Corvus moneduloides isolate bCorMon1 chromosome 14, bCorMon1.pri, whole genome shotgun sequence.
type: Entry
definition: Corvus moneduloides isolate bCorMon1 chromosome 14, bCorMon1.pri, whole genome shotgun sequence.
sequence version: NC_045489.1
sequence date: 2020-01-23
sequence: sequence
division: CON
label: NC_045489.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA599199
dblink: SAMN12368441
keyword: WGS
keyword: RefSeq
source: Corvus moneduloides (New Caledonian crow)
organism: Corvus moneduloides
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM018820.1.\nAssembly name: bCorMon1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/11/14. The original whole-genome shotgun project has the\naccession WHPO00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2019\nAssembly Method :: FALCON v. 2018.31.08-03.06; FALCON-Unzip\n + Arrow v. 6.0.0.47841; purge_dups v.\n github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Bionano solve v. 3.2.1_04122018; Salsa\n HiC v. 2.2; Arrow polishing + gap filling\n v. SMRTlink_6.0.0.47841; longranger\n alignment v. 2.2.2; freebayes polishing\n v. 1.3.1; gEVAL manual curation v. 26 SEP\n 2019; VGP assembly pipeline v. 1.6\nAssembly Name :: bCorMon1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.08x\nSequencing Technology :: PacBio Sequel I; Illumina NovaSeq; Arima\n Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Corvus moneduloides Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 20680512
topology: linear
so has quality: SO_0000987
location: 1..20680512
location: region:1-20680512:1
RO_0002162: 1196302

NC_045489
type: RefSeq
SIO_000068: refseq

PRJNA599199
type: BioProject
SIO_000068: bioproject

SAMN12368441
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20680512:1
position: 20680512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-20680512:1:source
so part of: sequence
organism: Corvus moneduloides
mol type: genomic DNA
isolate: bCorMon1
chromosome: 14
sex: female
tissue type: blood
country: New Caledonia: near Bourail
lat lon: 21.599296 S 165.398128 E
collection date: 17-Oct-2018
collected by: Matthew Steele

1196302
type: Taxonomy
SIO_000068: taxonomy

ADGRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5811..21956
location: region:5811-21956:1
so has part: feature:5811-21956:1:exon
subclass of: SO_0000010

116451171
type: Gene
SIO_000068: ncbigene

position:5811:1
position: 5811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21956:1
position: 21956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5811-21956:1:exon

ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ADGRG4
product: adhesion G protein-coupled receptor G4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032124330.1
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(5811..5941,6390..6484,6880..6932,7630..7669,7991..8016,9142..9290,10213..10345,10848..10966,12001..12211,13326..13491,13613..13762,14563..14685,16415..16460,17615..17718,19494..19615,20204..21956)
location: region:5811-21956:1
so has part: feature:5811-5941:1:exon
so has part: feature:6390-6484:1:exon
so has part: feature:6880-6932:1:exon
so has part: feature:7630-7669:1:exon
so has part: feature:7991-8016:1:exon
so has part: feature:9142-9290:1:exon
so has part: feature:10213-10345:1:exon
so has part: feature:10848-10966:1:exon
so has part: feature:12001-12211:1:exon
so has part: feature:13326-13491:1:exon
so has part: feature:13613-13762:1:exon
so has part: feature:14563-14685:1:exon
so has part: feature:16415-16460:1:exon
so has part: feature:17615-17718:1:exon
so has part: feature:19494-19615:1:exon
so has part: feature:20204-21956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5811-5941:1:exon

position:5941:1
position: 5941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6390-6484:1:exon

position:6390:1
position: 6390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6484:1
position: 6484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6880-6932:1:exon

position:6880:1
position: 6880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6932:1
position: 6932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7630-7669:1:exon

position:7630:1
position: 7630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7669:1
position: 7669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7991-8016:1:exon

position:7991:1
position: 7991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8016:1
position: 8016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9142-9290:1:exon

position:9142:1
position: 9142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9290:1
position: 9290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10213-10345:1:exon

position:10213:1
position: 10213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10345:1
position: 10345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10848-10966:1:exon

position:10848:1
position: 10848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10966:1
position: 10966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12001-12211:1:exon

position:12001:1
position: 12001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12211:1
position: 12211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:13326-13491:1:exon

position:13326:1
position: 13326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13491:1
position: 13491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:13613-13762:1:exon

position:13613:1
position: 13613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13762:1
position: 13762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14563-14685:1:exon

position:14563:1
position: 14563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14685:1
position: 14685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:16415-16460:1:exon

position:16415:1
position: 16415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16460:1
position: 16460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:17615-17718:1:exon

position:17615:1
position: 17615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17718:1
position: 17718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:19494-19615:1:exon

position:19494:1
position: 19494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19615:1
position: 19615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:20204-21956:1:exon

position:20204:1
position: 20204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4
translation: MNFSLLYKMERAPDCYDARRLLEHWFNIMFTGEGFVVTNFKVRDNYPHHSAYKRTHGKVKQMSQSYVCKAIVKTTFLETQEVLSLKIKELLNDSYKEGPFSLYVKPEDVAVKSIALMGCPESFSHTRYKGNYSWPLTSPASKTEVSCRKNPLQSAQRSCEISIELEQAFWKKPNMTKCKLLEKLPNNILGLQNIKITEENAQDVVQHILYLLPDATLHVEELEIIASKISDIVELADVSVTLAETVLSILDYTVLQEIEDENFRKITNSILKMAEEMGYKVTYTDRNMSVITTSLALLVLRPDPGLFGGLAFGITSYNRSVDLKISVQENPFKKALASVFLPKSLKNFLGIEYSDPDKHSKIQFKFFGTTSLFVDDSLTMERLNTYVVSASIENASIQNLNEPVTVTLHHIDQNRGNAAVHCVFWDFGKNNGLGGWNTSGCEMEYTDMNYTICFCNHLTHFGVLLDLARTEIDVTHDHILTLISYAGCGASSLFLGITLMAYLTLERVRRDNPSKILLNLCAALLMLNMVFLTNSWLTSFNQPGLCIIMAMLLHYFLLAAFTWMSLESVHFYLALVKVFNVYVPKYILKCCIAGWGK
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(6410..6484,6880..6932,7630..7669,7991..8016,9142..9290,10213..10345,10848..10966,12001..12211,13326..13491,13613..13762,14563..14685,16415..16460,17615..17718,19494..19615,20204..20480)
location: region:6410-20480:1
so has part: feature:6410-6484:1:exon
so has part: feature:6880-6932:1:exon
so has part: feature:7630-7669:1:exon
so has part: feature:7991-8016:1:exon
so has part: feature:9142-9290:1:exon
so has part: feature:10213-10345:1:exon
so has part: feature:10848-10966:1:exon
so has part: feature:12001-12211:1:exon
so has part: feature:13326-13491:1:exon
so has part: feature:13613-13762:1:exon
so has part: feature:14563-14685:1:exon
so has part: feature:16415-16460:1:exon
so has part: feature:17615-17718:1:exon
so has part: feature:19494-19615:1:exon
so has part: feature:20204-20480:1:exon

XP_031980221.1
type: Protein
SIO_000068: ncbiprotein

position:6410:1
position: 6410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20480:1
position: 20480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6410-6484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6880-6932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7630-7669:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7991-8016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9142-9290:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10213-10345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10848-10966:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12001-12211:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:13326-13491:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:13613-13762:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14563-14685:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16415-16460:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17615-17718:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:19494-19615:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:20204-20480:1:exon

BRS3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 35000..42772
location: region:35000-42772:1
so has part: feature:35000-42772:1:exon
subclass of: SO_0000010

116450831
type: Gene
SIO_000068: ncbigene

position:35000:1
position: 35000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42772:1
position: 42772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35000-42772:1:exon

BRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: BRS3
product: bombesin receptor subtype 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032123690.1
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(35000..35651,38346..38697,39431..42772)
location: region:35000-42772:1
so has part: feature:35000-35651:1:exon
so has part: feature:38346-38697:1:exon
so has part: feature:39431-42772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35000-35651:1:exon

position:35651:1
position: 35651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38346-38697:1:exon

position:38346:1
position: 38346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38697:1
position: 38697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39431-42772:1:exon

position:39431:1
position: 39431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: BRS3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: bombesin receptor subtype-3
translation: MSQLYLQSANQTLCASTDDTELKSSSDNETTNEKWTEDSFPGLKILCIXYVTYAVIISVGLLGNAILIKVFFKIKSMQTVPNIFITSLAFGDLLXLLTCVPIDATRYIVDTWLFGRIGCKLLSFIQLTSVGVSVFTLTVLSADRYRAIVKPLELQTSDALLKTCCKAGCVWIVSMIFAIPEAVFSDLYSFRNPEKNVTFEACAPYPVSEKILQEAHSLVCFLVFYIVPLAVISVYYFLIARTLYKSTSNMPAEEHGHAHKQIESRKRVAKTVLVLVALFALCWLPNHILYLYRSFTYHTSVDASTFHLIATIFSRALAFSNSCVNPFALYWLSKSFRQHFKKQVSCCKAAFCAKPPSAPQSRSPTRALSVTGSMHGSEISVTLLTDYSITKEEESV
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(35223..35651,38346..38697,39431..39841)
location: region:35223-39841:1
so has part: feature:35223-35651:1:exon
so has part: feature:38346-38697:1:exon
so has part: feature:39431-39841:1:exon

XP_031979581.1
type: Protein
SIO_000068: ncbiprotein

position:35223:1
position: 35223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39841:1
position: 39841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35223-35651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38346-38697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39431-39841:1:exon

HTATSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: HTATSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 45878..69805
location: region:45878-69805:1
so has part: feature:45878-69805:1:exon
subclass of: SO_0000010

116450832
type: Gene
SIO_000068: ncbigene

position:45878:1
position: 45878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69805:1
position: 69805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45878-69805:1:exon

HTATSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: HTATSF1
product: HIV-1 Tat specific factor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032123691.1
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(45878..46203,49775..49980,50290..50323,51444..51624,52647..52809,54516..54615,55147..55236,55720..55857,56217..62323,64874..65375,65529..65761,66358..66776,68851..69805)
location: region:45878-69805:1
so has part: feature:45878-46203:1:exon
so has part: feature:49775-49980:1:exon
so has part: feature:50290-50323:1:exon
so has part: feature:51444-51624:1:exon
so has part: feature:52647-52809:1:exon
so has part: feature:54516-54615:1:exon
so has part: feature:55147-55236:1:exon
so has part: feature:55720-55857:1:exon
so has part: feature:56217-62323:1:exon
so has part: feature:64874-65375:1:exon
so has part: feature:65529-65761:1:exon
so has part: feature:66358-66776:1:exon
so has part: feature:68851-69805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45878-46203:1:exon

position:46203:1
position: 46203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49775-49980:1:exon

position:49775:1
position: 49775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49980:1
position: 49980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50290-50323:1:exon

position:50290:1
position: 50290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50323:1
position: 50323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51444-51624:1:exon

position:51444:1
position: 51444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51624:1
position: 51624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:52647-52809:1:exon

position:52647:1
position: 52647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52809:1
position: 52809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:54516-54615:1:exon

position:54516:1
position: 54516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54615:1
position: 54615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:55147-55236:1:exon

position:55147:1
position: 55147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55236:1
position: 55236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:55720-55857:1:exon

position:55720:1
position: 55720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55857:1
position: 55857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:56217-62323:1:exon

position:56217:1
position: 56217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62323:1
position: 62323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:64874-65375:1:exon

position:64874:1
position: 64874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65375:1
position: 65375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:65529-65761:1:exon

position:65529:1
position: 65529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65761:1
position: 65761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:66358-66776:1:exon

position:66358:1
position: 66358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66776:1
position: 66776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:68851-69805:1:exon

position:68851:1
position: 68851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTATSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: HTATSF1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:51454..51456,aa:OTHER)
product: LOW QUALITY PROTEIN: HIV Tat-specific factor 1
translation: MSGKDGNEEFYRQLQLQQQYEAKPTEGEGEGESDPFTYVDPXDGAAYEWDLEKKAWFPKITEDFLATYHANYGFHADETDTSSASGTAVESKQPVSSKTSGTQPSANETGXKTTDPKQKSEKRKLEPGWFHVEEDRNTMPSVXIYFAGLPPDITKDEFVQVMSKCGIIMRDPQTEEHKIKLYKDKEGNLKGDGLCCYLKRESVQLALRLLDEAEIRGYKLHVEVAKFQLXGEYDASKKKKKCKDYKKKLSQQQKQLDWRPEKKDGATRMRHERIVIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLIFDRHPDGVASVSFKEATEADLCKLTLNGRWFGGRQLSAETWDGVTDYQVEETAREREERLKVWESFLGDPDAKEQQTTSDSDSASNDVKLPEGKQPPEVNDTPKEDANDEAHKRENSDEGVNEDGAPSTDSSLAGSDGEADT
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(46028..46203,49775..49980,50290..50323,51444..51624,52647..52809,54516..54615,55147..55236,55720..55857,56217..56501)
location: region:46028-56501:1
so has part: feature:46028-46203:1:exon
so has part: feature:49775-49980:1:exon
so has part: feature:50290-50323:1:exon
so has part: feature:51444-51624:1:exon
so has part: feature:52647-52809:1:exon
so has part: feature:54516-54615:1:exon
so has part: feature:55147-55236:1:exon
so has part: feature:55720-55857:1:exon
so has part: feature:56217-56501:1:exon

XP_031979582.1
type: Protein
SIO_000068: ncbiprotein

position:46028:1
position: 46028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56501:1
position: 56501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46028-46203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49775-49980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50290-50323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51444-51624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52647-52809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:54516-54615:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55147-55236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:55720-55857:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56217-56501:1:exon

CD40LG
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90132..96758
location: region:90132-96758:1
so has part: feature:90132-96758:1:exon
subclass of: SO_0000010

116451163
type: Gene
SIO_000068: ncbigene

position:90132:1
position: 90132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96758:1
position: 96758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90132-96758:1:exon

CD40LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CD40LG
product: CD40 ligand
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_032124327.1
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(90132..90442,92239..92376,93558..93600,93891..93947,94229..94291,96204..96758)
location: region:90132-96758:1
so has part: feature:90132-90442:1:exon
so has part: feature:92239-92376:1:exon
so has part: feature:93558-93600:1:exon
so has part: feature:93891-93947:1:exon
so has part: feature:94229-94291:1:exon
so has part: feature:96204-96758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90132-90442:1:exon

position:90442:1
position: 90442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92239-92376:1:exon

position:92239:1
position: 92239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92376:1
position: 92376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93558-93600:1:exon

position:93558:1
position: 93558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93600:1
position: 93600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93891-93947:1:exon

position:93891:1
position: 93891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93947:1
position: 93947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94229-94291:1:exon

position:94229:1
position: 94229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94291:1
position: 94291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:96204-96758:1:exon

position:96204:1
position: 96204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD40LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD40 ligand
translation: MNEPYGPEAPRPIGSPSPGIMKMFIGFLTVFIVVQTIGTVLFCLYLHMKMDKMEEVLSLNEDYIFLKKVQKCQTAEGQKSTLLDCEKILKGFQNIQCKDGALKEQPKFEMQRGPEHHEHSRLTHKNETSFAAEKREPIAVHLAGQQSNKAGSVLEWKETMYGPTNSLVSNKEGKLKVEEAGLYYIYSQVSFCTREVSLAPFTLYIYLHIPKEEDRLLLKGQKTQSTLKSSCELQSIRVGGVFNLREDDMVFVNVTDSTKVNYSHGNTYVGIFKL
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(90287..90442,92239..92376,93558..93600,93891..93947,94229..94291,96204..96571)
location: region:90287-96571:1
so has part: feature:90287-90442:1:exon
so has part: feature:92239-92376:1:exon
so has part: feature:93558-93600:1:exon
so has part: feature:93891-93947:1:exon
so has part: feature:94229-94291:1:exon
so has part: feature:96204-96571:1:exon

XP_031980218.1
type: Protein
SIO_000068: ncbiprotein

position:90287:1
position: 90287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96571:1
position: 96571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90287-90442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92239-92376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93558-93600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93891-93947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94229-94291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96204-96571:1:exon

ARHGEF6
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(100622..139669)
location: region:100622-139669:-1
so has part: feature:100622-139669:-1:exon
subclass of: SO_0000010

