Corvus moneduloides isolate bCorMon1 chromosome 15, bCorMon1.pri, whole genome shotgun sequence.
type: Entry
definition: Corvus moneduloides isolate bCorMon1 chromosome 15, bCorMon1.pri, whole genome shotgun sequence.
sequence version: NC_045490.1
sequence date: 2020-01-23
sequence: sequence
division: CON
label: NC_045490.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA599199
dblink: SAMN12368441
keyword: WGS
keyword: RefSeq
source: Corvus moneduloides (New Caledonian crow)
organism: Corvus moneduloides
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM018821.1.\nAssembly name: bCorMon1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/11/14. The original whole-genome shotgun project has the\naccession WHPO00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n + Arrow v. 6.0.0.47841; purge_dups v.\n github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Bionano solve v. 3.2.1_04122018; Salsa\n HiC v. 2.2; Arrow polishing + gap filling\n v. SMRTlink_6.0.0.47841; longranger\n alignment v. 2.2.2; freebayes polishing\n v. 1.3.1; gEVAL manual curation v. 26 SEP\n 2019; VGP assembly pipeline v. 1.6\nAssembly Name :: bCorMon1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.08x\nSequencing Technology :: PacBio Sequel I; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus moneduloides Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19370643
topology: linear
so has quality: SO_0000987
location: 1..19370643
location: region:1-19370643:1
RO_0002162: 1196302

NC_045490
type: RefSeq
SIO_000068: refseq

PRJNA599199
type: BioProject
SIO_000068: bioproject

SAMN12368441
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19370643:1
position: 19370643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19370643:1:source
so part of: sequence
organism: Corvus moneduloides
mol type: genomic DNA
isolate: bCorMon1
chromosome: 15
sex: female
tissue type: blood
country: New Caledonia: near Bourail
lat lon: 21.599296 S 165.398128 E
collection date: 17-Oct-2018
collected by: Matthew Steele

1196302
type: Taxonomy
SIO_000068: taxonomy

LOC116451351
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451351
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 27782..36693
location: region:27782-36693:1
so has part: feature:27782-36693:1:exon
subclass of: SO_0000011

116451351
type: Gene
SIO_000068: ncbigene

position:27782:1
position: 27782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36693:1
position: 36693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27782-36693:1:exon

LOC116451351
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451351
product: uncharacterized LOC116451351
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XR_004243185.1
SIO_010081: LOC116451351
subclass of: SO_0000673
so part of: LOC116451351
location: join(27782..28473,34756..36693)
location: region:27782-36693:1
so has part: feature:27782-28473:1:exon
so has part: feature:34756-36693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27782-28473:1:exon

position:28473:1
position: 28473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34756-36693:1:exon

position:34756:1
position: 34756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451350
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451350
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(37474..48894)
location: region:37474-48894:-1
so has part: feature:37474-48894:-1:exon
subclass of: SO_0000011

116451350
type: Gene
SIO_000068: ncbigene

position:37474:-1
position: 37474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48894:-1
position: 48894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37474-48894:-1:exon

LOC116451350
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451350
product: uncharacterized LOC116451350, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XR_004243184.1
SIO_010081: LOC116451350
subclass of: SO_0000673
so part of: LOC116451350
location: complement(join(37474..38287,39836..39961,42917..43115,46956..47131,48174..48287,48614..48894))
location: region:37474-48894:-1
so has part: feature:48614-48894:-1:exon
so has part: feature:48174-48287:-1:exon
so has part: feature:46956-47131:-1:exon
so has part: feature:42917-43115:-1:exon
so has part: feature:39836-39961:-1:exon
so has part: feature:37474-38287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48614-48894:-1:exon

position:48614:-1
position: 48614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48174-48287:-1:exon

position:48174:-1
position: 48174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48287:-1
position: 48287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46956-47131:-1:exon

position:46956:-1
position: 46956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47131:-1
position: 47131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:42917-43115:-1:exon

position:42917:-1
position: 42917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43115:-1
position: 43115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39836-39961:-1:exon

position:39836:-1
position: 39836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39961:-1
position: 39961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:37474-38287:-1:exon

position:38287:-1
position: 38287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451350
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451350
product: uncharacterized LOC116451350, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XR_004243183.1
SIO_010081: LOC116451350
subclass of: SO_0000673
so part of: LOC116451350
location: complement(join(38950..39709,39836..39961,42917..43115,46956..47131,48174..48287,48614..48893))
location: region:38950-48893:-1
so has part: feature:48614-48893:-1:exon
so has part: feature:48174-48287:-1:exon
so has part: feature:46956-47131:-1:exon
so has part: feature:42917-43115:-1:exon
so has part: feature:39836-39961:-1:exon
so has part: feature:38950-39709:-1:exon

position:38950:-1
position: 38950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48893:-1
position: 48893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48614-48893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48174-48287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46956-47131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42917-43115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39836-39961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:38950-39709:-1:exon

position:39709:-1
position: 39709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EGR1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: EGR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(52378..55376)
location: region:52378-55376:-1
so has part: feature:52378-55376:-1:exon
subclass of: SO_0000010

116451559
type: Gene
SIO_000068: ncbigene

position:52378:-1
position: 52378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55376:-1
position: 55376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52378-55376:-1:exon

EGR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: EGR1
product: early growth response 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; deleted 9 bases in 9 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_032125158.1
SIO_010081: EGR1
subclass of: SO_0000673
so part of: EGR1
location: complement(join(52378..54693,55004..55376))
location: region:52378-55376:-1
so has part: feature:55004-55376:-1:exon
so has part: feature:52378-54693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55004-55376:-1:exon

position:55004:-1
position: 55004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52378-54693:-1:exon

position:54693:-1
position: 54693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EGR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: EGR1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; deleted 9 bases in 9 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: early growth response protein 1
translation: MAAAKAEMQLLPPLQISDPFGTFPHSPPAMDHHYPKLEEMMLLSGGGPQFLAPPGAPESAGFGAAGSPDEQHFEHLAADTFPEISLNSEKTLPETNYPTQTTRLPPITYTGRFSLEPAPNSSNPLWPEPLFGLVSGLVGMANAPPTSTXPTSSSPSSSSSQSSPLSCSVQASENNPIYSAAPTFPNPSSDIFPESQTQSFPNPSGAPIQYPPPAYPTAKTNFQVPMIPDYLFPQQQGELSLXSADQKPFPALETRAQQPSLTPLSTIKAFATQTGSQELKTLNTNYQSQLIKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRLCMRNFSRSDHLTTHIRTHTGXKPFACDICGRKFARXDERKRHTKIHLRQKDKKAEKXQAPVSTASSIPAYSSSVTTSYPSSIATTYPSPVRTAYSSPAPSSYPSPAHTHIPSPSIATTYPSGTATFQTQVATSFSSPGVANNFSSQVTSALFRHECGLSPRTIEIC
SIO_010081: EGR1
subclass of: SO_0000673
so part of: EGR1
location: complement(join(53386..54693,55004..55240))
location: region:53386-55240:-1
so has part: feature:55004-55240:-1:exon
so has part: feature:53386-54693:-1:exon

XP_031981049.1
type: Protein
SIO_000068: ncbiprotein

position:53386:-1
position: 53386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55240:-1
position: 55240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55004-55240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53386-54693:-1:exon

LOC116451561
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 59756..73529
location: region:59756-73529:1
so has part: feature:59756-73529:1:exon
subclass of: SO_0000011

116451561
type: Gene
SIO_000068: ncbigene

position:59756:1
position: 59756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73529:1
position: 73529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59756-73529:1:exon

LOC116451561
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451561
product: uncharacterized LOC116451561
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004243228.1
SIO_010081: LOC116451561
subclass of: SO_0000673
so part of: LOC116451561
location: join(59756..62442,70402..73529)
location: region:59756-73529:1
so has part: feature:59756-62442:1:exon
so has part: feature:70402-73529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59756-62442:1:exon

position:62442:1
position: 62442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70402-73529:1:exon

position:70402:1
position: 70402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

REEP2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(72600..92911)
location: region:72600-92911:-1
so has part: feature:72600-92911:-1:exon
subclass of: SO_0000010

116451560
type: Gene
SIO_000068: ncbigene

position:72600:-1
position: 72600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92911:-1
position: 92911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72600-92911:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: REEP2
product: receptor accessory protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032125160.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(72600..82139,84047..84204,84492..84639,85000..85113,85679..85799,86005..86073,87066..87142,92357..92429,92797..92911))
location: region:72600-92911:-1
so has part: feature:92797-92911:-1:exon
so has part: feature:92357-92429:-1:exon
so has part: feature:87066-87142:-1:exon
so has part: feature:86005-86073:-1:exon
so has part: feature:85679-85799:-1:exon
so has part: feature:85000-85113:-1:exon
so has part: feature:84492-84639:-1:exon
so has part: feature:84047-84204:-1:exon
so has part: feature:72600-82139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92797-92911:-1:exon

position:92797:-1
position: 92797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92357-92429:-1:exon

position:92357:-1
position: 92357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92429:-1
position: 92429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87066-87142:-1:exon

position:87066:-1
position: 87066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87142:-1
position: 87142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:86005-86073:-1:exon

position:86005:-1
position: 86005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86073:-1
position: 86073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:85679-85799:-1:exon

position:85679:-1
position: 85679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85799:-1
position: 85799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:85000-85113:-1:exon

position:85000:-1
position: 85000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85113:-1
position: 85113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:84492-84639:-1:exon

position:84492:-1
position: 84492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84639:-1
position: 84639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:84047-84204:-1:exon

position:84047:-1
position: 84047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84204:-1
position: 84204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:72600-82139:-1:exon

position:82139:-1
position: 82139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: REEP2
product: receptor accessory protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_032125163.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(72600..82139,84047..84204,84492..84639,85000..85113,85679..85799,87066..87142,92357..92429,92797..92909))
location: region:72600-92909:-1
so has part: feature:92797-92909:-1:exon
so has part: feature:92357-92429:-1:exon
so has part: feature:87066-87142:-1:exon
so has part: feature:85679-85799:-1:exon
so has part: feature:85000-85113:-1:exon
so has part: feature:84492-84639:-1:exon
so has part: feature:84047-84204:-1:exon
so has part: feature:72600-82139:-1:exon

position:92909:-1
position: 92909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92797-92909:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92357-92429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87066-87142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85679-85799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85000-85113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84492-84639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84047-84204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72600-82139:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: REEP2
product: receptor accessory protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032125162.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(72600..82139,84047..84204,84492..84639,85000..85113,85679..85799,86005..86073,87066..87142,89000..89057,92357..92429,92797..92809))
location: region:72600-92809:-1
so has part: feature:92797-92809:-1:exon
so has part: feature:92357-92429:-1:exon
so has part: feature:89000-89057:-1:exon
so has part: feature:87066-87142:-1:exon
so has part: feature:86005-86073:-1:exon
so has part: feature:85679-85799:-1:exon
so has part: feature:85000-85113:-1:exon
so has part: feature:84492-84639:-1:exon
so has part: feature:84047-84204:-1:exon
so has part: feature:72600-82139:-1:exon

position:92809:-1
position: 92809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92797-92809:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92357-92429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89000-89057:-1:exon

position:89000:-1
position: 89000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89057:-1
position: 89057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87066-87142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86005-86073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85679-85799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85000-85113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84492-84639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84047-84204:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:72600-82139:-1:exon

REEP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: REEP2
product: receptor accessory protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032125161.1
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(72600..82139,84047..84204,84492..84639,85000..85113,85679..85799,86005..86073,87066..87142,88985..89057,92357..92429,92797..92809))
location: region:72600-92809:-1
so has part: feature:92797-92809:-1:exon
so has part: feature:92357-92429:-1:exon
so has part: feature:88985-89057:-1:exon
so has part: feature:87066-87142:-1:exon
so has part: feature:86005-86073:-1:exon
so has part: feature:85679-85799:-1:exon
so has part: feature:85000-85113:-1:exon
so has part: feature:84492-84639:-1:exon
so has part: feature:84047-84204:-1:exon
so has part: feature:72600-82139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92797-92809:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92357-92429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88985-89057:-1:exon

position:88985:-1
position: 88985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87066-87142:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86005-86073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85679-85799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85000-85113:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84492-84639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84047-84204:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:72600-82139:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X4
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQACDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHMRSRDPQLHPSGASLLETIEDSASCYSSGEESSVAHRSNGTPSDTRTDPSDEDAGDKLPKRTQSLKTPKKVVKAELPIRSVKARPKKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(82065..82139,84047..84204,84492..84639,85000..85113,85679..85799,87066..87142,92357..92429,92797..92828))
location: region:82065-92828:-1
so has part: feature:92797-92828:-1:exon
so has part: feature:92357-92429:-1:exon
so has part: feature:87066-87142:-1:exon
so has part: feature:85679-85799:-1:exon
so has part: feature:85000-85113:-1:exon
so has part: feature:84492-84639:-1:exon
so has part: feature:84047-84204:-1:exon
so has part: feature:82065-82139:-1:exon

XP_031981054.1
type: Protein
SIO_000068: ncbiprotein

position:82065:-1
position: 82065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92828:-1
position: 92828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92797-92828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92357-92429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87066-87142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85679-85799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85000-85113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84492-84639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84047-84204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82065-82139:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X1
translation: MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYEVFMAMDEKLNDTRRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQACDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHMRSRDPQLHPSGASLLETIEDSASCYSSGEESSVAHRSNGTPSDTRTDPSDEDAGDKLPKRTQSLKTPKKVVKAELPIRSVKARPKKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(82065..82139,84047..84204,84492..84639,85000..85113,85679..85799,86005..86073,87066..87142,92357..92429,92797..92828))
location: region:82065-92828:-1
so has part: feature:92797-92828:-1:exon
so has part: feature:92357-92429:-1:exon
so has part: feature:87066-87142:-1:exon
so has part: feature:86005-86073:-1:exon
so has part: feature:85679-85799:-1:exon
so has part: feature:85000-85113:-1:exon
so has part: feature:84492-84639:-1:exon
so has part: feature:84047-84204:-1:exon
so has part: feature:82065-82139:-1:exon

XP_031981051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92797-92828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92357-92429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87066-87142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86005-86073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85679-85799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85000-85113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84492-84639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84047-84204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:82065-82139:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X3
translation: MKMSSTDLNTDSCGIPLVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYEVFMAMDEKLNDTRRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQACDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHMRSRDPQLHPSGASLLETIEDSASCYSSGEESSVAHRSNGTPSDTRTDPSDEDAGDKLPKRTQSLKTPKKVVKAELPIRSVKARPKKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(82065..82139,84047..84204,84492..84639,85000..85113,85679..85799,86005..86073,87066..87142,89000..89050))
location: region:82065-89050:-1
so has part: feature:89000-89050:-1:exon
so has part: feature:87066-87142:-1:exon
so has part: feature:86005-86073:-1:exon
so has part: feature:85679-85799:-1:exon
so has part: feature:85000-85113:-1:exon
so has part: feature:84492-84639:-1:exon
so has part: feature:84047-84204:-1:exon
so has part: feature:82065-82139:-1:exon

XP_031981053.1
type: Protein
SIO_000068: ncbiprotein

position:89050:-1
position: 89050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89000-89050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87066-87142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86005-86073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85679-85799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85000-85113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84492-84639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84047-84204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82065-82139:-1:exon

REEP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: REEP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor expression-enhancing protein 2 isoform X2
translation: MKMSSTDLNTDSCGIPLVTFLIVKWMMYWIVFAFFTTAETLTDIVLSWAERCPVYEVFMAMDEKLNDTRRRFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQACDKSYETMMRVGKRGLNLAANAAVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDTVHMRSRDPQLHPSGASLLETIEDSASCYSSGEESSVAHRSNGTPSDTRTDPSDEDAGDKLPKRTQSLKTPKKVVKAELPIRSVKARPKKKAAGSLASGESS
SIO_010081: REEP2
subclass of: SO_0000673
so part of: REEP2
location: complement(join(82065..82139,84047..84204,84492..84639,85000..85113,85679..85799,86005..86073,87066..87142,88985..89050))
location: region:82065-89050:-1
so has part: feature:88985-89050:-1:exon
so has part: feature:87066-87142:-1:exon
so has part: feature:86005-86073:-1:exon
so has part: feature:85679-85799:-1:exon
so has part: feature:85000-85113:-1:exon
so has part: feature:84492-84639:-1:exon
so has part: feature:84047-84204:-1:exon
so has part: feature:82065-82139:-1:exon

XP_031981052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88985-89050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87066-87142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86005-86073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:85679-85799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85000-85113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84492-84639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84047-84204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82065-82139:-1:exon

KDM3B
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: KDM3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99529..150190)
location: region:99529-150190:-1
so has part: feature:99529-150190:-1:exon
subclass of: SO_0000010

116451667
type: Gene
SIO_000068: ncbigene

position:99529:-1
position: 99529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150190:-1
position: 150190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99529-150190:-1:exon

KDM3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: KDM3B
product: lysine demethylase 3B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_032125326.1
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(99529..100876,102876..103010,103602..103778,104112..104251,104754..104873,108026..108156,108243..108333,111921..112092,119902..120168,123725..123981,124849..125125,125794..125921,127389..127496,128477..128629,129691..129905,131245..131446,131766..133050,135449..136030,136950..137018,137741..137865,139328..139433,139879..139992,142412..142579,149949..150188))
location: region:99529-150188:-1
so has part: feature:149949-150188:-1:exon
so has part: feature:142412-142579:-1:exon
so has part: feature:139879-139992:-1:exon
so has part: feature:139328-139433:-1:exon
so has part: feature:137741-137865:-1:exon
so has part: feature:136950-137018:-1:exon
so has part: feature:135449-136030:-1:exon
so has part: feature:131766-133050:-1:exon
so has part: feature:131245-131446:-1:exon
so has part: feature:129691-129905:-1:exon
so has part: feature:128477-128629:-1:exon
so has part: feature:127389-127496:-1:exon
so has part: feature:125794-125921:-1:exon
so has part: feature:124849-125125:-1:exon
so has part: feature:123725-123981:-1:exon
so has part: feature:119902-120168:-1:exon
so has part: feature:111921-112092:-1:exon
so has part: feature:108243-108333:-1:exon
so has part: feature:108026-108156:-1:exon
so has part: feature:104754-104873:-1:exon
so has part: feature:104112-104251:-1:exon
so has part: feature:103602-103778:-1:exon
so has part: feature:102876-103010:-1:exon
so has part: feature:99529-100876:-1:exon

position:150188:-1
position: 150188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149949-150188:-1:exon

position:149949:-1
position: 149949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:142412-142579:-1:exon

position:142412:-1
position: 142412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142579:-1
position: 142579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:139879-139992:-1:exon

position:139879:-1
position: 139879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139992:-1
position: 139992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:139328-139433:-1:exon

position:139328:-1
position: 139328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139433:-1
position: 139433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:137741-137865:-1:exon

position:137741:-1
position: 137741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137865:-1
position: 137865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:136950-137018:-1:exon

position:136950:-1
position: 136950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137018:-1
position: 137018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:135449-136030:-1:exon

position:135449:-1
position: 135449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136030:-1
position: 136030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:131766-133050:-1:exon

position:131766:-1
position: 131766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133050:-1
position: 133050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:131245-131446:-1:exon

position:131245:-1
position: 131245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131446:-1
position: 131446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:129691-129905:-1:exon

position:129691:-1
position: 129691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129905:-1
position: 129905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:128477-128629:-1:exon

position:128477:-1
position: 128477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128629:-1
position: 128629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:127389-127496:-1:exon

position:127389:-1
position: 127389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127496:-1
position: 127496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:125794-125921:-1:exon

position:125794:-1
position: 125794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125921:-1
position: 125921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:124849-125125:-1:exon

position:124849:-1
position: 124849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125125:-1
position: 125125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:123725-123981:-1:exon

position:123725:-1
position: 123725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123981:-1
position: 123981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:119902-120168:-1:exon

position:119902:-1
position: 119902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120168:-1
position: 120168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:111921-112092:-1:exon

position:111921:-1
position: 111921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112092:-1
position: 112092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:108243-108333:-1:exon

position:108243:-1
position: 108243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108333:-1
position: 108333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:108026-108156:-1:exon

position:108026:-1
position: 108026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108156:-1
position: 108156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:104754-104873:-1:exon

position:104754:-1
position: 104754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104873:-1
position: 104873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:104112-104251:-1:exon

position:104112:-1
position: 104112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104251:-1
position: 104251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:103602-103778:-1:exon

position:103602:-1
position: 103602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103778:-1
position: 103778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:102876-103010:-1:exon

position:102876:-1
position: 102876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103010:-1
position: 103010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:99529-100876:-1:exon

position:100876:-1
position: 100876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KDM3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: KDM3B
product: lysine demethylase 3B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 36 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_032125327.1
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(99529..100876,102876..103010,103602..103778,104112..104251,104754..104873,108026..108156,108243..108333,111921..112092,119902..120168,123725..123981,124849..125125,125794..125921,127389..127496,128477..128629,129691..129905,131245..131446,131808..133050,135449..136030,136950..137018,137741..137865,139328..139433,139879..139992,142412..142579,149949..150119))
location: region:99529-150119:-1
so has part: feature:149949-150119:-1:exon
so has part: feature:142412-142579:-1:exon
so has part: feature:139879-139992:-1:exon
so has part: feature:139328-139433:-1:exon
so has part: feature:137741-137865:-1:exon
so has part: feature:136950-137018:-1:exon
so has part: feature:135449-136030:-1:exon
so has part: feature:131808-133050:-1:exon
so has part: feature:131245-131446:-1:exon
so has part: feature:129691-129905:-1:exon
so has part: feature:128477-128629:-1:exon
so has part: feature:127389-127496:-1:exon
so has part: feature:125794-125921:-1:exon
so has part: feature:124849-125125:-1:exon
so has part: feature:123725-123981:-1:exon
so has part: feature:119902-120168:-1:exon
so has part: feature:111921-112092:-1:exon
so has part: feature:108243-108333:-1:exon
so has part: feature:108026-108156:-1:exon
so has part: feature:104754-104873:-1:exon
so has part: feature:104112-104251:-1:exon
so has part: feature:103602-103778:-1:exon
so has part: feature:102876-103010:-1:exon
so has part: feature:99529-100876:-1:exon

position:150119:-1
position: 150119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149949-150119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142412-142579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139879-139992:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139328-139433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137741-137865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136950-137018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135449-136030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131808-133050:-1:exon

position:131808:-1
position: 131808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:131245-131446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129691-129905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128477-128629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:127389-127496:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:125794-125921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:124849-125125:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:123725-123981:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:119902-120168:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111921-112092:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:108243-108333:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:108026-108156:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:104754-104873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:104112-104251:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:103602-103778:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:102876-103010:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:99529-100876:-1:exon

KDM3B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: KDM3B
product: lysine demethylase 3B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XR_004243279.1
SIO_010081: KDM3B
so part of: KDM3B
location: complement(join(100774..100876,102876..103010,103602..103778,104112..104251,104754..104873,108026..108156,108243..108333,119902..120168,123725..123981,124849..125125,125794..125921,127389..127496,128477..128629,129691..129905,131245..131446,131766..133050,135449..136030,136950..137018,137741..137865,139328..139433,139879..139992,142412..142579,149949..150190))
location: region:100774-150190:-1
so has part: feature:149949-150190:-1:exon
so has part: feature:142412-142579:-1:exon
so has part: feature:139879-139992:-1:exon
so has part: feature:139328-139433:-1:exon
so has part: feature:137741-137865:-1:exon
so has part: feature:136950-137018:-1:exon
so has part: feature:135449-136030:-1:exon
so has part: feature:131766-133050:-1:exon
so has part: feature:131245-131446:-1:exon
so has part: feature:129691-129905:-1:exon
so has part: feature:128477-128629:-1:exon
so has part: feature:127389-127496:-1:exon
so has part: feature:125794-125921:-1:exon
so has part: feature:124849-125125:-1:exon
so has part: feature:123725-123981:-1:exon
so has part: feature:119902-120168:-1:exon
so has part: feature:108243-108333:-1:exon
so has part: feature:108026-108156:-1:exon
so has part: feature:104754-104873:-1:exon
so has part: feature:104112-104251:-1:exon
so has part: feature:103602-103778:-1:exon
so has part: feature:102876-103010:-1:exon
so has part: feature:100774-100876:-1:exon

position:100774:-1
position: 100774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149949-150190:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142412-142579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139879-139992:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139328-139433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137741-137865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136950-137018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135449-136030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131766-133050:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131245-131446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129691-129905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128477-128629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:127389-127496:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:125794-125921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:124849-125125:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:123725-123981:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:119902-120168:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:108243-108333:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:108026-108156:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:104754-104873:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:104112-104251:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:103602-103778:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:102876-103010:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:100774-100876:-1:exon

KDM3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: KDM3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 3B isoform X2
translation: MADAAASPVGKRLLLLLAAGPGEGETAGSEPGPALPSRAWRSGTVRAMSGAVPQDLAIFVEFDGCNWNQHAWVKVHAEEVIVLLLEGSLVWAPRNDPVMLQGTRISQAQWPALTFTPLVDKLGLGSVVPVEFLLDRHLRFLSDASGLRLFQMATESQNQILQEQPSLRESVNALISDQKLQEIFSRGPYSVQGQRVKVYQPEDENSWLCGVVSHQDPITRLMEVSVTESGEIKSVDPRLIHVVMDNTSPSEGGGLKAAKSSTKGKKKKESLEGKDGRRRKNVSDPGCDPATKKLKERSEADSNGSDGGEASRGPWKGVSSSETGLDPRAKQLPSFIPQINRNIRFATYTKENGRTLVVQDEPVGGDTPLPFTPFSSVTGQPLLVGSGCKEAGKSLEQVGQGTVTSTTAVTTPALTPTTVRISDTSLPAVTGQEKLKAVRSQAQGENSRNSLLTSSGFGVSLPSASQSLVFGAGRSQSNGVMAPESKPSGFPFGCGTGQEAQKDSDSSKNLFFQCMSQNLPSSNYFTVISESLTEDVSSRDSFKQCTESVGAGTCKGKVISVDTKPGAQSGSSVEQKLPVESMPTLTPAFSRSLLNTRPPDSHENLFLQPPKLSREEPSNPFLAFAEKAELSPFSGFASSSQTGVCAPSTPVGHKATSGWPETLTSTDSLAKKKTLFITTDSSKMISSASGSTAAAGVQSPSTVGNGRSSSPTSNLTQPIEMPTLSSSPTEEKPAVGPGQQDNPLLKTFSNMFGRHPPTLFSSHVEFPQENKAPFEAVKRFSLDERSLTSKQDSDSSTNSDLSDLSDSEDQLQAKACMKGIPDHLMAKLGPNAERNAELLLGKGKGKQAPKGRPRTAPLKVGQSVLKDMSKVRKLKQSGEPFLQDGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLVFTRKGILRVEGFLNPQQSDPDAMSLWIPSSSPAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKNRPRSETEEIGDEEVFSWLKCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCINRQNKSVLRPAVTNGISQLPTVNPSASVSGNESTFSTGAGAAAVGQVEMDTVPKSEATDSRIEDSAKMETLPTNNTEVKTNRPLCPETAPSSALHWLADLATQKAKEETKESGSLRSVLNKESHSPFGLDSFNSSTKVSPLTPKLFNSLLLGPVTSSNKAEGSSLRDLLHTGPGKLPQVPSDTGIPFPPVFSAASTGAKGKASLPNFLDHIIASVVENKKTSDAAKRASNLADTQREVKEMVMGLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSLEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIISKRLRSDDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGTHDDEVLKTIDEGDADDVTKQRIHEGREKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHESKLARS
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(100796..100876,102876..103010,103602..103778,104112..104251,104754..104873,108026..108156,108243..108333,111921..112092,119902..120168,123725..123981,124849..125125,125794..125921,127389..127496,128477..128629,129691..129905,131245..131446,131808..133050,135449..136030,136950..137018,137741..137865,139328..139433,139879..139992,142412..142579,149949..150119))
location: region:100796-150119:-1
so has part: feature:149949-150119:-1:exon
so has part: feature:142412-142579:-1:exon
so has part: feature:139879-139992:-1:exon
so has part: feature:139328-139433:-1:exon
so has part: feature:137741-137865:-1:exon
so has part: feature:136950-137018:-1:exon
so has part: feature:135449-136030:-1:exon
so has part: feature:131808-133050:-1:exon
so has part: feature:131245-131446:-1:exon
so has part: feature:129691-129905:-1:exon
so has part: feature:128477-128629:-1:exon
so has part: feature:127389-127496:-1:exon
so has part: feature:125794-125921:-1:exon
so has part: feature:124849-125125:-1:exon
so has part: feature:123725-123981:-1:exon
so has part: feature:119902-120168:-1:exon
so has part: feature:111921-112092:-1:exon
so has part: feature:108243-108333:-1:exon
so has part: feature:108026-108156:-1:exon
so has part: feature:104754-104873:-1:exon
so has part: feature:104112-104251:-1:exon
so has part: feature:103602-103778:-1:exon
so has part: feature:102876-103010:-1:exon
so has part: feature:100796-100876:-1:exon

XP_031981218.1
type: Protein
SIO_000068: ncbiprotein

position:100796:-1
position: 100796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149949-150119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142412-142579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139879-139992:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139328-139433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137741-137865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136950-137018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135449-136030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131808-133050:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131245-131446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129691-129905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128477-128629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:127389-127496:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:125794-125921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:124849-125125:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:123725-123981:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:119902-120168:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111921-112092:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:108243-108333:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:108026-108156:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:104754-104873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:104112-104251:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:103602-103778:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:102876-103010:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:100796-100876:-1:exon

KDM3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: KDM3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 3B isoform X1
translation: MADAAASPVGKRLLLLLAAGPGEGETAGSEPGPALPSRAWRSGTVRAMSGAVPQDLAIFVEFDGCNWNQHAWVKVHAEEVIVLLLEGSLVWAPRNDPVMLQGTRISQAQWPALTFTPLVDKLGLGSVVPVEFLLDRHLRFLSDASGLRLFQMATESQNQILQEQPSLRESVNALISDQKLQEIFSRGPYSVQGQRVKVYQPEDENSWLCGVVSHQDPITRLMEVSVTESGEIKSVDPRLIHVVMDNTSPSEGGGLKAAKSSTKGKKKKESLEGKDGRRRKNVSDPGCDPATKKLKERSEADSNGSDGGEASRGPWKGVSSSETGLDPRAKQLPSFIPQINRNIRFATYTKENGRTLVVQDEPVGGDTPLPFTPFSSVTGQPLLVGSGCKEAGKSLEQVGQGTVTSTTAVTTPALTPTTVRISDTSLPAVTGQEKLKAVRSQAQGENSRNSLLTSSGFGVSLPSASQSLVFGAGRSQSNGVMAPESKPSGFPFGCGTGQEAQKDSDSSKNLFFQCMSQNLPSSNYFTVISESLTEDVSSRDSFKQCTESVGAGTCKGKVISVDTKPGAQSGSSVEQKLPVESMPTLTPAFSRSLLNTRPPDSHENLFLQPPKLSREEPSNPFLAFAEKAELSPFSGFASSSQTGVCAPSTPVGHKATSGWPETLTSTDSLAKKKTLFITTDSSKMISSASGSTAAAGVQSPSTVGNGRSSSPTSNLTQPIEMPTLSSSPTEEKPAVGPGQQDNPLLKTFSNMFGRHPPTLFSSHVEFPQENKAPFEAVKRFSLDERSLTSKQDSDSSTNSDLSDLSDSEDQLQAKACMKGIPDHLMAKLGPNAERNAELLLGKGKGKQAPKGRPRTAPLKGDDLNADNVLEAQRVGQSVLKDMSKVRKLKQSGEPFLQDGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLVFTRKGILRVEGFLNPQQSDPDAMSLWIPSSSPAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKNRPRSETEEIGDEEVFSWLKCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCINRQNKSVLRPAVTNGISQLPTVNPSASVSGNESTFSTGAGAAAVGQVEMDTVPKSEATDSRIEDSAKMETLPTNNTEVKTNRPLCPETAPSSALHWLADLATQKAKEETKESGSLRSVLNKESHSPFGLDSFNSSTKVSPLTPKLFNSLLLGPVTSSNKAEGSSLRDLLHTGPGKLPQVPSDTGIPFPPVFSAASTGAKGKASLPNFLDHIIASVVENKKTSDAAKRASNLADTQREVKEMVMGLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSLEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIISKRLRSDDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGTHDDEVLKTIDEGDADDVTKQRIHEGREKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYDEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHESKLARS
SIO_010081: KDM3B
subclass of: SO_0000673
so part of: KDM3B
location: complement(join(100796..100876,102876..103010,103602..103778,104112..104251,104754..104873,108026..108156,108243..108333,111921..112092,119902..120168,123725..123981,124849..125125,125794..125921,127389..127496,128477..128629,129691..129905,131245..131446,131766..133050,135449..136030,136950..137018,137741..137865,139328..139433,139879..139992,142412..142579,149949..150119))
location: region:100796-150119:-1
so has part: feature:149949-150119:-1:exon
so has part: feature:142412-142579:-1:exon
so has part: feature:139879-139992:-1:exon
so has part: feature:139328-139433:-1:exon
so has part: feature:137741-137865:-1:exon
so has part: feature:136950-137018:-1:exon
so has part: feature:135449-136030:-1:exon
so has part: feature:131766-133050:-1:exon
so has part: feature:131245-131446:-1:exon
so has part: feature:129691-129905:-1:exon
so has part: feature:128477-128629:-1:exon
so has part: feature:127389-127496:-1:exon
so has part: feature:125794-125921:-1:exon
so has part: feature:124849-125125:-1:exon
so has part: feature:123725-123981:-1:exon
so has part: feature:119902-120168:-1:exon
so has part: feature:111921-112092:-1:exon
so has part: feature:108243-108333:-1:exon
so has part: feature:108026-108156:-1:exon
so has part: feature:104754-104873:-1:exon
so has part: feature:104112-104251:-1:exon
so has part: feature:103602-103778:-1:exon
so has part: feature:102876-103010:-1:exon
so has part: feature:100796-100876:-1:exon

XP_031981217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149949-150119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142412-142579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:139879-139992:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139328-139433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:137741-137865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136950-137018:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:135449-136030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:131766-133050:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131245-131446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129691-129905:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128477-128629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:127389-127496:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:125794-125921:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:124849-125125:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:123725-123981:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:119902-120168:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:111921-112092:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:108243-108333:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:108026-108156:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:104754-104873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:104112-104251:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:103602-103778:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:102876-103010:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:100796-100876:-1:exon

LOC116451669
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(152148..163405)
location: region:152148-163405:-1
so has part: feature:152148-163405:-1:exon
subclass of: SO_0000010

116451669
type: Gene
SIO_000068: ncbigene

position:152148:-1
position: 152148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163405:-1
position: 163405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152148-163405:-1:exon

LOC116451669
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116451669
product: C-terminal-binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032125328.1
SIO_010081: LOC116451669
subclass of: SO_0000673
so part of: LOC116451669
location: complement(join(152148..155815,156856..156976,157523..157650,157934..158064,158850..159064,159673..159879,162345..162489,162581..162735,163324..163405))
location: region:152148-163405:-1
so has part: feature:163324-163405:-1:exon
so has part: feature:162581-162735:-1:exon
so has part: feature:162345-162489:-1:exon
so has part: feature:159673-159879:-1:exon
so has part: feature:158850-159064:-1:exon
so has part: feature:157934-158064:-1:exon
so has part: feature:157523-157650:-1:exon
so has part: feature:156856-156976:-1:exon
so has part: feature:152148-155815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163324-163405:-1:exon

position:163324:-1
position: 163324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:162581-162735:-1:exon

position:162581:-1
position: 162581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162735:-1
position: 162735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:162345-162489:-1:exon

position:162345:-1
position: 162345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162489:-1
position: 162489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:159673-159879:-1:exon

position:159673:-1
position: 159673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159879:-1
position: 159879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158850-159064:-1:exon

position:158850:-1
position: 158850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159064:-1
position: 159064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:157934-158064:-1:exon

position:157934:-1
position: 157934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158064:-1
position: 158064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:157523-157650:-1:exon

position:157523:-1
position: 157523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157650:-1
position: 157650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:156856-156976:-1:exon

position:156856:-1
position: 156856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156976:-1
position: 156976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:152148-155815:-1:exon

position:155815:-1
position: 155815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451669
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116451669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-terminal-binding protein 2
translation: MDRHKVKRQRLDRICEGIRPPIVNGPMPARPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLSRQDLEKFKALRVIVRIGSGYDNVDIKSAAELGIAVCNIPSSSVEETADSTLCHILNLYRRVTWLHQALREGNRASSVEQIREVAGGAVRIRGETLGIIGLGRVGQAVALRAKSFGFNVIFYDPYLPDGVERSLGLQRVGTLQDLLMHSDCITLHCSLNEHNHHLINDFTIKQMRQGCFLVNTARGGLVDEKALAQALKEGRIRGTALDVHESEPFSFTQGPLKDAPNVICTPHTAWYSEQASIESREDAAKEIRRAITGHIPDALRNCVNKEYLLLAAQWSNIDPATVHPELNGAAAYRFPPGVVGVANPGLPEPPVVEGIVAHGIPPVSHSAPRTPSPGETSKLDADREIPADQ
SIO_010081: LOC116451669
subclass of: SO_0000673
so part of: LOC116451669
location: complement(join(155644..155815,156856..156976,157523..157650,157934..158064,158850..159064,159673..159879,162345..162489,162581..162735,163324..163372))
location: region:155644-163372:-1
so has part: feature:163324-163372:-1:exon
so has part: feature:162581-162735:-1:exon
so has part: feature:162345-162489:-1:exon
so has part: feature:159673-159879:-1:exon
so has part: feature:158850-159064:-1:exon
so has part: feature:157934-158064:-1:exon
so has part: feature:157523-157650:-1:exon
so has part: feature:156856-156976:-1:exon
so has part: feature:155644-155815:-1:exon

XP_031981219.1
type: Protein
SIO_000068: ncbiprotein

position:155644:-1
position: 155644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163372:-1
position: 163372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163324-163372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162581-162735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:162345-162489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159673-159879:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158850-159064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:157934-158064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:157523-157650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156856-156976:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155644-155815:-1:exon

LOC116451670
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 163434..164084
location: region:163434-164084:1
so has part: feature:163434-164084:1:exon
subclass of: SO_0000011

116451670
type: Gene
SIO_000068: ncbigene

position:163434:1
position: 163434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164084:1
position: 164084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163434-164084:1:exon

LOC116451670
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451670
product: uncharacterized LOC116451670
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XR_004243280.1
SIO_010081: LOC116451670
subclass of: SO_0000673
so part of: LOC116451670
location: join(163434..163524,163795..164084)
location: region:163434-164084:1
so has part: feature:163434-163524:1:exon
so has part: feature:163795-164084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163434-163524:1:exon

position:163524:1
position: 163524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:163795-164084:1:exon

position:163795:1
position: 163795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFRA3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: GFRA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 169630..178422
location: region:169630-178422:1
so has part: feature:169630-178422:1:exon
subclass of: SO_0000010

