon

position:61236:-1
position: 61236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59305-59459:-1:exon

position:59305:-1
position: 59305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59459:-1
position: 59459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58387-58485:-1:exon

position:58387:-1
position: 58387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58485:-1
position: 58485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57915-58023:-1:exon

position:57915:-1
position: 57915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58023:-1
position: 58023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:57678-57755:-1:exon

position:57678:-1
position: 57678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57755:-1
position: 57755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:56669-56995:-1:exon

position:56995:-1
position: 56995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436415
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436415
product: translocon-associated protein subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_032093525.1
SIO_010081: LOC116436415
subclass of: SO_0000673
so part of: LOC116436415
location: complement(join(56669..56995,57678..57755,57915..58023,58387..58485,59305..59459,61056..61080))
location: region:56669-61080:-1
so has part: feature:61056-61080:-1:exon
so has part: feature:59305-59459:-1:exon
so has part: feature:58387-58485:-1:exon
so has part: feature:57915-58023:-1:exon
so has part: feature:57678-57755:-1:exon
so has part: feature:56669-56995:-1:exon

position:61080:-1
position: 61080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61056-61080:-1:exon

position:61056:-1
position: 61056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59305-59459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58387-58485:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57915-58023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57678-57755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56669-56995:-1:exon

LOC116436415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436415
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta
translation: MKLLLLAVFALVSVAHCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEGAQVVVGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN
SIO_010081: LOC116436415
subclass of: SO_0000673
so part of: LOC116436415
location: complement(join(56885..56995,57678..57755,57915..58023,58387..58485,59305..59459))
location: region:56885-59459:-1
so has part: feature:59305-59459:-1:exon
so has part: feature:58387-58485:-1:exon
so has part: feature:57915-58023:-1:exon
so has part: feature:57678-57755:-1:exon
so has part: feature:56885-56995:-1:exon

XP_031949415.1
type: Protein
SIO_000068: ncbiprotein

position:56885:-1
position: 56885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59305-59459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58387-58485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57915-58023:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57678-57755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56885-56995:-1:exon

LOC116436415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436415
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit beta
translation: MKLLLLAVFALVSVAHCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEGAQVVVGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKTKKN
SIO_010081: LOC116436415
subclass of: SO_0000673
so part of: LOC116436415
location: complement(join(56885..56995,57678..57755,57915..58023,58387..58485,59305..59459))
location: region:56885-59459:-1
so has part: feature:59305-59459:-1:exon
so has part: feature:58387-58485:-1:exon
so has part: feature:57915-58023:-1:exon
so has part: feature:57678-57755:-1:exon
so has part: feature:56885-56995:-1:exon

XP_031949416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59305-59459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58387-58485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57915-58023:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57678-57755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56885-56995:-1:exon

LOC116436534
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 75684..76854
location: region:75684-76854:1
so has part: feature:75684-76854:1:exon
subclass of: SO_0000010

116436534
type: Gene
SIO_000068: ncbigene

position:75684:1
position: 75684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76854:1
position: 76854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75684-76854:1:exon

LOC116436534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436534
product: DC-STAMP domain-containing protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032093722.1
SIO_010081: LOC116436534
subclass of: SO_0000673
so part of: LOC116436534
location: join(75684..76198,76273..76366,76461..76854)
location: region:75684-76854:1
so has part: feature:75684-76198:1:exon
so has part: feature:76273-76366:1:exon
so has part: feature:76461-76854:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75684-76198:1:exon

position:76198:1
position: 76198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:76273-76366:1:exon

position:76273:1
position: 76273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76366:1
position: 76366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76461-76854:1:exon

position:76461:1
position: 76461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116436534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DC-STAMP domain-containing protein 2-like
translation: MALTPRASSRAHESPALTCLARFVGIQRKHCLTCGAAEQPGFSACLTPGCKGLYCSECYAALNNTCSVCMAPLSYPDSGDEEMDSSDEETPGLWLGAVRSPRGQERGRLLRQRIKDMIKGWRLPFRTATRV
SIO_010081: LOC116436534
subclass of: SO_0000673
so part of: LOC116436534
location: join(76045..76198,76273..76366,76461..76608)
location: region:76045-76608:1
so has part: feature:76045-76198:1:exon
so has part: feature:76273-76366:1:exon
so has part: feature:76461-76608:1:exon

XP_031949613.1
type: Protein
SIO_000068: ncbiprotein

position:76045:1
position: 76045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76608:1
position: 76608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76045-76198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76273-76366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76461-76608:1:exon

ZBTB7B
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(77408..91387)
location: region:77408-91387:-1
so has part: feature:77408-91387:-1:exon
subclass of: SO_0000010

116436490
type: Gene
SIO_000068: ncbigene

position:77408:-1
position: 77408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91387:-1
position: 91387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77408-91387:-1:exon

ZBTB7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZBTB7B
product: zinc finger and BTB domain containing 7B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032093647.1
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(77408..78823,79589..80592,91057..91289))
location: region:77408-91289:-1
so has part: feature:91057-91289:-1:exon
so has part: feature:79589-80592:-1:exon
so has part: feature:77408-78823:-1:exon

position:91289:-1
position: 91289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91057-91289:-1:exon

position:91057:-1
position: 91057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79589-80592:-1:exon

position:79589:-1
position: 79589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80592:-1
position: 80592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:77408-78823:-1:exon

position:78823:-1
position: 78823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZBTB7B
product: zinc finger and BTB domain containing 7B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_032093650.1
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(77408..78823,79589..80592,89928..90015))
location: region:77408-90015:-1
so has part: feature:89928-90015:-1:exon
so has part: feature:79589-80592:-1:exon
so has part: feature:77408-78823:-1:exon

position:90015:-1
position: 90015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89928-90015:-1:exon

position:89928:-1
position: 89928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79589-80592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77408-78823:-1:exon

ZBTB7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZBTB7B
product: zinc finger and BTB domain containing 7B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_032093649.1
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(77408..78823,79589..80592,89806..89920))
location: region:77408-89920:-1
so has part: feature:89806-89920:-1:exon
so has part: feature:79589-80592:-1:exon
so has part: feature:77408-78823:-1:exon

position:89920:-1
position: 89920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89806-89920:-1:exon

position:89806:-1
position: 89806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79589-80592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77408-78823:-1:exon

ZBTB7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZBTB7B
product: zinc finger and BTB domain containing 7B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_032093648.1
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(77408..78823,79589..80592,84756..85158))
location: region:77408-85158:-1
so has part: feature:84756-85158:-1:exon
so has part: feature:79589-80592:-1:exon
so has part: feature:77408-78823:-1:exon

position:85158:-1
position: 85158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84756-85158:-1:exon

position:84756:-1
position: 84756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79589-80592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77408-78823:-1:exon

ZBTB7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZBTB7B
product: zinc finger and BTB domain containing 7B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 135 samples with support for all annotated introns
transcript id: XM_032093646.1
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(77408..78823,79589..84554))
location: region:77408-84554:-1
so has part: feature:79589-84554:-1:exon
so has part: feature:77408-78823:-1:exon

position:84554:-1
position: 84554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79589-84554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77408-78823:-1:exon

ZBTB7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZBTB7B
product: zinc finger and BTB domain containing 7B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032093651.1
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(77411..78823,79589..80592,91305..91387))
location: region:77411-91387:-1
so has part: feature:91305-91387:-1:exon
so has part: feature:79589-80592:-1:exon
so has part: feature:77411-78823:-1:exon

position:77411:-1
position: 77411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91305-91387:-1:exon

position:91305:-1
position: 91305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79589-80592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77411-78823:-1:exon

ZBTB7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B isoform X2
translation: MQVRTMASPEDDLIGIPFPEHSSELLSCLNEQRQLGLLCDVTIKTQGLEYRTHRAVLAASSRYFKKLFAGPGPGQEVCELDFVGPEALGALLEFAYTATLTISSANMGEVLRAARLLEIPCVIAACVEILQGSGLEAPGPDDGDCERARRYLEAFSALPEGEVPAPPPPRPTARRSKKTRKFLQARGARLNNHAEEPPTEAEGSGSPLPPPQLPSPPLPEGLPLPYDSFELPEEEELPPHPFPFPYQPPLSPDEAASDDDAIDPDLMAYLSSLHHESLAPGLDSPDKLVRKRRSQMPQECPVCHKVIHGAGKLPRHMRTHTGEKPFACQICGVRFTRNDKLKIHMRKHTGERPYSCQHCSARFLHSYDLKNHMHLHTGARPYECYLCHKAFAKDDHLQRHLKGQNCLEVRTRRRRRDEPPPPPAGTPGLDLSNGRLEGLRLSIARYWPPGQPEEEEEEPEGEEGPQPDGAVPVETA
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(78403..78823,79589..80592,91057..91062))
location: region:78403-91062:-1
so has part: feature:91057-91062:-1:exon
so has part: feature:79589-80592:-1:exon
so has part: feature:78403-78823:-1:exon

XP_031949538.1
type: Protein
SIO_000068: ncbiprotein

position:78403:-1
position: 78403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91062:-1
position: 91062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91057-91062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79589-80592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78403-78823:-1:exon

ZBTB7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B isoform X1
translation: MYMEGSLCPGFVTAMLQLQCFFQVLSPRLFLYQSGSILSFLQVRTMASPEDDLIGIPFPEHSSELLSCLNEQRQLGLLCDVTIKTQGLEYRTHRAVLAASSRYFKKLFAGPGPGQEVCELDFVGPEALGALLEFAYTATLTISSANMGEVLRAARLLEIPCVIAACVEILQGSGLEAPGPDDGDCERARRYLEAFSALPEGEVPAPPPPRPTARRSKKTRKFLQARGARLNNHAEEPPTEAEGSGSPLPPPQLPSPPLPEGLPLPYDSFELPEEEELPPHPFPFPYQPPLSPDEAASDDDAIDPDLMAYLSSLHHESLAPGLDSPDKLVRKRRSQMPQECPVCHKVIHGAGKLPRHMRTHTGEKPFACQICGVRFTRNDKLKIHMRKHTGERPYSCQHCSARFLHSYDLKNHMHLHTGARPYECYLCHKAFAKDDHLQRHLKGQNCLEVRTRRRRRDEPPPPPAGTPGLDLSNGRLEGLRLSIARYWPPGQPEEEEEEPEGEEGPQPDGAVPVETA
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(78403..78823,79589..80718))
location: region:78403-80718:-1
so has part: feature:79589-80718:-1:exon
so has part: feature:78403-78823:-1:exon

XP_031949537.1
type: Protein
SIO_000068: ncbiprotein

position:80718:-1
position: 80718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79589-80718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78403-78823:-1:exon

ZBTB7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B isoform X3
translation: MASPEDDLIGIPFPEHSSELLSCLNEQRQLGLLCDVTIKTQGLEYRTHRAVLAASSRYFKKLFAGPGPGQEVCELDFVGPEALGALLEFAYTATLTISSANMGEVLRAARLLEIPCVIAACVEILQGSGLEAPGPDDGDCERARRYLEAFSALPEGEVPAPPPPRPTARRSKKTRKFLQARGARLNNHAEEPPTEAEGSGSPLPPPQLPSPPLPEGLPLPYDSFELPEEEELPPHPFPFPYQPPLSPDEAASDDDAIDPDLMAYLSSLHHESLAPGLDSPDKLVRKRRSQMPQECPVCHKVIHGAGKLPRHMRTHTGEKPFACQICGVRFTRNDKLKIHMRKHTGERPYSCQHCSARFLHSYDLKNHMHLHTGARPYECYLCHKAFAKDDHLQRHLKGQNCLEVRTRRRRRDEPPPPPAGTPGLDLSNGRLEGLRLSIARYWPPGQPEEEEEEPEGEEGPQPDGAVPVETA
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(78403..78823,79589..80583))
location: region:78403-80583:-1
so has part: feature:79589-80583:-1:exon
so has part: feature:78403-78823:-1:exon

XP_031949539.1
type: Protein
SIO_000068: ncbiprotein

position:80583:-1
position: 80583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79589-80583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78403-78823:-1:exon

ZBTB7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B isoform X3
translation: MASPEDDLIGIPFPEHSSELLSCLNEQRQLGLLCDVTIKTQGLEYRTHRAVLAASSRYFKKLFAGPGPGQEVCELDFVGPEALGALLEFAYTATLTISSANMGEVLRAARLLEIPCVIAACVEILQGSGLEAPGPDDGDCERARRYLEAFSALPEGEVPAPPPPRPTARRSKKTRKFLQARGARLNNHAEEPPTEAEGSGSPLPPPQLPSPPLPEGLPLPYDSFELPEEEELPPHPFPFPYQPPLSPDEAASDDDAIDPDLMAYLSSLHHESLAPGLDSPDKLVRKRRSQMPQECPVCHKVIHGAGKLPRHMRTHTGEKPFACQICGVRFTRNDKLKIHMRKHTGERPYSCQHCSARFLHSYDLKNHMHLHTGARPYECYLCHKAFAKDDHLQRHLKGQNCLEVRTRRRRRDEPPPPPAGTPGLDLSNGRLEGLRLSIARYWPPGQPEEEEEEPEGEEGPQPDGAVPVETA
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(78403..78823,79589..80583))
location: region:78403-80583:-1
so has part: feature:79589-80583:-1:exon
so has part: feature:78403-78823:-1:exon

XP_031949540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79589-80583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78403-78823:-1:exon

ZBTB7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B isoform X3
translation: MASPEDDLIGIPFPEHSSELLSCLNEQRQLGLLCDVTIKTQGLEYRTHRAVLAASSRYFKKLFAGPGPGQEVCELDFVGPEALGALLEFAYTATLTISSANMGEVLRAARLLEIPCVIAACVEILQGSGLEAPGPDDGDCERARRYLEAFSALPEGEVPAPPPPRPTARRSKKTRKFLQARGARLNNHAEEPPTEAEGSGSPLPPPQLPSPPLPEGLPLPYDSFELPEEEELPPHPFPFPYQPPLSPDEAASDDDAIDPDLMAYLSSLHHESLAPGLDSPDKLVRKRRSQMPQECPVCHKVIHGAGKLPRHMRTHTGEKPFACQICGVRFTRNDKLKIHMRKHTGERPYSCQHCSARFLHSYDLKNHMHLHTGARPYECYLCHKAFAKDDHLQRHLKGQNCLEVRTRRRRRDEPPPPPAGTPGLDLSNGRLEGLRLSIARYWPPGQPEEEEEEPEGEEGPQPDGAVPVETA
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(78403..78823,79589..80583))
location: region:78403-80583:-1
so has part: feature:79589-80583:-1:exon
so has part: feature:78403-78823:-1:exon

XP_031949541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79589-80583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78403-78823:-1:exon

ZBTB7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B isoform X3
translation: MASPEDDLIGIPFPEHSSELLSCLNEQRQLGLLCDVTIKTQGLEYRTHRAVLAASSRYFKKLFAGPGPGQEVCELDFVGPEALGALLEFAYTATLTISSANMGEVLRAARLLEIPCVIAACVEILQGSGLEAPGPDDGDCERARRYLEAFSALPEGEVPAPPPPRPTARRSKKTRKFLQARGARLNNHAEEPPTEAEGSGSPLPPPQLPSPPLPEGLPLPYDSFELPEEEELPPHPFPFPYQPPLSPDEAASDDDAIDPDLMAYLSSLHHESLAPGLDSPDKLVRKRRSQMPQECPVCHKVIHGAGKLPRHMRTHTGEKPFACQICGVRFTRNDKLKIHMRKHTGERPYSCQHCSARFLHSYDLKNHMHLHTGARPYECYLCHKAFAKDDHLQRHLKGQNCLEVRTRRRRRDEPPPPPAGTPGLDLSNGRLEGLRLSIARYWPPGQPEEEEEEPEGEEGPQPDGAVPVETA
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(78403..78823,79589..80583))
location: region:78403-80583:-1
so has part: feature:79589-80583:-1:exon
so has part: feature:78403-78823:-1:exon

XP_031949542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:79589-80583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78403-78823:-1:exon

LOC116436492
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(91482..95406)
location: region:91482-95406:-1
so has part: feature:91482-95406:-1:exon
subclass of: SO_0000010

116436492
type: Gene
SIO_000068: ncbigene

position:91482:-1
position: 91482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95406:-1
position: 95406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91482-95406:-1:exon

LOC116436492
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436492
product: mothers against decapentaplegic homolog 6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_032093653.1
SIO_010081: LOC116436492
subclass of: SO_0000673
so part of: LOC116436492
location: complement(join(91482..92758,93394..93492,93636..94049,94412..95406))
location: region:91482-95406:-1
so has part: feature:94412-95406:-1:exon
so has part: feature:93636-94049:-1:exon
so has part: feature:93394-93492:-1:exon
so has part: feature:91482-92758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94412-95406:-1:exon

position:94412:-1
position: 94412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93636-94049:-1:exon

position:93636:-1
position: 93636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94049:-1
position: 94049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93394-93492:-1:exon

position:93394:-1
position: 93394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93492:-1
position: 93492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91482-92758:-1:exon

position:92758:-1
position: 92758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436492
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436492
product: mothers against decapentaplegic homolog 6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_032093652.1
SIO_010081: LOC116436492
subclass of: SO_0000673
so part of: LOC116436492
location: complement(join(91482..92758,93379..93492,93636..94049,94412..95406))
location: region:91482-95406:-1
so has part: feature:94412-95406:-1:exon
so has part: feature:93636-94049:-1:exon
so has part: feature:93379-93492:-1:exon
so has part: feature:91482-92758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94412-95406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93636-94049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93379-93492:-1:exon

position:93379:-1
position: 93379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91482-92758:-1:exon

LOC116436492
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 6-like isoform X2
translation: MFRSHRAGLMRRLWRQRCAAASPEDGPSALKLAAHALFKKLKDEELELLVQVVESGGAWESGCVLAPRGDPRGVKQGLSPQVLLCRLFRWPDLHQSHELKHLCYCAGGQGACGDLAVLCCNPHHFSRLAVPETPPPPYLKASCGPSWPDEPQHPSTQLLEFSYNDTSLSWSTIKDGCWCKLAYWEYRTRVGRLYAVHEASVNVFCELPWGSGFCLAQLPAAYRSCAVRRARGKIGRGLLLSREPGGVWAYNRSEHPIFVSSPTLSPPGACGLTVLKVLPGYSAKVFDYEWAGDRGGWQLPGEGPCDPHSIRISFAKGWGPCYSRQFITSCPCWLEVLLNQPC
SIO_010081: LOC116436492
subclass of: SO_0000673
so part of: LOC116436492
location: complement(join(92223..92758,93394..93492,93636..94029))
location: region:92223-94029:-1
so has part: feature:93636-94029:-1:exon
so has part: feature:93394-93492:-1:exon
so has part: feature:92223-92758:-1:exon

XP_031949544.1
type: Protein
SIO_000068: ncbiprotein

position:92223:-1
position: 92223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94029:-1
position: 94029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93636-94029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93394-93492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92223-92758:-1:exon

LOC116436492
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 6-like isoform X1
translation: MFRSHRAGLMRRLWRQRCAAASPEDGPSALKLAAHALFKKLKDEELELLVQVVESGGAWESGCVLAPRGDPRGVKQGLSPQVLLCRLFRWPDLHQSHELKHLCYCAGGQGACGDLAVLCCNPHHFSRLAVPETPPPPYLKASCGPSWPDEPQHPSTQLLEFSYNGGDWCDTSLSWSTIKDGCWCKLAYWEYRTRVGRLYAVHEASVNVFCELPWGSGFCLAQLPAAYRSCAVRRARGKIGRGLLLSREPGGVWAYNRSEHPIFVSSPTLSPPGACGLTVLKVLPGYSAKVFDYEWAGDRGGWQLPGEGPCDPHSIRISFAKGWGPCYSRQFITSCPCWLEVLLNQPC
SIO_010081: LOC116436492
subclass of: SO_0000673
so part of: LOC116436492
location: complement(join(92223..92758,93379..93492,93636..94029))
location: region:92223-94029:-1
so has part: feature:93636-94029:-1:exon
so has part: feature:93379-93492:-1:exon
so has part: feature:92223-92758:-1:exon

XP_031949543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93636-94029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93379-93492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92223-92758:-1:exon

FLAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: FLAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(95524..99363)
location: region:95524-99363:-1
so has part: feature:95524-99363:-1:exon
subclass of: SO_0000010

116436489
type: Gene
SIO_000068: ncbigene

position:95524:-1
position: 95524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99363:-1
position: 99363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95524-99363:-1:exon

FLAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FLAD1
product: flavin adenine dinucleotide synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_032093645.1
SIO_010081: FLAD1
subclass of: SO_0000673
so part of: FLAD1
location: complement(join(95524..95636,96134..96643,96725..96798,97185..97374,97463..97561,97751..97898,98348..99107,99196..99363))
location: region:95524-99363:-1
so has part: feature:99196-99363:-1:exon
so has part: feature:98348-99107:-1:exon
so has part: feature:97751-97898:-1:exon
so has part: feature:97463-97561:-1:exon
so has part: feature:97185-97374:-1:exon
so has part: feature:96725-96798:-1:exon
so has part: feature:96134-96643:-1:exon
so has part: feature:95524-95636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99196-99363:-1:exon

position:99196:-1
position: 99196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98348-99107:-1:exon

position:98348:-1
position: 98348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99107:-1
position: 99107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97751-97898:-1:exon

position:97751:-1
position: 97751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97898:-1
position: 97898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97463-97561:-1:exon

position:97463:-1
position: 97463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97561:-1
position: 97561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:97185-97374:-1:exon

position:97185:-1
position: 97185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97374:-1
position: 97374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:96725-96798:-1:exon

position:96725:-1
position: 96725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96798:-1
position: 96798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:96134-96643:-1:exon

position:96134:-1
position: 96134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96643:-1
position: 96643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:95524-95636:-1:exon

position:95636:-1
position: 95636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FLAD1
product: flavin adenine dinucleotide synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_032093644.1
SIO_010081: FLAD1
subclass of: SO_0000673
so part of: FLAD1
location: complement(join(95524..95636,95932..96643,96725..96798,97185..97374,97463..97561,97751..97898,98348..99107,99196..99363))
location: region:95524-99363:-1
so has part: feature:99196-99363:-1:exon
so has part: feature:98348-99107:-1:exon
so has part: feature:97751-97898:-1:exon
so has part: feature:97463-97561:-1:exon
so has part: feature:97185-97374:-1:exon
so has part: feature:96725-96798:-1:exon
so has part: feature:95932-96643:-1:exon
so has part: feature:95524-95636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99196-99363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98348-99107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97751-97898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97463-97561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97185-97374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96725-96798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95932-96643:-1:exon

position:95932:-1
position: 95932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:95524-95636:-1:exon

FLAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FLAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAD synthase
translation: MWGVLRAALRAAGPVSRPLRAVACRPMAASAAAAVARGSASTAGIIVIGDEILKGHTQDTNSYFMCRRLRALGVRVARISVVPDDVEAIASEVAAFAARFTYVLTSGGIGPTHDDVTFEAVAKAFGERLVPHPELVALVHKFFGKTEVQCPEMKLARVPESSCLNYGTDGHTGSTFKYPLVSVRNVYIFPGIPALMERALDGLAHLFRSKQTHFYSHTIYVASDEMLIAPVLDRADAAFRGRVSLGSYPDWTSNYYRVKLTLDSESEQDLEEAYCFLMRELPPGIAVPLVTDCVSPAAVEVYGLAESGSALGQKVAAALRTIEEALDQYSLVQLCVGFNGGKDCTALLHLVHAAVQRRFPARQERLQVLYIRTVSPFPEMEQFIQATVQRYRVQLCTVEGSIREALAHLKEQQPQLEAVLMGTRRTDPYSCTLTSMCVTDPDWPPYMRVNPLLDWTYRDIWEFLRKLFVPYCILYDKGYTSLGSMANTQKNPALRYTDAQGRESYRPAYELENEEEERTSRQ
SIO_010081: FLAD1
subclass of: SO_0000673
so part of: FLAD1
location: complement(join(96508..96643,96725..96798,97185..97374,97463..97561,97751..97898,98348..99107,99196..99357))
location: region:96508-99357:-1
so has part: feature:99196-99357:-1:exon
so has part: feature:98348-99107:-1:exon
so has part: feature:97751-97898:-1:exon
so has part: feature:97463-97561:-1:exon
so has part: feature:97185-97374:-1:exon
so has part: feature:96725-96798:-1:exon
so has part: feature:96508-96643:-1:exon

XP_031949535.1
type: Protein
SIO_000068: ncbiprotein

position:96508:-1
position: 96508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99357:-1
position: 99357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99196-99357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98348-99107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97751-97898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97463-97561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97185-97374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96725-96798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96508-96643:-1:exon

FLAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FLAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAD synthase
translation: MWGVLRAALRAAGPVSRPLRAVACRPMAASAAAAVARGSASTAGIIVIGDEILKGHTQDTNSYFMCRRLRALGVRVARISVVPDDVEAIASEVAAFAARFTYVLTSGGIGPTHDDVTFEAVAKAFGERLVPHPELVALVHKFFGKTEVQCPEMKLARVPESSCLNYGTDGHTGSTFKYPLVSVRNVYIFPGIPALMERALDGLAHLFRSKQTHFYSHTIYVASDEMLIAPVLDRADAAFRGRVSLGSYPDWTSNYYRVKLTLDSESEQDLEEAYCFLMRELPPGIAVPLVTDCVSPAAVEVYGLAESGSALGQKVAAALRTIEEALDQYSLVQLCVGFNGGKDCTALLHLVHAAVQRRFPARQERLQVLYIRTVSPFPEMEQFIQATVQRYRVQLCTVEGSIREALAHLKEQQPQLEAVLMGTRRTDPYSCTLTSMCVTDPDWPPYMRVNPLLDWTYRDIWEFLRKLFVPYCILYDKGYTSLGSMANTQKNPALRYTDAQGRESYRPAYELENEEEERTSRQ
SIO_010081: FLAD1
subclass of: SO_0000673
so part of: FLAD1
location: complement(join(96508..96643,96725..96798,97185..97374,97463..97561,97751..97898,98348..99107,99196..99357))
location: region:96508-99357:-1
so has part: feature:99196-99357:-1:exon
so has part: feature:98348-99107:-1:exon
so has part: feature:97751-97898:-1:exon
so has part: feature:97463-97561:-1:exon
so has part: feature:97185-97374:-1:exon
so has part: feature:96725-96798:-1:exon
so has part: feature:96508-96643:-1:exon

XP_031949536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99196-99357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98348-99107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97751-97898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97463-97561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97185-97374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96725-96798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96508-96643:-1:exon

CKS1B
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: CKS1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99653..105677)
location: region:99653-105677:-1
so has part: feature:99653-105677:-1:exon
subclass of: SO_0000010

116436493
type: Gene
SIO_000068: ncbigene

position:99653:-1
position: 99653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105677:-1
position: 105677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99653-105677:-1:exon

CKS1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CKS1B
product: CDC28 protein kinase regulatory subunit 1B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
transcript id: XM_032093656.1
SIO_010081: CKS1B
subclass of: SO_0000673
so part of: CKS1B
location: complement(join(99653..99905,99972..100099,100451..100558))
location: region:99653-100558:-1
so has part: feature:100451-100558:-1:exon
so has part: feature:99972-100099:-1:exon
so has part: feature:99653-99905:-1:exon

position:100558:-1
position: 100558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100451-100558:-1:exon

position:100451:-1
position: 100451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99972-100099:-1:exon

position:99972:-1
position: 99972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100099:-1
position: 100099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99653-99905:-1:exon

position:99905:-1
position: 99905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CKS1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CKS1B
product: CDC28 protein kinase regulatory subunit 1B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032093654.1
SIO_010081: CKS1B
subclass of: SO_0000673
so part of: CKS1B
location: complement(join(99655..99905,105112..105677))
location: region:99655-105677:-1
so has part: feature:105112-105677:-1:exon
so has part: feature:99655-99905:-1:exon

position:99655:-1
position: 99655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105112-105677:-1:exon

position:105112:-1
position: 105112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99655-99905:-1:exon

CKS1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CKS1B
product: CDC28 protein kinase regulatory subunit 1B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_032093655.1
SIO_010081: CKS1B
subclass of: SO_0000673
so part of: CKS1B
location: complement(join(99655..100099,100451..100564))
location: region:99655-100564:-1
so has part: feature:100451-100564:-1:exon
so has part: feature:99655-100099:-1:exon

position:100564:-1
position: 100564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100451-100564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99655-100099:-1:exon

CKS1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CKS1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinases regulatory subunit 1 isoform X1
translation: MGLQRHPGEPLAQGGELRMLCPQPGGPQAPCHSNTRPATNPIVFIQGQIQLPLPCCWVQHGHPPPHSSLQPLCRCPLRENQKHEYLKPGDKADTECIQAHPSPAPSNVQEGTRSFCGSQHHATHVPAVSSCCWLAGLCRGEQRCRDDTAARSFLEYRDMQSFESTDLAWRAGGRKRRMARSRIQSPTSCSSDGHCPRSRKSEWPLVCRSSQSFHAEKAPSSSFSSAFLGGFTP
SIO_010081: CKS1B
subclass of: SO_0000673
so part of: CKS1B
location: complement(join(99756..99905,105112..105663))
location: region:99756-105663:-1
so has part: feature:105112-105663:-1:exon
so has part: feature:99756-99905:-1:exon

XP_031949545.1
type: Protein
SIO_000068: ncbiprotein

position:99756:-1
position: 99756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105663:-1
position: 105663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105112-105663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99756-99905:-1:exon

CKS1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CKS1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinases regulatory subunit 1 isoform X3
translation: MAHKQIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLLSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPLPKKPEK
SIO_010081: CKS1B
subclass of: SO_0000673
so part of: CKS1B
location: complement(join(99853..99905,99972..100099,100451..100509))
location: region:99853-100509:-1
so has part: feature:100451-100509:-1:exon
so has part: feature:99972-100099:-1:exon
so has part: feature:99853-99905:-1:exon

XP_031949547.1
type: Protein
SIO_000068: ncbiprotein

position:99853:-1
position: 99853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100509:-1
position: 100509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100451-100509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99972-100099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99853-99905:-1:exon