116450865
type: Gene
SIO_000068: ncbigene

position:100622:-1
position: 100622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139669:-1
position: 139669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100622-139669:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_032123760.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(100622..102939,103858..103912,104742..104841,105535..105624,106733..106826,107646..107666,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125343,125756..125883,130521..130605,138356..138439,139455..139669))
location: region:100622-139669:-1
so has part: feature:139455-139669:-1:exon
so has part: feature:138356-138439:-1:exon
so has part: feature:130521-130605:-1:exon
so has part: feature:125756-125883:-1:exon
so has part: feature:125142-125343:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:107646-107666:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:100622-102939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139455-139669:-1:exon

position:139455:-1
position: 139455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:138356-138439:-1:exon

position:138356:-1
position: 138356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138439:-1
position: 138439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130521-130605:-1:exon

position:130521:-1
position: 130521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130605:-1
position: 130605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:125756-125883:-1:exon

position:125756:-1
position: 125756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125883:-1
position: 125883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:125142-125343:-1:exon

position:125142:-1
position: 125142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125343:-1
position: 125343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:122512-122582:-1:exon

position:122512:-1
position: 122512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122582:-1
position: 122582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:121230-121324:-1:exon

position:121230:-1
position: 121230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121324:-1
position: 121324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:120484-120579:-1:exon

position:120484:-1
position: 120484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120579:-1
position: 120579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:119556-119678:-1:exon

position:119556:-1
position: 119556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119678:-1
position: 119678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:118115-118253:-1:exon

position:118115:-1
position: 118115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118253:-1
position: 118253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:116187-116246:-1:exon

position:116187:-1
position: 116187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116246:-1
position: 116246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:113925-114071:-1:exon

position:113925:-1
position: 113925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114071:-1
position: 114071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:112975-113061:-1:exon

position:112975:-1
position: 112975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113061:-1
position: 113061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:111910-111988:-1:exon

position:111910:-1
position: 111910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111988:-1
position: 111988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:110905-111038:-1:exon

position:110905:-1
position: 110905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111038:-1
position: 111038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:110498-110623:-1:exon

position:110498:-1
position: 110498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110623:-1
position: 110623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:107646-107666:-1:exon

position:107646:-1
position: 107646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107666:-1
position: 107666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:106733-106826:-1:exon

position:106733:-1
position: 106733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106826:-1
position: 106826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:105535-105624:-1:exon

position:105535:-1
position: 105535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105624:-1
position: 105624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:104742-104841:-1:exon

position:104742:-1
position: 104742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104841:-1
position: 104841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:103858-103912:-1:exon

position:103858:-1
position: 103858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103912:-1
position: 103912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:100622-102939:-1:exon

position:102939:-1
position: 102939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_032123761.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(100622..102939,103858..103912,104742..104841,105535..105624,106733..106826,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125343,125756..125883,130521..130605,138356..138439,139455..139668))
location: region:100622-139668:-1
so has part: feature:139455-139668:-1:exon
so has part: feature:138356-138439:-1:exon
so has part: feature:130521-130605:-1:exon
so has part: feature:125756-125883:-1:exon
so has part: feature:125142-125343:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:100622-102939:-1:exon

position:139668:-1
position: 139668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139455-139668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138356-138439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130521-130605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125756-125883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125142-125343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122512-122582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121230-121324:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118115-118253:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116187-116246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:113925-114071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:112975-113061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:100622-102939:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032123763.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(100622..102939,103858..103912,104742..104841,105535..105624,106733..106826,107646..107666,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125343,130521..130605,133558..133612))
location: region:100622-133612:-1
so has part: feature:133558-133612:-1:exon
so has part: feature:130521-130605:-1:exon
so has part: feature:125142-125343:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:107646-107666:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:100622-102939:-1:exon

position:133612:-1
position: 133612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133558-133612:-1:exon

position:133558:-1
position: 133558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:130521-130605:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:122512-122582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121230-121324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118115-118253:-1:exon

urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:113925-114071:-1:exon

urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107646-107666:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:100622-102939:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 101 samples with support for all annotated introns
transcript id: XM_032123764.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(100622..102939,103858..103912,104742..104841,105535..105624,106733..106826,107646..107666,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125343,125756..125883,130521..130605,133558..133612))
location: region:100622-133612:-1
so has part: feature:133558-133612:-1:exon
so has part: feature:130521-130605:-1:exon
so has part: feature:125756-125883:-1:exon
so has part: feature:125142-125343:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:107646-107666:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:100622-102939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133558-133612:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:130521-130605:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:125142-125343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122512-122582:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121230-121324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118115-118253:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116187-116246:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:113925-114071:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:112975-113061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:107646-107666:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:100622-102939:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_032123765.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(100622..102939,103858..103912,104742..104841,105535..105624,106733..106826,107646..107666,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125343,125756..125883,126965..127042))
location: region:100622-127042:-1
so has part: feature:126965-127042:-1:exon
so has part: feature:125756-125883:-1:exon
so has part: feature:125142-125343:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:107646-107666:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:100622-102939:-1:exon

position:127042:-1
position: 127042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126965-127042:-1:exon

position:126965:-1
position: 126965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125756-125883:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
SIO_000628: feature:122512-122582:-1:exon

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SIO_000300: 5
SIO_000628: feature:121230-121324:-1:exon

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SIO_000300: 6
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118115-118253:-1:exon

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SIO_000300: 9
SIO_000628: feature:116187-116246:-1:exon

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SIO_000300: 10
SIO_000628: feature:113925-114071:-1:exon

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SIO_000300: 11
SIO_000628: feature:112975-113061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107646-107666:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:100622-102939:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_032123762.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(100622..102939,103858..103912,104742..104841,105535..105624,106733..106826,107646..107666,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125343,125738..125858))
location: region:100622-125858:-1
so has part: feature:125738-125858:-1:exon
so has part: feature:125142-125343:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:107646-107666:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:100622-102939:-1:exon

position:125858:-1
position: 125858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125738-125858:-1:exon

position:125738:-1
position: 125738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125142-125343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122512-122582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121230-121324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:118115-118253:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:116187-116246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113925-114071:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112975-113061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107646-107666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100622-102939:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X2
translation: MNPEEQIVTWLISLGVLNSPKKIVDDPEEFLKTSLKDGTVLCKLINRLLPGSAEKYCLEPKNEADCISNIQEFLKGCALLKVEVFDPHDLYTGDQFSKVLSTLTAVNKATEDQLSKGPCSHLSSLNSAAGDPQSDSNGTASQSARVLRRQSKPVEMTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSAGDIAALLGNMEEISAFQQTLNQALEEVSKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAANPGILILTTSLSKPFLRLDKYVTLLQELERHMEEAHADHEDVLKAVTSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMTLTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKEDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(102799..102939,103858..103912,104742..104841,105535..105624,106733..106826,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125343,125756..125883,130521..130605,138356..138439,139455..139619))
location: region:102799-139619:-1
so has part: feature:139455-139619:-1:exon
so has part: feature:138356-138439:-1:exon
so has part: feature:130521-130605:-1:exon
so has part: feature:125756-125883:-1:exon
so has part: feature:125142-125343:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:102799-102939:-1:exon

XP_031979652.1
type: Protein
SIO_000068: ncbiprotein

position:102799:-1
position: 102799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139619:-1
position: 139619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139455-139619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138356-138439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130521-130605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125756-125883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125142-125343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122512-122582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121230-121324:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118115-118253:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116187-116246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:113925-114071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:112975-113061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:102799-102939:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X1
translation: MNPEEQIVTWLISLGVLNSPKKIVDDPEEFLKTSLKDGTVLCKLINRLLPGSAEKYCLEPKNEADCISNIQEFLKGCALLKVEVFDPHDLYTGDQFSKVLSTLTAVNKATEDQLSKGPCSHLSSLNSAAGDPQSDSNGTASQSARVLRRQSKPVEMTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSAGDIAALLGNMEEISAFQQTLNQALEEVSKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAANPGILILTTSLSKPFLRLDKYVTLLQELERHMEEAHADHEDVLKAVTSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMTLTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(102799..102939,103858..103912,104742..104841,105535..105624,106733..106826,107646..107666,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125343,125756..125883,130521..130605,138356..138439,139455..139619))
location: region:102799-139619:-1
so has part: feature:139455-139619:-1:exon
so has part: feature:138356-138439:-1:exon
so has part: feature:130521-130605:-1:exon
so has part: feature:125756-125883:-1:exon
so has part: feature:125142-125343:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:107646-107666:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:102799-102939:-1:exon

XP_031979651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139455-139619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138356-138439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130521-130605:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125756-125883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125142-125343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:122512-122582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121230-121324:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118115-118253:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:116187-116246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:113925-114071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:112975-113061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:107646-107666:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:102799-102939:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X3
translation: MTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSAGDIAALLGNMEEISAFQQTLNQALEEVSKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAANPGILILTTSLSKPFLRLDKYVTLLQELERHMEEAHADHEDVLKAVTSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMTLTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(102799..102939,103858..103912,104742..104841,105535..105624,106733..106826,107646..107666,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125340))
location: region:102799-125340:-1
so has part: feature:125142-125340:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:107646-107666:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:102799-102939:-1:exon

XP_031979653.1
type: Protein
SIO_000068: ncbiprotein

position:125340:-1
position: 125340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125142-125340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122512-122582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121230-121324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118115-118253:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116187-116246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113925-114071:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112975-113061:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107646-107666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:102799-102939:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X3
translation: MTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSAGDIAALLGNMEEISAFQQTLNQALEEVSKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAANPGILILTTSLSKPFLRLDKYVTLLQELERHMEEAHADHEDVLKAVTSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMTLTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(102799..102939,103858..103912,104742..104841,105535..105624,106733..106826,107646..107666,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125340))
location: region:102799-125340:-1
so has part: feature:125142-125340:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:107646-107666:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:102799-102939:-1:exon

XP_031979654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125142-125340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122512-122582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121230-121324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118115-118253:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116187-116246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113925-114071:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112975-113061:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107646-107666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:102799-102939:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X3
translation: MTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSAGDIAALLGNMEEISAFQQTLNQALEEVSKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAANPGILILTTSLSKPFLRLDKYVTLLQELERHMEEAHADHEDVLKAVTSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMTLTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(102799..102939,103858..103912,104742..104841,105535..105624,106733..106826,107646..107666,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125340))
location: region:102799-125340:-1
so has part: feature:125142-125340:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:107646-107666:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:102799-102939:-1:exon

XP_031979655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125142-125340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122512-122582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121230-121324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118115-118253:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116187-116246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113925-114071:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112975-113061:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107646-107666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:102799-102939:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X3
translation: MTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSAGDIAALLGNMEEISAFQQTLNQALEEVSKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAANPGILILTTSLSKPFLRLDKYVTLLQELERHMEEAHADHEDVLKAVTSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMTLTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(102799..102939,103858..103912,104742..104841,105535..105624,106733..106826,107646..107666,110498..110623,110905..111038,111910..111988,112975..113061,113925..114071,116187..116246,118115..118253,119556..119678,120484..120579,121230..121324,122512..122582,125142..125340))
location: region:102799-125340:-1
so has part: feature:125142-125340:-1:exon
so has part: feature:122512-122582:-1:exon
so has part: feature:121230-121324:-1:exon
so has part: feature:120484-120579:-1:exon
so has part: feature:119556-119678:-1:exon
so has part: feature:118115-118253:-1:exon
so has part: feature:116187-116246:-1:exon
so has part: feature:113925-114071:-1:exon
so has part: feature:112975-113061:-1:exon
so has part: feature:111910-111988:-1:exon
so has part: feature:110905-111038:-1:exon
so has part: feature:110498-110623:-1:exon
so has part: feature:107646-107666:-1:exon
so has part: feature:106733-106826:-1:exon
so has part: feature:105535-105624:-1:exon
so has part: feature:104742-104841:-1:exon
so has part: feature:103858-103912:-1:exon
so has part: feature:102799-102939:-1:exon

XP_031979656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125142-125340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122512-122582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121230-121324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:120484-120579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119556-119678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118115-118253:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116187-116246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113925-114071:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112975-113061:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:111910-111988:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110905-111038:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110498-110623:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107646-107666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106733-106826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:105535-105624:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:104742-104841:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:103858-103912:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:102799-102939:-1:exon

LOC116450868
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116450868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 132668..144768
location: region:132668-144768:1
so has part: feature:132668-144768:1:exon
subclass of: SO_0000011

116450868
type: Gene
SIO_000068: ncbigene

position:132668:1
position: 132668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144768:1
position: 144768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132668-144768:1:exon

LOC116450868
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116450868
product: uncharacterized LOC116450868
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004242990.1
SIO_010081: LOC116450868
subclass of: SO_0000673
so part of: LOC116450868
location: join(132668..133038,141156..144768)
location: region:132668-144768:1
so has part: feature:132668-133038:1:exon
so has part: feature:141156-144768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132668-133038:1:exon

position:133038:1
position: 133038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141156-144768:1:exon

position:141156:1
position: 141156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBMX
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(147380..157968)
location: region:147380-157968:-1
so has part: feature:147380-157968:-1:exon
subclass of: SO_0000010

116450866
type: Gene
SIO_000068: ncbigene

position:147380:-1
position: 147380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157968:-1
position: 157968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147380-157968:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 133 samples with support for all annotated introns
transcript id: XM_032123770.1
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(147380..147981,148476..148564,148656..148781,148896..149010,149371..149487,150548..150719,156161..156267,156467..156596,157868..157968))
location: region:147380-157968:-1
so has part: feature:157868-157968:-1:exon
so has part: feature:156467-156596:-1:exon
so has part: feature:156161-156267:-1:exon
so has part: feature:150548-150719:-1:exon
so has part: feature:149371-149487:-1:exon
so has part: feature:148896-149010:-1:exon
so has part: feature:148656-148781:-1:exon
so has part: feature:148476-148564:-1:exon
so has part: feature:147380-147981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157868-157968:-1:exon

position:157868:-1
position: 157868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156467-156596:-1:exon

position:156467:-1
position: 156467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156596:-1
position: 156596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:156161-156267:-1:exon

position:156161:-1
position: 156161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156267:-1
position: 156267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150548-150719:-1:exon

position:150548:-1
position: 150548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150719:-1
position: 150719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:149371-149487:-1:exon

position:149371:-1
position: 149371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149487:-1
position: 149487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:148896-149010:-1:exon

position:148896:-1
position: 148896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149010:-1
position: 149010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:148656-148781:-1:exon

position:148656:-1
position: 148656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148781:-1
position: 148781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:148476-148564:-1:exon

position:148476:-1
position: 148476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148564:-1
position: 148564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:147380-147981:-1:exon

position:147981:-1
position: 147981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 135 samples with support for all annotated introns
transcript id: XM_032123766.1
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(147380..147981,148476..148579,148656..148781,148896..149010,149371..149487,150548..150719,156161..156267,156467..156596,157868..157968))
location: region:147380-157968:-1
so has part: feature:157868-157968:-1:exon
so has part: feature:156467-156596:-1:exon
so has part: feature:156161-156267:-1:exon
so has part: feature:150548-150719:-1:exon
so has part: feature:149371-149487:-1:exon
so has part: feature:148896-149010:-1:exon
so has part: feature:148656-148781:-1:exon
so has part: feature:148476-148579:-1:exon
so has part: feature:147380-147981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157868-157968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156467-156596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156161-156267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150548-150719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149371-149487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148896-149010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148656-148781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148476-148579:-1:exon

position:148579:-1
position: 148579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:147380-147981:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 41 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_032123767.1
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(147380..147981,148476..148579,148656..148781,148896..149010,149371..149487,150548..150719,156161..156267,156467..156593,157868..157962))
location: region:147380-157962:-1
so has part: feature:157868-157962:-1:exon
so has part: feature:156467-156593:-1:exon
so has part: feature:156161-156267:-1:exon
so has part: feature:150548-150719:-1:exon
so has part: feature:149371-149487:-1:exon
so has part: feature:148896-149010:-1:exon
so has part: feature:148656-148781:-1:exon
so has part: feature:148476-148579:-1:exon
so has part: feature:147380-147981:-1:exon

position:157962:-1
position: 157962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157868-157962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156467-156593:-1:exon

position:156593:-1
position: 156593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:156161-156267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150548-150719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149371-149487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148896-149010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148656-148781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148476-148579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147380-147981:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_032123768.1
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(147380..147981,148476..148579,148656..148781,148896..149010,149371..149487,150548..150719,156161..156267,156467..156596,157702..157800))
location: region:147380-157800:-1
so has part: feature:157702-157800:-1:exon
so has part: feature:156467-156596:-1:exon
so has part: feature:156161-156267:-1:exon
so has part: feature:150548-150719:-1:exon
so has part: feature:149371-149487:-1:exon
so has part: feature:148896-149010:-1:exon
so has part: feature:148656-148781:-1:exon
so has part: feature:148476-148579:-1:exon
so has part: feature:147380-147981:-1:exon

position:157800:-1
position: 157800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157702-157800:-1:exon

position:157702:-1
position: 157702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156467-156596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156161-156267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150548-150719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149371-149487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148896-149010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148656-148781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148476-148579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147380-147981:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_032123769.1
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(147380..147981,148476..148579,148656..148781,148896..149010,149371..149487,150548..150719,156161..156267,156467..156593,157702..157788))
location: region:147380-157788:-1
so has part: feature:157702-157788:-1:exon
so has part: feature:156467-156593:-1:exon
so has part: feature:156161-156267:-1:exon
so has part: feature:150548-150719:-1:exon
so has part: feature:149371-149487:-1:exon
so has part: feature:148896-149010:-1:exon
so has part: feature:148656-148781:-1:exon
so has part: feature:148476-148579:-1:exon
so has part: feature:147380-147981:-1:exon

position:157788:-1
position: 157788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157702-157788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156467-156593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:156161-156267:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150548-150719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149371-149487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148896-149010:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148656-148781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148476-148579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147380-147981:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X2
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(147674..147981,148476..148564,148656..148781,148896..149010,149371..149487,150548..150719,156161..156267,156467..156575))
location: region:147674-156575:-1
so has part: feature:156467-156575:-1:exon
so has part: feature:156161-156267:-1:exon
so has part: feature:150548-150719:-1:exon
so has part: feature:149371-149487:-1:exon
so has part: feature:148896-149010:-1:exon
so has part: feature:148656-148781:-1:exon
so has part: feature:148476-148564:-1:exon
so has part: feature:147674-147981:-1:exon

XP_031979661.1
type: Protein
SIO_000068: ncbiprotein

position:147674:-1
position: 147674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156575:-1
position: 156575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156467-156575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156161-156267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150548-150719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149371-149487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148896-149010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148656-148781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148476-148564:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147674-147981:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(147674..147981,148476..148579,148656..148781,148896..149010,149371..149487,150548..150719,156161..156267,156467..156575))
location: region:147674-156575:-1
so has part: feature:156467-156575:-1:exon
so has part: feature:156161-156267:-1:exon
so has part: feature:150548-150719:-1:exon
so has part: feature:149371-149487:-1:exon
so has part: feature:148896-149010:-1:exon
so has part: feature:148656-148781:-1:exon
so has part: feature:148476-148579:-1:exon
so has part: feature:147674-147981:-1:exon

XP_031979657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156467-156575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156161-156267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150548-150719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149371-149487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148896-149010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148656-148781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148476-148579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147674-147981:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(147674..147981,148476..148579,148656..148781,148896..149010,149371..149487,150548..150719,156161..156267,156467..156575))
location: region:147674-156575:-1
so has part: feature:156467-156575:-1:exon
so has part: feature:156161-156267:-1:exon
so has part: feature:150548-150719:-1:exon
so has part: feature:149371-149487:-1:exon
so has part: feature:148896-149010:-1:exon
so has part: feature:148656-148781:-1:exon
so has part: feature:148476-148579:-1:exon
so has part: feature:147674-147981:-1:exon

XP_031979658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156467-156575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156161-156267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150548-150719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149371-149487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148896-149010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148656-148781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148476-148579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147674-147981:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(147674..147981,148476..148579,148656..148781,148896..149010,149371..149487,150548..150719,156161..156267,156467..156575))
location: region:147674-156575:-1
so has part: feature:156467-156575:-1:exon
so has part: feature:156161-156267:-1:exon
so has part: feature:150548-150719:-1:exon
so has part: feature:149371-149487:-1:exon
so has part: feature:148896-149010:-1:exon
so has part: feature:148656-148781:-1:exon
so has part: feature:148476-148579:-1:exon
so has part: feature:147674-147981:-1:exon