116451687
type: Gene
SIO_000068: ncbigene

position:169630:1
position: 169630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178422:1
position: 178422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169630-178422:1:exon

GFRA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: GFRA3
product: GDNF family receptor alpha 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_032125357.1
SIO_010081: GFRA3
subclass of: SO_0000673
so part of: GFRA3
location: join(169630..169747,173195..173470,174165..174257,174682..175027,175101..175210,176290..176424,177395..177525,177826..178422)
location: region:169630-178422:1
so has part: feature:169630-169747:1:exon
so has part: feature:173195-173470:1:exon
so has part: feature:174165-174257:1:exon
so has part: feature:174682-175027:1:exon
so has part: feature:175101-175210:1:exon
so has part: feature:176290-176424:1:exon
so has part: feature:177395-177525:1:exon
so has part: feature:177826-178422:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169630-169747:1:exon

position:169747:1
position: 169747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173195-173470:1:exon

position:173195:1
position: 173195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173470:1
position: 173470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:174165-174257:1:exon

position:174165:1
position: 174165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174257:1
position: 174257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:174682-175027:1:exon

position:174682:1
position: 174682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175027:1
position: 175027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:175101-175210:1:exon

position:175101:1
position: 175101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175210:1
position: 175210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:176290-176424:1:exon

position:176290:1
position: 176290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176424:1
position: 176424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:177395-177525:1:exon

position:177395:1
position: 177395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177525:1
position: 177525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:177826-178422:1:exon

position:177826:1
position: 177826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFRA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: GFRA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDNF family receptor alpha-3
translation: MGPALLLGLLLSRAGDLMALPSSDCVVAEQLCLSDSTCNATYRTLENCALAKTRLLSLDHDSRVRCLNAELDLGNSSLLHCKCHRRMKKQEHCLRIFWTVHSSMTDGYFNLETSPYENPANEEHWKTDYNKLAALVSGSQLAGDATNSCLKATHVCNLSKKCFRLRTDYASICTKGAGSEDVCDRRKCHRGLRNFFEKVPEDFTKRILFCPCQDEFCGERRRKTIVPDCSFQYNTKPNCLWLLDSCLEDHICKSRLADFQQNCQPVDMSPDGCSLHNHAACLQAYMGMIGTPMTPNYVSNSSVEVSLWCTCENSGNQKEKCDQILGMFESNKCLENTIWSQMHLKQTALERQEDLLYSSSLSFQGDSASTSLSSDTSQVAEGKKERDSSVQSSMPIASSVYSGATTSWPSLALFLPLLLSPH
SIO_010081: GFRA3
subclass of: SO_0000673
so part of: GFRA3
location: join(169705..169747,173195..173470,174165..174257,174682..175027,175101..175210,176290..176424,177395..177525,177826..177960)
location: region:169705-177960:1
so has part: feature:169705-169747:1:exon
so has part: feature:173195-173470:1:exon
so has part: feature:174165-174257:1:exon
so has part: feature:174682-175027:1:exon
so has part: feature:175101-175210:1:exon
so has part: feature:176290-176424:1:exon
so has part: feature:177395-177525:1:exon
so has part: feature:177826-177960:1:exon

XP_031981248.1
type: Protein
SIO_000068: ncbiprotein

position:169705:1
position: 169705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177960:1
position: 177960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169705-169747:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173195-173470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174165-174257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174682-175027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:175101-175210:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:176290-176424:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:177395-177525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:177826-177960:1:exon

CDC23
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: CDC23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 200844..209816
location: region:200844-209816:1
so has part: feature:200844-209816:1:exon
subclass of: SO_0000010

116451570
type: Gene
SIO_000068: ncbigene

position:200844:1
position: 200844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209816:1
position: 209816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200844-209816:1:exon

CDC23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CDC23
product: cell division cycle 23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 136 samples with support for all annotated introns
transcript id: XM_032125171.1
SIO_010081: CDC23
subclass of: SO_0000673
so part of: CDC23
location: join(200844..200996,201483..201555,202446..202583,202846..202888,203249..203354,203440..203572,204532..204709,204799..204896,205118..205199,205775..205928,206064..206183,206544..206619,206896..206957,207818..207896,207996..208115,208990..209816)
location: region:200844-209816:1
so has part: feature:200844-200996:1:exon
so has part: feature:201483-201555:1:exon
so has part: feature:202446-202583:1:exon
so has part: feature:202846-202888:1:exon
so has part: feature:203249-203354:1:exon
so has part: feature:203440-203572:1:exon
so has part: feature:204532-204709:1:exon
so has part: feature:204799-204896:1:exon
so has part: feature:205118-205199:1:exon
so has part: feature:205775-205928:1:exon
so has part: feature:206064-206183:1:exon
so has part: feature:206544-206619:1:exon
so has part: feature:206896-206957:1:exon
so has part: feature:207818-207896:1:exon
so has part: feature:207996-208115:1:exon
so has part: feature:208990-209816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200844-200996:1:exon

position:200996:1
position: 200996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201483-201555:1:exon

position:201483:1
position: 201483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201555:1
position: 201555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202446-202583:1:exon

position:202446:1
position: 202446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202583:1
position: 202583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202846-202888:1:exon

position:202846:1
position: 202846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202888:1
position: 202888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:203249-203354:1:exon

position:203249:1
position: 203249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203354:1
position: 203354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:203440-203572:1:exon

position:203440:1
position: 203440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203572:1
position: 203572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:204532-204709:1:exon

position:204532:1
position: 204532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204709:1
position: 204709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:204799-204896:1:exon

position:204799:1
position: 204799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204896:1
position: 204896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:205118-205199:1:exon

position:205118:1
position: 205118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205199:1
position: 205199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:205775-205928:1:exon

position:205775:1
position: 205775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205928:1
position: 205928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:206064-206183:1:exon

position:206064:1
position: 206064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206183:1
position: 206183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:206544-206619:1:exon

position:206544:1
position: 206544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206619:1
position: 206619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:206896-206957:1:exon

position:206896:1
position: 206896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206957:1
position: 206957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:207818-207896:1:exon

position:207818:1
position: 207818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207896:1
position: 207896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:207996-208115:1:exon

position:207996:1
position: 207996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208115:1
position: 208115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:208990-209816:1:exon

position:208990:1
position: 208990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CDC23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 23 homolog
translation: MAAAAAMVAAAGGGDFSDLREIKKQLLSVAERSRERGLQHSGKWAAELAFALEPLPLSELPPPPVLTEEDARDLDAYTLAKSYFDLKEYDRAAYFLRGCKSQKAYFLYMYSRYLSGEKKKDDETVDSLGPLEKGQVKNEALRELRVELSKKHKAQELDGFGLYLYGVVLRKLDLVKEAIDVFVEAAHVLPLHWGAWLELCNLITDKEMLKFLSLPDTWMKEFFLAHIYTELQLIEEALQKYQSLIDAGFSKSTYIISQIAVAYHNIRDIDKALSIFNELRKQDPYRIENMDTFSNLLYVRSMKPELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVEKMALVKLAKLHEQLNESEQAAQCYIKYIQDIYSCGEVVEHLEVSTAFRYLAQYYFKCKLWDEASACAQKCCAFNDTREEGKALLRQILQLRNQGETSSTDVAAPFFLPASLSANNTPTRRVSPLNLSSVTP
SIO_010081: CDC23
subclass of: SO_0000673
so part of: CDC23
location: join(200866..200996,201483..201555,202446..202583,202846..202888,203249..203354,203440..203572,204532..204709,204799..204896,205118..205199,205775..205928,206064..206183,206544..206619,206896..206957,207818..207896,207996..208115,208990..209160)
location: region:200866-209160:1
so has part: feature:200866-200996:1:exon
so has part: feature:201483-201555:1:exon
so has part: feature:202446-202583:1:exon
so has part: feature:202846-202888:1:exon
so has part: feature:203249-203354:1:exon
so has part: feature:203440-203572:1:exon
so has part: feature:204532-204709:1:exon
so has part: feature:204799-204896:1:exon
so has part: feature:205118-205199:1:exon
so has part: feature:205775-205928:1:exon
so has part: feature:206064-206183:1:exon
so has part: feature:206544-206619:1:exon
so has part: feature:206896-206957:1:exon
so has part: feature:207818-207896:1:exon
so has part: feature:207996-208115:1:exon
so has part: feature:208990-209160:1:exon

XP_031981062.1
type: Protein
SIO_000068: ncbiprotein

position:200866:1
position: 200866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209160:1
position: 209160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200866-200996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201483-201555:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202446-202583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202846-202888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203249-203354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203440-203572:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204532-204709:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204799-204896:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:205118-205199:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205775-205928:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206064-206183:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206544-206619:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:206896-206957:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:207818-207896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:207996-208115:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208990-209160:1:exon

JAKMIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: JAKMIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 210905..257241
location: region:210905-257241:1
so has part: feature:210905-257241:1:exon
subclass of: SO_0000010

116451382
type: Gene
SIO_000068: ncbigene

position:210905:1
position: 210905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257241:1
position: 257241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210905-257241:1:exon

JAKMIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: JAKMIP2
product: janus kinase and microtubule interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032124757.1
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(210905..211048,226302..226567,227147..227644,228901..229110,230051..230149,230830..230976,232738..232878,233771..233827,235631..235750,237236..237364,238360..238443,238747..238809,238978..239076,240443..240541,240864..240917,241673..241738,242576..242644,243642..243719,244343..244546,246487..246552,247215..247287,251588..257241)
location: region:210905-257241:1
so has part: feature:210905-211048:1:exon
so has part: feature:226302-226567:1:exon
so has part: feature:227147-227644:1:exon
so has part: feature:228901-229110:1:exon
so has part: feature:230051-230149:1:exon
so has part: feature:230830-230976:1:exon
so has part: feature:232738-232878:1:exon
so has part: feature:233771-233827:1:exon
so has part: feature:235631-235750:1:exon
so has part: feature:237236-237364:1:exon
so has part: feature:238360-238443:1:exon
so has part: feature:238747-238809:1:exon
so has part: feature:238978-239076:1:exon
so has part: feature:240443-240541:1:exon
so has part: feature:240864-240917:1:exon
so has part: feature:241673-241738:1:exon
so has part: feature:242576-242644:1:exon
so has part: feature:243642-243719:1:exon
so has part: feature:244343-244546:1:exon
so has part: feature:246487-246552:1:exon
so has part: feature:247215-247287:1:exon
so has part: feature:251588-257241:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210905-211048:1:exon

position:211048:1
position: 211048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:226302-226567:1:exon

position:226302:1
position: 226302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226567:1
position: 226567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227147-227644:1:exon

position:227147:1
position: 227147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227644:1
position: 227644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:228901-229110:1:exon

position:228901:1
position: 228901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229110:1
position: 229110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:230051-230149:1:exon

position:230051:1
position: 230051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230149:1
position: 230149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:230830-230976:1:exon

position:230830:1
position: 230830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230976:1
position: 230976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:232738-232878:1:exon

position:232738:1
position: 232738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232878:1
position: 232878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:233771-233827:1:exon

position:233771:1
position: 233771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233827:1
position: 233827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:235631-235750:1:exon

position:235631:1
position: 235631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235750:1
position: 235750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:237236-237364:1:exon

position:237236:1
position: 237236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237364:1
position: 237364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:238360-238443:1:exon

position:238360:1
position: 238360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238443:1
position: 238443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:238747-238809:1:exon

position:238747:1
position: 238747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238809:1
position: 238809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:238978-239076:1:exon

position:238978:1
position: 238978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239076:1
position: 239076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:240443-240541:1:exon

position:240443:1
position: 240443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240541:1
position: 240541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:240864-240917:1:exon

position:240864:1
position: 240864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240917:1
position: 240917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:241673-241738:1:exon

position:241673:1
position: 241673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241738:1
position: 241738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:242576-242644:1:exon

position:242576:1
position: 242576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242644:1
position: 242644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:243642-243719:1:exon

position:243642:1
position: 243642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243719:1
position: 243719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:244343-244546:1:exon

position:244343:1
position: 244343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244546:1
position: 244546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:246487-246552:1:exon

position:246487:1
position: 246487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246552:1
position: 246552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:247215-247287:1:exon

position:247215:1
position: 247215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247287:1
position: 247287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:251588-257241:1:exon

position:251588:1
position: 251588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAKMIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: JAKMIP2
product: janus kinase and microtubule interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_032124758.1
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(210905..211048,226302..226567,227147..227644,228901..229110,230051..230149,230830..230976,232738..232878,233771..233827,235631..235750,237236..237364,238360..238443,238747..238809,238978..239076,240443..240541,240864..240917,241673..241738,242576..242644,243642..243719,244343..244546,246487..246552,247215..247287,253066..257241)
location: region:210905-257241:1
so has part: feature:210905-211048:1:exon
so has part: feature:226302-226567:1:exon
so has part: feature:227147-227644:1:exon
so has part: feature:228901-229110:1:exon
so has part: feature:230051-230149:1:exon
so has part: feature:230830-230976:1:exon
so has part: feature:232738-232878:1:exon
so has part: feature:233771-233827:1:exon
so has part: feature:235631-235750:1:exon
so has part: feature:237236-237364:1:exon
so has part: feature:238360-238443:1:exon
so has part: feature:238747-238809:1:exon
so has part: feature:238978-239076:1:exon
so has part: feature:240443-240541:1:exon
so has part: feature:240864-240917:1:exon
so has part: feature:241673-241738:1:exon
so has part: feature:242576-242644:1:exon
so has part: feature:243642-243719:1:exon
so has part: feature:244343-244546:1:exon
so has part: feature:246487-246552:1:exon
so has part: feature:247215-247287:1:exon
so has part: feature:253066-257241:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210905-211048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226302-226567:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227147-227644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228901-229110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230051-230149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230830-230976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232738-232878:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233771-233827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235631-235750:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237236-237364:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:238360-238443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238747-238809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:238978-239076:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240443-240541:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240864-240917:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:241673-241738:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:242576-242644:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:243642-243719:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244343-244546:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:246487-246552:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:247215-247287:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:253066-257241:1:exon

position:253066:1
position: 253066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAKMIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: JAKMIP2
product: janus kinase and microtubule interacting protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032124759.1
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(210905..211048,226302..226567,227147..227644,228901..229110,230051..230149,230830..230976,232738..232878,233771..233827,235631..235750,237236..237364,238360..238443,238747..238809,238978..239076,240443..240541,240864..240917,241673..241738,242576..242644,243642..243719,244343..244546,246465..246494)
location: region:210905-246494:1
so has part: feature:210905-211048:1:exon
so has part: feature:226302-226567:1:exon
so has part: feature:227147-227644:1:exon
so has part: feature:228901-229110:1:exon
so has part: feature:230051-230149:1:exon
so has part: feature:230830-230976:1:exon
so has part: feature:232738-232878:1:exon
so has part: feature:233771-233827:1:exon
so has part: feature:235631-235750:1:exon
so has part: feature:237236-237364:1:exon
so has part: feature:238360-238443:1:exon
so has part: feature:238747-238809:1:exon
so has part: feature:238978-239076:1:exon
so has part: feature:240443-240541:1:exon
so has part: feature:240864-240917:1:exon
so has part: feature:241673-241738:1:exon
so has part: feature:242576-242644:1:exon
so has part: feature:243642-243719:1:exon
so has part: feature:244343-244546:1:exon
so has part: feature:246465-246494:1:exon

position:246494:1
position: 246494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210905-211048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226302-226567:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227147-227644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228901-229110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230051-230149:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230830-230976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232738-232878:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233771-233827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235631-235750:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237236-237364:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:238360-238443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238747-238809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:238978-239076:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240443-240541:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:240864-240917:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:241673-241738:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:242576-242644:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:243642-243719:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244343-244546:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:246465-246494:1:exon

position:246465:1
position: 246465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JAKMIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: JAKMIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X1
translation: MSKKGRSKGEKPEALIVALQAANEELRTKLTDIQIELHQEKSKVAKLEREKTQETKRIREVEQRKQTVQITELKAKLHEEKMKELQAVRENLIKQHEQEMTRMVKVRDSEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDSERLKLLQEITELKSAKKQVDEALNNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLVDERNELLKRVREAEKQCKPLLEKNKCLTKRNDELMQSLQRMEDKLKAVTKENIEMREKITSHPPLKKLRSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHKRSSKPIKRHVMDTVFGYDDDSMDSETSSVASYRTDRTPATPDDDLDEGLAAEESELRFRQLTKEYQALQRAYALLQEQTGGVIDAEREARAQEQLQAEVQRYKAKIEDLEKTLAQKGQDSHWVEDKQLFIKRNQELLDKIEKMEAENNRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVSIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLTEKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKFLFLFLFFSLAFILWP
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(226439..226567,227147..227644,228901..229110,230051..230149,230830..230976,232738..232878,233771..233827,235631..235750,237236..237364,238360..238443,238747..238809,238978..239076,240443..240541,240864..240917,241673..241738,242576..242644,243642..243719,244343..244546,246487..246552,247215..247265)
location: region:226439-247265:1
so has part: feature:226439-226567:1:exon
so has part: feature:227147-227644:1:exon
so has part: feature:228901-229110:1:exon
so has part: feature:230051-230149:1:exon
so has part: feature:230830-230976:1:exon
so has part: feature:232738-232878:1:exon
so has part: feature:233771-233827:1:exon
so has part: feature:235631-235750:1:exon
so has part: feature:237236-237364:1:exon
so has part: feature:238360-238443:1:exon
so has part: feature:238747-238809:1:exon
so has part: feature:238978-239076:1:exon
so has part: feature:240443-240541:1:exon
so has part: feature:240864-240917:1:exon
so has part: feature:241673-241738:1:exon
so has part: feature:242576-242644:1:exon
so has part: feature:243642-243719:1:exon
so has part: feature:244343-244546:1:exon
so has part: feature:246487-246552:1:exon
so has part: feature:247215-247265:1:exon

XP_031980648.1
type: Protein
SIO_000068: ncbiprotein

position:226439:1
position: 226439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247265:1
position: 247265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226439-226567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227147-227644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228901-229110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230051-230149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230830-230976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232738-232878:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233771-233827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235631-235750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237236-237364:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:238360-238443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:238747-238809:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238978-239076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:240443-240541:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240864-240917:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:241673-241738:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:242576-242644:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:243642-243719:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244343-244546:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:246487-246552:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:247215-247265:1:exon

JAKMIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: JAKMIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X1
translation: MSKKGRSKGEKPEALIVALQAANEELRTKLTDIQIELHQEKSKVAKLEREKTQETKRIREVEQRKQTVQITELKAKLHEEKMKELQAVRENLIKQHEQEMTRMVKVRDSEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDSERLKLLQEITELKSAKKQVDEALNNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLVDERNELLKRVREAEKQCKPLLEKNKCLTKRNDELMQSLQRMEDKLKAVTKENIEMREKITSHPPLKKLRSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHKRSSKPIKRHVMDTVFGYDDDSMDSETSSVASYRTDRTPATPDDDLDEGLAAEESELRFRQLTKEYQALQRAYALLQEQTGGVIDAEREARAQEQLQAEVQRYKAKIEDLEKTLAQKGQDSHWVEDKQLFIKRNQELLDKIEKMEAENNRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVSIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLTEKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKFLFLFLFFSLAFILWP
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(226439..226567,227147..227644,228901..229110,230051..230149,230830..230976,232738..232878,233771..233827,235631..235750,237236..237364,238360..238443,238747..238809,238978..239076,240443..240541,240864..240917,241673..241738,242576..242644,243642..243719,244343..244546,246487..246552,247215..247265)
location: region:226439-247265:1
so has part: feature:226439-226567:1:exon
so has part: feature:227147-227644:1:exon
so has part: feature:228901-229110:1:exon
so has part: feature:230051-230149:1:exon
so has part: feature:230830-230976:1:exon
so has part: feature:232738-232878:1:exon
so has part: feature:233771-233827:1:exon
so has part: feature:235631-235750:1:exon
so has part: feature:237236-237364:1:exon
so has part: feature:238360-238443:1:exon
so has part: feature:238747-238809:1:exon
so has part: feature:238978-239076:1:exon
so has part: feature:240443-240541:1:exon
so has part: feature:240864-240917:1:exon
so has part: feature:241673-241738:1:exon
so has part: feature:242576-242644:1:exon
so has part: feature:243642-243719:1:exon
so has part: feature:244343-244546:1:exon
so has part: feature:246487-246552:1:exon
so has part: feature:247215-247265:1:exon

XP_031980649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226439-226567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227147-227644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228901-229110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230051-230149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230830-230976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232738-232878:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233771-233827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235631-235750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237236-237364:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:238360-238443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:238747-238809:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238978-239076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:240443-240541:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240864-240917:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:241673-241738:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:242576-242644:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:243642-243719:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244343-244546:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:246487-246552:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:247215-247265:1:exon

JAKMIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: JAKMIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: janus kinase and microtubule-interacting protein 2 isoform X2
translation: MSKKGRSKGEKPEALIVALQAANEELRTKLTDIQIELHQEKSKVAKLEREKTQETKRIREVEQRKQTVQITELKAKLHEEKMKELQAVRENLIKQHEQEMTRMVKVRDSEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDSERLKLLQEITELKSAKKQVDEALNNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLVDERNELLKRVREAEKQCKPLLEKNKCLTKRNDELMQSLQRMEDKLKAVTKENIEMREKITSHPPLKKLRSLNDLDQANEEQETEFLKLQVIEQQNIIDELTRDREKLIRRRKHKRSSKPIKRHVMDTVFGYDDDSMDSETSSVASYRTDRTPATPDDDLDEGLAAEESELRFRQLTKEYQALQRAYALLQEQTGGVIDAEREARAQEQLQAEVQRYKAKIEDLEKTLAQKGQDSHWVEDKQLFIKRNQELLDKIEKMEAENNRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGVKDVSIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLTEKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQMFLF
SIO_010081: JAKMIP2
subclass of: SO_0000673
so part of: JAKMIP2
location: join(226439..226567,227147..227644,228901..229110,230051..230149,230830..230976,232738..232878,233771..233827,235631..235750,237236..237364,238360..238443,238747..238809,238978..239076,240443..240541,240864..240917,241673..241738,242576..242644,243642..243719,244343..244546,246465..246479)
location: region:226439-246479:1
so has part: feature:226439-226567:1:exon
so has part: feature:227147-227644:1:exon
so has part: feature:228901-229110:1:exon
so has part: feature:230051-230149:1:exon
so has part: feature:230830-230976:1:exon
so has part: feature:232738-232878:1:exon
so has part: feature:233771-233827:1:exon
so has part: feature:235631-235750:1:exon
so has part: feature:237236-237364:1:exon
so has part: feature:238360-238443:1:exon
so has part: feature:238747-238809:1:exon
so has part: feature:238978-239076:1:exon
so has part: feature:240443-240541:1:exon
so has part: feature:240864-240917:1:exon
so has part: feature:241673-241738:1:exon
so has part: feature:242576-242644:1:exon
so has part: feature:243642-243719:1:exon
so has part: feature:244343-244546:1:exon
so has part: feature:246465-246479:1:exon

XP_031980650.1
type: Protein
SIO_000068: ncbiprotein

position:246479:1
position: 246479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226439-226567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227147-227644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228901-229110:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230051-230149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230830-230976:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232738-232878:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233771-233827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:235631-235750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:237236-237364:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:238360-238443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:238747-238809:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238978-239076:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:240443-240541:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:240864-240917:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:241673-241738:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:242576-242644:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:243642-243719:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:244343-244546:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:246465-246479:1:exon

DPYSL3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: DPYSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 271173..303168
location: region:271173-303168:1
so has part: feature:271173-303168:1:exon
subclass of: SO_0000010

116451511
type: Gene
SIO_000068: ncbigene

position:271173:1
position: 271173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303168:1
position: 303168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271173-303168:1:exon

DPYSL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: DPYSL3
product: dihydropyrimidinase like 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_032125057.1
SIO_010081: DPYSL3
subclass of: SO_0000673
so part of: DPYSL3
location: join(271173..271512,288545..288633,290851..291035,292052..292216,292427..292488,292896..292976,294038..294106,296595..296715,297408..297564,299889..300030,300370..300540,301139..301318,301869..302031,302475..303168)
location: region:271173-303168:1
so has part: feature:271173-271512:1:exon
so has part: feature:288545-288633:1:exon
so has part: feature:290851-291035:1:exon
so has part: feature:292052-292216:1:exon
so has part: feature:292427-292488:1:exon
so has part: feature:292896-292976:1:exon
so has part: feature:294038-294106:1:exon
so has part: feature:296595-296715:1:exon
so has part: feature:297408-297564:1:exon
so has part: feature:299889-300030:1:exon
so has part: feature:300370-300540:1:exon
so has part: feature:301139-301318:1:exon
so has part: feature:301869-302031:1:exon
so has part: feature:302475-303168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271173-271512:1:exon

position:271512:1
position: 271512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288545-288633:1:exon

position:288545:1
position: 288545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288633:1
position: 288633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290851-291035:1:exon

position:290851:1
position: 290851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291035:1
position: 291035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:292052-292216:1:exon

position:292052:1
position: 292052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292216:1
position: 292216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:292427-292488:1:exon

position:292427:1
position: 292427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292488:1
position: 292488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:292896-292976:1:exon

position:292896:1
position: 292896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292976:1
position: 292976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:294038-294106:1:exon

position:294038:1
position: 294038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294106:1
position: 294106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:296595-296715:1:exon

position:296595:1
position: 296595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296715:1
position: 296715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:297408-297564:1:exon

position:297408:1
position: 297408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297564:1
position: 297564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:299889-300030:1:exon

position:299889:1
position: 299889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300030:1
position: 300030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:300370-300540:1:exon

position:300370:1
position: 300370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300540:1
position: 300540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:301139-301318:1:exon

position:301139:1
position: 301139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301318:1
position: 301318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:301869-302031:1:exon

position:301869:1
position: 301869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302031:1
position: 302031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:302475-303168:1:exon

position:302475:1
position: 302475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPYSL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: DPYSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydropyrimidinase-related protein 3 isoform X1
translation: MAADGRRDDEELPVYLARPGSAAVPRQKRGGLFCSVEGAFESKTLDFGALRVGQRRAPPPTRPGPDPDPPPGAAPGSGPTAGDLRAASGEERLQDPAPADDGSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTRLQMPYRGMTAVDDFFQGTKAALAGGTTMIMDHVVPEPESSLAEALERWREWADGKACCDYALHVDIPRWSDHVRQELHTMVQEKGINSFMVYMAYKDLYQMSNTELYEIFSCVAELGAIAQVHAENGDIIAQEQARMLEMGITGPEGHVLSRPEELEAEAVFRAITIASQTNCPLYVTKVMSKSAADLISQARKKGIVVFGEPITASLGTDGTHYWSKNWAKAAAFVVSPPLSPDPTTPDYINSLLASGDLQVSGSAHCTFSTAQKAIGKDNFTAIPEGTNGIEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDSDLVIWDPDAVKIITAKTHQSVAEYNIFEGMELRGAPLVVICQGKIMLEDGNLHVTQGTGRFLPSSPFPDYVYKRIKARRKMAEMHAVPRGLYDGPVFDLTTTPKGSTPAGSTRESPTRQTPPVRNLHQSGFSLSGTQVDEGMRSASKRIVAPPGGRSNITSLS
SIO_010081: DPYSL3
subclass of: SO_0000673
so part of: DPYSL3
location: join(271207..271512,288545..288633,290851..291035,292052..292216,292427..292488,292896..292976,294038..294106,296595..296715,297408..297564,299889..300030,300370..300540,301139..301318,301869..302031,302475..302563)
location: region:271207-302563:1
so has part: feature:271207-271512:1:exon
so has part: feature:288545-288633:1:exon
so has part: feature:290851-291035:1:exon
so has part: feature:292052-292216:1:exon
so has part: feature:292427-292488:1:exon
so has part: feature:292896-292976:1:exon
so has part: feature:294038-294106:1:exon
so has part: feature:296595-296715:1:exon
so has part: feature:297408-297564:1:exon
so has part: feature:299889-300030:1:exon
so has part: feature:300370-300540:1:exon
so has part: feature:301139-301318:1:exon
so has part: feature:301869-302031:1:exon
so has part: feature:302475-302563:1:exon

XP_031980948.1
type: Protein
SIO_000068: ncbiprotein

position:271207:1
position: 271207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302563:1
position: 302563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271207-271512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288545-288633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290851-291035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292052-292216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292427-292488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:292896-292976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:294038-294106:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296595-296715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:297408-297564:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:299889-300030:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:300370-300540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:301139-301318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:301869-302031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:302475-302563:1:exon

DPYSL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: DPYSL3
product: dihydropyrimidinase like 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 59 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_032125058.1
SIO_010081: DPYSL3
subclass of: SO_0000673
so part of: DPYSL3
location: join(281800..281940,288545..288633,290851..291035,292052..292216,292427..292488,292896..292976,294038..294106,296595..296715,297408..297564,299889..300030,300370..300540,301139..301318,301869..302031,302475..303168)
location: region:281800-303168:1
so has part: feature:281800-281940:1:exon
so has part: feature:288545-288633:1:exon
so has part: feature:290851-291035:1:exon
so has part: feature:292052-292216:1:exon
so has part: feature:292427-292488:1:exon
so has part: feature:292896-292976:1:exon
so has part: feature:294038-294106:1:exon
so has part: feature:296595-296715:1:exon
so has part: feature:297408-297564:1:exon
so has part: feature:299889-300030:1:exon
so has part: feature:300370-300540:1:exon
so has part: feature:301139-301318:1:exon
so has part: feature:301869-302031:1:exon
so has part: feature:302475-303168:1:exon

position:281800:1
position: 281800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281800-281940:1:exon

position:281940:1
position: 281940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288545-288633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290851-291035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292052-292216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292427-292488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:292896-292976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:294038-294106:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296595-296715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:297408-297564:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:299889-300030:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:300370-300540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:301139-301318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:301869-302031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:302475-303168:1:exon

DPYSL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: DPYSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydropyrimidinase-related protein 3 isoform X2
translation: MSYQGKKNIPRITSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTRLQMPYRGMTAVDDFFQGTKAALAGGTTMIMDHVVPEPESSLAEALERWREWADGKACCDYALHVDIPRWSDHVRQELHTMVQEKGINSFMVYMAYKDLYQMSNTELYEIFSCVAELGAIAQVHAENGDIIAQEQARMLEMGITGPEGHVLSRPEELEAEAVFRAITIASQTNCPLYVTKVMSKSAADLISQARKKGIVVFGEPITASLGTDGTHYWSKNWAKAAAFVVSPPLSPDPTTPDYINSLLASGDLQVSGSAHCTFSTAQKAIGKDNFTAIPEGTNGIEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDSDLVIWDPDAVKIITAKTHQSVAEYNIFEGMELRGAPLVVICQGKIMLEDGNLHVTQGTGRFLPSSPFPDYVYKRIKARRKMAEMHAVPRGLYDGPVFDLTTTPKGSTPAGSTRESPTRQTPPVRNLHQSGFSLSGTQVDEGMRSASKRIVAPPGGRSNITSLS
SIO_010081: DPYSL3
subclass of: SO_0000673
so part of: DPYSL3
location: join(281902..281940,288545..288633,290851..291035,292052..292216,292427..292488,292896..292976,294038..294106,296595..296715,297408..297564,299889..300030,300370..300540,301139..301318,301869..302031,302475..302563)
location: region:281902-302563:1
so has part: feature:281902-281940:1:exon
so has part: feature:288545-288633:1:exon
so has part: feature:290851-291035:1:exon
so has part: feature:292052-292216:1:exon
so has part: feature:292427-292488:1:exon
so has part: feature:292896-292976:1:exon
so has part: feature:294038-294106:1:exon
so has part: feature:296595-296715:1:exon
so has part: feature:297408-297564:1:exon
so has part: feature:299889-300030:1:exon
so has part: feature:300370-300540:1:exon
so has part: feature:301139-301318:1:exon
so has part: feature:301869-302031:1:exon
so has part: feature:302475-302563:1:exon

XP_031980949.1
type: Protein
SIO_000068: ncbiprotein

position:281902:1
position: 281902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281902-281940:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288545-288633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290851-291035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292052-292216:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292427-292488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:292896-292976:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:294038-294106:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296595-296715:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:297408-297564:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:299889-300030:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:300370-300540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:301139-301318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:301869-302031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:302475-302563:1:exon

STK32A
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: STK32A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(305038..329528)
location: region:305038-329528:-1
so has part: feature:305038-329528:-1:exon
subclass of: SO_0000010

116451678
type: Gene
SIO_000068: ncbigene

position:305038:-1
position: 305038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329528:-1
position: 329528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305038-329528:-1:exon

STK32A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: STK32A
product: serine/threonine kinase 32A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032125343.1
SIO_010081: STK32A
subclass of: SO_0000673
so part of: STK32A
location: complement(join(305038..306164,306436..306500,306846..306974,307910..308035,309760..309876,311693..311790,313038..313127,318081..318118,320693..320866,321687..321838,322838..322893,326752..326928,329404..329528))
location: region:305038-329528:-1
so has part: feature:329404-329528:-1:exon
so has part: feature:326752-326928:-1:exon
so has part: feature:322838-322893:-1:exon
so has part: feature:321687-321838:-1:exon
so has part: feature:320693-320866:-1:exon
so has part: feature:318081-318118:-1:exon
so has part: feature:313038-313127:-1:exon
so has part: feature:311693-311790:-1:exon
so has part: feature:309760-309876:-1:exon
so has part: feature:307910-308035:-1:exon
so has part: feature:306846-306974:-1:exon
so has part: feature:306436-306500:-1:exon
so has part: feature:305038-306164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329404-329528:-1:exon

position:329404:-1
position: 329404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326752-326928:-1:exon

position:326752:-1
position: 326752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326928:-1
position: 326928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322838-322893:-1:exon

position:322838:-1
position: 322838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322893:-1
position: 322893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321687-321838:-1:exon

position:321687:-1
position: 321687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321838:-1
position: 321838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320693-320866:-1:exon

position:320693:-1
position: 320693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320866:-1
position: 320866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:318081-318118:-1:exon

position:318081:-1
position: 318081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318118:-1
position: 318118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:313038-313127:-1:exon

position:313038:-1
position: 313038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313127:-1
position: 313127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:311693-311790:-1:exon

position:311693:-1
position: 311693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311790:-1
position: 311790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:309760-309876:-1:exon

position:309760:-1
position: 309760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309876:-1
position: 309876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:307910-308035:-1:exon

position:307910:-1
position: 307910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308035:-1
position: 308035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:306846-306974:-1:exon

position:306846:-1
position: 306846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306974:-1
position: 306974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:306436-306500:-1:exon

position:306436:-1
position: 306436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306500:-1
position: 306500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:305038-306164:-1:exon

position:306164:-1
position: 306164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STK32A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: STK32A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 32A
translation: MGATTSSKSPPFDGNEDVTFDHFEILRAIGKGSFGKVCVVQKTDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVRFQEGTVKLFICELVLALDYLQSRHIIHRDIKPDNILLDEHGHVHITDFNIATMLTKESHVTTIAGTKPYMAPEMFNSTKPTSYSFAVDWWSLGVTAYELLRTRRPYHIRSNTSADDIAHVFKTATVMYPAAWSPDMVSLIKKLLELNPEKRFSQLKDIQSFPYLSDVNWDAVLQKRVMPEFIPMKGRLNCDPAFELEEMILESKPLHKKKKRLAKKEKDTSKSNSSQASHLQKHLEMLQRDFIVFNREKVRPHHDSIQETMTKSGGTHREDNQNNHL
SIO_010081: STK32A
subclass of: SO_0000673
so part of: STK32A
location: complement(join(306077..306164,306436..306500,306846..306974,307910..308035,309760..309876,311693..311790,313038..313127,318081..318118,320693..320866,321687..321838,322838..322893,326752..326803))
location: region:306077-326803:-1
so has part: feature:326752-326803:-1:exon
so has part: feature:322838-322893:-1:exon
so has part: feature:321687-321838:-1:exon
so has part: feature:320693-320866:-1:exon
so has part: feature:318081-318118:-1:exon
so has part: feature:313038-313127:-1:exon
so has part: feature:311693-311790:-1:exon
so has part: feature:309760-309876:-1:exon
so has part: feature:307910-308035:-1:exon
so has part: feature:306846-306974:-1:exon
so has part: feature:306436-306500:-1:exon
so has part: feature:306077-306164:-1:exon

XP_031981234.1
type: Protein
SIO_000068: ncbiprotein

position:306077:-1
position: 306077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326803:-1
position: 326803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326752-326803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322838-322893:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321687-321838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320693-320866:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318081-318118:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313038-313127:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311693-311790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:309760-309876:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307910-308035:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:306846-306974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:306436-306500:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:306077-306164:-1:exon

PPP2R2B
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 335001..402046
location: region:335001-402046:1
so has part: feature:335001-402046:1:exon
subclass of: SO_0000010

116451659
type: Gene
SIO_000068: ncbigene

position:335001:1
position: 335001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402046:1
position: 402046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335001-402046:1:exon

PPP2R2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PPP2R2B
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 80 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032125320.1
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(335001..335100,335234..335311,386417..386514,387810..387975,389314..389426,395383..395560,396817..396981,398777..398946,399489..399580,400099..402046)
location: region:335001-402046:1
so has part: feature:335001-335100:1:exon
so has part: feature:335234-335311:1:exon
so has part: feature:386417-386514:1:exon
so has part: feature:387810-387975:1:exon
so has part: feature:389314-389426:1:exon
so has part: feature:395383-395560:1:exon
so has part: feature:396817-396981:1:exon
so has part: feature:398777-398946:1:exon
so has part: feature:399489-399580:1:exon
so has part: feature:400099-402046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335001-335100:1:exon

position:335100:1
position: 335100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335234-335311:1:exon

position:335234:1
position: 335234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335311:1
position: 335311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:386417-386514:1:exon

position:386417:1
position: 386417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386514:1
position: 386514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:387810-387975:1:exon

position:387810:1
position: 387810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387975:1
position: 387975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:389314-389426:1:exon

position:389314:1
position: 389314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389426:1
position: 389426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:395383-395560:1:exon

position:395383:1
position: 395383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395560:1
position: 395560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:396817-396981:1:exon

position:396817:1
position: 396817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396981:1
position: 396981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:398777-398946:1:exon

position:398777:1
position: 398777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398946:1
position: 398946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:399489-399580:1:exon

position:399489:1
position: 399489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399580:1
position: 399580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:400099-402046:1:exon

position:400099:1
position: 400099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP2R2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
translation: MTPGFGSLMQDVLWCFSQVKGTIDTGVTEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEDGRLRDPSMITMLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRTAALCDRHAKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(335091..335100,335234..335311,386417..386514,387810..387975,389314..389426,395383..395560,396817..396981,398777..398946,399489..399580,400099..400378)
location: region:335091-400378:1
so has part: feature:335091-335100:1:exon
so has part: feature:335234-335311:1:exon
so has part: feature:386417-386514:1:exon
so has part: feature:387810-387975:1:exon
so has part: feature:389314-389426:1:exon
so has part: feature:395383-395560:1:exon
so has part: feature:396817-396981:1:exon
so has part: feature:398777-398946:1:exon
so has part: feature:399489-399580:1:exon
so has part: feature:400099-400378:1:exon