CKS1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CKS1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinases regulatory subunit 1 isoform X2
translation: MAHKQIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLLSESEWRNLGVQQSQGWVHYMIHEPGEPRGGAGGARGARPDPFFCPTEPHILLFRRPLPKKPEK
SIO_010081: CKS1B
subclass of: SO_0000673
so part of: CKS1B
location: complement(join(99853..100099,100451..100509))
location: region:99853-100509:-1
so has part: feature:100451-100509:-1:exon
so has part: feature:99853-100099:-1:exon

XP_031949546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100451-100509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99853-100099:-1:exon

SHC1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 100710..110850
location: region:100710-110850:1
so has part: feature:100710-110850:1:exon
subclass of: SO_0000010

116436487
type: Gene
SIO_000068: ncbigene

position:100710:1
position: 100710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110850:1
position: 110850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100710-110850:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SHC1
product: SHC adaptor protein 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_032093643.1
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(100710..100765,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110850)
location: region:100710-110850:1
so has part: feature:100710-100765:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100710-100765:1:exon

position:100765:1
position: 100765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106380-106541:1:exon

position:106380:1
position: 106380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106541:1
position: 106541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:106775-106845:1:exon

position:106775:1
position: 106775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106845:1
position: 106845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:107152-107215:1:exon

position:107152:1
position: 107152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107215:1
position: 107215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:107476-107595:1:exon

position:107476:1
position: 107476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107595:1
position: 107595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108027-108080:1:exon

position:108027:1
position: 108027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108080:1
position: 108080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108205-108256:1:exon

position:108205:1
position: 108205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108256:1
position: 108256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:108441-108567:1:exon

position:108441:1
position: 108441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108567:1
position: 108567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:108665-108833:1:exon

position:108665:1
position: 108665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108833:1
position: 108833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:109009-109069:1:exon

position:109009:1
position: 109009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109069:1
position: 109069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:109190-109351:1:exon

position:109190:1
position: 109190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109351:1
position: 109351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:109437-109699:1:exon

position:109437:1
position: 109437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109699:1
position: 109699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:109942-110850:1:exon

position:109942:1
position: 109942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SHC1
product: SHC adaptor protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_032093640.1
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(100748..100765,102789..102872,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110850)
location: region:100748-110850:1
so has part: feature:100748-100765:1:exon
so has part: feature:102789-102872:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110850:1:exon

position:100748:1
position: 100748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100748-100765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102789-102872:1:exon

position:102789:1
position: 102789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102872:1
position: 102872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:106380-106541:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109942-110850:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SHC1
product: SHC adaptor protein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_032093642.1
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(100790..100863,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110850)
location: region:100790-110850:1
so has part: feature:100790-100863:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110850:1:exon

position:100790:1
position: 100790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100790-100863:1:exon

position:100863:1
position: 100863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106380-106541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109942-110850:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SHC1
product: SHC adaptor protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_032093639.1
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(100808..100863,102789..102872,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110850)
location: region:100808-110850:1
so has part: feature:100808-100863:1:exon
so has part: feature:102789-102872:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110850:1:exon

position:100808:1
position: 100808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100808-100863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102789-102872:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106380-106541:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109942-110850:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SHC1
product: SHC adaptor protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_032093637.1
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(100940..102872,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110850)
location: region:100940-110850:1
so has part: feature:100940-102872:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110850:1:exon

position:100940:1
position: 100940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100940-102872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106380-106541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109942-110850:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SHC1
product: SHC adaptor protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_032093638.1
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(100940..102872,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109193..109351,109437..109699,109942..110850)
location: region:100940-110850:1
so has part: feature:100940-102872:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109193-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110850:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100940-102872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106380-106541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109193-109351:1:exon

position:109193:1
position: 109193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109942-110850:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X3
translation: MFLSQRITAPSSRQWEEGGFQVSLTPCVSSLLHGSHSPIHLWTAWRSRVCLLAPWPPPQRAGTGLANSLFVPEPQVGVPDERGCVSLLPARGLPCPPPAMEYVDMNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSSGGEYDAQKQHTPAQAGREKYAAPAGTPGRTDLFDDPSYVNVQNIDKTRQASAAGATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(102564..102872,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110070)
location: region:102564-110070:1
so has part: feature:102564-102872:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110070:1:exon

XP_031949528.1
type: Protein
SIO_000068: ncbiprotein

position:102564:1
position: 102564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110070:1
position: 110070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102564-102872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106380-106541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109942-110070:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X4
translation: MFLSQRITAPSSRQWEEGGFQVSLTPCVSSLLHGSHSPIHLWTAWRSRVCLLAPWPPPQRAGTGLANSLFVPEPQVGVPDERGCVSLLPARGLPCPPPAMEYVDMNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSSGGEYDAQKQHTPAQGREKYAAPAGTPGRTDLFDDPSYVNVQNIDKTRQASAAGATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(102564..102872,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109193..109351,109437..109699,109942..110070)
location: region:102564-110070:1
so has part: feature:102564-102872:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109193-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110070:1:exon

XP_031949529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102564-102872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106380-106541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109193-109351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109942-110070:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X5
translation: MEYVDMNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSSGGEYDAQKQHTPAQAGREKYAAPAGTPGRTDLFDDPSYVNVQNIDKTRQASAAGATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(102861..102872,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110070)
location: region:102861-110070:1
so has part: feature:102861-102872:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110070:1:exon

XP_031949530.1
type: Protein
SIO_000068: ncbiprotein

position:102861:1
position: 102861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102861-102872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106380-106541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109942-110070:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X5
translation: MEYVDMNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSSGGEYDAQKQHTPAQAGREKYAAPAGTPGRTDLFDDPSYVNVQNIDKTRQASAAGATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(102861..102872,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110070)
location: region:102861-110070:1
so has part: feature:102861-102872:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110070:1:exon

XP_031949531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102861-102872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106380-106541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109942-110070:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SHC1
product: SHC adaptor protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093635.1
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(104250..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110850)
location: region:104250-110850:1
so has part: feature:104250-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110850:1:exon

position:104250:1
position: 104250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104250-106541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109942-110850:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SHC1
product: SHC adaptor protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032093641.1
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(104846..105160,106380..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110850)
location: region:104846-110850:1
so has part: feature:104846-105160:1:exon
so has part: feature:106380-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110850:1:exon

position:104846:1
position: 104846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104846-105160:1:exon

position:105160:1
position: 105160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106380-106541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109942-110850:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SHC1
product: SHC adaptor protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093636.1
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(105938..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109193..109351,109437..109699,109942..110850)
location: region:105938-110850:1
so has part: feature:105938-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109193-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110850:1:exon

position:105938:1
position: 105938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105938-106541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109193-109351:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109942-110850:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X1
translation: MDLLQKSKYSHLRNESVSSLEEAIGGLGVPPSPVESLASMRSLPDSLSSSSLSHAAPLGELSPELEESPTTLCSFFPKMANLKLSNPANLLSLRGSSASSSSGEPGPPGMPALVPGVAASPGSARPVTVCSQDMNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSSGGEYDAQKQHTPAQAGREKYAAPAGTPGRTDLFDDPSYVNVQNIDKTRQASAAGATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(105984..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110070)
location: region:105984-110070:1
so has part: feature:105984-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110070:1:exon

XP_031949526.1
type: Protein
SIO_000068: ncbiprotein

position:105984:1
position: 105984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105984-106541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109942-110070:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X2
translation: MDLLQKSKYSHLRNESVSSLEEAIGGLGVPPSPVESLASMRSLPDSLSSSSLSHAAPLGELSPELEESPTTLCSFFPKMANLKLSNPANLLSLRGSSASSSSGEPGPPGMPALVPGVAASPGSARPVTVCSQDMNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSSGGEYDAQKQHTPAQGREKYAAPAGTPGRTDLFDDPSYVNVQNIDKTRQASAAGATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(105984..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109193..109351,109437..109699,109942..110070)
location: region:105984-110070:1
so has part: feature:105984-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109193-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110070:1:exon

XP_031949527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105984-106541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109193-109351:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109942-110070:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X6
translation: MNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSSGGEYDAQKQHTPAQAGREKYAAPAGTPGRTDLFDDPSYVNVQNIDKTRQASAAGATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(106383..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110070)
location: region:106383-110070:1
so has part: feature:106383-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110070:1:exon

XP_031949532.1
type: Protein
SIO_000068: ncbiprotein

position:106383:1
position: 106383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106383-106541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109942-110070:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X6
translation: MNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSSGGEYDAQKQHTPAQAGREKYAAPAGTPGRTDLFDDPSYVNVQNIDKTRQASAAGATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(106383..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110070)
location: region:106383-110070:1
so has part: feature:106383-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110070:1:exon

XP_031949533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106383-106541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109942-110070:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X6
translation: MNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSSGGEYDAQKQHTPAQAGREKYAAPAGTPGRTDLFDDPSYVNVQNIDKTRQASAAGATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(106383..106541,106775..106845,107152..107215,107476..107595,108027..108080,108205..108256,108441..108567,108665..108833,109009..109069,109190..109351,109437..109699,109942..110070)
location: region:106383-110070:1
so has part: feature:106383-106541:1:exon
so has part: feature:106775-106845:1:exon
so has part: feature:107152-107215:1:exon
so has part: feature:107476-107595:1:exon
so has part: feature:108027-108080:1:exon
so has part: feature:108205-108256:1:exon
so has part: feature:108441-108567:1:exon
so has part: feature:108665-108833:1:exon
so has part: feature:109009-109069:1:exon
so has part: feature:109190-109351:1:exon
so has part: feature:109437-109699:1:exon
so has part: feature:109942-110070:1:exon

XP_031949534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106383-106541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106775-106845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107152-107215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107476-107595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108027-108080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108205-108256:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108441-108567:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108665-108833:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109009-109069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109190-109351:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:109437-109699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:109942-110070:1:exon

PYGO2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PYGO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <110529..113077
location: region:110529-113077:1
so has part: feature:110529-113077:1:exon
subclass of: SO_0000010

116436496
type: Gene
SIO_000068: ncbigene

position:110529:1
position: 110529
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:113077:1
position: 113077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110529-113077:1:exon

PYGO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PYGO2
product: pygopus family PHD finger 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093658.1
SIO_010081: PYGO2
subclass of: SO_0000673
so part of: PYGO2
location: join(<110529..110868,110945..111349,111428..111477,111553..113077)
location: region:110529-113077:1
so has part: feature:110529-110868:1:exon
so has part: feature:110945-111349:1:exon
so has part: feature:111428-111477:1:exon
so has part: feature:111553-113077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110529-110868:1:exon

position:110868:1
position: 110868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110945-111349:1:exon

position:110945:1
position: 110945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111349:1
position: 111349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111428-111477:1:exon

position:111428:1
position: 111428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111477:1
position: 111477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:111553-113077:1:exon

position:111553:1
position: 111553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PYGO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PYGO2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:111160..111162,aa:OTHER)
product: LOW QUALITY PROTEIN: pygopus homolog 2
translation: CLDPAGPTLLCKGRGWGRSLPHAPSTLYPIRDTLVLQDTRHHVRFLPARPAGAWAILQPRGAGGRTPLHAQCNSPQAKAQPRPSQPQPRPRYTKGTGGCIKVGISLGPGWCETVLAVGSALCSPSSFSRALPRPASVVCPVCSLTHPSPPPSIALHLVWSGRGVGWESAVIDMSRALGPAPCAVXLTPRGFRFRSGHGGDARAVRAMAAPHAEKLEGPVPAPPPPPGPPHPAGSTAAGGPGRKQGKAGLQMKSPEKKRRKSNTQGPAYSHLSEFAPPPTPMVDHLVASNPFEDDFGAPKVGAAPAPFLGSPVPFGGFRVQGGMSPQVPPGYGGGPQPLRRQPPPFAPGQMGPAFSIPPQNPNYVQPGGLTFAGQPFSQPLGQNFSPPMGQLMQGPVAGFGPMMSPTMGQPPRGDMGPGPALNPPGGPAVAQRFSQPSNLFGQSPMQRPGQNMPPLPPTASPFPGADPSFPASSEEGGKNPPPSTFAQEQHSGSPATVNGAQPGFAPNSAGRSASTPETNSLPLPPPGKATSTSGHQPPPGLVYPCGACRNEVNDDQDAILCEASCQKWFHRECTGMTENAYGLLTTEASAVWACDFCLKTKEIQSVYIREGMGQLVTANDG
SIO_010081: PYGO2
subclass of: SO_0000673
so part of: PYGO2
location: join(<110529..110868,110945..111349,111428..111477,111553..112626)
location: region:110529-112626:1
so has part: feature:110529-110868:1:exon
so has part: feature:110945-111349:1:exon
so has part: feature:111428-111477:1:exon
so has part: feature:111553-112626:1:exon

XP_031949549.1
type: Protein
SIO_000068: ncbiprotein

position:112626:1
position: 112626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110529-110868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110945-111349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111428-111477:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111553-112626:1:exon

PBXIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PBXIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 113527..116983
location: region:113527-116983:1
so has part: feature:113527-116983:1:exon
subclass of: SO_0000010

116436495
type: Gene
SIO_000068: ncbigene

position:113527:1
position: 113527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116983:1
position: 116983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113527-116983:1:exon

PBXIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PBXIP1
product: PBX homeobox interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093657.1
SIO_010081: PBXIP1
subclass of: SO_0000673
so part of: PBXIP1
location: join(113527..113940,114142..114247,114332..114399,114492..114633,114726..114938,115022..115045,115128..115201,115286..115411,115499..116025,116224..116667,116748..116983)
location: region:113527-116983:1
so has part: feature:113527-113940:1:exon
so has part: feature:114142-114247:1:exon
so has part: feature:114332-114399:1:exon
so has part: feature:114492-114633:1:exon
so has part: feature:114726-114938:1:exon
so has part: feature:115022-115045:1:exon
so has part: feature:115128-115201:1:exon
so has part: feature:115286-115411:1:exon
so has part: feature:115499-116025:1:exon
so has part: feature:116224-116667:1:exon
so has part: feature:116748-116983:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113527-113940:1:exon

position:113940:1
position: 113940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:114142-114247:1:exon

position:114142:1
position: 114142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114247:1
position: 114247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114332-114399:1:exon

position:114332:1
position: 114332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114399:1
position: 114399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114492-114633:1:exon

position:114492:1
position: 114492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114633:1
position: 114633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:114726-114938:1:exon

position:114726:1
position: 114726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114938:1
position: 114938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:115022-115045:1:exon

position:115022:1
position: 115022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115045:1
position: 115045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:115128-115201:1:exon

position:115128:1
position: 115128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115201:1
position: 115201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:115286-115411:1:exon

position:115286:1
position: 115286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115411:1
position: 115411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:115499-116025:1:exon

position:115499:1
position: 115499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116025:1
position: 116025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:116224-116667:1:exon

position:116224:1
position: 116224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116667:1
position: 116667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:116748-116983:1:exon

position:116748:1
position: 116748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PBXIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PBXIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor-interacting protein 1
translation: MAEKLEPRDSESSWVLAGSEGLPIDTVGPEQDSTSHGSEDEEQEEEDEDTQDTVTATATNGTTTFPSWTLCPEGSRQGDPEEREDSRVSAVPALDGSAVPSMLEGNKQEPNAEAEPQPCPDTPQAGPTMEDVCCTSSDNDTEGLRWRQGHKPHPGPPTVTPSPHRGTSDAGEDGLNMSKYLLGALALVAVGLLIITGGIYDMAEGPVESVGSWDLAAGEQELLLSVDSNDSQQKAPLPDAGGSQSVQSMSQLLDKLAKENQEIRLMQAELQAHKEDLRTLLHRSEGEAAAAGAQQQSLAAENAQLRAALEREVTALREAQAELRRLQATGAPGSPREPAAEQPRATGTPVRGKAAARWHGSLDSLRQELADTLDRARGSGDFKGLLEELSILEQHLAQVLEAEGLGSFPSPWKKPFKVDKESRWHKQHGAGGYPHEQERREHGKPHEKDPRTPHEHKPGKAWGKLSHSHPQHGSHELPWLRRYRAPQGCFGVTDCAHKEGQEVLRAALEPVQKVQFLQLLESFMGQLGLGRHFKRLAPQLDGAFRADGVFAHDRLRFVDFVDDVEDLLEEVAWQEWGDKEAVDGFEEYMLQHYSGTSRNMWRQRAQRQHGMGG
SIO_010081: PBXIP1
subclass of: SO_0000673
so part of: PBXIP1
location: join(113881..113940,114142..114247,114332..114399,114492..114633,114726..114938,115022..115045,115128..115201,115286..115411,115499..116025,116224..116667,116748..116805)
location: region:113881-116805:1
so has part: feature:113881-113940:1:exon
so has part: feature:114142-114247:1:exon
so has part: feature:114332-114399:1:exon
so has part: feature:114492-114633:1:exon
so has part: feature:114726-114938:1:exon
so has part: feature:115022-115045:1:exon
so has part: feature:115128-115201:1:exon
so has part: feature:115286-115411:1:exon
so has part: feature:115499-116025:1:exon
so has part: feature:116224-116667:1:exon
so has part: feature:116748-116805:1:exon

XP_031949548.1
type: Protein
SIO_000068: ncbiprotein

position:113881:1
position: 113881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116805:1
position: 116805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113881-113940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114142-114247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114332-114399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114492-114633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114726-114938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115022-115045:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:115128-115201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:115286-115411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:115499-116025:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116224-116667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116748-116805:1:exon

PMVK
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PMVK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 117743..119330
location: region:117743-119330:1
so has part: feature:117743-119330:1:exon
subclass of: SO_0000010

116436525
type: Gene
SIO_000068: ncbigene

position:117743:1
position: 117743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119330:1
position: 119330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117743-119330:1:exon

PMVK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PMVK
product: phosphomevalonate kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 12 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093702.1
SIO_010081: PMVK
subclass of: SO_0000673
so part of: PMVK
location: join(117743..117853,117996..118059,118525..118677,118745..118874,119065..119330)
location: region:117743-119330:1
so has part: feature:117743-117853:1:exon
so has part: feature:117996-118059:1:exon
so has part: feature:118525-118677:1:exon
so has part: feature:118745-118874:1:exon
so has part: feature:119065-119330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117743-117853:1:exon

position:117853:1
position: 117853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117996-118059:1:exon

position:117996:1
position: 117996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118059:1
position: 118059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118525-118677:1:exon

position:118525:1
position: 118525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118677:1
position: 118677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118745-118874:1:exon

position:118745:1
position: 118745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118874:1
position: 118874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119065-119330:1:exon

position:119065:1
position: 119065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PMVK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PMVK
product: phosphomevalonate kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093703.1
SIO_010081: PMVK
subclass of: SO_0000673
so part of: PMVK
location: join(117743..117853,117996..118059,118546..118677,118745..118874,119065..119330)
location: region:117743-119330:1
so has part: feature:117743-117853:1:exon
so has part: feature:117996-118059:1:exon
so has part: feature:118546-118677:1:exon
so has part: feature:118745-118874:1:exon
so has part: feature:119065-119330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117743-117853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117996-118059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118546-118677:1:exon

position:118546:1
position: 118546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118745-118874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119065-119330:1:exon

PMVK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PMVK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphomevalonate kinase isoform X1
translation: MAAPRAVLLLSGKRKSGKDFVAEELRSRLGPDVCTVLRLSGPLKEQYAKEHGLDFQRLLDASAYKEMFRQDMIRWGEEKRHTDPGFFCRAAVEGALQPVWVVSDTRRLSDVEWFRDVYGDVVQTVRVVATEETRKRRNWVFVTGVDDAESECGLDQGVAFDWVITNDGDKVALGEQLEMLLQSLHRSL
SIO_010081: PMVK
subclass of: SO_0000673
so part of: PMVK
location: join(117771..117853,117996..118059,118525..118677,118745..118874,119065..119201)
location: region:117771-119201:1
so has part: feature:117771-117853:1:exon
so has part: feature:117996-118059:1:exon
so has part: feature:118525-118677:1:exon
so has part: feature:118745-118874:1:exon
so has part: feature:119065-119201:1:exon

XP_031949593.1
type: Protein
SIO_000068: ncbiprotein

position:117771:1
position: 117771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119201:1
position: 119201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117771-117853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117996-118059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118525-118677:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118745-118874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119065-119201:1:exon

PMVK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PMVK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphomevalonate kinase isoform X2
translation: MAAPRAVLLLSGKRKSGKDFVAEELRSRLGPDVCTVLRLSGPLKEQYAKRLLDASAYKEMFRQDMIRWGEEKRHTDPGFFCRAAVEGALQPVWVVSDTRRLSDVEWFRDVYGDVVQTVRVVATEETRKRRNWVFVTGVDDAESECGLDQGVAFDWVITNDGDKVALGEQLEMLLQSLHRSL
SIO_010081: PMVK
subclass of: SO_0000673
so part of: PMVK
location: join(117771..117853,117996..118059,118546..118677,118745..118874,119065..119201)
location: region:117771-119201:1
so has part: feature:117771-117853:1:exon
so has part: feature:117996-118059:1:exon
so has part: feature:118546-118677:1:exon
so has part: feature:118745-118874:1:exon
so has part: feature:119065-119201:1:exon

XP_031949594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117771-117853:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117996-118059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118546-118677:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118745-118874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119065-119201:1:exon

KCNN3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: KCNN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 120028..137149
location: region:120028-137149:1
so has part: feature:120028-137149:1:exon
subclass of: SO_0000010

116436484
type: Gene
SIO_000068: ncbigene

position:120028:1
position: 120028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137149:1
position: 137149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120028-137149:1:exon

KCNN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: KCNN3
product: potassium calcium-activated channel subfamily N member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_032093630.1
SIO_010081: KCNN3
subclass of: SO_0000673
so part of: KCNN3
location: join(120028..120900,123806..123901,127019..127437,131053..131194,132880..132990,134255..134382,134554..134623,135063..137149)
location: region:120028-137149:1
so has part: feature:120028-120900:1:exon
so has part: feature:123806-123901:1:exon
so has part: feature:127019-127437:1:exon
so has part: feature:131053-131194:1:exon
so has part: feature:132880-132990:1:exon
so has part: feature:134255-134382:1:exon
so has part: feature:134554-134623:1:exon
so has part: feature:135063-137149:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120028-120900:1:exon

position:120900:1
position: 120900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123806-123901:1:exon

position:123806:1
position: 123806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123901:1
position: 123901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:127019-127437:1:exon

position:127019:1
position: 127019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127437:1
position: 127437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:131053-131194:1:exon

position:131053:1
position: 131053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131194:1
position: 131194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132880-132990:1:exon

position:132880:1
position: 132880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132990:1
position: 132990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134255-134382:1:exon

position:134255:1
position: 134255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134382:1
position: 134382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:134554-134623:1:exon

position:134554:1
position: 134554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134623:1
position: 134623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:135063-137149:1:exon

position:135063:1
position: 135063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: KCNN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small conductance calcium-activated potassium channel protein 3
translation: METSGHLHDSGVGDLEEDGRCPCPLPGDERSPPPPSALPPLQHSLLHSSPGSLRAPPPPPAAPAALHPSSRHGSQLNLGDHPAGSGVASSKHRQPSPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSRLSASRRNLIEAEPEAQPLQLFGAGEPPEIVVSREDNHAPATHRPTRPPARPAPTTFAKGPKRKAQNIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGLYSKDSMFSLALKCLISLSTVILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQISGLESKLEQLSASFNSLPLLMADMLRQQQQRLLAAVLEARGVSVPVGTPQTPLSESPIGVSSTSFPTPYTSSSSC
SIO_010081: KCNN3
subclass of: SO_0000673
so part of: KCNN3
location: join(120184..120900,123806..123901,127019..127437,131053..131194,132880..132990,134255..134382,134554..134623,135063..135359)
location: region:120184-135359:1
so has part: feature:120184-120900:1:exon
so has part: feature:123806-123901:1:exon
so has part: feature:127019-127437:1:exon
so has part: feature:131053-131194:1:exon
so has part: feature:132880-132990:1:exon
so has part: feature:134255-134382:1:exon
so has part: feature:134554-134623:1:exon
so has part: feature:135063-135359:1:exon

XP_031949521.1
type: Protein
SIO_000068: ncbiprotein

position:120184:1
position: 120184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135359:1
position: 135359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120184-120900:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123806-123901:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127019-127437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131053-131194:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132880-132990:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134255-134382:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134554-134623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135063-135359:1:exon

LOC116436485
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436485
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(121084..122574)
location: region:121084-122574:-1
so has part: feature:121084-122574:-1:exon
subclass of: SO_0000011

116436485
type: Gene
SIO_000068: ncbigene

position:121084:-1
position: 121084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122574:-1
position: 122574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121084-122574:-1:exon

LOC116436485
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436485
product: uncharacterized LOC116436485
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004237024.1
SIO_010081: LOC116436485
subclass of: SO_0000673
so part of: LOC116436485
location: complement(join(121084..121899,122005..122140,122359..122574))
location: region:121084-122574:-1
so has part: feature:122359-122574:-1:exon
so has part: feature:122005-122140:-1:exon
so has part: feature:121084-121899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122359-122574:-1:exon

position:122359:-1
position: 122359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:122005-122140:-1:exon

position:122005:-1
position: 122005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122140:-1
position: 122140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121084-121899:-1:exon

position:121899:-1
position: 121899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436405
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(142349..149232)
location: region:142349-149232:-1
so has part: feature:142349-149232:-1:exon
subclass of: SO_0000011

116436405
type: Gene
SIO_000068: ncbigene

position:142349:-1
position: 142349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149232:-1
position: 149232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142349-149232:-1:exon

LOC116436405
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436405
product: uncharacterized LOC116436405
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004237004.1
SIO_010081: LOC116436405
subclass of: SO_0000673
so part of: LOC116436405
location: complement(join(142349..147468,147650..149232))
location: region:142349-149232:-1
so has part: feature:147650-149232:-1:exon
so has part: feature:142349-147468:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147650-149232:-1:exon

position:147650:-1
position: 147650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142349-147468:-1:exon

position:147468:-1
position: 147468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAR
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ADAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 150444..163434
location: region:150444-163434:1
so has part: feature:150444-163434:1:exon
subclass of: SO_0000010

116436401
type: Gene
SIO_000068: ncbigene

position:150444:1
position: 150444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163434:1
position: 163434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150444-163434:1:exon

ADAR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ADAR
product: adenosine deaminase RNA specific, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_032093504.1
SIO_010081: ADAR
subclass of: SO_0000673
so part of: ADAR
location: join(150444..150533,152671..154201,155500..155686,155769..155926,156343..156484,156663..156868,157080..157236,158233..158404,158994..159087,160388..160516,160623..160756,161213..161395,161832..161944,162391..162518,162815..163434)
location: region:150444-163434:1
so has part: feature:150444-150533:1:exon
so has part: feature:152671-154201:1:exon
so has part: feature:155500-155686:1:exon
so has part: feature:155769-155926:1:exon
so has part: feature:156343-156484:1:exon
so has part: feature:156663-156868:1:exon
so has part: feature:157080-157236:1:exon
so has part: feature:158233-158404:1:exon
so has part: feature:158994-159087:1:exon
so has part: feature:160388-160516:1:exon
so has part: feature:160623-160756:1:exon
so has part: feature:161213-161395:1:exon
so has part: feature:161832-161944:1:exon
so has part: feature:162391-162518:1:exon
so has part: feature:162815-163434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150444-150533:1:exon

position:150533:1
position: 150533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152671-154201:1:exon

position:152671:1
position: 152671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154201:1
position: 154201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155500-155686:1:exon

position:155500:1
position: 155500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155686:1
position: 155686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155769-155926:1:exon

position:155769:1
position: 155769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155926:1
position: 155926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:156343-156484:1:exon

position:156343:1
position: 156343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156484:1
position: 156484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:156663-156868:1:exon

position:156663:1
position: 156663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156868:1
position: 156868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:157080-157236:1:exon

position:157080:1
position: 157080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157236:1
position: 157236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158233-158404:1:exon

position:158233:1
position: 158233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158404:1
position: 158404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:158994-159087:1:exon

position:158994:1
position: 158994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159087:1
position: 159087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:160388-160516:1:exon

position:160388:1
position: 160388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160516:1
position: 160516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:160623-160756:1:exon

position:160623:1
position: 160623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160756:1
position: 160756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:161213-161395:1:exon

position:161213:1
position: 161213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161395:1
position: 161395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:161832-161944:1:exon

position:161832:1
position: 161832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161944:1
position: 161944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:162391-162518:1:exon

position:162391:1
position: 162391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162518:1
position: 162518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:162815-163434:1:exon

position:162815:1
position: 162815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ADAR
product: adenosine deaminase RNA specific, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 133 samples with support for all annotated introns
transcript id: XM_032093503.1
SIO_010081: ADAR
subclass of: SO_0000673
so part of: ADAR
location: join(150674..151479,152671..154201,155500..155686,155769..155926,156343..156484,156663..156868,157080..157236,158233..158404,158994..159087,160388..160516,160623..160756,161213..161395,161832..161944,162391..162518,162815..163434)
location: region:150674-163434:1
so has part: feature:150674-151479:1:exon
so has part: feature:152671-154201:1:exon
so has part: feature:155500-155686:1:exon
so has part: feature:155769-155926:1:exon
so has part: feature:156343-156484:1:exon
so has part: feature:156663-156868:1:exon
so has part: feature:157080-157236:1:exon
so has part: feature:158233-158404:1:exon
so has part: feature:158994-159087:1:exon
so has part: feature:160388-160516:1:exon
so has part: feature:160623-160756:1:exon
so has part: feature:161213-161395:1:exon
so has part: feature:161832-161944:1:exon
so has part: feature:162391-162518:1:exon
so has part: feature:162815-163434:1:exon

position:150674:1
position: 150674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150674-151479:1:exon

position:151479:1
position: 151479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152671-154201:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155500-155686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155769-155926:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156343-156484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156663-156868:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157080-157236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158233-158404:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158994-159087:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160388-160516:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:160623-160756:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:161213-161395:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:161832-161944:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:162391-162518:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:162815-163434:1:exon