XP_031979659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156467-156575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156161-156267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150548-150719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149371-149487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148896-149010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148656-148781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148476-148579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147674-147981:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(147674..147981,148476..148579,148656..148781,148896..149010,149371..149487,150548..150719,156161..156267,156467..156575))
location: region:147674-156575:-1
so has part: feature:156467-156575:-1:exon
so has part: feature:156161-156267:-1:exon
so has part: feature:150548-150719:-1:exon
so has part: feature:149371-149487:-1:exon
so has part: feature:148896-149010:-1:exon
so has part: feature:148656-148781:-1:exon
so has part: feature:148476-148579:-1:exon
so has part: feature:147674-147981:-1:exon

XP_031979660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156467-156575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156161-156267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150548-150719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:149371-149487:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148896-149010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148656-148781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148476-148579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:147674-147981:-1:exon

LOC116451263
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451263
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(156342..156414)
location: region:156342-156414:-1
so has part: feature:156342-156414:-1:exon
subclass of: SO_0000578

116451263
type: Gene
SIO_000068: ncbigene

position:156342:-1
position: 156342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156414:-1
position: 156414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156342-156414:-1:exon

LOC116451263
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: snoRNA
gene: LOC116451263
product: small nucleolar RNA SNORD61
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00270
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004243159.1
SIO_010081: LOC116451263
subclass of: SO_0000673
so part of: LOC116451263
location: complement(156342..156414)
location: region:156342-156414:-1
so has part: feature:156342-156414:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156342-156414:-1:exon

LOC116450869
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116450869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 162627..191228
location: region:162627-191228:1
so has part: feature:162627-191228:1:exon
subclass of: SO_0000010

116450869
type: Gene
SIO_000068: ncbigene

position:162627:1
position: 162627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191228:1
position: 191228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162627-191228:1:exon

LOC116450869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116450869
product: transmembrane 9 superfamily member 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_032123771.1
SIO_010081: LOC116450869
subclass of: SO_0000673
so part of: LOC116450869
location: join(162627..162859,163233..163300,164589..164682,166255..166382,166607..166736,167690..167817,169002..169113,171238..171317,172209..172317,175493..175625,176713..176832,177010..177067,179337..179496,180152..180303,182098..182209,182620..182791,190087..190420)
location: region:162627-190420:1
so has part: feature:162627-162859:1:exon
so has part: feature:163233-163300:1:exon
so has part: feature:164589-164682:1:exon
so has part: feature:166255-166382:1:exon
so has part: feature:166607-166736:1:exon
so has part: feature:167690-167817:1:exon
so has part: feature:169002-169113:1:exon
so has part: feature:171238-171317:1:exon
so has part: feature:172209-172317:1:exon
so has part: feature:175493-175625:1:exon
so has part: feature:176713-176832:1:exon
so has part: feature:177010-177067:1:exon
so has part: feature:179337-179496:1:exon
so has part: feature:180152-180303:1:exon
so has part: feature:182098-182209:1:exon
so has part: feature:182620-182791:1:exon
so has part: feature:190087-190420:1:exon

position:190420:1
position: 190420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162627-162859:1:exon

position:162859:1
position: 162859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:163233-163300:1:exon

position:163233:1
position: 163233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163300:1
position: 163300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164589-164682:1:exon

position:164589:1
position: 164589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164682:1
position: 164682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:166255-166382:1:exon

position:166255:1
position: 166255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166382:1
position: 166382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:166607-166736:1:exon

position:166607:1
position: 166607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166736:1
position: 166736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:167690-167817:1:exon

position:167690:1
position: 167690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167817:1
position: 167817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169002-169113:1:exon

position:169002:1
position: 169002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169113:1
position: 169113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:171238-171317:1:exon

position:171238:1
position: 171238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171317:1
position: 171317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:172209-172317:1:exon

position:172209:1
position: 172209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172317:1
position: 172317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:175493-175625:1:exon

position:175493:1
position: 175493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175625:1
position: 175625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:176713-176832:1:exon

position:176713:1
position: 176713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176832:1
position: 176832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:177010-177067:1:exon

position:177010:1
position: 177010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177067:1
position: 177067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:179337-179496:1:exon

position:179337:1
position: 179337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179496:1
position: 179496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:180152-180303:1:exon

position:180152:1
position: 180152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180303:1
position: 180303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:182098-182209:1:exon

position:182098:1
position: 182098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182209:1
position: 182209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:182620-182791:1:exon

position:182620:1
position: 182620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182791:1
position: 182791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:190087-190420:1:exon

position:190087:1
position: 190087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116450869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116450869
product: transmembrane 9 superfamily member 2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_032123774.1
SIO_010081: LOC116450869
subclass of: SO_0000673
so part of: LOC116450869
location: join(162630..162859,163233..163300,166255..166382,166607..166736,167690..167817,169002..169113,171238..171317,172209..172317,175493..175625,176713..176832,177010..177067,179337..179496,180152..180303,182098..182209,182620..182791,190087..190420)
location: region:162630-190420:1
so has part: feature:162630-162859:1:exon
so has part: feature:163233-163300:1:exon
so has part: feature:166255-166382:1:exon
so has part: feature:166607-166736:1:exon
so has part: feature:167690-167817:1:exon
so has part: feature:169002-169113:1:exon
so has part: feature:171238-171317:1:exon
so has part: feature:172209-172317:1:exon
so has part: feature:175493-175625:1:exon
so has part: feature:176713-176832:1:exon
so has part: feature:177010-177067:1:exon
so has part: feature:179337-179496:1:exon
so has part: feature:180152-180303:1:exon
so has part: feature:182098-182209:1:exon
so has part: feature:182620-182791:1:exon
so has part: feature:190087-190420:1:exon

position:162630:1
position: 162630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162630-162859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163233-163300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166255-166382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166607-166736:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167690-167817:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169002-169113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171238-171317:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:172209-172317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175493-175625:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:176713-176832:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:177010-177067:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:179337-179496:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:180152-180303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:182098-182209:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:182620-182791:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:190087-190420:1:exon

LOC116450869
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116450869
product: transmembrane 9 superfamily member 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_032123773.1
SIO_010081: LOC116450869
subclass of: SO_0000673
so part of: LOC116450869
location: join(162663..162859,163233..163300,164589..164682,166255..166382,166607..166736,167690..167817,169002..169113,171238..171317,172209..172317,175493..175625,176713..176832,177010..177067,179337..179496,180152..180303,182098..182209,182620..182791,190593..191228)
location: region:162663-191228:1
so has part: feature:162663-162859:1:exon
so has part: feature:163233-163300:1:exon
so has part: feature:164589-164682:1:exon
so has part: feature:166255-166382:1:exon
so has part: feature:166607-166736:1:exon
so has part: feature:167690-167817:1:exon
so has part: feature:169002-169113:1:exon
so has part: feature:171238-171317:1:exon
so has part: feature:172209-172317:1:exon
so has part: feature:175493-175625:1:exon
so has part: feature:176713-176832:1:exon
so has part: feature:177010-177067:1:exon
so has part: feature:179337-179496:1:exon
so has part: feature:180152-180303:1:exon
so has part: feature:182098-182209:1:exon
so has part: feature:182620-182791:1:exon
so has part: feature:190593-191228:1:exon

position:162663:1
position: 162663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162663-162859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163233-163300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164589-164682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166255-166382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166607-166736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167690-167817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169002-169113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171238-171317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:172209-172317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:175493-175625:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:176713-176832:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:177010-177067:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:179337-179496:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:180152-180303:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:182098-182209:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182620-182791:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:190593-191228:1:exon

position:190593:1
position: 190593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116450869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116450869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 2-like isoform X2
translation: MRLLAAALLLVAPLGAAFYLPGLAPVSFCEEGEETESCKSLIELFVNRLDSVESVLPYEYDAFDFCQDKEEKRPSENLGQVLFGERIASSPYKFTFKKQETCKKVCTRSYDPGNSADKSKLAFLKKGMQLNYQHHWIIDNMPVTWCYDVEDGQKYCNPGFPIGCFVTPDGRVKDACVINSEFNKKNTFYLFNHVDITIMYHSGKDENWPGARLVMARLRPQSYKHTDENNLSCEGPPMEIPGEFTNKLNLVYTYSVTFEEKNNIKWASRWDYILESMPHTNIQWFSIMNSLVIVLFLSGMVAMIILRTLHKDIARYNQIDSSEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGQGTQIFIMTFITLFLACLGFLSPANRGALMTCAVVLWVLLGTPAGYVSARMYKTFRGEKWKTNVLLTALLCPGIVFADFFIMNLILWVKGSSAAIPFGTLVAILAMWFGISVPLTFVGAYFGFKEKPIEHPVRTNQIPRQIPEQSFFTKPLPGIVMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILLITCSEATVLLCYFHLCAEDYHWWWRSFLTSSFTAVYLFIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVSKIYSVVKVD
SIO_010081: LOC116450869
subclass of: SO_0000673
so part of: LOC116450869
location: join(162743..162859,163233..163300,164589..164682,166255..166382,166607..166736,167690..167817,169002..169113,171238..171317,172209..172317,175493..175625,176713..176832,177010..177067,179337..179496,180152..180303,182098..182209,182620..182791,190593..190660)
location: region:162743-190660:1
so has part: feature:162743-162859:1:exon
so has part: feature:163233-163300:1:exon
so has part: feature:164589-164682:1:exon
so has part: feature:166255-166382:1:exon
so has part: feature:166607-166736:1:exon
so has part: feature:167690-167817:1:exon
so has part: feature:169002-169113:1:exon
so has part: feature:171238-171317:1:exon
so has part: feature:172209-172317:1:exon
so has part: feature:175493-175625:1:exon
so has part: feature:176713-176832:1:exon
so has part: feature:177010-177067:1:exon
so has part: feature:179337-179496:1:exon
so has part: feature:180152-180303:1:exon
so has part: feature:182098-182209:1:exon
so has part: feature:182620-182791:1:exon
so has part: feature:190593-190660:1:exon

XP_031979664.1
type: Protein
SIO_000068: ncbiprotein

position:162743:1
position: 162743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190660:1
position: 190660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162743-162859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163233-163300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164589-164682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166255-166382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166607-166736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167690-167817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169002-169113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171238-171317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:172209-172317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:175493-175625:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:176713-176832:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:177010-177067:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:179337-179496:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:180152-180303:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:182098-182209:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182620-182791:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:190593-190660:1:exon

LOC116450869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116450869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 2-like isoform X1
translation: MRLLAAALLLVAPLGAAFYLPGLAPVSFCEEGEETESCKSLIELFVNRLDSVESVLPYEYDAFDFCQDKEEKRPSENLGQVLFGERIASSPYKFTFKKQETCKKVCTRSYDPGNSADKSKLAFLKKGMQLNYQHHWIIDNMPVTWCYDVEDGQKYCNPGFPIGCFVTPDGRVKDACVINSEFNKKNTFYLFNHVDITIMYHSGKDENWPGARLVMARLRPQSYKHTDENNLSCEGPPMEIPGEFTNKLNLVYTYSVTFEEKNNIKWASRWDYILESMPHTNIQWFSIMNSLVIVLFLSGMVAMIILRTLHKDIARYNQIDSSEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGQGTQIFIMTFITLFLACLGFLSPANRGALMTCAVVLWVLLGTPAGYVSARMYKTFRGEKWKTNVLLTALLCPGIVFADFFIMNLILWVKGSSAAIPFGTLVAILAMWFGISVPLTFVGAYFGFKEKPIEHPVRTNQIPRQIPEQSFFTKPLPGIVMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILLITCSEATVLLCYFHLCAEDYHWWWRSFLTSSFTAVYLFIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTAAVALRAFLCQKEVTGYTEEEISILKYKQSTMNIKLGQVNFSKALLCVIIHRWR
SIO_010081: LOC116450869
subclass of: SO_0000673
so part of: LOC116450869
location: join(162743..162859,163233..163300,164589..164682,166255..166382,166607..166736,167690..167817,169002..169113,171238..171317,172209..172317,175493..175625,176713..176832,177010..177067,179337..179496,180152..180303,182098..182209,182620..182791,190087..190250)
location: region:162743-190250:1
so has part: feature:162743-162859:1:exon
so has part: feature:163233-163300:1:exon
so has part: feature:164589-164682:1:exon
so has part: feature:166255-166382:1:exon
so has part: feature:166607-166736:1:exon
so has part: feature:167690-167817:1:exon
so has part: feature:169002-169113:1:exon
so has part: feature:171238-171317:1:exon
so has part: feature:172209-172317:1:exon
so has part: feature:175493-175625:1:exon
so has part: feature:176713-176832:1:exon
so has part: feature:177010-177067:1:exon
so has part: feature:179337-179496:1:exon
so has part: feature:180152-180303:1:exon
so has part: feature:182098-182209:1:exon
so has part: feature:182620-182791:1:exon
so has part: feature:190087-190250:1:exon

XP_031979662.1
type: Protein
SIO_000068: ncbiprotein

position:190250:1
position: 190250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162743-162859:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163233-163300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164589-164682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166255-166382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166607-166736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:167690-167817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169002-169113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171238-171317:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:172209-172317:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:175493-175625:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:176713-176832:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:177010-177067:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:179337-179496:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:180152-180303:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:182098-182209:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182620-182791:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:190087-190250:1:exon

LOC116450869
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116450869
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 2-like isoform X3
translation: MQLNYQHHWIIDNMPVTWCYDVEDGQKYCNPGFPIGCFVTPDGRVKDACVINSEFNKKNTFYLFNHVDITIMYHSGKDENWPGARLVMARLRPQSYKHTDENNLSCEGPPMEIPGEFTNKLNLVYTYSVTFEEKNNIKWASRWDYILESMPHTNIQWFSIMNSLVIVLFLSGMVAMIILRTLHKDIARYNQIDSSEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGQGTQIFIMTFITLFLACLGFLSPANRGALMTCAVVLWVLLGTPAGYVSARMYKTFRGEKWKTNVLLTALLCPGIVFADFFIMNLILWVKGSSAAIPFGTLVAILAMWFGISVPLTFVGAYFGFKEKPIEHPVRTNQIPRQIPEQSFFTKPLPGIVMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILLITCSEATVLLCYFHLCAEDYHWWWRSFLTSSFTAVYLFIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTAAVALRAFLCQKEVTGYTEEEISILKYKQSTMNIKLGQVNFSKALLCVIIHRWR
SIO_010081: LOC116450869
subclass of: SO_0000673
so part of: LOC116450869
location: join(166357..166382,166607..166736,167690..167817,169002..169113,171238..171317,172209..172317,175493..175625,176713..176832,177010..177067,179337..179496,180152..180303,182098..182209,182620..182791,190087..190250)
location: region:166357-190250:1
so has part: feature:166357-166382:1:exon
so has part: feature:166607-166736:1:exon
so has part: feature:167690-167817:1:exon
so has part: feature:169002-169113:1:exon
so has part: feature:171238-171317:1:exon
so has part: feature:172209-172317:1:exon
so has part: feature:175493-175625:1:exon
so has part: feature:176713-176832:1:exon
so has part: feature:177010-177067:1:exon
so has part: feature:179337-179496:1:exon
so has part: feature:180152-180303:1:exon
so has part: feature:182098-182209:1:exon
so has part: feature:182620-182791:1:exon
so has part: feature:190087-190250:1:exon

XP_031979665.1
type: Protein
SIO_000068: ncbiprotein

position:166357:1
position: 166357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166357-166382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166607-166736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167690-167817:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:169002-169113:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171238-171317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:172209-172317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175493-175625:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176713-176832:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:177010-177067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179337-179496:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:180152-180303:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:182098-182209:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:182620-182791:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:190087-190250:1:exon

ZIC3
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 312012..375310
location: region:312012-375310:1
so has part: feature:312012-375310:1:exon
subclass of: SO_0000010

116451051
type: Gene
SIO_000068: ncbigene

position:312012:1
position: 312012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375310:1
position: 375310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312012-375310:1:exon

ZIC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZIC3
product: Zic family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 31 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032124175.1
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(312012..313094,313738..313901,314417..315776,315965..316881,373775..375310)
location: region:312012-375310:1
so has part: feature:312012-313094:1:exon
so has part: feature:313738-313901:1:exon
so has part: feature:314417-315776:1:exon
so has part: feature:315965-316881:1:exon
so has part: feature:373775-375310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312012-313094:1:exon

position:313094:1
position: 313094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313738-313901:1:exon

position:313738:1
position: 313738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313901:1
position: 313901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314417-315776:1:exon

position:314417:1
position: 314417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315776:1
position: 315776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:315965-316881:1:exon

position:315965:1
position: 315965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316881:1
position: 316881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:373775-375310:1:exon

position:373775:1
position: 373775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZIC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZIC3
product: Zic family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 31 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_032124176.1
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(312012..313094,313738..313901,314417..315776,315965..316881,325941..326869)
location: region:312012-326869:1
so has part: feature:312012-313094:1:exon
so has part: feature:313738-313901:1:exon
so has part: feature:314417-315776:1:exon
so has part: feature:315965-316881:1:exon
so has part: feature:325941-326869:1:exon

position:326869:1
position: 326869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312012-313094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313738-313901:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314417-315776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315965-316881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325941-326869:1:exon

position:325941:1
position: 325941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZIC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ZIC3
product: Zic family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032124177.1
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(312012..313094,313738..313850,314417..315491)
location: region:312012-315491:1
so has part: feature:312012-313094:1:exon
so has part: feature:313738-313850:1:exon
so has part: feature:314417-315491:1:exon

position:315491:1
position: 315491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312012-313094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313738-313850:1:exon

position:313850:1
position: 313850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314417-315491:1:exon