XP_031981211.1
type: Protein
SIO_000068: ncbiprotein

position:335091:1
position: 335091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400378:1
position: 400378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335091-335100:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335234-335311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386417-386514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387810-387975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389314-389426:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:395383-395560:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:396817-396981:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398777-398946:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399489-399580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:400099-400378:1:exon

PPP2R2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PPP2R2B
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 80 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_032125321.1
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(337615..337771,386417..386514,387810..387975,389314..389426,395383..395560,396817..396981,398777..398946,399489..399580,400099..402046)
location: region:337615-402046:1
so has part: feature:337615-337771:1:exon
so has part: feature:386417-386514:1:exon
so has part: feature:387810-387975:1:exon
so has part: feature:389314-389426:1:exon
so has part: feature:395383-395560:1:exon
so has part: feature:396817-396981:1:exon
so has part: feature:398777-398946:1:exon
so has part: feature:399489-399580:1:exon
so has part: feature:400099-402046:1:exon

position:337615:1
position: 337615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337615-337771:1:exon

position:337771:1
position: 337771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:386417-386514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387810-387975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389314-389426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395383-395560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396817-396981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398777-398946:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399489-399580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400099-402046:1:exon

PPP2R2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2
translation: MKCFSRYLPYLFRPHGALRSASCHAEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEDGRLRDPSMITMLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRTAALCDRHAKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(337693..337771,386417..386514,387810..387975,389314..389426,395383..395560,396817..396981,398777..398946,399489..399580,400099..400378)
location: region:337693-400378:1
so has part: feature:337693-337771:1:exon
so has part: feature:386417-386514:1:exon
so has part: feature:387810-387975:1:exon
so has part: feature:389314-389426:1:exon
so has part: feature:395383-395560:1:exon
so has part: feature:396817-396981:1:exon
so has part: feature:398777-398946:1:exon
so has part: feature:399489-399580:1:exon
so has part: feature:400099-400378:1:exon

XP_031981212.1
type: Protein
SIO_000068: ncbiprotein

position:337693:1
position: 337693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337693-337771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:386417-386514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387810-387975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389314-389426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395383-395560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396817-396981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398777-398946:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399489-399580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400099-400378:1:exon

LOC116451660
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 339628..344311
location: region:339628-344311:1
so has part: feature:339628-344311:1:exon
subclass of: SO_0000011

116451660
type: Gene
SIO_000068: ncbigene

position:339628:1
position: 339628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344311:1
position: 344311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339628-344311:1:exon

LOC116451660
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451660
product: uncharacterized LOC116451660
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004243269.1
SIO_010081: LOC116451660
subclass of: SO_0000673
so part of: LOC116451660
location: join(339628..341251,343171..344311)
location: region:339628-344311:1
so has part: feature:339628-341251:1:exon
so has part: feature:343171-344311:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339628-341251:1:exon

position:341251:1
position: 341251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343171-344311:1:exon

position:343171:1
position: 343171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP2R2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PPP2R2B
product: protein phosphatase 2 regulatory subunit Bbeta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 82 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_032125322.1
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(357441..357620,386417..386514,387810..387975,389314..389426,395383..395560,396817..396981,398777..398946,399489..399580,400099..402046)
location: region:357441-402046:1
so has part: feature:357441-357620:1:exon
so has part: feature:386417-386514:1:exon
so has part: feature:387810-387975:1:exon
so has part: feature:389314-389426:1:exon
so has part: feature:395383-395560:1:exon
so has part: feature:396817-396981:1:exon
so has part: feature:398777-398946:1:exon
so has part: feature:399489-399580:1:exon
so has part: feature:400099-402046:1:exon

position:357441:1
position: 357441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357441-357620:1:exon

position:357620:1
position: 357620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:386417-386514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387810-387975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389314-389426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395383-395560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396817-396981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398777-398946:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399489-399580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400099-402046:1:exon

PPP2R2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PPP2R2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X3
translation: MEEDAETRKISSSFLRDHSYATEADIISTVEFNHTGELLATGDKGGRVVIFQREQESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKVSERDKRPEGYNLKDEDGRLRDPSMITMLRVPVLRPMDLMVEATPRRVFANAHTYHINSISVNSDYETYMSADDLRINLWNFEITNQSFNIVDIKPANMEELTEVITAAEFHPHHCNTFVYSSSKGTIRLCDMRTAALCDRHAKFFEEPEDPSNRSFFSEIISSISDVKFSHSGRYIMTRDYLTVKVWDLNMENRPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKKILHTAWHPSENIIAVAATNNLYIFQDKVN
SIO_010081: PPP2R2B
subclass of: SO_0000673
so part of: PPP2R2B
location: join(357551..357620,386417..386514,387810..387975,389314..389426,395383..395560,396817..396981,398777..398946,399489..399580,400099..400378)
location: region:357551-400378:1
so has part: feature:357551-357620:1:exon
so has part: feature:386417-386514:1:exon
so has part: feature:387810-387975:1:exon
so has part: feature:389314-389426:1:exon
so has part: feature:395383-395560:1:exon
so has part: feature:396817-396981:1:exon
so has part: feature:398777-398946:1:exon
so has part: feature:399489-399580:1:exon
so has part: feature:400099-400378:1:exon

XP_031981213.1
type: Protein
SIO_000068: ncbiprotein

position:357551:1
position: 357551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357551-357620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:386417-386514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:387810-387975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389314-389426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395383-395560:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396817-396981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:398777-398946:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399489-399580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400099-400378:1:exon

TCERG1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(402814..433416)
location: region:402814-433416:-1
so has part: feature:402814-433416:-1:exon
subclass of: SO_0000010

116451658
type: Gene
SIO_000068: ncbigene

position:402814:-1
position: 402814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433416:-1
position: 433416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402814-433416:-1:exon

TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_032125319.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(402814..403988,404369..404469,404725..404808,405663..405842,406421..406603,407316..407480,411636..411786,413746..413864,414586..414675,415499..415634,416662..416728,417500..417660,418649..418737,419847..419962,421228..421428,429195..429432,429584..429736,432214..432439,433335..433416))
location: region:402814-433416:-1
so has part: feature:433335-433416:-1:exon
so has part: feature:432214-432439:-1:exon
so has part: feature:429584-429736:-1:exon
so has part: feature:429195-429432:-1:exon
so has part: feature:421228-421428:-1:exon
so has part: feature:419847-419962:-1:exon
so has part: feature:418649-418737:-1:exon
so has part: feature:417500-417660:-1:exon
so has part: feature:416662-416728:-1:exon
so has part: feature:415499-415634:-1:exon
so has part: feature:414586-414675:-1:exon
so has part: feature:413746-413864:-1:exon
so has part: feature:411636-411786:-1:exon
so has part: feature:407316-407480:-1:exon
so has part: feature:406421-406603:-1:exon
so has part: feature:405663-405842:-1:exon
so has part: feature:404725-404808:-1:exon
so has part: feature:404369-404469:-1:exon
so has part: feature:402814-403988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433335-433416:-1:exon

position:433335:-1
position: 433335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:432214-432439:-1:exon

position:432214:-1
position: 432214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432439:-1
position: 432439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:429584-429736:-1:exon

position:429584:-1
position: 429584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429736:-1
position: 429736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:429195-429432:-1:exon

position:429195:-1
position: 429195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429432:-1
position: 429432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:421228-421428:-1:exon

position:421228:-1
position: 421228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421428:-1
position: 421428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:419847-419962:-1:exon

position:419847:-1
position: 419847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419962:-1
position: 419962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:418649-418737:-1:exon

position:418649:-1
position: 418649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418737:-1
position: 418737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:417500-417660:-1:exon

position:417500:-1
position: 417500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417660:-1
position: 417660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:416662-416728:-1:exon

position:416662:-1
position: 416662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416728:-1
position: 416728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:415499-415634:-1:exon

position:415499:-1
position: 415499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415634:-1
position: 415634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:414586-414675:-1:exon

position:414586:-1
position: 414586
reference: sequence
type: ReverseStrandPosition
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urn:…
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TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_032125318.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(402814..403988,404369..404469,404725..404808,405663..405842,406421..406603,407316..407480,411636..411786,413746..413864,414586..414675,415499..415634,416662..416728,417500..417660,418649..418737,419847..419962,421228..421428,422685..422747,429195..429432,429584..429736,432214..432439,433335..433416))
location: region:402814-433416:-1
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urn:…
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SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 18
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SIO_000300: 20
SIO_000628: feature:402814-403988:-1:exon

TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_032125317.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(402814..403988,404369..404469,404725..404808,405663..405842,406421..406603,407316..407480,411636..411786,413746..413864,414586..414675,415499..415634,416662..416728,417500..417660,418649..418737,419847..419962,421228..421428,426366..426608,429195..429432,429584..429736,432214..432439,433335..433416))
location: region:402814-433416:-1
so has part: feature:433335-433416:-1:exon
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urn:…
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urn:…
SIO_000300: 5
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position:426366:-1
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reference: sequence
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SIO_000300: 6
SIO_000628: feature:421228-421428:-1:exon

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SIO_000300: 16
SIO_000628: feature:406421-406603:-1:exon

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SIO_000300: 17
SIO_000628: feature:405663-405842:-1:exon

urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
SIO_000628: feature:404369-404469:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:402814-403988:-1:exon

TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_032125316.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(402814..403988,404369..404469,404725..404808,405663..405842,406421..406603,407316..407480,411636..411786,413746..413864,414586..414675,415499..415634,416662..416728,417500..417660,418649..418734,419847..419962,421228..421428,422685..422747,426366..426608,429195..429432,429584..429736,432214..432439,433335..433416))
location: region:402814-433416:-1
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urn:…
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SIO_000628: feature:419847-419962:-1:exon

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SIO_000628: feature:418649-418734:-1:exon

position:418734:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:417500-417660:-1:exon

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SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:402814-403988:-1:exon

TCERG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TCERG1
product: transcription elongation regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_032125315.1
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(402814..403988,404369..404469,404725..404808,405663..405842,406421..406603,407316..407480,411636..411786,413746..413864,414586..414675,415499..415634,416662..416728,417500..417660,418649..418737,419847..419962,421228..421428,422685..422747,426366..426608,429195..429432,429584..429736,432214..432439,433335..433416))
location: region:402814-433416:-1
so has part: feature:433335-433416:-1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:402814-403988:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X5
translation: MAERGGGGGDGEAAAGERFGTDLRMAQQQALRFRGPAPPPSAVLRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPSMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVSAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTNSRVLPGMAPPIVPMIHPQVAIAASPATLAGAAAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKVKEPIKEPSEEPLPMETEEEEPKEEPMKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHEAAEEANEDEPIKIKKRKKDDIKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(403787..403988,404369..404469,404725..404808,405663..405842,406421..406603,407316..407480,411636..411786,413746..413864,414586..414675,415499..415634,416662..416728,417500..417660,418649..418737,419847..419962,421228..421428,429195..429432,429584..429736,432214..432439,433335..433405))
location: region:403787-433405:-1
so has part: feature:433335-433405:-1:exon
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so has part: feature:403787-403988:-1:exon

XP_031981210.1
type: Protein
SIO_000068: ncbiprotein

position:403787:-1
position: 403787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433405:-1
position: 433405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433335-433405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432214-432439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429584-429736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:429195-429432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:421228-421428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419847-419962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418649-418737:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417500-417660:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416662-416728:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:415499-415634:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414586-414675:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:413746-413864:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411636-411786:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:407316-407480:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:406421-406603:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:405663-405842:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:404725-404808:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:404369-404469:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:403787-403988:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X4
translation: MAERGGGGGDGEAAAGERFGTDLRMAQQQALRFRGPAPPPSAVLRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPSMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVSAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTNSSVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGAAAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKVKEPIKEPSEEPLPMETEEEEPKEEPMKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHEAAEEANEDEPIKIKKRKKDDIKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(403787..403988,404369..404469,404725..404808,405663..405842,406421..406603,407316..407480,411636..411786,413746..413864,414586..414675,415499..415634,416662..416728,417500..417660,418649..418737,419847..419962,421228..421428,422685..422747,429195..429432,429584..429736,432214..432439,433335..433405))
location: region:403787-433405:-1
so has part: feature:433335-433405:-1:exon
so has part: feature:432214-432439:-1:exon
so has part: feature:429584-429736:-1:exon
so has part: feature:429195-429432:-1:exon
so has part: feature:422685-422747:-1:exon
so has part: feature:421228-421428:-1:exon
so has part: feature:419847-419962:-1:exon
so has part: feature:418649-418737:-1:exon
so has part: feature:417500-417660:-1:exon
so has part: feature:416662-416728:-1:exon
so has part: feature:415499-415634:-1:exon
so has part: feature:414586-414675:-1:exon
so has part: feature:413746-413864:-1:exon
so has part: feature:411636-411786:-1:exon
so has part: feature:407316-407480:-1:exon
so has part: feature:406421-406603:-1:exon
so has part: feature:405663-405842:-1:exon
so has part: feature:404725-404808:-1:exon
so has part: feature:404369-404469:-1:exon
so has part: feature:403787-403988:-1:exon

XP_031981209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433335-433405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432214-432439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429584-429736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:429195-429432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422685-422747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:421228-421428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:419847-419962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:418649-418737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417500-417660:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416662-416728:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415499-415634:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:414586-414675:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:413746-413864:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:411636-411786:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:407316-407480:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:406421-406603:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:405663-405842:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:404725-404808:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:404369-404469:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:403787-403988:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X3
translation: MAERGGGGGDGEAAAGERFGTDLRMAQQQALRFRGPAPPPSAVLRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPSMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVSAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTNSTPTTQDQTPSSGVSVATPSVSVSTSAPSATPVQTVPQPVPQTLPPAVPHAVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVLPGMAPPIVPMIHPQVAIAASPATLAGAAAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKVKEPIKEPSEEPLPMETEEEEPKEEPMKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHEAAEEANEDEPIKIKKRKKDDIKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(403787..403988,404369..404469,404725..404808,405663..405842,406421..406603,407316..407480,411636..411786,413746..413864,414586..414675,415499..415634,416662..416728,417500..417660,418649..418737,419847..419962,421228..421428,426366..426608,429195..429432,429584..429736,432214..432439,433335..433405))
location: region:403787-433405:-1
so has part: feature:433335-433405:-1:exon
so has part: feature:432214-432439:-1:exon
so has part: feature:429584-429736:-1:exon
so has part: feature:429195-429432:-1:exon
so has part: feature:426366-426608:-1:exon
so has part: feature:421228-421428:-1:exon
so has part: feature:419847-419962:-1:exon
so has part: feature:418649-418737:-1:exon
so has part: feature:417500-417660:-1:exon
so has part: feature:416662-416728:-1:exon
so has part: feature:415499-415634:-1:exon
so has part: feature:414586-414675:-1:exon
so has part: feature:413746-413864:-1:exon
so has part: feature:411636-411786:-1:exon
so has part: feature:407316-407480:-1:exon
so has part: feature:406421-406603:-1:exon
so has part: feature:405663-405842:-1:exon
so has part: feature:404725-404808:-1:exon
so has part: feature:404369-404469:-1:exon
so has part: feature:403787-403988:-1:exon

XP_031981208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433335-433405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432214-432439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429584-429736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:429195-429432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426366-426608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:421228-421428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:419847-419962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:418649-418737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417500-417660:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416662-416728:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415499-415634:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:414586-414675:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:413746-413864:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:411636-411786:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:407316-407480:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:406421-406603:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:405663-405842:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:404725-404808:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:404369-404469:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:403787-403988:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X2
translation: MAERGGGGGDGEAAAGERFGTDLRMAQQQALRFRGPAPPPSAVLRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPSMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVSAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTNSTPTTQDQTPSSGVSVATPSVSVSTSAPSATPVQTVPQPVPQTLPPAVPHAVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGAAAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKVKEPIKEPSEEPLPMETEEEEPKEEPMKELIKEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHEAAEEANEDEPIKIKKRKKDDIKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(403787..403988,404369..404469,404725..404808,405663..405842,406421..406603,407316..407480,411636..411786,413746..413864,414586..414675,415499..415634,416662..416728,417500..417660,418649..418734,419847..419962,421228..421428,422685..422747,426366..426608,429195..429432,429584..429736,432214..432439,433335..433405))
location: region:403787-433405:-1
so has part: feature:433335-433405:-1:exon
so has part: feature:432214-432439:-1:exon
so has part: feature:429584-429736:-1:exon
so has part: feature:429195-429432:-1:exon
so has part: feature:426366-426608:-1:exon
so has part: feature:422685-422747:-1:exon
so has part: feature:421228-421428:-1:exon
so has part: feature:419847-419962:-1:exon
so has part: feature:418649-418734:-1:exon
so has part: feature:417500-417660:-1:exon
so has part: feature:416662-416728:-1:exon
so has part: feature:415499-415634:-1:exon
so has part: feature:414586-414675:-1:exon
so has part: feature:413746-413864:-1:exon
so has part: feature:411636-411786:-1:exon
so has part: feature:407316-407480:-1:exon
so has part: feature:406421-406603:-1:exon
so has part: feature:405663-405842:-1:exon
so has part: feature:404725-404808:-1:exon
so has part: feature:404369-404469:-1:exon
so has part: feature:403787-403988:-1:exon

XP_031981207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433335-433405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432214-432439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429584-429736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:429195-429432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426366-426608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422685-422747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421228-421428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:419847-419962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:418649-418734:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:417500-417660:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:416662-416728:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:415499-415634:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:414586-414675:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:413746-413864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:411636-411786:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:407316-407480:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:406421-406603:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:405663-405842:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:404725-404808:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404369-404469:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403787-403988:-1:exon

TCERG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TCERG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation regulator 1 isoform X1
translation: MAERGGGGGDGEAAAGERFGTDLRMAQQQALRFRGPAPPPSAVLRGPPPLLRPPPPFGMMRGPPPPPRPPFGRPPFDPSMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGSMPPPPGMMFPPGMPPVSAPGTPAMPPAEEIWVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQAVGASTPTTSSPASAASPSTSSSTQSSTTSTTTTATSVSQTNSTPTTQDQTPSSGVSVATPSVSVSTSAPSATPVQTVPQPVPQTLPPAVPHAVPQPTAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGAAAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKMEEKVKEPIKEPSEEPLPMETEEEEPKEEPMKELIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEGKKLIREEHEAAEEANEDEPIKIKKRKKDDIKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEEAKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRSKKLIQESDQHLKDVEKILQNDKRYLVLDCVPEERRKLIVSYVDDLDRRGPPPPPTASEPTRRTTK
SIO_010081: TCERG1
subclass of: SO_0000673
so part of: TCERG1
location: complement(join(403787..403988,404369..404469,404725..404808,405663..405842,406421..406603,407316..407480,411636..411786,413746..413864,414586..414675,415499..415634,416662..416728,417500..417660,418649..418737,419847..419962,421228..421428,422685..422747,426366..426608,429195..429432,429584..429736,432214..432439,433335..433405))
location: region:403787-433405:-1
so has part: feature:433335-433405:-1:exon
so has part: feature:432214-432439:-1:exon
so has part: feature:429584-429736:-1:exon
so has part: feature:429195-429432:-1:exon
so has part: feature:426366-426608:-1:exon
so has part: feature:422685-422747:-1:exon
so has part: feature:421228-421428:-1:exon
so has part: feature:419847-419962:-1:exon
so has part: feature:418649-418737:-1:exon
so has part: feature:417500-417660:-1:exon
so has part: feature:416662-416728:-1:exon
so has part: feature:415499-415634:-1:exon
so has part: feature:414586-414675:-1:exon
so has part: feature:413746-413864:-1:exon
so has part: feature:411636-411786:-1:exon
so has part: feature:407316-407480:-1:exon
so has part: feature:406421-406603:-1:exon
so has part: feature:405663-405842:-1:exon
so has part: feature:404725-404808:-1:exon
so has part: feature:404369-404469:-1:exon
so has part: feature:403787-403988:-1:exon

XP_031981206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433335-433405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432214-432439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429584-429736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:429195-429432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426366-426608:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422685-422747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421228-421428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:419847-419962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:418649-418737:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:417500-417660:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:416662-416728:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:415499-415634:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:414586-414675:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:413746-413864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:411636-411786:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:407316-407480:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:406421-406603:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:405663-405842:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:404725-404808:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:404369-404469:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403787-403988:-1:exon

POU4F3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: POU4F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(445074..446486)
location: region:445074-446486:-1
so has part: feature:445074-446486:-1:exon
subclass of: SO_0000010

116451465
type: Gene
SIO_000068: ncbigene

position:445074:-1
position: 445074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446486:-1
position: 446486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445074-446486:-1:exon

POU4F3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: POU4F3
product: POU class 4 homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032124974.1
SIO_010081: POU4F3
subclass of: SO_0000673
so part of: POU4F3
location: complement(join(445074..446018,446267..446486))
location: region:445074-446486:-1
so has part: feature:446267-446486:-1:exon
so has part: feature:445074-446018:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446267-446486:-1:exon

position:446267:-1
position: 446267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445074-446018:-1:exon

position:446018:-1
position: 446018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POU4F3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: POU4F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 4, transcription factor 3
translation: MMAMDAKQPFAVPAALQDPKFPSLHAGAEAMRRVCLPAPQLQGNIFGSFDESLLARAEALAAADIAPQAKAHHLHPHFKPDAAFHAMSGVPCAAAALPHPAALTAHPHPLPHPALDGGDLLEHLSPSLAVAGLAEPPALPAPLPPPPLPGAAAGPLPVPVGAPGGPAPAADPRELEAFAERFKQRRVRLGVTQADVGAALAALKLPGVGSLSQSTICRFESLTLSHNNMTALRPVLQAWLEGAEAARRARPAGPDPPPGAERKRRRTSIAAPERRSLEAYFALQPRPSAEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH
SIO_010081: POU4F3
subclass of: SO_0000673
so part of: POU4F3
location: complement(join(445158..446018,446267..446386))
location: region:445158-446386:-1
so has part: feature:446267-446386:-1:exon
so has part: feature:445158-446018:-1:exon

XP_031980865.1
type: Protein
SIO_000068: ncbiprotein

position:445158:-1
position: 445158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446386:-1
position: 446386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446267-446386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445158-446018:-1:exon

RBM27
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(453465..476377)
location: region:453465-476377:-1
so has part: feature:453465-476377:-1:exon
subclass of: SO_0000010

116451464
type: Gene
SIO_000068: ncbigene

position:453465:-1
position: 453465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476377:-1
position: 476377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453465-476377:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RBM27
product: RNA binding motif protein 27, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XM_032124972.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(453465..456428,457043..457153,457620..457706,457972..458163,458257..458361,458778..458942,459051..459125,459627..459749,460570..460698,460798..461049,462202..462355,462639..462786,464567..464716,466685..466819,467937..468170,468735..468998,469799..469989,470560..470666,472478..472602,473403..473521,476241..476377))
location: region:453465-476377:-1
so has part: feature:476241-476377:-1:exon
so has part: feature:473403-473521:-1:exon
so has part: feature:472478-472602:-1:exon
so has part: feature:470560-470666:-1:exon
so has part: feature:469799-469989:-1:exon
so has part: feature:468735-468998:-1:exon
so has part: feature:467937-468170:-1:exon
so has part: feature:466685-466819:-1:exon
so has part: feature:464567-464716:-1:exon
so has part: feature:462639-462786:-1:exon
so has part: feature:462202-462355:-1:exon
so has part: feature:460798-461049:-1:exon
so has part: feature:460570-460698:-1:exon
so has part: feature:459627-459749:-1:exon
so has part: feature:459051-459125:-1:exon
so has part: feature:458778-458942:-1:exon
so has part: feature:458257-458361:-1:exon
so has part: feature:457972-458163:-1:exon
so has part: feature:457620-457706:-1:exon
so has part: feature:457043-457153:-1:exon
so has part: feature:453465-456428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476241-476377:-1:exon

position:476241:-1
position: 476241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473403-473521:-1:exon

position:473403:-1
position: 473403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473521:-1
position: 473521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:472478-472602:-1:exon

position:472478:-1
position: 472478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472602:-1
position: 472602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:470560-470666:-1:exon

position:470560:-1
position: 470560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470666:-1
position: 470666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:469799-469989:-1:exon

position:469799:-1
position: 469799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469989:-1
position: 469989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:468735-468998:-1:exon

position:468735:-1
position: 468735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468998:-1
position: 468998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:467937-468170:-1:exon

position:467937:-1
position: 467937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468170:-1
position: 468170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:466685-466819:-1:exon

position:466685:-1
position: 466685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466819:-1
position: 466819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:464567-464716:-1:exon

position:464567:-1
position: 464567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464716:-1
position: 464716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:462639-462786:-1:exon

position:462639:-1
position: 462639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462786:-1
position: 462786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:462202-462355:-1:exon

position:462202:-1
position: 462202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462355:-1
position: 462355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:460798-461049:-1:exon

position:460798:-1
position: 460798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461049:-1
position: 461049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:460570-460698:-1:exon

position:460570:-1
position: 460570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460698:-1
position: 460698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:459627-459749:-1:exon

position:459627:-1
position: 459627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459749:-1
position: 459749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:459051-459125:-1:exon

position:459051:-1
position: 459051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459125:-1
position: 459125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:458778-458942:-1:exon

position:458778:-1
position: 458778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458942:-1
position: 458942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:458257-458361:-1:exon

position:458257:-1
position: 458257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458361:-1
position: 458361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:457972-458163:-1:exon

position:457972:-1
position: 457972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458163:-1
position: 458163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:457620-457706:-1:exon

position:457620:-1
position: 457620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457706:-1
position: 457706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:457043-457153:-1:exon

position:457043:-1
position: 457043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457153:-1
position: 457153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:453465-456428:-1:exon

position:456428:-1
position: 456428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RBM27
product: RNA binding motif protein 27, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_032124973.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(453465..456428,457043..457153,457620..457706,457972..458163,458257..458361,458778..458942,459051..459125,459627..459749,460570..460698,460798..461049,462202..462355,462639..462786,466685..466819,467937..468170,468735..468998,469301..469384,469799..469989,470560..470666,472478..472602,473403..473521,476241..476377))
location: region:453465-476377:-1
so has part: feature:476241-476377:-1:exon
so has part: feature:473403-473521:-1:exon
so has part: feature:472478-472602:-1:exon
so has part: feature:470560-470666:-1:exon
so has part: feature:469799-469989:-1:exon
so has part: feature:469301-469384:-1:exon
so has part: feature:468735-468998:-1:exon
so has part: feature:467937-468170:-1:exon
so has part: feature:466685-466819:-1:exon
so has part: feature:462639-462786:-1:exon
so has part: feature:462202-462355:-1:exon
so has part: feature:460798-461049:-1:exon
so has part: feature:460570-460698:-1:exon
so has part: feature:459627-459749:-1:exon
so has part: feature:459051-459125:-1:exon
so has part: feature:458778-458942:-1:exon
so has part: feature:458257-458361:-1:exon
so has part: feature:457972-458163:-1:exon
so has part: feature:457620-457706:-1:exon
so has part: feature:457043-457153:-1:exon
so has part: feature:453465-456428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476241-476377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473403-473521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472478-472602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470560-470666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469799-469989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:469301-469384:-1:exon

position:469301:-1
position: 469301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469384:-1
position: 469384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:468735-468998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:467937-468170:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:466685-466819:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462639-462786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:462202-462355:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460798-461049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460570-460698:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459627-459749:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459051-459125:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:458778-458942:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:458257-458361:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457972-458163:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457620-457706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457043-457153:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453465-456428:-1:exon

RBM27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RBM27
product: RNA binding motif protein 27, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032124971.1
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(453465..456428,457043..457153,457620..457706,457972..458163,458257..458361,458778..458942,459051..459125,459627..459749,460570..460698,460798..461049,462202..462355,462639..462786,464567..464716,466685..466819,467937..468170,468735..468998,469301..469384,469799..469989,470560..470666,472478..472602,473403..473521,476241..476377))
location: region:453465-476377:-1
so has part: feature:476241-476377:-1:exon
so has part: feature:473403-473521:-1:exon
so has part: feature:472478-472602:-1:exon
so has part: feature:470560-470666:-1:exon
so has part: feature:469799-469989:-1:exon
so has part: feature:469301-469384:-1:exon
so has part: feature:468735-468998:-1:exon
so has part: feature:467937-468170:-1:exon
so has part: feature:466685-466819:-1:exon
so has part: feature:464567-464716:-1:exon
so has part: feature:462639-462786:-1:exon
so has part: feature:462202-462355:-1:exon
so has part: feature:460798-461049:-1:exon
so has part: feature:460570-460698:-1:exon
so has part: feature:459627-459749:-1:exon
so has part: feature:459051-459125:-1:exon
so has part: feature:458778-458942:-1:exon
so has part: feature:458257-458361:-1:exon
so has part: feature:457972-458163:-1:exon
so has part: feature:457620-457706:-1:exon
so has part: feature:457043-457153:-1:exon
so has part: feature:453465-456428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476241-476377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473403-473521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472478-472602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470560-470666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469799-469989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:469301-469384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468735-468998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:467937-468170:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:466685-466819:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:464567-464716:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:462639-462786:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:462202-462355:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460798-461049:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460570-460698:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459627-459749:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:459051-459125:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:458778-458942:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:458257-458361:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457972-458163:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457620-457706:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457043-457153:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:453465-456428:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X2
translation: MIIESVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSAEPTKAEAKAAGQEKEEVKEELCVKQSFQESVEEERESRKKKYSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYREKSGWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDGSRSEHRERERSKYKSEKNDVEGSYNPVSASPSKSSEQYSSAQAIPNAVTVVAPAHHLESTTESWSNFFNNHNNPSSFGRNPPPKRRCQDYDERGYCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPLPGPMRGLRLPVPQPHPQPPPPVVLPVPRPPLTQSSLINSRDQPGTSAVPSLAPIGARLPPPLPQNLLYTVSEHTYEPDGYNPEAPSITSAGRSQYRQFFTRAQMQRPNLIGLTSGEMDTNPRAANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQVNNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLSNDEARKAISSTEAVLSNRFIRVLWHRESEQQPPVLQQQPPPTPQALQHLQQQALATPPAVTMHSSLSKVMNKPLASGAYVLNKVPVKRRLGAAGGSQPELSQPGAGVEESQIFPTSTSHSKMLYSSPNLKTTLKSGAGSKPHDVQEALKKKQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELTGKISQLKDELKTSSTTSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTASAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVVTFKSRSEAENAANQGSRFKDRRLQISWHKPKVPSVSTEVEEEESKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(456342..456428,457043..457153,457620..457706,457972..458163,458257..458361,458778..458942,459051..459125,459627..459749,460570..460698,460798..461049,462202..462355,462639..462786,464567..464716,466685..466819,467937..468170,468735..468998,469799..469989,470560..470666,472478..472602,473403..473521,476241..476299))
location: region:456342-476299:-1
so has part: feature:476241-476299:-1:exon
so has part: feature:473403-473521:-1:exon
so has part: feature:472478-472602:-1:exon
so has part: feature:470560-470666:-1:exon
so has part: feature:469799-469989:-1:exon
so has part: feature:468735-468998:-1:exon
so has part: feature:467937-468170:-1:exon
so has part: feature:466685-466819:-1:exon
so has part: feature:464567-464716:-1:exon
so has part: feature:462639-462786:-1:exon
so has part: feature:462202-462355:-1:exon
so has part: feature:460798-461049:-1:exon
so has part: feature:460570-460698:-1:exon
so has part: feature:459627-459749:-1:exon
so has part: feature:459051-459125:-1:exon
so has part: feature:458778-458942:-1:exon
so has part: feature:458257-458361:-1:exon
so has part: feature:457972-458163:-1:exon
so has part: feature:457620-457706:-1:exon
so has part: feature:457043-457153:-1:exon
so has part: feature:456342-456428:-1:exon

XP_031980863.1
type: Protein
SIO_000068: ncbiprotein

position:456342:-1
position: 456342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476299:-1
position: 476299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476241-476299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473403-473521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472478-472602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470560-470666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469799-469989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468735-468998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:467937-468170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466685-466819:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464567-464716:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462639-462786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:462202-462355:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460798-461049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460570-460698:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459627-459749:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459051-459125:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:458778-458942:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:458257-458361:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457972-458163:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457620-457706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457043-457153:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:456342-456428:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X3
translation: MIIESVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSAEPTKAEAKAAGQEKEEVKEELCVKQSFQESVEEERESRKKKYSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYREKSGWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDGSRSGLVQVCRKSKWHRLQHSTHLETALVKGREHRERERSKYKSEKNDVEGSYNPVSASPSKSSEQYSSAQAIPNAVTVVAPAHHLESTTESWSNFFNNHNNPSSFGRNPPPKRRCQDYDERGYCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPLPGPMRGLRLPVPQPHPQPPPPVVLPVPRPPLTQSSLINSRDQPGTSAVPSLAPIGARLPPPLPQNLLYTVSEPANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQVNNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLSNDEARKAISSTEAVLSNRFIRVLWHRESEQQPPVLQQQPPPTPQALQHLQQQALATPPAVTMHSSLSKVMNKPLASGAYVLNKVPVKRRLGAAGGSQPELSQPGAGVEESQIFPTSTSHSKMLYSSPNLKTTLKSGAGSKPHDVQEALKKKQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELTGKISQLKDELKTSSTTSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTASAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVVTFKSRSEAENAANQGSRFKDRRLQISWHKPKVPSVSTEVEEEESKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(456342..456428,457043..457153,457620..457706,457972..458163,458257..458361,458778..458942,459051..459125,459627..459749,460570..460698,460798..461049,462202..462355,462639..462786,466685..466819,467937..468170,468735..468998,469301..469384,469799..469989,470560..470666,472478..472602,473403..473521,476241..476299))
location: region:456342-476299:-1
so has part: feature:476241-476299:-1:exon
so has part: feature:473403-473521:-1:exon
so has part: feature:472478-472602:-1:exon
so has part: feature:470560-470666:-1:exon
so has part: feature:469799-469989:-1:exon
so has part: feature:469301-469384:-1:exon
so has part: feature:468735-468998:-1:exon
so has part: feature:467937-468170:-1:exon
so has part: feature:466685-466819:-1:exon
so has part: feature:462639-462786:-1:exon
so has part: feature:462202-462355:-1:exon
so has part: feature:460798-461049:-1:exon
so has part: feature:460570-460698:-1:exon
so has part: feature:459627-459749:-1:exon
so has part: feature:459051-459125:-1:exon
so has part: feature:458778-458942:-1:exon
so has part: feature:458257-458361:-1:exon
so has part: feature:457972-458163:-1:exon
so has part: feature:457620-457706:-1:exon
so has part: feature:457043-457153:-1:exon
so has part: feature:456342-456428:-1:exon

XP_031980864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476241-476299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473403-473521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472478-472602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470560-470666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469799-469989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:469301-469384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468735-468998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:467937-468170:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:466685-466819:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462639-462786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:462202-462355:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460798-461049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460570-460698:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459627-459749:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459051-459125:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:458778-458942:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:458257-458361:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457972-458163:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457620-457706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457043-457153:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:456342-456428:-1:exon

RBM27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RBM27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 27 isoform X1
translation: MIIESVDALKSWLAKLLEPICDADPSALANYVVALVKKDKPEKELKAFCADQLDVFLQKETSGFVDKLFESLYTKSYLPSAEPTKAEAKAAGQEKEEVKEELCVKQSFQESVEEERESRKKKYSSPQRSRADSSEQRTREKKRDDGKWRDYDRYYDRSDLYREKSGWRRGRSKSRSKSRGLSRSRSRSRGRSKDRDGSRSGLVQVCRKSKWHRLQHSTHLETALVKGREHRERERSKYKSEKNDVEGSYNPVSASPSKSSEQYSSAQAIPNAVTVVAPAHHLESTTESWSNFFNNHNNPSSFGRNPPPKRRCQDYDERGYCVLGDLCQFDHGNDPLVVDEVSLPSMIPFPPPPPGLPPPPGMLLPPLPGPMRGLRLPVPQPHPQPPPPVVLPVPRPPLTQSSLINSRDQPGTSAVPSLAPIGARLPPPLPQNLLYTVSEHTYEPDGYNPEAPSITSAGRSQYRQFFTRAQMQRPNLIGLTSGEMDTNPRAANIIIQTEPPIPITNNSSNVTRVVLEPDSRKRSPSSMECPPLKKPWLGKQVNNNQNKPGFLKKNQYTNTKLEVRKIPPELNNITQLNEHFSKFGTIVNIQVAFQNDPEAALIQYLSNDEARKAISSTEAVLSNRFIRVLWHRESEQQPPVLQQQPPPTPQALQHLQQQALATPPAVTMHSSLSKVMNKPLASGAYVLNKVPVKRRLGAAGGSQPELSQPGAGVEESQIFPTSTSHSKMLYSSPNLKTTLKSGAGSKPHDVQEALKKKQEAMKLQQDMRKKKQEMLEKQIECQKMLISKLEKNKAMKPEERAEIMKTLKELTGKISQLKDELKTSSTTSTPSKLKSKTEAQKELLDAELDFHKRLSSGEDTTELRKKLNQLQVEAARLGILPVGRGKTASAQGRGRGRGRGGRGRGMLNHMVVDHRPKALTVGGFVEEEKDELLQHFSKFGDIEDLQEEDSPLSVVVTFKSRSEAENAANQGSRFKDRRLQISWHKPKVPSVSTEVEEEESKEEETETSDLFLHEDDDDDDEDEDESRSWRR
SIO_010081: RBM27
subclass of: SO_0000673
so part of: RBM27
location: complement(join(456342..456428,457043..457153,457620..457706,457972..458163,458257..458361,458778..458942,459051..459125,459627..459749,460570..460698,460798..461049,462202..462355,462639..462786,464567..464716,466685..466819,467937..468170,468735..468998,469301..469384,469799..469989,470560..470666,472478..472602,473403..473521,476241..476299))
location: region:456342-476299:-1
so has part: feature:476241-476299:-1:exon
so has part: feature:473403-473521:-1:exon
so has part: feature:472478-472602:-1:exon
so has part: feature:470560-470666:-1:exon
so has part: feature:469799-469989:-1:exon
so has part: feature:469301-469384:-1:exon
so has part: feature:468735-468998:-1:exon
so has part: feature:467937-468170:-1:exon
so has part: feature:466685-466819:-1:exon
so has part: feature:464567-464716:-1:exon
so has part: feature:462639-462786:-1:exon
so has part: feature:462202-462355:-1:exon
so has part: feature:460798-461049:-1:exon
so has part: feature:460570-460698:-1:exon
so has part: feature:459627-459749:-1:exon
so has part: feature:459051-459125:-1:exon
so has part: feature:458778-458942:-1:exon
so has part: feature:458257-458361:-1:exon
so has part: feature:457972-458163:-1:exon
so has part: feature:457620-457706:-1:exon
so has part: feature:457043-457153:-1:exon
so has part: feature:456342-456428:-1:exon