ADAR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ADAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-specific adenosine deaminase
translation: MIRGAGRGRGSYLTQSRHNCPSTNRGFFNHPRTSQETNQETFLHQQFLTEQDAEVSVLQGRGSHKESRTRGRRAAAPAPADRCQPSFSRAGGSRFSSQHPWVETSPRYCPPQYHRQENSRRDSDAVRLNFQRLSLAGQDYEQEILTVFRQLGEGRTCTANDLARKLKTHKKEVNRVLYKLLREGKLHKGEETPPLWRVASLSSGRERSPADCSASCTDLACESRGGERSTLGSGDPDMAETKEKICNYLFSVVETTALNLAKNIGFSRAKDVNAFLSALEKLGDVHKQNATPPRWSLTDRKRKRMQMRLKASSVMQMADPKPPESGLPSSFVPPCPQEMTAASPAVMASEEESVVNGQQLLGQACQGNVNDTEADASEDTKLEFSSLSNYDNSENSKWTTDDIPDNLNAINKQPDKSESIMNSQASPSYAAQFETFPCTPVEKLIACREKNPVSGLTEYSQYTYQHCDFIMLEQNGPSHEPRFKFQAVINGRRFPPAEAGSKKLAKQEAAANAMKVLMSEAENGRHGGIKCEEQFPSDSSEPELPLQLEPELPSAAAHLSLLPGKHPISILMEYGQKSGNIIEFQLLSQEGPPHDPRFSYCVKMGDQIFPAVVGNSKKGAKQMAAEVAVKILSGESVPHVSPEQPAVKPHSDQSMHNIGTPDESKVVKTKGVGELIKYLNVNPVSGLLEYARSNGFAAEFKLIDQSGPPHDPKFVYQAKVGGRWFPAVTAHNKKQGKQEAADAALRVLIGESEKTEHMEGVNTTELPVSGSTLHDQMAMLSHQRFNSLTARIQHSLLGRKILAAVIMRRGNTGLGVVVSIGTGNRCVKGEELSLKGETVNDCHAEIISRRGFVRFLYSELMKYDPSNPSSAEESIFEQAGGKKLKIKSSVTFHLYISTAPCGDGALFDKSCSDQANEMGQPQHQPLFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTMSCSDKILRWNILGLQGALLSHFLEPVYLRSVTLGYLYSQGHLTRAICCRMERDGNTLKEKLQAPYHINHPEVGRVSVYDSARQTGKTKESSVNWCLADESEVEVLDGTKGKVDGVKLEVSRVSKRKMFTLFQQLCAKNNRKDLLSFSVYSDAKEAATAYQAAKQCFFSTLEELGYGSWIRKPQEEDSFSVPDA
SIO_010081: ADAR
subclass of: SO_0000673
so part of: ADAR
location: join(152757..154201,155500..155686,155769..155926,156343..156484,156663..156868,157080..157236,158233..158404,158994..159087,160388..160516,160623..160756,161213..161395,161832..161944,162391..162518,162815..163055)
location: region:152757-163055:1
so has part: feature:152757-154201:1:exon
so has part: feature:155500-155686:1:exon
so has part: feature:155769-155926:1:exon
so has part: feature:156343-156484:1:exon
so has part: feature:156663-156868:1:exon
so has part: feature:157080-157236:1:exon
so has part: feature:158233-158404:1:exon
so has part: feature:158994-159087:1:exon
so has part: feature:160388-160516:1:exon
so has part: feature:160623-160756:1:exon
so has part: feature:161213-161395:1:exon
so has part: feature:161832-161944:1:exon
so has part: feature:162391-162518:1:exon
so has part: feature:162815-163055:1:exon

XP_031949394.1
type: Protein
SIO_000068: ncbiprotein

position:152757:1
position: 152757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163055:1
position: 163055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152757-154201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155500-155686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155769-155926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156343-156484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156663-156868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157080-157236:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158233-158404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158994-159087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160388-160516:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160623-160756:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:161213-161395:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:161832-161944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:162391-162518:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:162815-163055:1:exon

ADAR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ADAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-specific adenosine deaminase
translation: MIRGAGRGRGSYLTQSRHNCPSTNRGFFNHPRTSQETNQETFLHQQFLTEQDAEVSVLQGRGSHKESRTRGRRAAAPAPADRCQPSFSRAGGSRFSSQHPWVETSPRYCPPQYHRQENSRRDSDAVRLNFQRLSLAGQDYEQEILTVFRQLGEGRTCTANDLARKLKTHKKEVNRVLYKLLREGKLHKGEETPPLWRVASLSSGRERSPADCSASCTDLACESRGGERSTLGSGDPDMAETKEKICNYLFSVVETTALNLAKNIGFSRAKDVNAFLSALEKLGDVHKQNATPPRWSLTDRKRKRMQMRLKASSVMQMADPKPPESGLPSSFVPPCPQEMTAASPAVMASEEESVVNGQQLLGQACQGNVNDTEADASEDTKLEFSSLSNYDNSENSKWTTDDIPDNLNAINKQPDKSESIMNSQASPSYAAQFETFPCTPVEKLIACREKNPVSGLTEYSQYTYQHCDFIMLEQNGPSHEPRFKFQAVINGRRFPPAEAGSKKLAKQEAAANAMKVLMSEAENGRHGGIKCEEQFPSDSSEPELPLQLEPELPSAAAHLSLLPGKHPISILMEYGQKSGNIIEFQLLSQEGPPHDPRFSYCVKMGDQIFPAVVGNSKKGAKQMAAEVAVKILSGESVPHVSPEQPAVKPHSDQSMHNIGTPDESKVVKTKGVGELIKYLNVNPVSGLLEYARSNGFAAEFKLIDQSGPPHDPKFVYQAKVGGRWFPAVTAHNKKQGKQEAADAALRVLIGESEKTEHMEGVNTTELPVSGSTLHDQMAMLSHQRFNSLTARIQHSLLGRKILAAVIMRRGNTGLGVVVSIGTGNRCVKGEELSLKGETVNDCHAEIISRRGFVRFLYSELMKYDPSNPSSAEESIFEQAGGKKLKIKSSVTFHLYISTAPCGDGALFDKSCSDQANEMGQPQHQPLFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTMSCSDKILRWNILGLQGALLSHFLEPVYLRSVTLGYLYSQGHLTRAICCRMERDGNTLKEKLQAPYHINHPEVGRVSVYDSARQTGKTKESSVNWCLADESEVEVLDGTKGKVDGVKLEVSRVSKRKMFTLFQQLCAKNNRKDLLSFSVYSDAKEAATAYQAAKQCFFSTLEELGYGSWIRKPQEEDSFSVPDA
SIO_010081: ADAR
subclass of: SO_0000673
so part of: ADAR
location: join(152757..154201,155500..155686,155769..155926,156343..156484,156663..156868,157080..157236,158233..158404,158994..159087,160388..160516,160623..160756,161213..161395,161832..161944,162391..162518,162815..163055)
location: region:152757-163055:1
so has part: feature:152757-154201:1:exon
so has part: feature:155500-155686:1:exon
so has part: feature:155769-155926:1:exon
so has part: feature:156343-156484:1:exon
so has part: feature:156663-156868:1:exon
so has part: feature:157080-157236:1:exon
so has part: feature:158233-158404:1:exon
so has part: feature:158994-159087:1:exon
so has part: feature:160388-160516:1:exon
so has part: feature:160623-160756:1:exon
so has part: feature:161213-161395:1:exon
so has part: feature:161832-161944:1:exon
so has part: feature:162391-162518:1:exon
so has part: feature:162815-163055:1:exon

XP_031949395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152757-154201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155500-155686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155769-155926:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156343-156484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156663-156868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157080-157236:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158233-158404:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158994-159087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160388-160516:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:160623-160756:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:161213-161395:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:161832-161944:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:162391-162518:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:162815-163055:1:exon

CHRNB2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: CHRNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(165447..168747)
location: region:165447-168747:-1
so has part: feature:165447-168747:-1:exon
subclass of: SO_0000010

116436402
type: Gene
SIO_000068: ncbigene

position:165447:-1
position: 165447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168747:-1
position: 168747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165447-168747:-1:exon

CHRNB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CHRNB2
product: cholinergic receptor nicotinic beta 2 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 ESTs, 80 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
transcript id: XM_032093505.1
SIO_010081: CHRNB2
subclass of: SO_0000673
so part of: CHRNB2
location: complement(join(165447..165701,166255..167215,167335..167444,167766..167810,167909..168054,168578..168747))
location: region:165447-168747:-1
so has part: feature:168578-168747:-1:exon
so has part: feature:167909-168054:-1:exon
so has part: feature:167766-167810:-1:exon
so has part: feature:167335-167444:-1:exon
so has part: feature:166255-167215:-1:exon
so has part: feature:165447-165701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168578-168747:-1:exon

position:168578:-1
position: 168578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167909-168054:-1:exon

position:167909:-1
position: 167909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168054:-1
position: 168054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167766-167810:-1:exon

position:167766:-1
position: 167766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167810:-1
position: 167810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167335-167444:-1:exon

position:167335:-1
position: 167335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167444:-1
position: 167444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:166255-167215:-1:exon

position:166255:-1
position: 166255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167215:-1
position: 167215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:165447-165701:-1:exon

position:165701:-1
position: 165701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CHRNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit beta-2
translation: MALLRVLCLLAALRRSLGTDTEERLVEYLLDPARYNKLIRPATNGSELVTVQLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLTWKPEDFDNMKKVRLPSKHIWLPDVVLYNNADGMYEVSFYSNAVISYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWDIVALPGRRNENPDDSTYVDITYDFIIRRKPLFYTINLIIPCILITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMPPWVRTLFLHKLPALLFMKQPRQNCARQRLRQRRHTQERAAAAALFVQAGARTCTCYANPGAAKAEGLNGYRERQGQAPAPAAGCSCGLEEAVDGVRFIADHMRSEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTVGMFLQPLFQNYTTNSLLQLGQGTPTSK
SIO_010081: CHRNB2
subclass of: SO_0000673
so part of: CHRNB2
location: complement(join(165531..165701,166255..167215,167335..167444,167766..167810,167909..168054,168578..168620))
location: region:165531-168620:-1
so has part: feature:168578-168620:-1:exon
so has part: feature:167909-168054:-1:exon
so has part: feature:167766-167810:-1:exon
so has part: feature:167335-167444:-1:exon
so has part: feature:166255-167215:-1:exon
so has part: feature:165531-165701:-1:exon

XP_031949396.1
type: Protein
SIO_000068: ncbiprotein

position:165531:-1
position: 165531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168620:-1
position: 168620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168578-168620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167909-168054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167766-167810:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167335-167444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166255-167215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165531-165701:-1:exon

UBE2Q1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: UBE2Q1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 169251..177930
location: region:169251-177930:1
so has part: feature:169251-177930:1:exon
subclass of: SO_0000010

116436404
type: Gene
SIO_000068: ncbigene

position:169251:1
position: 169251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177930:1
position: 177930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169251-177930:1:exon

UBE2Q1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: UBE2Q1
product: ubiquitin conjugating enzyme E2 Q1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 50 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_032093506.1
SIO_010081: UBE2Q1
subclass of: SO_0000673
so part of: UBE2Q1
location: join(169251..169620,170695..170799,171100..171204,171520..171570,173429..173569,174137..174221,174653..174713,175243..175333,175426..175484,175731..175779,175950..176045,176191..176257,176697..177930)
location: region:169251-177930:1
so has part: feature:169251-169620:1:exon
so has part: feature:170695-170799:1:exon
so has part: feature:171100-171204:1:exon
so has part: feature:171520-171570:1:exon
so has part: feature:173429-173569:1:exon
so has part: feature:174137-174221:1:exon
so has part: feature:174653-174713:1:exon
so has part: feature:175243-175333:1:exon
so has part: feature:175426-175484:1:exon
so has part: feature:175731-175779:1:exon
so has part: feature:175950-176045:1:exon
so has part: feature:176191-176257:1:exon
so has part: feature:176697-177930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169251-169620:1:exon

position:169620:1
position: 169620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170695-170799:1:exon

position:170695:1
position: 170695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170799:1
position: 170799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171100-171204:1:exon

position:171100:1
position: 171100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171204:1
position: 171204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171520-171570:1:exon

position:171520:1
position: 171520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171570:1
position: 171570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173429-173569:1:exon

position:173429:1
position: 173429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173569:1
position: 173569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:174137-174221:1:exon

position:174137:1
position: 174137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174221:1
position: 174221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:174653-174713:1:exon

position:174653:1
position: 174653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174713:1
position: 174713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:175243-175333:1:exon

position:175243:1
position: 175243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175333:1
position: 175333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:175426-175484:1:exon

position:175426:1
position: 175426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175484:1
position: 175484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:175731-175779:1:exon

position:175731:1
position: 175731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175779:1
position: 175779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:175950-176045:1:exon

position:175950:1
position: 175950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176045:1
position: 176045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:176191-176257:1:exon

position:176191:1
position: 176191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176257:1
position: 176257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:176697-177930:1:exon

position:176697:1
position: 176697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2Q1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: UBE2Q1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Q1
translation: MQRAGPEEAARAQAVAGGPGRSGAEVAAAPAGRLLRRELRLLESIFHRGHERFRIGSACPDEISCEFVPGAGARAGASASRGPPPGPVRIHCNITESYPAVPPIWSVESDDPNLAAILERLVEVRKGNTLLLQHLKRIISDLCKLYNLPQHPDVEMLDQPLPAEQSTQEEVSSEEEDEEMPEDTEDLDHYEMKEEEPADGRKTEDEGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMKELRDIYRSPSFKGGYYAVELVNDSLYDWNVKLLKVDEDSALHNDLQILKEKEGTDFILLNFSFKDNFPFDPPFVRVVSPVLSGGYVLGGGAICMELLTKQGWSSAYSIESVIMQISATLVKGKARVQFGANKNQYSLTRAQQSYKSLVQIHEKNGWYTPPKEDG
SIO_010081: UBE2Q1
subclass of: SO_0000673
so part of: UBE2Q1
location: join(169336..169620,170695..170799,171100..171204,171520..171570,173429..173569,174137..174221,174653..174713,175243..175333,175426..175484,175731..175779,175950..176045,176191..176257,176697..176728)
location: region:169336-176728:1
so has part: feature:169336-169620:1:exon
so has part: feature:170695-170799:1:exon
so has part: feature:171100-171204:1:exon
so has part: feature:171520-171570:1:exon
so has part: feature:173429-173569:1:exon
so has part: feature:174137-174221:1:exon
so has part: feature:174653-174713:1:exon
so has part: feature:175243-175333:1:exon
so has part: feature:175426-175484:1:exon
so has part: feature:175731-175779:1:exon
so has part: feature:175950-176045:1:exon
so has part: feature:176191-176257:1:exon
so has part: feature:176697-176728:1:exon

XP_031949397.1
type: Protein
SIO_000068: ncbiprotein

position:169336:1
position: 169336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176728:1
position: 176728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169336-169620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170695-170799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171100-171204:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171520-171570:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173429-173569:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174137-174221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:174653-174713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:175243-175333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175426-175484:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:175731-175779:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:175950-176045:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:176191-176257:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:176697-176728:1:exon

SHE
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179781..184369
location: region:179781-184369:1
so has part: feature:179781-184369:1:exon
subclass of: SO_0000010

116436409
type: Gene
SIO_000068: ncbigene

position:179781:1
position: 179781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184369:1
position: 184369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179781-184369:1:exon

SHE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SHE
product: Src homology 2 domain containing E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 127 samples with support for all annotated introns
transcript id: XM_032093518.1
SIO_010081: SHE
subclass of: SO_0000673
so part of: SHE
location: join(179781..180792,181417..181543,182349..182657,183101..183251,183356..183475,183871..184369)
location: region:179781-184369:1
so has part: feature:179781-180792:1:exon
so has part: feature:181417-181543:1:exon
so has part: feature:182349-182657:1:exon
so has part: feature:183101-183251:1:exon
so has part: feature:183356-183475:1:exon
so has part: feature:183871-184369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179781-180792:1:exon

position:180792:1
position: 180792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181417-181543:1:exon

position:181417:1
position: 181417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181543:1
position: 181543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182349-182657:1:exon

position:182349:1
position: 182349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182657:1
position: 182657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183101-183251:1:exon

position:183101:1
position: 183101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183251:1
position: 183251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:183356-183475:1:exon

position:183356:1
position: 183356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183475:1
position: 183475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:183871-184369:1:exon

position:183871:1
position: 183871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein E
translation: MAAKWFKEFPSNLKTVSERARPGSGSLGKSRKNSTAELGGYRAAGGGKEGGSRLSRDNLQGLLQVATGKMRKNSRVEGGTAEGPPKTYINRLIKVEAPEKNGKGHPGPLPACLPAPEQDKGKPPKTETVIILEDYADPYDAKRTKGQRDAERLGENDGYMEPYDAQQMITEIRRRGSKDPLVKAILLLDGPGEPGEGGAKSDLAKRLGAKEVAGKGPQLYDTPYEPGEGVAGGTPERRVRAGDGRLPENDERPAGEYEQPWEWKKEQIVKALSVQFEGSERPKEETLRQHLRQKSWTPKMLKPAGTEHSEGERVDPALALEKQPWYHGAITRAEAESRLQTCREAGYLVRTSETGSGKYSIALKTSQGCVHIIVAQTKDNKYTLSQASGVFASIPEVVHYYSTEKLPFKGAEHMALLHPVHCKLH
SIO_010081: SHE
subclass of: SO_0000673
so part of: SHE
location: join(180409..180792,181417..181543,182349..182657,183101..183251,183356..183475,183871..184057)
location: region:180409-184057:1
so has part: feature:180409-180792:1:exon
so has part: feature:181417-181543:1:exon
so has part: feature:182349-182657:1:exon
so has part: feature:183101-183251:1:exon
so has part: feature:183356-183475:1:exon
so has part: feature:183871-184057:1:exon

XP_031949409.1
type: Protein
SIO_000068: ncbiprotein

position:180409:1
position: 180409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184057:1
position: 184057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180409-180792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181417-181543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182349-182657:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183101-183251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183356-183475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183871-184057:1:exon

IL6R
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: IL6R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(184877..188434)
location: region:184877-188434:-1
so has part: feature:184877-188434:-1:exon
subclass of: SO_0000010

116436408
type: Gene
SIO_000068: ncbigene

position:184877:-1
position: 184877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188434:-1
position: 188434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184877-188434:-1:exon

IL6R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IL6R
product: interleukin 6 receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XM_032093514.1
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(184877..185526,185610..185718,185809..185887,186015..186058,186143..186523,186605..186789,187143..187266,187347..187592,188291..188434))
location: region:184877-188434:-1
so has part: feature:188291-188434:-1:exon
so has part: feature:187347-187592:-1:exon
so has part: feature:187143-187266:-1:exon
so has part: feature:186605-186789:-1:exon
so has part: feature:186143-186523:-1:exon
so has part: feature:186015-186058:-1:exon
so has part: feature:185809-185887:-1:exon
so has part: feature:185610-185718:-1:exon
so has part: feature:184877-185526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188291-188434:-1:exon

position:188291:-1
position: 188291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:187347-187592:-1:exon

position:187347:-1
position: 187347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187592:-1
position: 187592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:187143-187266:-1:exon

position:187143:-1
position: 187143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187266:-1
position: 187266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186605-186789:-1:exon

position:186605:-1
position: 186605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186789:-1
position: 186789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:186143-186523:-1:exon

position:186143:-1
position: 186143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186523:-1
position: 186523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:186015-186058:-1:exon

position:186015:-1
position: 186015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186058:-1
position: 186058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:185809-185887:-1:exon

position:185809:-1
position: 185809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185887:-1
position: 185887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:185610-185718:-1:exon

position:185610:-1
position: 185610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185718:-1
position: 185718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:184877-185526:-1:exon

position:185526:-1
position: 185526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL6R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IL6R
product: interleukin 6 receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_032093515.1
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(184877..185526,185610..185718,185809..185887,186015..186058,186143..186287,186363..186526,186605..186789,187143..187284,187347..187592,188291..188434))
location: region:184877-188434:-1
so has part: feature:188291-188434:-1:exon
so has part: feature:187347-187592:-1:exon
so has part: feature:187143-187284:-1:exon
so has part: feature:186605-186789:-1:exon
so has part: feature:186363-186526:-1:exon
so has part: feature:186143-186287:-1:exon
so has part: feature:186015-186058:-1:exon
so has part: feature:185809-185887:-1:exon
so has part: feature:185610-185718:-1:exon
so has part: feature:184877-185526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188291-188434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187347-187592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187143-187284:-1:exon

position:187284:-1
position: 187284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186605-186789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186363-186526:-1:exon

position:186363:-1
position: 186363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186526:-1
position: 186526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:186143-186287:-1:exon

position:186287:-1
position: 186287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:186015-186058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185809-185887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185610-185718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184877-185526:-1:exon

IL6R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IL6R
product: interleukin 6 receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_032093516.1
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(184877..185526,185610..185718,185809..185887,186015..186058,186143..186287,186363..186523,186605..186789,187143..187284,187347..187592,188291..188433))
location: region:184877-188433:-1
so has part: feature:188291-188433:-1:exon
so has part: feature:187347-187592:-1:exon
so has part: feature:187143-187284:-1:exon
so has part: feature:186605-186789:-1:exon
so has part: feature:186363-186523:-1:exon
so has part: feature:186143-186287:-1:exon
so has part: feature:186015-186058:-1:exon
so has part: feature:185809-185887:-1:exon
so has part: feature:185610-185718:-1:exon
so has part: feature:184877-185526:-1:exon

position:188433:-1
position: 188433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188291-188433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187347-187592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187143-187284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186605-186789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186363-186523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186143-186287:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186015-186058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185809-185887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185610-185718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184877-185526:-1:exon

IL6R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IL6R
product: interleukin 6 receptor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XM_032093517.1
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(184877..185526,185610..185718,185809..185887,186015..186058,186143..186287,186363..186523,186605..186789,187143..187266,187347..187592,188291..188432))
location: region:184877-188432:-1
so has part: feature:188291-188432:-1:exon
so has part: feature:187347-187592:-1:exon
so has part: feature:187143-187266:-1:exon
so has part: feature:186605-186789:-1:exon
so has part: feature:186363-186523:-1:exon
so has part: feature:186143-186287:-1:exon
so has part: feature:186015-186058:-1:exon
so has part: feature:185809-185887:-1:exon
so has part: feature:185610-185718:-1:exon
so has part: feature:184877-185526:-1:exon

position:188432:-1
position: 188432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188291-188432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187347-187592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187143-187266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186605-186789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186363-186523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186143-186287:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186015-186058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185809-185887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185610-185718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184877-185526:-1:exon

IL6R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IL6R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-6 receptor subunit alpha isoform X4
translation: MARPPPPLLLGLLLLRLLLQLAAAGRPCGPTGLSRDTVLGRLGANITLTCQDKVPANATVLWQVEEQGSAGGWARRLAEGSMLLLRRLRYEDSGRYSCSVGSHLLRSLRLLVAEPPETPQVSCYRRSHDKDILCEWPQQERPSPGTRAMLWVKRRFVAENGTEQRCRYFSKARKFSCRVKVPPGTDDTKHLVVSTCVSNSAGGSAGKDKIITLSGVLKPDPPINVTVEALEKAPQRLRVNWSYPSSWDPRFYWLRFQVRYRPEPAPAFMEVDQVTTTWLDIHDAWHGTRHVVQVRAKDEFGHGAWSEWSQEAVGTPWTDPRDLTSEMEPFSSQLPMEDGTYGVTLPPELFGEDHANSAGGSVMEPSTHPVASPYAFLVTGGSLLLGIALFVGIVVRYRQMWWTNEQERTKPEGEGQHMLVPLGLPLPTLNDTPLLSHSSPSAPGMLHITHSDYSSSGQ
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(185337..185526,185610..185718,185809..185887,186015..186058,186143..186287,186363..186523,186605..186789,187143..187266,187347..187592,188291..188384))
location: region:185337-188384:-1
so has part: feature:188291-188384:-1:exon
so has part: feature:187347-187592:-1:exon
so has part: feature:187143-187266:-1:exon
so has part: feature:186605-186789:-1:exon
so has part: feature:186363-186523:-1:exon
so has part: feature:186143-186287:-1:exon
so has part: feature:186015-186058:-1:exon
so has part: feature:185809-185887:-1:exon
so has part: feature:185610-185718:-1:exon
so has part: feature:185337-185526:-1:exon

XP_031949408.1
type: Protein
SIO_000068: ncbiprotein

position:185337:-1
position: 185337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188384:-1
position: 188384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188291-188384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187347-187592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187143-187266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186605-186789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186363-186523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186143-186287:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186015-186058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185809-185887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185610-185718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:185337-185526:-1:exon

IL6R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IL6R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-6 receptor subunit alpha isoform X1
translation: MARPPPPLLLGLLLLRLLLQLAAAGRPCGPTGLSRDTVLGRLGANITLTCQDKVPANATVLWQVEEQGSAGGWARRLAEGSMLLLRRLRYEDSGRYSCSVGSHLLRSLRLLVAEPPETPQVSCYRRSHDKDILCEWPQQERPSPGTRAMLWVKRRFVAENGTEQRCRYFSKARKFSCRVKVPPGTDDTKHLVVSTCVSNSAGGSAGKDKIITLSGVLKPDPPINVTVEALEKAPQRLRVNWSYPSSWDPRFYWLRFQVRYRPEPAPAFMEVRPCLLAWSCCLCLARLSPALCPLQVDQVTTTWLDIHDAWHGTRHVVQVRAKDEFGHGAWSEWSQEAVGTPWTDPRDLTSEMEPFSSQLPMEDGTYGVTLPPELFGEDHANSAGGSVMEPSTHPVASPYAFLVTGGSLLLGIALFVGIVVRYRQMWWTNEQERTKPEGEGQHMLVPLGLPLPTLNDTPLLSHSSPSAPGMLHITHSDYSSSGQ
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(185337..185526,185610..185718,185809..185887,186015..186058,186143..186523,186605..186789,187143..187266,187347..187592,188291..188384))
location: region:185337-188384:-1
so has part: feature:188291-188384:-1:exon
so has part: feature:187347-187592:-1:exon
so has part: feature:187143-187266:-1:exon
so has part: feature:186605-186789:-1:exon
so has part: feature:186143-186523:-1:exon
so has part: feature:186015-186058:-1:exon
so has part: feature:185809-185887:-1:exon
so has part: feature:185610-185718:-1:exon
so has part: feature:185337-185526:-1:exon

XP_031949405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188291-188384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187347-187592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187143-187266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186605-186789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186143-186523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186015-186058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:185809-185887:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185610-185718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185337-185526:-1:exon

IL6R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IL6R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-6 receptor subunit alpha isoform X3
translation: MARPPPPLLLGLLLLRLLLQLAAAGRPCGPTGLSRDTVLGRLGANITLTCQDKVPANATVLWQVEEQGSAGGWARRLAEGSMLLLRRLRYEDSGRYSCSVGSHLLRSLRLLVAAPPCLAEPPETPQVSCYRRSHDKDILCEWPQQERPSPGTRAMLWVKRRFVAENGTEQRCRYFSKARKFSCRVKVPPGTDDTKHLVVSTCVSNSAGGSAGKDKIITLSGVLKPDPPINVTVEALEKAPQRLRVNWSYPSSWDPRFYWLRFQVRYRPEPAPAFMEVDQVTTTWLDIHDAWHGTRHVVQVRAKDEFGHGAWSEWSQEAVGTPWTDPRDLTSEMEPFSSQLPMEDGTYGVTLPPELFGEDHANSAGGSVMEPSTHPVASPYAFLVTGGSLLLGIALFVGIVVRYRQMWWTNEQERTKPEGEGQHMLVPLGLPLPTLNDTPLLSHSSPSAPGMLHITHSDYSSSGQ
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(185337..185526,185610..185718,185809..185887,186015..186058,186143..186287,186363..186523,186605..186789,187143..187284,187347..187592,188291..188384))
location: region:185337-188384:-1
so has part: feature:188291-188384:-1:exon
so has part: feature:187347-187592:-1:exon
so has part: feature:187143-187284:-1:exon
so has part: feature:186605-186789:-1:exon
so has part: feature:186363-186523:-1:exon
so has part: feature:186143-186287:-1:exon
so has part: feature:186015-186058:-1:exon
so has part: feature:185809-185887:-1:exon
so has part: feature:185610-185718:-1:exon
so has part: feature:185337-185526:-1:exon

XP_031949407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188291-188384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187347-187592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187143-187284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186605-186789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186363-186523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186143-186287:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186015-186058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185809-185887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185610-185718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:185337-185526:-1:exon

IL6R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IL6R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-6 receptor subunit alpha isoform X2
translation: MARPPPPLLLGLLLLRLLLQLAAAGRPCGPTGLSRDTVLGRLGANITLTCQDKVPANATVLWQVEEQGSAGGWARRLAEGSMLLLRRLRYEDSGRYSCSVGSHLLRSLRLLVAAPPCLAEPPETPQVSCYRRSHDKDILCEWPQQERPSPGTRAMLWVKRRFVAENGTEQRCRYFSKARKFSCRVKVPPGTDDTKHLVVSTCVSNSAGGSAGKDKIITLSGVPVKPDPPINVTVEALEKAPQRLRVNWSYPSSWDPRFYWLRFQVRYRPEPAPAFMEVDQVTTTWLDIHDAWHGTRHVVQVRAKDEFGHGAWSEWSQEAVGTPWTDPRDLTSEMEPFSSQLPMEDGTYGVTLPPELFGEDHANSAGGSVMEPSTHPVASPYAFLVTGGSLLLGIALFVGIVVRYRQMWWTNEQERTKPEGEGQHMLVPLGLPLPTLNDTPLLSHSSPSAPGMLHITHSDYSSSGQ
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(185337..185526,185610..185718,185809..185887,186015..186058,186143..186287,186363..186526,186605..186789,187143..187284,187347..187592,188291..188384))
location: region:185337-188384:-1
so has part: feature:188291-188384:-1:exon
so has part: feature:187347-187592:-1:exon
so has part: feature:187143-187284:-1:exon
so has part: feature:186605-186789:-1:exon
so has part: feature:186363-186526:-1:exon
so has part: feature:186143-186287:-1:exon
so has part: feature:186015-186058:-1:exon
so has part: feature:185809-185887:-1:exon
so has part: feature:185610-185718:-1:exon
so has part: feature:185337-185526:-1:exon