ZIC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 3 isoform X1
translation: MTMLLDGGPQFPALGVGGFAAPRHHEMPGRDAAGGGMGLGPFGDSSHAAAFKLNAAPHDLAAGQSSAFTPQAPGYASALGHHHHHHHHAGQVPSYGGAAAFNSTRDFLFRNRGSGIADAASGTAQHGLFGGSPGGLHGPGGIPDTPGYLLFPGLHEQSPSHTSPNGHVDNGQMHLGLRGDLFGRPDPYRAVSSPRTDPYAGAQFHNYNHMNMNMGMNVAAHHHHHHHHGPGAFFRYMRQPIKQELSCKWLDESQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHICYWDECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAVGSTGSKDSTKTPPAALQSNPGHNPGLPPNFNEWYV
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(312053..313094,313738..313901,314417..314599)
location: region:312053-314599:1
so has part: feature:312053-313094:1:exon
so has part: feature:313738-313901:1:exon
so has part: feature:314417-314599:1:exon

XP_031980066.1
type: Protein
SIO_000068: ncbiprotein

position:312053:1
position: 312053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314599:1
position: 314599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312053-313094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313738-313901:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314417-314599:1:exon

ZIC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 3 isoform X1
translation: MTMLLDGGPQFPALGVGGFAAPRHHEMPGRDAAGGGMGLGPFGDSSHAAAFKLNAAPHDLAAGQSSAFTPQAPGYASALGHHHHHHHHAGQVPSYGGAAAFNSTRDFLFRNRGSGIADAASGTAQHGLFGGSPGGLHGPGGIPDTPGYLLFPGLHEQSPSHTSPNGHVDNGQMHLGLRGDLFGRPDPYRAVSSPRTDPYAGAQFHNYNHMNMNMGMNVAAHHHHHHHHGPGAFFRYMRQPIKQELSCKWLDESQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHICYWDECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAVGSTGSKDSTKTPPAALQSNPGHNPGLPPNFNEWYV
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(312053..313094,313738..313901,314417..314599)
location: region:312053-314599:1
so has part: feature:312053-313094:1:exon
so has part: feature:313738-313901:1:exon
so has part: feature:314417-314599:1:exon

XP_031980067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312053-313094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313738-313901:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314417-314599:1:exon

ZIC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 3 isoform X2
translation: MTMLLDGGPQFPALGVGGFAAPRHHEMPGRDAAGGGMGLGPFGDSSHAAAFKLNAAPHDLAAGQSSAFTPQAPGYASALGHHHHHHHHAGQVPSYGGAAAFNSTRDFLFRNRGSGIADAASGTAQHGLFGGSPGGLHGPGGIPDTPGYLLFPGLHEQSPSHTSPNGHVDNGQMHLGLRGDLFGRPDPYRAVSSPRTDPYAGAQFHNYNHMNMNMGMNVAAHHHHHHHHGPGAFFRYMRQPIKQELSCKWLDESQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHICYWDECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKVHESQGSDSSPAASSGYESSTPPAVGSTGSKDSTKTPPAALQSNPGHNPGLPPNFNEWYV
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(312053..313094,313738..313850,314417..314599)
location: region:312053-314599:1
so has part: feature:312053-313094:1:exon
so has part: feature:313738-313850:1:exon
so has part: feature:314417-314599:1:exon

XP_031980068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312053-313094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313738-313850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314417-314599:1:exon

LOC116451053
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 377925..387815
location: region:377925-387815:1
so has part: feature:377925-387815:1:exon
subclass of: SO_0000011

116451053
type: Gene
SIO_000068: ncbigene

position:377925:1
position: 377925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387815:1
position: 387815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377925-387815:1:exon

LOC116451053
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451053
product: uncharacterized LOC116451053
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004243076.1
SIO_010081: LOC116451053
subclass of: SO_0000673
so part of: LOC116451053
location: join(377925..378241,380339..380472,384271..384404,386837..386939,387634..387815)
location: region:377925-387815:1
so has part: feature:377925-378241:1:exon
so has part: feature:380339-380472:1:exon
so has part: feature:384271-384404:1:exon
so has part: feature:386837-386939:1:exon
so has part: feature:387634-387815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:377925-378241:1:exon

position:378241:1
position: 378241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:380339-380472:1:exon

position:380339:1
position: 380339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380472:1
position: 380472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384271-384404:1:exon

position:384271:1
position: 384271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384404:1
position: 384404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:386837-386939:1:exon

position:386837:1
position: 386837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386939:1
position: 386939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:387634-387815:1:exon

position:387634:1
position: 387634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451169
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 475291..488844
location: region:475291-488844:1
so has part: feature:475291-488844:1:exon
subclass of: SO_0000011

116451169
type: Gene
SIO_000068: ncbigene

position:475291:1
position: 475291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488844:1
position: 488844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475291-488844:1:exon

LOC116451169
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451169
product: uncharacterized LOC116451169
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004243116.1
SIO_010081: LOC116451169
subclass of: SO_0000673
so part of: LOC116451169
location: join(475291..475367,475981..476114,478197..488844)
location: region:475291-488844:1
so has part: feature:475291-475367:1:exon
so has part: feature:475981-476114:1:exon
so has part: feature:478197-488844:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475291-475367:1:exon

position:475367:1
position: 475367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475981-476114:1:exon

position:475981:1
position: 475981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476114:1
position: 476114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478197-488844:1:exon

position:478197:1
position: 478197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF13
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(531681..771557)
location: region:531681-771557:-1
so has part: feature:531681-771557:-1:exon
subclass of: SO_0000010

116450848
type: Gene
SIO_000068: ncbigene

position:531681:-1
position: 531681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771557:-1
position: 771557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531681-771557:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FGF13
product: fibroblast growth factor 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_032123717.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(531681..535823,536336..536534,580905..581008,586448..586558,641261..641428,771226..771557))
location: region:531681-771557:-1
so has part: feature:771226-771557:-1:exon
so has part: feature:641261-641428:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:531681-535823:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:771226-771557:-1:exon

position:771226:-1
position: 771226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641261-641428:-1:exon

position:641261:-1
position: 641261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641428:-1
position: 641428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:586448-586558:-1:exon

position:586448:-1
position: 586448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586558:-1
position: 586558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:580905-581008:-1:exon

position:580905:-1
position: 580905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581008:-1
position: 581008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:536336-536534:-1:exon

position:536336:-1
position: 536336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536534:-1
position: 536534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:531681-535823:-1:exon

position:535823:-1
position: 535823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FGF13
product: fibroblast growth factor 13, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_032123722.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(531681..535823,536336..536534,580905..581008,586448..586558,771226..771555))
location: region:531681-771555:-1
so has part: feature:771226-771555:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:531681-535823:-1:exon

position:771555:-1
position: 771555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771226-771555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531681-535823:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FGF13
product: fibroblast growth factor 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_032123719.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(531681..535823,536336..536534,580905..581008,586448..586558,641261..641428,668616..668951))
location: region:531681-668951:-1
so has part: feature:668616-668951:-1:exon
so has part: feature:641261-641428:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:531681-535823:-1:exon

position:668951:-1
position: 668951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668616-668951:-1:exon

position:668616:-1
position: 668616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641261-641428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531681-535823:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FGF13
product: fibroblast growth factor 13, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032123723.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(531681..535823,536336..536534,580905..581008,586448..586558,668616..668947))
location: region:531681-668947:-1
so has part: feature:668616-668947:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:531681-535823:-1:exon

position:668947:-1
position: 668947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668616-668947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531681-535823:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FGF13
product: fibroblast growth factor 13, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032123721.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(531681..535823,536336..536534,580905..581008,586448..586558,641261..641428,653752..653774))
location: region:531681-653774:-1
so has part: feature:653752-653774:-1:exon
so has part: feature:641261-641428:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:531681-535823:-1:exon

position:653774:-1
position: 653774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653752-653774:-1:exon

position:653752:-1
position: 653752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641261-641428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531681-535823:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: FGF13
product: fibroblast growth factor 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_032123720.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(531681..535823,536336..536534,580905..581008,586448..586558,588495..589163))
location: region:531681-589163:-1
so has part: feature:588495-589163:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:531681-535823:-1:exon

position:589163:-1
position: 589163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588495-589163:-1:exon

position:588495:-1
position: 588495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531681-535823:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X5
translation: MSGKVIKPKEEKDASKEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(535687..535823,536336..536534,580905..581008,586448..586558,771226..771274))
location: region:535687-771274:-1
so has part: feature:771226-771274:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:535687-535823:-1:exon

XP_031979613.1
type: Protein
SIO_000068: ncbiprotein

position:535687:-1
position: 535687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771274:-1
position: 771274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771226-771274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535687-535823:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X1
translation: MSGKVIKPKEEKDASKVMDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(535687..535823,536336..536534,580905..581008,586448..586558,641261..641428,771226..771274))
location: region:535687-771274:-1
so has part: feature:771226-771274:-1:exon
so has part: feature:641261-641428:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:535687-535823:-1:exon

XP_031979608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:771226-771274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641261-641428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535687-535823:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X6
translation: MGRRWKPIGQEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(535687..535823,536336..536534,580905..581008,586448..586558,668616..668646))
location: region:535687-668646:-1
so has part: feature:668616-668646:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:535687-535823:-1:exon

XP_031979614.1
type: Protein
SIO_000068: ncbiprotein

position:668646:-1
position: 668646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668616-668646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535687-535823:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X2
translation: MGRRWKPIGQVMDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(535687..535823,536336..536534,580905..581008,586448..586558,641261..641428,668616..668646))
location: region:535687-668646:-1
so has part: feature:668616-668646:-1:exon
so has part: feature:641261-641428:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:535687-535823:-1:exon

XP_031979610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:668616-668646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641261-641428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535687-535823:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X4
translation: MDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(535687..535823,536336..536534,580905..581008,586448..586558,641261..641426))
location: region:535687-641426:-1
so has part: feature:641261-641426:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:535687-535823:-1:exon

XP_031979612.1
type: Protein
SIO_000068: ncbiprotein

position:641426:-1
position: 641426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641261-641426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535687-535823:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X3
translation: MAAAIASSLIRQKRQAREREKSNACKCVNSPSKSKGSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(535687..535823,536336..536534,580905..581008,586448..586558,588495..588681))
location: region:535687-588681:-1
so has part: feature:588495-588681:-1:exon
so has part: feature:586448-586558:-1:exon
so has part: feature:580905-581008:-1:exon
so has part: feature:536336-536534:-1:exon
so has part: feature:535687-535823:-1:exon

XP_031979611.1
type: Protein
SIO_000068: ncbiprotein

position:588681:-1
position: 588681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588495-588681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586448-586558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580905-581008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536336-536534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535687-535823:-1:exon

LOC116450849
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116450849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 543638..556702
location: region:543638-556702:1
so has part: feature:543638-556702:1:exon
subclass of: SO_0000011

116450849
type: Gene
SIO_000068: ncbigene

position:543638:1
position: 543638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556702:1
position: 556702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543638-556702:1:exon

LOC116450849
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116450849
product: uncharacterized LOC116450849
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004242987.1
SIO_010081: LOC116450849
subclass of: SO_0000673
so part of: LOC116450849
location: join(543638..543962,548254..556702)
location: region:543638-556702:1
so has part: feature:543638-543962:1:exon
so has part: feature:548254-556702:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543638-543962:1:exon

position:543962:1
position: 543962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548254-556702:1:exon

position:548254:1
position: 548254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F9
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: F9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 821693..835433
location: region:821693-835433:1
so has part: feature:821693-835433:1:exon
subclass of: SO_0000010

116450847
type: Gene
SIO_000068: ncbigene

position:821693:1
position: 821693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835433:1
position: 835433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821693-835433:1:exon

F9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: F9
product: coagulation factor IX
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032123716.1
SIO_010081: F9
subclass of: SO_0000673
so part of: F9
location: join(821693..821819,824744..824907,825245..825269,827112..827225,828903..829031,831063..831301,831810..831933,834671..835433)
location: region:821693-835433:1
so has part: feature:821693-821819:1:exon
so has part: feature:824744-824907:1:exon
so has part: feature:825245-825269:1:exon
so has part: feature:827112-827225:1:exon
so has part: feature:828903-829031:1:exon
so has part: feature:831063-831301:1:exon
so has part: feature:831810-831933:1:exon
so has part: feature:834671-835433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:821693-821819:1:exon

position:821819:1
position: 821819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:824744-824907:1:exon

position:824744:1
position: 824744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824907:1
position: 824907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:825245-825269:1:exon

position:825245:1
position: 825245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825269:1
position: 825269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:827112-827225:1:exon

position:827112:1
position: 827112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827225:1
position: 827225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:828903-829031:1:exon

position:828903:1
position: 828903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829031:1
position: 829031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:831063-831301:1:exon

position:831063:1
position: 831063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831301:1
position: 831301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:831810-831933:1:exon

position:831810:1
position: 831810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831933:1
position: 831933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:834671-835433:1:exon

position:834671:1
position: 834671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: F9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor IX
translation: MANISLLLSICLLGACFGDENTVFIENKEASSVLQRQRRANSNRLEEVIPGNLERECIEEKCSYEEAREVFENEERTMQFWQTYIDGDQCNPNPCKNGAVCKDQINSYVCWCPAGYEGKNCEIDFTCAIKNGGCKHFCSHDPPQKVVCSCAAGYKLHEDGKSCEPTVPYPCGRITAPEAKRKLTRSMNTFEHWNITGNDPDDAHDEVLDNTTETSTAATTRITPVLRTGTRVVGGSESMKGEVPWQVLLVNSYGLGFCGGSIINEKWVVTAAHCLKPGYTHNLSAVAGEHNVESDDHTEQWRKVVRLLPHPTYNAAVNEYHNDIALLELDQPLTFNSYVTPICLGSREFTNALLKQGIGTVSGWGKQLFHGRTATTLQVLRVPFVDRPTCLKSTSTTILHNMFCAGFPSGGRDTCEGDSGGPYTTEIEGTWFLTGITSWGEECALPGKYGIYTRVSKYVNWIKQTTRLT
SIO_010081: F9
subclass of: SO_0000673
so part of: F9
location: join(821753..821819,824744..824907,825245..825269,827112..827225,828903..829031,831063..831301,831810..831933,834671..835218)
location: region:821753-835218:1
so has part: feature:821753-821819:1:exon
so has part: feature:824744-824907:1:exon
so has part: feature:825245-825269:1:exon
so has part: feature:827112-827225:1:exon
so has part: feature:828903-829031:1:exon
so has part: feature:831063-831301:1:exon
so has part: feature:831810-831933:1:exon
so has part: feature:834671-835218:1:exon

XP_031979607.1
type: Protein
SIO_000068: ncbiprotein

position:821753:1
position: 821753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835218:1
position: 835218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821753-821819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:824744-824907:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:825245-825269:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827112-827225:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828903-829031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831063-831301:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831810-831933:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834671-835218:1:exon

MCF2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(836807..891569)
location: region:836807-891569:-1
so has part: feature:836807-891569:-1:exon
subclass of: SO_0000010

116450911
type: Gene
SIO_000068: ncbigene

position:836807:-1
position: 836807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891569:-1
position: 891569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836807-891569:-1:exon

MCF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: MCF2
product: MCF.2 cell line derived transforming sequence, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032123890.1
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(836807..842352,842599..842699,844152..844264,844540..844652,844732..844838,845291..845354,845881..845959,846251..846343,849763..849984,850752..850877,851852..851944,852290..852382,852740..852809,852922..853037,854789..854855,855090..855178,855748..855836,858521..858692,858836..859027,860311..860502,861625..861744,862110..862224,862688..862812,865604..865753,866469..866585,867904..868023,873578..873668,879441..879555,880119..880187,891463..891569))
location: region:836807-891569:-1
so has part: feature:891463-891569:-1:exon
so has part: feature:880119-880187:-1:exon
so has part: feature:879441-879555:-1:exon
so has part: feature:873578-873668:-1:exon
so has part: feature:867904-868023:-1:exon
so has part: feature:866469-866585:-1:exon
so has part: feature:865604-865753:-1:exon
so has part: feature:862688-862812:-1:exon
so has part: feature:862110-862224:-1:exon
so has part: feature:861625-861744:-1:exon
so has part: feature:860311-860502:-1:exon
so has part: feature:858836-859027:-1:exon
so has part: feature:858521-858692:-1:exon
so has part: feature:855748-855836:-1:exon
so has part: feature:855090-855178:-1:exon
so has part: feature:854789-854855:-1:exon
so has part: feature:852922-853037:-1:exon
so has part: feature:852740-852809:-1:exon
so has part: feature:852290-852382:-1:exon
so has part: feature:851852-851944:-1:exon
so has part: feature:850752-850877:-1:exon
so has part: feature:849763-849984:-1:exon
so has part: feature:846251-846343:-1:exon
so has part: feature:845881-845959:-1:exon
so has part: feature:845291-845354:-1:exon
so has part: feature:844732-844838:-1:exon
so has part: feature:844540-844652:-1:exon
so has part: feature:844152-844264:-1:exon
so has part: feature:842599-842699:-1:exon
so has part: feature:836807-842352:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891463-891569:-1:exon

position:891463:-1
position: 891463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880119-880187:-1:exon

position:880119:-1
position: 880119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880187:-1
position: 880187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:879441-879555:-1:exon

position:879441:-1
position: 879441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879555:-1
position: 879555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:873578-873668:-1:exon

position:873578:-1
position: 873578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873668:-1
position: 873668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:867904-868023:-1:exon

position:867904:-1
position: 867904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868023:-1
position: 868023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:866469-866585:-1:exon

position:866469:-1
position: 866469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866585:-1
position: 866585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:865604-865753:-1:exon

position:865604:-1
position: 865604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865753:-1
position: 865753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:862688-862812:-1:exon

position:862688:-1
position: 862688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862812:-1
position: 862812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:862110-862224:-1:exon

position:862110:-1
position: 862110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862224:-1
position: 862224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:861625-861744:-1:exon

position:861625:-1
position: 861625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861744:-1
position: 861744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:860311-860502:-1:exon

position:860311:-1
position: 860311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860502:-1
position: 860502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:858836-859027:-1:exon

position:858836:-1
position: 858836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859027:-1
position: 859027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:858521-858692:-1:exon

position:858521:-1
position: 858521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858692:-1
position: 858692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:855748-855836:-1:exon

position:855748:-1
position: 855748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855836:-1
position: 855836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:855090-855178:-1:exon

position:855090:-1
position: 855090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855178:-1
position: 855178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:854789-854855:-1:exon

position:854789:-1
position: 854789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854855:-1
position: 854855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:852922-853037:-1:exon

position:852922:-1
position: 852922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853037:-1
position: 853037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:852740-852809:-1:exon

position:852740:-1
position: 852740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852809:-1
position: 852809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:852290-852382:-1:exon

position:852290:-1
position: 852290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852382:-1
position: 852382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:851852-851944:-1:exon

position:851852:-1
position: 851852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851944:-1
position: 851944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:850752-850877:-1:exon

position:850752:-1
position: 850752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850877:-1
position: 850877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:849763-849984:-1:exon

position:849763:-1
position: 849763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849984:-1
position: 849984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:846251-846343:-1:exon

position:846251:-1
position: 846251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846343:-1
position: 846343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:845881-845959:-1:exon

position:845881:-1
position: 845881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845959:-1
position: 845959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:845291-845354:-1:exon

position:845291:-1
position: 845291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845354:-1
position: 845354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:844732-844838:-1:exon

position:844732:-1
position: 844732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844838:-1
position: 844838
reference: sequence
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note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
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MCF2
type: Messenger RNA
subclass of: SO_0000234
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note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
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MCF2
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note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
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SIO_010081: MCF2
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SIO_000300: 16
SIO_000628: feature:854789-854855:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:852922-853037:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:852740-852809:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852290-852382:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:851852-851944:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:850752-850877:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:849763-849984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:846251-846343:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:845881-845959:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:845291-845357:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:844732-844838:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:844540-844652:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:844152-844264:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:842599-842699:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:836821-838755:-1:exon