XP_031980862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476241-476299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473403-473521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472478-472602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470560-470666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469799-469989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:469301-469384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468735-468998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:467937-468170:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:466685-466819:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:464567-464716:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:462639-462786:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:462202-462355:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:460798-461049:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:460570-460698:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459627-459749:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:459051-459125:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:458778-458942:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:458257-458361:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457972-458163:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457620-457706:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457043-457153:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:456342-456428:-1:exon

LARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 476579..502697
location: region:476579-502697:1
so has part: feature:476579-502697:1:exon
subclass of: SO_0000010

116451348
type: Gene
SIO_000068: ncbigene

position:476579:1
position: 476579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502697:1
position: 502697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476579-502697:1:exon

LARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LARS1
product: leucyl-tRNA synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_032124671.1
SIO_010081: LARS1
subclass of: SO_0000673
so part of: LARS1
location: join(476579..476798,477687..477805,479710..479797,480426..480506,480946..481086,481505..481666,482333..482445,482842..482905,483440..483507,483907..484132,485214..485301,485390..485466,486118..486171,486848..486988,487746..487823,488744..488829,488920..488985,489079..489161,489791..489929,491948..492160,493023..493080,493808..493871,494474..494657,494874..494964,495808..495948,496500..496640,496722..496832,497677..497787,501038..501133,501505..501637,502315..502697)
location: region:476579-502697:1
so has part: feature:476579-476798:1:exon
so has part: feature:477687-477805:1:exon
so has part: feature:479710-479797:1:exon
so has part: feature:480426-480506:1:exon
so has part: feature:480946-481086:1:exon
so has part: feature:481505-481666:1:exon
so has part: feature:482333-482445:1:exon
so has part: feature:482842-482905:1:exon
so has part: feature:483440-483507:1:exon
so has part: feature:483907-484132:1:exon
so has part: feature:485214-485301:1:exon
so has part: feature:485390-485466:1:exon
so has part: feature:486118-486171:1:exon
so has part: feature:486848-486988:1:exon
so has part: feature:487746-487823:1:exon
so has part: feature:488744-488829:1:exon
so has part: feature:488920-488985:1:exon
so has part: feature:489079-489161:1:exon
so has part: feature:489791-489929:1:exon
so has part: feature:491948-492160:1:exon
so has part: feature:493023-493080:1:exon
so has part: feature:493808-493871:1:exon
so has part: feature:494474-494657:1:exon
so has part: feature:494874-494964:1:exon
so has part: feature:495808-495948:1:exon
so has part: feature:496500-496640:1:exon
so has part: feature:496722-496832:1:exon
so has part: feature:497677-497787:1:exon
so has part: feature:501038-501133:1:exon
so has part: feature:501505-501637:1:exon
so has part: feature:502315-502697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476579-476798:1:exon

position:476798:1
position: 476798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477687-477805:1:exon

position:477687:1
position: 477687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477805:1
position: 477805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479710-479797:1:exon

position:479710:1
position: 479710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479797:1
position: 479797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:480426-480506:1:exon

position:480426:1
position: 480426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480506:1
position: 480506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480946-481086:1:exon

position:480946:1
position: 480946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481086:1
position: 481086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:481505-481666:1:exon

position:481505:1
position: 481505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481666:1
position: 481666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:482333-482445:1:exon

position:482333:1
position: 482333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482445:1
position: 482445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:482842-482905:1:exon

position:482842:1
position: 482842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482905:1
position: 482905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:483440-483507:1:exon

position:483440:1
position: 483440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483507:1
position: 483507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:483907-484132:1:exon

position:483907:1
position: 483907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484132:1
position: 484132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:485214-485301:1:exon

position:485214:1
position: 485214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485301:1
position: 485301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:485390-485466:1:exon

position:485390:1
position: 485390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485466:1
position: 485466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:486118-486171:1:exon

position:486118:1
position: 486118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486171:1
position: 486171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:486848-486988:1:exon

position:486848:1
position: 486848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486988:1
position: 486988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:487746-487823:1:exon

position:487746:1
position: 487746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487823:1
position: 487823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:488744-488829:1:exon

position:488744:1
position: 488744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488829:1
position: 488829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:488920-488985:1:exon

position:488920:1
position: 488920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488985:1
position: 488985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:489079-489161:1:exon

position:489079:1
position: 489079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489161:1
position: 489161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:489791-489929:1:exon

position:489791:1
position: 489791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489929:1
position: 489929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:491948-492160:1:exon

position:491948:1
position: 491948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492160:1
position: 492160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:493023-493080:1:exon

position:493023:1
position: 493023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493080:1
position: 493080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:493808-493871:1:exon

position:493808:1
position: 493808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493871:1
position: 493871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:494474-494657:1:exon

position:494474:1
position: 494474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494657:1
position: 494657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:494874-494964:1:exon

position:494874:1
position: 494874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494964:1
position: 494964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:495808-495948:1:exon

position:495808:1
position: 495808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495948:1
position: 495948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:496500-496640:1:exon

position:496500:1
position: 496500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496640:1
position: 496640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:496722-496832:1:exon

position:496722:1
position: 496722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496832:1
position: 496832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:497677-497787:1:exon

position:497677:1
position: 497677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497787:1
position: 497787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:501038-501133:1:exon

position:501038:1
position: 501038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501133:1
position: 501133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:501505-501637:1:exon

position:501505:1
position: 501505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501637:1
position: 501637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:502315-502697:1:exon

position:502315:1
position: 502315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LARS1
product: leucyl-tRNA synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 129 samples with support for all annotated introns
transcript id: XM_032124670.1
SIO_010081: LARS1
subclass of: SO_0000673
so part of: LARS1
location: join(476581..476798,477687..477805,479710..479797,480426..480506,480946..481086,481505..481666,482333..482445,482842..482905,483440..483507,483907..484132,485214..485301,485390..485466,486118..486171,486848..486988,487746..487823,488744..488829,488920..488985,489079..489161,489791..489929,491948..492160,493023..493080,493808..493871,494474..494657,494874..494964,495808..495948,496500..496640,496722..496832,497677..497787,499803..499907,501038..501133,501505..501637,502315..502697)
location: region:476581-502697:1
so has part: feature:476581-476798:1:exon
so has part: feature:477687-477805:1:exon
so has part: feature:479710-479797:1:exon
so has part: feature:480426-480506:1:exon
so has part: feature:480946-481086:1:exon
so has part: feature:481505-481666:1:exon
so has part: feature:482333-482445:1:exon
so has part: feature:482842-482905:1:exon
so has part: feature:483440-483507:1:exon
so has part: feature:483907-484132:1:exon
so has part: feature:485214-485301:1:exon
so has part: feature:485390-485466:1:exon
so has part: feature:486118-486171:1:exon
so has part: feature:486848-486988:1:exon
so has part: feature:487746-487823:1:exon
so has part: feature:488744-488829:1:exon
so has part: feature:488920-488985:1:exon
so has part: feature:489079-489161:1:exon
so has part: feature:489791-489929:1:exon
so has part: feature:491948-492160:1:exon
so has part: feature:493023-493080:1:exon
so has part: feature:493808-493871:1:exon
so has part: feature:494474-494657:1:exon
so has part: feature:494874-494964:1:exon
so has part: feature:495808-495948:1:exon
so has part: feature:496500-496640:1:exon
so has part: feature:496722-496832:1:exon
so has part: feature:497677-497787:1:exon
so has part: feature:499803-499907:1:exon
so has part: feature:501038-501133:1:exon
so has part: feature:501505-501637:1:exon
so has part: feature:502315-502697:1:exon

position:476581:1
position: 476581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476581-476798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477687-477805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479710-479797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480426-480506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480946-481086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481505-481666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482333-482445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482842-482905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:483440-483507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483907-484132:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:485214-485301:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:485390-485466:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486118-486171:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486848-486988:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:487746-487823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488744-488829:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488920-488985:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489079-489161:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:489791-489929:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:491948-492160:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:493023-493080:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:493808-493871:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:494474-494657:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:494874-494964:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:495808-495948:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:496500-496640:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:496722-496832:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:497677-497787:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:499803-499907:1:exon

position:499803:1
position: 499803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499907:1
position: 499907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:501038-501133:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:501505-501637:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:502315-502697:1:exon

LARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine--tRNA ligase, cytoplasmic isoform X1
translation: MAERKGTAKVDFLKKIEREIQQKWDHDRVFEINAADRRDQRSKGKYFVTFPYPYMNGRLHLGHTFSLSKCEFAVGYQRLKGRSCLFPFGLHCTGMPIKACADKLKREMELYGCPPEFPDEEEEEEENSGKKEEEIIIKDKAKGKKSKAAAKTGSSKYQWGIMKSLGLSDEEVVSFSEAEHWLDYFPPLAVQDLKSMGLKVDWRRSFITTNVNPYYDSFVRWQFLTLKERNKIKFGKRYTIYSPKDGQPCMDHDRQTGEGVGPQEYTLIKMKVLDPYPAKLSGLRGKNIFLVAATLRPETMFGQTNCWLRPDMKYIGFETGNGDIFICTQRAARNMSYQGFTKDNGVVPVVKELMGEEILGAALSAPLTTYKVIYALPMLTIKEDKGTGVVTSVPSDSPDDFAALRDLKKKQALRVKYGIRDEMVLPFEPVPIIEIPGYGSLCAPFVCDELKIQSQNDREKLAEAKERVYLKGFYEGVMLVDEFKGQKVQDVKKRIQKLMLDKGEAMIYMEPEKQVISRSADECVVALCDQWYLDYGEVSWKKQASECLKHLETFCEETRRNFEATLGWLQEHACSRTYGLGSRLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGNLRGQGESPLGIRAHQMSKEVWDYIFFKTAPFPKTEIPKEKLDKLKEEFEFWYPVDLRVSGKDLVPNHLSYYLYNHVAMWSEQREKWPVAVRANGHLLLNSEKMSKSTGNFLTLTQAVDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMIANRDSLRSGPASTFNDRVFASEMNAGIMKTDQNYEKMMFKEALKTGFFEFQAAKDKYRELAIEGMHRELVFQFIEVQTLLLAPICPHLCEHIWSLLGKPDSIMRASWPAAGPMDEVLIRSSQYLMEAAHDLRLRLKSYMAPVKGKKSAKEPSQKPSHCTIYVAKNYPPWQHTTLSILRKHFQASGGQLPDNKVIASELNTLPELKKYMKKVMPFVAMVKENLEKSGSRVLDLELEFDERAVLMENIVYLTNSLELDHIEVKFASEAEDKIKEDCCPGKPFSIFRTEPGVSVFLVNPQPSNGHFSTKMDIRQGDNRETVIRRLMKMDRGIKDLSKVKLMRFDDPVLGPRRVPVLGKEEAGKTPILEQAIFHIDLAQRHVCVTENGLTRDIGDTIVYLVH
SIO_010081: LARS1
subclass of: SO_0000673
so part of: LARS1
location: join(476793..476798,477687..477805,479710..479797,480426..480506,480946..481086,481505..481666,482333..482445,482842..482905,483440..483507,483907..484132,485214..485301,485390..485466,486118..486171,486848..486988,487746..487823,488744..488829,488920..488985,489079..489161,489791..489929,491948..492160,493023..493080,493808..493871,494474..494657,494874..494964,495808..495948,496500..496640,496722..496832,497677..497787,499803..499907,501038..501133,501505..501637,502315..502520)
location: region:476793-502520:1
so has part: feature:476793-476798:1:exon
so has part: feature:477687-477805:1:exon
so has part: feature:479710-479797:1:exon
so has part: feature:480426-480506:1:exon
so has part: feature:480946-481086:1:exon
so has part: feature:481505-481666:1:exon
so has part: feature:482333-482445:1:exon
so has part: feature:482842-482905:1:exon
so has part: feature:483440-483507:1:exon
so has part: feature:483907-484132:1:exon
so has part: feature:485214-485301:1:exon
so has part: feature:485390-485466:1:exon
so has part: feature:486118-486171:1:exon
so has part: feature:486848-486988:1:exon
so has part: feature:487746-487823:1:exon
so has part: feature:488744-488829:1:exon
so has part: feature:488920-488985:1:exon
so has part: feature:489079-489161:1:exon
so has part: feature:489791-489929:1:exon
so has part: feature:491948-492160:1:exon
so has part: feature:493023-493080:1:exon
so has part: feature:493808-493871:1:exon
so has part: feature:494474-494657:1:exon
so has part: feature:494874-494964:1:exon
so has part: feature:495808-495948:1:exon
so has part: feature:496500-496640:1:exon
so has part: feature:496722-496832:1:exon
so has part: feature:497677-497787:1:exon
so has part: feature:499803-499907:1:exon
so has part: feature:501038-501133:1:exon
so has part: feature:501505-501637:1:exon
so has part: feature:502315-502520:1:exon

XP_031980561.1
type: Protein
SIO_000068: ncbiprotein

position:476793:1
position: 476793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502520:1
position: 502520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476793-476798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477687-477805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479710-479797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480426-480506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480946-481086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481505-481666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482333-482445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482842-482905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:483440-483507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483907-484132:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:485214-485301:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:485390-485466:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486118-486171:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486848-486988:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:487746-487823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488744-488829:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488920-488985:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489079-489161:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:489791-489929:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:491948-492160:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:493023-493080:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:493808-493871:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:494474-494657:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:494874-494964:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:495808-495948:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:496500-496640:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:496722-496832:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:497677-497787:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:499803-499907:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:501038-501133:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:501505-501637:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:502315-502520:1:exon

LARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine--tRNA ligase, cytoplasmic isoform X2
translation: MAERKGTAKVDFLKKIEREIQQKWDHDRVFEINAADRRDQRSKGKYFVTFPYPYMNGRLHLGHTFSLSKCEFAVGYQRLKGRSCLFPFGLHCTGMPIKACADKLKREMELYGCPPEFPDEEEEEEENSGKKEEEIIIKDKAKGKKSKAAAKTGSSKYQWGIMKSLGLSDEEVVSFSEAEHWLDYFPPLAVQDLKSMGLKVDWRRSFITTNVNPYYDSFVRWQFLTLKERNKIKFGKRYTIYSPKDGQPCMDHDRQTGEGVGPQEYTLIKMKVLDPYPAKLSGLRGKNIFLVAATLRPETMFGQTNCWLRPDMKYIGFETGNGDIFICTQRAARNMSYQGFTKDNGVVPVVKELMGEEILGAALSAPLTTYKVIYALPMLTIKEDKGTGVVTSVPSDSPDDFAALRDLKKKQALRVKYGIRDEMVLPFEPVPIIEIPGYGSLCAPFVCDELKIQSQNDREKLAEAKERVYLKGFYEGVMLVDEFKGQKVQDVKKRIQKLMLDKGEAMIYMEPEKQVISRSADECVVALCDQWYLDYGEVSWKKQASECLKHLETFCEETRRNFEATLGWLQEHACSRTYGLGSRLPWDEQWLIESLSDSTIYMAYYTVAHLLQGGNLRGQGESPLGIRAHQMSKEVWDYIFFKTAPFPKTEIPKEKLDKLKEEFEFWYPVDLRVSGKDLVPNHLSYYLYNHVAMWSEQREKWPVAVRANGHLLLNSEKMSKSTGNFLTLTQAVDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMIANRDSLRSGPASTFNDRVFASEMNAGIMKTDQNYEKMMFKEALKTGFFEFQAAKDKYRELAIEGMHRELVFQFIEVQTLLLAPICPHLCEHIWSLLGKPDSIMRASWPAAGPMDEVLIRSSQYLMEAAHDLRLRLKSYMAPVKGKKSAKEPSQKPSHCTIYVAKNYPPWQHTTLSILRKHFQASGGQLPDNKVIASELNTLPELKKYMKKVMPFVAMVKLDHIEVKFASEAEDKIKEDCCPGKPFSIFRTEPGVSVFLVNPQPSNGHFSTKMDIRQGDNRETVIRRLMKMDRGIKDLSKVKLMRFDDPVLGPRRVPVLGKEEAGKTPILEQAIFHIDLAQRHVCVTENGLTRDIGDTIVYLVH
SIO_010081: LARS1
subclass of: SO_0000673
so part of: LARS1
location: join(476793..476798,477687..477805,479710..479797,480426..480506,480946..481086,481505..481666,482333..482445,482842..482905,483440..483507,483907..484132,485214..485301,485390..485466,486118..486171,486848..486988,487746..487823,488744..488829,488920..488985,489079..489161,489791..489929,491948..492160,493023..493080,493808..493871,494474..494657,494874..494964,495808..495948,496500..496640,496722..496832,497677..497787,501038..501133,501505..501637,502315..502520)
location: region:476793-502520:1
so has part: feature:476793-476798:1:exon
so has part: feature:477687-477805:1:exon
so has part: feature:479710-479797:1:exon
so has part: feature:480426-480506:1:exon
so has part: feature:480946-481086:1:exon
so has part: feature:481505-481666:1:exon
so has part: feature:482333-482445:1:exon
so has part: feature:482842-482905:1:exon
so has part: feature:483440-483507:1:exon
so has part: feature:483907-484132:1:exon
so has part: feature:485214-485301:1:exon
so has part: feature:485390-485466:1:exon
so has part: feature:486118-486171:1:exon
so has part: feature:486848-486988:1:exon
so has part: feature:487746-487823:1:exon
so has part: feature:488744-488829:1:exon
so has part: feature:488920-488985:1:exon
so has part: feature:489079-489161:1:exon
so has part: feature:489791-489929:1:exon
so has part: feature:491948-492160:1:exon
so has part: feature:493023-493080:1:exon
so has part: feature:493808-493871:1:exon
so has part: feature:494474-494657:1:exon
so has part: feature:494874-494964:1:exon
so has part: feature:495808-495948:1:exon
so has part: feature:496500-496640:1:exon
so has part: feature:496722-496832:1:exon
so has part: feature:497677-497787:1:exon
so has part: feature:501038-501133:1:exon
so has part: feature:501505-501637:1:exon
so has part: feature:502315-502520:1:exon

XP_031980562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476793-476798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477687-477805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479710-479797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480426-480506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480946-481086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481505-481666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:482333-482445:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:482842-482905:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:483440-483507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:483907-484132:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:485214-485301:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:485390-485466:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486118-486171:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486848-486988:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:487746-487823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488744-488829:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:488920-488985:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489079-489161:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:489791-489929:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:491948-492160:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:493023-493080:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:493808-493871:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:494474-494657:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:494874-494964:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:495808-495948:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:496500-496640:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:496722-496832:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:497677-497787:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:501038-501133:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:501505-501637:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:502315-502520:1:exon

SH3RF2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SH3RF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(504502..530217)
location: region:504502-530217:-1
so has part: feature:504502-530217:-1:exon
subclass of: SO_0000010

116451349
type: Gene
SIO_000068: ncbigene

position:504502:-1
position: 504502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530217:-1
position: 530217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504502-530217:-1:exon

SH3RF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SH3RF2
product: SH3 domain containing ring finger 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032124672.1
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(504502..508605,509491..509852,510310..510524,510708..510878,512831..512920,516059..516389,518136..518393,529074..530217))
location: region:504502-530217:-1
so has part: feature:529074-530217:-1:exon
so has part: feature:518136-518393:-1:exon
so has part: feature:516059-516389:-1:exon
so has part: feature:512831-512920:-1:exon
so has part: feature:510708-510878:-1:exon
so has part: feature:510310-510524:-1:exon
so has part: feature:509491-509852:-1:exon
so has part: feature:504502-508605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529074-530217:-1:exon

position:529074:-1
position: 529074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518136-518393:-1:exon

position:518136:-1
position: 518136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518393:-1
position: 518393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516059-516389:-1:exon

position:516059:-1
position: 516059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516389:-1
position: 516389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:512831-512920:-1:exon

position:512831:-1
position: 512831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512920:-1
position: 512920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:510708-510878:-1:exon

position:510708:-1
position: 510708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510878:-1
position: 510878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:510310-510524:-1:exon

position:510310:-1
position: 510310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510524:-1
position: 510524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:509491-509852:-1:exon

position:509491:-1
position: 509491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509852:-1
position: 509852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:504502-508605:-1:exon

position:508605:-1
position: 508605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3RF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SH3RF2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SH3RF2
translation: MDDLALLDLLECPVCFEKLDATAKVLPCQHTFCKPCLQRILKSQKELRCPECRTLVLCSIEQLPSNLLLIRLLDGVRCGQNVTRFGSIQRSGVLSSPASIRRVPRGLQLHQHRLATNPRIHMEGVPRARALYTYRGHSPGELRFNKGDTIVLLRQLDENWYLGEANGTSGVFPASSVQVIKHLPLPRPLYGLDLRSRDKAENKDSLTFHKPSAPTQQLLQATKSHWSPQFKGASLRTASPKAKAADSVAFPKVPDSRRKSLRQFSITTALNTLNRMVHAPADRPALEISSPVLISSSNPTVATQSSEKSSFPYGTPLQVSTSYYPTPAPLGPPAAIVTLPHLQHHGPAYLCVALHSYAAHGPDELELQKGEGVRVFGKDQDGWLRGMSLATGRVGLFPSNYVAPLFRKSSLSDSKMPSLYTSWTLSTSSLSSQGSMSENGPRQSRALKPVLLPVPIPSPGRSAAGPAPLRRGRGSTRKNGSLQRPGQAGTPVQITGSLRRPSAAGRPQHFQLYPHVSSPPYSISPGAGMDEATRPNFSHEASPALLVRGGESRTPSVCSSVILDVKDPPVKSEAAPKPPASAPPSILVKPETSRNSAEKQVKTVRFQNHSPPPPKRHSLQPSPSLLRSRTEPGPEGLLPEAGLGPELLVLYSPRLGSSPLHPRRALHPKALSLDLSGQLTFPIKKSYSSISAN
SIO_010081: SH3RF2
subclass of: SO_0000673
so part of: SH3RF2
location: complement(join(508321..508605,509491..509852,510310..510524,510708..510878,512831..512920,516059..516389,518136..518393,529074..529445))
location: region:508321-529445:-1
so has part: feature:529074-529445:-1:exon
so has part: feature:518136-518393:-1:exon
so has part: feature:516059-516389:-1:exon
so has part: feature:512831-512920:-1:exon
so has part: feature:510708-510878:-1:exon
so has part: feature:510310-510524:-1:exon
so has part: feature:509491-509852:-1:exon
so has part: feature:508321-508605:-1:exon

XP_031980563.1
type: Protein
SIO_000068: ncbiprotein

position:508321:-1
position: 508321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529445:-1
position: 529445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529074-529445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518136-518393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516059-516389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512831-512920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:510708-510878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:510310-510524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:509491-509852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:508321-508605:-1:exon

GRXCR2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: GRXCR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 539753..546075
location: region:539753-546075:1
so has part: feature:539753-546075:1:exon
subclass of: SO_0000010

116451731
type: Gene
SIO_000068: ncbigene

position:539753:1
position: 539753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546075:1
position: 546075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539753-546075:1:exon

GRXCR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: GRXCR2
product: glutaredoxin and cysteine rich domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032125407.1
SIO_010081: GRXCR2
subclass of: SO_0000673
so part of: GRXCR2
location: join(539753..540133,541633..541848,542873..546075)
location: region:539753-546075:1
so has part: feature:539753-540133:1:exon
so has part: feature:541633-541848:1:exon
so has part: feature:542873-546075:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539753-540133:1:exon

position:540133:1
position: 540133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541633-541848:1:exon

position:541633:1
position: 541633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541848:1
position: 541848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:542873-546075:1:exon

position:542873:1
position: 542873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRXCR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: GRXCR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutaredoxin domain-containing cysteine-rich protein 2
translation: MDEPQKKLSQRHEGRPRKVRFKISSAYSGRVLKQVYEDGQELEPPAKEHSRRFLRQSFEPGDHFCGAGEVPENRFYWPTALTAQRISILREDQKHGLAGTSPLLSNCQPDASHCRTSPVVDFGKIIIYTNNLKIIRAPMDQKELMRRIIQTEGINDWTFMCQERKERFSGGHKKDVENKVTCIQHVQEGHAEHGCSQCKGSGCAPCSLCHGSKFSMLANRFRESYRALRCPACNESGLQPCRICAA
SIO_010081: GRXCR2
subclass of: SO_0000673
so part of: GRXCR2
location: join(539789..540133,541633..541848,542873..543052)
location: region:539789-543052:1
so has part: feature:539789-540133:1:exon
so has part: feature:541633-541848:1:exon
so has part: feature:542873-543052:1:exon

XP_031981298.1
type: Protein
SIO_000068: ncbiprotein

position:539789:1
position: 539789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543052:1
position: 543052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539789-540133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541633-541848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542873-543052:1:exon

LOC116451601
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 587397..616250
location: region:587397-616250:1
so has part: feature:587397-616250:1:exon
subclass of: SO_0000011

116451601
type: Gene
SIO_000068: ncbigene

position:587397:1
position: 587397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616250:1
position: 616250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587397-616250:1:exon

LOC116451601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451601
product: uncharacterized LOC116451601, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004243245.1
SIO_010081: LOC116451601
subclass of: SO_0000673
so part of: LOC116451601
location: join(587397..588237,596116..599276,601144..601372,602211..602340,603537..603715,608985..609176,611673..616250)
location: region:587397-616250:1
so has part: feature:587397-588237:1:exon
so has part: feature:596116-599276:1:exon
so has part: feature:601144-601372:1:exon
so has part: feature:602211-602340:1:exon
so has part: feature:603537-603715:1:exon
so has part: feature:608985-609176:1:exon
so has part: feature:611673-616250:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:587397-588237:1:exon

position:588237:1
position: 588237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:596116-599276:1:exon

position:596116:1
position: 596116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599276:1
position: 599276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:601144-601372:1:exon

position:601144:1
position: 601144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601372:1
position: 601372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602211-602340:1:exon

position:602211:1
position: 602211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602340:1
position: 602340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:603537-603715:1:exon

position:603537:1
position: 603537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603715:1
position: 603715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:608985-609176:1:exon

position:608985:1
position: 608985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609176:1
position: 609176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:611673-616250:1:exon

position:611673:1
position: 611673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451601
product: uncharacterized LOC116451601, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004243242.1
SIO_010081: LOC116451601
subclass of: SO_0000673
so part of: LOC116451601
location: join(595251..596345,596874..599276,601144..601372,602211..602340,603537..603715,608985..609176,611673..616250)
location: region:595251-616250:1
so has part: feature:595251-596345:1:exon
so has part: feature:596874-599276:1:exon
so has part: feature:601144-601372:1:exon
so has part: feature:602211-602340:1:exon
so has part: feature:603537-603715:1:exon
so has part: feature:608985-609176:1:exon
so has part: feature:611673-616250:1:exon

position:595251:1
position: 595251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595251-596345:1:exon

position:596345:1
position: 596345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:596874-599276:1:exon

position:596874:1
position: 596874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:601144-601372:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602211-602340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:603537-603715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608985-609176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611673-616250:1:exon

LOC116451601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451601
product: uncharacterized LOC116451601, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004243248.1
SIO_010081: LOC116451601
subclass of: SO_0000673
so part of: LOC116451601
location: join(595264..599276,601144..601372,602211..602340,603537..603715,605960..606167,608985..609176,611673..616250)
location: region:595264-616250:1
so has part: feature:595264-599276:1:exon
so has part: feature:601144-601372:1:exon
so has part: feature:602211-602340:1:exon
so has part: feature:603537-603715:1:exon
so has part: feature:605960-606167:1:exon
so has part: feature:608985-609176:1:exon
so has part: feature:611673-616250:1:exon

position:595264:1
position: 595264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595264-599276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601144-601372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602211-602340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603537-603715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605960-606167:1:exon

position:605960:1
position: 605960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606167:1
position: 606167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:608985-609176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611673-616250:1:exon

LOC116451601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451601
product: uncharacterized LOC116451601, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004243249.1
SIO_010081: LOC116451601
subclass of: SO_0000673
so part of: LOC116451601
location: join(595268..599276,601403..601601,602211..602340,603537..603715,608985..609176,611673..616250)
location: region:595268-616250:1
so has part: feature:595268-599276:1:exon
so has part: feature:601403-601601:1:exon
so has part: feature:602211-602340:1:exon
so has part: feature:603537-603715:1:exon
so has part: feature:608985-609176:1:exon
so has part: feature:611673-616250:1:exon

position:595268:1
position: 595268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595268-599276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601403-601601:1:exon

position:601403:1
position: 601403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601601:1
position: 601601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:602211-602340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603537-603715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608985-609176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611673-616250:1:exon

LOC116451601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451601
product: uncharacterized LOC116451601, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004243243.1
SIO_010081: LOC116451601
subclass of: SO_0000673
so part of: LOC116451601
location: join(595268..596345,596874..596931,599167..599276,601144..601372,602211..602340,603537..603715,608985..609176,611673..616250)
location: region:595268-616250:1
so has part: feature:595268-596345:1:exon
so has part: feature:596874-596931:1:exon
so has part: feature:599167-599276:1:exon
so has part: feature:601144-601372:1:exon
so has part: feature:602211-602340:1:exon
so has part: feature:603537-603715:1:exon
so has part: feature:608985-609176:1:exon
so has part: feature:611673-616250:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:595268-596345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596874-596931:1:exon

position:596931:1
position: 596931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:599167-599276:1:exon

position:599167:1
position: 599167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:601144-601372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602211-602340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603537-603715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608985-609176:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:611673-616250:1:exon

LOC116451601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451601
product: uncharacterized LOC116451601, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004243244.1
SIO_010081: LOC116451601
subclass of: SO_0000673
so part of: LOC116451601
location: join(595269..599276,601144..601372,602211..602340,603537..603715,608985..609176,611673..612335,612470..616250)
location: region:595269-616250:1
so has part: feature:595269-599276:1:exon
so has part: feature:601144-601372:1:exon
so has part: feature:602211-602340:1:exon
so has part: feature:603537-603715:1:exon
so has part: feature:608985-609176:1:exon
so has part: feature:611673-612335:1:exon
so has part: feature:612470-616250:1:exon

position:595269:1
position: 595269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595269-599276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601144-601372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602211-602340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603537-603715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608985-609176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611673-612335:1:exon

position:612335:1
position: 612335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:612470-616250:1:exon

position:612470:1
position: 612470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451601
product: uncharacterized LOC116451601, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004243246.1
SIO_010081: LOC116451601
subclass of: SO_0000673
so part of: LOC116451601
location: join(595270..596345,599167..599276,601144..601372,602211..602340,603537..603715,608985..609176,611673..616250)
location: region:595270-616250:1
so has part: feature:595270-596345:1:exon
so has part: feature:599167-599276:1:exon
so has part: feature:601144-601372:1:exon
so has part: feature:602211-602340:1:exon
so has part: feature:603537-603715:1:exon
so has part: feature:608985-609176:1:exon
so has part: feature:611673-616250:1:exon

position:595270:1
position: 595270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595270-596345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599167-599276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601144-601372:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602211-602340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:603537-603715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608985-609176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611673-616250:1:exon

LOC116451601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451601
product: uncharacterized LOC116451601, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_004243241.1
SIO_010081: LOC116451601
subclass of: SO_0000673
so part of: LOC116451601
location: join(595272..599276,601144..601372,602211..602340,603537..603715,608985..609176,611673..616250)
location: region:595272-616250:1
so has part: feature:595272-599276:1:exon
so has part: feature:601144-601372:1:exon
so has part: feature:602211-602340:1:exon
so has part: feature:603537-603715:1:exon
so has part: feature:608985-609176:1:exon
so has part: feature:611673-616250:1:exon

position:595272:1
position: 595272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595272-599276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601144-601372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602211-602340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603537-603715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608985-609176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:611673-616250:1:exon

LOC116451601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451601
product: uncharacterized LOC116451601, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_004243247.1
SIO_010081: LOC116451601
subclass of: SO_0000673
so part of: LOC116451601
location: join(595272..599276,601144..601372,602211..602340,603537..603715,608985..609176,612105..616250)
location: region:595272-616250:1
so has part: feature:595272-599276:1:exon
so has part: feature:601144-601372:1:exon
so has part: feature:602211-602340:1:exon
so has part: feature:603537-603715:1:exon
so has part: feature:608985-609176:1:exon
so has part: feature:612105-616250:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:595272-599276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601144-601372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602211-602340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603537-603715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608985-609176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:612105-616250:1:exon

position:612105:1
position: 612105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451601
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451601
product: uncharacterized LOC116451601, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004243250.1
SIO_010081: LOC116451601
subclass of: SO_0000673
so part of: LOC116451601
location: join(595273..599276,602211..602340,603537..603715,608985..609176,611673..616250)
location: region:595273-616250:1
so has part: feature:595273-599276:1:exon
so has part: feature:602211-602340:1:exon
so has part: feature:603537-603715:1:exon
so has part: feature:608985-609176:1:exon
so has part: feature:611673-616250:1:exon

position:595273:1
position: 595273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595273-599276:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602211-602340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603537-603715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608985-609176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:611673-616250:1:exon

LOC116451546
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 674079..677394
location: region:674079-677394:1
so has part: feature:674079-677394:1:exon
subclass of: SO_0000011

116451546
type: Gene
SIO_000068: ncbigene

position:674079:1
position: 674079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677394:1
position: 677394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674079-677394:1:exon

LOC116451546
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451546
product: uncharacterized LOC116451546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004243226.1
SIO_010081: LOC116451546
subclass of: SO_0000673
so part of: LOC116451546
location: join(674079..674198,675114..675205,675468..677394)
location: region:674079-677394:1
so has part: feature:674079-674198:1:exon
so has part: feature:675114-675205:1:exon
so has part: feature:675468-677394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:674079-674198:1:exon

position:674198:1
position: 674198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675114-675205:1:exon

position:675114:1
position: 675114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675205:1
position: 675205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:675468-677394:1:exon

position:675468:1
position: 675468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCTD16
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: KCTD16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(703386..767963)
location: region:703386-767963:-1
so has part: feature:703386-767963:-1:exon
subclass of: SO_0000010

116451501
type: Gene
SIO_000068: ncbigene

position:703386:-1
position: 703386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767963:-1
position: 767963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703386-767963:-1:exon

KCTD16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: KCTD16
product: potassium channel tetramerization domain containing 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_032125037.1
SIO_010081: KCTD16
subclass of: SO_0000673
so part of: KCTD16
location: complement(join(703386..711385,766119..767259,767529..767963))
location: region:703386-767963:-1
so has part: feature:767529-767963:-1:exon
so has part: feature:766119-767259:-1:exon
so has part: feature:703386-711385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:767529-767963:-1:exon

position:767529:-1
position: 767529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766119-767259:-1:exon

position:766119:-1
position: 766119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767259:-1
position: 767259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:703386-711385:-1:exon

position:711385:-1
position: 711385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCTD16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: KCTD16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD16
translation: MALSGNCRTYLPPREQGTGLHSFPEVVELNVGGQVYFTRHSTLVGTPHSLLWKMFTPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDKQVVLPDHFPEKGRLKREAEYFQLPDLVKLLTPDDNKQSPDDYCHSDYEEASQGSDTRICPPSLLPPDRKWGFITIGYRGSCTIGRESQADAKFRRVPRILVCGRISLVKEVFGESLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFVNQYTDDKVWSSYTEYVFYREPSRWSSSHCDCCCKNGKGDKEGESGTSCNELSTSSCDSQSEASSPQETVICGPVTRQPNIQTLDRPAKKGPVQLLQQSEIRRKSDLLRTLTSGSRESNSSKKKAVKEKLSIEEELEKCIQDFLKIKIPDRFPERKHPWQSELLRKYHL
SIO_010081: KCTD16
subclass of: SO_0000673
so part of: KCTD16
location: complement(join(710934..711385,766119..766947))
location: region:710934-766947:-1
so has part: feature:766119-766947:-1:exon
so has part: feature:710934-711385:-1:exon

XP_031980928.1
type: Protein
SIO_000068: ncbiprotein

position:710934:-1
position: 710934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766947:-1
position: 766947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766119-766947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:710934-711385:-1:exon

YIPF5
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 775178..781600
location: region:775178-781600:1
so has part: feature:775178-781600:1:exon
subclass of: SO_0000010

116451550
type: Gene
SIO_000068: ncbigene

position:775178:1
position: 775178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781600:1
position: 781600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775178-781600:1:exon

YIPF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: YIPF5
product: Yip1 domain family member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032125140.1
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(775178..775289,775534..775642,776815..776987,777897..778042,779565..779746,780569..781600)
location: region:775178-781600:1
so has part: feature:775178-775289:1:exon
so has part: feature:775534-775642:1:exon
so has part: feature:776815-776987:1:exon
so has part: feature:777897-778042:1:exon
so has part: feature:779565-779746:1:exon
so has part: feature:780569-781600:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:775178-775289:1:exon

position:775289:1
position: 775289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:775534-775642:1:exon

position:775534:1
position: 775534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775642:1
position: 775642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:776815-776987:1:exon

position:776815:1
position: 776815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776987:1
position: 776987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777897-778042:1:exon

position:777897:1
position: 777897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778042:1
position: 778042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:779565-779746:1:exon

position:779565:1
position: 779565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779746:1
position: 779746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:780569-781600:1:exon

position:780569:1
position: 780569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YIPF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF5 isoform X1
translation: MSGFDSFNTEFFQTSYSIEDQAQPYDYSGRPYSKHYGGYEYPQQGGFVPPDMMQHQQPYTGQIYQPPQSYTPASAQSFYGSNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAIVFSLQGMMGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(775542..775642,776815..776987,777897..778042,779565..779746,780569..780731)
location: region:775542-780731:1
so has part: feature:775542-775642:1:exon
so has part: feature:776815-776987:1:exon
so has part: feature:777897-778042:1:exon
so has part: feature:779565-779746:1:exon
so has part: feature:780569-780731:1:exon

XP_031981031.1
type: Protein
SIO_000068: ncbiprotein

position:775542:1
position: 775542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780731:1
position: 780731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775542-775642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776815-776987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777897-778042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779565-779746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780569-780731:1:exon

YIPF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: YIPF5
product: Yip1 domain family member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_032125141.1
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(775574..775642,776761..776987,777897..778042,779565..779746,780569..781600)
location: region:775574-781600:1
so has part: feature:775574-775642:1:exon
so has part: feature:776761-776987:1:exon
so has part: feature:777897-778042:1:exon
so has part: feature:779565-779746:1:exon
so has part: feature:780569-781600:1:exon

position:775574:1
position: 775574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775574-775642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:776761-776987:1:exon

position:776761:1
position: 776761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:777897-778042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779565-779746:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:780569-781600:1:exon

YIPF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF5 isoform X2
translation: MMQHQQPYTGQIYQPPQSYTPASAQSFYGSNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAIVFSLQGMMGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(776867..776987,777897..778042,779565..779746,780569..780731)
location: region:776867-780731:1
so has part: feature:776867-776987:1:exon
so has part: feature:777897-778042:1:exon
so has part: feature:779565-779746:1:exon
so has part: feature:780569-780731:1:exon

XP_031981032.1
type: Protein
SIO_000068: ncbiprotein

position:776867:1
position: 776867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776867-776987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:777897-778042:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779565-779746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:780569-780731:1:exon

NR3C1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 889466..950677
location: region:889466-950677:1
so has part: feature:889466-950677:1:exon
subclass of: SO_0000010