XP_031949406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188291-188384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187347-187592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187143-187284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186605-186789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186363-186526:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186143-186287:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:186015-186058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185809-185887:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185610-185718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:185337-185526:-1:exon

ATP8B2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189192..198614)
location: region:189192-198614:-1
so has part: feature:189192-198614:-1:exon
subclass of: SO_0000010

116436406
type: Gene
SIO_000068: ncbigene

position:189192:-1
position: 189192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198614:-1
position: 198614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189192-198614:-1:exon

ATP8B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP8B2
product: ATPase phospholipid transporting 8B2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_032093510.1
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(189192..189868,189961..190091,190179..190317,190404..190649,190833..190916,191210..191433,191622..191805,191892..192033,192152..192257,192382..192493,192573..192737,192891..193006,193212..193400,193470..193635,193711..193754,193929..194137,194836..195032,195106..195194,195273..195431,195640..195719,195846..195919,196297..196369,196486..196547,196697..196795,196920..197033,197674..197732,198517..198614))
location: region:189192-198614:-1
so has part: feature:198517-198614:-1:exon
so has part: feature:197674-197732:-1:exon
so has part: feature:196920-197033:-1:exon
so has part: feature:196697-196795:-1:exon
so has part: feature:196486-196547:-1:exon
so has part: feature:196297-196369:-1:exon
so has part: feature:195846-195919:-1:exon
so has part: feature:195640-195719:-1:exon
so has part: feature:195273-195431:-1:exon
so has part: feature:195106-195194:-1:exon
so has part: feature:194836-195032:-1:exon
so has part: feature:193929-194137:-1:exon
so has part: feature:193711-193754:-1:exon
so has part: feature:193470-193635:-1:exon
so has part: feature:193212-193400:-1:exon
so has part: feature:192891-193006:-1:exon
so has part: feature:192573-192737:-1:exon
so has part: feature:192382-192493:-1:exon
so has part: feature:192152-192257:-1:exon
so has part: feature:191892-192033:-1:exon
so has part: feature:191622-191805:-1:exon
so has part: feature:191210-191433:-1:exon
so has part: feature:190833-190916:-1:exon
so has part: feature:190404-190649:-1:exon
so has part: feature:190179-190317:-1:exon
so has part: feature:189961-190091:-1:exon
so has part: feature:189192-189868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198517-198614:-1:exon

position:198517:-1
position: 198517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197674-197732:-1:exon

position:197674:-1
position: 197674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197732:-1
position: 197732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196920-197033:-1:exon

position:196920:-1
position: 196920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197033:-1
position: 197033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:196697-196795:-1:exon

position:196697:-1
position: 196697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196795:-1
position: 196795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196486-196547:-1:exon

position:196486:-1
position: 196486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196547:-1
position: 196547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196297-196369:-1:exon

position:196297:-1
position: 196297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196369:-1
position: 196369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:195846-195919:-1:exon

position:195846:-1
position: 195846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195919:-1
position: 195919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:195640-195719:-1:exon

position:195640:-1
position: 195640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195719:-1
position: 195719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:195273-195431:-1:exon

position:195273:-1
position: 195273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195431:-1
position: 195431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:195106-195194:-1:exon

position:195106:-1
position: 195106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195194:-1
position: 195194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:194836-195032:-1:exon

position:194836:-1
position: 194836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195032:-1
position: 195032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:193929-194137:-1:exon

position:193929:-1
position: 193929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194137:-1
position: 194137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:193711-193754:-1:exon

position:193711:-1
position: 193711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193754:-1
position: 193754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:193470-193635:-1:exon

position:193470:-1
position: 193470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193635:-1
position: 193635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:193212-193400:-1:exon

position:193212:-1
position: 193212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193400:-1
position: 193400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:192891-193006:-1:exon

position:192891:-1
position: 192891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193006:-1
position: 193006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:192573-192737:-1:exon

position:192573:-1
position: 192573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192737:-1
position: 192737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:192382-192493:-1:exon

position:192382:-1
position: 192382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192493:-1
position: 192493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:192152-192257:-1:exon

position:192152:-1
position: 192152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192257:-1
position: 192257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:191892-192033:-1:exon

position:191892:-1
position: 191892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192033:-1
position: 192033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:191622-191805:-1:exon

position:191622:-1
position: 191622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191805:-1
position: 191805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:191210-191433:-1:exon

position:191210:-1
position: 191210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191433:-1
position: 191433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:190833-190916:-1:exon

position:190833:-1
position: 190833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190916:-1
position: 190916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:190404-190649:-1:exon

position:190404:-1
position: 190404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190649:-1
position: 190649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:190179-190317:-1:exon

position:190179:-1
position: 190179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190317:-1
position: 190317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:189961-190091:-1:exon

position:189961:-1
position: 189961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190091:-1
position: 190091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:189192-189868:-1:exon

position:189868:-1
position: 189868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP8B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP8B2
product: ATPase phospholipid transporting 8B2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_032093508.1
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(189192..189868,189961..190091,190179..190317,190404..190649,190833..190916,191210..191433,191622..191805,191892..192033,192152..192257,192382..192493,192573..192737,192891..193006,193212..193400,193470..193635,193711..193754,193929..194137,194836..195032,195106..195194,195273..195431,195640..195719,195846..195916,196297..196369,196486..196547,196697..196795,196920..197033,197674..197732,198037..198148))
location: region:189192-198148:-1
so has part: feature:198037-198148:-1:exon
so has part: feature:197674-197732:-1:exon
so has part: feature:196920-197033:-1:exon
so has part: feature:196697-196795:-1:exon
so has part: feature:196486-196547:-1:exon
so has part: feature:196297-196369:-1:exon
so has part: feature:195846-195916:-1:exon
so has part: feature:195640-195719:-1:exon
so has part: feature:195273-195431:-1:exon
so has part: feature:195106-195194:-1:exon
so has part: feature:194836-195032:-1:exon
so has part: feature:193929-194137:-1:exon
so has part: feature:193711-193754:-1:exon
so has part: feature:193470-193635:-1:exon
so has part: feature:193212-193400:-1:exon
so has part: feature:192891-193006:-1:exon
so has part: feature:192573-192737:-1:exon
so has part: feature:192382-192493:-1:exon
so has part: feature:192152-192257:-1:exon
so has part: feature:191892-192033:-1:exon
so has part: feature:191622-191805:-1:exon
so has part: feature:191210-191433:-1:exon
so has part: feature:190833-190916:-1:exon
so has part: feature:190404-190649:-1:exon
so has part: feature:190179-190317:-1:exon
so has part: feature:189961-190091:-1:exon
so has part: feature:189192-189868:-1:exon

position:198148:-1
position: 198148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198037-198148:-1:exon

position:198037:-1
position: 198037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197674-197732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196920-197033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196697-196795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196486-196547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196297-196369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195846-195916:-1:exon

position:195916:-1
position: 195916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:195640-195719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195273-195431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195106-195194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194836-195032:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193929-194137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193711-193754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193470-193635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:193212-193400:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192891-193006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192573-192737:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192382-192493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:192152-192257:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191892-192033:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191622-191805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:191210-191433:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190833-190916:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190404-190649:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:190179-190317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:189961-190091:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:189192-189868:-1:exon

ATP8B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP8B2
product: ATPase phospholipid transporting 8B2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_032093511.1
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(189192..189868,189961..190091,190179..190317,190404..190649,190833..190916,191210..191433,191622..191805,191892..192033,192152..192257,192382..192493,192573..192737,192891..193006,193212..193400,193470..193635,193711..193754,193929..194137,194836..194948,195106..195194,195273..195431,195640..195719,195846..195919,196297..196369,196486..196547,196697..196795,196920..197033,197674..197732,198037..198148))
location: region:189192-198148:-1
so has part: feature:198037-198148:-1:exon
so has part: feature:197674-197732:-1:exon
so has part: feature:196920-197033:-1:exon
so has part: feature:196697-196795:-1:exon
so has part: feature:196486-196547:-1:exon
so has part: feature:196297-196369:-1:exon
so has part: feature:195846-195919:-1:exon
so has part: feature:195640-195719:-1:exon
so has part: feature:195273-195431:-1:exon
so has part: feature:195106-195194:-1:exon
so has part: feature:194836-194948:-1:exon
so has part: feature:193929-194137:-1:exon
so has part: feature:193711-193754:-1:exon
so has part: feature:193470-193635:-1:exon
so has part: feature:193212-193400:-1:exon
so has part: feature:192891-193006:-1:exon
so has part: feature:192573-192737:-1:exon
so has part: feature:192382-192493:-1:exon
so has part: feature:192152-192257:-1:exon
so has part: feature:191892-192033:-1:exon
so has part: feature:191622-191805:-1:exon
so has part: feature:191210-191433:-1:exon
so has part: feature:190833-190916:-1:exon
so has part: feature:190404-190649:-1:exon
so has part: feature:190179-190317:-1:exon
so has part: feature:189961-190091:-1:exon
so has part: feature:189192-189868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198037-198148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197674-197732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196920-197033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196697-196795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196486-196547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196297-196369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195846-195919:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195640-195719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195273-195431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195106-195194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194836-194948:-1:exon

position:194948:-1
position: 194948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:193929-194137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193711-193754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193470-193635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:193212-193400:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192891-193006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192573-192737:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192382-192493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:192152-192257:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191892-192033:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191622-191805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:191210-191433:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190833-190916:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190404-190649:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:190179-190317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:189961-190091:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:189192-189868:-1:exon

ATP8B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP8B2
product: ATPase phospholipid transporting 8B2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_032093507.1
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(189192..189868,189961..190091,190179..190317,190404..190649,190833..190916,191210..191433,191622..191805,191892..192033,192152..192257,192382..192493,192573..192737,192891..193006,193212..193400,193470..193635,193711..193754,193929..194137,194836..195032,195106..195194,195273..195431,195640..195719,195846..195919,196297..196369,196486..196547,196697..196795,196920..197033,197674..197732,198037..198148))
location: region:189192-198148:-1
so has part: feature:198037-198148:-1:exon
so has part: feature:197674-197732:-1:exon
so has part: feature:196920-197033:-1:exon
so has part: feature:196697-196795:-1:exon
so has part: feature:196486-196547:-1:exon
so has part: feature:196297-196369:-1:exon
so has part: feature:195846-195919:-1:exon
so has part: feature:195640-195719:-1:exon
so has part: feature:195273-195431:-1:exon
so has part: feature:195106-195194:-1:exon
so has part: feature:194836-195032:-1:exon
so has part: feature:193929-194137:-1:exon
so has part: feature:193711-193754:-1:exon
so has part: feature:193470-193635:-1:exon
so has part: feature:193212-193400:-1:exon
so has part: feature:192891-193006:-1:exon
so has part: feature:192573-192737:-1:exon
so has part: feature:192382-192493:-1:exon
so has part: feature:192152-192257:-1:exon
so has part: feature:191892-192033:-1:exon
so has part: feature:191622-191805:-1:exon
so has part: feature:191210-191433:-1:exon
so has part: feature:190833-190916:-1:exon
so has part: feature:190404-190649:-1:exon
so has part: feature:190179-190317:-1:exon
so has part: feature:189961-190091:-1:exon
so has part: feature:189192-189868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198037-198148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197674-197732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196920-197033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196697-196795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196486-196547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196297-196369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195846-195919:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195640-195719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195273-195431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195106-195194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194836-195032:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193929-194137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193711-193754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193470-193635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:193212-193400:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192891-193006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192573-192737:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192382-192493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:192152-192257:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191892-192033:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191622-191805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:191210-191433:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190833-190916:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190404-190649:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:190179-190317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:189961-190091:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:189192-189868:-1:exon

ATP8B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP8B2
product: ATPase phospholipid transporting 8B2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_032093512.1
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(189192..189868,189961..190091,190179..190317,190404..190649,190833..190916,191210..191433,191622..191805,191892..192033,192152..192257,192382..192493,192573..192737,192891..193006,193212..193400,193470..193635,193711..193754,193929..194137,194836..195032,195106..195194,195273..195431,195640..195719,195846..195916,196297..196369,196486..196547,196697..196795,196920..197033,197681..197704))
location: region:189192-197704:-1
so has part: feature:197681-197704:-1:exon
so has part: feature:196920-197033:-1:exon
so has part: feature:196697-196795:-1:exon
so has part: feature:196486-196547:-1:exon
so has part: feature:196297-196369:-1:exon
so has part: feature:195846-195916:-1:exon
so has part: feature:195640-195719:-1:exon
so has part: feature:195273-195431:-1:exon
so has part: feature:195106-195194:-1:exon
so has part: feature:194836-195032:-1:exon
so has part: feature:193929-194137:-1:exon
so has part: feature:193711-193754:-1:exon
so has part: feature:193470-193635:-1:exon
so has part: feature:193212-193400:-1:exon
so has part: feature:192891-193006:-1:exon
so has part: feature:192573-192737:-1:exon
so has part: feature:192382-192493:-1:exon
so has part: feature:192152-192257:-1:exon
so has part: feature:191892-192033:-1:exon
so has part: feature:191622-191805:-1:exon
so has part: feature:191210-191433:-1:exon
so has part: feature:190833-190916:-1:exon
so has part: feature:190404-190649:-1:exon
so has part: feature:190179-190317:-1:exon
so has part: feature:189961-190091:-1:exon
so has part: feature:189192-189868:-1:exon

position:197704:-1
position: 197704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197681-197704:-1:exon

position:197681:-1
position: 197681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196920-197033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196697-196795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196486-196547:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196297-196369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195846-195916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195640-195719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195273-195431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195106-195194:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194836-195032:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193929-194137:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193711-193754:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193470-193635:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193212-193400:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:192891-193006:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192573-192737:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192382-192493:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192152-192257:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:191892-192033:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191622-191805:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191210-191433:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:190833-190916:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190404-190649:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190179-190317:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:189961-190091:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:189192-189868:-1:exon

ATP8B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ID isoform X3
translation: MERCAARRAPEEERRVRANAREYNEKFQYASNCIKTSKYNIVTFLPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVLIGGVLRQEQWMNVRVGDIIKLENNQFVAQADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTAELGDTSKLARFDGEVICEPPNNKLDKFGGTLYWKENKYPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGICFQIYLPWDEGVHSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMYCAKRQTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFSKCSVNGHSYGDVQDMLGHKAELGERPEPVNFSFNPLADPRFQFWDPSLLEAVKLGDLHVHEFFRLLSLCHTVMSEEKSEGELLYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGQAITYQLLAILDFNNIRKRMSVIVRSPEGKIRLYCKGADTILLERLHPVNQDLTSITTDHLNEYAGEGLRTLVLAYKDLEESYYKDWSERLHRAGSAPEAREDHLARLYDEVEHDMMLLGATAIEDKLQQGVPETIAILTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFVVTGHTVLEVREELRKAREKMMDASRSVCNGFSYQEKLPSKLTSVLEAIAGEYALVINGHSLAHALEADMEVEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGAQLADYQSFAVTVATSLVIVVSVQIGLDTGFWTAINHFFIWGSLAAYFAILFTMHSDGLFRVFPNQFRFVGNAQNTLAQPTVWLTIALTTVVCIMPVVAFRFLKLDLKPELSDTVRYTQLVRKKQKTQHRCMRRAGHVGSRRSGYAFSHQEGFGELIMSGKNMRLSSLALSSFAPRPSTSWIETLRKKKGCEGSSVGSPSGAASKTLKV
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(189581..189868,189961..190091,190179..190317,190404..190649,190833..190916,191210..191433,191622..191805,191892..192033,192152..192257,192382..192493,192573..192737,192891..193006,193212..193400,193470..193635,193711..193754,193929..194137,194836..195032,195106..195194,195273..195431,195640..195719,195846..195919,196297..196369,196486..196547,196697..196795,196920..197033,197674..197732,198517..198547))
location: region:189581-198547:-1
so has part: feature:198517-198547:-1:exon
so has part: feature:197674-197732:-1:exon
so has part: feature:196920-197033:-1:exon
so has part: feature:196697-196795:-1:exon
so has part: feature:196486-196547:-1:exon
so has part: feature:196297-196369:-1:exon
so has part: feature:195846-195919:-1:exon
so has part: feature:195640-195719:-1:exon
so has part: feature:195273-195431:-1:exon
so has part: feature:195106-195194:-1:exon
so has part: feature:194836-195032:-1:exon
so has part: feature:193929-194137:-1:exon
so has part: feature:193711-193754:-1:exon
so has part: feature:193470-193635:-1:exon
so has part: feature:193212-193400:-1:exon
so has part: feature:192891-193006:-1:exon
so has part: feature:192573-192737:-1:exon
so has part: feature:192382-192493:-1:exon
so has part: feature:192152-192257:-1:exon
so has part: feature:191892-192033:-1:exon
so has part: feature:191622-191805:-1:exon
so has part: feature:191210-191433:-1:exon
so has part: feature:190833-190916:-1:exon
so has part: feature:190404-190649:-1:exon
so has part: feature:190179-190317:-1:exon
so has part: feature:189961-190091:-1:exon
so has part: feature:189581-189868:-1:exon

XP_031949401.1
type: Protein
SIO_000068: ncbiprotein

position:189581:-1
position: 189581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198547:-1
position: 198547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198517-198547:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197674-197732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196920-197033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196697-196795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196486-196547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196297-196369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195846-195919:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195640-195719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195273-195431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195106-195194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194836-195032:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193929-194137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193711-193754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193470-193635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:193212-193400:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192891-193006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192573-192737:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192382-192493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:192152-192257:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191892-192033:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191622-191805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:191210-191433:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190833-190916:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190404-190649:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:190179-190317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:189961-190091:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:189581-189868:-1:exon

ATP8B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ID isoform X2
translation: MQGWKGLVTSGCRAGGADKPDARCGIWGSGSTEEERRVRANAREYNEKFQYASNCIKTSKYNIVTFLPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVLIGGVLRQEQWMNVRVGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTAELGDTSKLARFDGEVICEPPNNKLDKFGGTLYWKENKYPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGICFQIYLPWDEGVHSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMYCAKRQTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFSKCSVNGHSYGDVQDMLGHKAELGERPEPVNFSFNPLADPRFQFWDPSLLEAVKLGDLHVHEFFRLLSLCHTVMSEEKSEGELLYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGQAITYQLLAILDFNNIRKRMSVIVRSPEGKIRLYCKGADTILLERLHPVNQDLTSITTDHLNEYAGEGLRTLVLAYKDLEESYYKDWSERLHRAGSAPEAREDHLARLYDEVEHDMMLLGATAIEDKLQQGVPETIAILTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFVVTGHTVLEVREELRKAREKMMDASRSVCNGFSYQEKLPSKLTSVLEAIAGEYALVINGHSLAHALEADMEVEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGAQLADYQSFAVTVATSLVIVVSVQIGLDTGFWTAINHFFIWGSLAAYFAILFTMHSDGLFRVFPNQFRFVGNAQNTLAQPTVWLTIALTTVVCIMPVVAFRFLKLDLKPELSDTVRYTQLVRKKQKTQHRCMRRAGHVGSRRSGYAFSHQEGFGELIMSGKNMRLSSLALSSFAPRPSTSWIETLRKKKGCEGSSVGSPSGAASKTLKV
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(189581..189868,189961..190091,190179..190317,190404..190649,190833..190916,191210..191433,191622..191805,191892..192033,192152..192257,192382..192493,192573..192737,192891..193006,193212..193400,193470..193635,193711..193754,193929..194137,194836..195032,195106..195194,195273..195431,195640..195719,195846..195916,196297..196369,196486..196547,196697..196795,196920..197033,197674..197732,198037..198133))
location: region:189581-198133:-1
so has part: feature:198037-198133:-1:exon
so has part: feature:197674-197732:-1:exon
so has part: feature:196920-197033:-1:exon
so has part: feature:196697-196795:-1:exon
so has part: feature:196486-196547:-1:exon
so has part: feature:196297-196369:-1:exon
so has part: feature:195846-195916:-1:exon
so has part: feature:195640-195719:-1:exon
so has part: feature:195273-195431:-1:exon
so has part: feature:195106-195194:-1:exon
so has part: feature:194836-195032:-1:exon
so has part: feature:193929-194137:-1:exon
so has part: feature:193711-193754:-1:exon
so has part: feature:193470-193635:-1:exon
so has part: feature:193212-193400:-1:exon
so has part: feature:192891-193006:-1:exon
so has part: feature:192573-192737:-1:exon
so has part: feature:192382-192493:-1:exon
so has part: feature:192152-192257:-1:exon
so has part: feature:191892-192033:-1:exon
so has part: feature:191622-191805:-1:exon
so has part: feature:191210-191433:-1:exon
so has part: feature:190833-190916:-1:exon
so has part: feature:190404-190649:-1:exon
so has part: feature:190179-190317:-1:exon
so has part: feature:189961-190091:-1:exon
so has part: feature:189581-189868:-1:exon

XP_031949399.1
type: Protein
SIO_000068: ncbiprotein

position:198133:-1
position: 198133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198037-198133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197674-197732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196920-197033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196697-196795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196486-196547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196297-196369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195846-195916:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195640-195719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195273-195431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195106-195194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194836-195032:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193929-194137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193711-193754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193470-193635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:193212-193400:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192891-193006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192573-192737:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192382-192493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:192152-192257:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191892-192033:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191622-191805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:191210-191433:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190833-190916:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190404-190649:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:190179-190317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:189961-190091:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:189581-189868:-1:exon

ATP8B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ID isoform X4
translation: MQGWKGLVTSGCRAGGADKPDARCGIWGSGSTEEERRVRANAREYNEKFQYASNCIKTSKYNIVTFLPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVLIGGVLRQEQWMNVRVGDIIKLENNQFVAQADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTAELGDTSKLARFDGEVICEPPNNKLDKFGGTLYWKENKYPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIYLPWDEGVHSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMYCAKRQTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFSKCSVNGHSYGDVQDMLGHKAELGERPEPVNFSFNPLADPRFQFWDPSLLEAVKLGDLHVHEFFRLLSLCHTVMSEEKSEGELLYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGQAITYQLLAILDFNNIRKRMSVIVRSPEGKIRLYCKGADTILLERLHPVNQDLTSITTDHLNEYAGEGLRTLVLAYKDLEESYYKDWSERLHRAGSAPEAREDHLARLYDEVEHDMMLLGATAIEDKLQQGVPETIAILTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFVVTGHTVLEVREELRKAREKMMDASRSVCNGFSYQEKLPSKLTSVLEAIAGEYALVINGHSLAHALEADMEVEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGAQLADYQSFAVTVATSLVIVVSVQIGLDTGFWTAINHFFIWGSLAAYFAILFTMHSDGLFRVFPNQFRFVGNAQNTLAQPTVWLTIALTTVVCIMPVVAFRFLKLDLKPELSDTVRYTQLVRKKQKTQHRCMRRAGHVGSRRSGYAFSHQEGFGELIMSGKNMRLSSLALSSFAPRPSTSWIETLRKKKGCEGSSVGSPSGAASKTLKV
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(189581..189868,189961..190091,190179..190317,190404..190649,190833..190916,191210..191433,191622..191805,191892..192033,192152..192257,192382..192493,192573..192737,192891..193006,193212..193400,193470..193635,193711..193754,193929..194137,194836..194948,195106..195194,195273..195431,195640..195719,195846..195919,196297..196369,196486..196547,196697..196795,196920..197033,197674..197732,198037..198133))
location: region:189581-198133:-1
so has part: feature:198037-198133:-1:exon
so has part: feature:197674-197732:-1:exon
so has part: feature:196920-197033:-1:exon
so has part: feature:196697-196795:-1:exon
so has part: feature:196486-196547:-1:exon
so has part: feature:196297-196369:-1:exon
so has part: feature:195846-195919:-1:exon
so has part: feature:195640-195719:-1:exon
so has part: feature:195273-195431:-1:exon
so has part: feature:195106-195194:-1:exon
so has part: feature:194836-194948:-1:exon
so has part: feature:193929-194137:-1:exon
so has part: feature:193711-193754:-1:exon
so has part: feature:193470-193635:-1:exon
so has part: feature:193212-193400:-1:exon
so has part: feature:192891-193006:-1:exon
so has part: feature:192573-192737:-1:exon
so has part: feature:192382-192493:-1:exon
so has part: feature:192152-192257:-1:exon
so has part: feature:191892-192033:-1:exon
so has part: feature:191622-191805:-1:exon
so has part: feature:191210-191433:-1:exon
so has part: feature:190833-190916:-1:exon
so has part: feature:190404-190649:-1:exon
so has part: feature:190179-190317:-1:exon
so has part: feature:189961-190091:-1:exon
so has part: feature:189581-189868:-1:exon

XP_031949402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198037-198133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197674-197732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196920-197033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196697-196795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196486-196547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196297-196369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195846-195919:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195640-195719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195273-195431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195106-195194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194836-194948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193929-194137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193711-193754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193470-193635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:193212-193400:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192891-193006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192573-192737:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192382-192493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:192152-192257:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191892-192033:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191622-191805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:191210-191433:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190833-190916:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190404-190649:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:190179-190317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:189961-190091:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:189581-189868:-1:exon

ATP8B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ID isoform X1
translation: MQGWKGLVTSGCRAGGADKPDARCGIWGSGSTEEERRVRANAREYNEKFQYASNCIKTSKYNIVTFLPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVLIGGVLRQEQWMNVRVGDIIKLENNQFVAQADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTAELGDTSKLARFDGEVICEPPNNKLDKFGGTLYWKENKYPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGICFQIYLPWDEGVHSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMYCAKRQTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFSKCSVNGHSYGDVQDMLGHKAELGERPEPVNFSFNPLADPRFQFWDPSLLEAVKLGDLHVHEFFRLLSLCHTVMSEEKSEGELLYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGQAITYQLLAILDFNNIRKRMSVIVRSPEGKIRLYCKGADTILLERLHPVNQDLTSITTDHLNEYAGEGLRTLVLAYKDLEESYYKDWSERLHRAGSAPEAREDHLARLYDEVEHDMMLLGATAIEDKLQQGVPETIAILTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFVVTGHTVLEVREELRKAREKMMDASRSVCNGFSYQEKLPSKLTSVLEAIAGEYALVINGHSLAHALEADMEVEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGAQLADYQSFAVTVATSLVIVVSVQIGLDTGFWTAINHFFIWGSLAAYFAILFTMHSDGLFRVFPNQFRFVGNAQNTLAQPTVWLTIALTTVVCIMPVVAFRFLKLDLKPELSDTVRYTQLVRKKQKTQHRCMRRAGHVGSRRSGYAFSHQEGFGELIMSGKNMRLSSLALSSFAPRPSTSWIETLRKKKGCEGSSVGSPSGAASKTLKV
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(189581..189868,189961..190091,190179..190317,190404..190649,190833..190916,191210..191433,191622..191805,191892..192033,192152..192257,192382..192493,192573..192737,192891..193006,193212..193400,193470..193635,193711..193754,193929..194137,194836..195032,195106..195194,195273..195431,195640..195719,195846..195919,196297..196369,196486..196547,196697..196795,196920..197033,197674..197732,198037..198133))
location: region:189581-198133:-1
so has part: feature:198037-198133:-1:exon
so has part: feature:197674-197732:-1:exon
so has part: feature:196920-197033:-1:exon
so has part: feature:196697-196795:-1:exon
so has part: feature:196486-196547:-1:exon
so has part: feature:196297-196369:-1:exon
so has part: feature:195846-195919:-1:exon
so has part: feature:195640-195719:-1:exon
so has part: feature:195273-195431:-1:exon
so has part: feature:195106-195194:-1:exon
so has part: feature:194836-195032:-1:exon
so has part: feature:193929-194137:-1:exon
so has part: feature:193711-193754:-1:exon
so has part: feature:193470-193635:-1:exon
so has part: feature:193212-193400:-1:exon
so has part: feature:192891-193006:-1:exon
so has part: feature:192573-192737:-1:exon
so has part: feature:192382-192493:-1:exon
so has part: feature:192152-192257:-1:exon
so has part: feature:191892-192033:-1:exon
so has part: feature:191622-191805:-1:exon
so has part: feature:191210-191433:-1:exon
so has part: feature:190833-190916:-1:exon
so has part: feature:190404-190649:-1:exon
so has part: feature:190179-190317:-1:exon
so has part: feature:189961-190091:-1:exon
so has part: feature:189581-189868:-1:exon

XP_031949398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:198037-198133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197674-197732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196920-197033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196697-196795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196486-196547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196297-196369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195846-195919:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195640-195719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195273-195431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195106-195194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194836-195032:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193929-194137:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:193711-193754:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:193470-193635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:193212-193400:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192891-193006:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:192573-192737:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:192382-192493:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:192152-192257:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:191892-192033:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:191622-191805:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:191210-191433:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:190833-190916:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:190404-190649:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:190179-190317:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:189961-190091:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:189581-189868:-1:exon