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL isoform X4
translation: MERYYRLLRAAALLEAAAETAIPIYAKDISDDLMKEFAFLSGGRGKDKAWIITLPDNARFNEVPEENVSKVLTYLTSVPSQHESDTKFILILDRRLDTWTSVKTTLQKIAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSQEDFLLKLPVVMLSSVSDLLTYIDEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKEIAQMLQCFGTELAETELPEDMYSIERILALRTERYCQLKEDITAVTKEGNLLLSSFEEPDSGECSQDQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQVELPDTGDSVPQVKQRLKDLDHFDGMAQDLIGKAQVVILHGHQLAANHHYALNLICQQCNELRHHSDLLSDEIKRKQMRLQKTLDLHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIESFLESSSAYLNYDPQALHYDFESVLTSELKCQIQSVQVKLENVRSMFENRQSCFKKLLDKHVRPVQLVAPRPENPPRSKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRNSLQYFISDSDDSLDTLKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWTGHRKGPTKMKDLARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKVEKQQPGSCSEQLPLSSQLSDGKQQRASISSEENDSERTSPVMLDSGLVSPQNKPHRSWPGMSQSLEICEGLEEWSGHQYLSNCSDTEEEDGNQLSPGKYTALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADAALCNTRKFSSP
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(838715..838755,842599..842699,844152..844264,844540..844652,844732..844838,845291..845354,845881..845959,846251..846343,849763..849984,850752..850877,851852..851944,852290..852382,852740..852809,852922..853037,854789..854855,855090..855178,855748..855836,858521..858692,858836..859027,860311..860502,861625..861744,862110..862224,862688..862812,865604..865753,866469..866585,867904..868023,873578..873668,879441..879555,880119..880187,891463..891517))
location: region:838715-891517:-1
so has part: feature:891463-891517:-1:exon
so has part: feature:880119-880187:-1:exon
so has part: feature:879441-879555:-1:exon
so has part: feature:873578-873668:-1:exon
so has part: feature:867904-868023:-1:exon
so has part: feature:866469-866585:-1:exon
so has part: feature:865604-865753:-1:exon
so has part: feature:862688-862812:-1:exon
so has part: feature:862110-862224:-1:exon
so has part: feature:861625-861744:-1:exon
so has part: feature:860311-860502:-1:exon
so has part: feature:858836-859027:-1:exon
so has part: feature:858521-858692:-1:exon
so has part: feature:855748-855836:-1:exon
so has part: feature:855090-855178:-1:exon
so has part: feature:854789-854855:-1:exon
so has part: feature:852922-853037:-1:exon
so has part: feature:852740-852809:-1:exon
so has part: feature:852290-852382:-1:exon
so has part: feature:851852-851944:-1:exon
so has part: feature:850752-850877:-1:exon
so has part: feature:849763-849984:-1:exon
so has part: feature:846251-846343:-1:exon
so has part: feature:845881-845959:-1:exon
so has part: feature:845291-845354:-1:exon
so has part: feature:844732-844838:-1:exon
so has part: feature:844540-844652:-1:exon
so has part: feature:844152-844264:-1:exon
so has part: feature:842599-842699:-1:exon
so has part: feature:838715-838755:-1:exon

XP_031979783.1
type: Protein
SIO_000068: ncbiprotein

position:838715:-1
position: 838715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891517:-1
position: 891517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891463-891517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880119-880187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:879441-879555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873578-873668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867904-868023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866469-866585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865604-865753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:862688-862812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:862110-862224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:861625-861744:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:860311-860502:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:858836-859027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858521-858692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:855748-855836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:855090-855178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:854789-854855:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:852922-853037:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:852740-852809:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852290-852382:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:851852-851944:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:850752-850877:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:849763-849984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:846251-846343:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:845881-845959:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:845291-845354:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:844732-844838:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:844540-844652:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:844152-844264:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:842599-842699:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:838715-838755:-1:exon

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL isoform X3
translation: MERYYRLLRAAALLEAAAETAIPIYAKDISDDLMKEFAFLSGGRGKDKAWIITLPDNARFNEVPEENVSKVLTYLTSVPSQHESDTKFILILDRRLDTWTSVKTTLQKIAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSQEDFLLKLPVVMLSSVSDLLTYIDEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKEIAQMLQCFGTELAETELPEDMYSIERILALRTERYCQLKEDITAVTKEGNLLLSSFEEPDSGECSQDQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQVELPDTGDSVPQVKQRLKDLDHFDGMAQDLIGKAQVVILHGHQLAANHHYALNLICQQCNELRHHSDLLSDEIKRKQMRLQKTLDLHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIESFLESSSAYLNYDPQALHYDFESVLTSELKCQIQSVQVKLENVRSMFENRQSCFKKLLDKHVRPVQLVAPRPENPPRSKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRNSLQYFISDSDDSLDTLKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWTGHRKGPTKMKDLARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKAVEKQQPGSCSEQLPLSSQLSDGKQQRASISSEENDSERTSPVMLDSGLVSPQNKPHRSWPGMSQSLEICEGLEEWSGHQYLSNCSDTEEEDGNQLSPGKYTALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADAALCNTRKFSSP
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(838715..838755,842599..842699,844152..844264,844540..844652,844732..844838,845291..845357,845881..845959,846251..846343,849763..849984,850752..850877,851852..851944,852290..852382,852740..852809,852922..853037,854789..854855,855090..855178,855748..855836,858521..858692,858836..859027,860311..860502,861625..861744,862110..862224,862688..862812,865604..865753,866469..866585,867904..868023,873578..873668,879441..879555,880119..880187,891463..891517))
location: region:838715-891517:-1
so has part: feature:891463-891517:-1:exon
so has part: feature:880119-880187:-1:exon
so has part: feature:879441-879555:-1:exon
so has part: feature:873578-873668:-1:exon
so has part: feature:867904-868023:-1:exon
so has part: feature:866469-866585:-1:exon
so has part: feature:865604-865753:-1:exon
so has part: feature:862688-862812:-1:exon
so has part: feature:862110-862224:-1:exon
so has part: feature:861625-861744:-1:exon
so has part: feature:860311-860502:-1:exon
so has part: feature:858836-859027:-1:exon
so has part: feature:858521-858692:-1:exon
so has part: feature:855748-855836:-1:exon
so has part: feature:855090-855178:-1:exon
so has part: feature:854789-854855:-1:exon
so has part: feature:852922-853037:-1:exon
so has part: feature:852740-852809:-1:exon
so has part: feature:852290-852382:-1:exon
so has part: feature:851852-851944:-1:exon
so has part: feature:850752-850877:-1:exon
so has part: feature:849763-849984:-1:exon
so has part: feature:846251-846343:-1:exon
so has part: feature:845881-845959:-1:exon
so has part: feature:845291-845357:-1:exon
so has part: feature:844732-844838:-1:exon
so has part: feature:844540-844652:-1:exon
so has part: feature:844152-844264:-1:exon
so has part: feature:842599-842699:-1:exon
so has part: feature:838715-838755:-1:exon

XP_031979782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:891463-891517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880119-880187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:879441-879555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873578-873668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867904-868023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866469-866585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865604-865753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:862688-862812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:862110-862224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:861625-861744:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:860311-860502:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:858836-859027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858521-858692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:855748-855836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:855090-855178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:854789-854855:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:852922-853037:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:852740-852809:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852290-852382:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:851852-851944:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:850752-850877:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:849763-849984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:846251-846343:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:845881-845959:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:845291-845357:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:844732-844838:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:844540-844652:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:844152-844264:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:842599-842699:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:838715-838755:-1:exon

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL isoform X2
translation: MERYYRLLRAAALLEAAAETAIPIYAKDISDDLMKEFAFLSGGRGKDKAWIITLPDNARFNEVPEENVSKVLTYLTSVPSQHESDTKFILILDRRLDTWTSVKTTLQKIAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSQEDFLLKLPVVMLSSVSDLLTYIDEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKEIAQMLQCFGTELAETELPEDMYSIERILALRTERYCQLKEDITAVTKEGNLLLSSFEEPDSGECSQDQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQVELPDTGDSVPQVKQRLKDLDHFDGMAQDLIGKAQVVILHGHQLAANHHYALNLICQQCNELRHHSDLLSDEIKRKQMRLQKTLDLHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIESFLESSSAYLNYDPQALHYDFESVLTSELKCQIQSVQVKLENVRSMFENRQSCFKKLLDKHVRPVQLVAPRPENPPRSKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRNSLQYFISDSDDSLDTLKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWTGHRKGPTKMKDLARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKVEKQQPGSCSEQLPLSSQLSDGKQQRASISSEENDSERTSPVMLDSGLVSPQNKPHRSWPGMSQSLEICEGLEEWSGHQYLSNCSDTEEEDGNQLSPGKYTALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADFFARALGRRSGRRDGV
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(842300..842352,842599..842699,844152..844264,844540..844652,844732..844838,845291..845354,845881..845959,846251..846343,849763..849984,850752..850877,851852..851944,852290..852382,852740..852809,852922..853037,854789..854855,855090..855178,855748..855836,858521..858692,858836..859027,860311..860502,861625..861744,862110..862224,862688..862812,865604..865753,866469..866585,867904..868023,873578..873668,879441..879555,880119..880187,891463..891517))
location: region:842300-891517:-1
so has part: feature:891463-891517:-1:exon
so has part: feature:880119-880187:-1:exon
so has part: feature:879441-879555:-1:exon
so has part: feature:873578-873668:-1:exon
so has part: feature:867904-868023:-1:exon
so has part: feature:866469-866585:-1:exon
so has part: feature:865604-865753:-1:exon
so has part: feature:862688-862812:-1:exon
so has part: feature:862110-862224:-1:exon
so has part: feature:861625-861744:-1:exon
so has part: feature:860311-860502:-1:exon
so has part: feature:858836-859027:-1:exon
so has part: feature:858521-858692:-1:exon
so has part: feature:855748-855836:-1:exon
so has part: feature:855090-855178:-1:exon
so has part: feature:854789-854855:-1:exon
so has part: feature:852922-853037:-1:exon
so has part: feature:852740-852809:-1:exon
so has part: feature:852290-852382:-1:exon
so has part: feature:851852-851944:-1:exon
so has part: feature:850752-850877:-1:exon
so has part: feature:849763-849984:-1:exon
so has part: feature:846251-846343:-1:exon
so has part: feature:845881-845959:-1:exon
so has part: feature:845291-845354:-1:exon
so has part: feature:844732-844838:-1:exon
so has part: feature:844540-844652:-1:exon
so has part: feature:844152-844264:-1:exon
so has part: feature:842599-842699:-1:exon
so has part: feature:842300-842352:-1:exon

XP_031979781.1
type: Protein
SIO_000068: ncbiprotein

position:842300:-1
position: 842300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891463-891517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880119-880187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:879441-879555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873578-873668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867904-868023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866469-866585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865604-865753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:862688-862812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:862110-862224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:861625-861744:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:860311-860502:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:858836-859027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858521-858692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:855748-855836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:855090-855178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:854789-854855:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:852922-853037:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:852740-852809:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852290-852382:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:851852-851944:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:850752-850877:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:849763-849984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:846251-846343:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:845881-845959:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:845291-845354:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:844732-844838:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:844540-844652:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:844152-844264:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:842599-842699:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:842300-842352:-1:exon

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL isoform X1
translation: MERYYRLLRAAALLEAAAETAIPIYAKDISDDLMKEFAFLSGGRGKDKAWIITLPDNARFNEVPEENVSKVLTYLTSVPSQHESDTKFILILDRRLDTWTSVKTTLQKIAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSQEDFLLKLPVVMLSSVSDLLTYIDEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKEIAQMLQCFGTELAETELPEDMYSIERILALRTERYCQLKEDITAVTKEGNLLLSSFEEPDSGECSQDQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQVELPDTGDSVPQVKQRLKDLDHFDGMAQDLIGKAQVVILHGHQLAANHHYALNLICQQCNELRHHSDLLSDEIKRKQMRLQKTLDLHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIESFLESSSAYLNYDPQALHYDFESVLTSELKCQIQSVQVKLENVRSMFENRQSCFKKLLDKHVRPVQLVAPRPENPPRSKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRNSLQYFISDSDDSLDTLKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWTGHRKGPTKMKDLARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKAVEKQQPGSCSEQLPLSSQLSDGKQQRASISSEENDSERTSPVMLDSGLVSPQNKPHRSWPGMSQSLEICEGLEEWSGHQYLSNCSDTEEEDGNQLSPGKYTALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADFFARALGRRSGRRDGV
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(842300..842352,842599..842699,844152..844264,844540..844652,844732..844838,845291..845357,845881..845959,846251..846343,849763..849984,850752..850877,851852..851944,852290..852382,852740..852809,852922..853037,854789..854855,855090..855178,855748..855836,858521..858692,858836..859027,860311..860502,861625..861744,862110..862224,862688..862812,865604..865753,866469..866585,867904..868023,873578..873668,879441..879555,880119..880187,891463..891517))
location: region:842300-891517:-1
so has part: feature:891463-891517:-1:exon
so has part: feature:880119-880187:-1:exon
so has part: feature:879441-879555:-1:exon
so has part: feature:873578-873668:-1:exon
so has part: feature:867904-868023:-1:exon
so has part: feature:866469-866585:-1:exon
so has part: feature:865604-865753:-1:exon
so has part: feature:862688-862812:-1:exon
so has part: feature:862110-862224:-1:exon
so has part: feature:861625-861744:-1:exon
so has part: feature:860311-860502:-1:exon
so has part: feature:858836-859027:-1:exon
so has part: feature:858521-858692:-1:exon
so has part: feature:855748-855836:-1:exon
so has part: feature:855090-855178:-1:exon
so has part: feature:854789-854855:-1:exon
so has part: feature:852922-853037:-1:exon
so has part: feature:852740-852809:-1:exon
so has part: feature:852290-852382:-1:exon
so has part: feature:851852-851944:-1:exon
so has part: feature:850752-850877:-1:exon
so has part: feature:849763-849984:-1:exon
so has part: feature:846251-846343:-1:exon
so has part: feature:845881-845959:-1:exon
so has part: feature:845291-845357:-1:exon
so has part: feature:844732-844838:-1:exon
so has part: feature:844540-844652:-1:exon
so has part: feature:844152-844264:-1:exon
so has part: feature:842599-842699:-1:exon
so has part: feature:842300-842352:-1:exon

XP_031979780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:891463-891517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880119-880187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:879441-879555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873578-873668:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867904-868023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866469-866585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865604-865753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:862688-862812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:862110-862224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:861625-861744:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:860311-860502:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:858836-859027:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858521-858692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:855748-855836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:855090-855178:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:854789-854855:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:852922-853037:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:852740-852809:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:852290-852382:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:851852-851944:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:850752-850877:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:849763-849984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:846251-846343:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:845881-845959:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:845291-845357:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:844732-844838:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:844540-844652:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:844152-844264:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:842599-842699:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:842300-842352:-1:exon

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL isoform X5
translation: MAEAGPRRGGRPARDAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSQEDFLLKLPVVMLSSVSDLLTYIDEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKEIAQMLQCFGTELAETELPEDMYSIERILALRTERYCQLKEDITAVTKEGNLLLSSFEEPDSGECSQDQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQVELPDTGDSVPQVKQRLKDLDHFDGMAQDLIGKAQVVILHGHQLAANHHYALNLICQQCNELRHHSDLLSDEIKRKQMRLQKTLDLHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIESFLESSSAYLNYDPQALHYDFESVLTSELKCQIQSVQVKLENVRSMFENRQSCFKKLLDKHVRPVQLVAPRPENPPRSKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRNSLQYFISDSDDSLDTLKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWTGHRKGPTKMKDLARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKAVEKQQPGSCSEQLPLSSQLSDGKQQRASISSEENDSERTSPVMLDSGLVSPQNKPHRSWPGMSQSLEICEGLEEWSGHQYLSNCSDTEEEDGNQLSPGKYTALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADFFARALGRRSGRRDGV
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(842300..842352,842599..842699,844152..844264,844540..844652,844732..844838,845291..845357,845881..845959,846251..846343,849763..849984,850752..850877,851852..851944,852290..852382,852740..852809,852922..853037,854789..854855,855090..855178,855748..855836,858521..858692,858836..859027,860311..860502,861625..861744,862110..862224,862688..862812,865604..865753,866469..866585,867904..868023,871369..871416))
location: region:842300-871416:-1
so has part: feature:871369-871416:-1:exon
so has part: feature:867904-868023:-1:exon
so has part: feature:866469-866585:-1:exon
so has part: feature:865604-865753:-1:exon
so has part: feature:862688-862812:-1:exon
so has part: feature:862110-862224:-1:exon
so has part: feature:861625-861744:-1:exon
so has part: feature:860311-860502:-1:exon
so has part: feature:858836-859027:-1:exon
so has part: feature:858521-858692:-1:exon
so has part: feature:855748-855836:-1:exon
so has part: feature:855090-855178:-1:exon
so has part: feature:854789-854855:-1:exon
so has part: feature:852922-853037:-1:exon
so has part: feature:852740-852809:-1:exon
so has part: feature:852290-852382:-1:exon
so has part: feature:851852-851944:-1:exon
so has part: feature:850752-850877:-1:exon
so has part: feature:849763-849984:-1:exon
so has part: feature:846251-846343:-1:exon
so has part: feature:845881-845959:-1:exon
so has part: feature:845291-845357:-1:exon
so has part: feature:844732-844838:-1:exon
so has part: feature:844540-844652:-1:exon
so has part: feature:844152-844264:-1:exon
so has part: feature:842599-842699:-1:exon
so has part: feature:842300-842352:-1:exon