116451318
type: Gene
SIO_000068: ncbigene

position:889466:1
position: 889466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950677:1
position: 950677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889466-950677:1:exon

NR3C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NR3C1
product: nuclear receptor subfamily 3 group C member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 ESTs, 63 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XM_032124594.1
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(889466..889686,891620..892808,925673..925836,929773..929889,934533..934811,937260..937404,942515..942645,945409..945566,946417..950677)
location: region:889466-950677:1
so has part: feature:889466-889686:1:exon
so has part: feature:891620-892808:1:exon
so has part: feature:925673-925836:1:exon
so has part: feature:929773-929889:1:exon
so has part: feature:934533-934811:1:exon
so has part: feature:937260-937404:1:exon
so has part: feature:942515-942645:1:exon
so has part: feature:945409-945566:1:exon
so has part: feature:946417-950677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:889466-889686:1:exon

position:889686:1
position: 889686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891620-892808:1:exon

position:891620:1
position: 891620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892808:1
position: 892808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:925673-925836:1:exon

position:925673:1
position: 925673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925836:1
position: 925836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:929773-929889:1:exon

position:929773:1
position: 929773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929889:1
position: 929889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:934533-934811:1:exon

position:934533:1
position: 934533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934811:1
position: 934811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:937260-937404:1:exon

position:937260:1
position: 937260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937404:1
position: 937404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:942515-942645:1:exon

position:942515:1
position: 942515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942645:1
position: 942645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:945409-945566:1:exon

position:945409:1
position: 945409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945566:1
position: 945566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:946417-950677:1:exon

position:946417:1
position: 946417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR3C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NR3C1
product: nuclear receptor subfamily 3 group C member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 ESTs, 62 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_032124595.1
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(890676..890858,891620..892808,925673..925836,929773..929889,934533..934811,937260..937404,942515..942645,945409..945566,946417..950677)
location: region:890676-950677:1
so has part: feature:890676-890858:1:exon
so has part: feature:891620-892808:1:exon
so has part: feature:925673-925836:1:exon
so has part: feature:929773-929889:1:exon
so has part: feature:934533-934811:1:exon
so has part: feature:937260-937404:1:exon
so has part: feature:942515-942645:1:exon
so has part: feature:945409-945566:1:exon
so has part: feature:946417-950677:1:exon

position:890676:1
position: 890676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890676-890858:1:exon

position:890858:1
position: 890858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891620-892808:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:925673-925836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929773-929889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:934533-934811:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:937260-937404:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:942515-942645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:945409-945566:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946417-950677:1:exon

NR3C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor
translation: MDSKELLNPSDQDETRKNALISTKGGIVMDFHPPFRGGATVQAPVSTSPLPASSQSDSSQQPALADFPKGLGNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFSHQGQIGVSSGETDFRLLEESIASLNKSSSLAEDAKGTASSDVPLEPDFPGMAGRSVPAESGAAVQSQVGSNGGNLKLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISADDAFFLEGSLGEDCKPPLLSDTKPKINDRGDLLPSSKMPMPQVKTEKEDFIELCTPGIKQESMGPLYCQANFSRSNLLGTKVSAISIHGVSTSGGQVYHYDLNTASLSQQQDQKPIFNIIPSLPAGSENWNRCQGSGDEALAPLGTLNLSGRPAFSNGYSSPGMRSDISSSPSTTSTSTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGLQQGGAAGAREAPEAAGSKSIVPASLPQLTPTLVSLLEVIEPEVLYSGYDSSLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYLCMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(891634..892808,925673..925836,929773..929889,934533..934811,937260..937404,942515..942645,945409..945566,946417..946569)
location: region:891634-946569:1
so has part: feature:891634-892808:1:exon
so has part: feature:925673-925836:1:exon
so has part: feature:929773-929889:1:exon
so has part: feature:934533-934811:1:exon
so has part: feature:937260-937404:1:exon
so has part: feature:942515-942645:1:exon
so has part: feature:945409-945566:1:exon
so has part: feature:946417-946569:1:exon

XP_031980485.1
type: Protein
SIO_000068: ncbiprotein

position:891634:1
position: 891634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946569:1
position: 946569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891634-892808:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:925673-925836:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929773-929889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:934533-934811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937260-937404:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942515-942645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:945409-945566:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:946417-946569:1:exon

NR3C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor
translation: MDSKELLNPSDQDETRKNALISTKGGIVMDFHPPFRGGATVQAPVSTSPLPASSQSDSSQQPALADFPKGLGNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFSHQGQIGVSSGETDFRLLEESIASLNKSSSLAEDAKGTASSDVPLEPDFPGMAGRSVPAESGAAVQSQVGSNGGNLKLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISADDAFFLEGSLGEDCKPPLLSDTKPKINDRGDLLPSSKMPMPQVKTEKEDFIELCTPGIKQESMGPLYCQANFSRSNLLGTKVSAISIHGVSTSGGQVYHYDLNTASLSQQQDQKPIFNIIPSLPAGSENWNRCQGSGDEALAPLGTLNLSGRPAFSNGYSSPGMRSDISSSPSTTSTSTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGLQQGGAAGAREAPEAAGSKSIVPASLPQLTPTLVSLLEVIEPEVLYSGYDSSLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYLCMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(891634..892808,925673..925836,929773..929889,934533..934811,937260..937404,942515..942645,945409..945566,946417..946569)
location: region:891634-946569:1
so has part: feature:891634-892808:1:exon
so has part: feature:925673-925836:1:exon
so has part: feature:929773-929889:1:exon
so has part: feature:934533-934811:1:exon
so has part: feature:937260-937404:1:exon
so has part: feature:942515-942645:1:exon
so has part: feature:945409-945566:1:exon
so has part: feature:946417-946569:1:exon

XP_031980486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:891634-892808:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:925673-925836:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:929773-929889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:934533-934811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:937260-937404:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942515-942645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:945409-945566:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:946417-946569:1:exon

LOC116451319
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451319
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(950418..954019)
location: region:950418-954019:-1
so has part: feature:950418-954019:-1:exon
subclass of: SO_0000011

116451319
type: Gene
SIO_000068: ncbigene

position:950418:-1
position: 950418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954019:-1
position: 954019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950418-954019:-1:exon

LOC116451319
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451319
product: uncharacterized LOC116451319
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004243171.1
SIO_010081: LOC116451319
subclass of: SO_0000673
so part of: LOC116451319
location: complement(join(950418..952394,953603..954019))
location: region:950418-954019:-1
so has part: feature:953603-954019:-1:exon
so has part: feature:950418-952394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:953603-954019:-1:exon

position:953603:-1
position: 953603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950418-952394:-1:exon

position:952394:-1
position: 952394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(955700..1058222)
location: region:955700-1058222:-1
so has part: feature:955700-1058222:-1:exon
subclass of: SO_0000010

116451320
type: Gene
SIO_000068: ncbigene

position:955700:-1
position: 955700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058222:-1
position: 1058222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:955700-1058222:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_032124598.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(955700..958308,960038..960129,978872..979025,983286..983424,984821..984980,997044..997149,997960..998018,999082..999169,1003278..1003352,1004068..1004133,1009758..1009794,1024475..1024553,1031459..1031553,1034146..1034246,1034536..1034665,1035233..1035337,1036155..1036265,1037912..1038013,1039078..1039149,1039472..1039533,1040465..1040560,1058069..1058222))
location: region:955700-1058222:-1
so has part: feature:1058069-1058222:-1:exon
so has part: feature:1040465-1040560:-1:exon
so has part: feature:1039472-1039533:-1:exon
so has part: feature:1039078-1039149:-1:exon
so has part: feature:1037912-1038013:-1:exon
so has part: feature:1036155-1036265:-1:exon
so has part: feature:1035233-1035337:-1:exon
so has part: feature:1034536-1034665:-1:exon
so has part: feature:1034146-1034246:-1:exon
so has part: feature:1031459-1031553:-1:exon
so has part: feature:1024475-1024553:-1:exon
so has part: feature:1009758-1009794:-1:exon
so has part: feature:1004068-1004133:-1:exon
so has part: feature:1003278-1003352:-1:exon
so has part: feature:999082-999169:-1:exon
so has part: feature:997960-998018:-1:exon
so has part: feature:997044-997149:-1:exon
so has part: feature:984821-984980:-1:exon
so has part: feature:983286-983424:-1:exon
so has part: feature:978872-979025:-1:exon
so has part: feature:960038-960129:-1:exon
so has part: feature:955700-958308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1058069-1058222:-1:exon

position:1058069:-1
position: 1058069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1040465-1040560:-1:exon

position:1040465:-1
position: 1040465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040560:-1
position: 1040560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1039472-1039533:-1:exon

position:1039472:-1
position: 1039472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039533:-1
position: 1039533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1039078-1039149:-1:exon

position:1039078:-1
position: 1039078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039149:-1
position: 1039149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1037912-1038013:-1:exon

position:1037912:-1
position: 1037912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038013:-1
position: 1038013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1036155-1036265:-1:exon

position:1036155:-1
position: 1036155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036265:-1
position: 1036265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1035233-1035337:-1:exon

position:1035233:-1
position: 1035233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035337:-1
position: 1035337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1034536-1034665:-1:exon

position:1034536:-1
position: 1034536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034665:-1
position: 1034665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1034146-1034246:-1:exon

position:1034146:-1
position: 1034146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034246:-1
position: 1034246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1031459-1031553:-1:exon

position:1031459:-1
position: 1031459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031553:-1
position: 1031553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1024475-1024553:-1:exon

position:1024475:-1
position: 1024475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024553:-1
position: 1024553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1009758-1009794:-1:exon

position:1009758:-1
position: 1009758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009794:-1
position: 1009794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1004068-1004133:-1:exon

position:1004068:-1
position: 1004068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004133:-1
position: 1004133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1003278-1003352:-1:exon

position:1003278:-1
position: 1003278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003352:-1
position: 1003352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:999082-999169:-1:exon

position:999082:-1
position: 999082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999169:-1
position: 999169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:997960-998018:-1:exon

position:997960:-1
position: 997960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998018:-1
position: 998018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:997044-997149:-1:exon

position:997044:-1
position: 997044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997149:-1
position: 997149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:984821-984980:-1:exon

position:984821:-1
position: 984821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984980:-1
position: 984980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:983286-983424:-1:exon

position:983286:-1
position: 983286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983424:-1
position: 983424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:978872-979025:-1:exon

position:978872:-1
position: 978872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979025:-1
position: 979025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:960038-960129:-1:exon

position:960038:-1
position: 960038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960129:-1
position: 960129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:955700-958308:-1:exon

position:958308:-1
position: 958308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XM_032124597.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(955700..958308,960038..960129,962048..962158,978872..979025,983286..983424,984821..984980,997044..997149,997960..998018,999082..999169,1003278..1003352,1004068..1004133,1009758..1009794,1024475..1024553,1031459..1031553,1034146..1034246,1034536..1034665,1035233..1035337,1036155..1036265,1037912..1038013,1039078..1039149,1039472..1039533,1040465..1040560,1058069..1058222))
location: region:955700-1058222:-1
so has part: feature:1058069-1058222:-1:exon
so has part: feature:1040465-1040560:-1:exon
so has part: feature:1039472-1039533:-1:exon
so has part: feature:1039078-1039149:-1:exon
so has part: feature:1037912-1038013:-1:exon
so has part: feature:1036155-1036265:-1:exon
so has part: feature:1035233-1035337:-1:exon
so has part: feature:1034536-1034665:-1:exon
so has part: feature:1034146-1034246:-1:exon
so has part: feature:1031459-1031553:-1:exon
so has part: feature:1024475-1024553:-1:exon
so has part: feature:1009758-1009794:-1:exon
so has part: feature:1004068-1004133:-1:exon
so has part: feature:1003278-1003352:-1:exon
so has part: feature:999082-999169:-1:exon
so has part: feature:997960-998018:-1:exon
so has part: feature:997044-997149:-1:exon
so has part: feature:984821-984980:-1:exon
so has part: feature:983286-983424:-1:exon
so has part: feature:978872-979025:-1:exon
so has part: feature:962048-962158:-1:exon
so has part: feature:960038-960129:-1:exon
so has part: feature:955700-958308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1058069-1058222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040465-1040560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1039472-1039533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039078-1039149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037912-1038013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036155-1036265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035233-1035337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034536-1034665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034146-1034246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1031459-1031553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024475-1024553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1009758-1009794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1004068-1004133:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1003278-1003352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999082-999169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:997960-998018:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:997044-997149:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:984821-984980:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:983286-983424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:978872-979025:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:962048-962158:-1:exon

position:962048:-1
position: 962048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962158:-1
position: 962158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:960038-960129:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:955700-958308:-1:exon

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X2
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATEADTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAPASNSQLLLSRKKSTESKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVISSNVNSFLNSNSAPQPSLNSSDLELEVIKPNRPNSLSPLRKARALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(958220..958308,960038..960129,978872..979025,983286..983424,984821..984980,997044..997149,997960..998018,999082..999169,1003278..1003352,1004068..1004133,1009758..1009794,1024475..1024553,1031459..1031553,1034146..1034246,1034536..1034665,1035233..1035337,1036155..1036265,1037912..1038013,1039078..1039149,1039472..1039533,1040465..1040560,1058069..1058222))
location: region:958220-1058222:-1
so has part: feature:1058069-1058222:-1:exon
so has part: feature:1040465-1040560:-1:exon
so has part: feature:1039472-1039533:-1:exon
so has part: feature:1039078-1039149:-1:exon
so has part: feature:1037912-1038013:-1:exon
so has part: feature:1036155-1036265:-1:exon
so has part: feature:1035233-1035337:-1:exon
so has part: feature:1034536-1034665:-1:exon
so has part: feature:1034146-1034246:-1:exon
so has part: feature:1031459-1031553:-1:exon
so has part: feature:1024475-1024553:-1:exon
so has part: feature:1009758-1009794:-1:exon
so has part: feature:1004068-1004133:-1:exon
so has part: feature:1003278-1003352:-1:exon
so has part: feature:999082-999169:-1:exon
so has part: feature:997960-998018:-1:exon
so has part: feature:997044-997149:-1:exon
so has part: feature:984821-984980:-1:exon
so has part: feature:983286-983424:-1:exon
so has part: feature:978872-979025:-1:exon
so has part: feature:960038-960129:-1:exon
so has part: feature:958220-958308:-1:exon

XP_031980489.1
type: Protein
SIO_000068: ncbiprotein

position:958220:-1
position: 958220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058069-1058222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040465-1040560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1039472-1039533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039078-1039149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037912-1038013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036155-1036265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035233-1035337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034536-1034665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034146-1034246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1031459-1031553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024475-1024553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1009758-1009794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1004068-1004133:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1003278-1003352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999082-999169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:997960-998018:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:997044-997149:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:984821-984980:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:983286-983424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:978872-979025:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:960038-960129:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:958220-958308:-1:exon

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X1
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATEADTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAPASNSQLLLSRKKSTESKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVISSNVNSFLNSNSAPQPSLNSSDLELEVIKPNRPNSLPQNPSPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPISSPLRKARALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFL
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(958220..958308,960038..960129,962048..962158,978872..979025,983286..983424,984821..984980,997044..997149,997960..998018,999082..999169,1003278..1003352,1004068..1004133,1009758..1009794,1024475..1024553,1031459..1031553,1034146..1034246,1034536..1034665,1035233..1035337,1036155..1036265,1037912..1038013,1039078..1039149,1039472..1039533,1040465..1040560,1058069..1058222))
location: region:958220-1058222:-1
so has part: feature:1058069-1058222:-1:exon
so has part: feature:1040465-1040560:-1:exon
so has part: feature:1039472-1039533:-1:exon
so has part: feature:1039078-1039149:-1:exon
so has part: feature:1037912-1038013:-1:exon
so has part: feature:1036155-1036265:-1:exon
so has part: feature:1035233-1035337:-1:exon
so has part: feature:1034536-1034665:-1:exon
so has part: feature:1034146-1034246:-1:exon
so has part: feature:1031459-1031553:-1:exon
so has part: feature:1024475-1024553:-1:exon
so has part: feature:1009758-1009794:-1:exon
so has part: feature:1004068-1004133:-1:exon
so has part: feature:1003278-1003352:-1:exon
so has part: feature:999082-999169:-1:exon
so has part: feature:997960-998018:-1:exon
so has part: feature:997044-997149:-1:exon
so has part: feature:984821-984980:-1:exon
so has part: feature:983286-983424:-1:exon
so has part: feature:978872-979025:-1:exon
so has part: feature:962048-962158:-1:exon
so has part: feature:960038-960129:-1:exon
so has part: feature:958220-958308:-1:exon

XP_031980488.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1058069-1058222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040465-1040560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1039472-1039533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039078-1039149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037912-1038013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036155-1036265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035233-1035337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034536-1034665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034146-1034246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1031459-1031553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024475-1024553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1009758-1009794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1004068-1004133:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1003278-1003352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999082-999169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:997960-998018:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:997044-997149:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:984821-984980:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:983286-983424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:978872-979025:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:962048-962158:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:960038-960129:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:958220-958308:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032124599.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(960136..961754,962048..962158,978872..979025,983286..983424,984821..984980,997044..997149,997960..998018,999082..999169,1003278..1003352,1004068..1004133,1009758..1009794,1024475..1024553,1031459..1031553,1034146..1034246,1034536..1034665,1035233..1035337,1036155..1036265,1037912..1038013,1039078..1039149,1039472..1039533,1040465..1040560,1058069..1058222))
location: region:960136-1058222:-1
so has part: feature:1058069-1058222:-1:exon
so has part: feature:1040465-1040560:-1:exon
so has part: feature:1039472-1039533:-1:exon
so has part: feature:1039078-1039149:-1:exon
so has part: feature:1037912-1038013:-1:exon
so has part: feature:1036155-1036265:-1:exon
so has part: feature:1035233-1035337:-1:exon
so has part: feature:1034536-1034665:-1:exon
so has part: feature:1034146-1034246:-1:exon
so has part: feature:1031459-1031553:-1:exon
so has part: feature:1024475-1024553:-1:exon
so has part: feature:1009758-1009794:-1:exon
so has part: feature:1004068-1004133:-1:exon
so has part: feature:1003278-1003352:-1:exon
so has part: feature:999082-999169:-1:exon
so has part: feature:997960-998018:-1:exon
so has part: feature:997044-997149:-1:exon
so has part: feature:984821-984980:-1:exon
so has part: feature:983286-983424:-1:exon
so has part: feature:978872-979025:-1:exon
so has part: feature:962048-962158:-1:exon
so has part: feature:960136-961754:-1:exon

position:960136:-1
position: 960136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058069-1058222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040465-1040560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1039472-1039533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039078-1039149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037912-1038013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036155-1036265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035233-1035337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034536-1034665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034146-1034246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1031459-1031553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024475-1024553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1009758-1009794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1004068-1004133:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1003278-1003352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999082-999169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:997960-998018:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:997044-997149:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:984821-984980:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:983286-983424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:978872-979025:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:962048-962158:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:960136-961754:-1:exon

position:961754:-1
position: 961754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X3
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATEADTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAPASNSQLLLSRKKSTESKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVISSNVNSFLNSNSAPQPSLNSSDLELEVIKPNRPNSLPQNPSPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPIR
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(961751..961754,962048..962158,978872..979025,983286..983424,984821..984980,997044..997149,997960..998018,999082..999169,1003278..1003352,1004068..1004133,1009758..1009794,1024475..1024553,1031459..1031553,1034146..1034246,1034536..1034665,1035233..1035337,1036155..1036265,1037912..1038013,1039078..1039149,1039472..1039533,1040465..1040560,1058069..1058222))
location: region:961751-1058222:-1
so has part: feature:1058069-1058222:-1:exon
so has part: feature:1040465-1040560:-1:exon
so has part: feature:1039472-1039533:-1:exon
so has part: feature:1039078-1039149:-1:exon
so has part: feature:1037912-1038013:-1:exon
so has part: feature:1036155-1036265:-1:exon
so has part: feature:1035233-1035337:-1:exon
so has part: feature:1034536-1034665:-1:exon
so has part: feature:1034146-1034246:-1:exon
so has part: feature:1031459-1031553:-1:exon
so has part: feature:1024475-1024553:-1:exon
so has part: feature:1009758-1009794:-1:exon
so has part: feature:1004068-1004133:-1:exon
so has part: feature:1003278-1003352:-1:exon
so has part: feature:999082-999169:-1:exon
so has part: feature:997960-998018:-1:exon
so has part: feature:997044-997149:-1:exon
so has part: feature:984821-984980:-1:exon
so has part: feature:983286-983424:-1:exon
so has part: feature:978872-979025:-1:exon
so has part: feature:962048-962158:-1:exon
so has part: feature:961751-961754:-1:exon

XP_031980490.1
type: Protein
SIO_000068: ncbiprotein

position:961751:-1
position: 961751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058069-1058222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040465-1040560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1039472-1039533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039078-1039149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037912-1038013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036155-1036265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035233-1035337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034536-1034665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034146-1034246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1031459-1031553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024475-1024553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1009758-1009794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1004068-1004133:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1003278-1003352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999082-999169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:997960-998018:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:997044-997149:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:984821-984980:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:983286-983424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:978872-979025:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:962048-962158:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:961751-961754:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_032124602.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(963278..964817,978872..979025,983286..983424,984821..984980,997044..997149,997960..998018,999082..999169,1003278..1003352,1004068..1004133,1009758..1009794,1024475..1024553,1031459..1031553,1034146..1034246,1034536..1034665,1035233..1035337,1036155..1036265,1037912..1038013,1039078..1039149,1039472..1039533,1040465..1040560,1058069..1058222))
location: region:963278-1058222:-1
so has part: feature:1058069-1058222:-1:exon
so has part: feature:1040465-1040560:-1:exon
so has part: feature:1039472-1039533:-1:exon
so has part: feature:1039078-1039149:-1:exon
so has part: feature:1037912-1038013:-1:exon
so has part: feature:1036155-1036265:-1:exon
so has part: feature:1035233-1035337:-1:exon
so has part: feature:1034536-1034665:-1:exon
so has part: feature:1034146-1034246:-1:exon
so has part: feature:1031459-1031553:-1:exon
so has part: feature:1024475-1024553:-1:exon
so has part: feature:1009758-1009794:-1:exon
so has part: feature:1004068-1004133:-1:exon
so has part: feature:1003278-1003352:-1:exon
so has part: feature:999082-999169:-1:exon
so has part: feature:997960-998018:-1:exon
so has part: feature:997044-997149:-1:exon
so has part: feature:984821-984980:-1:exon
so has part: feature:983286-983424:-1:exon
so has part: feature:978872-979025:-1:exon
so has part: feature:963278-964817:-1:exon

position:963278:-1
position: 963278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058069-1058222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040465-1040560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1039472-1039533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039078-1039149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037912-1038013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036155-1036265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035233-1035337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034536-1034665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034146-1034246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1031459-1031553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024475-1024553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1009758-1009794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1004068-1004133:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1003278-1003352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999082-999169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:997960-998018:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:997044-997149:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:984821-984980:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:983286-983424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:978872-979025:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:963278-964817:-1:exon

position:964817:-1
position: 964817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X4
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKDAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATEADTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAPASNSQLLLSRKKSTESKPPSCSERPLTLFHTAQPNEKQENRNSIINSSLESVISSNVNSFLNSNSAPQPSLNSSDLELEVIKPNRPNSLKRPSQSPPE
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(964787..964817,978872..979025,983286..983424,984821..984980,997044..997149,997960..998018,999082..999169,1003278..1003352,1004068..1004133,1009758..1009794,1024475..1024553,1031459..1031553,1034146..1034246,1034536..1034665,1035233..1035337,1036155..1036265,1037912..1038013,1039078..1039149,1039472..1039533,1040465..1040560,1058069..1058222))
location: region:964787-1058222:-1
so has part: feature:1058069-1058222:-1:exon
so has part: feature:1040465-1040560:-1:exon
so has part: feature:1039472-1039533:-1:exon
so has part: feature:1039078-1039149:-1:exon
so has part: feature:1037912-1038013:-1:exon
so has part: feature:1036155-1036265:-1:exon
so has part: feature:1035233-1035337:-1:exon
so has part: feature:1034536-1034665:-1:exon
so has part: feature:1034146-1034246:-1:exon
so has part: feature:1031459-1031553:-1:exon
so has part: feature:1024475-1024553:-1:exon
so has part: feature:1009758-1009794:-1:exon
so has part: feature:1004068-1004133:-1:exon
so has part: feature:1003278-1003352:-1:exon
so has part: feature:999082-999169:-1:exon
so has part: feature:997960-998018:-1:exon
so has part: feature:997044-997149:-1:exon
so has part: feature:984821-984980:-1:exon
so has part: feature:983286-983424:-1:exon
so has part: feature:978872-979025:-1:exon
so has part: feature:964787-964817:-1:exon

XP_031980493.1
type: Protein
SIO_000068: ncbiprotein

position:964787:-1
position: 964787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058069-1058222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040465-1040560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1039472-1039533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039078-1039149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037912-1038013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1036155-1036265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1035233-1035337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1034536-1034665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1034146-1034246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1031459-1031553:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1024475-1024553:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1009758-1009794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1004068-1004133:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1003278-1003352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999082-999169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:997960-998018:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:997044-997149:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:984821-984980:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:983286-983424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:978872-979025:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:964787-964817:-1:exon

FGF1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1074038..1096006
location: region:1074038-1096006:1
so has part: feature:1074038-1096006:1:exon
subclass of: SO_0000010

116451466
type: Gene
SIO_000068: ncbigene

position:1074038:1
position: 1074038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096006:1
position: 1096006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074038-1096006:1:exon

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FGF1
product: fibroblast growth factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_032124978.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1074038..1074318,1090322..1090514,1093784..1093887,1094596..1096006)
location: region:1074038-1096006:1
so has part: feature:1074038-1074318:1:exon
so has part: feature:1090322-1090514:1:exon
so has part: feature:1093784-1093887:1:exon
so has part: feature:1094596-1096006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1074038-1074318:1:exon

position:1074318:1
position: 1074318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1090322-1090514:1:exon

position:1090322:1
position: 1090322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090514:1
position: 1090514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1093784-1093887:1:exon

position:1093784:1
position: 1093784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093887:1
position: 1093887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1094596-1096006:1:exon

position:1094596:1
position: 1094596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FGF1
product: fibroblast growth factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_032124976.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1074040..1074318,1090322..1090514,1093784..1093887,1094593..1096003)
location: region:1074040-1096003:1
so has part: feature:1074040-1074318:1:exon
so has part: feature:1090322-1090514:1:exon
so has part: feature:1093784-1093887:1:exon
so has part: feature:1094593-1096003:1:exon

position:1074040:1
position: 1074040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096003:1
position: 1096003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074040-1074318:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1090322-1090514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1093784-1093887:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1094593-1096003:1:exon

position:1094593:1
position: 1094593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FGF1
product: fibroblast growth factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_032124977.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1076914..1077015,1090322..1090514,1093784..1093887,1094593..1096003)
location: region:1076914-1096003:1
so has part: feature:1076914-1077015:1:exon
so has part: feature:1090322-1090514:1:exon
so has part: feature:1093784-1093887:1:exon
so has part: feature:1094593-1096003:1:exon

position:1076914:1
position: 1076914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076914-1077015:1:exon

position:1077015:1
position: 1077015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1090322-1090514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1093784-1093887:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1094593-1096003:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDEHIQLQLSAESVGVVHIKSTQSGQYLAMDTNGLLYGSQLLGEECLFLERLEENHYNTYVSKMHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1090346..1090514,1093784..1093887,1094593..1094787)
location: region:1090346-1094787:1
so has part: feature:1090346-1090514:1:exon
so has part: feature:1093784-1093887:1:exon
so has part: feature:1094593-1094787:1:exon

XP_031980867.1
type: Protein
SIO_000068: ncbiprotein

position:1090346:1
position: 1090346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094787:1
position: 1094787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090346-1090514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1093784-1093887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1094593-1094787:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDEHIQLQLSAESVGVVHIKSTQSGQYLAMDTNGLLYGSQLLGEECLFLERLEENHYNTYVSKMHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1090346..1090514,1093784..1093887,1094593..1094787)
location: region:1090346-1094787:1
so has part: feature:1090346-1090514:1:exon
so has part: feature:1093784-1093887:1:exon
so has part: feature:1094593-1094787:1:exon

XP_031980868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1090346-1090514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1093784-1093887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1094593-1094787:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X2
translation: MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDEHIQLQLSAESVGVVHIKSTQSGQYLAMDTNGLLYGSLLGEECLFLERLEENHYNTYVSKMHADKNWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSAD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(1090346..1090514,1093784..1093887,1094596..1094787)
location: region:1090346-1094787:1
so has part: feature:1090346-1090514:1:exon
so has part: feature:1093784-1093887:1:exon
so has part: feature:1094596-1094787:1:exon

XP_031980869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1090346-1090514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1093784-1093887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1094596-1094787:1:exon

LOC116451467
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1101046..1136217)
location: region:1101046-1136217:-1
so has part: feature:1101046-1136217:-1:exon
subclass of: SO_0000011

116451467
type: Gene
SIO_000068: ncbigene

position:1101046:-1
position: 1101046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136217:-1
position: 1136217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101046-1136217:-1:exon

LOC116451467
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451467
product: uncharacterized LOC116451467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XR_004243204.1
SIO_010081: LOC116451467
subclass of: SO_0000673
so part of: LOC116451467
location: complement(join(1101046..1101427,1105544..1105723,1113599..1113681,1114206..1114335,1136101..1136217))
location: region:1101046-1136217:-1
so has part: feature:1136101-1136217:-1:exon
so has part: feature:1114206-1114335:-1:exon
so has part: feature:1113599-1113681:-1:exon
so has part: feature:1105544-1105723:-1:exon
so has part: feature:1101046-1101427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1136101-1136217:-1:exon

position:1136101:-1
position: 1136101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1114206-1114335:-1:exon

position:1114206:-1
position: 1114206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114335:-1
position: 1114335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1113599-1113681:-1:exon

position:1113599:-1
position: 1113599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113681:-1
position: 1113681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1105544-1105723:-1:exon

position:1105544:-1
position: 1105544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105723:-1
position: 1105723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1101046-1101427:-1:exon

position:1101427:-1
position: 1101427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPRY4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SPRY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1136331..1148975
location: region:1136331-1148975:1
so has part: feature:1136331-1148975:1:exon
subclass of: SO_0000010

116451603
type: Gene
SIO_000068: ncbigene

position:1136331:1
position: 1136331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148975:1
position: 1148975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1136331-1148975:1:exon

SPRY4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SPRY4
product: sprouty RTK signaling antagonist 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_032125231.1
SIO_010081: SPRY4
subclass of: SO_0000673
so part of: SPRY4
location: join(1136331..1136520,1146311..1148975)
location: region:1136331-1148975:1
so has part: feature:1136331-1136520:1:exon
so has part: feature:1146311-1148975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1136331-1136520:1:exon

position:1136520:1
position: 1136520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1146311-1148975:1:exon

position:1146311:1
position: 1146311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPRY4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SPRY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein sprouty homolog 4
translation: MEPRIPHNITVVPNSVMVQPLLDSRIPYGRLQHPLTILPIDQMKTTHIENDYTDNPSASQPPAQKRPRAPHELGLSSQQHPQRCEQDVTHPWISFSGRPSSISSSSSTSSDQRLLDHMAPVPVAEQSSPRAVRIQPKVINCKPLDLKGTVSQELDKHFLLCEACGKCKCKECALPRTLPSCWVCNQECLCSAQNLVNYSTCMCLVKGVFYHCTNEDDEGTCADHPCSCSHSNCCARWSFMSALSLVLPCLLCYLPATGCVKLSQRCYDQVSRPGCRCKNTNSVICKALPESKGAEKPF
SIO_010081: SPRY4
subclass of: SO_0000673
so part of: SPRY4
location: 1146357..1147253
location: region:1146357-1147253:1
so has part: feature:1146357-1147253:1:exon

XP_031981122.1
type: Protein
SIO_000068: ncbiprotein

position:1146357:1
position: 1146357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147253:1
position: 1147253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1146357-1147253:1:exon

NDFIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: NDFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1170299..1186207)
location: region:1170299-1186207:-1
so has part: feature:1170299-1186207:-1:exon
subclass of: SO_0000010

116451539
type: Gene
SIO_000068: ncbigene

position:1170299:-1
position: 1170299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186207:-1
position: 1186207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170299-1186207:-1:exon

NDFIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NDFIP1
product: Nedd4 family interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 18 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 140 samples with support for all annotated introns
transcript id: XM_032125127.1
SIO_010081: NDFIP1
subclass of: SO_0000673
so part of: NDFIP1
location: complement(join(1170299..1170446,1172363..1172468,1173029..1173095,1174736..1174860,1175029..1175116,1175966..1176096,1176845..1176932,1185929..1186207))
location: region:1170299-1186207:-1
so has part: feature:1185929-1186207:-1:exon
so has part: feature:1176845-1176932:-1:exon
so has part: feature:1175966-1176096:-1:exon
so has part: feature:1175029-1175116:-1:exon
so has part: feature:1174736-1174860:-1:exon
so has part: feature:1173029-1173095:-1:exon
so has part: feature:1172363-1172468:-1:exon
so has part: feature:1170299-1170446:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1185929-1186207:-1:exon

position:1185929:-1
position: 1185929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176845-1176932:-1:exon

position:1176845:-1
position: 1176845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176932:-1
position: 1176932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175966-1176096:-1:exon

position:1175966:-1
position: 1175966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176096:-1
position: 1176096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175029-1175116:-1:exon

position:1175029:-1
position: 1175029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175116:-1
position: 1175116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1174736-1174860:-1:exon

position:1174736:-1
position: 1174736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174860:-1
position: 1174860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1173029-1173095:-1:exon

position:1173029:-1
position: 1173029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173095:-1
position: 1173095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1172363-1172468:-1:exon

position:1172363:-1
position: 1172363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172468:-1
position: 1172468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1170299-1170446:-1:exon

position:1170446:-1
position: 1170446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDFIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NDFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4 family-interacting protein 1
translation: MVLEVSPSLGGSVIPCPLQERCPRPGAAPAAGGAEGGAAERDGEGGSVRSPQRAATGPPPPPPAQRPHRPRSAMAAAAAEPSTGRYQQLQNEEEPGEAVPVVNDAPPPYSSISAESTAYFDYKDESGFPKPPSYNVATTLPSYDEAERTKAEATIPLVPGRDDDFVTRDDFDDTDQLRIGNDGIFMLTFFMAFLFNWIGFFLSFCLTTSAAGRYGAISGFGLSLIKWILIVRFSTYFPGYFDGQYWLWWVFLVLGFLLFLRGFINYAKVRKMPDTFSTLPRTRVLFIY
SIO_010081: NDFIP1
subclass of: SO_0000673
so part of: NDFIP1
location: complement(join(1172365..1172468,1173029..1173095,1174736..1174860,1175029..1175116,1175966..1176096,1176845..1176932,1185929..1186192))
location: region:1172365-1186192:-1
so has part: feature:1185929-1186192:-1:exon
so has part: feature:1176845-1176932:-1:exon
so has part: feature:1175966-1176096:-1:exon
so has part: feature:1175029-1175116:-1:exon
so has part: feature:1174736-1174860:-1:exon
so has part: feature:1173029-1173095:-1:exon
so has part: feature:1172365-1172468:-1:exon

XP_031981018.1
type: Protein
SIO_000068: ncbiprotein

position:1172365:-1
position: 1172365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1186192:-1
position: 1186192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1185929-1186192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176845-1176932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175966-1176096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175029-1175116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1174736-1174860:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1173029-1173095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1172365-1172468:-1:exon

GNPDA1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: GNPDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1192477..1197279
location: region:1192477-1197279:1
so has part: feature:1192477-1197279:1:exon
subclass of: SO_0000010

116451737
type: Gene
SIO_000068: ncbigene

position:1192477:1
position: 1192477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197279:1
position: 1197279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1192477-1197279:1:exon

GNPDA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: GNPDA1
product: glucosamine-6-phosphate deaminase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032125414.1
SIO_010081: GNPDA1
subclass of: SO_0000673
so part of: GNPDA1
location: join(1192477..1192780,1192857..1192958,1194076..1194258,1194839..1195023,1195606..1195780,1196052..1197279)
location: region:1192477-1197279:1
so has part: feature:1192477-1192780:1:exon
so has part: feature:1192857-1192958:1:exon
so has part: feature:1194076-1194258:1:exon
so has part: feature:1194839-1195023:1:exon
so has part: feature:1195606-1195780:1:exon
so has part: feature:1196052-1197279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1192477-1192780:1:exon

position:1192780:1
position: 1192780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1192857-1192958:1:exon

position:1192857:1
position: 1192857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192958:1
position: 1192958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1194076-1194258:1:exon

position:1194076:1
position: 1194076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194258:1
position: 1194258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1194839-1195023:1:exon

position:1194839:1
position: 1194839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195023:1
position: 1195023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1195606-1195780:1:exon

position:1195606:1
position: 1195606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195780:1
position: 1195780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1196052-1197279:1:exon

position:1196052:1
position: 1196052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNPDA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: GNPDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine-6-phosphate isomerase 1
translation: MKLIILENYSQASEWAAKYIRNRIVQFGPGPGRFFTLGLPTGSTPLGCYSKLVEYYRNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDISPENVHILDGNAPDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLSKVPTMALTVGVGTVMDAKEVMILITGAHKAFALYKAIEDGVNHMWTVSAFQQHPNTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVEPLYSMKEMGAERSQSKKPYSD
SIO_010081: GNPDA1
subclass of: SO_0000673
so part of: GNPDA1
location: join(1192657..1192780,1192857..1192958,1194076..1194258,1194839..1195023,1195606..1195780,1196052..1196149)
location: region:1192657-1196149:1
so has part: feature:1192657-1192780:1:exon
so has part: feature:1192857-1192958:1:exon
so has part: feature:1194076-1194258:1:exon
so has part: feature:1194839-1195023:1:exon
so has part: feature:1195606-1195780:1:exon
so has part: feature:1196052-1196149:1:exon

XP_031981305.1
type: Protein
SIO_000068: ncbiprotein

position:1192657:1
position: 1192657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196149:1
position: 1196149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1192657-1192780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1192857-1192958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1194076-1194258:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1194839-1195023:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1195606-1195780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196052-1196149:1:exon

RNF14
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1197587..1204699)
location: region:1197587-1204699:-1
so has part: feature:1197587-1204699:-1:exon
subclass of: SO_0000010

116451736
type: Gene
SIO_000068: ncbigene

position:1197587:-1
position: 1197587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204699:-1
position: 1204699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197587-1204699:-1:exon