ATP8B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ID isoform X5
translation: MNVRVGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTAELGDTSKLARFDGEVICEPPNNKLDKFGGTLYWKENKYPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGICFQIYLPWDEGVHSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMYCAKRQTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFSKCSVNGHSYGDVQDMLGHKAELGERPEPVNFSFNPLADPRFQFWDPSLLEAVKLGDLHVHEFFRLLSLCHTVMSEEKSEGELLYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGQAITYQLLAILDFNNIRKRMSVIVRSPEGKIRLYCKGADTILLERLHPVNQDLTSITTDHLNEYAGEGLRTLVLAYKDLEESYYKDWSERLHRAGSAPEAREDHLARLYDEVEHDMMLLGATAIEDKLQQGVPETIAILTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFVVTGHTVLEVREELRKAREKMMDASRSVCNGFSYQEKLPSKLTSVLEAIAGEYALVINGHSLAHALEADMEVEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGAQLADYQSFAVTVATSLVIVVSVQIGLDTGFWTAINHFFIWGSLAAYFAILFTMHSDGLFRVFPNQFRFVGNAQNTLAQPTVWLTIALTTVVCIMPVVAFRFLKLDLKPELSDTVRYTQLVRKKQKTQHRCMRRAGHVGSRRSGYAFSHQEGFGELIMSGKNMRLSSLALSSFAPRPSTSWIETLRKKKGCEGSSVGSPSGAASKTLKV
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(189581..189868,189961..190091,190179..190317,190404..190649,190833..190916,191210..191433,191622..191805,191892..192033,192152..192257,192382..192493,192573..192737,192891..193006,193212..193400,193470..193635,193711..193754,193929..194137,194836..195032,195106..195194,195273..195431,195640..195719,195846..195916,196297..196350))
location: region:189581-196350:-1
so has part: feature:196297-196350:-1:exon
so has part: feature:195846-195916:-1:exon
so has part: feature:195640-195719:-1:exon
so has part: feature:195273-195431:-1:exon
so has part: feature:195106-195194:-1:exon
so has part: feature:194836-195032:-1:exon
so has part: feature:193929-194137:-1:exon
so has part: feature:193711-193754:-1:exon
so has part: feature:193470-193635:-1:exon
so has part: feature:193212-193400:-1:exon
so has part: feature:192891-193006:-1:exon
so has part: feature:192573-192737:-1:exon
so has part: feature:192382-192493:-1:exon
so has part: feature:192152-192257:-1:exon
so has part: feature:191892-192033:-1:exon
so has part: feature:191622-191805:-1:exon
so has part: feature:191210-191433:-1:exon
so has part: feature:190833-190916:-1:exon
so has part: feature:190404-190649:-1:exon
so has part: feature:190179-190317:-1:exon
so has part: feature:189961-190091:-1:exon
so has part: feature:189581-189868:-1:exon

XP_031949403.1
type: Protein
SIO_000068: ncbiprotein

position:196350:-1
position: 196350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196297-196350:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195846-195916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195640-195719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195273-195431:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195106-195194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194836-195032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193929-194137:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193711-193754:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193470-193635:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193212-193400:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192891-193006:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192573-192737:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:192382-192493:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:192152-192257:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:191892-192033:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:191622-191805:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:191210-191433:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:190833-190916:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:190404-190649:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:190179-190317:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:189961-190091:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:189581-189868:-1:exon

AQP10
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: AQP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(199048..201577)
location: region:199048-201577:-1
so has part: feature:199048-201577:-1:exon
subclass of: SO_0000010

116436413
type: Gene
SIO_000068: ncbigene

position:199048:-1
position: 199048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201577:-1
position: 201577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199048-201577:-1:exon

AQP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: AQP10
product: aquaporin 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093521.1
SIO_010081: AQP10
subclass of: SO_0000673
so part of: AQP10
location: complement(join(199048..199344,199415..199632,199714..199832,199920..200057,200153..200279,200933..201042,201074..201577))
location: region:199048-201577:-1
so has part: feature:201074-201577:-1:exon
so has part: feature:200933-201042:-1:exon
so has part: feature:200153-200279:-1:exon
so has part: feature:199920-200057:-1:exon
so has part: feature:199714-199832:-1:exon
so has part: feature:199415-199632:-1:exon
so has part: feature:199048-199344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201074-201577:-1:exon

position:201074:-1
position: 201074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200933-201042:-1:exon

position:200933:-1
position: 200933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201042:-1
position: 201042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:200153-200279:-1:exon

position:200153:-1
position: 200153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200279:-1
position: 200279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:199920-200057:-1:exon

position:199920:-1
position: 199920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200057:-1
position: 200057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:199714-199832:-1:exon

position:199714:-1
position: 199714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199832:-1
position: 199832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199415-199632:-1:exon

position:199415:-1
position: 199415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199632:-1
position: 199632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:199048-199344:-1:exon

position:199344:-1
position: 199344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AQP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: AQP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aquaporin-10
translation: MRYLHHPHCCRCCHCCCHPLMGTTSFLSRARALLRIRNQLVRECLAELLSTFVLIIITLSGAAQKITSFEMKGNLLTSYLAGALAVMAGIYIAGGISGAHMNPAFSFAMCLMEQFPWWKFPIFMFVQTLASFLSAGAVYILYYDAIWHYSNGTLTVSGPRETASIFATYPADYVSIANGFLDQVIGTGVLILVIMGIMDTRNKAVPKGLEPVVVALLVLSIESSMGSNCGCPLNPARDIGPRLFTYVAGWGPEVFSRGNGWWWVPLVAPLLGAAVGAFLYQLFVAFHYPEEDSDVLTEQGSIVLVNTTIDPDIGMLPKEKDTGGTVPAGYPPPPCASSTVSPTVPNTPLKKS
SIO_010081: AQP10
subclass of: SO_0000673
so part of: AQP10
location: complement(join(199053..199344,199415..199632,199714..199832,199920..200057,200153..200279,200933..201042,201074..201128))
location: region:199053-201128:-1
so has part: feature:201074-201128:-1:exon
so has part: feature:200933-201042:-1:exon
so has part: feature:200153-200279:-1:exon
so has part: feature:199920-200057:-1:exon
so has part: feature:199714-199832:-1:exon
so has part: feature:199415-199632:-1:exon
so has part: feature:199053-199344:-1:exon

XP_031949412.1
type: Protein
SIO_000068: ncbiprotein

position:199053:-1
position: 199053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201128:-1
position: 201128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201074-201128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200933-201042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200153-200279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:199920-200057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199714-199832:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199415-199632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:199053-199344:-1:exon

HAX1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: HAX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(201660..203455)
location: region:201660-203455:-1
so has part: feature:201660-203455:-1:exon
subclass of: SO_0000010

116436411
type: Gene
SIO_000068: ncbigene

position:201660:-1
position: 201660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203455:-1
position: 203455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201660-203455:-1:exon

HAX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: HAX1
product: HCLS1 associated protein X-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093519.1
SIO_010081: HAX1
subclass of: SO_0000673
so part of: HAX1
location: complement(join(201660..201799,201888..202046,202118..202268,202363..202478,202589..202634,202744..202895,202976..203178,203339..203455))
location: region:201660-203455:-1
so has part: feature:203339-203455:-1:exon
so has part: feature:202976-203178:-1:exon
so has part: feature:202744-202895:-1:exon
so has part: feature:202589-202634:-1:exon
so has part: feature:202363-202478:-1:exon
so has part: feature:202118-202268:-1:exon
so has part: feature:201888-202046:-1:exon
so has part: feature:201660-201799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203339-203455:-1:exon

position:203339:-1
position: 203339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:202976-203178:-1:exon

position:202976:-1
position: 202976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203178:-1
position: 203178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202744-202895:-1:exon

position:202744:-1
position: 202744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202895:-1
position: 202895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202589-202634:-1:exon

position:202589:-1
position: 202589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202634:-1
position: 202634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:202363-202478:-1:exon

position:202363:-1
position: 202363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202478:-1
position: 202478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:202118-202268:-1:exon

position:202118:-1
position: 202118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202268:-1
position: 202268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:201888-202046:-1:exon

position:201888:-1
position: 201888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202046:-1
position: 202046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:201660-201799:-1:exon

position:201799:-1
position: 201799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: HAX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HCLS1-associated protein X-1
translation: MSFYDAFRGFFGFPGRCRPRDPLFGGAAWDEEEEDGGPSMSQPPQDFGFGFSPGSPRGAFEELFRDMGELLGVFGGFWADPQQPFESALPGPDGGSAGRPLRDSMLKHPESAPASAAPGSSGSAGDLARPWRPFLGLEDAHRAPPGLKEDQDLDSQVSSVGLGTVLRPNEPKSHSYFQSVSVTKVTLPDGAVEERRTVQDSQGRRETTVTRRRGDQAFITTTKEDGHNKDYREDVVNMDDQELAQFAGTWPQQDELHAPNLSDPSSALGSFFRRWFSSW
SIO_010081: HAX1
subclass of: SO_0000673
so part of: HAX1
location: complement(join(201928..202046,202118..202268,202363..202478,202589..202634,202744..202895,202976..203178,203339..203391))
location: region:201928-203391:-1
so has part: feature:203339-203391:-1:exon
so has part: feature:202976-203178:-1:exon
so has part: feature:202744-202895:-1:exon
so has part: feature:202589-202634:-1:exon
so has part: feature:202363-202478:-1:exon
so has part: feature:202118-202268:-1:exon
so has part: feature:201928-202046:-1:exon

XP_031949410.1
type: Protein
SIO_000068: ncbiprotein

position:201928:-1
position: 201928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203391:-1
position: 203391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203339-203391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202976-203178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202744-202895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202589-202634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:202363-202478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202118-202268:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201928-202046:-1:exon

UBAP2L
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: UBAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(204712..231072)
location: region:204712-231072:-1
so has part: feature:204712-231072:-1:exon
subclass of: SO_0000010

116436407
type: Gene
SIO_000068: ncbigene

position:204712:-1
position: 204712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231072:-1
position: 231072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204712-231072:-1:exon

UBAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: UBAP2L
product: ubiquitin associated protein 2 like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_032093513.1
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(204712..205324,205828..205878,206339..206536,206831..206898,208023..208128,208217..208434,209572..209653,210238..210291,210926..211014,211121..211316,211948..212020,212199..212373,212824..212878,213481..213670,214390..214562,214845..215120,216318..216519,217376..217547,217991..218076,219542..219594,224554..224666,224946..224991,225698..225793,226117..226285,228702..228812,229956..230033,230598..231072))
location: region:204712-231072:-1
so has part: feature:230598-231072:-1:exon
so has part: feature:229956-230033:-1:exon
so has part: feature:228702-228812:-1:exon
so has part: feature:226117-226285:-1:exon
so has part: feature:225698-225793:-1:exon
so has part: feature:224946-224991:-1:exon
so has part: feature:224554-224666:-1:exon
so has part: feature:219542-219594:-1:exon
so has part: feature:217991-218076:-1:exon
so has part: feature:217376-217547:-1:exon
so has part: feature:216318-216519:-1:exon
so has part: feature:214845-215120:-1:exon
so has part: feature:214390-214562:-1:exon
so has part: feature:213481-213670:-1:exon
so has part: feature:212824-212878:-1:exon
so has part: feature:212199-212373:-1:exon
so has part: feature:211948-212020:-1:exon
so has part: feature:211121-211316:-1:exon
so has part: feature:210926-211014:-1:exon
so has part: feature:210238-210291:-1:exon
so has part: feature:209572-209653:-1:exon
so has part: feature:208217-208434:-1:exon
so has part: feature:208023-208128:-1:exon
so has part: feature:206831-206898:-1:exon
so has part: feature:206339-206536:-1:exon
so has part: feature:205828-205878:-1:exon
so has part: feature:204712-205324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230598-231072:-1:exon

position:230598:-1
position: 230598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:229956-230033:-1:exon

position:229956:-1
position: 229956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230033:-1
position: 230033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:228702-228812:-1:exon

position:228702:-1
position: 228702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228812:-1
position: 228812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226117-226285:-1:exon

position:226117:-1
position: 226117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226285:-1
position: 226285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:225698-225793:-1:exon

position:225698:-1
position: 225698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225793:-1
position: 225793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:224946-224991:-1:exon

position:224946:-1
position: 224946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224991:-1
position: 224991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:224554-224666:-1:exon

position:224554:-1
position: 224554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224666:-1
position: 224666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:219542-219594:-1:exon

position:219542:-1
position: 219542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219594:-1
position: 219594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:217991-218076:-1:exon

position:217991:-1
position: 217991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218076:-1
position: 218076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:217376-217547:-1:exon

position:217376:-1
position: 217376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217547:-1
position: 217547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:216318-216519:-1:exon

position:216318:-1
position: 216318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216519:-1
position: 216519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:214845-215120:-1:exon

position:214845:-1
position: 214845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215120:-1
position: 215120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:214390-214562:-1:exon

position:214390:-1
position: 214390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214562:-1
position: 214562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:213481-213670:-1:exon

position:213481:-1
position: 213481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213670:-1
position: 213670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:212824-212878:-1:exon

position:212824:-1
position: 212824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212878:-1
position: 212878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:212199-212373:-1:exon

position:212199:-1
position: 212199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212373:-1
position: 212373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:211948-212020:-1:exon

position:211948:-1
position: 211948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212020:-1
position: 212020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:211121-211316:-1:exon

position:211121:-1
position: 211121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211316:-1
position: 211316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:210926-211014:-1:exon

position:210926:-1
position: 210926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211014:-1
position: 211014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:210238-210291:-1:exon

position:210238:-1
position: 210238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210291:-1
position: 210291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:209572-209653:-1:exon

position:209572:-1
position: 209572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209653:-1
position: 209653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:208217-208434:-1:exon

position:208217:-1
position: 208217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208434:-1
position: 208434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:208023-208128:-1:exon

position:208023:-1
position: 208023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208128:-1
position: 208128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:206831-206898:-1:exon

position:206831:-1
position: 206831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206898:-1
position: 206898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:206339-206536:-1:exon

position:206339:-1
position: 206339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206536:-1
position: 206536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:205828-205878:-1:exon

position:205828:-1
position: 205828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205878:-1
position: 205878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:204712-205324:-1:exon

position:205324:-1
position: 205324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: UBAP2L
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ubiquitin-associated protein 2-like
translation: MMTSVGTNRARGSWEQTQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKESGQTEPSEESKENRDRERDFSRRRGGLPRRGRGATRGREFRGQENGLDGGKSGGSSGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPASTDENYGNSNNNTWNNTGSFEPDDGTSAWRAATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENESTNLESSQTPSLAQPLVFSNSKQSALTQPASGNSFSHHSMVSMLGKGFGDVGEAKGSSTTGSQFLEQFKTAQALAQLAAQHTQPAGSTTAASWDMGSTTQTSSLVQYDLKNPTDSSVHSPFTKRQGFTSTSTMIEVFMQEKQPVVTASTTTPAPPSSPLPSKTNXSSQMSPGSSTTSPQVPRPAQQKLKQQKKKASLTSKIPALAVEMPGSSDISGLNLQFGALQFGSEPVLAEYESTPTTSAAVSQSQSSLYTSSASESSSTISSNQSQESGYQSGTIQTATFTSQNSAQGPLYEQRSTQTRRYPNSISSSPQKDLTQAKNGFSSVQPTPLQTTQAVEGATGPAVKSDSPSAPSIAPLNDGVSASSLLTTASQHSTALSSLSHSEELPSTTTAQLSSALPTQQNSLSSSTSSGRTSTSTLLHTSVESEASLHSSASTFSTSSSTVSAAPPAVSVSSSLSSVSSLGLSLSSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLSSNPYSGDLTKFGRGDASSPAPATTLAQPQQSQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYSTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSGGPINPATAAAYPPTPFMHILTPHQQPHSQILHHHLQQDGQLPYLQMILCCQRQQEDQSGSGQRSQGSSIPQKSQANKSAYNSYSWGAN
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(205229..205324,205828..205878,206339..206536,206831..206898,208023..208128,208217..208434,209572..209653,210238..210291,210926..211014,211121..211316,211948..212020,212199..212373,212824..212878,213481..213670,214390..214562,214845..215120,216318..216519,217376..217547,217991..218076,219542..219594,224554..224666,224946..224991,225698..225793,226117..226285,228702..228812,229956..230033,230598..230687))
location: region:205229-230687:-1
so has part: feature:230598-230687:-1:exon
so has part: feature:229956-230033:-1:exon
so has part: feature:228702-228812:-1:exon
so has part: feature:226117-226285:-1:exon
so has part: feature:225698-225793:-1:exon
so has part: feature:224946-224991:-1:exon
so has part: feature:224554-224666:-1:exon
so has part: feature:219542-219594:-1:exon
so has part: feature:217991-218076:-1:exon
so has part: feature:217376-217547:-1:exon
so has part: feature:216318-216519:-1:exon
so has part: feature:214845-215120:-1:exon
so has part: feature:214390-214562:-1:exon
so has part: feature:213481-213670:-1:exon
so has part: feature:212824-212878:-1:exon
so has part: feature:212199-212373:-1:exon
so has part: feature:211948-212020:-1:exon
so has part: feature:211121-211316:-1:exon
so has part: feature:210926-211014:-1:exon
so has part: feature:210238-210291:-1:exon
so has part: feature:209572-209653:-1:exon
so has part: feature:208217-208434:-1:exon
so has part: feature:208023-208128:-1:exon
so has part: feature:206831-206898:-1:exon
so has part: feature:206339-206536:-1:exon
so has part: feature:205828-205878:-1:exon
so has part: feature:205229-205324:-1:exon

XP_031949404.1
type: Protein
SIO_000068: ncbiprotein

position:205229:-1
position: 205229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230687:-1
position: 230687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230598-230687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229956-230033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228702-228812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226117-226285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:225698-225793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:224946-224991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:224554-224666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:219542-219594:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217991-218076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217376-217547:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:216318-216519:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:214845-215120:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:214390-214562:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:213481-213670:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:212824-212878:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:212199-212373:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:211948-212020:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:211121-211316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:210926-211014:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:210238-210291:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:209572-209653:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:208217-208434:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:208023-208128:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:206831-206898:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:206339-206536:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:205828-205878:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:205229-205324:-1:exon

C29H1orf43
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: C29H1orf43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 234826..238173
location: region:234826-238173:1
so has part: feature:234826-238173:1:exon
subclass of: SO_0000010

116436412
type: Gene
SIO_000068: ncbigene

position:234826:1
position: 234826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238173:1
position: 238173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234826-238173:1:exon

C29H1orf43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: C29H1orf43
product: chromosome 29 C1orf43 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093520.1
SIO_010081: C29H1orf43
subclass of: SO_0000673
so part of: C29H1orf43
location: join(234826..234978,235448..235549,235755..235867,236042..236095,236373..236538,236658..236716,237091..238173)
location: region:234826-238173:1
so has part: feature:234826-234978:1:exon
so has part: feature:235448-235549:1:exon
so has part: feature:235755-235867:1:exon
so has part: feature:236042-236095:1:exon
so has part: feature:236373-236538:1:exon
so has part: feature:236658-236716:1:exon
so has part: feature:237091-238173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234826-234978:1:exon

position:234978:1
position: 234978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:235448-235549:1:exon

position:235448:1
position: 235448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235549:1
position: 235549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235755-235867:1:exon

position:235755:1
position: 235755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235867:1
position: 235867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236042-236095:1:exon

position:236042:1
position: 236042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236095:1
position: 236095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:236373-236538:1:exon

position:236373:1
position: 236373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236538:1
position: 236538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:236658-236716:1:exon

position:236658:1
position: 236658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236716:1
position: 236716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:237091-238173:1:exon

position:237091:1
position: 237091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C29H1orf43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: C29H1orf43
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein C1orf43 homolog
translation: MAGAGSNWLSGVNVVLVMAYGSLVFVLLFIFVKRQIMRFAMKSRRGPHVPVGQHAPKDLKEEIDIRLSRVQDIKYEPQLLAEDDGAGSCSWRTPGCYNYLYRMKALDAIRTSEIPFQAEGRYPKSLIGKNFCAYLLELRNSSTSFKGIRKALIDTLLDGYESARYAPGSLGKLNI
SIO_010081: C29H1orf43
subclass of: SO_0000673
so part of: C29H1orf43
location: join(234910..234978,235448..235549,235755..235867,236042..236095,236373..236538,236658..236682)
location: region:234910-236682:1
so has part: feature:234910-234978:1:exon
so has part: feature:235448-235549:1:exon
so has part: feature:235755-235867:1:exon
so has part: feature:236042-236095:1:exon
so has part: feature:236373-236538:1:exon
so has part: feature:236658-236682:1:exon

XP_031949411.1
type: Protein
SIO_000068: ncbiprotein

position:234910:1
position: 234910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236682:1
position: 236682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234910-234978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235448-235549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235755-235867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236042-236095:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236373-236538:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236658-236682:1:exon

TPM3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 241155..261376
location: region:241155-261376:1
so has part: feature:241155-261376:1:exon
subclass of: SO_0000010

116436364
type: Gene
SIO_000068: ncbigene

position:241155:1
position: 241155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261376:1
position: 261376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241155-261376:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032093399.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241155..242514,242865..242990,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253905,255727..255790,259547..259667)
location: region:241155-259667:1
so has part: feature:241155-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:259547-259667:1:exon

position:259667:1
position: 259667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241155-242514:1:exon

position:242514:1
position: 242514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

position:242865:1
position: 242865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242990:1
position: 242990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

position:248472:1
position: 248472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248605:1
position: 248605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

position:249435:1
position: 249435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249552:1
position: 249552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

position:249798:1
position: 249798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249868:1
position: 249868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:250657-250732:1:exon

position:250657:1
position: 250657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250732:1
position: 250732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

position:251777:1
position: 251777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251839:1
position: 251839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

position:251989:1
position: 251989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252058:1
position: 252058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

position:253827:1
position: 253827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253905:1
position: 253905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:255727-255790:1:exon

position:255727:1
position: 255727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255790:1
position: 255790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:259547-259667:1:exon

position:259547:1
position: 259547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032093408.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241160..242514,242865..242990,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253909)
location: region:241160-253909:1
so has part: feature:241160-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253909:1:exon

position:241160:1
position: 241160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253909:1
position: 253909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241160-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253909:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032093407.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241162..242514,242865..242990,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253905,260218..261376)
location: region:241162-261376:1
so has part: feature:241162-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:260218-261376:1:exon

position:241162:1
position: 241162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241162-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260218-261376:1:exon

position:260218:1
position: 260218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032093409.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241314..242514,242865..242990,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,260218..261376)
location: region:241314-261376:1
so has part: feature:241314-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:260218-261376:1:exon

position:241314:1
position: 241314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241314-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260218-261376:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032093401.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241330..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,254555..255346)
location: region:241330-255346:1
so has part: feature:241330-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:254555-255346:1:exon

position:241330:1
position: 241330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255346:1
position: 255346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241330-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

position:251223:1
position: 251223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251298:1
position: 251298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:254555-255346:1:exon

position:254555:1
position: 254555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_032093398.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241333..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,255727..255790,259547..259667)
location: region:241333-259667:1
so has part: feature:241333-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:259547-259667:1:exon

position:241333:1
position: 241333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241333-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259547-259667:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032093400.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241344..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,255727..255790,258711..258835)
location: region:241344-258835:1
so has part: feature:241344-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:258711-258835:1:exon

position:241344:1
position: 241344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258835:1
position: 258835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241344-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258711-258835:1:exon

position:258711:1
position: 258711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032093411.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241351..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,258711..259245)
location: region:241351-259245:1
so has part: feature:241351-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:258711-259245:1:exon

position:241351:1
position: 241351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259245:1
position: 259245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241351-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258711-259245:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032093402.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241352..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,255727..255790,260218..261376)
location: region:241352-261376:1
so has part: feature:241352-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:260218-261376:1:exon

position:241352:1
position: 241352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241352-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:260218-261376:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032093403.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241352..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,259547..259667)
location: region:241352-259667:1
so has part: feature:241352-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:259547-259667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241352-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259547-259667:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032093405.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241361..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,254555..255346)
location: region:241361-255346:1
so has part: feature:241361-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:254555-255346:1:exon

position:241361:1
position: 241361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241361-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254555-255346:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032093404.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241366..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,260218..261376)
location: region:241366-261376:1
so has part: feature:241366-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:260218-261376:1:exon

position:241366:1
position: 241366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241366-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260218-261376:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_032093406.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(241368..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,260218..261376)
location: region:241368-261376:1
so has part: feature:241368-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:260218-261376:1:exon

position:241368:1
position: 241368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241368-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260218-261376:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X12
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELQEQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKSTKEEHLCTQRMLDQTLLDLNEM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,260218..260300)
location: region:242221-260300:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:260218-260300:1:exon

XP_031949300.1
type: Protein
SIO_000068: ncbiprotein

position:242221:1
position: 242221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260300:1
position: 260300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260218-260300:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X9
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKSTKEEHLCTQRMLDQTLLDLNEM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,260218..260300)
location: region:242221-260300:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:260218-260300:1:exon

XP_031949297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260218-260300:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X5
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIARRALRDQSSDEMGHFPWLSQIN
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,255727..255790,260218..260226)
location: region:242221-260226:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:260218-260226:1:exon

XP_031949293.1
type: Protein
SIO_000068: ncbiprotein

position:260226:1
position: 260226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:260218-260226:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X10
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELQEQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253905,260218..260221)
location: region:242221-260221:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:260218-260221:1:exon

XP_031949298.1
type: Protein
SIO_000068: ncbiprotein

position:260221:1
position: 260221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260218-260221:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X7
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,260218..260221)
location: region:242221-260221:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:260218-260221:1:exon

XP_031949295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260218-260221:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X2
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELQEQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIARRALRDQSSDEMGHFPWLSQPVCPVSQRVDVSSDMGGLTFGVKPT
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253905,255727..255790,259547..259624)
location: region:242221-259624:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:259547-259624:1:exon

XP_031949290.1
type: Protein
SIO_000068: ncbiprotein

position:259624:1
position: 259624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259547-259624:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X1
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIARRALRDQSSDEMGHFPWLSQPVCPVSQRVDVSSDMGGLTFGVKPT
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,255727..255790,259547..259624)
location: region:242221-259624:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:259547-259624:1:exon

XP_031949289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259547-259624:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X6
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSILSVQCPSVWMSPVIWVGSPLE
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,259547..259613)
location: region:242221-259613:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:259547-259613:1:exon

XP_031949294.1
type: Protein
SIO_000068: ncbiprotein

position:259613:1
position: 259613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259547-259613:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X13
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLEKNRLLSNELKLTLHDLCD
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,258711..258790)
location: region:242221-258790:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:258711-258790:1:exon

XP_031949302.1
type: Protein
SIO_000068: ncbiprotein

position:258790:1
position: 258790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:258711-258790:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X3
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIARRALRDQSSDEMGHFPWLSQSACTASLRKTACSLMS
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,255727..255790,258711..258761)
location: region:242221-258761:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:258711-258761:1:exon

XP_031949291.1
type: Protein
SIO_000068: ncbiprotein

position:258761:1
position: 258761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258711-258761:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X4
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKSCDSKLHFGFVSLLGGLFCICTRHSRSLHLTLNSSTFFQLLCTGIPGNGCCKDTEA
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,254555..254730)
location: region:242221-254730:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:254555-254730:1:exon

XP_031949292.1
type: Protein
SIO_000068: ncbiprotein

position:254730:1
position: 254730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:254555-254730:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X8
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,254555..254558)
location: region:242221-254558:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:254555-254558:1:exon

XP_031949296.1
type: Protein
SIO_000068: ncbiprotein

position:254558:1
position: 254558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:254555-254558:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X11
translation: MGPEHRLFGKVGRRVSPRKAKPLCWAELINGQWGTCNTAVLPTRGLSCIPLPTAACVPPRMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELQEQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(242221..242514,242865..242990,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253909)
location: region:242221-253909:1
so has part: feature:242221-242514:1:exon
so has part: feature:242865-242990:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253909:1:exon

XP_031949299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242221-242514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242865-242990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253827-253909:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_032093413.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245035..245245,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253905,255727..255790,259547..259667)
location: region:245035-259667:1
so has part: feature:245035-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:259547-259667:1:exon

position:245035:1
position: 245035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245035-245245:1:exon

position:245245:1
position: 245245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259547-259667:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_032093421.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245036..245245,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,258711..259245)
location: region:245036-259245:1
so has part: feature:245036-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:258711-259245:1:exon

position:245036:1
position: 245036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245036-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:258711-259245:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_032093417.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245038..245245,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253905,260218..261376)
location: region:245038-261376:1
so has part: feature:245038-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:260218-261376:1:exon

position:245038:1
position: 245038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245038-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260218-261376:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_032093419.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245038..245245,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,260218..261376)
location: region:245038-261376:1
so has part: feature:245038-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:260218-261376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245038-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260218-261376:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 20 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_032093412.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245038..245245,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,255727..255790,259547..259667)
location: region:245038-259667:1
so has part: feature:245038-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:259547-259667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245038-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259547-259667:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_032093418.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245038..245245,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253909)
location: region:245038-253909:1
so has part: feature:245038-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245038-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253909:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 23 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_032093420.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245039..245245,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,258711..259245)
location: region:245039-259245:1
so has part: feature:245039-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:258711-259245:1:exon

position:245039:1
position: 245039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245039-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:258711-259245:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_032093414.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245040..245245,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,260218..261376)
location: region:245040-261376:1
so has part: feature:245040-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:260218-261376:1:exon

position:245040:1
position: 245040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245040-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260218-261376:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 55 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_032093416.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245040..245245,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,260218..261376)
location: region:245040-261376:1
so has part: feature:245040-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:260218-261376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245040-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260218-261376:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TPM3
product: tropomyosin 3, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 26 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_032093415.1
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245040..245245,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,254555..255346)
location: region:245040-255346:1
so has part: feature:245040-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:254555-255346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:245040-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:254555-255346:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X21
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELQEQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKSTKEEHLCTQRMLDQTLLDLNEM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245114..245245,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,260218..260300)
location: region:245114-260300:1
so has part: feature:245114-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:260218-260300:1:exon

XP_031949310.1
type: Protein
SIO_000068: ncbiprotein

position:245114:1
position: 245114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245114-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260218-260300:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X18
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKSTKEEHLCTQRMLDQTLLDLNEM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245114..245245,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,260218..260300)
location: region:245114-260300:1
so has part: feature:245114-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:260218-260300:1:exon

XP_031949307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245114-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260218-260300:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X19
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELQEQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245114..245245,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253905,260218..260221)
location: region:245114-260221:1
so has part: feature:245114-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:260218-260221:1:exon

XP_031949308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245114-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260218-260221:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X16
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245114..245245,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,260218..260221)
location: region:245114-260221:1
so has part: feature:245114-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:260218-260221:1:exon

XP_031949305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245114-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260218-260221:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X15
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELQEQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIARRALRDQSSDEMGHFPWLSQPVCPVSQRVDVSSDMGGLTFGVKPT
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245114..245245,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253905,255727..255790,259547..259624)
location: region:245114-259624:1
so has part: feature:245114-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:259547-259624:1:exon