XP_031979784.1
type: Protein
SIO_000068: ncbiprotein

position:871416:-1
position: 871416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871369-871416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867904-868023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866469-866585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865604-865753:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:862688-862812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:862110-862224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:861625-861744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:860311-860502:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:858836-859027:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:858521-858692:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855748-855836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855090-855178:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:854789-854855:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:852922-853037:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:852740-852809:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:852290-852382:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:851852-851944:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:850752-850877:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:849763-849984:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:846251-846343:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:845881-845959:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:845291-845357:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:844732-844838:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:844540-844652:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:844152-844264:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:842599-842699:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:842300-842352:-1:exon

ATP11C
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(895519..950693)
location: region:895519-950693:-1
so has part: feature:895519-950693:-1:exon
subclass of: SO_0000010

116450778
type: Gene
SIO_000068: ncbigene

position:895519:-1
position: 895519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950693:-1
position: 950693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895519-950693:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_032123519.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(895519..898904,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950693))
location: region:895519-950693:-1
so has part: feature:950596-950693:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:895519-898904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950693:-1:exon

position:950596:-1
position: 950596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

position:933385:-1
position: 933385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933504:-1
position: 933504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

position:931571:-1
position: 931571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931660:-1
position: 931660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

position:928000:-1
position: 928000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928080:-1
position: 928080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

position:926917:-1
position: 926917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927024:-1
position: 927024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

position:926191:-1
position: 926191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926319:-1
position: 926319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

position:923715:-1
position: 923715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923818:-1
position: 923818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

position:923046:-1
position: 923046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923096:-1
position: 923096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

position:922132:-1
position: 922132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922196:-1
position: 922196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

position:921461:-1
position: 921461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921542:-1
position: 921542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

position:920939:-1
position: 920939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921089:-1
position: 921089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

position:919937:-1
position: 919937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920134:-1
position: 920134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

position:918870:-1
position: 918870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919031:-1
position: 919031
reference: sequence
type: ReverseStrandPosition
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ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_032123511.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
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location: region:895519-950693:-1
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SIO_000300: 29
SIO_000628: feature:895519-898904:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 129 samples with support for all annotated introns
transcript id: XM_032123516.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(895519..898904,900083..900178,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950693))
location: region:895519-950693:-1
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urn:…
SIO_000300: 30
SIO_000628: feature:895519-898904:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032123521.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(895519..898904,901042..901107,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950693))
location: region:895519-950693:-1
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urn:…
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position:901042:-1
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urn:…
SIO_000300: 30
SIO_000628: feature:895519-898904:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032123520.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(895519..898904,903137..903290,904758..904861,905655..905720,906205..906220,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950693))
location: region:895519-950693:-1
so has part: feature:950596-950693:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:906205-906220:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:895519-898904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:906205-906220:-1:exon

position:906205:-1
position: 906205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906220:-1
position: 906220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:895519-898904:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032123512.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(895519..898904,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,939333..939433))
location: region:895519-939433:-1
so has part: feature:939333-939433:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:895519-898904:-1:exon

position:939433:-1
position: 939433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939333-939433:-1:exon

position:939333:-1
position: 939333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:895519-898904:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X6
translation: MLRRSLSRLCAGEEKRVGTRTVVVGHRPVSDTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVQKESEKIKVGDIVEVKADETFPCDLIFLASSSIDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEMQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCISEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKCTYISSSPDEIALVKGAEKYQLLHVLNFDPVRRRMSVIVRTTTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTQKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQAGPFDLPVLVSYKRIENGYVKTEDAVTNLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(898788..898904,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950622))
location: region:898788-950622:-1
so has part: feature:950596-950622:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:898788-898904:-1:exon

XP_031979410.1
type: Protein
SIO_000068: ncbiprotein

position:898788:-1
position: 898788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950622:-1
position: 950622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:898788-898904:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X1
translation: MLRRSLSRLCAGEEKRVGTRTVVVGHRPVSDTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVQKESEKIKVGDIVEVKADETFPCDLIFLASSSIDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEMQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCISEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENDFMKIRNQKNETELYQLLHVLNFDPVRRRMSVIVRTTTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTQKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQAGPFDLPVLVSYKRIENGYVKTEDAVTNLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(898788..898904,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950622))
location: region:898788-950622:-1
so has part: feature:950596-950622:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:898788-898904:-1:exon

XP_031979402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:898788-898904:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X8
translation: MLRRSLSRLCAGEEKRVGTRTVVVGHRPVSDTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVQKESEKIKVGDIVEVKADETFPCDLIFLASSSIDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEMQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCISEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENDFMKIRNQKNETELYQLLHVLNFDPVRRRMSVIVRTTTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTQKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQEHPLSSCFLKLPAITAFLGVNKAGPFDLPVLVSYKRIENGYVKTEDAVTNLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(898788..898904,901042..901107,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950622))
location: region:898788-950622:-1
so has part: feature:950596-950622:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:901042-901107:-1:exon
so has part: feature:898788-898904:-1:exon

XP_031979412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:901042-901107:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:898788-898904:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X2
translation: MWSVWCAGEEKRVGTRTVVVGHRPVSDTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVQKESEKIKVGDIVEVKADETFPCDLIFLASSSIDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEMQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCISEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENDFMKIRNQKNETELYQLLHVLNFDPVRRRMSVIVRTTTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTQKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQAGPFDLPVLVSYKRIENGYVKTEDAVTNLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(898788..898904,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,939333..939347))
location: region:898788-939347:-1
so has part: feature:939333-939347:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:898788-898904:-1:exon

XP_031979403.1
type: Protein
SIO_000068: ncbiprotein

position:939347:-1
position: 939347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939333-939347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:898788-898904:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_032123517.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(898816..898904,901042..901132,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950693))
location: region:898816-950693:-1
so has part: feature:950596-950693:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:901042-901132:-1:exon
so has part: feature:898816-898904:-1:exon

position:898816:-1
position: 898816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:901042-901132:-1:exon

position:901132:-1
position: 901132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:898816-898904:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_032123513.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(898816..898904,901042..901132,903137..903290,904758..904861,905655..905720,906205..906220,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950693))
location: region:898816-950693:-1
so has part: feature:950596-950693:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:906205-906220:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:901042-901132:-1:exon
so has part: feature:898816-898904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:906205-906220:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:901042-901132:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:898816-898904:-1:exon

ATP11C
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XR_004242973.1
SIO_010081: ATP11C
so part of: ATP11C
location: complement(join(898841..898904,900083..900178,903137..903290,904758..904861,905655..905720,906205..906220,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950693))
location: region:898841-950693:-1
so has part: feature:950596-950693:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:906205-906220:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:900083-900178:-1:exon
so has part: feature:898841-898904:-1:exon

position:898841:-1
position: 898841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:906205-906220:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:900083-900178:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:898841-898904:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X7
translation: MLRRSLSRLCAGEEKRVGTRTVVVGHRPVSDTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVQKESEKIKVGDIVEVKADETFPCDLIFLASSSIDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEMQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCISEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENDFMKIRNQKNETELYQLLHVLNFDPVRRRMSVIVRTTTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTQKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKILTAFGVWKLDLRDHCFHRAGVHRHSQASVRHPILDVDEPLCDLGLPCFLCVFLILLGRSHLAFLEAAKNVFCICSYADFCFHMAGNNSPDLYQPFPRNSSNSFKKYKREKSSGWPL
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(898891..898904,903137..903290,904758..904861,905655..905720,906205..906220,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950622))
location: region:898891-950622:-1
so has part: feature:950596-950622:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:906205-906220:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:898891-898904:-1:exon

XP_031979411.1
type: Protein
SIO_000068: ncbiprotein

position:898891:-1
position: 898891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:906205-906220:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:898891-898904:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X4
translation: MLRRSLSRLCAGEEKRVGTRTVVVGHRPVSDTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVQKESEKIKVGDIVEVKADETFPCDLIFLASSSIDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEMQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCISEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENDFMKIRNQKNETELYQLLHVLNFDPVRRRMSVIVRTTTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTQKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQSSRKAPDSLSARPSVTPLLLRTFSDESNVL
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(900086..900178,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950622))
location: region:900086-950622:-1
so has part: feature:950596-950622:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:900086-900178:-1:exon

XP_031979407.1
type: Protein
SIO_000068: ncbiprotein

position:900086:-1
position: 900086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:900086-900178:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_032123518.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(900093..900178,901042..901132,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950693))
location: region:900093-950693:-1
so has part: feature:950596-950693:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:901042-901132:-1:exon
so has part: feature:900093-900178:-1:exon

position:900093:-1
position: 900093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:901042-901132:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:900093-900178:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032123514.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(900093..900178,901042..901132,903137..903290,904758..904861,905655..905720,906205..906220,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950693))
location: region:900093-950693:-1
so has part: feature:950596-950693:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:906205-906220:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:901042-901132:-1:exon
so has part: feature:900093-900178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950693:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:906205-906220:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:901042-901132:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:900093-900178:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X5
translation: MLRRSLSRLCAGEEKRVGTRTVVVGHRPVSDTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVQKESEKIKVGDIVEVKADETFPCDLIFLASSSIDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEMQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCISEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENDFMKIRNQKNETELYQLLHVLNFDPVRRRMSVIVRTTTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTQKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQVTKRLPSSGTSTIFMLSQTSSNHSFSWSE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(901043..901132,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950622))
location: region:901043-950622:-1
so has part: feature:950596-950622:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:901043-901132:-1:exon

XP_031979408.1
type: Protein
SIO_000068: ncbiprotein

position:901043:-1
position: 901043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:901043-901132:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X5
translation: MLRRSLSRLCAGEEKRVGTRTVVVGHRPVSDTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVQKESEKIKVGDIVEVKADETFPCDLIFLASSSIDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEMQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCISEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENDFMKIRNQKNETELYQLLHVLNFDPVRRRMSVIVRTTTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTQKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQVTKRLPSSGTSTIFMLSQTSSNHSFSWSE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(901043..901132,903137..903290,904758..904861,905655..905720,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950622))
location: region:901043-950622:-1
so has part: feature:950596-950622:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:901043-901132:-1:exon

XP_031979409.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:901043-901132:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X3
translation: MLRRSLSRLCAGEEKRVGTRTVVVGHRPVSDTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVQKESEKIKVGDIVEVKADETFPCDLIFLASSSIDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEMQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCISEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENDFMKIRNQKNETELYQLLHVLNFDPVRRRMSVIVRTTTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTQKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKILTAFGVWKLDLRDHCFHRAGVHRHSQASVRHPILDVDEPLCDLGLPCFLCVFLILLGRSHLAFLEAAKNVFCICSYADFCFHMAGNNSPDLYQPFPRNSSNSFKKYKREKSSGNEAPSFLRNIHYLHAFSNFQQSQLFLE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(901047..901132,903137..903290,904758..904861,905655..905720,906205..906220,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950622))
location: region:901047-950622:-1
so has part: feature:950596-950622:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:906205-906220:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:901047-901132:-1:exon

XP_031979404.1
type: Protein
SIO_000068: ncbiprotein

position:901047:-1
position: 901047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:906205-906220:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:901047-901132:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X3
translation: MLRRSLSRLCAGEEKRVGTRTVVVGHRPVSDTEAYVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVQKESEKIKVGDIVEVKADETFPCDLIFLASSSIDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMYDEEMQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCISEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKCTYISSSPDEIALVKGAEKYGFTFLGLENDFMKIRNQKNETELYQLLHVLNFDPVRRRMSVIVRTTTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTQKEYDKIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKILTAFGVWKLDLRDHCFHRAGVHRHSQASVRHPILDVDEPLCDLGLPCFLCVFLILLGRSHLAFLEAAKNVFCICSYADFCFHMAGNNSPDLYQPFPRNSSNSFKKYKREKSSGNEAPSFLRNIHYLHAFSNFQQSQLFLE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(901047..901132,903137..903290,904758..904861,905655..905720,906205..906220,907512..907647,910086..910213,911260..911319,911691..911836,913092..913194,913849..914023,914365..914628,915185..915366,915938..916041,916717..916790,917614..917685,918611..918768,918870..919031,919937..920134,920939..921089,921461..921542,922132..922196,923046..923096,923715..923818,926191..926319,926917..927024,928000..928080,931571..931660,933385..933504,950596..950622))
location: region:901047-950622:-1
so has part: feature:950596-950622:-1:exon
so has part: feature:933385-933504:-1:exon
so has part: feature:931571-931660:-1:exon
so has part: feature:928000-928080:-1:exon
so has part: feature:926917-927024:-1:exon
so has part: feature:926191-926319:-1:exon
so has part: feature:923715-923818:-1:exon
so has part: feature:923046-923096:-1:exon
so has part: feature:922132-922196:-1:exon
so has part: feature:921461-921542:-1:exon
so has part: feature:920939-921089:-1:exon
so has part: feature:919937-920134:-1:exon
so has part: feature:918870-919031:-1:exon
so has part: feature:918611-918768:-1:exon
so has part: feature:917614-917685:-1:exon
so has part: feature:916717-916790:-1:exon
so has part: feature:915938-916041:-1:exon
so has part: feature:915185-915366:-1:exon
so has part: feature:914365-914628:-1:exon
so has part: feature:913849-914023:-1:exon
so has part: feature:913092-913194:-1:exon
so has part: feature:911691-911836:-1:exon
so has part: feature:911260-911319:-1:exon
so has part: feature:910086-910213:-1:exon
so has part: feature:907512-907647:-1:exon
so has part: feature:906205-906220:-1:exon
so has part: feature:905655-905720:-1:exon
so has part: feature:904758-904861:-1:exon
so has part: feature:903137-903290:-1:exon
so has part: feature:901047-901132:-1:exon

XP_031979405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:950596-950622:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933385-933504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931571-931660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928000-928080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926917-927024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926191-926319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:923715-923818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:923046-923096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922132-922196:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:921461-921542:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920939-921089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919937-920134:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:918870-919031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918611-918768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:917614-917685:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:916717-916790:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:915938-916041:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:915185-915366:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914365-914628:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913849-914023:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:913092-913194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911691-911836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:911260-911319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:910086-910213:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:907512-907647:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:906205-906220:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:905655-905720:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:904758-904861:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:903137-903290:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:901047-901132:-1:exon

ARL13A
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(960432..965619)
location: region:960432-965619:-1
so has part: feature:960432-965619:-1:exon
subclass of: SO_0000010

116451158
type: Gene
SIO_000068: ncbigene

position:960432:-1
position: 960432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965619:-1
position: 965619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960432-965619:-1:exon

ARL13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARL13A
product: ADP ribosylation factor like GTPase 13A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032124321.1
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(960432..961795,962104..962205,963261..963366,963696..963945,964195..964265,965291..965619))
location: region:960432-965619:-1
so has part: feature:965291-965619:-1:exon
so has part: feature:964195-964265:-1:exon
so has part: feature:963696-963945:-1:exon
so has part: feature:963261-963366:-1:exon
so has part: feature:962104-962205:-1:exon
so has part: feature:960432-961795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:965291-965619:-1:exon

position:965291:-1
position: 965291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:964195-964265:-1:exon

position:964195:-1
position: 964195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964265:-1
position: 964265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:963696-963945:-1:exon

position:963696:-1
position: 963696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963945:-1
position: 963945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:963261-963366:-1:exon

position:963261:-1
position: 963261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963366:-1
position: 963366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:962104-962205:-1:exon

position:962104:-1
position: 962104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962205:-1
position: 962205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:960432-961795:-1:exon

position:961795:-1
position: 961795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARL13A
product: ADP ribosylation factor like GTPase 13A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032124319.1
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(960432..961795,962104..962205,962540..962738,962821..962905,963261..963366,963696..963945,964195..964265,965291..965619))
location: region:960432-965619:-1
so has part: feature:965291-965619:-1:exon
so has part: feature:964195-964265:-1:exon
so has part: feature:963696-963945:-1:exon
so has part: feature:963261-963366:-1:exon
so has part: feature:962821-962905:-1:exon
so has part: feature:962540-962738:-1:exon
so has part: feature:962104-962205:-1:exon
so has part: feature:960432-961795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:965291-965619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964195-964265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963696-963945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963261-963366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962821-962905:-1:exon

position:962821:-1
position: 962821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962905:-1
position: 962905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:962540-962738:-1:exon

position:962540:-1
position: 962540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962738:-1
position: 962738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:962104-962205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960432-961795:-1:exon

ARL13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARL13A
product: ADP ribosylation factor like GTPase 13A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032124320.1
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(960432..961545,961698..961795,962104..962738,962821..962905,963261..963366,963696..963945,964195..964265,965291..965619))
location: region:960432-965619:-1
so has part: feature:965291-965619:-1:exon
so has part: feature:964195-964265:-1:exon
so has part: feature:963696-963945:-1:exon
so has part: feature:963261-963366:-1:exon
so has part: feature:962821-962905:-1:exon
so has part: feature:962104-962738:-1:exon
so has part: feature:961698-961795:-1:exon
so has part: feature:960432-961545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:965291-965619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964195-964265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963696-963945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963261-963366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962821-962905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962104-962738:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961698-961795:-1:exon

position:961698:-1
position: 961698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:960432-961545:-1:exon

position:961545:-1
position: 961545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: ARL13A
product: ADP ribosylation factor like GTPase 13A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_032124318.1
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(960432..961795,962104..962738,962821..962905,963261..963366,963696..963945,964195..964265,965291..965619))
location: region:960432-965619:-1
so has part: feature:965291-965619:-1:exon
so has part: feature:964195-964265:-1:exon
so has part: feature:963696-963945:-1:exon
so has part: feature:963261-963366:-1:exon
so has part: feature:962821-962905:-1:exon
so has part: feature:962104-962738:-1:exon
so has part: feature:960432-961795:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:965291-965619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964195-964265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963696-963945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963261-963366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962821-962905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962104-962738:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960432-961795:-1:exon