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RNF14
product: ring finger protein 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032125412.1
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1197587..1198286,1198995..1199077,1199680..1199810,1200319..1200491,1201090..1201318,1202022..1202549,1202839..1202990,1203481..1203662,1204167..1204564))
location: region:1197587-1204564:-1
so has part: feature:1204167-1204564:-1:exon
so has part: feature:1203481-1203662:-1:exon
so has part: feature:1202839-1202990:-1:exon
so has part: feature:1202022-1202549:-1:exon
so has part: feature:1201090-1201318:-1:exon
so has part: feature:1200319-1200491:-1:exon
so has part: feature:1199680-1199810:-1:exon
so has part: feature:1198995-1199077:-1:exon
so has part: feature:1197587-1198286:-1:exon

position:1204564:-1
position: 1204564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204167-1204564:-1:exon

position:1204167:-1
position: 1204167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1203481-1203662:-1:exon

position:1203481:-1
position: 1203481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203662:-1
position: 1203662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1202839-1202990:-1:exon

position:1202839:-1
position: 1202839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202990:-1
position: 1202990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1202022-1202549:-1:exon

position:1202022:-1
position: 1202022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202549:-1
position: 1202549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1201090-1201318:-1:exon

position:1201090:-1
position: 1201090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201318:-1
position: 1201318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1200319-1200491:-1:exon

position:1200319:-1
position: 1200319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200491:-1
position: 1200491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1199680-1199810:-1:exon

position:1199680:-1
position: 1199680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199810:-1
position: 1199810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1198995-1199077:-1:exon

position:1198995:-1
position: 1198995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199077:-1
position: 1199077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1197587-1198286:-1:exon

position:1198286:-1
position: 1198286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RNF14
product: ring finger protein 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_032125411.1
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1197799..1199077,1199680..1199810,1200319..1200491,1201090..1201318,1202022..1202549,1202839..1202990,1203481..1203662,1204167..1204311,1204617..1204699))
location: region:1197799-1204699:-1
so has part: feature:1204617-1204699:-1:exon
so has part: feature:1204167-1204311:-1:exon
so has part: feature:1203481-1203662:-1:exon
so has part: feature:1202839-1202990:-1:exon
so has part: feature:1202022-1202549:-1:exon
so has part: feature:1201090-1201318:-1:exon
so has part: feature:1200319-1200491:-1:exon
so has part: feature:1199680-1199810:-1:exon
so has part: feature:1197799-1199077:-1:exon

position:1197799:-1
position: 1197799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204617-1204699:-1:exon

position:1204617:-1
position: 1204617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1204167-1204311:-1:exon

position:1204311:-1
position: 1204311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1203481-1203662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202839-1202990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1202022-1202549:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1201090-1201318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1200319-1200491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1199680-1199810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197799-1199077:-1:exon

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RNF14
product: ring finger protein 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032125410.1
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1197799..1199077,1199680..1199810,1200319..1200491,1201090..1201318,1202022..1202549,1202839..1202990,1203481..1203662,1204167..1204564))
location: region:1197799-1204564:-1
so has part: feature:1204167-1204564:-1:exon
so has part: feature:1203481-1203662:-1:exon
so has part: feature:1202839-1202990:-1:exon
so has part: feature:1202022-1202549:-1:exon
so has part: feature:1201090-1201318:-1:exon
so has part: feature:1200319-1200491:-1:exon
so has part: feature:1199680-1199810:-1:exon
so has part: feature:1197799-1199077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1204167-1204564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1203481-1203662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1202839-1202990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202022-1202549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1201090-1201318:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1200319-1200491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1199680-1199810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197799-1199077:-1:exon

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RNF14
product: ring finger protein 14, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 136 samples with support for all annotated introns
transcript id: XM_032125413.1
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1197799..1199077,1199680..1199810,1200319..1200491,1201090..1201318,1202022..1202549,1202839..1202986,1203481..1203563))
location: region:1197799-1203563:-1
so has part: feature:1203481-1203563:-1:exon
so has part: feature:1202839-1202986:-1:exon
so has part: feature:1202022-1202549:-1:exon
so has part: feature:1201090-1201318:-1:exon
so has part: feature:1200319-1200491:-1:exon
so has part: feature:1199680-1199810:-1:exon
so has part: feature:1197799-1199077:-1:exon

position:1203563:-1
position: 1203563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203481-1203563:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1202839-1202986:-1:exon

position:1202986:-1
position: 1202986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1202022-1202549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1201090-1201318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1200319-1200491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1199680-1199810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1197799-1199077:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSSEDKEAQEDELLALASIYDEDEFKRAESAQGGETRICLELPQDFKIFVRGSSTESLQSSRFEYSVCFLPPLVLNFELPPDYPSTSPPVFTLSGKWLSQAQLSALCKHLDNVWEENRGCVVLFAWMQFLKEETLNYLNISSPYELKMCPQGKGQSRTPVGPLEAGKDCGGATGSATAEEEIMDARAVQDVESLSSLIREILDFDQAQRRKCFNSKMYSCSICFCEKLGSECMHFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEELFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSCCNYAFCTLCKMTYHGVSPCKVTAEKLMDLRNEYLEADETTKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTHIEKLDGCNKMTCTGCMQYFCWLCMGSLSRANPYRHFNDPSSPCFNRLFQAMHIDDGEFWEVEDDDQ
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1199014..1199077,1199680..1199810,1200319..1200491,1201090..1201318,1202022..1202549,1202839..1202990,1203481..1203634))
location: region:1199014-1203634:-1
so has part: feature:1203481-1203634:-1:exon
so has part: feature:1202839-1202990:-1:exon
so has part: feature:1202022-1202549:-1:exon
so has part: feature:1201090-1201318:-1:exon
so has part: feature:1200319-1200491:-1:exon
so has part: feature:1199680-1199810:-1:exon
so has part: feature:1199014-1199077:-1:exon

XP_031981301.1
type: Protein
SIO_000068: ncbiprotein

position:1199014:-1
position: 1199014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203634:-1
position: 1203634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203481-1203634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1202839-1202990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1202022-1202549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1201090-1201318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1200319-1200491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1199680-1199810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1199014-1199077:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSSEDKEAQEDELLALASIYDEDEFKRAESAQGGETRICLELPQDFKIFVRGSSTESLQSSRFEYSVCFLPPLVLNFELPPDYPSTSPPVFTLSGKWLSQAQLSALCKHLDNVWEENRGCVVLFAWMQFLKEETLNYLNISSPYELKMCPQGKGQSRTPVGPLEAGKDCGGATGSATAEEEIMDARAVQDVESLSSLIREILDFDQAQRRKCFNSKMYSCSICFCEKLGSECMHFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEELFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSCCNYAFCTLCKMTYHGVSPCKVTAEKLMDLRNEYLEADETTKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTHIEKLDGCNKMTCTGCMQYFCWLCMGSLSRANPYRHFNDPSSPCFNRLFQAMHIDDGEFWEVEDDDQ
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1199014..1199077,1199680..1199810,1200319..1200491,1201090..1201318,1202022..1202549,1202839..1202990,1203481..1203634))
location: region:1199014-1203634:-1
so has part: feature:1203481-1203634:-1:exon
so has part: feature:1202839-1202990:-1:exon
so has part: feature:1202022-1202549:-1:exon
so has part: feature:1201090-1201318:-1:exon
so has part: feature:1200319-1200491:-1:exon
so has part: feature:1199680-1199810:-1:exon
so has part: feature:1199014-1199077:-1:exon

XP_031981302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1203481-1203634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1202839-1202990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1202022-1202549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1201090-1201318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1200319-1200491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1199680-1199810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1199014-1199077:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSSEDKEAQEDELLALASIYDEDEFKRAESAQGGETRICLELPQDFKIFVRGSSTESLQSSRFEYSVCFLPPLVLNFELPPDYPSTSPPVFTLSGKWLSQAQLSALCKHLDNVWEENRGCVVLFAWMQFLKEETLNYLNISSPYELKMCPQGKGQSRTPVGPLEAGKDCGGATGSATAEEEIMDARAVQDVESLSSLIREILDFDQAQRRKCFNSKMYSCSICFCEKLGSECMHFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEELFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSCCNYAFCTLCKMTYHGVSPCKVTAEKLMDLRNEYLEADETTKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTHIEKLDGCNKMTCTGCMQYFCWLCMGSLSRANPYRHFNDPSSPCFNRLFQAMHIDDGEFWEVEDDDQ
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1199014..1199077,1199680..1199810,1200319..1200491,1201090..1201318,1202022..1202549,1202839..1202990,1203481..1203634))
location: region:1199014-1203634:-1
so has part: feature:1203481-1203634:-1:exon
so has part: feature:1202839-1202990:-1:exon
so has part: feature:1202022-1202549:-1:exon
so has part: feature:1201090-1201318:-1:exon
so has part: feature:1200319-1200491:-1:exon
so has part: feature:1199680-1199810:-1:exon
so has part: feature:1199014-1199077:-1:exon

XP_031981303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1203481-1203634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1202839-1202990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1202022-1202549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1201090-1201318:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1200319-1200491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1199680-1199810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1199014-1199077:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X2
translation: MQFLKEETLNYLNISSPYELKMCPQGKGQSRTPVGPLEAGKDCGGATGSATAEEEIMDARAVQDVESLSSLIREILDFDQAQRRKCFNSKMYSCSICFCEKLGSECMHFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEELFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSCCNYAFCTLCKMTYHGVSPCKVTAEKLMDLRNEYLEADETTKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTHIEKLDGCNKMTCTGCMQYFCWLCMGSLSRANPYRHFNDPSSPCFNRLFQAMHIDDGEFWEVEDDDQ
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(1199014..1199077,1199680..1199810,1200319..1200491,1201090..1201318,1202022..1202477))
location: region:1199014-1202477:-1
so has part: feature:1202022-1202477:-1:exon
so has part: feature:1201090-1201318:-1:exon
so has part: feature:1200319-1200491:-1:exon
so has part: feature:1199680-1199810:-1:exon
so has part: feature:1199014-1199077:-1:exon

XP_031981304.1
type: Protein
SIO_000068: ncbiprotein

position:1202477:-1
position: 1202477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202022-1202477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1201090-1201318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1200319-1200491:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1199680-1199810:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1199014-1199077:-1:exon

HSPA4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: HSPA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1205133..1221244)
location: region:1205133-1221244:-1
so has part: feature:1205133-1221244:-1:exon
subclass of: SO_0000010

116451735
type: Gene
SIO_000068: ncbigene

position:1205133:-1
position: 1205133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221244:-1
position: 1221244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205133-1221244:-1:exon

HSPA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: HSPA4
product: heat shock protein family A (Hsp70) member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 138 samples with support for all annotated introns
transcript id: XM_032125409.1
SIO_010081: HSPA4
subclass of: SO_0000673
so part of: HSPA4
location: complement(join(1205133..1206313,1206518..1206679,1207050..1207169,1207467..1207574,1208276..1208401,1208870..1209022,1209526..1209612,1209975..1210156,1210590..1210723,1211073..1211179,1211302..1211453,1211735..1211811,1212175..1212419,1213739..1213872,1214244..1214343,1214796..1214918,1215122..1215262,1216904..1216961,1221087..1221244))
location: region:1205133-1221244:-1
so has part: feature:1221087-1221244:-1:exon
so has part: feature:1216904-1216961:-1:exon
so has part: feature:1215122-1215262:-1:exon
so has part: feature:1214796-1214918:-1:exon
so has part: feature:1214244-1214343:-1:exon
so has part: feature:1213739-1213872:-1:exon
so has part: feature:1212175-1212419:-1:exon
so has part: feature:1211735-1211811:-1:exon
so has part: feature:1211302-1211453:-1:exon
so has part: feature:1211073-1211179:-1:exon
so has part: feature:1210590-1210723:-1:exon
so has part: feature:1209975-1210156:-1:exon
so has part: feature:1209526-1209612:-1:exon
so has part: feature:1208870-1209022:-1:exon
so has part: feature:1208276-1208401:-1:exon
so has part: feature:1207467-1207574:-1:exon
so has part: feature:1207050-1207169:-1:exon
so has part: feature:1206518-1206679:-1:exon
so has part: feature:1205133-1206313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221087-1221244:-1:exon

position:1221087:-1
position: 1221087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1216904-1216961:-1:exon

position:1216904:-1
position: 1216904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216961:-1
position: 1216961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1215122-1215262:-1:exon

position:1215122:-1
position: 1215122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215262:-1
position: 1215262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1214796-1214918:-1:exon

position:1214796:-1
position: 1214796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214918:-1
position: 1214918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1214244-1214343:-1:exon

position:1214244:-1
position: 1214244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214343:-1
position: 1214343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1213739-1213872:-1:exon

position:1213739:-1
position: 1213739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213872:-1
position: 1213872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1212175-1212419:-1:exon

position:1212175:-1
position: 1212175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212419:-1
position: 1212419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1211735-1211811:-1:exon

position:1211735:-1
position: 1211735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211811:-1
position: 1211811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1211302-1211453:-1:exon

position:1211302:-1
position: 1211302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211453:-1
position: 1211453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1211073-1211179:-1:exon

position:1211073:-1
position: 1211073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211179:-1
position: 1211179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1210590-1210723:-1:exon

position:1210590:-1
position: 1210590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210723:-1
position: 1210723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1209975-1210156:-1:exon

position:1209975:-1
position: 1209975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210156:-1
position: 1210156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1209526-1209612:-1:exon

position:1209526:-1
position: 1209526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209612:-1
position: 1209612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1208870-1209022:-1:exon

position:1208870:-1
position: 1208870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209022:-1
position: 1209022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1208276-1208401:-1:exon

position:1208276:-1
position: 1208276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208401:-1
position: 1208401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1207467-1207574:-1:exon

position:1207467:-1
position: 1207467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207574:-1
position: 1207574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1207050-1207169:-1:exon

position:1207050:-1
position: 1207050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207169:-1
position: 1207169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1206518-1206679:-1:exon

position:1206518:-1
position: 1206518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206679:-1
position: 1206679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1205133-1206313:-1:exon

position:1206313:-1
position: 1206313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: HSPA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 4
translation: MSVVGIDLGFQSCYVAVARAGGIETVANEYSDRSTPACISFGPKNRSIGAAAKSQVISNAKNTVQSFKRFHGRAFSDPFVQAEKASLAYELVQLPTGSTGIKAMYMEEERNFTIEQVTGMLLTKLKETAENALKKPVVDCVVSVPCFYTDAERRSVMDATQIAGLNCLRLINETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNKGKLKVLATAFDTTLGGRKFDEVLVEYFCEEFGKKYKLDIKSKIRALLRLYQECERLKKLMSANASDLPMNIECFMNDIDVSGTMNRSKFLEMCEGLLARVEPPLRSVLEQARLKKEDIYAVEIVGGTTRIPAVKEKISKFFGKEVSTTLNADEAVARGCALQCAILSPAFKVREFSITDLIPYPISLRWNSPAEEGLSDCEVFPKNHAAPFSKVLTFYRKEPFTLEAYYSSPKELPYPDPAIAHFLVQKVTPQTDGSSSKVKVKVRVNIHGIFSVSSASLVEVHKSDENEEPMETDQHAKEEEKMQVDEEQQKAEEQQQTQPENKAESEEMETCQADSKDKKVDQPPQAKKAKVKTTTVDLPIENQLVWQIGKDMLNLFIENEGKMIMQDKLEKERNDAKNAVEEYVYEMRDKLCGVYEKFVSEDDRNSFTLKLEDTEIWLYEDGEDQPKQIYIDKLTELKTLGQPIQARFQESEERPKAFEDLGKQIQQYMKAVHAFKAKDELYEHLDEADVAKVEKSANEAMEWMNNNLNLQNKRSLTLDPVIKAKDIQAKAKELASICNPIVNKPKPKVELPKEEQKPTEPNGPLDGQGDAGSGTQPPEQGSAPTATDKKLPEMDID
SIO_010081: HSPA4
subclass of: SO_0000673
so part of: HSPA4
location: complement(join(1206116..1206313,1206518..1206679,1207050..1207169,1207467..1207574,1208276..1208401,1208870..1209022,1209526..1209612,1209975..1210156,1210590..1210723,1211073..1211179,1211302..1211453,1211735..1211811,1212175..1212419,1213739..1213872,1214244..1214343,1214796..1214918,1215122..1215262,1216904..1216961,1221087..1221193))
location: region:1206116-1221193:-1
so has part: feature:1221087-1221193:-1:exon
so has part: feature:1216904-1216961:-1:exon
so has part: feature:1215122-1215262:-1:exon
so has part: feature:1214796-1214918:-1:exon
so has part: feature:1214244-1214343:-1:exon
so has part: feature:1213739-1213872:-1:exon
so has part: feature:1212175-1212419:-1:exon
so has part: feature:1211735-1211811:-1:exon
so has part: feature:1211302-1211453:-1:exon
so has part: feature:1211073-1211179:-1:exon
so has part: feature:1210590-1210723:-1:exon
so has part: feature:1209975-1210156:-1:exon
so has part: feature:1209526-1209612:-1:exon
so has part: feature:1208870-1209022:-1:exon
so has part: feature:1208276-1208401:-1:exon
so has part: feature:1207467-1207574:-1:exon
so has part: feature:1207050-1207169:-1:exon
so has part: feature:1206518-1206679:-1:exon
so has part: feature:1206116-1206313:-1:exon

XP_031981300.1
type: Protein
SIO_000068: ncbiprotein

position:1206116:-1
position: 1206116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221193:-1
position: 1221193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221087-1221193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216904-1216961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1215122-1215262:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1214796-1214918:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1214244-1214343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1213739-1213872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1212175-1212419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1211735-1211811:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1211302-1211453:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1211073-1211179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1210590-1210723:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1209975-1210156:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1209526-1209612:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1208870-1209022:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1208276-1208401:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1207467-1207574:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1207050-1207169:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1206518-1206679:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1206116-1206313:-1:exon

LOC116451738
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1221301..1221959
location: region:1221301-1221959:1
so has part: feature:1221301-1221959:1:exon
subclass of: SO_0000011

116451738
type: Gene
SIO_000068: ncbigene

position:1221301:1
position: 1221301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221959:1
position: 1221959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221301-1221959:1:exon

LOC116451738
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451738
product: uncharacterized LOC116451738
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XR_004243318.1
SIO_010081: LOC116451738
subclass of: SO_0000673
so part of: LOC116451738
location: join(1221301..1221574,1221672..1221959)
location: region:1221301-1221959:1
so has part: feature:1221301-1221574:1:exon
so has part: feature:1221672-1221959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221301-1221574:1:exon

position:1221574:1
position: 1221574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1221672-1221959:1:exon

position:1221672:1
position: 1221672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZCCHC10
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ZCCHC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1224082..1234793
location: region:1224082-1234793:1
so has part: feature:1224082-1234793:1:exon
subclass of: SO_0000010

116451558
type: Gene
SIO_000068: ncbigene

position:1224082:1
position: 1224082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234793:1
position: 1234793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224082-1234793:1:exon

ZCCHC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZCCHC10
product: zinc finger CCHC-type containing 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032125157.1
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(1224082..1224268,1226758..1226919,1229628..1229667,1233018..1234793)
location: region:1224082-1234793:1
so has part: feature:1224082-1224268:1:exon
so has part: feature:1226758-1226919:1:exon
so has part: feature:1229628-1229667:1:exon
so has part: feature:1233018-1234793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1224082-1224268:1:exon

position:1224268:1
position: 1224268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1226758-1226919:1:exon

position:1226758:1
position: 1226758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226919:1
position: 1226919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1229628-1229667:1:exon

position:1229628:1
position: 1229628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229667:1
position: 1229667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1233018-1234793:1:exon

position:1233018:1
position: 1233018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZCCHC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZCCHC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 10
translation: MATPMHRLIARRQAEANKQHVRCQKCLEFGHWTYECKGKRKYLHRPSRTAQLAKILKEKEKQLQLQQSAGESAAEKKTKKKRSKSVTSSSSSDSSASDSSSDSQDSSTSSEDSDSEDSSSSSSSSSSSSSSSSDFDSDPSSSSSSSSSSSSEEG
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(1224228..1224268,1226758..1226919,1229628..1229667,1233018..1233239)
location: region:1224228-1233239:1
so has part: feature:1224228-1224268:1:exon
so has part: feature:1226758-1226919:1:exon
so has part: feature:1229628-1229667:1:exon
so has part: feature:1233018-1233239:1:exon

XP_031981048.1
type: Protein
SIO_000068: ncbiprotein

position:1224228:1
position: 1224228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233239:1
position: 1233239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224228-1224268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1226758-1226919:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1229628-1229667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233018-1233239:1:exon

AFF4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: AFF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1237051..1284567
location: region:1237051-1284567:1
so has part: feature:1237051-1284567:1:exon
subclass of: SO_0000010

116451303
type: Gene
SIO_000068: ncbigene

position:1237051:1
position: 1237051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284567:1
position: 1284567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1237051-1284567:1:exon

AFF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: AFF4
product: AF4/FMR2 family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XM_032124546.1
SIO_010081: AFF4
subclass of: SO_0000673
so part of: AFF4
location: join(1237051..1237186,1254023..1254149,1255546..1256322,1257626..1257670,1258540..1258626,1263665..1263701,1265194..1265242,1266438..1266458,1267020..1267074,1268047..1268084,1268482..1268644,1269123..1270040,1272178..1272266,1273748..1273985,1275009..1275106,1275635..1275698,1275843..1275979,1276382..1276453,1277119..1277212,1277918..1277961,1278738..1278958,1279499..1284567)
location: region:1237051-1284567:1
so has part: feature:1237051-1237186:1:exon
so has part: feature:1254023-1254149:1:exon
so has part: feature:1255546-1256322:1:exon
so has part: feature:1257626-1257670:1:exon
so has part: feature:1258540-1258626:1:exon
so has part: feature:1263665-1263701:1:exon
so has part: feature:1265194-1265242:1:exon
so has part: feature:1266438-1266458:1:exon
so has part: feature:1267020-1267074:1:exon
so has part: feature:1268047-1268084:1:exon
so has part: feature:1268482-1268644:1:exon
so has part: feature:1269123-1270040:1:exon
so has part: feature:1272178-1272266:1:exon
so has part: feature:1273748-1273985:1:exon
so has part: feature:1275009-1275106:1:exon
so has part: feature:1275635-1275698:1:exon
so has part: feature:1275843-1275979:1:exon
so has part: feature:1276382-1276453:1:exon
so has part: feature:1277119-1277212:1:exon
so has part: feature:1277918-1277961:1:exon
so has part: feature:1278738-1278958:1:exon
so has part: feature:1279499-1284567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1237051-1237186:1:exon

position:1237186:1
position: 1237186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1254023-1254149:1:exon

position:1254023:1
position: 1254023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254149:1
position: 1254149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1255546-1256322:1:exon

position:1255546:1
position: 1255546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256322:1
position: 1256322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1257626-1257670:1:exon

position:1257626:1
position: 1257626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257670:1
position: 1257670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1258540-1258626:1:exon

position:1258540:1
position: 1258540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258626:1
position: 1258626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1263665-1263701:1:exon

position:1263665:1
position: 1263665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263701:1
position: 1263701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1265194-1265242:1:exon

position:1265194:1
position: 1265194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265242:1
position: 1265242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1266438-1266458:1:exon

position:1266438:1
position: 1266438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266458:1
position: 1266458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1267020-1267074:1:exon

position:1267020:1
position: 1267020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267074:1
position: 1267074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1268047-1268084:1:exon

position:1268047:1
position: 1268047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268084:1
position: 1268084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1268482-1268644:1:exon

position:1268482:1
position: 1268482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268644:1
position: 1268644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1269123-1270040:1:exon

position:1269123:1
position: 1269123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270040:1
position: 1270040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1272178-1272266:1:exon

position:1272178:1
position: 1272178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272266:1
position: 1272266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1273748-1273985:1:exon

position:1273748:1
position: 1273748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273985:1
position: 1273985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1275009-1275106:1:exon

position:1275009:1
position: 1275009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275106:1
position: 1275106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1275635-1275698:1:exon

position:1275635:1
position: 1275635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275698:1
position: 1275698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1275843-1275979:1:exon

position:1275843:1
position: 1275843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275979:1
position: 1275979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1276382-1276453:1:exon

position:1276382:1
position: 1276382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276453:1
position: 1276453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1277119-1277212:1:exon

position:1277119:1
position: 1277119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277212:1
position: 1277212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1277918-1277961:1:exon

position:1277918:1
position: 1277918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277961:1
position: 1277961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1278738-1278958:1:exon

position:1278738:1
position: 1278738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278958:1
position: 1278958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1279499-1284567:1:exon

position:1279499:1
position: 1279499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AFF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: AFF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AF4/FMR2 family member 4
translation: MNREDRNVLRMKERERRNQEIQQGDEAFPPNSPLFAEPYKVTSKEDKLSSRIQSMLGNYDEMTDLIGDRPLQKIVAIPKPSVPAAPDDKPAPGFFGEQRHGAGSHQSSKWTPVGPAPSTSAQSQKRSAGLGGHGQRSGGGAGGAGARHERDSYGGGRKKGQHSSEHSKGRSASPGKPPAVSSLGSGHSRAHGSDHHGKDHQRSKSPRDPDPSWDSPSRVPSFASGQHSNQSFPPSLMSKSSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQTHSSGVNELKPSSKAHLTKLKIPSQPLDASASGEVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGTGEQKRYNPSSKTSNGHQSKSCESNQTDMLKDDLKLSSSEDSDGEQDCDKTVPRSTPGSNSEPSQHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYTDQGGSKDSISSTPGRDSKPTQKGSESSRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEEPRGGLKIESETPVDMATNIPSNRHKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDSDENESLPPSSQTPKYSESNRTPVKSSMEEDDSFFRQRMFSPMEEKELLSPLSDPDERYPLIVKIDLSLLSRIPGKPYKDADAAKTEKKSAPEKHARESQKQPSDKSSTKGKRKHKQNEDENRASESKKTKLEEKAPSGHKNSSSRESSKPSAVKEKDLLPSPAAPALQKDSKQEHGSRKRTVSQSSSLKSSSNPGKESSSGSKSSSSSKQKKTEGKGSNSAKEAKEKILNNSSSCPPASAQATESVKSRRAKLIFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQALLYLRLFKLKKESALKYSKTLTEHLKNCYNNSQAPSPGMGSKPVGMPSPVSPKLSPGNSGNYSSGAANPSGSGSSVTIPQRIHQMAASYVQVTSNFLYATEIWEQAEQLSREQKEFFAELDKVMGPLVFNTSIMTELVRYTRQGLHWLRLDAK
SIO_010081: AFF4
subclass of: SO_0000673
so part of: AFF4
location: join(1254027..1254149,1255546..1256322,1257626..1257670,1258540..1258626,1263665..1263701,1265194..1265242,1266438..1266458,1267020..1267074,1268047..1268084,1268482..1268644,1269123..1270040,1272178..1272266,1273748..1273985,1275009..1275106,1275635..1275698,1275843..1275979,1276382..1276453,1277119..1277212,1277918..1277961,1278738..1278958,1279499..1279617)
location: region:1254027-1279617:1
so has part: feature:1254027-1254149:1:exon
so has part: feature:1255546-1256322:1:exon
so has part: feature:1257626-1257670:1:exon
so has part: feature:1258540-1258626:1:exon
so has part: feature:1263665-1263701:1:exon
so has part: feature:1265194-1265242:1:exon
so has part: feature:1266438-1266458:1:exon
so has part: feature:1267020-1267074:1:exon
so has part: feature:1268047-1268084:1:exon
so has part: feature:1268482-1268644:1:exon
so has part: feature:1269123-1270040:1:exon
so has part: feature:1272178-1272266:1:exon
so has part: feature:1273748-1273985:1:exon
so has part: feature:1275009-1275106:1:exon
so has part: feature:1275635-1275698:1:exon
so has part: feature:1275843-1275979:1:exon
so has part: feature:1276382-1276453:1:exon
so has part: feature:1277119-1277212:1:exon
so has part: feature:1277918-1277961:1:exon
so has part: feature:1278738-1278958:1:exon
so has part: feature:1279499-1279617:1:exon

XP_031980437.1
type: Protein
SIO_000068: ncbiprotein

position:1254027:1
position: 1254027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279617:1
position: 1279617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254027-1254149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1255546-1256322:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1257626-1257670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1258540-1258626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1263665-1263701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1265194-1265242:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1266438-1266458:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1267020-1267074:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1268047-1268084:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1268482-1268644:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1269123-1270040:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1272178-1272266:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1273748-1273985:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1275009-1275106:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1275635-1275698:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1275843-1275979:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1276382-1276453:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1277119-1277212:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1277918-1277961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1278738-1278958:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1279499-1279617:1:exon

LEAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LEAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1285110..1287365)
location: region:1285110-1287365:-1
so has part: feature:1285110-1287365:-1:exon
subclass of: SO_0000010

116451305
type: Gene
SIO_000068: ncbigene

position:1285110:-1
position: 1285110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287365:-1
position: 1287365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285110-1287365:-1:exon

LEAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LEAP2
product: liver enriched antimicrobial peptide 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032124548.1
SIO_010081: LEAP2
subclass of: SO_0000673
so part of: LEAP2
location: complement(join(1285110..1285445,1286440..1286591,1287015..1287365))
location: region:1285110-1287365:-1
so has part: feature:1287015-1287365:-1:exon
so has part: feature:1286440-1286591:-1:exon
so has part: feature:1285110-1285445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1287015-1287365:-1:exon

position:1287015:-1
position: 1287015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1286440-1286591:-1:exon

position:1286440:-1
position: 1286440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286591:-1
position: 1286591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1285110-1285445:-1:exon

position:1285445:-1
position: 1285445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LEAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LEAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liver-expressed antimicrobial peptide 2
translation: MHWWKVMAALLLCSLLLSQTHGVSLSLSQPHSQPRSPRQRRMTPFWRGVSLRPIGASCRDNSECLTMLCRKNRCLLSTASA
SIO_010081: LEAP2
subclass of: SO_0000673
so part of: LEAP2
location: complement(join(1285409..1285445,1286440..1286591,1287015..1287071))
location: region:1285409-1287071:-1
so has part: feature:1287015-1287071:-1:exon
so has part: feature:1286440-1286591:-1:exon
so has part: feature:1285409-1285445:-1:exon

XP_031980439.1
type: Protein
SIO_000068: ncbiprotein

position:1285409:-1
position: 1285409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287071:-1
position: 1287071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287015-1287071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1286440-1286591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285409-1285445:-1:exon

LOC116451304
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1291405..1292392)
location: region:1291405-1292392:-1
so has part: feature:1291405-1292392:-1:exon
subclass of: SO_0000010

116451304
type: Gene
SIO_000068: ncbigene

position:1291405:-1
position: 1291405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292392:-1
position: 1292392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291405-1292392:-1:exon

LOC116451304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116451304
product: cytochrome b-c1 complex subunit 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 140 samples with support for all annotated introns
transcript id: XM_032124547.1
SIO_010081: LOC116451304
subclass of: SO_0000673
so part of: LOC116451304
location: complement(join(1291405..1291633,1292088..1292392))
location: region:1291405-1292392:-1
so has part: feature:1292088-1292392:-1:exon
so has part: feature:1291405-1291633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1292088-1292392:-1:exon

position:1292088:-1
position: 1292088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1291405-1291633:-1:exon

position:1291633:-1
position: 1291633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116451304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b-c1 complex subunit 8
translation: MGKHFGNLARVRHVITYSLSPFEQRAFPNVLSHGLPNVARRFTSQVLKVVPPLATGYLIYSWGTQEFERLKRKNAAGHEHEQ
SIO_010081: LOC116451304
subclass of: SO_0000673
so part of: LOC116451304
location: complement(join(1291539..1291633,1292088..1292241))
location: region:1291539-1292241:-1
so has part: feature:1292088-1292241:-1:exon
so has part: feature:1291539-1291633:-1:exon

XP_031980438.1
type: Protein
SIO_000068: ncbiprotein

position:1291539:-1
position: 1291539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292241:-1
position: 1292241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292088-1292241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291539-1291633:-1:exon

GDF9
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: GDF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1292929..1299028)
location: region:1292929-1299028:-1
so has part: feature:1292929-1299028:-1:exon
subclass of: SO_0000010

116451590
type: Gene
SIO_000068: ncbigene

position:1292929:-1
position: 1292929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299028:-1
position: 1299028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292929-1299028:-1:exon

GDF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: GDF9
product: growth differentiation factor 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032125218.1
SIO_010081: GDF9
subclass of: SO_0000673
so part of: GDF9
location: complement(join(1292929..1295788,1296853..1297293,1298949..1299028))
location: region:1292929-1299028:-1
so has part: feature:1298949-1299028:-1:exon
so has part: feature:1296853-1297293:-1:exon
so has part: feature:1292929-1295788:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298949-1299028:-1:exon

position:1298949:-1
position: 1298949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1296853-1297293:-1:exon

position:1296853:-1
position: 1296853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297293:-1
position: 1297293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1292929-1295788:-1:exon

position:1295788:-1
position: 1295788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GDF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: GDF9
product: growth differentiation factor 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_032125219.1
SIO_010081: GDF9
subclass of: SO_0000673
so part of: GDF9
location: complement(join(1292929..1295788,1296853..1297444))
location: region:1292929-1297444:-1
so has part: feature:1296853-1297444:-1:exon
so has part: feature:1292929-1295788:-1:exon

position:1297444:-1
position: 1297444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296853-1297444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292929-1295788:-1:exon

GDF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: GDF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 9
translation: MESTWRICVCLYCCLPWLSSGTQYSPRSRGQGGSEKAPGFSAAPEDAARELSAVLQLPRGGGPAPTLLPPLLKVLHGRGPRGWHSEAPRLQPDSRALRYMKRLYRMSATREGIPKAHRGRFYNTVRLFTPCWERQHRLGGLGKGDVHSVDLLFNLDRVTALEHLLKSVLLYSFDTSVPISSSITCICHLSLKEHDSSSQVCPSISHSLALSLHFDVRKRKWVEMDVTSFLQPLIATNRRNVHMALNFTCLMGDPQQSTKLQNAVNVTLVPPSLLLYLNDTSEQAYHRGSLLRHRRKSPARARQSSSLLVDPPKGDKGQGNPQGKRASRQRRNENPKAAPATSPHNLSEYLKQFVLPQHECELHNFRLSFSQLRWDRWIIAPHRYSPQFCRGDCPRALGHRYGSPVHAMVQTLIYERLDPSVPRPSCVPAAYSPLSVLTIEPDGSIAYKEYEDMIATKCTCR
SIO_010081: GDF9
subclass of: SO_0000673
so part of: GDF9
location: complement(join(1294833..1295788,1296853..1297282))
location: region:1294833-1297282:-1
so has part: feature:1296853-1297282:-1:exon
so has part: feature:1294833-1295788:-1:exon

XP_031981109.1
type: Protein
SIO_000068: ncbiprotein

position:1294833:-1
position: 1294833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297282:-1
position: 1297282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296853-1297282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1294833-1295788:-1:exon

GDF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: GDF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 9
translation: MESTWRICVCLYCCLPWLSSGTQYSPRSRGQGGSEKAPGFSAAPEDAARELSAVLQLPRGGGPAPTLLPPLLKVLHGRGPRGWHSEAPRLQPDSRALRYMKRLYRMSATREGIPKAHRGRFYNTVRLFTPCWERQHRLGGLGKGDVHSVDLLFNLDRVTALEHLLKSVLLYSFDTSVPISSSITCICHLSLKEHDSSSQVCPSISHSLALSLHFDVRKRKWVEMDVTSFLQPLIATNRRNVHMALNFTCLMGDPQQSTKLQNAVNVTLVPPSLLLYLNDTSEQAYHRGSLLRHRRKSPARARQSSSLLVDPPKGDKGQGNPQGKRASRQRRNENPKAAPATSPHNLSEYLKQFVLPQHECELHNFRLSFSQLRWDRWIIAPHRYSPQFCRGDCPRALGHRYGSPVHAMVQTLIYERLDPSVPRPSCVPAAYSPLSVLTIEPDGSIAYKEYEDMIATKCTCR
SIO_010081: GDF9
subclass of: SO_0000673
so part of: GDF9
location: complement(join(1294833..1295788,1296853..1297282))
location: region:1294833-1297282:-1
so has part: feature:1296853-1297282:-1:exon
so has part: feature:1294833-1295788:-1:exon

XP_031981110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1296853-1297282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1294833-1295788:-1:exon

LOC116451593
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1297464..1308932
location: region:1297464-1308932:1
so has part: feature:1297464-1308932:1:exon
subclass of: SO_0000011

116451593
type: Gene
SIO_000068: ncbigene

position:1297464:1
position: 1297464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308932:1
position: 1308932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297464-1308932:1:exon

LOC116451593
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451593
product: uncharacterized LOC116451593
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004243238.1
SIO_010081: LOC116451593
subclass of: SO_0000673
so part of: LOC116451593
location: join(1297464..1298035,1298135..1302013,1308335..1308932)
location: region:1297464-1308932:1
so has part: feature:1297464-1298035:1:exon
so has part: feature:1298135-1302013:1:exon
so has part: feature:1308335-1308932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1297464-1298035:1:exon

position:1298035:1
position: 1298035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1298135-1302013:1:exon

position:1298135:1
position: 1298135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302013:1
position: 1302013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1308335-1308932:1:exon

position:1308335:1
position: 1308335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1QTNF2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: C1QTNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1304645..1307124
location: region:1304645-1307124:1
so has part: feature:1304645-1307124:1:exon
subclass of: SO_0000010

116451591
type: Gene
SIO_000068: ncbigene

position:1304645:1
position: 1304645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1307124:1
position: 1307124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304645-1307124:1:exon

C1QTNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: C1QTNF2
product: C1q and TNF related 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_032125220.1
SIO_010081: C1QTNF2
subclass of: SO_0000673
so part of: C1QTNF2
location: join(1304645..1304970,1306171..1307124)
location: region:1304645-1307124:1
so has part: feature:1304645-1304970:1:exon
so has part: feature:1306171-1307124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1304645-1304970:1:exon

position:1304970:1
position: 1304970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1306171-1307124:1:exon

position:1306171:1
position: 1306171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1QTNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: C1QTNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q tumor necrosis factor-related protein 2
translation: MISAVLLLWTVPCVANHILGGFARRELQEGAQLACSLPGPPGPPGVPGTPGTVGRMGFPGKDGKDGQDGEKGEHGDEGPQGRTGNPGKPGPKGKTGAIGKAGPRGPKGSKGSPGKNGAPGKKGPKGSQGDPGLPGACSCSGSKAKSAFSVAVSKSYPRERLPIKFDRILMNEGGHYNASSGKFICSIPGIYYFTYDITLANKHLAIGLVYNGQYRIKTFDANTGNHDVASGSTILELKQEDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYPDQDYLNEV
SIO_010081: C1QTNF2
subclass of: SO_0000673
so part of: C1QTNF2
location: join(1304739..1304970,1306171..1306784)
location: region:1304739-1306784:1
so has part: feature:1304739-1304970:1:exon
so has part: feature:1306171-1306784:1:exon

XP_031981111.1
type: Protein
SIO_000068: ncbiprotein

position:1304739:1
position: 1304739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306784:1
position: 1306784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304739-1304970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1306171-1306784:1:exon

FABP6
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: FABP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1308075..1310011)
location: region:1308075-1310011:-1
so has part: feature:1308075-1310011:-1:exon
subclass of: SO_0000010

116451592
type: Gene
SIO_000068: ncbigene

position:1308075:-1
position: 1308075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1310011:-1
position: 1310011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1308075-1310011:-1:exon