XP_031949304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245114-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259547-259624:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X14
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIARRALRDQSSDEMGHFPWLSQPVCPVSQRVDVSSDMGGLTFGVKPT
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245114..245245,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,255727..255790,259547..259624)
location: region:245114-259624:1
so has part: feature:245114-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:255727-255790:1:exon
so has part: feature:259547-259624:1:exon

XP_031949303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245114-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255727-255790:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259547-259624:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X23
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELQEQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLEKNRLLSNELKLTLHDLCD
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245114..245245,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,258711..258790)
location: region:245114-258790:1
so has part: feature:245114-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:258711-258790:1:exon

XP_031949312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245114-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:258711-258790:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X22
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLEKNRLLSNELKLTLHDLCD
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245114..245245,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,258711..258790)
location: region:245114-258790:1
so has part: feature:245114-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:258711-258790:1:exon

XP_031949311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245114-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:258711-258790:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X17
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245114..245245,248472..248605,249435..249552,249798..249868,251223..251298,251777..251839,251989..252058,253827..253905,254555..254558)
location: region:245114-254558:1
so has part: feature:245114-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:251223-251298:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253905:1:exon
so has part: feature:254555-254558:1:exon

XP_031949306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245114-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251223-251298:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:254555-254558:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X20
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELQEQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(245114..245245,248472..248605,249435..249552,249798..249868,250657..250732,251777..251839,251989..252058,253827..253909)
location: region:245114-253909:1
so has part: feature:245114-245245:1:exon
so has part: feature:248472-248605:1:exon
so has part: feature:249435-249552:1:exon
so has part: feature:249798-249868:1:exon
so has part: feature:250657-250732:1:exon
so has part: feature:251777-251839:1:exon
so has part: feature:251989-252058:1:exon
so has part: feature:253827-253909:1:exon

XP_031949309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245114-245245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248472-248605:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249435-249552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249798-249868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250657-250732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251777-251839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251989-252058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253827-253909:1:exon

TMEM79
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(284044..287147)
location: region:284044-287147:-1
so has part: feature:284044-287147:-1:exon
subclass of: SO_0000010

116436524
type: Gene
SIO_000068: ncbigene

position:284044:-1
position: 284044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287147:-1
position: 287147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284044-287147:-1:exon

TMEM79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TMEM79
product: transmembrane protein 79, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_032093700.1
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(284044..284531,284773..284986,285177..285997,286826..287145))
location: region:284044-287145:-1
so has part: feature:286826-287145:-1:exon
so has part: feature:285177-285997:-1:exon
so has part: feature:284773-284986:-1:exon
so has part: feature:284044-284531:-1:exon

position:287145:-1
position: 287145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286826-287145:-1:exon

position:286826:-1
position: 286826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:285177-285997:-1:exon

position:285177:-1
position: 285177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285997:-1
position: 285997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284773-284986:-1:exon

position:284773:-1
position: 284773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284986:-1
position: 284986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284044-284531:-1:exon

position:284531:-1
position: 284531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 79 isoform X1
translation: MGTARGLPVSPPPALPGPGWDGRRVRPTGRGSAPAPLPVPPELVRQVRGAEAAGRVPESRRVPAELSRGPHGPAPLPEVKAGTGNRTGTSSPLNTTSAPSCIPGTAELDALMAAADPVLPSEEVVLLELGKVALETVPPAPDEHLGDPDATLPWDRCQQNTQGQPELVEMKRRSSPEGGHEDPEEAVPTCPTVEAEDEEVPQLPVMAAHVFVPIDPQCIEQSPFKQKQHPTPWAQEEGRGDHVPPSDRPSSLHHKQVFLPLGPSRYRGPVGFEGRMVKPPAEQSRCPCARECGTDNLKAMASVAGTLLLCPCLIYGAYIFLPFDAPLLPTVSARLVYTLRCAAFATFPVVLGMIVSGISRLCSSALEPFGELHQEVEIHRTYVSQSIHLFILYFFNMAVLATYLPQELLKLIPLLTGLFAISRLIFWMSYAIGRSFRAFGFSMTFLPLLAMLLWNLYGMFVLEPENLLSVAAAKPEGHSKESQAKLRHWG
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(284327..284531,284773..284986,285177..285997,286826..287058))
location: region:284327-287058:-1
so has part: feature:286826-287058:-1:exon
so has part: feature:285177-285997:-1:exon
so has part: feature:284773-284986:-1:exon
so has part: feature:284327-284531:-1:exon

XP_031949591.1
type: Protein
SIO_000068: ncbiprotein

position:284327:-1
position: 284327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287058:-1
position: 287058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286826-287058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285177-285997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284773-284986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284327-284531:-1:exon

TMEM79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TMEM79
product: transmembrane protein 79, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_032093701.1
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(284438..284626,284773..284986,285177..285997,286826..287147))
location: region:284438-287147:-1
so has part: feature:286826-287147:-1:exon
so has part: feature:285177-285997:-1:exon
so has part: feature:284773-284986:-1:exon
so has part: feature:284438-284626:-1:exon

position:284438:-1
position: 284438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286826-287147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285177-285997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284773-284986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284438-284626:-1:exon

position:284626:-1
position: 284626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 79 isoform X2
translation: MGTARGLPVSPPPALPGPGWDGRRVRPTGRGSAPAPLPVPPELVRQVRGAEAAGRVPESRRVPAELSRGPHGPAPLPEVKAGTGNRTGTSSPLNTTSAPSCIPGTAELDALMAAADPVLPSEEVVLLELGKVALETVPPAPDEHLGDPDATLPWDRCQQNTQGQPELVEMKRRSSPEGGHEDPEEAVPTCPTVEAEDEEVPQLPVMAAHVFVPIDPQCIEQSPFKQKQHPTPWAQEEGRGDHVPPSDRPSSLHHKQVFLPLGPSRYRGPVGFEGRMVKPPAEQSRCPCARECGTDNLKAMASVAGTLLLCPCLIYGAYIFLPFDAPLLPTVSARLVYTLRCAAFATFPVVLGMIVSGISRLCSSALEPFGELHQEVEIHRTYVSQSIHLFILYFFNMAVLATYLPQELLKLIPLLTGLFAISRSHVRETLTGQNH
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(284587..284626,284773..284986,285177..285997,286826..287058))
location: region:284587-287058:-1
so has part: feature:286826-287058:-1:exon
so has part: feature:285177-285997:-1:exon
so has part: feature:284773-284986:-1:exon
so has part: feature:284587-284626:-1:exon

XP_031949592.1
type: Protein
SIO_000068: ncbiprotein

position:284587:-1
position: 284587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286826-287058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285177-285997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284773-284986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284587-284626:-1:exon

SMG5
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SMG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 288597..319574
location: region:288597-319574:1
so has part: feature:288597-319574:1:exon
subclass of: SO_0000010

116436436
type: Gene
SIO_000068: ncbigene

position:288597:1
position: 288597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319574:1
position: 319574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288597-319574:1:exon

SMG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SMG5
product: SMG5 nonsense mediated mRNA decay factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 133 samples with support for all annotated introns
transcript id: XM_032093562.1
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: join(288597..288701,294786..294884,295495..295618,296251..296407,299340..299429,300731..300820,301700..301778,302356..302481,302933..303001,304873..305081,305232..305369,306454..307155,310100..310269,310538..310613,311412..311587,311948..312106,312332..312391,313147..313306,313687..313777,314366..314440,314732..314870,315255..319574)
location: region:288597-319574:1
so has part: feature:288597-288701:1:exon
so has part: feature:294786-294884:1:exon
so has part: feature:295495-295618:1:exon
so has part: feature:296251-296407:1:exon
so has part: feature:299340-299429:1:exon
so has part: feature:300731-300820:1:exon
so has part: feature:301700-301778:1:exon
so has part: feature:302356-302481:1:exon
so has part: feature:302933-303001:1:exon
so has part: feature:304873-305081:1:exon
so has part: feature:305232-305369:1:exon
so has part: feature:306454-307155:1:exon
so has part: feature:310100-310269:1:exon
so has part: feature:310538-310613:1:exon
so has part: feature:311412-311587:1:exon
so has part: feature:311948-312106:1:exon
so has part: feature:312332-312391:1:exon
so has part: feature:313147-313306:1:exon
so has part: feature:313687-313777:1:exon
so has part: feature:314366-314440:1:exon
so has part: feature:314732-314870:1:exon
so has part: feature:315255-319574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288597-288701:1:exon

position:288701:1
position: 288701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294786-294884:1:exon

position:294786:1
position: 294786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294884:1
position: 294884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295495-295618:1:exon

position:295495:1
position: 295495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295618:1
position: 295618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296251-296407:1:exon

position:296251:1
position: 296251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296407:1
position: 296407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:299340-299429:1:exon

position:299340:1
position: 299340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299429:1
position: 299429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:300731-300820:1:exon

position:300731:1
position: 300731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300820:1
position: 300820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:301700-301778:1:exon

position:301700:1
position: 301700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301778:1
position: 301778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:302356-302481:1:exon

position:302356:1
position: 302356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302481:1
position: 302481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:302933-303001:1:exon

position:302933:1
position: 302933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303001:1
position: 303001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:304873-305081:1:exon

position:304873:1
position: 304873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305081:1
position: 305081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:305232-305369:1:exon

position:305232:1
position: 305232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305369:1
position: 305369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:306454-307155:1:exon

position:306454:1
position: 306454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307155:1
position: 307155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:310100-310269:1:exon

position:310100:1
position: 310100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310269:1
position: 310269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:310538-310613:1:exon

position:310538:1
position: 310538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310613:1
position: 310613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:311412-311587:1:exon

position:311412:1
position: 311412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311587:1
position: 311587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:311948-312106:1:exon

position:311948:1
position: 311948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312106:1
position: 312106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:312332-312391:1:exon

position:312332:1
position: 312332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312391:1
position: 312391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:313147-313306:1:exon

position:313147:1
position: 313147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313306:1
position: 313306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:313687-313777:1:exon

position:313687:1
position: 313687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313777:1
position: 313777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:314366-314440:1:exon

position:314366:1
position: 314366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314440:1
position: 314440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:314732-314870:1:exon

position:314732:1
position: 314732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314870:1
position: 314870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:315255-319574:1:exon

position:315255:1
position: 315255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SMG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG5
translation: MSQGGGAAGESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQDVFKPENISLRNKLRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCESRKLSPSKKRGKDIKRLLVSFMYLQSLLQPKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNPSSTSEDEEEYESGYSFLPDLLIFRMVIICLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTDDQEPREPVNSVEKEAEAELANHQPSEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDSSQGSIKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEEGSSQGKSGPKEALKNCVDGSGLGDSKSPSISKIEAVDPAVNGPASLSTNDASIASNLQAMSTQLFQTKRCFRLAPTFSNILLKPNSEPPALKDGIESKPCVNGDLEKPSLAEQDDVSDSEESISSNRSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPSAADLQESGLALCDEVKDILSDAELPDLKANLLLPEDVALRNLPPLKNAHKRFNFEQDRPIFSAVEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQAQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLALVKQLASSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGSGEDDTTGMVTIITGFQLEDSSMFSVPMQSAIQAAANASIEIKNVLEFYKQWKEMG
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: join(288625..288701,294786..294884,295495..295618,296251..296407,299340..299429,300731..300820,301700..301778,302356..302481,302933..303001,304873..305081,305232..305369,306454..307155,310100..310269,310538..310613,311412..311587,311948..312106,312332..312391,313147..313306,313687..313777,314366..314440,314732..314870,315255..315338)
location: region:288625-315338:1
so has part: feature:288625-288701:1:exon
so has part: feature:294786-294884:1:exon
so has part: feature:295495-295618:1:exon
so has part: feature:296251-296407:1:exon
so has part: feature:299340-299429:1:exon
so has part: feature:300731-300820:1:exon
so has part: feature:301700-301778:1:exon
so has part: feature:302356-302481:1:exon
so has part: feature:302933-303001:1:exon
so has part: feature:304873-305081:1:exon
so has part: feature:305232-305369:1:exon
so has part: feature:306454-307155:1:exon
so has part: feature:310100-310269:1:exon
so has part: feature:310538-310613:1:exon
so has part: feature:311412-311587:1:exon
so has part: feature:311948-312106:1:exon
so has part: feature:312332-312391:1:exon
so has part: feature:313147-313306:1:exon
so has part: feature:313687-313777:1:exon
so has part: feature:314366-314440:1:exon
so has part: feature:314732-314870:1:exon
so has part: feature:315255-315338:1:exon

XP_031949453.1
type: Protein
SIO_000068: ncbiprotein

position:288625:1
position: 288625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315338:1
position: 315338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288625-288701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294786-294884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295495-295618:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296251-296407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299340-299429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300731-300820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:301700-301778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302356-302481:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:302933-303001:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304873-305081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305232-305369:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306454-307155:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:310100-310269:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:310538-310613:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:311412-311587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:311948-312106:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:312332-312391:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:313147-313306:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:313687-313777:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:314366-314440:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:314732-314870:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:315255-315338:1:exon

BGLAP
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: BGLAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(324927..326376)
location: region:324927-326376:-1
so has part: feature:324927-326376:-1:exon
subclass of: SO_0000010

116436512
type: Gene
SIO_000068: ncbigene

position:324927:-1
position: 324927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326376:-1
position: 326376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324927-326376:-1:exon

BGLAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: BGLAP
product: bone gamma-carboxyglutamate protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032093682.1
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: complement(join(324927..325173,325311..325377,325460..325504,325770..326376))
location: region:324927-326376:-1
so has part: feature:325770-326376:-1:exon
so has part: feature:325460-325504:-1:exon
so has part: feature:325311-325377:-1:exon
so has part: feature:324927-325173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325770-326376:-1:exon

position:325770:-1
position: 325770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325460-325504:-1:exon

position:325460:-1
position: 325460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325504:-1
position: 325504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:325311-325377:-1:exon

position:325311:-1
position: 325311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325377:-1
position: 325377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:324927-325173:-1:exon

position:325173:-1
position: 325173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BGLAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: BGLAP
product: bone gamma-carboxyglutamate protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032093681.1
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: complement(join(324927..325176,325311..325377,325460..325504,325770..326376))
location: region:324927-326376:-1
so has part: feature:325770-326376:-1:exon
so has part: feature:325460-325504:-1:exon
so has part: feature:325311-325377:-1:exon
so has part: feature:324927-325176:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325770-326376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325460-325504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325311-325377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324927-325176:-1:exon

position:325176:-1
position: 325176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BGLAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: BGLAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteocalcin isoform X2
translation: MADVLEITLVGPCTPLAKATAPYKDTQGAGAVLSPAQEGTMKSLVLLTLLALLTLGLCRRAADGSTSTKDSPSSEAFVSRRASAEVVQRQKRNYGYDSTYGAPPDPLEAKREVCELNPDCDELADQIGFQEAYRRYYGLV
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: complement(join(325044..325173,325311..325377,325460..325504,325770..325950))
location: region:325044-325950:-1
so has part: feature:325770-325950:-1:exon
so has part: feature:325460-325504:-1:exon
so has part: feature:325311-325377:-1:exon
so has part: feature:325044-325173:-1:exon

XP_031949573.1
type: Protein
SIO_000068: ncbiprotein

position:325044:-1
position: 325044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325950:-1
position: 325950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325770-325950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325460-325504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325311-325377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325044-325173:-1:exon

BGLAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: BGLAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteocalcin isoform X1
translation: MADVLEITLVGPCTPLAKATAPYKDTQGAGAVLSPAQEGTMKSLVLLTLLALLTLGLCRRAADGSTSTKDSPSSEAFVSRRASAEVVQRQKRNYGYDSSTYGAPPDPLEAKREVCELNPDCDELADQIGFQEAYRRYYGLV
SIO_010081: BGLAP
subclass of: SO_0000673
so part of: BGLAP
location: complement(join(325044..325176,325311..325377,325460..325504,325770..325950))
location: region:325044-325950:-1
so has part: feature:325770-325950:-1:exon
so has part: feature:325460-325504:-1:exon
so has part: feature:325311-325377:-1:exon
so has part: feature:325044-325176:-1:exon

XP_031949572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325770-325950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325460-325504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325311-325377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325044-325176:-1:exon

PMF1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(326610..330939)
location: region:326610-330939:-1
so has part: feature:326610-330939:-1:exon
subclass of: SO_0000010

116436345
type: Gene
SIO_000068: ncbigene

position:326610:-1
position: 326610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330939:-1
position: 330939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326610-330939:-1:exon

PMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PMF1
product: polyamine modulated factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 136 samples with support for all annotated introns
transcript id: XM_032093378.1
SIO_010081: PMF1
subclass of: SO_0000673
so part of: PMF1
location: complement(join(326610..327749,328098..328293,329685..329785,330497..330602,330785..330939))
location: region:326610-330939:-1
so has part: feature:330785-330939:-1:exon
so has part: feature:330497-330602:-1:exon
so has part: feature:329685-329785:-1:exon
so has part: feature:328098-328293:-1:exon
so has part: feature:326610-327749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330785-330939:-1:exon

position:330785:-1
position: 330785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:330497-330602:-1:exon

position:330497:-1
position: 330497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330602:-1
position: 330602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:329685-329785:-1:exon

position:329685:-1
position: 329685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329785:-1
position: 329785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:328098-328293:-1:exon

position:328098:-1
position: 328098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328293:-1
position: 328293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326610-327749:-1:exon

position:327749:-1
position: 327749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1
translation: MAAAGGDGGAAVAGDSGADGGGGPALSAAPGRAQVFTTVVDTFLEKLVAAGSYQRFVNCYRCFYKLQPQLTRSIYDQFISQLQASIKEEIQEVKNEGNLEGLFSSLDKVVEEAKDREEPAWRPSGIPEDDVRSAMVPYFLKHRSYLRRVLREKEEENRKVAESVLMGRDRIAELQQLIQARQQAWQAISKEQRELVMTFQEPQ
SIO_010081: PMF1
subclass of: SO_0000673
so part of: PMF1
location: complement(join(327696..327749,328098..328293,329685..329785,330497..330602,330785..330939))
location: region:327696-330939:-1
so has part: feature:330785-330939:-1:exon
so has part: feature:330497-330602:-1:exon
so has part: feature:329685-329785:-1:exon
so has part: feature:328098-328293:-1:exon
so has part: feature:327696-327749:-1:exon

XP_031949269.1
type: Protein
SIO_000068: ncbiprotein

position:327696:-1
position: 327696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330785-330939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330497-330602:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329685-329785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328098-328293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:327696-327749:-1:exon

SLC25A44
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(331623..341257)
location: region:331623-341257:-1
so has part: feature:331623-341257:-1:exon
subclass of: SO_0000010

116436476
type: Gene
SIO_000068: ncbigene

position:331623:-1
position: 331623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341257:-1
position: 341257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331623-341257:-1:exon

SLC25A44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SLC25A44
product: solute carrier family 25 member 44, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093617.1
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(331623..333787,334196..334323,336233..336960,337304..337415,341151..341257))
location: region:331623-341257:-1
so has part: feature:341151-341257:-1:exon
so has part: feature:337304-337415:-1:exon
so has part: feature:336233-336960:-1:exon
so has part: feature:334196-334323:-1:exon
so has part: feature:331623-333787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341151-341257:-1:exon

position:341151:-1
position: 341151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:337304-337415:-1:exon

position:337304:-1
position: 337304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337415:-1
position: 337415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:336233-336960:-1:exon

position:336233:-1
position: 336233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336960:-1
position: 336960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:334196-334323:-1:exon

position:334196:-1
position: 334196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334323:-1
position: 334323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:331623-333787:-1:exon

position:333787:-1
position: 333787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SLC25A44
product: solute carrier family 25 member 44, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032093618.1
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(331623..333787,334196..334323,336233..336960,337304..337415,338031..338224,341151..341242))
location: region:331623-341242:-1
so has part: feature:341151-341242:-1:exon
so has part: feature:338031-338224:-1:exon
so has part: feature:337304-337415:-1:exon
so has part: feature:336233-336960:-1:exon
so has part: feature:334196-334323:-1:exon
so has part: feature:331623-333787:-1:exon

position:341242:-1
position: 341242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341151-341242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338031-338224:-1:exon

position:338031:-1
position: 338031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338224:-1
position: 338224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337304-337415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336233-336960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334196-334323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331623-333787:-1:exon

SLC25A44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44
translation: MEDKRNIPIIEWEHLDKRKFYVLGICMTMMIRVSVYPFTLIRTRLQVQKGKSLYNGTFDAFVKILRTEGTAGLYRGFLVNTFTLISGQCYVTTYELTRKYVSRYNNNNAVKSLVAGGSASLVAQSITVPIDVISQHLMMQRKGESMGRFKVQNQDGKRLLVFGQTKDIIVQIFKADGFRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSSLTPKDCPHLLLQAISGPLAAATASTLTNPMDVVRARVQVEGKSSIILTFKQLIAEEGPWGLTKGLSARIISATPSTIVIVVGYETLKKLSLRPELVDSRHW
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(333596..333787,334196..334323,336233..336854))
location: region:333596-336854:-1
so has part: feature:336233-336854:-1:exon
so has part: feature:334196-334323:-1:exon
so has part: feature:333596-333787:-1:exon

XP_031949508.1
type: Protein
SIO_000068: ncbiprotein

position:333596:-1
position: 333596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336854:-1
position: 336854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336233-336854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334196-334323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333596-333787:-1:exon

SLC25A44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44
translation: MEDKRNIPIIEWEHLDKRKFYVLGICMTMMIRVSVYPFTLIRTRLQVQKGKSLYNGTFDAFVKILRTEGTAGLYRGFLVNTFTLISGQCYVTTYELTRKYVSRYNNNNAVKSLVAGGSASLVAQSITVPIDVISQHLMMQRKGESMGRFKVQNQDGKRLLVFGQTKDIIVQIFKADGFRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSSLTPKDCPHLLLQAISGPLAAATASTLTNPMDVVRARVQVEGKSSIILTFKQLIAEEGPWGLTKGLSARIISATPSTIVIVVGYETLKKLSLRPELVDSRHW
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(333596..333787,334196..334323,336233..336854))
location: region:333596-336854:-1
so has part: feature:336233-336854:-1:exon
so has part: feature:334196-334323:-1:exon
so has part: feature:333596-333787:-1:exon

XP_031949509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336233-336854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334196-334323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333596-333787:-1:exon

SEMA4A
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(341716..352897)
location: region:341716-352897:-1
so has part: feature:341716-352897:-1:exon
subclass of: SO_0000010

116436504
type: Gene
SIO_000068: ncbigene

position:341716:-1
position: 341716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352897:-1
position: 352897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341716-352897:-1:exon

SEMA4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SEMA4A
product: semaphorin 4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032093672.1
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(341716..342944,343035..343147,343221..343384,343472..343587,343676..343865,344105..344255,344331..344500,344732..344862,344966..345082,345196..345304,345808..345906,345988..346050,346163..346323,347284..347421,352880..352897))
location: region:341716-352897:-1
so has part: feature:352880-352897:-1:exon
so has part: feature:347284-347421:-1:exon
so has part: feature:346163-346323:-1:exon
so has part: feature:345988-346050:-1:exon
so has part: feature:345808-345906:-1:exon
so has part: feature:345196-345304:-1:exon
so has part: feature:344966-345082:-1:exon
so has part: feature:344732-344862:-1:exon
so has part: feature:344331-344500:-1:exon
so has part: feature:344105-344255:-1:exon
so has part: feature:343676-343865:-1:exon
so has part: feature:343472-343587:-1:exon
so has part: feature:343221-343384:-1:exon
so has part: feature:343035-343147:-1:exon
so has part: feature:341716-342944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352880-352897:-1:exon

position:352880:-1
position: 352880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347284-347421:-1:exon

position:347284:-1
position: 347284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347421:-1
position: 347421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346163-346323:-1:exon

position:346163:-1
position: 346163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346323:-1
position: 346323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:345988-346050:-1:exon

position:345988:-1
position: 345988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346050:-1
position: 346050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:345808-345906:-1:exon

position:345808:-1
position: 345808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345906:-1
position: 345906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:345196-345304:-1:exon

position:345196:-1
position: 345196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345304:-1
position: 345304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:344966-345082:-1:exon

position:344966:-1
position: 344966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345082:-1
position: 345082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:344732-344862:-1:exon

position:344732:-1
position: 344732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344862:-1
position: 344862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:344331-344500:-1:exon

position:344331:-1
position: 344331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344500:-1
position: 344500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:344105-344255:-1:exon

position:344105:-1
position: 344105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344255:-1
position: 344255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:343676-343865:-1:exon

position:343676:-1
position: 343676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343865:-1
position: 343865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:343472-343587:-1:exon

position:343472:-1
position: 343472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343587:-1
position: 343587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:343221-343384:-1:exon

position:343221:-1
position: 343221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343384:-1
position: 343384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:343035-343147:-1:exon

position:343035:-1
position: 343035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343147:-1
position: 343147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:341716-342944:-1:exon

position:342944:-1
position: 342944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEMA4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SEMA4A
product: semaphorin 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_032093670.1
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(341716..342944,343035..343147,343221..343384,343472..343587,343676..343865,344105..344255,344331..344500,344732..344862,344966..345082,345196..345304,345808..345906,345988..346050,346163..346323,347284..347421,347929..348713))
location: region:341716-348713:-1
so has part: feature:347929-348713:-1:exon
so has part: feature:347284-347421:-1:exon
so has part: feature:346163-346323:-1:exon
so has part: feature:345988-346050:-1:exon
so has part: feature:345808-345906:-1:exon
so has part: feature:345196-345304:-1:exon
so has part: feature:344966-345082:-1:exon
so has part: feature:344732-344862:-1:exon
so has part: feature:344331-344500:-1:exon
so has part: feature:344105-344255:-1:exon
so has part: feature:343676-343865:-1:exon
so has part: feature:343472-343587:-1:exon
so has part: feature:343221-343384:-1:exon
so has part: feature:343035-343147:-1:exon
so has part: feature:341716-342944:-1:exon

position:348713:-1
position: 348713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347929-348713:-1:exon

position:347929:-1
position: 347929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347284-347421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346163-346323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345988-346050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345808-345906:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345196-345304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344966-345082:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344732-344862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:344331-344500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344105-344255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343676-343865:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343472-343587:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343221-343384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343035-343147:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341716-342944:-1:exon

SEMA4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SEMA4A
product: semaphorin 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032093671.1
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(341716..342944,343035..343147,343221..343384,343472..343587,343676..343865,344105..344255,344331..344500,344732..344862,344966..345082,345196..345304,345808..345906,345988..346050,346163..346323,347284..347421,347960..347977))
location: region:341716-347977:-1
so has part: feature:347960-347977:-1:exon
so has part: feature:347284-347421:-1:exon
so has part: feature:346163-346323:-1:exon
so has part: feature:345988-346050:-1:exon
so has part: feature:345808-345906:-1:exon
so has part: feature:345196-345304:-1:exon
so has part: feature:344966-345082:-1:exon
so has part: feature:344732-344862:-1:exon
so has part: feature:344331-344500:-1:exon
so has part: feature:344105-344255:-1:exon
so has part: feature:343676-343865:-1:exon
so has part: feature:343472-343587:-1:exon
so has part: feature:343221-343384:-1:exon
so has part: feature:343035-343147:-1:exon
so has part: feature:341716-342944:-1:exon

position:347977:-1
position: 347977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347960-347977:-1:exon

position:347960:-1
position: 347960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347284-347421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346163-346323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345988-346050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345808-345906:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345196-345304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344966-345082:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344732-344862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:344331-344500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344105-344255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343676-343865:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343472-343587:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343221-343384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343035-343147:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:341716-342944:-1:exon

SEMA4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X1
translation: MGLFVGSNAQPWGLVFWAMLVPMGLVSGLMLRPAVGPHNPQKKCRCFPHPKDFPSKQTQASEHTFLPHVTPWAPSRRSRAPWFPSQLPPPGFAAVPAGVRGRGGGRRHPLPQPAEARPLPAGLSGSRSPGGATQGWAGPGCSEPSRSRAGSTATLQPGAGHGPTGGSWPQPPGPRRLPGARAPGLEVSGSVLARQRGMVVGPSWGASLPPPAMPAALRLLCGVVVPAAVLCAEPLPRVTFPSGDPRRTLTHFSQDNVSHYDVFLLDESKEELYVGARDRVLALAVGTPGSIRAKASITWGPTAEKTSECAFKKKSQETECFNFIRVLVALNQTHLYVCGTYAFSPACTYIHLENFTLMSSGRGQPFLDGKGQCPFDPQHTYTALLVDGELYAGTMNNFQGNEPIISRSLGTRTLLKTDAFLRWLSADAAFVASFSIPGDDKVYFFFEETADEFDFFERLLVPRVARVCKSDVGGDKVLQKKWTTFLKAQLVCSQAGRFPFNVIHHAFALPRHDGRADFYAVFTSQWQAGRAGSAAVCAYSQEDLEKVFEGKYKELNKESSRWTVYSGADMTPRPGSCAMGPSSDKALSFMKEHFLMDGKVSPIQGRPLLVKSDVTYTRITVDETRGISGVTYRVMFLATAEGFLHKAVELPKGPHIVESIQLFAMPEPVKNLLLAPGKGILYVGYSRGVLQVPLANCSLHQSCAECVLARDPYCAWHSSEGSCQPARLATEDTSAWLQDVETGSSVTTCHHRRSAGMPRAWGAPEDPTVQELSPQLNTVVHLPCPRNSALATYSWQQPSSGQGNMVLLPDHTLVVIMQEDTAGTYKCQATENGYTWTVAHYQLRAPDEAASGDGLDEEELAGGPSGPGTPRSYWPQFVAVTVLLAGTLTVAACLALLAYRDQLKARSKVRGCSTAHSPPSRHREKVPLNGGSAEPPAPGAATEEEEEDEGSQACCLQLDGDIDVDNNRLHVPAGDTA
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(342322..342944,343035..343147,343221..343384,343472..343587,343676..343865,344105..344255,344331..344500,344732..344862,344966..345082,345196..345304,345808..345906,345988..346050,346163..346323,347284..347421,347929..348517))
location: region:342322-348517:-1
so has part: feature:347929-348517:-1:exon
so has part: feature:347284-347421:-1:exon
so has part: feature:346163-346323:-1:exon
so has part: feature:345988-346050:-1:exon
so has part: feature:345808-345906:-1:exon
so has part: feature:345196-345304:-1:exon
so has part: feature:344966-345082:-1:exon
so has part: feature:344732-344862:-1:exon
so has part: feature:344331-344500:-1:exon
so has part: feature:344105-344255:-1:exon
so has part: feature:343676-343865:-1:exon
so has part: feature:343472-343587:-1:exon
so has part: feature:343221-343384:-1:exon
so has part: feature:343035-343147:-1:exon
so has part: feature:342322-342944:-1:exon