ARL13A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13A isoform X2
translation: MFHLFSHCWSWLQAIQEPVRKVTLLVMGLDNAGKTSVIMDIERALAGEVLRDAQPGQTRLRVDRFEVTLVDLPGGQRSRSAWRSHYSEAHGLLFVLDSGDLARVEEARKVLSRVLSHPDVSGKPLLLLANKQDAAAALLPCELIERLCLERLVNENRSPCRIHRA
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(962194..962205,963261..963366,963696..963945,964195..964265,965291..965349))
location: region:962194-965349:-1
so has part: feature:965291-965349:-1:exon
so has part: feature:964195-964265:-1:exon
so has part: feature:963696-963945:-1:exon
so has part: feature:963261-963366:-1:exon
so has part: feature:962194-962205:-1:exon

XP_031980212.1
type: Protein
SIO_000068: ncbiprotein

position:962194:-1
position: 962194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965349:-1
position: 965349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965291-965349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964195-964265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963696-963945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963261-963366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962194-962205:-1:exon

ARL13A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13A isoform X1
translation: MFHLFSHCWSWLQAIQEPVRKVTLLVMGLDNAGKTSVIMDIERALAGEVLRDAQPGQTRLRVDRFEVTLVDLPGGQRSRSAWRSHYSEAHGLLFVLDSGDLARVEEARKVLSRVLSHPDVSGKPLLLLANKQDAAAALLPCELIERLCLERLVNENRSPCRIGPAVPRGRGRGEERGAPGSAPRLPPPAPGGKH
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(962725..962738,962821..962905,963261..963366,963696..963945,964195..964265,965291..965349))
location: region:962725-965349:-1
so has part: feature:965291-965349:-1:exon
so has part: feature:964195-964265:-1:exon
so has part: feature:963696-963945:-1:exon
so has part: feature:963261-963366:-1:exon
so has part: feature:962821-962905:-1:exon
so has part: feature:962725-962738:-1:exon

XP_031980209.1
type: Protein
SIO_000068: ncbiprotein

position:962725:-1
position: 962725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965291-965349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964195-964265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963696-963945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963261-963366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962821-962905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962725-962738:-1:exon

ARL13A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13A isoform X1
translation: MFHLFSHCWSWLQAIQEPVRKVTLLVMGLDNAGKTSVIMDIERALAGEVLRDAQPGQTRLRVDRFEVTLVDLPGGQRSRSAWRSHYSEAHGLLFVLDSGDLARVEEARKVLSRVLSHPDVSGKPLLLLANKQDAAAALLPCELIERLCLERLVNENRSPCRIGPAVPRGRGRGEERGAPGSAPRLPPPAPGGKH
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(962725..962738,962821..962905,963261..963366,963696..963945,964195..964265,965291..965349))
location: region:962725-965349:-1
so has part: feature:965291-965349:-1:exon
so has part: feature:964195-964265:-1:exon
so has part: feature:963696-963945:-1:exon
so has part: feature:963261-963366:-1:exon
so has part: feature:962821-962905:-1:exon
so has part: feature:962725-962738:-1:exon

XP_031980210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:965291-965349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964195-964265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963696-963945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963261-963366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962821-962905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962725-962738:-1:exon

ARL13A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13A isoform X1
translation: MFHLFSHCWSWLQAIQEPVRKVTLLVMGLDNAGKTSVIMDIERALAGEVLRDAQPGQTRLRVDRFEVTLVDLPGGQRSRSAWRSHYSEAHGLLFVLDSGDLARVEEARKVLSRVLSHPDVSGKPLLLLANKQDAAAALLPCELIERLCLERLVNENRSPCRIGPAVPRGRGRGEERGAPGSAPRLPPPAPGGKH
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(962725..962738,962821..962905,963261..963366,963696..963945,964195..964265,965291..965349))
location: region:962725-965349:-1
so has part: feature:965291-965349:-1:exon
so has part: feature:964195-964265:-1:exon
so has part: feature:963696-963945:-1:exon
so has part: feature:963261-963366:-1:exon
so has part: feature:962821-962905:-1:exon
so has part: feature:962725-962738:-1:exon

XP_031980211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:965291-965349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964195-964265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963696-963945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963261-963366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962821-962905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962725-962738:-1:exon

XKRX
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: XKRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 967797..978735
location: region:967797-978735:1
so has part: feature:967797-978735:1:exon
subclass of: SO_0000010

116451242
type: Gene
SIO_000068: ncbigene

position:967797:1
position: 967797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978735:1
position: 978735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967797-978735:1:exon

XKRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: XKRX
product: XK related X-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_032124448.1
SIO_010081: XKRX
subclass of: SO_0000673
so part of: XKRX
location: join(967797..967867,973232..973586,975715..975974,977398..978735)
location: region:967797-978735:1
so has part: feature:967797-967867:1:exon
so has part: feature:973232-973586:1:exon
so has part: feature:975715-975974:1:exon
so has part: feature:977398-978735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:967797-967867:1:exon

position:967867:1
position: 967867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:973232-973586:1:exon

position:973232:1
position: 973232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973586:1
position: 973586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:975715-975974:1:exon

position:975715:1
position: 975715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975974:1
position: 975974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:977398-978735:1:exon

position:977398:1
position: 977398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451085
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(972853..973295)
location: region:972853-973295:-1
so has part: feature:972853-973295:-1:exon
subclass of: SO_0000010

116451085
type: Gene
SIO_000068: ncbigene

position:972853:-1
position: 972853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973295:-1
position: 973295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972853-973295:-1:exon

LOC116451085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: LOC116451085
product: vegetative cell wall protein gp1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_032124219.1
SIO_010081: LOC116451085
subclass of: SO_0000673
so part of: LOC116451085
location: complement(join(972853..972865,972934..973295))
location: region:972853-973295:-1
so has part: feature:972934-973295:-1:exon
so has part: feature:972853-972865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:972934-973295:-1:exon

position:972934:-1
position: 972934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972853-972865:-1:exon

position:972865:-1
position: 972865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: LOC116451085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vegetative cell wall protein gp1-like
translation: MAAPARPGPARALSPAAAPSRAAAERGAALRGGAGRGAAPPPHRAPTGGPAPAPPSPAAPAPLRDRPDSPRPPSPGSTGRASPPGPHPPARGPGSWYPSPALATTLLLREPRCYCALVPIRIFY
SIO_010081: LOC116451085
subclass of: SO_0000673
so part of: LOC116451085
location: complement(join(972853..972865,972934..973295))
location: region:972853-973295:-1
so has part: feature:972934-973295:-1:exon
so has part: feature:972853-972865:-1:exon

XP_031980110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972934-973295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:972853-972865:-1:exon

XKRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: XKRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 2
translation: MDGPSGGCPPAAAPSRAKLPLGIVFSTALFCGEGAAAAVLCLSYGHSDDRFWLALTVFFVLCPSVLVQLTLIFVHRDLSRDRPLVLLMHLLQLGPVIRCMEALLVYCWSGREEEPYVTITRKRRLRKGYEVEMEQEVGHSERRLATHRNAFKRVAVIQAFLGSTPQLTLQLYISVLEKYVPVARAVLMAICLVSVTYGALVCNILAIQVKYDDYKVQLRPLAFLCIVLWRSLEISTRIAVLVLFSTVFKHWIIPIALANLLVVFFLPWVQFWRSGNSLPDNIEKNFSRLGTVVVLCAFTLLYSSINMFCWSAVQLKLADRDLIDKSQNWGRLAVYYVARLAENTALVILWYFFKTDAYENVCTPLLVLQLLLGYCLGIYFMLLFYQYLHPCRQLFRHNVADFLHCVCCRRQPPGTPLCLEAPFEPGVRHSIV
SIO_010081: XKRX
subclass of: SO_0000673
so part of: XKRX
location: join(973294..973586,975715..975974,977398..978143)
location: region:973294-978143:1
so has part: feature:973294-973586:1:exon
so has part: feature:975715-975974:1:exon
so has part: feature:977398-978143:1:exon

XP_031980339.1
type: Protein
SIO_000068: ncbiprotein

position:973294:1
position: 973294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978143:1
position: 978143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:973294-973586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:975715-975974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977398-978143:1:exon

NOX1
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: NOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 978840..984557
location: region:978840-984557:1
so has part: feature:978840-984557:1:exon
subclass of: SO_0000010

116451241
type: Gene
SIO_000068: ncbigene

position:978840:1
position: 978840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984557:1
position: 984557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978840-984557:1:exon

NOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: NOX1
product: NADPH oxidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_032124447.1
SIO_010081: NOX1
subclass of: SO_0000673
so part of: NOX1
location: join(978840..979860,980876..980971,981352..981462,981543..981627,981703..981848,981926..982107,982294..982432,982530..982622,982789..983015,983095..983257,983344..983490,983696..983820,984000..984557)
location: region:978840-984557:1
so has part: feature:978840-979860:1:exon
so has part: feature:980876-980971:1:exon
so has part: feature:981352-981462:1:exon
so has part: feature:981543-981627:1:exon
so has part: feature:981703-981848:1:exon
so has part: feature:981926-982107:1:exon
so has part: feature:982294-982432:1:exon
so has part: feature:982530-982622:1:exon
so has part: feature:982789-983015:1:exon
so has part: feature:983095-983257:1:exon
so has part: feature:983344-983490:1:exon
so has part: feature:983696-983820:1:exon
so has part: feature:984000-984557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:978840-979860:1:exon

position:979860:1
position: 979860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:980876-980971:1:exon

position:980876:1
position: 980876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980971:1
position: 980971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:981352-981462:1:exon

position:981352:1
position: 981352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981462:1
position: 981462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:981543-981627:1:exon

position:981543:1
position: 981543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981627:1
position: 981627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:981703-981848:1:exon

position:981703:1
position: 981703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981848:1
position: 981848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:981926-982107:1:exon

position:981926:1
position: 981926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982107:1
position: 982107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:982294-982432:1:exon

position:982294:1
position: 982294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982432:1
position: 982432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:982530-982622:1:exon

position:982530:1
position: 982530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982622:1
position: 982622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:982789-983015:1:exon

position:982789:1
position: 982789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983015:1
position: 983015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:983095-983257:1:exon

position:983095:1
position: 983095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983257:1
position: 983257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:983344-983490:1:exon

position:983344:1
position: 983344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983490:1
position: 983490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:983696-983820:1:exon

position:983696:1
position: 983696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983820:1
position: 983820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:984000-984557:1:exon

position:984000:1
position: 984000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: NOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADPH oxidase 1
translation: MGNWLVNHWFSAAVLAAWLGINIFLFTYYFLFFDRDVQYFYTRAILGSALAWARASAKCLNFNSMLILLPVCRNLLSFLRGTCSCCRRTLRKQLDHNLTFHKLVAYALALLTAMHTIAHLFNLERYNQSQQATDGSLPAVLSKMHLQGSNKWLNPIHSNQTTVEYVTFTTIPGLTGVIITLALILMVTSSTEFIRRNYFELFWYTHHLFLVYFAGLVIHGIAGLVRGQTEQSMAEVPPHQCAEYLPQRDQNCTHDCCKDPEFGSIPAESWKWVLAPIILYVFERILRVWRAQQKVVVTKVVMHPARVLELQMQKKGFRMEVGQYIFVNCPAISLLEWHPFTLTSAPEEDFFSIHIRAAGDWTERLIDTFQLEIARVEVDGPFGTASEDVFQYEVAMLVGAGIGVTPFASILKSIWYKFQQADQTLKTKKIYFYWLCRDTGAFAWFNDLLASLEHKMAESGKADFLTYRLFLTGWNTSIANNVALHFDTTTDTVTGLRHKTIFGRPMWNMEFAAVAAAHPRSVVGVFLCGPEALAKSLQKSCHQHSSLDPRKVKFYFNKENF
SIO_010081: NOX1
subclass of: SO_0000673
so part of: NOX1
location: join(979816..979860,980876..980971,981352..981462,981543..981627,981703..981848,981926..982107,982294..982432,982530..982622,982789..983015,983095..983257,983344..983490,983696..983820,984000..984126)
location: region:979816-984126:1
so has part: feature:979816-979860:1:exon
so has part: feature:980876-980971:1:exon
so has part: feature:981352-981462:1:exon
so has part: feature:981543-981627:1:exon
so has part: feature:981703-981848:1:exon
so has part: feature:981926-982107:1:exon
so has part: feature:982294-982432:1:exon
so has part: feature:982530-982622:1:exon
so has part: feature:982789-983015:1:exon
so has part: feature:983095-983257:1:exon
so has part: feature:983344-983490:1:exon
so has part: feature:983696-983820:1:exon
so has part: feature:984000-984126:1:exon

XP_031980338.1
type: Protein
SIO_000068: ncbiprotein

position:979816:1
position: 979816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984126:1
position: 984126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979816-979860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:980876-980971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:981352-981462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:981543-981627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:981703-981848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:981926-982107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:982294-982432:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:982530-982622:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:982789-983015:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:983095-983257:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:983344-983490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:983696-983820:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:984000-984126:1:exon

CSTF2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(985080..992322)
location: region:985080-992322:-1
so has part: feature:985080-992322:-1:exon
subclass of: SO_0000010

116451244
type: Gene
SIO_000068: ncbigene

position:985080:-1
position: 985080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992322:-1
position: 992322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:985080-992322:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032124456.1
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(985080..985280,985407..985532,985675..985800,986206..986468,989555..989678,989802..989957,990058..990177,990293..990429,990914..991083,991985..992063,992208..992322))
location: region:985080-992322:-1
so has part: feature:992208-992322:-1:exon
so has part: feature:991985-992063:-1:exon
so has part: feature:990914-991083:-1:exon
so has part: feature:990293-990429:-1:exon
so has part: feature:990058-990177:-1:exon
so has part: feature:989802-989957:-1:exon
so has part: feature:989555-989678:-1:exon
so has part: feature:986206-986468:-1:exon
so has part: feature:985675-985800:-1:exon
so has part: feature:985407-985532:-1:exon
so has part: feature:985080-985280:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992208-992322:-1:exon

position:992208:-1
position: 992208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:991985-992063:-1:exon

position:991985:-1
position: 991985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992063:-1
position: 992063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:990914-991083:-1:exon

position:990914:-1
position: 990914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991083:-1
position: 991083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:990293-990429:-1:exon

position:990293:-1
position: 990293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990429:-1
position: 990429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:990058-990177:-1:exon

position:990058:-1
position: 990058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990177:-1
position: 990177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:989802-989957:-1:exon

position:989802:-1
position: 989802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989957:-1
position: 989957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:989555-989678:-1:exon

position:989555:-1
position: 989555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989678:-1
position: 989678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:986206-986468:-1:exon

position:986206:-1
position: 986206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986468:-1
position: 986468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:985675-985800:-1:exon

position:985675:-1
position: 985675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985800:-1
position: 985800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:985407-985532:-1:exon

position:985407:-1
position: 985407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985532:-1
position: 985532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:985080-985280:-1:exon

position:985280:-1
position: 985280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032124454.1
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(985080..985280,985407..985532,985675..985800,986206..986468,986767..986918,987284..987425,989185..989247,989555..989678,989802..989957,990058..990177,990293..990429,990914..991083,991985..992063,992208..992322))
location: region:985080-992322:-1
so has part: feature:992208-992322:-1:exon
so has part: feature:991985-992063:-1:exon
so has part: feature:990914-991083:-1:exon
so has part: feature:990293-990429:-1:exon
so has part: feature:990058-990177:-1:exon
so has part: feature:989802-989957:-1:exon
so has part: feature:989555-989678:-1:exon
so has part: feature:989185-989247:-1:exon
so has part: feature:987284-987425:-1:exon
so has part: feature:986767-986918:-1:exon
so has part: feature:986206-986468:-1:exon
so has part: feature:985675-985800:-1:exon
so has part: feature:985407-985532:-1:exon
so has part: feature:985080-985280:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992208-992322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991985-992063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990914-991083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990293-990429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990058-990177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989802-989957:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989555-989678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989185-989247:-1:exon

position:989185:-1
position: 989185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989247:-1
position: 989247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:987284-987425:-1:exon

position:987284:-1
position: 987284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987425:-1
position: 987425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:986767-986918:-1:exon

position:986767:-1
position: 986767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986918:-1
position: 986918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:986206-986468:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:985675-985800:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:985407-985532:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:985080-985280:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_032124453.1
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(985080..985280,985407..985532,985675..985800,986206..986468,986767..986918,987284..987425,988040..988099,989185..989247,989555..989678,989802..989957,990058..990177,990293..990429,990914..991083,991985..992063,992208..992322))
location: region:985080-992322:-1
so has part: feature:992208-992322:-1:exon
so has part: feature:991985-992063:-1:exon
so has part: feature:990914-991083:-1:exon
so has part: feature:990293-990429:-1:exon
so has part: feature:990058-990177:-1:exon
so has part: feature:989802-989957:-1:exon
so has part: feature:989555-989678:-1:exon
so has part: feature:989185-989247:-1:exon
so has part: feature:988040-988099:-1:exon
so has part: feature:987284-987425:-1:exon
so has part: feature:986767-986918:-1:exon
so has part: feature:986206-986468:-1:exon
so has part: feature:985675-985800:-1:exon
so has part: feature:985407-985532:-1:exon
so has part: feature:985080-985280:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992208-992322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991985-992063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990914-991083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990293-990429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990058-990177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989802-989957:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989555-989678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989185-989247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:988040-988099:-1:exon

position:988040:-1
position: 988040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988099:-1
position: 988099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:987284-987425:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986767-986918:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:986206-986468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:985675-985800:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:985407-985532:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:985080-985280:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_032124455.1
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(985080..985280,985407..985532,985675..985800,986206..986468,989185..989247,989555..989678,989802..989957,990058..990177,990293..990429,990914..991083,991985..992063,992208..992321))
location: region:985080-992321:-1
so has part: feature:992208-992321:-1:exon
so has part: feature:991985-992063:-1:exon
so has part: feature:990914-991083:-1:exon
so has part: feature:990293-990429:-1:exon
so has part: feature:990058-990177:-1:exon
so has part: feature:989802-989957:-1:exon
so has part: feature:989555-989678:-1:exon
so has part: feature:989185-989247:-1:exon
so has part: feature:986206-986468:-1:exon
so has part: feature:985675-985800:-1:exon
so has part: feature:985407-985532:-1:exon
so has part: feature:985080-985280:-1:exon

position:992321:-1
position: 992321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992208-992321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991985-992063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990914-991083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990293-990429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990058-990177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989802-989957:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989555-989678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989185-989247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986206-986468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:985675-985800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:985407-985532:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:985080-985280:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X4
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGVGRDPRGLEPRGLEPRGLEPRVMEARALEARGLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(985410..985532,985675..985800,986206..986468,989555..989678,989802..989957,990058..990177,990293..990429,990914..991083,991985..992063,992208..992265))
location: region:985410-992265:-1
so has part: feature:992208-992265:-1:exon
so has part: feature:991985-992063:-1:exon
so has part: feature:990914-991083:-1:exon
so has part: feature:990293-990429:-1:exon
so has part: feature:990058-990177:-1:exon
so has part: feature:989802-989957:-1:exon
so has part: feature:989555-989678:-1:exon
so has part: feature:986206-986468:-1:exon
so has part: feature:985675-985800:-1:exon
so has part: feature:985410-985532:-1:exon