FABP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FABP6
product: fatty acid binding protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032125221.1
SIO_010081: FABP6
subclass of: SO_0000673
so part of: FABP6
location: complement(join(1308075..1308173,1308363..1308452,1308926..1309101,1309933..1310011))
location: region:1308075-1310011:-1
so has part: feature:1309933-1310011:-1:exon
so has part: feature:1308926-1309101:-1:exon
so has part: feature:1308363-1308452:-1:exon
so has part: feature:1308075-1308173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1309933-1310011:-1:exon

position:1309933:-1
position: 1309933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1308926-1309101:-1:exon

position:1308926:-1
position: 1308926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309101:-1
position: 1309101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1308363-1308452:-1:exon

position:1308363:-1
position: 1308363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308452:-1
position: 1308452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1308075-1308173:-1:exon

position:1308173:-1
position: 1308173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FABP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FABP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrotropin
translation: MAFAGKYEFEGDENYDAFVQKIGLPSDKVEMGRNCKIVTEVVQNGNDFTWTQHFPGGHTTTNSFTVGKEADMETMGGKKFKATVKMEDGKLVADFPNYRHTAEISGGKLVEISTSSGVVYKRTSKKIA
SIO_010081: FABP6
subclass of: SO_0000673
so part of: FABP6
location: complement(join(1308120..1308173,1308363..1308452,1308926..1309101,1309933..1309999))
location: region:1308120-1309999:-1
so has part: feature:1309933-1309999:-1:exon
so has part: feature:1308926-1309101:-1:exon
so has part: feature:1308363-1308452:-1:exon
so has part: feature:1308120-1308173:-1:exon

XP_031981112.1
type: Protein
SIO_000068: ncbiprotein

position:1308120:-1
position: 1308120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309999:-1
position: 1309999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1309933-1309999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1308926-1309101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1308363-1308452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1308120-1308173:-1:exon

PWWP2A
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PWWP2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1327030..1360162
location: region:1327030-1360162:1
so has part: feature:1327030-1360162:1:exon
subclass of: SO_0000010

116451334
type: Gene
SIO_000068: ncbigene

position:1327030:1
position: 1327030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360162:1
position: 1360162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327030-1360162:1:exon

PWWP2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PWWP2A
product: PWWP domain containing 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032124640.1
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(1327030..1327746,1338070..1339776,1356025..1356041)
location: region:1327030-1356041:1
so has part: feature:1327030-1327746:1:exon
so has part: feature:1338070-1339776:1:exon
so has part: feature:1356025-1356041:1:exon

position:1356041:1
position: 1356041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327030-1327746:1:exon

position:1327746:1
position: 1327746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339776:1:exon

position:1338070:1
position: 1338070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339776:1
position: 1339776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1356025-1356041:1:exon

position:1356025:1
position: 1356025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PWWP2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PWWP2A
product: PWWP domain containing 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_032124639.1
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(1327030..1327746,1338070..1339776,1348695..1351331)
location: region:1327030-1351331:1
so has part: feature:1327030-1327746:1:exon
so has part: feature:1338070-1339776:1:exon
so has part: feature:1348695-1351331:1:exon

position:1351331:1
position: 1351331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327030-1327746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348695-1351331:1:exon

position:1348695:1
position: 1348695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PWWP2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PWWP2A
product: PWWP domain containing 2A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_032124642.1
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(1327033..1327746,1338070..1339037,1340850..1342841)
location: region:1327033-1342841:1
so has part: feature:1327033-1327746:1:exon
so has part: feature:1338070-1339037:1:exon
so has part: feature:1340850-1342841:1:exon

position:1327033:1
position: 1327033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342841:1
position: 1342841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327033-1327746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339037:1:exon

position:1339037:1
position: 1339037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1340850-1342841:1:exon

position:1340850:1
position: 1340850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PWWP2A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: PWWP2A
product: PWWP domain containing 2A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_004243180.1
SIO_010081: PWWP2A
so part of: PWWP2A
location: join(1327034..1327746,1338070..1339037,1356025..1356105,1356719..1356882,1357355..1360162)
location: region:1327034-1360162:1
so has part: feature:1327034-1327746:1:exon
so has part: feature:1338070-1339037:1:exon
so has part: feature:1356025-1356105:1:exon
so has part: feature:1356719-1356882:1:exon
so has part: feature:1357355-1360162:1:exon

position:1327034:1
position: 1327034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327034-1327746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1356025-1356105:1:exon

position:1356105:1
position: 1356105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1356719-1356882:1:exon

position:1356719:1
position: 1356719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356882:1
position: 1356882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1357355-1360162:1:exon

position:1357355:1
position: 1357355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PWWP2A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: PWWP2A
product: PWWP domain containing 2A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XR_004243179.1
SIO_010081: PWWP2A
so part of: PWWP2A
location: join(1327034..1327746,1338070..1339037,1356025..1356105,1356719..1356882,1358606..1360162)
location: region:1327034-1360162:1
so has part: feature:1327034-1327746:1:exon
so has part: feature:1338070-1339037:1:exon
so has part: feature:1356025-1356105:1:exon
so has part: feature:1356719-1356882:1:exon
so has part: feature:1358606-1360162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1327034-1327746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1356025-1356105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1356719-1356882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358606-1360162:1:exon

position:1358606:1
position: 1358606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PWWP2A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: PWWP2A
product: PWWP domain containing 2A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_004243181.1
SIO_010081: PWWP2A
so part of: PWWP2A
location: join(1327034..1327746,1338070..1339037,1356025..1356105,1356719..1356882,1358606..1358755,1358837..1360162)
location: region:1327034-1360162:1
so has part: feature:1327034-1327746:1:exon
so has part: feature:1338070-1339037:1:exon
so has part: feature:1356025-1356105:1:exon
so has part: feature:1356719-1356882:1:exon
so has part: feature:1358606-1358755:1:exon
so has part: feature:1358837-1360162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1327034-1327746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1356025-1356105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1356719-1356882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358606-1358755:1:exon

position:1358755:1
position: 1358755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1358837-1360162:1:exon

position:1358837:1
position: 1358837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PWWP2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PWWP2A
product: PWWP domain containing 2A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XM_032124643.1
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(1327034..1327746,1338070..1339037,1348695..1351331)
location: region:1327034-1351331:1
so has part: feature:1327034-1327746:1:exon
so has part: feature:1338070-1339037:1:exon
so has part: feature:1348695-1351331:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1327034-1327746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348695-1351331:1:exon

PWWP2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PWWP2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWWP domain-containing protein 2A isoform X3
translation: MAAMAAEAAATAAVPGDGGAGEAEPEMEPIPGSEAGADPLPAVSEAVESAVPDGEEADGGKAEEPPPVQRARSPGGTREPDAGRTEEPPPPRSSGVESPRAEPRAAPSPGCSEPPQPCPPPEPAREPPQPCPPAAGGSAGPGEEPPRPEEEEPDAAAAAAAEPEPAVPAVPGGGEAEAPALLPGSEVRVTLDHIIEDALVVSFRLGEKLFSGVLMDLSKRFGPHGIPVTIFPKREYKDKPEAMQLQSKPFQEEAQVKCEASAAVPDDSSLTQPSEPSIAKSLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIKKGGNASDSSKYEDSKKRRNESVTTVNKKLKTDHKVDGKSQNESQKRNAVVKVSNIAHSRSRVVKVSAQANTSKAQLNTKKVLQSKNMDHAKAREVLKMAKEKAQKKQSATSSSKNAHSKVHFTRRLQNTSSGSLPPRLRLKPQRYRNEENDSSLKTGLEKIRSGKMATKPQSRCSSTRSAAQRH
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(1327088..1327746,1338070..1339037,1348695..1348708)
location: region:1327088-1348708:1
so has part: feature:1327088-1327746:1:exon
so has part: feature:1338070-1339037:1:exon
so has part: feature:1348695-1348708:1:exon

XP_031980534.1
type: Protein
SIO_000068: ncbiprotein

position:1327088:1
position: 1327088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348708:1
position: 1348708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327088-1327746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348695-1348708:1:exon

PWWP2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PWWP2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWWP domain-containing protein 2A isoform X2
translation: MAAMAAEAAATAAVPGDGGAGEAEPEMEPIPGSEAGADPLPAVSEAVESAVPDGEEADGGKAEEPPPVQRARSPGGTREPDAGRTEEPPPPRSSGVESPRAEPRAAPSPGCSEPPQPCPPPEPAREPPQPCPPAAGGSAGPGEEPPRPEEEEPDAAAAAAAEPEPAVPAVPGGGEAEAPALLPGSEVRVTLDHIIEDALVVSFRLGEKLFSGVLMDLSKRFGPHGIPVTIFPKREYKDKPEAMQLQSKPFQEEAQVKCEASAAVPDDSSLTQPSEPSIAKSLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIKKGGNASDSSKYEDSKKRRNESVTTVNKKLKTDHKVDGKSQNESQKRNAVVKVSNIAHSRSRVVKVSAQANTSKAQLNTKKVLQSKNMDHAKAREVLKMAKEKAQKKQSATSSSKNAHSKVHFTRRLQNTSSGSLPPRLRLKPQRYRNEENDSSLKTGLEKIRSGKMATKPQSRCSSTRSAGICLQVRKMRICNCVML
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(1327088..1327746,1338070..1339037,1340850..1340902)
location: region:1327088-1340902:1
so has part: feature:1327088-1327746:1:exon
so has part: feature:1338070-1339037:1:exon
so has part: feature:1340850-1340902:1:exon

XP_031980533.1
type: Protein
SIO_000068: ncbiprotein

position:1340902:1
position: 1340902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327088-1327746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1340850-1340902:1:exon

PWWP2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PWWP2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWWP domain-containing protein 2A isoform X1
translation: MAAMAAEAAATAAVPGDGGAGEAEPEMEPIPGSEAGADPLPAVSEAVESAVPDGEEADGGKAEEPPPVQRARSPGGTREPDAGRTEEPPPPRSSGVESPRAEPRAAPSPGCSEPPQPCPPPEPAREPPQPCPPAAGGSAGPGEEPPRPEEEEPDAAAAAAAEPEPAVPAVPGGGEAEAPALLPGSEVRVTLDHIIEDALVVSFRLGEKLFSGVLMDLSKRFGPHGIPVTIFPKREYKDKPEAMQLQSKPFQEEAQVKCEASAAVPDDSSLTQPSEPSIAKSLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIKKGGNASDSSKYEDSKKRRNESVTTVNKKLKTDHKVDGKSQNESQKRNAVVKVSNIAHSRSRVVKVSAQANTSKAQLNTKKVLQSKNMDHAKAREVLKMAKEKAQKKQSATSSSKNAHSKVHFTRRLQNTSSGSLPPRLRLKPQRYRNEENDSSLKTGLEKIRSGKMATKPQSRCSSTRSAGEAPSETQSPSEGPEEASSEVQDTSEVHVTVDQDEQQTLGKRGSKSNITVYMTLNQKKSDSSSASVCSSDSTDDLKSTNSECSSTESFDFPPGSMHAPSSSSSSSSSSSKEEKKLSNSLKTEVFSKNVSKCVTPDGRTVCVGDIVWAKIYGFPWWPARILTITVSRKDTGLLVRQEARISWFGSTTTSFLALAQLSPFLESFQLRFNKKRKGLYRKAVTEAAKAAKQLTPEVRALLTQFET
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(1327088..1327746,1338070..1339762)
location: region:1327088-1339762:1
so has part: feature:1327088-1327746:1:exon
so has part: feature:1338070-1339762:1:exon

XP_031980530.1
type: Protein
SIO_000068: ncbiprotein

position:1339762:1
position: 1339762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327088-1327746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339762:1:exon

PWWP2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PWWP2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWWP domain-containing protein 2A isoform X1
translation: MAAMAAEAAATAAVPGDGGAGEAEPEMEPIPGSEAGADPLPAVSEAVESAVPDGEEADGGKAEEPPPVQRARSPGGTREPDAGRTEEPPPPRSSGVESPRAEPRAAPSPGCSEPPQPCPPPEPAREPPQPCPPAAGGSAGPGEEPPRPEEEEPDAAAAAAAEPEPAVPAVPGGGEAEAPALLPGSEVRVTLDHIIEDALVVSFRLGEKLFSGVLMDLSKRFGPHGIPVTIFPKREYKDKPEAMQLQSKPFQEEAQVKCEASAAVPDDSSLTQPSEPSIAKSLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIKKGGNASDSSKYEDSKKRRNESVTTVNKKLKTDHKVDGKSQNESQKRNAVVKVSNIAHSRSRVVKVSAQANTSKAQLNTKKVLQSKNMDHAKAREVLKMAKEKAQKKQSATSSSKNAHSKVHFTRRLQNTSSGSLPPRLRLKPQRYRNEENDSSLKTGLEKIRSGKMATKPQSRCSSTRSAGEAPSETQSPSEGPEEASSEVQDTSEVHVTVDQDEQQTLGKRGSKSNITVYMTLNQKKSDSSSASVCSSDSTDDLKSTNSECSSTESFDFPPGSMHAPSSSSSSSSSSSKEEKKLSNSLKTEVFSKNVSKCVTPDGRTVCVGDIVWAKIYGFPWWPARILTITVSRKDTGLLVRQEARISWFGSTTTSFLALAQLSPFLESFQLRFNKKRKGLYRKAVTEAAKAAKQLTPEVRALLTQFET
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(1327088..1327746,1338070..1339762)
location: region:1327088-1339762:1
so has part: feature:1327088-1327746:1:exon
so has part: feature:1338070-1339762:1:exon

XP_031980531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1327088-1327746:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338070-1339762:1:exon

TTC1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1357843..1378251)
location: region:1357843-1378251:-1
so has part: feature:1357843-1378251:-1:exon
subclass of: SO_0000010

116451335
type: Gene
SIO_000068: ncbigene

position:1357843:-1
position: 1357843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378251:-1
position: 1378251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1357843-1378251:-1:exon

TTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TTC1
product: tetratricopeptide repeat domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032124644.1
SIO_010081: TTC1
subclass of: SO_0000673
so part of: TTC1
location: complement(join(1357843..1358649,1363069..1363123,1365097..1365245,1366965..1367001,1367228..1367340,1368481..1368541,1376714..1377040,1378146..1378251))
location: region:1357843-1378251:-1
so has part: feature:1378146-1378251:-1:exon
so has part: feature:1376714-1377040:-1:exon
so has part: feature:1368481-1368541:-1:exon
so has part: feature:1367228-1367340:-1:exon
so has part: feature:1366965-1367001:-1:exon
so has part: feature:1365097-1365245:-1:exon
so has part: feature:1363069-1363123:-1:exon
so has part: feature:1357843-1358649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378146-1378251:-1:exon

position:1378146:-1
position: 1378146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1376714-1377040:-1:exon

position:1376714:-1
position: 1376714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377040:-1
position: 1377040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1368481-1368541:-1:exon

position:1368481:-1
position: 1368481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368541:-1
position: 1368541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1367228-1367340:-1:exon

position:1367228:-1
position: 1367228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367340:-1
position: 1367340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1366965-1367001:-1:exon

position:1366965:-1
position: 1366965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367001:-1
position: 1367001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1365097-1365245:-1:exon

position:1365097:-1
position: 1365097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365245:-1
position: 1365245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1363069-1363123:-1:exon

position:1363069:-1
position: 1363069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363123:-1
position: 1363123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1357843-1358649:-1:exon

position:1358649:-1
position: 1358649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TTC1
product: tetratricopeptide repeat domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_032124645.1
SIO_010081: TTC1
subclass of: SO_0000673
so part of: TTC1
location: complement(join(1357843..1358649,1363069..1363123,1365097..1365245,1366965..1367001,1367228..1367340,1368481..1368541,1376714..1377040,1377753..1377937))
location: region:1357843-1377937:-1
so has part: feature:1377753-1377937:-1:exon
so has part: feature:1376714-1377040:-1:exon
so has part: feature:1368481-1368541:-1:exon
so has part: feature:1367228-1367340:-1:exon
so has part: feature:1366965-1367001:-1:exon
so has part: feature:1365097-1365245:-1:exon
so has part: feature:1363069-1363123:-1:exon
so has part: feature:1357843-1358649:-1:exon

position:1377937:-1
position: 1377937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377753-1377937:-1:exon

position:1377753:-1
position: 1377753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1376714-1377040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1368481-1368541:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1367228-1367340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1366965-1367001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365097-1365245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1363069-1363123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357843-1358649:-1:exon

TTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 1
translation: MEEFKDASLPDELLNHMKLSDQKCPETGPSDAQHPQSFGSGCASSPGQDPTEESFHDCQDSFEAKGPVLDDEGNVQDEGSSSRKQTELDEEYLLELEKDMPEEEKQKRRKESKGLKEKGNEHFKKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALTDCTKAVELDPHYVRALLRRAELYEKTEKLDEALEDYKAVLERDQSVHQAREACMRLPQQIEERNEKLKKEMLDKLKDLGNLVLRPFGLSTENFQVKQDSSTGSYSINFVQNPNNNR
SIO_010081: TTC1
subclass of: SO_0000673
so part of: TTC1
location: complement(join(1358516..1358649,1363069..1363123,1365097..1365245,1366965..1367001,1367228..1367340,1368481..1368541,1376714..1377031))
location: region:1358516-1377031:-1
so has part: feature:1376714-1377031:-1:exon
so has part: feature:1368481-1368541:-1:exon
so has part: feature:1367228-1367340:-1:exon
so has part: feature:1366965-1367001:-1:exon
so has part: feature:1365097-1365245:-1:exon
so has part: feature:1363069-1363123:-1:exon
so has part: feature:1358516-1358649:-1:exon

XP_031980535.1
type: Protein
SIO_000068: ncbiprotein

position:1358516:-1
position: 1358516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377031:-1
position: 1377031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376714-1377031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1368481-1368541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1367228-1367340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366965-1367001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365097-1365245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363069-1363123:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358516-1358649:-1:exon

TTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 1
translation: MEEFKDASLPDELLNHMKLSDQKCPETGPSDAQHPQSFGSGCASSPGQDPTEESFHDCQDSFEAKGPVLDDEGNVQDEGSSSRKQTELDEEYLLELEKDMPEEEKQKRRKESKGLKEKGNEHFKKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALTDCTKAVELDPHYVRALLRRAELYEKTEKLDEALEDYKAVLERDQSVHQAREACMRLPQQIEERNEKLKKEMLDKLKDLGNLVLRPFGLSTENFQVKQDSSTGSYSINFVQNPNNNR
SIO_010081: TTC1
subclass of: SO_0000673
so part of: TTC1
location: complement(join(1358516..1358649,1363069..1363123,1365097..1365245,1366965..1367001,1367228..1367340,1368481..1368541,1376714..1377031))
location: region:1358516-1377031:-1
so has part: feature:1376714-1377031:-1:exon
so has part: feature:1368481-1368541:-1:exon
so has part: feature:1367228-1367340:-1:exon
so has part: feature:1366965-1367001:-1:exon
so has part: feature:1365097-1365245:-1:exon
so has part: feature:1363069-1363123:-1:exon
so has part: feature:1358516-1358649:-1:exon

XP_031980536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1376714-1377031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1368481-1368541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1367228-1367340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1366965-1367001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365097-1365245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363069-1363123:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358516-1358649:-1:exon

LOC116451336
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1372846..1376702)
location: region:1372846-1376702:-1
so has part: feature:1372846-1376702:-1:exon
subclass of: SO_0000011

116451336
type: Gene
SIO_000068: ncbigene

position:1372846:-1
position: 1372846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376702:-1
position: 1376702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1372846-1376702:-1:exon

LOC116451336
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451336
product: uncharacterized LOC116451336
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XR_004243182.1
SIO_010081: LOC116451336
subclass of: SO_0000673
so part of: LOC116451336
location: complement(join(1372846..1375789,1375928..1376702))
location: region:1372846-1376702:-1
so has part: feature:1375928-1376702:-1:exon
so has part: feature:1372846-1375789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1375928-1376702:-1:exon

position:1375928:-1
position: 1375928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1372846-1375789:-1:exon

position:1375789:-1
position: 1375789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADRA1B
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ADRA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1383201..1395050)
location: region:1383201-1395050:-1
so has part: feature:1383201-1395050:-1:exon
subclass of: SO_0000010

116451621
type: Gene
SIO_000068: ncbigene

position:1383201:-1
position: 1383201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395050:-1
position: 1395050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383201-1395050:-1:exon

ADRA1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ADRA1B
product: adrenoceptor alpha 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_032125259.1
SIO_010081: ADRA1B
subclass of: SO_0000673
so part of: ADRA1B
location: complement(join(1383201..1384036,1393656..1395050))
location: region:1383201-1395050:-1
so has part: feature:1393656-1395050:-1:exon
so has part: feature:1383201-1384036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1393656-1395050:-1:exon

position:1393656:-1
position: 1393656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1383201-1384036:-1:exon

position:1384036:-1
position: 1384036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADRA1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ADRA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1B adrenergic receptor
translation: MVFKMNTHLDDKSNTSIPGYFKGSALNYGNFSANNSNETGSNLDSPALATSRAIIVGLILGAFILFAIIGNILVILSVACNRHLRIPTNYFIINLAIADLLLSFTVLPFSATLEVLGYWALGRIFCDIWAAVDVLCCTASILSLCAISIDRYIGVRYSLQYPTLVTRRRAILALLGVWVLSMVISIGPLLGWKEPAPQDDRECRITEEPFYALFSSLGSFYIPLIVILVMYCRVYIVAKRTTRNLEAGVMKEMSNSKELTLRIHYKHEDTLNNTKSKGHNPRNSLAFKLLKFSREKKAAKTLGIVVGMFILCWLPFFIVLPLGSLFSALKPPETIFKVIFWLGYFNSCLNPIIYPCSSKEFKRAFIQILRCQCHRRKQLGWWPYSYRNWNRCSFEHARKDSLEDSGSFLSGSQRTLSSASPSPGYVSRISHPQLELCTLQEQRQCRFFTFQLPPERNGHGPAAGRGAADAPRGSP
SIO_010081: ADRA1B
subclass of: SO_0000673
so part of: ADRA1B
location: complement(join(1383576..1384036,1393656..1394622))
location: region:1383576-1394622:-1
so has part: feature:1393656-1394622:-1:exon
so has part: feature:1383576-1384036:-1:exon

XP_031981150.1
type: Protein
SIO_000068: ncbiprotein

position:1383576:-1
position: 1383576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394622:-1
position: 1394622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393656-1394622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383576-1384036:-1:exon

IL12B
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: IL12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1467128..1477327
location: region:1467128-1477327:1
so has part: feature:1467128-1477327:1:exon
subclass of: SO_0000010

116451635
type: Gene
SIO_000068: ncbigene

position:1467128:1
position: 1467128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477327:1
position: 1477327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1467128-1477327:1:exon

IL12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: IL12B
product: interleukin 12B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032125287.1
SIO_010081: IL12B
subclass of: SO_0000673
so part of: IL12B
location: join(1467128..1467271,1468136..1468549,1471521..1471605,1472475..1472750,1473523..1473640,1474563..1474756,1475492..1475637,1476848..1477327)
location: region:1467128-1477327:1
so has part: feature:1467128-1467271:1:exon
so has part: feature:1468136-1468549:1:exon
so has part: feature:1471521-1471605:1:exon
so has part: feature:1472475-1472750:1:exon
so has part: feature:1473523-1473640:1:exon
so has part: feature:1474563-1474756:1:exon
so has part: feature:1475492-1475637:1:exon
so has part: feature:1476848-1477327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1467128-1467271:1:exon

position:1467271:1
position: 1467271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1468136-1468549:1:exon

position:1468136:1
position: 1468136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468549:1
position: 1468549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1471521-1471605:1:exon

position:1471521:1
position: 1471521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471605:1
position: 1471605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1472475-1472750:1:exon

position:1472475:1
position: 1472475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472750:1
position: 1472750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1473523-1473640:1:exon

position:1473523:1
position: 1473523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473640:1
position: 1473640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1474563-1474756:1:exon

position:1474563:1
position: 1474563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474756:1
position: 1474756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1475492-1475637:1:exon

position:1475492:1
position: 1475492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475637:1
position: 1475637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1476848-1477327:1:exon

position:1476848:1
position: 1476848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: IL12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-12 subunit beta
translation: MSHLLRALLSLLSFAALLESAQWKLQENVFVIESQWNAEAPATTVELTCNTSEEAVYWKKDSEWKQEGKTLTAAVKEFPDAGNYTCLSQESHEVLDSNLLLIAKIDSKGQMMRWILKSFQEPKWTFLKCEAKNYSGIFTCSWMTENNSPNVKFTIRSLKGPQGDVSCSSPVPHTEGALTTYTAQCHKENFCAFAEEHQPIDIFLEVIDEVEYENYTASFFIRDIVKPDPPQCQYVATNGTVTWTYPRTWSTPNSYFPLTFKVKVKSTKRHKYQVYDTDEQSVQLPAPGPAEVSVQARDRCYLSSWSEWSSLCR
SIO_010081: IL12B
subclass of: SO_0000673
so part of: IL12B
location: join(1471521..1471605,1472475..1472750,1473523..1473640,1474563..1474756,1475492..1475637,1476848..1476970)
location: region:1471521-1476970:1
so has part: feature:1471521-1471605:1:exon
so has part: feature:1472475-1472750:1:exon
so has part: feature:1473523-1473640:1:exon
so has part: feature:1474563-1474756:1:exon
so has part: feature:1475492-1475637:1:exon
so has part: feature:1476848-1476970:1:exon

XP_031981178.1
type: Protein
SIO_000068: ncbiprotein

position:1476970:1
position: 1476970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471521-1471605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1472475-1472750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1473523-1473640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1474563-1474756:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1475492-1475637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1476848-1476970:1:exon

SPINK9
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SPINK9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1483361..1488571
location: region:1483361-1488571:1
so has part: feature:1483361-1488571:1:exon
subclass of: SO_0000010

116451636
type: Gene
SIO_000068: ncbigene

position:1483361:1
position: 1483361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488571:1
position: 1488571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483361-1488571:1:exon

SPINK9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SPINK9
product: serine peptidase inhibitor Kazal type 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032125288.1
SIO_010081: SPINK9
subclass of: SO_0000673
so part of: SPINK9
location: join(1483361..1483385,1484288..1484455,1486548..1486567,1487451..1487578,1488055..1488571)
location: region:1483361-1488571:1
so has part: feature:1483361-1483385:1:exon
so has part: feature:1484288-1484455:1:exon
so has part: feature:1486548-1486567:1:exon
so has part: feature:1487451-1487578:1:exon
so has part: feature:1488055-1488571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1483361-1483385:1:exon

position:1483385:1
position: 1483385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1484288-1484455:1:exon

position:1484288:1
position: 1484288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484455:1
position: 1484455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1486548-1486567:1:exon

position:1486548:1
position: 1486548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486567:1
position: 1486567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1487451-1487578:1:exon

position:1487451:1
position: 1487451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1487578:1
position: 1487578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1488055-1488571:1:exon

position:1488055:1
position: 1488055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPINK9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SPINK9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease inhibitor Kazal-type 9
translation: MREGISSPAPGYKLLPHSHGHTGDTAGTRERLWDSQGLVFAMKVTGTFVLLALAALCLAHAAEQNEVDCSEYRRLERGRPIYCERLYQPFCGSDGKTYNNKCSFCKAVLRSGGALHMKQAGAC
SIO_010081: SPINK9
subclass of: SO_0000673
so part of: SPINK9
location: join(1483376..1483385,1484288..1484455,1486548..1486567,1487451..1487578,1488055..1488100)
location: region:1483376-1488100:1
so has part: feature:1483376-1483385:1:exon
so has part: feature:1484288-1484455:1:exon
so has part: feature:1486548-1486567:1:exon
so has part: feature:1487451-1487578:1:exon
so has part: feature:1488055-1488100:1:exon

XP_031981179.1
type: Protein
SIO_000068: ncbiprotein

position:1483376:1
position: 1483376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1488100:1
position: 1488100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483376-1483385:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1484288-1484455:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1486548-1486567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1487451-1487578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1488055-1488100:1:exon

FBXO38
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1491440..1512392
location: region:1491440-1512392:1
so has part: feature:1491440-1512392:1:exon
subclass of: SO_0000010

116451428
type: Gene
SIO_000068: ncbigene

position:1491440:1
position: 1491440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512392:1
position: 1512392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491440-1512392:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FBXO38
product: F-box protein 38, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_032124891.1
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1491440..1491536,1493636..1493780,1494827..1494960,1496036..1496199,1496534..1496699,1497032..1497169,1497445..1497582,1497943..1498036,1498308..1498438,1498701..1498871,1499116..1499258,1500094..1500319,1500930..1501049,1501717..1501896,1503139..1503822,1505490..1505590,1505766..1505868,1506824..1506990,1508047..1508192,1510390..1510493,1510690..1510803,1511761..1512392)
location: region:1491440-1512392:1
so has part: feature:1491440-1491536:1:exon
so has part: feature:1493636-1493780:1:exon
so has part: feature:1494827-1494960:1:exon
so has part: feature:1496036-1496199:1:exon
so has part: feature:1496534-1496699:1:exon
so has part: feature:1497032-1497169:1:exon
so has part: feature:1497445-1497582:1:exon
so has part: feature:1497943-1498036:1:exon
so has part: feature:1498308-1498438:1:exon
so has part: feature:1498701-1498871:1:exon
so has part: feature:1499116-1499258:1:exon
so has part: feature:1500094-1500319:1:exon
so has part: feature:1500930-1501049:1:exon
so has part: feature:1501717-1501896:1:exon
so has part: feature:1503139-1503822:1:exon
so has part: feature:1505490-1505590:1:exon
so has part: feature:1505766-1505868:1:exon
so has part: feature:1506824-1506990:1:exon
so has part: feature:1508047-1508192:1:exon
so has part: feature:1510390-1510493:1:exon
so has part: feature:1510690-1510803:1:exon
so has part: feature:1511761-1512392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1491440-1491536:1:exon

position:1491536:1
position: 1491536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1493636-1493780:1:exon

position:1493636:1
position: 1493636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1493780:1
position: 1493780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1494827-1494960:1:exon

position:1494827:1
position: 1494827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494960:1
position: 1494960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1496036-1496199:1:exon

position:1496036:1
position: 1496036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496199:1
position: 1496199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1496534-1496699:1:exon

position:1496534:1
position: 1496534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1496699:1
position: 1496699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1497032-1497169:1:exon

position:1497032:1
position: 1497032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497169:1
position: 1497169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1497445-1497582:1:exon

position:1497445:1
position: 1497445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497582:1
position: 1497582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1497943-1498036:1:exon

position:1497943:1
position: 1497943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498036:1
position: 1498036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1498308-1498438:1:exon

position:1498308:1
position: 1498308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498438:1
position: 1498438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1498701-1498871:1:exon

position:1498701:1
position: 1498701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498871:1
position: 1498871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1499116-1499258:1:exon

position:1499116:1
position: 1499116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499258:1
position: 1499258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1500094-1500319:1:exon

position:1500094:1
position: 1500094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1500319:1
position: 1500319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1500930-1501049:1:exon

position:1500930:1
position: 1500930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1501049:1
position: 1501049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1501717-1501896:1:exon

position:1501717:1
position: 1501717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1501896:1
position: 1501896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1503139-1503822:1:exon

position:1503139:1
position: 1503139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1503822:1
position: 1503822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1505490-1505590:1:exon

position:1505490:1
position: 1505490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505590:1
position: 1505590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1505766-1505868:1:exon

position:1505766:1
position: 1505766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505868:1
position: 1505868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1506824-1506990:1:exon

position:1506824:1
position: 1506824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1506990:1
position: 1506990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1508047-1508192:1:exon

position:1508047:1
position: 1508047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1508192:1
position: 1508192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1510390-1510493:1:exon

position:1510390:1
position: 1510390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510493:1
position: 1510493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1510690-1510803:1:exon

position:1510690:1
position: 1510690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510803:1
position: 1510803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1511761-1512392:1:exon

position:1511761:1
position: 1511761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FBXO38
product: F-box protein 38, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 136 samples with support for all annotated introns
transcript id: XM_032124890.1
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1491440..1491536,1493639..1493780,1494827..1494960,1496036..1496199,1496534..1496699,1497032..1497169,1497445..1497582,1497943..1498036,1498308..1498438,1498701..1498871,1499116..1499258,1500094..1500319,1500930..1501049,1501717..1501896,1503139..1503822,1505490..1505590,1505766..1505868,1506824..1506990,1508047..1508192,1510390..1510493,1510690..1510803,1511761..1512392)
location: region:1491440-1512392:1
so has part: feature:1491440-1491536:1:exon
so has part: feature:1493639-1493780:1:exon
so has part: feature:1494827-1494960:1:exon
so has part: feature:1496036-1496199:1:exon
so has part: feature:1496534-1496699:1:exon
so has part: feature:1497032-1497169:1:exon
so has part: feature:1497445-1497582:1:exon
so has part: feature:1497943-1498036:1:exon
so has part: feature:1498308-1498438:1:exon
so has part: feature:1498701-1498871:1:exon
so has part: feature:1499116-1499258:1:exon
so has part: feature:1500094-1500319:1:exon
so has part: feature:1500930-1501049:1:exon
so has part: feature:1501717-1501896:1:exon
so has part: feature:1503139-1503822:1:exon
so has part: feature:1505490-1505590:1:exon
so has part: feature:1505766-1505868:1:exon
so has part: feature:1506824-1506990:1:exon
so has part: feature:1508047-1508192:1:exon
so has part: feature:1510390-1510493:1:exon
so has part: feature:1510690-1510803:1:exon
so has part: feature:1511761-1512392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1491440-1491536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1493639-1493780:1:exon

position:1493639:1
position: 1493639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1494827-1494960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496036-1496199:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1496534-1496699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497032-1497169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497445-1497582:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1497943-1498036:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498308-1498438:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1498701-1498871:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1499116-1499258:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1500094-1500319:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1500930-1501049:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1501717-1501896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1503139-1503822:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1505490-1505590:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1505766-1505868:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1506824-1506990:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1508047-1508192:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510390-1510493:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1510690-1510803:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1511761-1512392:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FBXO38
product: F-box protein 38, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_032124894.1
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1493636..1493780,1494827..1494960,1496112..1496199,1496534..1496699,1497032..1497169,1497445..1497582,1497943..1498036,1498308..1498438,1498701..1498871,1499116..1499258,1500094..1500319,1500930..1501049,1501717..1501896,1503139..1503822,1505490..1505590,1505766..1505868,1506824..1506990,1508047..1508192,1510390..1510493,1510690..1510803,1511761..1512392)
location: region:1493636-1512392:1
so has part: feature:1493636-1493780:1:exon
so has part: feature:1494827-1494960:1:exon
so has part: feature:1496112-1496199:1:exon
so has part: feature:1496534-1496699:1:exon
so has part: feature:1497032-1497169:1:exon
so has part: feature:1497445-1497582:1:exon
so has part: feature:1497943-1498036:1:exon
so has part: feature:1498308-1498438:1:exon
so has part: feature:1498701-1498871:1:exon
so has part: feature:1499116-1499258:1:exon
so has part: feature:1500094-1500319:1:exon
so has part: feature:1500930-1501049:1:exon
so has part: feature:1501717-1501896:1:exon
so has part: feature:1503139-1503822:1:exon
so has part: feature:1505490-1505590:1:exon
so has part: feature:1505766-1505868:1:exon
so has part: feature:1506824-1506990:1:exon
so has part: feature:1508047-1508192:1:exon
so has part: feature:1510390-1510493:1:exon
so has part: feature:1510690-1510803:1:exon
so has part: feature:1511761-1512392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1493636-1493780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494827-1494960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496112-1496199:1:exon

position:1496112:1
position: 1496112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1496534-1496699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497032-1497169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497445-1497582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497943-1498036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498308-1498438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498701-1498871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499116-1499258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1500094-1500319:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1500930-1501049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1501717-1501896:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1503139-1503822:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1505490-1505590:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1505766-1505868:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1506824-1506990:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1508047-1508192:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510390-1510493:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510690-1510803:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1511761-1512392:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X1
translation: MGPRRKTVKASAVSREGAGSTKAEEPKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVKVVDLCAGRWWEYMPTGFTDSSFLTLLRKMPDIEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNNPNIHHNNHQHPNEQNEENELRQEGPAEEQQIGAEALNEMEEVAQEEGVAAGQAQNELPAPSQAVVPMEVDEEQAGPSGIQPVVKAAPITIHDSDSEDEEENMGTSRACISNSIAQNYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSSSHGGQAKQFPSEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSSAPGSTATASSCSAASPSPDCAQPAQSHSAGSSPAAGEESRHCGCSPCKREGSSEREPEESSVCSRCSSRAAQHRTSGGCDGECPSTSGACRDGPDFALRTLPDCGAAGEPGDDRTSGSACGAGSQEQSTQPPSWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1493653..1493780,1494827..1494960,1496036..1496199,1496534..1496699,1497032..1497169,1497445..1497582,1497943..1498036,1498308..1498438,1498701..1498871,1499116..1499258,1500094..1500319,1500930..1501049,1501717..1501896,1503139..1503822,1505490..1505590,1505766..1505868,1506824..1506990,1508047..1508192,1510390..1510493,1510690..1510803,1511761..1511939)
location: region:1493653-1511939:1
so has part: feature:1493653-1493780:1:exon
so has part: feature:1494827-1494960:1:exon
so has part: feature:1496036-1496199:1:exon
so has part: feature:1496534-1496699:1:exon
so has part: feature:1497032-1497169:1:exon
so has part: feature:1497445-1497582:1:exon
so has part: feature:1497943-1498036:1:exon
so has part: feature:1498308-1498438:1:exon
so has part: feature:1498701-1498871:1:exon
so has part: feature:1499116-1499258:1:exon
so has part: feature:1500094-1500319:1:exon
so has part: feature:1500930-1501049:1:exon
so has part: feature:1501717-1501896:1:exon
so has part: feature:1503139-1503822:1:exon
so has part: feature:1505490-1505590:1:exon
so has part: feature:1505766-1505868:1:exon
so has part: feature:1506824-1506990:1:exon
so has part: feature:1508047-1508192:1:exon
so has part: feature:1510390-1510493:1:exon
so has part: feature:1510690-1510803:1:exon
so has part: feature:1511761-1511939:1:exon