XP_031949561.1
type: Protein
SIO_000068: ncbiprotein

position:342322:-1
position: 342322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348517:-1
position: 348517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347929-348517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347284-347421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346163-346323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345988-346050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345808-345906:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345196-345304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344966-345082:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344732-344862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:344331-344500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344105-344255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343676-343865:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343472-343587:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343221-343384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:343035-343147:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342322-342944:-1:exon

SEMA4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X2
translation: MVVGPSWGASLPPPAMPAALRLLCGVVVPAAVLCAEPLPRVTFPSGDPRRTLTHFSQDNVSHYDVFLLDESKEELYVGARDRVLALAVGTPGSIRAKASITWGPTAEKTSECAFKKKSQETECFNFIRVLVALNQTHLYVCGTYAFSPACTYIHLENFTLMSSGRGQPFLDGKGQCPFDPQHTYTALLVDGELYAGTMNNFQGNEPIISRSLGTRTLLKTDAFLRWLSADAAFVASFSIPGDDKVYFFFEETADEFDFFERLLVPRVARVCKSDVGGDKVLQKKWTTFLKAQLVCSQAGRFPFNVIHHAFALPRHDGRADFYAVFTSQWQAGRAGSAAVCAYSQEDLEKVFEGKYKELNKESSRWTVYSGADMTPRPGSCAMGPSSDKALSFMKEHFLMDGKVSPIQGRPLLVKSDVTYTRITVDETRGISGVTYRVMFLATAEGFLHKAVELPKGPHIVESIQLFAMPEPVKNLLLAPGKGILYVGYSRGVLQVPLANCSLHQSCAECVLARDPYCAWHSSEGSCQPARLATEDTSAWLQDVETGSSVTTCHHRRSAGMPRAWGAPEDPTVQELSPQLNTVVHLPCPRNSALATYSWQQPSSGQGNMVLLPDHTLVVIMQEDTAGTYKCQATENGYTWTVAHYQLRAPDEAASGDGLDEEELAGGPSGPGTPRSYWPQFVAVTVLLAGTLTVAACLALLAYRDQLKARSKVRGCSTAHSPPSRHREKVPLNGGSAEPPAPGAATEEEEEDEGSQACCLQLDGDIDVDNNRLHVPAGDTA
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(342322..342944,343035..343147,343221..343384,343472..343587,343676..343865,344105..344255,344331..344500,344732..344862,344966..345082,345196..345304,345808..345906,345988..346050,346163..346323,347284..347419))
location: region:342322-347419:-1
so has part: feature:347284-347419:-1:exon
so has part: feature:346163-346323:-1:exon
so has part: feature:345988-346050:-1:exon
so has part: feature:345808-345906:-1:exon
so has part: feature:345196-345304:-1:exon
so has part: feature:344966-345082:-1:exon
so has part: feature:344732-344862:-1:exon
so has part: feature:344331-344500:-1:exon
so has part: feature:344105-344255:-1:exon
so has part: feature:343676-343865:-1:exon
so has part: feature:343472-343587:-1:exon
so has part: feature:343221-343384:-1:exon
so has part: feature:343035-343147:-1:exon
so has part: feature:342322-342944:-1:exon

XP_031949562.1
type: Protein
SIO_000068: ncbiprotein

position:347419:-1
position: 347419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347284-347419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346163-346323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:345988-346050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345808-345906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345196-345304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344966-345082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344732-344862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344331-344500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:344105-344255:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343676-343865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343472-343587:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343221-343384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343035-343147:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:342322-342944:-1:exon

SEMA4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X2
translation: MVVGPSWGASLPPPAMPAALRLLCGVVVPAAVLCAEPLPRVTFPSGDPRRTLTHFSQDNVSHYDVFLLDESKEELYVGARDRVLALAVGTPGSIRAKASITWGPTAEKTSECAFKKKSQETECFNFIRVLVALNQTHLYVCGTYAFSPACTYIHLENFTLMSSGRGQPFLDGKGQCPFDPQHTYTALLVDGELYAGTMNNFQGNEPIISRSLGTRTLLKTDAFLRWLSADAAFVASFSIPGDDKVYFFFEETADEFDFFERLLVPRVARVCKSDVGGDKVLQKKWTTFLKAQLVCSQAGRFPFNVIHHAFALPRHDGRADFYAVFTSQWQAGRAGSAAVCAYSQEDLEKVFEGKYKELNKESSRWTVYSGADMTPRPGSCAMGPSSDKALSFMKEHFLMDGKVSPIQGRPLLVKSDVTYTRITVDETRGISGVTYRVMFLATAEGFLHKAVELPKGPHIVESIQLFAMPEPVKNLLLAPGKGILYVGYSRGVLQVPLANCSLHQSCAECVLARDPYCAWHSSEGSCQPARLATEDTSAWLQDVETGSSVTTCHHRRSAGMPRAWGAPEDPTVQELSPQLNTVVHLPCPRNSALATYSWQQPSSGQGNMVLLPDHTLVVIMQEDTAGTYKCQATENGYTWTVAHYQLRAPDEAASGDGLDEEELAGGPSGPGTPRSYWPQFVAVTVLLAGTLTVAACLALLAYRDQLKARSKVRGCSTAHSPPSRHREKVPLNGGSAEPPAPGAATEEEEEDEGSQACCLQLDGDIDVDNNRLHVPAGDTA
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(342322..342944,343035..343147,343221..343384,343472..343587,343676..343865,344105..344255,344331..344500,344732..344862,344966..345082,345196..345304,345808..345906,345988..346050,346163..346323,347284..347419))
location: region:342322-347419:-1
so has part: feature:347284-347419:-1:exon
so has part: feature:346163-346323:-1:exon
so has part: feature:345988-346050:-1:exon
so has part: feature:345808-345906:-1:exon
so has part: feature:345196-345304:-1:exon
so has part: feature:344966-345082:-1:exon
so has part: feature:344732-344862:-1:exon
so has part: feature:344331-344500:-1:exon
so has part: feature:344105-344255:-1:exon
so has part: feature:343676-343865:-1:exon
so has part: feature:343472-343587:-1:exon
so has part: feature:343221-343384:-1:exon
so has part: feature:343035-343147:-1:exon
so has part: feature:342322-342944:-1:exon

XP_031949563.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347284-347419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346163-346323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:345988-346050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:345808-345906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345196-345304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344966-345082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344732-344862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344331-344500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:344105-344255:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343676-343865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:343472-343587:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343221-343384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343035-343147:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:342322-342944:-1:exon

LMNA
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LMNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354673..375883)
location: region:354673-375883:-1
so has part: feature:354673-375883:-1:exon
subclass of: SO_0000010

116436457
type: Gene
SIO_000068: ncbigene

position:354673:-1
position: 354673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375883:-1
position: 375883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354673-375883:-1:exon

LMNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LMNA
product: lamin A/C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 136 samples with support for all annotated introns
transcript id: XM_032093593.1
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(join(354673..354814,355431..355685,357489..357584,357666..357785,357949..358056,358190..358394,358485..358705,358810..358935,359034..359204,359313..359438,359624..359780,375428..375883))
location: region:354673-375883:-1
so has part: feature:375428-375883:-1:exon
so has part: feature:359624-359780:-1:exon
so has part: feature:359313-359438:-1:exon
so has part: feature:359034-359204:-1:exon
so has part: feature:358810-358935:-1:exon
so has part: feature:358485-358705:-1:exon
so has part: feature:358190-358394:-1:exon
so has part: feature:357949-358056:-1:exon
so has part: feature:357666-357785:-1:exon
so has part: feature:357489-357584:-1:exon
so has part: feature:355431-355685:-1:exon
so has part: feature:354673-354814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375428-375883:-1:exon

position:375428:-1
position: 375428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359624-359780:-1:exon

position:359624:-1
position: 359624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359780:-1
position: 359780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359313-359438:-1:exon

position:359313:-1
position: 359313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359438:-1
position: 359438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:359034-359204:-1:exon

position:359034:-1
position: 359034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359204:-1
position: 359204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:358810-358935:-1:exon

position:358810:-1
position: 358810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358935:-1
position: 358935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:358485-358705:-1:exon

position:358485:-1
position: 358485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358705:-1
position: 358705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:358190-358394:-1:exon

position:358190:-1
position: 358190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358394:-1
position: 358394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:357949-358056:-1:exon

position:357949:-1
position: 357949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358056:-1
position: 358056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:357666-357785:-1:exon

position:357666:-1
position: 357666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357785:-1
position: 357785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:357489-357584:-1:exon

position:357489:-1
position: 357489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357584:-1
position: 357584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:355431-355685:-1:exon

position:355431:-1
position: 355431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355685:-1
position: 355685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:354673-354814:-1:exon

position:354814:-1
position: 354814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LMNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin
translation: MATPSQKRSTRSGASGTPLSPTRITRLQEKEDLQELNDRLAVYIDKVRSLELENAGLRLRITESEEVVSREVSGIKAAYESELADARKTLDSVAKERARLQLELSKVREEHKELKARNAKKEGDLLTAQARLKDVEALLNSKEAALSTALGEKRNLETEVRDLRGQVAKLESALGEAKKQLQDEMLRRVDAENRLQTLKEELEFQKNIYSEELRETKRRHETRLVEIDNGRQREFESKLSEALQELRSQHEAQIRLYKEELEKTYGAKLENAKQSAERNSNMVGAAHEELQQTRIRIDNLSSEVSQLQKQLAAKEAKLHDLEDILARERETNRRLLSDKEREMAEMRARMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERLRLSPSPSSHKGASRSHLSTPGSSKKRKLEDSESRTSFSHHARTSGRVGVEEVDLEGKFVRLRNKSNEDQAMGNWQIKRQNGDDPPITYRFPPKFTLKAGQVVTIWASGAGATHSPPSNVVWKAQSSWGSGDSLRTALINSNGEEVAMRKLVRTVIINDDEDEDDDEMSIHHRHHHGSCSGSGDPGEYNLRSRTVVCGTCGQPADKSGTQNAGINTMSSGSSSSSVTVTRSYRSMGDSGIGLGDSLVSRNYLLGNSSPRRQAQAVQNCSIM
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(join(354782..354814,355431..355685,357489..357584,357666..357785,357949..358056,358190..358394,358485..358705,358810..358935,359034..359204,359313..359438,359624..359780,375428..375777))
location: region:354782-375777:-1
so has part: feature:375428-375777:-1:exon
so has part: feature:359624-359780:-1:exon
so has part: feature:359313-359438:-1:exon
so has part: feature:359034-359204:-1:exon
so has part: feature:358810-358935:-1:exon
so has part: feature:358485-358705:-1:exon
so has part: feature:358190-358394:-1:exon
so has part: feature:357949-358056:-1:exon
so has part: feature:357666-357785:-1:exon
so has part: feature:357489-357584:-1:exon
so has part: feature:355431-355685:-1:exon
so has part: feature:354782-354814:-1:exon

XP_031949484.1
type: Protein
SIO_000068: ncbiprotein

position:354782:-1
position: 354782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375777:-1
position: 375777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375428-375777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359624-359780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359313-359438:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359034-359204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358810-358935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:358485-358705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:358190-358394:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357949-358056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357666-357785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357489-357584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:355431-355685:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:354782-354814:-1:exon

MEX3A
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 400261..412542
location: region:400261-412542:1
so has part: feature:400261-412542:1:exon
subclass of: SO_0000010

116436527
type: Gene
SIO_000068: ncbigene

position:400261:1
position: 400261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412542:1
position: 412542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400261-412542:1:exon

MEX3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEX3A
product: mex-3 RNA binding family member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_032093705.1
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: join(400261..400751,411343..412542)
location: region:400261-412542:1
so has part: feature:400261-400751:1:exon
so has part: feature:411343-412542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:400261-400751:1:exon

position:400751:1
position: 400751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:411343-412542:1:exon

position:411343:1
position: 411343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEX3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein MEX3A
translation: MPSLVVPGIMERNGGFGDLGCFGGSGKDRALLEDDRALQLALDQLCLLGLGEPSSSSSSSAVVLVEDSNNNNNNPPPPPPQQPPPPPPPPQQPPPPPPPPPAAPKGSAAPSAGAAEPKLCALYKEAELRLKSSSNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVAMARREIISAAEHFSMIRASRNKAGTTFGSAPTLPGQVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNNENDFLSSSPDSGMENRYSEAWRVHTPAPGCKPLSTFRQNSLGCIGDCSVDPVYETPRLNDQNDFNYGYLFPNYGVNKQDLYYGVPESGAPMWAGQENTNPVSVLFSKQQRSSSTGTIHPNSHRSPSSSIPEPSLSGLPRRSQGEPLQGFSKLGTPAAARTSVASSRECMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHAAATQAIRIFS
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: join(400286..400751,411343..412448)
location: region:400286-412448:1
so has part: feature:400286-400751:1:exon
so has part: feature:411343-412448:1:exon

XP_031949596.1
type: Protein
SIO_000068: ncbiprotein

position:400286:1
position: 400286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412448:1
position: 412448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400286-400751:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:411343-412448:1:exon

LOC116436459
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(424434..430430)
location: region:424434-430430:-1
so has part: feature:424434-430430:-1:exon
subclass of: SO_0000010

116436459
type: Gene
SIO_000068: ncbigene

position:424434:-1
position: 424434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430430:-1
position: 430430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424434-430430:-1:exon

LOC116436459
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116436459
product: ras-related protein Rab-11A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 112 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_032093594.1
SIO_010081: LOC116436459
subclass of: SO_0000673
so part of: LOC116436459
location: complement(join(424434..425804,426028..426108,426188..426381,426457..426652,430324..430430))
location: region:424434-430430:-1
so has part: feature:430324-430430:-1:exon
so has part: feature:426457-426652:-1:exon
so has part: feature:426188-426381:-1:exon
so has part: feature:426028-426108:-1:exon
so has part: feature:424434-425804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430324-430430:-1:exon

position:430324:-1
position: 430324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426457-426652:-1:exon

position:426457:-1
position: 426457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426652:-1
position: 426652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:426188-426381:-1:exon

position:426188:-1
position: 426188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426381:-1
position: 426381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426028-426108:-1:exon

position:426028:-1
position: 426028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426108:-1
position: 426108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:424434-425804:-1:exon

position:425804:-1
position: 425804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116436459
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116436459
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-11A-like
translation: MRGKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRAVPTDEARGFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQITGQPESEFGPSTTIEPIRVLPTQQEGRQAPCCQNI
SIO_010081: LOC116436459
subclass of: SO_0000673
so part of: LOC116436459
location: complement(join(425665..425804,426028..426108,426188..426381,426457..426652,430324..430363))
location: region:425665-430363:-1
so has part: feature:430324-430363:-1:exon
so has part: feature:426457-426652:-1:exon
so has part: feature:426188-426381:-1:exon
so has part: feature:426028-426108:-1:exon
so has part: feature:425665-425804:-1:exon

XP_031949485.1
type: Protein
SIO_000068: ncbiprotein

position:425665:-1
position: 425665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430363:-1
position: 430363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430324-430363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426457-426652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:426188-426381:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426028-426108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425665-425804:-1:exon

RAB25
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(431003..435204)
location: region:431003-435204:-1
so has part: feature:431003-435204:-1:exon
subclass of: SO_0000010

116436438
type: Gene
SIO_000068: ncbigene

position:431003:-1
position: 431003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435204:-1
position: 435204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431003-435204:-1:exon

RAB25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RAB25
product: RAB25, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_032093565.1
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: complement(join(431003..431822,432649..432729,432890..433083,433215..433410,434324..435204))
location: region:431003-435204:-1
so has part: feature:434324-435204:-1:exon
so has part: feature:433215-433410:-1:exon
so has part: feature:432890-433083:-1:exon
so has part: feature:432649-432729:-1:exon
so has part: feature:431003-431822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434324-435204:-1:exon

position:434324:-1
position: 434324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433215-433410:-1:exon

position:433215:-1
position: 433215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433410:-1
position: 433410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432890-433083:-1:exon

position:432890:-1
position: 432890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433083:-1
position: 433083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:432649-432729:-1:exon

position:432649:-1
position: 432649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432729:-1
position: 432729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431003-431822:-1:exon

position:431822:-1
position: 431822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-25
translation: MGSAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVMLVGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQKQRSSQSNTVSLASENPASTAPAQAERRPCCVAL
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: complement(join(431692..431822,432649..432729,432890..433083,433215..433410,434324..434363))
location: region:431692-434363:-1
so has part: feature:434324-434363:-1:exon
so has part: feature:433215-433410:-1:exon
so has part: feature:432890-433083:-1:exon
so has part: feature:432649-432729:-1:exon
so has part: feature:431692-431822:-1:exon

XP_031949456.1
type: Protein
SIO_000068: ncbiprotein

position:431692:-1
position: 431692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434363:-1
position: 434363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434324-434363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433215-433410:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432890-433083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432649-432729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431692-431822:-1:exon

LAMTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(435302..437217)
location: region:435302-437217:-1
so has part: feature:435302-437217:-1:exon
subclass of: SO_0000010

116436439
type: Gene
SIO_000068: ncbigene

position:435302:-1
position: 435302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437217:-1
position: 437217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435302-437217:-1:exon

LAMTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LAMTOR2
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 142 samples with support for all annotated introns
transcript id: XM_032093566.1
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: complement(join(435302..435527,435821..435910,436015..436177,437092..437217))
location: region:435302-437217:-1
so has part: feature:437092-437217:-1:exon
so has part: feature:436015-436177:-1:exon
so has part: feature:435821-435910:-1:exon
so has part: feature:435302-435527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:437092-437217:-1:exon

position:437092:-1
position: 437092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:436015-436177:-1:exon

position:436015:-1
position: 436015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436177:-1
position: 436177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:435821-435910:-1:exon

position:435821:-1
position: 435821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435910:-1
position: 435910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:435302-435527:-1:exon

position:435527:-1
position: 435527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR2
translation: MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWVAYDKNGHQAFNEDNLKFILMDCMEGRVAITRVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQVAAS
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: complement(join(435471..435527,435821..435910,436015..436177,437092..437159))
location: region:435471-437159:-1
so has part: feature:437092-437159:-1:exon
so has part: feature:436015-436177:-1:exon
so has part: feature:435821-435910:-1:exon
so has part: feature:435471-435527:-1:exon

XP_031949457.1
type: Protein
SIO_000068: ncbiprotein

position:435471:-1
position: 435471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437159:-1
position: 437159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437092-437159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436015-436177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435821-435910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:435471-435527:-1:exon

UBQLN4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 437604..449454
location: region:437604-449454:1
so has part: feature:437604-449454:1:exon
subclass of: SO_0000010

116436437
type: Gene
SIO_000068: ncbigene

position:437604:1
position: 437604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449454:1
position: 449454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437604-449454:1:exon

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: UBQLN4
product: ubiquilin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093564.1
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(437604..437796,439800..439951,442276..442481,442807..443069,444244..444402,445070..445295,445672..445811,446933..447048,447663..447840,448251..449454)
location: region:437604-449454:1
so has part: feature:437604-437796:1:exon
so has part: feature:439800-439951:1:exon
so has part: feature:442276-442481:1:exon
so has part: feature:442807-443069:1:exon
so has part: feature:444244-444402:1:exon
so has part: feature:445070-445295:1:exon
so has part: feature:445672-445811:1:exon
so has part: feature:446933-447048:1:exon
so has part: feature:447663-447840:1:exon
so has part: feature:448251-449454:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:437604-437796:1:exon

position:437796:1
position: 437796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439800-439951:1:exon

position:439800:1
position: 439800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439951:1
position: 439951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442276-442481:1:exon

position:442276:1
position: 442276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442481:1
position: 442481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:442807-443069:1:exon

position:442807:1
position: 442807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443069:1
position: 443069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:444244-444402:1:exon

position:444244:1
position: 444244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444402:1
position: 444402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:445070-445295:1:exon

position:445070:1
position: 445070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445295:1
position: 445295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:445672-445811:1:exon

position:445672:1
position: 445672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445811:1
position: 445811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:446933-447048:1:exon

position:446933:1
position: 446933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447048:1
position: 447048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:447663-447840:1:exon

position:447663:1
position: 447663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447840:1
position: 447840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:448251-449454:1:exon

position:448251:1
position: 448251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: UBQLN4
product: ubiquilin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093563.1
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(437605..437796,439800..439951,442276..442481,442807..443069,444244..444402,445070..445295,445672..445811,446253..446336,446933..447048,447663..447840,448251..449454)
location: region:437605-449454:1
so has part: feature:437605-437796:1:exon
so has part: feature:439800-439951:1:exon
so has part: feature:442276-442481:1:exon
so has part: feature:442807-443069:1:exon
so has part: feature:444244-444402:1:exon
so has part: feature:445070-445295:1:exon
so has part: feature:445672-445811:1:exon
so has part: feature:446253-446336:1:exon
so has part: feature:446933-447048:1:exon
so has part: feature:447663-447840:1:exon
so has part: feature:448251-449454:1:exon

position:437605:1
position: 437605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437605-437796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439800-439951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442276-442481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442807-443069:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444244-444402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445070-445295:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:445672-445811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446253-446336:1:exon

position:446253:1
position: 446253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446336:1
position: 446336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:446933-447048:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447663-447840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448251-449454:1:exon

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X1
translation: MAEPSGGGGGGGPGPGPGGEGQAGPGGALIRVTVKTPKDKEEIVIADGASVREFKEEISRRFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDSTSAASAPNAASAPTANPSSPAASSQPSTSSSAGPDAGSGSRRSSGSGTMGGPGDGGPNSAASILSGFGGITGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLTGNSDSSSSQPLRTENREPLPNPWSPTPPASQSQAPSSEGSTGSATTQGTPTVSNPFGLNAASIGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQNPDFAAQIMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPDSLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSASTPASASPTGGGNPHQQLMQQMIQLLAGGSSQVQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(437638..437796,439800..439951,442276..442481,442807..443069,444244..444402,445070..445295,445672..445811,446253..446336,446933..447048,447663..447840,448251..448403)
location: region:437638-448403:1
so has part: feature:437638-437796:1:exon
so has part: feature:439800-439951:1:exon
so has part: feature:442276-442481:1:exon
so has part: feature:442807-443069:1:exon
so has part: feature:444244-444402:1:exon
so has part: feature:445070-445295:1:exon
so has part: feature:445672-445811:1:exon
so has part: feature:446253-446336:1:exon
so has part: feature:446933-447048:1:exon
so has part: feature:447663-447840:1:exon
so has part: feature:448251-448403:1:exon

XP_031949454.1
type: Protein
SIO_000068: ncbiprotein

position:437638:1
position: 437638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448403:1
position: 448403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437638-437796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439800-439951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442276-442481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442807-443069:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444244-444402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445070-445295:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:445672-445811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446253-446336:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446933-447048:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447663-447840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448251-448403:1:exon

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X2
translation: MAEPSGGGGGGGPGPGPGGEGQAGPGGALIRVTVKTPKDKEEIVIADGASVREFKEEISRRFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDSTSAASAPNAASAPTANPSSPAASSQPSTSSSAGPDAGSGSRRSSGSGTMGGPGDGGPNSAASILSGFGGITGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLTGNSDSSSSQPLRTENREPLPNPWSPTPPASQSQAPSSEGSTGSATTQGTPTVSNPFGLNAASIGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQNPDFAAQMQNPDSLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSASTPASASPTGGGNPHQQLMQQMIQLLAGGSSQVQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(437638..437796,439800..439951,442276..442481,442807..443069,444244..444402,445070..445295,445672..445811,446933..447048,447663..447840,448251..448403)
location: region:437638-448403:1
so has part: feature:437638-437796:1:exon
so has part: feature:439800-439951:1:exon
so has part: feature:442276-442481:1:exon
so has part: feature:442807-443069:1:exon
so has part: feature:444244-444402:1:exon
so has part: feature:445070-445295:1:exon
so has part: feature:445672-445811:1:exon
so has part: feature:446933-447048:1:exon
so has part: feature:447663-447840:1:exon
so has part: feature:448251-448403:1:exon

XP_031949455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:437638-437796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439800-439951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442276-442481:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442807-443069:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444244-444402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445070-445295:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:445672-445811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446933-447048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447663-447840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:448251-448403:1:exon

LOC116436441
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116436441
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(451626..455486)
location: region:451626-455486:-1
so has part: feature:451626-455486:-1:exon
subclass of: SO_0000011

116436441
type: Gene
SIO_000068: ncbigene

position:451626:-1
position: 451626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455486:-1
position: 455486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:451626-455486:-1:exon

LOC116436441
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116436441
product: uncharacterized LOC116436441
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XR_004237015.1
SIO_010081: LOC116436441
subclass of: SO_0000673
so part of: LOC116436441
location: complement(join(451626..452491,455268..455486))
location: region:451626-455486:-1
so has part: feature:455268-455486:-1:exon
so has part: feature:451626-452491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:455268-455486:-1:exon

position:455268:-1
position: 455268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451626-452491:-1:exon

position:452491:-1
position: 452491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPATCH4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 457026..459677
location: region:457026-459677:1
so has part: feature:457026-459677:1:exon
subclass of: SO_0000010

116436473
type: Gene
SIO_000068: ncbigene

position:457026:1
position: 457026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459677:1
position: 459677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457026-459677:1:exon

GPATCH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: GPATCH4
product: G-patch domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_032093615.1
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: join(457026..457214,457672..457745,457828..457920,458152..458259,458371..458471,458592..458642,458768..459677)
location: region:457026-459677:1
so has part: feature:457026-457214:1:exon
so has part: feature:457672-457745:1:exon
so has part: feature:457828-457920:1:exon
so has part: feature:458152-458259:1:exon
so has part: feature:458371-458471:1:exon
so has part: feature:458592-458642:1:exon
so has part: feature:458768-459677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457026-457214:1:exon

position:457214:1
position: 457214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457672-457745:1:exon

position:457672:1
position: 457672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457745:1
position: 457745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457828-457920:1:exon

position:457828:1
position: 457828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457920:1
position: 457920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:458152-458259:1:exon

position:458152:1
position: 458152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458259:1
position: 458259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:458371-458471:1:exon

position:458371:1
position: 458371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458471:1
position: 458471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:458592-458642:1:exon

position:458592:1
position: 458592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458642:1
position: 458642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:458768-459677:1:exon

position:458768:1
position: 458768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4
translation: MSAPGPPGRGMLFAETQLRRHGWRRGQGLGRREDGIAEAIRVKVKCDTAGVGHDAAEPFTFHWWDHVFNEAAANIAVEAGQDGISVKALSEQGGRISNKKPRKAGNSGSLLYGRFVKSATLTACGEESVTLPASSESSEEEEKLDLSSVRRLTDEELVQACGGRTAHKGARHGLTMSAKLARLEEQERAFLATYWQRERQQEPPESSQGKKKKRKQSRDGANPKVPQSQEPNREQEEVLEEEKVVKMKKKNQGQSREEELTGEEEVMRKKKKKVTEHCGEEVSGEEEKVMKRKKKKKPELSTEEEVVEGEGKAAKRRKKKKKQQEEEDKEELAETDIPLEDTDEPNLGHSPTKKRKKKKRKEEPE
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: join(457139..457214,457672..457745,457828..457920,458152..458259,458371..458471,458592..458642,458768..459362)
location: region:457139-459362:1
so has part: feature:457139-457214:1:exon
so has part: feature:457672-457745:1:exon
so has part: feature:457828-457920:1:exon
so has part: feature:458152-458259:1:exon
so has part: feature:458371-458471:1:exon
so has part: feature:458592-458642:1:exon
so has part: feature:458768-459362:1:exon

XP_031949506.1
type: Protein
SIO_000068: ncbiprotein

position:457139:1
position: 457139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459362:1
position: 459362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457139-457214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457672-457745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457828-457920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:458152-458259:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:458371-458471:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:458592-458642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:458768-459362:1:exon

NAXE
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(459637..461895)
location: region:459637-461895:-1
so has part: feature:459637-461895:-1:exon
subclass of: SO_0000010

116436474
type: Gene
SIO_000068: ncbigene

position:459637:-1
position: 459637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461895:-1
position: 461895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459637-461895:-1:exon

NAXE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NAXE
product: NAD(P)HX epimerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032093616.1
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(459637..460158,460241..460388,460471..460584,460705..460815,461232..461340,461622..461895))
location: region:459637-461895:-1
so has part: feature:461622-461895:-1:exon
so has part: feature:461232-461340:-1:exon
so has part: feature:460705-460815:-1:exon
so has part: feature:460471-460584:-1:exon
so has part: feature:460241-460388:-1:exon
so has part: feature:459637-460158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461622-461895:-1:exon

position:461622:-1
position: 461622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:461232-461340:-1:exon

position:461232:-1
position: 461232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461340:-1
position: 461340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460705-460815:-1:exon

position:460705:-1
position: 460705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460815:-1
position: 460815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460471-460584:-1:exon

position:460471:-1
position: 460471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460584:-1
position: 460584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:460241-460388:-1:exon

position:460241:-1
position: 460241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460388:-1
position: 460388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459637-460158:-1:exon

position:460158:-1
position: 460158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAXE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase
translation: MPSPRALLGLGLLVAAARAGGRCRGWGWERDWDRERCRCLPRRAMHVPSAGSGPTGLRFLGQEEAQAIDQELFTEYKFSVDQLMELAGLSCATAIAKAYPPSSFTTSQPTVLVVCGPGNNGGDGLVCARHLKMFGYQPTVYYPKRPSKPLFEGLTTQCKKMDIPFLPEFPSEAAFIDELYGLVVDAIFGFSFKGAVREPFGSILSTLERVTVPIASIDIPSGWDVEKGKADGLQPDMLISLTAPKKAAMHFTGRYHFLGGRFVPPALQEKYALNLPAYPSTDCVLQLT
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(459956..460158,460241..460388,460471..460584,460705..460815,461232..461340,461622..461803))
location: region:459956-461803:-1
so has part: feature:461622-461803:-1:exon
so has part: feature:461232-461340:-1:exon
so has part: feature:460705-460815:-1:exon
so has part: feature:460471-460584:-1:exon
so has part: feature:460241-460388:-1:exon
so has part: feature:459956-460158:-1:exon