XP_031980781.1
type: Protein
SIO_000068: ncbiprotein

position:1493653:1
position: 1493653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1511939:1
position: 1511939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493653-1493780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494827-1494960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496036-1496199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496534-1496699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497032-1497169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497445-1497582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497943-1498036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498308-1498438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498701-1498871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499116-1499258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1500094-1500319:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1500930-1501049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1501717-1501896:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1503139-1503822:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1505490-1505590:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1505766-1505868:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1506824-1506990:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1508047-1508192:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510390-1510493:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510690-1510803:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1511761-1511939:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X1
translation: MGPRRKTVKASAVSREGAGSTKAEEPKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVKVVDLCAGRWWEYMPTGFTDSSFLTLLRKMPDIEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNNPNIHHNNHQHPNEQNEENELRQEGPAEEQQIGAEALNEMEEVAQEEGVAAGQAQNELPAPSQAVVPMEVDEEQAGPSGIQPVVKAAPITIHDSDSEDEEENMGTSRACISNSIAQNYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSSSHGGQAKQFPSEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSSAPGSTATASSCSAASPSPDCAQPAQSHSAGSSPAAGEESRHCGCSPCKREGSSEREPEESSVCSRCSSRAAQHRTSGGCDGECPSTSGACRDGPDFALRTLPDCGAAGEPGDDRTSGSACGAGSQEQSTQPPSWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1493653..1493780,1494827..1494960,1496036..1496199,1496534..1496699,1497032..1497169,1497445..1497582,1497943..1498036,1498308..1498438,1498701..1498871,1499116..1499258,1500094..1500319,1500930..1501049,1501717..1501896,1503139..1503822,1505490..1505590,1505766..1505868,1506824..1506990,1508047..1508192,1510390..1510493,1510690..1510803,1511761..1511939)
location: region:1493653-1511939:1
so has part: feature:1493653-1493780:1:exon
so has part: feature:1494827-1494960:1:exon
so has part: feature:1496036-1496199:1:exon
so has part: feature:1496534-1496699:1:exon
so has part: feature:1497032-1497169:1:exon
so has part: feature:1497445-1497582:1:exon
so has part: feature:1497943-1498036:1:exon
so has part: feature:1498308-1498438:1:exon
so has part: feature:1498701-1498871:1:exon
so has part: feature:1499116-1499258:1:exon
so has part: feature:1500094-1500319:1:exon
so has part: feature:1500930-1501049:1:exon
so has part: feature:1501717-1501896:1:exon
so has part: feature:1503139-1503822:1:exon
so has part: feature:1505490-1505590:1:exon
so has part: feature:1505766-1505868:1:exon
so has part: feature:1506824-1506990:1:exon
so has part: feature:1508047-1508192:1:exon
so has part: feature:1510390-1510493:1:exon
so has part: feature:1510690-1510803:1:exon
so has part: feature:1511761-1511939:1:exon

XP_031980782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1493653-1493780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494827-1494960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496036-1496199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496534-1496699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497032-1497169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497445-1497582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497943-1498036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498308-1498438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498701-1498871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499116-1499258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1500094-1500319:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1500930-1501049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1501717-1501896:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1503139-1503822:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1505490-1505590:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1505766-1505868:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1506824-1506990:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1508047-1508192:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510390-1510493:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510690-1510803:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1511761-1511939:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FBXO38
product: F-box protein 38, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_032124893.1
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1493660..1493780,1494843..1494960,1496112..1496199,1496534..1496699,1497032..1497169,1497445..1497582,1497943..1498036,1498308..1498438,1498701..1498871,1499116..1499258,1500094..1500319,1500930..1501049,1501717..1501896,1503139..1503822,1505490..1505590,1505766..1505868,1506824..1506990,1508047..1508192,1510390..1510493,1510690..1510803,1511761..1512392)
location: region:1493660-1512392:1
so has part: feature:1493660-1493780:1:exon
so has part: feature:1494843-1494960:1:exon
so has part: feature:1496112-1496199:1:exon
so has part: feature:1496534-1496699:1:exon
so has part: feature:1497032-1497169:1:exon
so has part: feature:1497445-1497582:1:exon
so has part: feature:1497943-1498036:1:exon
so has part: feature:1498308-1498438:1:exon
so has part: feature:1498701-1498871:1:exon
so has part: feature:1499116-1499258:1:exon
so has part: feature:1500094-1500319:1:exon
so has part: feature:1500930-1501049:1:exon
so has part: feature:1501717-1501896:1:exon
so has part: feature:1503139-1503822:1:exon
so has part: feature:1505490-1505590:1:exon
so has part: feature:1505766-1505868:1:exon
so has part: feature:1506824-1506990:1:exon
so has part: feature:1508047-1508192:1:exon
so has part: feature:1510390-1510493:1:exon
so has part: feature:1510690-1510803:1:exon
so has part: feature:1511761-1512392:1:exon

position:1493660:1
position: 1493660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493660-1493780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494843-1494960:1:exon

position:1494843:1
position: 1494843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1496112-1496199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496534-1496699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497032-1497169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497445-1497582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497943-1498036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498308-1498438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498701-1498871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499116-1499258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1500094-1500319:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1500930-1501049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1501717-1501896:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1503139-1503822:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1505490-1505590:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1505766-1505868:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1506824-1506990:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1508047-1508192:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510390-1510493:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510690-1510803:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1511761-1512392:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FBXO38
product: F-box protein 38, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_032124892.1
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1493693..1493780,1494843..1494960,1496036..1496199,1496534..1496699,1497032..1497169,1497445..1497582,1497943..1498036,1498308..1498438,1498701..1498871,1499116..1499258,1500094..1500319,1500930..1501049,1501717..1501896,1503139..1503822,1505490..1505590,1505766..1505868,1506824..1506990,1508047..1508192,1510390..1510493,1510690..1510803,1511761..1512392)
location: region:1493693-1512392:1
so has part: feature:1493693-1493780:1:exon
so has part: feature:1494843-1494960:1:exon
so has part: feature:1496036-1496199:1:exon
so has part: feature:1496534-1496699:1:exon
so has part: feature:1497032-1497169:1:exon
so has part: feature:1497445-1497582:1:exon
so has part: feature:1497943-1498036:1:exon
so has part: feature:1498308-1498438:1:exon
so has part: feature:1498701-1498871:1:exon
so has part: feature:1499116-1499258:1:exon
so has part: feature:1500094-1500319:1:exon
so has part: feature:1500930-1501049:1:exon
so has part: feature:1501717-1501896:1:exon
so has part: feature:1503139-1503822:1:exon
so has part: feature:1505490-1505590:1:exon
so has part: feature:1505766-1505868:1:exon
so has part: feature:1506824-1506990:1:exon
so has part: feature:1508047-1508192:1:exon
so has part: feature:1510390-1510493:1:exon
so has part: feature:1510690-1510803:1:exon
so has part: feature:1511761-1512392:1:exon

position:1493693:1
position: 1493693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493693-1493780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494843-1494960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496036-1496199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496534-1496699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497032-1497169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497445-1497582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497943-1498036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498308-1498438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498701-1498871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499116-1499258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1500094-1500319:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1500930-1501049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1501717-1501896:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1503139-1503822:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1505490-1505590:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1505766-1505868:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1506824-1506990:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1508047-1508192:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510390-1510493:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510690-1510803:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1511761-1512392:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X3
translation: MRCFATSLGYHVHGMPVPEAEGGGDAVPARGEGGGSVCGALVGVHAHRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNNPNIHHNNHQHPNEQNEENELRQEGPAEEQQIGAEALNEMEEVAQEEGVAAGQAQNELPAPSQAVVPMEVDEEQAGPSGIQPVVKAAPITIHDSDSEDEEENMGTSRACISNSIAQNYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSSSHGGQAKQFPSEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSSAPGSTATASSCSAASPSPDCAQPAQSHSAGSSPAAGEESRHCGCSPCKREGSSEREPEESSVCSRCSSRAAQHRTSGGCDGECPSTSGACRDGPDFALRTLPDCGAAGEPGDDRTSGSACGAGSQEQSTQPPSWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1493756..1493780,1494843..1494960,1496112..1496199,1496534..1496699,1497032..1497169,1497445..1497582,1497943..1498036,1498308..1498438,1498701..1498871,1499116..1499258,1500094..1500319,1500930..1501049,1501717..1501896,1503139..1503822,1505490..1505590,1505766..1505868,1506824..1506990,1508047..1508192,1510390..1510493,1510690..1510803,1511761..1511939)
location: region:1493756-1511939:1
so has part: feature:1493756-1493780:1:exon
so has part: feature:1494843-1494960:1:exon
so has part: feature:1496112-1496199:1:exon
so has part: feature:1496534-1496699:1:exon
so has part: feature:1497032-1497169:1:exon
so has part: feature:1497445-1497582:1:exon
so has part: feature:1497943-1498036:1:exon
so has part: feature:1498308-1498438:1:exon
so has part: feature:1498701-1498871:1:exon
so has part: feature:1499116-1499258:1:exon
so has part: feature:1500094-1500319:1:exon
so has part: feature:1500930-1501049:1:exon
so has part: feature:1501717-1501896:1:exon
so has part: feature:1503139-1503822:1:exon
so has part: feature:1505490-1505590:1:exon
so has part: feature:1505766-1505868:1:exon
so has part: feature:1506824-1506990:1:exon
so has part: feature:1508047-1508192:1:exon
so has part: feature:1510390-1510493:1:exon
so has part: feature:1510690-1510803:1:exon
so has part: feature:1511761-1511939:1:exon

XP_031980784.1
type: Protein
SIO_000068: ncbiprotein

position:1493756:1
position: 1493756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493756-1493780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494843-1494960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496112-1496199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1496534-1496699:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497032-1497169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497445-1497582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497943-1498036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498308-1498438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1498701-1498871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1499116-1499258:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1500094-1500319:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1500930-1501049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1501717-1501896:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1503139-1503822:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1505490-1505590:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1505766-1505868:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1506824-1506990:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1508047-1508192:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510390-1510493:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1510690-1510803:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1511761-1511939:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X2
translation: MCMECLSRKLKEAVTLYLRVVKVVDLCAGRWWEYMPTGFTDSSFLTLLRKMPDIEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNNPNIHHNNHQHPNEQNEENELRQEGPAEEQQIGAEALNEMEEVAQEEGVAAGQAQNELPAPSQAVVPMEVDEEQAGPSGIQPVVKAAPITIHDSDSEDEEENMGTSRACISNSIAQNYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSSSHGGQAKQFPSEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSSAPGSTATASSCSAASPSPDCAQPAQSHSAGSSPAAGEESRHCGCSPCKREGSSEREPEESSVCSRCSSRAAQHRTSGGCDGECPSTSGACRDGPDFALRTLPDCGAAGEPGDDRTSGSACGAGSQEQSTQPPSWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1494849..1494960,1496036..1496199,1496534..1496699,1497032..1497169,1497445..1497582,1497943..1498036,1498308..1498438,1498701..1498871,1499116..1499258,1500094..1500319,1500930..1501049,1501717..1501896,1503139..1503822,1505490..1505590,1505766..1505868,1506824..1506990,1508047..1508192,1510390..1510493,1510690..1510803,1511761..1511939)
location: region:1494849-1511939:1
so has part: feature:1494849-1494960:1:exon
so has part: feature:1496036-1496199:1:exon
so has part: feature:1496534-1496699:1:exon
so has part: feature:1497032-1497169:1:exon
so has part: feature:1497445-1497582:1:exon
so has part: feature:1497943-1498036:1:exon
so has part: feature:1498308-1498438:1:exon
so has part: feature:1498701-1498871:1:exon
so has part: feature:1499116-1499258:1:exon
so has part: feature:1500094-1500319:1:exon
so has part: feature:1500930-1501049:1:exon
so has part: feature:1501717-1501896:1:exon
so has part: feature:1503139-1503822:1:exon
so has part: feature:1505490-1505590:1:exon
so has part: feature:1505766-1505868:1:exon
so has part: feature:1506824-1506990:1:exon
so has part: feature:1508047-1508192:1:exon
so has part: feature:1510390-1510493:1:exon
so has part: feature:1510690-1510803:1:exon
so has part: feature:1511761-1511939:1:exon

XP_031980783.1
type: Protein
SIO_000068: ncbiprotein

position:1494849:1
position: 1494849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1494849-1494960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1496036-1496199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496534-1496699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1497032-1497169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497445-1497582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497943-1498036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1498308-1498438:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498701-1498871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499116-1499258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1500094-1500319:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1500930-1501049:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1501717-1501896:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1503139-1503822:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1505490-1505590:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1505766-1505868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1506824-1506990:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1508047-1508192:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1510390-1510493:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510690-1510803:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1511761-1511939:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X4
translation: MPVPEAEGGGDAVPARGEGGGSVCGALVGVHAHRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNNPNIHHNNHQHPNEQNEENELRQEGPAEEQQIGAEALNEMEEVAQEEGVAAGQAQNELPAPSQAVVPMEVDEEQAGPSGIQPVVKAAPITIHDSDSEDEEENMGTSRACISNSIAQNYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSSSHGGQAKQFPSEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSSAPGSTATASSCSAASPSPDCAQPAQSHSAGSSPAAGEESRHCGCSPCKREGSSEREPEESSVCSRCSSRAAQHRTSGGCDGECPSTSGACRDGPDFALRTLPDCGAAGEPGDDRTSGSACGAGSQEQSTQPPSWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRKGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(1494860..1494960,1496112..1496199,1496534..1496699,1497032..1497169,1497445..1497582,1497943..1498036,1498308..1498438,1498701..1498871,1499116..1499258,1500094..1500319,1500930..1501049,1501717..1501896,1503139..1503822,1505490..1505590,1505766..1505868,1506824..1506990,1508047..1508192,1510390..1510493,1510690..1510803,1511761..1511939)
location: region:1494860-1511939:1
so has part: feature:1494860-1494960:1:exon
so has part: feature:1496112-1496199:1:exon
so has part: feature:1496534-1496699:1:exon
so has part: feature:1497032-1497169:1:exon
so has part: feature:1497445-1497582:1:exon
so has part: feature:1497943-1498036:1:exon
so has part: feature:1498308-1498438:1:exon
so has part: feature:1498701-1498871:1:exon
so has part: feature:1499116-1499258:1:exon
so has part: feature:1500094-1500319:1:exon
so has part: feature:1500930-1501049:1:exon
so has part: feature:1501717-1501896:1:exon
so has part: feature:1503139-1503822:1:exon
so has part: feature:1505490-1505590:1:exon
so has part: feature:1505766-1505868:1:exon
so has part: feature:1506824-1506990:1:exon
so has part: feature:1508047-1508192:1:exon
so has part: feature:1510390-1510493:1:exon
so has part: feature:1510690-1510803:1:exon
so has part: feature:1511761-1511939:1:exon

XP_031980785.1
type: Protein
SIO_000068: ncbiprotein

position:1494860:1
position: 1494860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1494860-1494960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1496112-1496199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1496534-1496699:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1497032-1497169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1497445-1497582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497943-1498036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1498308-1498438:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498701-1498871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499116-1499258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1500094-1500319:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1500930-1501049:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1501717-1501896:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1503139-1503822:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1505490-1505590:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1505766-1505868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1506824-1506990:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1508047-1508192:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1510390-1510493:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1510690-1510803:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1511761-1511939:1:exon

HTR4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: HTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1516519..1586931)
location: region:1516519-1586931:-1
so has part: feature:1516519-1586931:-1:exon
subclass of: SO_0000010

116451605
type: Gene
SIO_000068: ncbigene

position:1516519:-1
position: 1516519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586931:-1
position: 1586931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1516519-1586931:-1:exon

HTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: HTR4
product: 5-hydroxytryptamine receptor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032125233.1
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(1516519..1519180,1541483..1542093,1542759..1542912,1550901..1551101,1551994..1552119,1565001..1565082,1586728..1586931))
location: region:1516519-1586931:-1
so has part: feature:1586728-1586931:-1:exon
so has part: feature:1565001-1565082:-1:exon
so has part: feature:1551994-1552119:-1:exon
so has part: feature:1550901-1551101:-1:exon
so has part: feature:1542759-1542912:-1:exon
so has part: feature:1541483-1542093:-1:exon
so has part: feature:1516519-1519180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1586728-1586931:-1:exon

position:1586728:-1
position: 1586728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1565001-1565082:-1:exon

position:1565001:-1
position: 1565001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565082:-1
position: 1565082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1551994-1552119:-1:exon

position:1551994:-1
position: 1551994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1552119:-1
position: 1552119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1550901-1551101:-1:exon

position:1550901:-1
position: 1550901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551101:-1
position: 1551101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1542759-1542912:-1:exon

position:1542759:-1
position: 1542759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542912:-1
position: 1542912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1541483-1542093:-1:exon

position:1541483:-1
position: 1541483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542093:-1
position: 1542093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1516519-1519180:-1:exon

position:1519180:-1
position: 1519180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: HTR4
product: 5-hydroxytryptamine receptor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_032125234.1
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(1516519..1519180,1541483..1542093,1542759..1542912,1550901..1551101,1551994..1552119,1565001..1565082,1574164..1574304,1586728..1586931))
location: region:1516519-1586931:-1
so has part: feature:1586728-1586931:-1:exon
so has part: feature:1574164-1574304:-1:exon
so has part: feature:1565001-1565082:-1:exon
so has part: feature:1551994-1552119:-1:exon
so has part: feature:1550901-1551101:-1:exon
so has part: feature:1542759-1542912:-1:exon
so has part: feature:1541483-1542093:-1:exon
so has part: feature:1516519-1519180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1586728-1586931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1574164-1574304:-1:exon

position:1574164:-1
position: 1574164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574304:-1
position: 1574304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1565001-1565082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1551994-1552119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1550901-1551101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1542759-1542912:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1541483-1542093:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1516519-1519180:-1:exon

HTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: HTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 4
translation: MEELDVNVSSSEGFGIAEKIVLLSFISAVILMAILGNLLVMVAVCRDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDNWIYGEMFCLVRTSLDVLLTTASILHLCCISLDRYYAICCQPLVYRNKMTPLRIAVMLGGCWVIPTFISFLPIMQGWNSIGIIDLIQQRQFNKASNSTYCIFMVNKPYAITCSVVAFYIPFLLMVLAYHRIYVTARAHARQIRLLQRAGNPAEPRQQPQEPRQQPQEPRQHPPDQHSTHRMKTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFINYTVPGKLWTAFLWLGYINSGLNPFLYAFLNKAFRRAFLIILCCGDERYRRPSILGQTVPCSTTTINGSTHVLRYTVLHNGHHQEQEKLPIHTDPESQESCF
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(1519093..1519180,1541483..1542093,1542759..1542912,1550901..1551101,1551994..1552119,1565001..1565026))
location: region:1519093-1565026:-1
so has part: feature:1565001-1565026:-1:exon
so has part: feature:1551994-1552119:-1:exon
so has part: feature:1550901-1551101:-1:exon
so has part: feature:1542759-1542912:-1:exon
so has part: feature:1541483-1542093:-1:exon
so has part: feature:1519093-1519180:-1:exon

XP_031981124.1
type: Protein
SIO_000068: ncbiprotein

position:1519093:-1
position: 1519093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565026:-1
position: 1565026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565001-1565026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1551994-1552119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1550901-1551101:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542759-1542912:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541483-1542093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1519093-1519180:-1:exon

HTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: HTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 4
translation: MEELDVNVSSSEGFGIAEKIVLLSFISAVILMAILGNLLVMVAVCRDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDNWIYGEMFCLVRTSLDVLLTTASILHLCCISLDRYYAICCQPLVYRNKMTPLRIAVMLGGCWVIPTFISFLPIMQGWNSIGIIDLIQQRQFNKASNSTYCIFMVNKPYAITCSVVAFYIPFLLMVLAYHRIYVTARAHARQIRLLQRAGNPAEPRQQPQEPRQQPQEPRQHPPDQHSTHRMKTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFINYTVPGKLWTAFLWLGYINSGLNPFLYAFLNKAFRRAFLIILCCGDERYRRPSILGQTVPCSTTTINGSTHVLRYTVLHNGHHQEQEKLPIHTDPESQESCF
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(1519093..1519180,1541483..1542093,1542759..1542912,1550901..1551101,1551994..1552119,1565001..1565026))
location: region:1519093-1565026:-1
so has part: feature:1565001-1565026:-1:exon
so has part: feature:1551994-1552119:-1:exon
so has part: feature:1550901-1551101:-1:exon
so has part: feature:1542759-1542912:-1:exon
so has part: feature:1541483-1542093:-1:exon
so has part: feature:1519093-1519180:-1:exon

XP_031981125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1565001-1565026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1551994-1552119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1550901-1551101:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1542759-1542912:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541483-1542093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1519093-1519180:-1:exon

HTR4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: HTR4
product: 5-hydroxytryptamine receptor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004243251.1
SIO_010081: HTR4
so part of: HTR4
location: complement(join(1519094..1519180,1519857..1520034,1541483..1542093,1542759..1542912,1550901..1551101,1551994..1552119,1565001..1565082,1586728..1586931))
location: region:1519094-1586931:-1
so has part: feature:1586728-1586931:-1:exon
so has part: feature:1565001-1565082:-1:exon
so has part: feature:1551994-1552119:-1:exon
so has part: feature:1550901-1551101:-1:exon
so has part: feature:1542759-1542912:-1:exon
so has part: feature:1541483-1542093:-1:exon
so has part: feature:1519857-1520034:-1:exon
so has part: feature:1519094-1519180:-1:exon

position:1519094:-1
position: 1519094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586728-1586931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1565001-1565082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1551994-1552119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1550901-1551101:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1542759-1542912:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1541483-1542093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1519857-1520034:-1:exon

position:1519857:-1
position: 1519857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520034:-1
position: 1520034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1519094-1519180:-1:exon

LOC116451568
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1597521..1600208)
location: region:1597521-1600208:-1
so has part: feature:1597521-1600208:-1:exon
subclass of: SO_0000010

116451568
type: Gene
SIO_000068: ncbigene

position:1597521:-1
position: 1597521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600208:-1
position: 1600208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1597521-1600208:-1:exon

LOC116451568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116451568
product: sulfate transporter-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032125169.1
SIO_010081: LOC116451568
subclass of: SO_0000673
so part of: LOC116451568
location: complement(join(1597521..1599142,1599585..1600208))
location: region:1597521-1600208:-1
so has part: feature:1599585-1600208:-1:exon
so has part: feature:1597521-1599142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1599585-1600208:-1:exon

position:1599585:-1
position: 1599585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1597521-1599142:-1:exon

position:1599142:-1
position: 1599142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116451568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfate transporter-like
translation: MEDASSQEPALSKDTPGSFQPQEPPATFVTLEEYEPRGFSAKEFIVEKARAACTCSPQSLSTALRRLFPVLDWLPRYNLRAQLLGDIISGLLVGIVAIPQSISYSLLANQDPIYGIYTNFFCNIIYAAMATSRHACVGSFGVLCLMVGQSVTRHLQLAGYGDSSAALGGNSSSPGNGTEACDRSCYAITVALSLSYLVGLYQILLGVLQLGFVAVYLSEPLLGGFVTGSSLTIITSQMKYLLGLKIPRHEGVGSFILTWVDLFRYIHNTNICDLLTSLVALAIIVPVKELNERYKERMKAPFPIELLVVIVATLISHYFDFEQRYKAAVCGDIPTGFRKPTVPDISLFPSLAMDALPIAVIGFAMTVSLAEIFGKKHGYAVSANQEMIAIGMCNLIPSFFYCFASSAALTKTLLKESTGSQTQVSGLVTSLVLLLVLLWISPLFYSLQTSILGVVTIVNLRGGLRKFRDTPRMWQLSKLDTVVWWTTMLCSTLVTTEIGLLVGVCFALLCIIFRTQRPRATLLGKVSNREIYEDQATYKQLSSIANVKIFRFESSLYYANKDYFKAVLYQKTGVNPVLLRAQAHTDTGSSKGFWGTGFGCLKQAGRRAEQPPADSCPPSTEMHTLILDCGAMQFIDTVGLSVLKETHHDYKQVGVQVLLANCNPSIRQRLREGGWAGEAGSAGGQLPFHSIHDAVQFAERWHQGESEDKQDGAPDPADLNFQVSL
SIO_010081: LOC116451568
subclass of: SO_0000673
so part of: LOC116451568
location: complement(join(1597571..1599142,1599585..1600190))
location: region:1597571-1600190:-1
so has part: feature:1599585-1600190:-1:exon
so has part: feature:1597571-1599142:-1:exon

XP_031981060.1
type: Protein
SIO_000068: ncbiprotein

position:1597571:-1
position: 1597571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600190:-1
position: 1600190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1599585-1600190:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1597571-1599142:-1:exon

SLC26A2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SLC26A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1609464..1627670)
location: region:1609464-1627670:-1
so has part: feature:1609464-1627670:-1:exon
subclass of: SO_0000010

116451276
type: Gene
SIO_000068: ncbigene

position:1609464:-1
position: 1609464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1627670:-1
position: 1627670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609464-1627670:-1:exon

SLC26A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SLC26A2
product: solute carrier family 26 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_032124506.1
SIO_010081: SLC26A2
subclass of: SO_0000673
so part of: SLC26A2
location: complement(join(1609464..1617513,1619257..1619901,1625155..1627670))
location: region:1609464-1627670:-1
so has part: feature:1625155-1627670:-1:exon
so has part: feature:1619257-1619901:-1:exon
so has part: feature:1609464-1617513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1625155-1627670:-1:exon

position:1625155:-1
position: 1625155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1619257-1619901:-1:exon

position:1619257:-1
position: 1619257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1619901:-1
position: 1619901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1609464-1617513:-1:exon

position:1617513:-1
position: 1617513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC26A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SLC26A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfate transporter
translation: MAVMTETSNIHAVTGGPEGDDAKCGFRHRMFLEPQEEKKSMKALLLKQAKKTCSCTPAKIKDCVLGFFPILQWLPKYKLGEYLLGDIMSGVIVGVLLVPQSIAYSLLAGLEPIYGLYTSFFACIIYCIFGTSRHISVGIFGVVCLMVGQVVDREVERAGYDLEPAVLSALPGPGGDGNSTGNGTAPRPLCDKSCYAMAVAATMTFISGVYQVAMGLFQVGFVSVYLSDSLLSGFVTGASFTVLTSQVKYLLGLDIPRSGGVGSFITTWINIFRNIHRTNICDLITSSLCFLVLIPTKELNERFKSKLKAPIPVELFVVVAATLASHFGKLGETYGSSVSGHIPTGFLPPRPPDWALIPNVALDAIPIAIIGFAITVSLSEMFAKKHGYSVRANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCRTQVSGIVTSLVILLVLLVIAPLFYSLQKCVLAVITIINLRGALRKFRDLPKMWHLSRVDTVIWGVTMAATALISTEIGLLVGVCFSMLCVIFRTQRPEAPLLGWVAESETYESLSAYKNLQTKPGVVVFRFEAPLYYINKECFKSTLYKQTGVNPVGVKAAEKKAAKRMLREKEAGSGDNQSSVPVDFGLGPVGFHTIVIDCCAVQFLDTAGIRMLKEVCKDYEDIGVQVLLAQCNPSVRSSLLRGEFFKEGEDHLLFHSVHQAVDFALGTQGHGASKN
SIO_010081: SLC26A2
subclass of: SO_0000673
so part of: SLC26A2
location: complement(join(1616017..1617513,1619257..1619889))
location: region:1616017-1619889:-1
so has part: feature:1619257-1619889:-1:exon
so has part: feature:1616017-1617513:-1:exon

XP_031980397.1
type: Protein
SIO_000068: ncbiprotein

position:1616017:-1
position: 1616017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1619889:-1
position: 1619889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1619257-1619889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1616017-1617513:-1:exon

LOC116451278
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451278
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1627682..1630781)
location: region:1627682-1630781:-1
so has part: feature:1627682-1630781:-1:exon
subclass of: SO_0000010

116451278
type: Gene
SIO_000068: ncbigene

position:1627682:-1
position: 1627682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1630781:-1
position: 1630781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1627682-1630781:-1:exon

LOC116451278
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116451278
product: E3 ubiquitin/ISG15 ligase TRIM25-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 129 samples with support for all annotated introns
transcript id: XM_032124508.1
SIO_010081: LOC116451278
subclass of: SO_0000673
so part of: LOC116451278
location: complement(join(1627682..1627777,1627915..1628148,1628699..1628794,1630062..1630781))
location: region:1627682-1630781:-1
so has part: feature:1630062-1630781:-1:exon
so has part: feature:1628699-1628794:-1:exon
so has part: feature:1627915-1628148:-1:exon
so has part: feature:1627682-1627777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1630062-1630781:-1:exon

position:1630062:-1
position: 1630062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1628699-1628794:-1:exon

position:1628699:-1
position: 1628699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1628794:-1
position: 1628794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1627915-1628148:-1:exon

position:1627915:-1
position: 1627915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1628148:-1
position: 1628148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1627682-1627777:-1:exon

position:1627777:-1
position: 1627777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451278
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116451278
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like
translation: MAKAWEGCGGAGSLEAELTCPICLGLYRDPVSLNCGHSFCRQCIKNMLGAQQHSQGPYTCPMCRVHLGPTVELQNNFQLGNIVEAFQASASKRQEDEGSEKGKTRVVPCEYCLDGFQEAVKTCVVCNVSLCQAHLSKHNAKASQQEHILVEVGAGEAEERRCPEHGKLLECYCQEEEKCICVLCSIAGAHKGHEVITMKEERDKQLVKLPDTMTELQDSKSDLDTALEELQKCENQVKTNTKAVTSQLEVQLKDMRTQLVQKEKKILRCIKTIEENQLADIAKARKKMEQKRDQAEQNLQALQKIKEQPDIFLFLKELKLVTDRYVPLDTACFLL
SIO_010081: LOC116451278
subclass of: SO_0000673
so part of: LOC116451278
location: complement(join(1627718..1627777,1627915..1628148,1628699..1628794,1630062..1630679))
location: region:1627718-1630679:-1
so has part: feature:1630062-1630679:-1:exon
so has part: feature:1628699-1628794:-1:exon
so has part: feature:1627915-1628148:-1:exon
so has part: feature:1627718-1627777:-1:exon

XP_031980399.1
type: Protein
SIO_000068: ncbiprotein

position:1627718:-1
position: 1627718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1630679:-1
position: 1630679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1630062-1630679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1628699-1628794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1627915-1628148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1627718-1627777:-1:exon

LOC116451277
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1631053..1637178)
location: region:1631053-1637178:-1
so has part: feature:1631053-1637178:-1:exon
subclass of: SO_0000010

116451277
type: Gene
SIO_000068: ncbigene

position:1631053:-1
position: 1631053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1637178:-1
position: 1637178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1631053-1637178:-1:exon

LOC116451277
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116451277
product: tripartite motif-containing protein 29-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 116 samples with support for all annotated introns
transcript id: XM_032124507.1
SIO_010081: LOC116451277
subclass of: SO_0000673
so part of: LOC116451277
location: complement(join(1631053..1632158,1632769..1633010,1633936..1633958,1634053..1634286,1634650..1634745,1635965..1637178))
location: region:1631053-1637178:-1
so has part: feature:1635965-1637178:-1:exon
so has part: feature:1634650-1634745:-1:exon
so has part: feature:1634053-1634286:-1:exon
so has part: feature:1633936-1633958:-1:exon
so has part: feature:1632769-1633010:-1:exon
so has part: feature:1631053-1632158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1635965-1637178:-1:exon

position:1635965:-1
position: 1635965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1634650-1634745:-1:exon

position:1634650:-1
position: 1634650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1634745:-1
position: 1634745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1634053-1634286:-1:exon

position:1634053:-1
position: 1634053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1634286:-1
position: 1634286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1633936-1633958:-1:exon

position:1633936:-1
position: 1633936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1633958:-1
position: 1633958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1632769-1633010:-1:exon

position:1632769:-1
position: 1632769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1633010:-1
position: 1633010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1631053-1632158:-1:exon

position:1632158:-1
position: 1632158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451277
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116451277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 29-like
translation: MAGAEAGAEAVAGLREELTCPICLDIYRDPASLGCSHSFCTECIRQALRCQQSAARCPLCHSPAGELQPNFHLRNIVQKFMDVPAHRQEEKREAQCKGKGESSGQPEEVILCDSCLQEPQPAVKTCLSCEASLCQAHLSKHNAKKAQKSHVLVEPCGAQVLAERRCPKHGKLLECFCETDWNCICILCSVLSHKNHRIISLEEAFDQAQISSPGTLEALRNHEAALDNVIANLLKQKEGLKTEESLRRGRLESLLMEMHLQLEKKKGEVLKVLREYEEQQLSRIQAEMNNHKREKDLASHDVRQLEALRNQKDILLFTKAFATIKARQRKPLPGIDGLMVPKPPISLDKSTTTGILKLFQQFLLNVEFSFKPPLPPLGYSFNKPPPPPSPPSTPPPPAPTPMLTASSGFHYNNTQYHGPAFAFGSSPWLSFK
SIO_010081: LOC116451277
subclass of: SO_0000673
so part of: LOC116451277
location: complement(join(1632082..1632158,1632769..1633010,1633936..1633958,1634053..1634286,1634650..1634745,1635965..1636591))
location: region:1632082-1636591:-1
so has part: feature:1635965-1636591:-1:exon
so has part: feature:1634650-1634745:-1:exon
so has part: feature:1634053-1634286:-1:exon
so has part: feature:1633936-1633958:-1:exon
so has part: feature:1632769-1633010:-1:exon
so has part: feature:1632082-1632158:-1:exon

XP_031980398.1
type: Protein
SIO_000068: ncbiprotein

position:1632082:-1
position: 1632082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1636591:-1
position: 1636591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1635965-1636591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1634650-1634745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1634053-1634286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1633936-1633958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1632769-1633010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1632082-1632158:-1:exon

PPARGC1B
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PPARGC1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1638144..1687322)
location: region:1638144-1687322:-1
so has part: feature:1638144-1687322:-1:exon
subclass of: SO_0000010

116451275
type: Gene
SIO_000068: ncbigene

position:1638144:-1
position: 1638144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687322:-1
position: 1687322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1638144-1687322:-1:exon

PPARGC1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PPARGC1B
product: PPARG coactivator 1 beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_032124505.1
SIO_010081: PPARGC1B
subclass of: SO_0000673
so part of: PPARGC1B
location: complement(join(1638144..1644108,1645685..1645839,1646113..1646234,1646969..1647044,1647518..1648286,1648699..1648763,1649130..1649166,1649661..1650750,1651449..1651559,1653370..1653582,1655825..1655998,1687167..1687322))
location: region:1638144-1687322:-1
so has part: feature:1687167-1687322:-1:exon
so has part: feature:1655825-1655998:-1:exon
so has part: feature:1653370-1653582:-1:exon
so has part: feature:1651449-1651559:-1:exon
so has part: feature:1649661-1650750:-1:exon
so has part: feature:1649130-1649166:-1:exon
so has part: feature:1648699-1648763:-1:exon
so has part: feature:1647518-1648286:-1:exon
so has part: feature:1646969-1647044:-1:exon
so has part: feature:1646113-1646234:-1:exon
so has part: feature:1645685-1645839:-1:exon
so has part: feature:1638144-1644108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1687167-1687322:-1:exon

position:1687167:-1
position: 1687167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1655825-1655998:-1:exon

position:1655825:-1
position: 1655825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655998:-1
position: 1655998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1653370-1653582:-1:exon

position:1653370:-1
position: 1653370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1653582:-1
position: 1653582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1651449-1651559:-1:exon

position:1651449:-1
position: 1651449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1651559:-1
position: 1651559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1649661-1650750:-1:exon

position:1649661:-1
position: 1649661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1650750:-1
position: 1650750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1649130-1649166:-1:exon

position:1649130:-1
position: 1649130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1649166:-1
position: 1649166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1648699-1648763:-1:exon

position:1648699:-1
position: 1648699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648763:-1
position: 1648763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1647518-1648286:-1:exon

position:1647518:-1
position: 1647518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648286:-1
position: 1648286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1646969-1647044:-1:exon

position:1646969:-1
position: 1646969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1647044:-1
position: 1647044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1646113-1646234:-1:exon

position:1646113:-1
position: 1646113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1646234:-1
position: 1646234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1645685-1645839:-1:exon

position:1645685:-1
position: 1645685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1645839:-1
position: 1645839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1638144-1644108:-1:exon

position:1644108:-1
position: 1644108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPARGC1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PPARGC1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome proliferator-activated receptor gamma coactivator 1-beta
translation: MAEPGPDCSSLLDEDLSSFVFSYLADSQYEVSGEEHLYSDFPEIDLSQLDAGDLDSAGCFSELQWGGEHSETDSSQYSTDDSELFQIIDSENEALLAALTETLDDIQGDDMGLAAFRTMEEGDTLNPATTSPAPSPKPTAPVTGGPPPAPECDELSLLKKLLLSPSPLSCEAQRDGSARRPGTPKCRPARPCTKVEGPRDRRASVPQAQSRSCTELHRHLTSSTSCSQTKAPQAPEECPSSGHHLSPADCTHHEDDSDSSEDSLSSGDSVAALSSAEDGTGSQFSCEGELHSVVELIRYMHTYCLPPRKLPARDPADTKPQPCSSPFKRAKPDCAPAPGSAQSRPGCAWQAAGGCKKPGASFSILKELLARDLLCDVSKPYRLGKPVYAALARPPGSCSPVPPEGDDASGTCTPRAKAAAEKGEPRQSPGAEAEAPRELGGLEVDAGKQEGSPGAGKAARKQDSAVYAVRRSKRLNPELGHWLSFLDEPPPESSVPLGCREPAPCPVLEGFSAEEPAAEVEVGGTAPSAEPQPLCLGSLGDGEVGTESRRCALLEQTETPGCLTLSLAQTDPTFGKRNFEPMLTVELCGTAGLTPPTTPPYKPAEEDLYKPDIPQEPGKEDGMAPSPGGAGDAAASRKAPRKHLERTELFAHLSRAGGRPLPEQQGLLKRPFSRSFGDHDYCQVLKPEAALQRKVLKSWEPPSQVETEHKRRVPAAHYQGLELGKDTGTEMLWKDGVKQLRDQEIRASLTKHFGFLDSALDDEDMVFCKTPEYDTVFEDSCSESGSPVEEEDEEEEEEEEEEEHGNTKLCLRRNPLSRTSLHYCSRSRSSSGSSCCRSRSPASRRTFRCENGEQCQGGSGHRGQLEKRREKAIGEGRVVYIRNLSSSMSSSELKKRFEVFGEIVECQVLSRTNRGEKYGFITYRYSEHAALSLKNGPSLRKRNEPSFQLSSGGLGRFFWTRYADLDCSTDESSPAPVKSKYETMDFDSLLQEAQLSLHR
SIO_010081: PPARGC1B
subclass of: SO_0000673
so part of: PPARGC1B
location: complement(join(1644005..1644108,1645685..1645839,1646113..1646234,1646969..1647044,1647518..1648286,1648699..1648763,1649130..1649166,1649661..1650750,1651449..1651559,1653370..1653582,1655825..1655998,1687167..1687250))
location: region:1644005-1687250:-1
so has part: feature:1687167-1687250:-1:exon
so has part: feature:1655825-1655998:-1:exon
so has part: feature:1653370-1653582:-1:exon
so has part: feature:1651449-1651559:-1:exon
so has part: feature:1649661-1650750:-1:exon
so has part: feature:1649130-1649166:-1:exon
so has part: feature:1648699-1648763:-1:exon
so has part: feature:1647518-1648286:-1:exon
so has part: feature:1646969-1647044:-1:exon
so has part: feature:1646113-1646234:-1:exon
so has part: feature:1645685-1645839:-1:exon
so has part: feature:1644005-1644108:-1:exon

XP_031980396.1
type: Protein
SIO_000068: ncbiprotein

position:1644005:-1
position: 1644005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687250:-1
position: 1687250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1687167-1687250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1655825-1655998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1653370-1653582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1651449-1651559:-1:exon