XP_031949507.1
type: Protein
SIO_000068: ncbiprotein

position:459956:-1
position: 459956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461803:-1
position: 461803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461622-461803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:461232-461340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460705-460815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460471-460584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:460241-460388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459956-460158:-1:exon

TTC24
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(462055..466127)
location: region:462055-466127:-1
so has part: feature:462055-466127:-1:exon
subclass of: SO_0000010

116436472
type: Gene
SIO_000068: ncbigene

position:462055:-1
position: 462055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466127:-1
position: 466127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462055-466127:-1:exon

TTC24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TTC24
product: tetratricopeptide repeat domain 24, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032093614.1
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(462055..462896,463137..463269,463385..463449,463550..463620,463739..463855,463973..464094,464231..464359,464443..464661,464739..465563,465856..466127))
location: region:462055-466127:-1
so has part: feature:465856-466127:-1:exon
so has part: feature:464739-465563:-1:exon
so has part: feature:464443-464661:-1:exon
so has part: feature:464231-464359:-1:exon
so has part: feature:463973-464094:-1:exon
so has part: feature:463739-463855:-1:exon
so has part: feature:463550-463620:-1:exon
so has part: feature:463385-463449:-1:exon
so has part: feature:463137-463269:-1:exon
so has part: feature:462055-462896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465856-466127:-1:exon

position:465856:-1
position: 465856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464739-465563:-1:exon

position:464739:-1
position: 464739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465563:-1
position: 465563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464443-464661:-1:exon

position:464443:-1
position: 464443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464661:-1
position: 464661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464231-464359:-1:exon

position:464231:-1
position: 464231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464359:-1
position: 464359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:463973-464094:-1:exon

position:463973:-1
position: 463973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464094:-1
position: 464094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:463739-463855:-1:exon

position:463739:-1
position: 463739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463855:-1
position: 463855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:463550-463620:-1:exon

position:463550:-1
position: 463550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463620:-1
position: 463620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:463385-463449:-1:exon

position:463385:-1
position: 463385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463449:-1
position: 463449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:463137-463269:-1:exon

position:463137:-1
position: 463137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463269:-1
position: 463269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:462055-462896:-1:exon

position:462896:-1
position: 462896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TTC24
product: tetratricopeptide repeat domain 24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032093613.1
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(462055..462247,463137..463269,463385..463449,463550..463620,463739..463855,463973..464359,464443..465563,465856..466127))
location: region:462055-466127:-1
so has part: feature:465856-466127:-1:exon
so has part: feature:464443-465563:-1:exon
so has part: feature:463973-464359:-1:exon
so has part: feature:463739-463855:-1:exon
so has part: feature:463550-463620:-1:exon
so has part: feature:463385-463449:-1:exon
so has part: feature:463137-463269:-1:exon
so has part: feature:462055-462247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465856-466127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464443-465563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:463973-464359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463739-463855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463550-463620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463385-463449:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:463137-463269:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462055-462247:-1:exon

position:462247:-1
position: 462247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TTC24
product: tetratricopeptide repeat domain 24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_032093612.1
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(462055..462896,463137..463269,463385..463449,463550..463620,463739..463855,463973..464359,464443..465563,465856..466127))
location: region:462055-466127:-1
so has part: feature:465856-466127:-1:exon
so has part: feature:464443-465563:-1:exon
so has part: feature:463973-464359:-1:exon
so has part: feature:463739-463855:-1:exon
so has part: feature:463550-463620:-1:exon
so has part: feature:463385-463449:-1:exon
so has part: feature:463137-463269:-1:exon
so has part: feature:462055-462896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465856-466127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464443-465563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:463973-464359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463739-463855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463550-463620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463385-463449:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:463137-463269:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462055-462896:-1:exon

TTC24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 24 isoform X2
translation: MDSEEAADLGVKPTTLTHPTTPCAPTTTTTPAAPTAPTSCKKSWKKKEKAEAREAAREGGDEAAGRVAAIEGLTRAGHRALALGAGREAVGCFRKALLLSRDMVSPQIHRACAFNLGAAYVETGKPKKGLEFLLQSQPSEAESRDHLGSLYFNVGAAHEGLRDFPKALECFEKVAGHASAAQAGGRAGTCVQMGCCYLGMREPARAARCFLDAAQTYAAAESPEAAAVALSRASGSMLQSRRFRAAEIARVLARCRSLCETIPDLALRGNAAPHPSFSGPWGAAPTPAFPLCPQGNSTTTSASATPSSTSSPWLPRALSRPSGSAVGSRSGTGAGRLRCCRTWVLPTTPCAASARRWAGTGVRPRCTVLWGTGGLRGSALGTWRMPAASSGTTELPPRTTCTPCKPSGTRVRGGTGTPLGGVCSIRVPSGLKLGDAACRGSRLSRAGTDAALCLPGDLQGQWQACEGLGSACFHLGDPQKAIGHYQEALILLSHCQDSPRAAHKRVVHKLTDAIQRRLRLSHLSYQGGWAPTPALEPSQLQFCSTLPRASRTRLQGSEVGKAQAADELLMCMPGACPRHSGTGVAPTGGLALEPCNPHGLLGTSGEDDDGPSSAPGYHSEPKVNSLDDDPTATAAGCWSRRGPRTGTRTLSLLCSLV
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(462148..462247,463137..463269,463385..463449,463550..463620,463739..463855,463973..464359,464443..465543))
location: region:462148-465543:-1
so has part: feature:464443-465543:-1:exon
so has part: feature:463973-464359:-1:exon
so has part: feature:463739-463855:-1:exon
so has part: feature:463550-463620:-1:exon
so has part: feature:463385-463449:-1:exon
so has part: feature:463137-463269:-1:exon
so has part: feature:462148-462247:-1:exon

XP_031949504.1
type: Protein
SIO_000068: ncbiprotein

position:462148:-1
position: 462148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465543:-1
position: 465543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464443-465543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463973-464359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:463739-463855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463550-463620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463385-463449:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463137-463269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462148-462247:-1:exon

TTC24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 24 isoform X3
translation: MDSEEAADLGVKPTTLTHPTTPCAPTTTTTPAAPTAPTSCKKSWKKKEKAEAREAAREGGDEAAGRVAAIEGLTRAGHRALALGAGREAVGCFRKALLLSRDMVSPQIHRACAFNLGAAYVETGKPKKGLEFLLQSQPSEAESRDHLGSLYFNVGAAHEGLRDFPKALECFEKVAGHASAAQAGGRAGTCVQMGCCYLGMREPARAARCFLDAAQTYAAAESPEAAAVALSRASGSMLQSRRFRAAEIARVLARCRSLCETIPDLALRGKLYNDIGLGYSQLHIFSLAAESFEQALGLCGGEPERDGRREAALLQNLGAAHNALRSFGSALGWHRRAAALHGALGNRRAQGQCFGNLAYACSQLGNHGAAAENYLHALQAFRDSGDLQGQWQACEGLGSACFHLGDPQKAIGHYQEALILLSHCQDSPRAAHKRVVHKLTDAIQRRLRLSHLSYQGGWAPTPALEPSQLQFCSTLPRASRTRLQGSEVGKAQAADELLMCMPGACPRHSGTGVAPTGGLALEPCNPHGLLGTSGEDDDGPSSAPGYHSEPKVNSKRTTSPLHPAKPPHAGPRLHKYHTQPELGFPSEPRPVGLTLHSSGHQNHQTLHPRAPER
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(462716..462896,463137..463269,463385..463449,463550..463620,463739..463855,463973..464094,464231..464359,464443..464661,464739..465543))
location: region:462716-465543:-1
so has part: feature:464739-465543:-1:exon
so has part: feature:464443-464661:-1:exon
so has part: feature:464231-464359:-1:exon
so has part: feature:463973-464094:-1:exon
so has part: feature:463739-463855:-1:exon
so has part: feature:463550-463620:-1:exon
so has part: feature:463385-463449:-1:exon
so has part: feature:463137-463269:-1:exon
so has part: feature:462716-462896:-1:exon

XP_031949505.1
type: Protein
SIO_000068: ncbiprotein

position:462716:-1
position: 462716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464739-465543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464443-464661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464231-464359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463973-464094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463739-463855:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463550-463620:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:463385-463449:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:463137-463269:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:462716-462896:-1:exon

TTC24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 24 isoform X1
translation: MDSEEAADLGVKPTTLTHPTTPCAPTTTTTPAAPTAPTSCKKSWKKKEKAEAREAAREGGDEAAGRVAAIEGLTRAGHRALALGAGREAVGCFRKALLLSRDMVSPQIHRACAFNLGAAYVETGKPKKGLEFLLQSQPSEAESRDHLGSLYFNVGAAHEGLRDFPKALECFEKVAGHASAAQAGGRAGTCVQMGCCYLGMREPARAARCFLDAAQTYAAAESPEAAAVALSRASGSMLQSRRFRAAEIARVLARCRSLCETIPDLALRGNAAPHPSFSGPWGAAPTPAFPLCPQGNSTTTSASATPSSTSSPWLPRALSRPSGSAVGSRSGTGAGRLRCCRTWVLPTTPCAASARRWAGTGVRPRCTVLWGTGGLRGSALGTWRMPAASSGTTELPPRTTCTPCKPSGTRVRGGTGTPLGGVCSIRVPSGLKLGDAACRGSRLSRAGTDAALCLPGDLQGQWQACEGLGSACFHLGDPQKAIGHYQEALILLSHCQDSPRAAHKRVVHKLTDAIQRRLRLSHLSYQGGWAPTPALEPSQLQFCSTLPRASRTRLQGSEVGKAQAADELLMCMPGACPRHSGTGVAPTGGLALEPCNPHGLLGTSGEDDDGPSSAPGYHSEPKVNSKRTTSPLHPAKPPHAGPRLHKYHTQPELGFPSEPRPVGLTLHSSGHQNHQTLHPRAPER
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(462716..462896,463137..463269,463385..463449,463550..463620,463739..463855,463973..464359,464443..465543))
location: region:462716-465543:-1
so has part: feature:464443-465543:-1:exon
so has part: feature:463973-464359:-1:exon
so has part: feature:463739-463855:-1:exon
so has part: feature:463550-463620:-1:exon
so has part: feature:463385-463449:-1:exon
so has part: feature:463137-463269:-1:exon
so has part: feature:462716-462896:-1:exon

XP_031949503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464443-465543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463973-464359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:463739-463855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463550-463620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463385-463449:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463137-463269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462716-462896:-1:exon

IQGAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 468063..483132
location: region:468063-483132:1
so has part: feature:468063-483132:1:exon
subclass of: SO_0000010

116436471
type: Gene
SIO_000068: ncbigene

position:468063:1
position: 468063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483132:1
position: 483132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468063-483132:1:exon

IQGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IQGAP3
product: IQ motif containing GTPase activating protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032093611.1
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: join(468063..468087,468744..468831,469178..469334,469567..469644,469826..469902,470034..470101,470368..470481,470896..471074,471376..471463,471716..471879,472059..472146,472292..472455,472615..472775,472991..473115,473291..473454,473646..473736,473818..473985,474103..474245,474319..474489,474776..474859,475342..475413,475959..476028,476411..476619,476828..476980,477091..477254,477399..477623,477709..477849,478321..478405,478701..478933,479021..479153,479448..479550,479708..479852,480016..480103,480348..480560,480681..480847,481001..481102,481473..481581,481837..483132)
location: region:468063-483132:1
so has part: feature:468063-468087:1:exon
so has part: feature:468744-468831:1:exon
so has part: feature:469178-469334:1:exon
so has part: feature:469567-469644:1:exon
so has part: feature:469826-469902:1:exon
so has part: feature:470034-470101:1:exon
so has part: feature:470368-470481:1:exon
so has part: feature:470896-471074:1:exon
so has part: feature:471376-471463:1:exon
so has part: feature:471716-471879:1:exon
so has part: feature:472059-472146:1:exon
so has part: feature:472292-472455:1:exon
so has part: feature:472615-472775:1:exon
so has part: feature:472991-473115:1:exon
so has part: feature:473291-473454:1:exon
so has part: feature:473646-473736:1:exon
so has part: feature:473818-473985:1:exon
so has part: feature:474103-474245:1:exon
so has part: feature:474319-474489:1:exon
so has part: feature:474776-474859:1:exon
so has part: feature:475342-475413:1:exon
so has part: feature:475959-476028:1:exon
so has part: feature:476411-476619:1:exon
so has part: feature:476828-476980:1:exon
so has part: feature:477091-477254:1:exon
so has part: feature:477399-477623:1:exon
so has part: feature:477709-477849:1:exon
so has part: feature:478321-478405:1:exon
so has part: feature:478701-478933:1:exon
so has part: feature:479021-479153:1:exon
so has part: feature:479448-479550:1:exon
so has part: feature:479708-479852:1:exon
so has part: feature:480016-480103:1:exon
so has part: feature:480348-480560:1:exon
so has part: feature:480681-480847:1:exon
so has part: feature:481001-481102:1:exon
so has part: feature:481473-481581:1:exon
so has part: feature:481837-483132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:468063-468087:1:exon

position:468087:1
position: 468087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:468744-468831:1:exon

position:468744:1
position: 468744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468831:1
position: 468831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:469178-469334:1:exon

position:469178:1
position: 469178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469334:1
position: 469334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:469567-469644:1:exon

position:469567:1
position: 469567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469644:1
position: 469644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:469826-469902:1:exon

position:469826:1
position: 469826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469902:1
position: 469902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:470034-470101:1:exon

position:470034:1
position: 470034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470101:1
position: 470101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:470368-470481:1:exon

position:470368:1
position: 470368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470481:1
position: 470481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:470896-471074:1:exon

position:470896:1
position: 470896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471074:1
position: 471074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:471376-471463:1:exon

position:471376:1
position: 471376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471463:1
position: 471463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:471716-471879:1:exon

position:471716:1
position: 471716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471879:1
position: 471879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:472059-472146:1:exon

position:472059:1
position: 472059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472146:1
position: 472146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:472292-472455:1:exon

position:472292:1
position: 472292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472455:1
position: 472455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:472615-472775:1:exon

position:472615:1
position: 472615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472775:1
position: 472775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:472991-473115:1:exon

position:472991:1
position: 472991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473115:1
position: 473115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:473291-473454:1:exon

position:473291:1
position: 473291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473454:1
position: 473454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:473646-473736:1:exon

position:473646:1
position: 473646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473736:1
position: 473736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:473818-473985:1:exon

position:473818:1
position: 473818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473985:1
position: 473985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:474103-474245:1:exon

position:474103:1
position: 474103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474245:1
position: 474245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:474319-474489:1:exon

position:474319:1
position: 474319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474489:1
position: 474489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:474776-474859:1:exon

position:474776:1
position: 474776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474859:1
position: 474859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:475342-475413:1:exon

position:475342:1
position: 475342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475413:1
position: 475413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:475959-476028:1:exon

position:475959:1
position: 475959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476028:1
position: 476028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:476411-476619:1:exon

position:476411:1
position: 476411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476619:1
position: 476619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:476828-476980:1:exon

position:476828:1
position: 476828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476980:1
position: 476980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:477091-477254:1:exon

position:477091:1
position: 477091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477254:1
position: 477254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:477399-477623:1:exon

position:477399:1
position: 477399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477623:1
position: 477623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:477709-477849:1:exon

position:477709:1
position: 477709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477849:1
position: 477849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:478321-478405:1:exon

position:478321:1
position: 478321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478405:1
position: 478405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:478701-478933:1:exon

position:478701:1
position: 478701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478933:1
position: 478933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:479021-479153:1:exon

position:479021:1
position: 479021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479153:1
position: 479153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:479448-479550:1:exon

position:479448:1
position: 479448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479550:1
position: 479550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:479708-479852:1:exon

position:479708:1
position: 479708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479852:1
position: 479852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:480016-480103:1:exon

position:480016:1
position: 480016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480103:1
position: 480103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:480348-480560:1:exon

position:480348:1
position: 480348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480560:1
position: 480560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:480681-480847:1:exon

position:480681:1
position: 480681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480847:1
position: 480847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:481001-481102:1:exon

position:481001:1
position: 481001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481102:1
position: 481102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:481473-481581:1:exon

position:481473:1
position: 481473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481581:1
position: 481581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:481837-483132:1:exon

position:481837:1
position: 481837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IQGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3
translation: MEGAGPGRCERPTAEEMDEQRRQNVAYQYLCHLEEAKRWMEACLGEGLPPPTELEESLRNGVLLAKLGHCFAPAIVPLKKIYDPEQTRYKAAGLHFRHTDNINYWRDAMSHVGLPSIFHPETTDIYDKKNMPRVVYCIHALSLYLFKLGLAPLIQDLYGKVDFTEEEINNMKRELEKYGLQLPAFSKIGGILANELSVDEAAVHAAVLAINEAVERGVVAQTMETLHNPHAMLVGLREELADAYQEVLHQAKLEKGSNARNRYVQVIPEGEDVYDWCLTQAEIQGNINKVNVRGALEEVDSALERQDVLALHRALQDPTLALRCLQRDNLELYLEQLSVDREEKALELGYLELLEQEEVQAGILTANRRDEKERAMLQAVGRINAAVRRGMPAETLEALMDPAAQLPDVHAPAAPLYQHQLALLQCQHPRGELAQEELFVAVEMLSAVALVNQALDARDPNRLWSSLVSPALGLSGVEDANAQRYFDDLLQLKGQSRRAGAEFLSWNDIQDSVNSTNLSVQDENNRVHAVRLVNEALLQADPEKTLAALLLLAPALPDIALPTAPRYHSVLSRARRQKVQATEDNGAVLWWEEIQEGVCQANQDTVAARSMALGTAAINQAIKEGKASQTLRVLCNPDVALRGVVSACADAYQEQLAALMATKRPAGSAKPSWIRHRLLDGAEYYLNLQTLEGSWQCPHNGSFNTTHLSREEIQSVITRVAAAHGRQCLWASNVALVVRLQARLRGFLVRREFAARRHVLCQQRLAAIRIQACWRGYRQRRAYLERLHYLKANTEAAIKIQAAVRMWQAQRKYQERLRYFRQKIKAVIKIQAFVRANKARGDYRMLVHTKSPPLGIVRRFIHLLEQSQHDFWEESEVLRLQEEVVKGIRASRQLESDLDLMDIKIGLLVKNRITLQEVVSHCKKLTKKNKEQLSEMMSMDKQKGLKSLSKEKRQKLEAYQHLFYLLQTQPVYLARLIFQMPQNKSTKFMESVIFTLYNYASNPREAYLLLQLFKVALQEEIRSKVDHVHDILTGNATVIRLVVSFYRNVRGQKALRHILAGPVQEVLQDKTFSIRTDPVDIYKAWINQTESQSGHRSKLPYEVSPEQALSHPEVQRRLDISIRNLLAITDKFVSAITSSVDKIPYGMRYMAKILRMSLVEKFPKAPAEEVDKIVGNLLYYRFMNPAVVAPDGFDIVDVSAGAALHPDHRRSLGSIANVLQHAAARKAFEGESAHLCGLNQYLEDTHNKFRRFISAACCVPEPEERFNMDEYSEMVAVAKPVIYITVGELINTHKLLLEHQDSIAPHHSDPLHELLEDLDELPTVQSLVGESVASLGDSGAEQVLSQLSRTEISLTLTNKLVPAASSEESDTRSLLLSTKQMLVDLIQSQPGDSLPEILWTPASEHEEAAHERLVRRRALRDAQASAPLKRHRSLAANGQLSMEEKKRKVIRNLRRLESLGLVDSANRYQELVDELAKDIRNQRRHRQQRHRELLKLRQTLEGLDAKTLFYEEQIDYYNQYIKTCLDNLAASNKVSGKSKKLPSLHYTAAQLWEKGVLLEIQDLPPSQLRNVIFDIIPCEESGRFQVKAKFMGIDMEHFQLHYQDLLQLQYEGVAVMKMFDKAKVNVNLLIFLLNKKFFKK
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: join(468063..468087,468744..468831,469178..469334,469567..469644,469826..469902,470034..470101,470368..470481,470896..471074,471376..471463,471716..471879,472059..472146,472292..472455,472615..472775,472991..473115,473291..473454,473646..473736,473818..473985,474103..474245,474319..474489,474776..474859,475342..475413,475959..476028,476411..476619,476828..476980,477091..477254,477399..477623,477709..477849,478321..478405,478701..478933,479021..479153,479448..479550,479708..479852,480016..480103,480348..480560,480681..480847,481001..481102,481473..481581,481837..481950)
location: region:468063-481950:1
so has part: feature:468063-468087:1:exon
so has part: feature:468744-468831:1:exon
so has part: feature:469178-469334:1:exon
so has part: feature:469567-469644:1:exon
so has part: feature:469826-469902:1:exon
so has part: feature:470034-470101:1:exon
so has part: feature:470368-470481:1:exon
so has part: feature:470896-471074:1:exon
so has part: feature:471376-471463:1:exon
so has part: feature:471716-471879:1:exon
so has part: feature:472059-472146:1:exon
so has part: feature:472292-472455:1:exon
so has part: feature:472615-472775:1:exon
so has part: feature:472991-473115:1:exon
so has part: feature:473291-473454:1:exon
so has part: feature:473646-473736:1:exon
so has part: feature:473818-473985:1:exon
so has part: feature:474103-474245:1:exon
so has part: feature:474319-474489:1:exon
so has part: feature:474776-474859:1:exon
so has part: feature:475342-475413:1:exon
so has part: feature:475959-476028:1:exon
so has part: feature:476411-476619:1:exon
so has part: feature:476828-476980:1:exon
so has part: feature:477091-477254:1:exon
so has part: feature:477399-477623:1:exon
so has part: feature:477709-477849:1:exon
so has part: feature:478321-478405:1:exon
so has part: feature:478701-478933:1:exon
so has part: feature:479021-479153:1:exon
so has part: feature:479448-479550:1:exon
so has part: feature:479708-479852:1:exon
so has part: feature:480016-480103:1:exon
so has part: feature:480348-480560:1:exon
so has part: feature:480681-480847:1:exon
so has part: feature:481001-481102:1:exon
so has part: feature:481473-481581:1:exon
so has part: feature:481837-481950:1:exon

XP_031949502.1
type: Protein
SIO_000068: ncbiprotein

position:481950:1
position: 481950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468063-468087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:468744-468831:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:469178-469334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469567-469644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469826-469902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470034-470101:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:470368-470481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470896-471074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471376-471463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471716-471879:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:472059-472146:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:472292-472455:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:472615-472775:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:472991-473115:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:473291-473454:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473646-473736:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:473818-473985:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:474103-474245:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:474319-474489:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:474776-474859:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:475342-475413:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:475959-476028:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:476411-476619:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:476828-476980:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:477091-477254:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:477399-477623:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:477709-477849:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:478321-478405:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:478701-478933:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:479021-479153:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:479448-479550:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:479708-479852:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:480016-480103:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:480348-480560:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:480681-480847:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:481001-481102:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:481473-481581:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:481837-481950:1:exon

MEF2D
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 485798..586638
location: region:485798-586638:1
so has part: feature:485798-586638:1:exon
subclass of: SO_0000010

116436532
type: Gene
SIO_000068: ncbigene

position:485798:1
position: 485798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586638:1
position: 586638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485798-586638:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032093717.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(485798..486109,546913..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..586638)
location: region:485798-586638:1
so has part: feature:485798-486109:1:exon
so has part: feature:546913-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-586638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:485798-486109:1:exon

position:486109:1
position: 486109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546913-547205:1:exon

position:546913:1
position: 546913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547205:1
position: 547205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553282-553485:1:exon

position:553282:1
position: 553282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553485:1
position: 553485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:560254-560391:1:exon

position:560254:1
position: 560254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560391:1
position: 560391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:563965-564175:1:exon

position:563965:1
position: 563965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564175:1
position: 564175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:566860-566916:1:exon

position:566860:1
position: 566860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566916:1
position: 566916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:570645-570835:1:exon

position:570645:1
position: 570645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570835:1
position: 570835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:571186-571206:1:exon

position:571186:1
position: 571186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571206:1
position: 571206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:574365-574494:1:exon

position:574365:1
position: 574365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574494:1
position: 574494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:577565-577811:1:exon

position:577565:1
position: 577565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577811:1
position: 577811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:579359-586638:1:exon

position:579359:1
position: 579359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_032093709.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(504191..504273,529598..529666,546913..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..586638)
location: region:504191-586638:1
so has part: feature:504191-504273:1:exon
so has part: feature:529598-529666:1:exon
so has part: feature:546913-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-586638:1:exon

position:504191:1
position: 504191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504191-504273:1:exon

position:504273:1
position: 504273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529598-529666:1:exon

position:529598:1
position: 529598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529666:1
position: 529666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:546913-547205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:579359-586638:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_032093719.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(504191..504273,529598..529666,546913..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,574365..574494,577565..577811,579359..586638)
location: region:504191-586638:1
so has part: feature:504191-504273:1:exon
so has part: feature:529598-529666:1:exon
so has part: feature:546913-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-586638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504191-504273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529598-529666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546913-547205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:579359-586638:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032093718.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(504191..504273,529598..529666,546913..547205,553282..553485,560525..560659,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..586638)
location: region:504191-586638:1
so has part: feature:504191-504273:1:exon
so has part: feature:529598-529666:1:exon
so has part: feature:546913-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560525-560659:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-586638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504191-504273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529598-529666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546913-547205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560525-560659:1:exon

position:560525:1
position: 560525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560659:1
position: 560659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:579359-586638:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032093720.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(504191..504273,529598..529666,546913..547205,553282..553485,560525..560659,563965..564175,566860..566916,570645..570835,574365..574494,577565..577811,579359..586638)
location: region:504191-586638:1
so has part: feature:504191-504273:1:exon
so has part: feature:529598-529666:1:exon
so has part: feature:546913-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560525-560659:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-586638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504191-504273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529598-529666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546913-547205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560525-560659:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:579359-586638:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_032093713.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(504196..504273,546913..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..586638)
location: region:504196-586638:1
so has part: feature:504196-504273:1:exon
so has part: feature:546913-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-586638:1:exon

position:504196:1
position: 504196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504196-504273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546913-547205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:579359-586638:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_032093711.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(504593..504714,529598..529666,546913..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..586638)
location: region:504593-586638:1
so has part: feature:504593-504714:1:exon
so has part: feature:529598-529666:1:exon
so has part: feature:546913-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-586638:1:exon

position:504593:1
position: 504593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504593-504714:1:exon

position:504714:1
position: 504714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529598-529666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546913-547205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:579359-586638:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_032093712.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(504593..504714,546913..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..586638)
location: region:504593-586638:1
so has part: feature:504593-504714:1:exon
so has part: feature:546913-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-586638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504593-504714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546913-547205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:579359-586638:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_032093714.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(532955..533062,546913..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..586638)
location: region:532955-586638:1
so has part: feature:532955-533062:1:exon
so has part: feature:546913-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-586638:1:exon

position:532955:1
position: 532955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532955-533062:1:exon

position:533062:1
position: 533062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546913-547205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:579359-586638:1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032093715.1
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(533642..533719,546913..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..586638)
location: region:533642-586638:1
so has part: feature:533642-533719:1:exon
so has part: feature:546913-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-586638:1:exon

position:533642:1
position: 533642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533642-533719:1:exon

position:533719:1
position: 533719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546913-547205:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:579359-586638:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(547152..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..579689)
location: region:547152-579689:1
so has part: feature:547152-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-579689:1:exon

XP_031949600.1
type: Protein
SIO_000068: ncbiprotein

position:547152:1
position: 547152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579689:1
position: 579689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547152-547205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579359-579689:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(547152..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..579689)
location: region:547152-579689:1
so has part: feature:547152-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-579689:1:exon

XP_031949602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547152-547205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579359-579689:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(547152..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..579689)
location: region:547152-579689:1
so has part: feature:547152-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-579689:1:exon

XP_031949603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547152-547205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579359-579689:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(547152..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..579689)
location: region:547152-579689:1
so has part: feature:547152-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-579689:1:exon

XP_031949604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547152-547205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579359-579689:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(547152..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..579689)
location: region:547152-579689:1
so has part: feature:547152-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-579689:1:exon

XP_031949605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547152-547205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579359-579689:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(547152..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..579689)
location: region:547152-579689:1
so has part: feature:547152-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-579689:1:exon

XP_031949606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547152-547205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579359-579689:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(547152..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,571186..571206,574365..574494,577565..577811,579359..579689)
location: region:547152-579689:1
so has part: feature:547152-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:571186-571206:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-579689:1:exon

XP_031949608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547152-547205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563965-564175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566860-566916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570645-570835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571186-571206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574365-574494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577565-577811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579359-579689:1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X3
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVTNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPTSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: join(547152..547205,553282..553485,560254..560391,563965..564175,566860..566916,570645..570835,574365..574494,577565..577811,579359..579689)
location: region:547152-579689:1
so has part: feature:547152-547205:1:exon
so has part: feature:553282-553485:1:exon
so has part: feature:560254-560391:1:exon
so has part: feature:563965-564175:1:exon
so has part: feature:566860-566916:1:exon
so has part: feature:570645-570835:1:exon
so has part: feature:574365-574494:1:exon
so has part: feature:577565-577811:1:exon
so has part: feature:579359-579689:1:exon

XP_031949610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:547152-547205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553282-553485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560254-560391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563965-564175:1:exon