XP_031980347.1
type: Protein
SIO_000068: ncbiprotein

position:985410:-1
position: 985410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992265:-1
position: 992265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992208-992265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991985-992063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990914-991083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990293-990429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990058-990177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989802-989957:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989555-989678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986206-986468:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985675-985800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:985410-985532:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X3
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLERGQVGRDPRGLEPRGLEPRGLEPRVMEARALEARGLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(985410..985532,985675..985800,986206..986468,989185..989247,989555..989678,989802..989957,990058..990177,990293..990429,990914..991083,991985..992063,992208..992265))
location: region:985410-992265:-1
so has part: feature:992208-992265:-1:exon
so has part: feature:991985-992063:-1:exon
so has part: feature:990914-991083:-1:exon
so has part: feature:990293-990429:-1:exon
so has part: feature:990058-990177:-1:exon
so has part: feature:989802-989957:-1:exon
so has part: feature:989555-989678:-1:exon
so has part: feature:989185-989247:-1:exon
so has part: feature:986206-986468:-1:exon
so has part: feature:985675-985800:-1:exon
so has part: feature:985410-985532:-1:exon

XP_031980346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:992208-992265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991985-992063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990914-991083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990293-990429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990058-990177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989802-989957:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989555-989678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989185-989247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986206-986468:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:985675-985800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:985410-985532:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X2
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLERGQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPRVMEARALEARGLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(985410..985532,985675..985800,986206..986468,986767..986918,987284..987425,989185..989247,989555..989678,989802..989957,990058..990177,990293..990429,990914..991083,991985..992063,992208..992265))
location: region:985410-992265:-1
so has part: feature:992208-992265:-1:exon
so has part: feature:991985-992063:-1:exon
so has part: feature:990914-991083:-1:exon
so has part: feature:990293-990429:-1:exon
so has part: feature:990058-990177:-1:exon
so has part: feature:989802-989957:-1:exon
so has part: feature:989555-989678:-1:exon
so has part: feature:989185-989247:-1:exon
so has part: feature:987284-987425:-1:exon
so has part: feature:986767-986918:-1:exon
so has part: feature:986206-986468:-1:exon
so has part: feature:985675-985800:-1:exon
so has part: feature:985410-985532:-1:exon

XP_031980345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:992208-992265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991985-992063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990914-991083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990293-990429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990058-990177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989802-989957:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989555-989678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989185-989247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:987284-987425:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986767-986918:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986206-986468:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:985675-985800:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:985410-985532:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X1
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLERGQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPRVMEARALEARGLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(985410..985532,985675..985800,986206..986468,986767..986918,987284..987425,988040..988099,989185..989247,989555..989678,989802..989957,990058..990177,990293..990429,990914..991083,991985..992063,992208..992265))
location: region:985410-992265:-1
so has part: feature:992208-992265:-1:exon
so has part: feature:991985-992063:-1:exon
so has part: feature:990914-991083:-1:exon
so has part: feature:990293-990429:-1:exon
so has part: feature:990058-990177:-1:exon
so has part: feature:989802-989957:-1:exon
so has part: feature:989555-989678:-1:exon
so has part: feature:989185-989247:-1:exon
so has part: feature:988040-988099:-1:exon
so has part: feature:987284-987425:-1:exon
so has part: feature:986767-986918:-1:exon
so has part: feature:986206-986468:-1:exon
so has part: feature:985675-985800:-1:exon
so has part: feature:985410-985532:-1:exon

XP_031980344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:992208-992265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991985-992063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990914-991083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990293-990429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990058-990177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:989802-989957:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:989555-989678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:989185-989247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:988040-988099:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:987284-987425:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986767-986918:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:986206-986468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:985675-985800:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:985410-985532:-1:exon

TRMT12
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 992464..995403
location: region:992464-995403:1
so has part: feature:992464-995403:1:exon
subclass of: SO_0000010

116451245
type: Gene
SIO_000068: ncbigene

position:992464:1
position: 992464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995403:1
position: 995403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992464-995403:1:exon

TRMT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TRMT12
product: tRNA methyltransferase 12 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 135 samples with support for all annotated introns
transcript id: XM_032124457.1
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(992464..992634,992749..992896,992973..993582,994239..994396,994465..995403)
location: region:992464-995403:1
so has part: feature:992464-992634:1:exon
so has part: feature:992749-992896:1:exon
so has part: feature:992973-993582:1:exon
so has part: feature:994239-994396:1:exon
so has part: feature:994465-995403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992464-992634:1:exon

position:992634:1
position: 992634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:992749-992896:1:exon

position:992749:1
position: 992749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992896:1
position: 992896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:992973-993582:1:exon

position:992973:1
position: 992973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993582:1
position: 993582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:994239-994396:1:exon

position:994239:1
position: 994239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994396:1
position: 994396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:994465-995403:1:exon

position:994465:1
position: 994465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRMT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TRMT12
product: tRNA methyltransferase 12 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XM_032124458.1
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(992464..992634,992749..992896,992973..993162,993251..993401,993473..993582,994239..994396,994465..995403)
location: region:992464-995403:1
so has part: feature:992464-992634:1:exon
so has part: feature:992749-992896:1:exon
so has part: feature:992973-993162:1:exon
so has part: feature:993251-993401:1:exon
so has part: feature:993473-993582:1:exon
so has part: feature:994239-994396:1:exon
so has part: feature:994465-995403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992464-992634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992749-992896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:992973-993162:1:exon

position:993162:1
position: 993162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:993251-993401:1:exon

position:993251:1
position: 993251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993401:1
position: 993401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:993473-993582:1:exon

position:993473:1
position: 993473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:994239-994396:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:994465-995403:1:exon

TRMT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA wybutosine-synthesizing protein 2 homolog isoform X1
translation: MEATDVPMAVPGLATERRFAQRLRECLEEEQLLDGRYQLQQGPGRRVALPVLEEKLSQLRLPPEVPCERVWIQGPVPSRAARRRTPAQKLRDELRRLLGGTWSEELERDVPHAWQRHGDLVLLSEDSFQAAPWERLGEGEQGLPAPVLPAGLLPAFPSLPGRLRCRLGALGDGRRSFGGPAGGQARTGDAGWDADPQRNPAAGPGWLGGARGQRDQVGRSRRMRLVWEGTALTISAGSSRYTFDVTKCMFSPGNITEKLRVASLPCSGEVLVDLFAGIGYFTLPFLVHAGAAFVHACEWNSHAVEALHRTLVLNGVQDRCHIHAGDSRQLELRDVADRVNLGLIPSSEEGWPVACRILKKDTGGVLHIHHNVETPPAPAPPQAPALPAERGSPEATGSGGEAQHPTEDGGKEMPGARLRPEWQRWAEATATRIQGLLAELHGRPWRTSILHIEAVKSYAPHVHHLVLDLECRPVVPV
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(992564..992634,992749..992896,992973..993582,994239..994396,994465..994911)
location: region:992564-994911:1
so has part: feature:992564-992634:1:exon
so has part: feature:992749-992896:1:exon
so has part: feature:992973-993582:1:exon
so has part: feature:994239-994396:1:exon
so has part: feature:994465-994911:1:exon

XP_031980348.1
type: Protein
SIO_000068: ncbiprotein

position:992564:1
position: 992564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994911:1
position: 994911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992564-992634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992749-992896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:992973-993582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994239-994396:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994465-994911:1:exon

TRMT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA wybutosine-synthesizing protein 2 homolog isoform X2
translation: MEATDVPMAVPGLATERRFAQRLRECLEEEQLLDGRYQLQQGPGRRVALPVLEEKLSQLRLPPEVPCERVWIQGPVPSRAARRRTPAQKLRDELRRLLGGTWSEELERDVPHAWQRHGDLVLLSEDSFQAAPWERLGSALWETVAAALGARRVARRGRVMPDGMRTPSVTLLLGQDGWVEHVDNGIRYTFDVTKCMFSPGNITEKLRVASLPCSGEVLVDLFAGIGYFTLPFLVHAGAAFVHACEWNSHAVEALHRTLVLNGVQDRCHIHAGDSRQLELRDVADRVNLGLIPSSEEGWPVACRILKKDTGGVLHIHHNVETPPAPAPPQAPALPAERGSPEATGSGGEAQHPTEDGGKEMPGARLRPEWQRWAEATATRIQGLLAELHGRPWRTSILHIEAVKSYAPHVHHLVLDLECRPVVPV
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(992564..992634,992749..992896,992973..993162,993251..993401,993473..993582,994239..994396,994465..994911)
location: region:992564-994911:1
so has part: feature:992564-992634:1:exon
so has part: feature:992749-992896:1:exon
so has part: feature:992973-993162:1:exon
so has part: feature:993251-993401:1:exon
so has part: feature:993473-993582:1:exon
so has part: feature:994239-994396:1:exon
so has part: feature:994465-994911:1:exon

XP_031980349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:992564-992634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992749-992896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:992973-993162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:993251-993401:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:993473-993582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:994239-994396:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:994465-994911:1:exon

SYTL4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 995502..1003465
location: region:995502-1003465:1
so has part: feature:995502-1003465:1:exon
subclass of: SO_0000010

116451243
type: Gene
SIO_000068: ncbigene

position:995502:1
position: 995502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003465:1
position: 1003465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995502-1003465:1:exon

SYTL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SYTL4
product: synaptotagmin like 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_032124450.1
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(995502..995994,997060..997207,997348..997563,998083..998192,998354..998468,998630..998737,998990..999104,999212..999302,999493..999596,999706..999792,1000147..1000325,1000516..1000618,1001455..1001616,1002047..1002152,1002544..1002643,1002883..1003091,1003199..1003465)
location: region:995502-1003465:1
so has part: feature:995502-995994:1:exon
so has part: feature:997060-997207:1:exon
so has part: feature:997348-997563:1:exon
so has part: feature:998083-998192:1:exon
so has part: feature:998354-998468:1:exon
so has part: feature:998630-998737:1:exon
so has part: feature:998990-999104:1:exon
so has part: feature:999212-999302:1:exon
so has part: feature:999493-999596:1:exon
so has part: feature:999706-999792:1:exon
so has part: feature:1000147-1000325:1:exon
so has part: feature:1000516-1000618:1:exon
so has part: feature:1001455-1001616:1:exon
so has part: feature:1002047-1002152:1:exon
so has part: feature:1002544-1002643:1:exon
so has part: feature:1002883-1003091:1:exon
so has part: feature:1003199-1003465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995502-995994:1:exon

position:995994:1
position: 995994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:997060-997207:1:exon

position:997060:1
position: 997060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997207:1
position: 997207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:997348-997563:1:exon

position:997348:1
position: 997348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997563:1
position: 997563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:998083-998192:1:exon

position:998083:1
position: 998083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998192:1
position: 998192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:998354-998468:1:exon

position:998354:1
position: 998354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998468:1
position: 998468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:998630-998737:1:exon

position:998630:1
position: 998630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998737:1
position: 998737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:998990-999104:1:exon

position:998990:1
position: 998990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999104:1
position: 999104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:999212-999302:1:exon

position:999212:1
position: 999212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999302:1
position: 999302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:999493-999596:1:exon

position:999493:1
position: 999493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999596:1
position: 999596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:999706-999792:1:exon

position:999706:1
position: 999706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999792:1
position: 999792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1000147-1000325:1:exon

position:1000147:1
position: 1000147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000325:1
position: 1000325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1000516-1000618:1:exon

position:1000516:1
position: 1000516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000618:1
position: 1000618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1001455-1001616:1:exon

position:1001455:1
position: 1001455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001616:1
position: 1001616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1002047-1002152:1:exon

position:1002047:1
position: 1002047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002152:1
position: 1002152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1002544-1002643:1:exon

position:1002544:1
position: 1002544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002643:1
position: 1002643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1002883-1003091:1:exon

position:1002883:1
position: 1002883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003091:1
position: 1003091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1003199-1003465:1:exon

position:1003199:1
position: 1003199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYTL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SYTL4
product: synaptotagmin like 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 101 samples with support for all annotated introns
transcript id: XM_032124449.1
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(996057..996280,997060..997207,997348..997563,998083..998192,998354..998468,998630..998737,998990..999104,999212..999302,999493..999596,999706..999792,1000147..1000325,1000516..1000618,1001455..1001616,1002047..1002152,1002544..1002643,1002883..1003091,1003199..1003465)
location: region:996057-1003465:1
so has part: feature:996057-996280:1:exon
so has part: feature:997060-997207:1:exon
so has part: feature:997348-997563:1:exon
so has part: feature:998083-998192:1:exon
so has part: feature:998354-998468:1:exon
so has part: feature:998630-998737:1:exon
so has part: feature:998990-999104:1:exon
so has part: feature:999212-999302:1:exon
so has part: feature:999493-999596:1:exon
so has part: feature:999706-999792:1:exon
so has part: feature:1000147-1000325:1:exon
so has part: feature:1000516-1000618:1:exon
so has part: feature:1001455-1001616:1:exon
so has part: feature:1002047-1002152:1:exon
so has part: feature:1002544-1002643:1:exon
so has part: feature:1002883-1003091:1:exon
so has part: feature:1003199-1003465:1:exon

position:996057:1
position: 996057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996057-996280:1:exon

position:996280:1
position: 996280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:997060-997207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:997348-997563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998083-998192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998354-998468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:998630-998737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:998990-999104:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:999212-999302:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:999493-999596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:999706-999792:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1000147-1000325:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1000516-1000618:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1001455-1001616:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1002047-1002152:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1002544-1002643:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1002883-1003091:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1003199-1003465:1:exon

SYTL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SYTL4
product: synaptotagmin like 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032124451.1
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(996949..997207,997348..997563,998083..998192,998354..998468,998630..998737,998990..999104,999212..999302,999493..999596,999706..999792,1000147..1000325,1000516..1000618,1001455..1001616,1002047..1002152,1002393..1002537)
location: region:996949-1002537:1
so has part: feature:996949-997207:1:exon
so has part: feature:997348-997563:1:exon
so has part: feature:998083-998192:1:exon
so has part: feature:998354-998468:1:exon
so has part: feature:998630-998737:1:exon
so has part: feature:998990-999104:1:exon
so has part: feature:999212-999302:1:exon
so has part: feature:999493-999596:1:exon
so has part: feature:999706-999792:1:exon
so has part: feature:1000147-1000325:1:exon
so has part: feature:1000516-1000618:1:exon
so has part: feature:1001455-1001616:1:exon
so has part: feature:1002047-1002152:1:exon
so has part: feature:1002393-1002537:1:exon

position:996949:1
position: 996949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002537:1
position: 1002537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996949-997207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:997348-997563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998083-998192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998354-998468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998630-998737:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:998990-999104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999212-999302:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:999493-999596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:999706-999792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1000147-1000325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1000516-1000618:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1001455-1001616:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1002047-1002152:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1002393-1002537:1:exon

position:1002393:1
position: 1002393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYTL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 4 isoform X1
translation: MSEAVDLSFLSDVERDLILQVLQRDEELRKAEERRIRRLKNELLEIRRKGAKRGSQRYSERTCARCQQSLGRVSPKANTCRGCNHLVCRDCRSYSPNDSWRCKVCTKEAELKKTTGDWFYDQRVNRFANHLGSDMVRLSLRHKPTANKRETVGQTLLQKAQLSEPKSSSAVRQPSPPAPREGSSLFPDASDPRDGKSDTESMENMSLDGYRPSPADVGGRRNSLERAVPGKQVAAPAGPASSSLTLPLRSKTAFSDGRDVTVGTRSSTLVDEHETIFKKNPRRVVRPADYTKSVIDLRPEDLVGEGGSLGDRSKSVPGLNTELEEEEEDIDNLVEIHRQRVARGSMRSGTSSSTLGSMVSIYSEAGDFGSVAVTGGISFSLSYEQKTQTLFIHVKECRQLAYGDEGRKRSNPYVKTYLLPDKSRQGKRKTTIKRNTINPLYNELLKYEINKSLLLARTLQFSVWHHDRFGRNTFLGEVEVPLDAWNFESHLEEFLPLHGKIGADAAGLHQYKGELVVSMKYIPSAKHPGAGNGRKGKTGDGGELQVWIKEAKNLTAAKSGGTSDSFVKGYLLPHKNKASKRKTPVVKKTLNPHYNHTFVYNGINPEDLQHICLELTVWDREPLSSNDFLGGVRLGVGNGMSNGQAVDWMDSTGEELNLWQKMCQYPGSWAEGTLQLRSTMAKLRP
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(997098..997207,997348..997563,998083..998192,998354..998468,998630..998737,998990..999104,999212..999302,999493..999596,999706..999792,1000147..1000325,1000516..1000618,1001455..1001616,1002047..1002152,1002544..1002643,1002883..1003091,1003199..1003341)
location: region:997098-1003341:1
so has part: feature:997098-997207:1:exon
so has part: feature:997348-997563:1:exon
so has part: feature:998083-998192:1:exon
so has part: feature:998354-998468:1:exon
so has part: feature:998630-998737:1:exon
so has part: feature:998990-999104:1:exon
so has part: feature:999212-999302:1:exon
so has part: feature:999493-999596:1:exon
so has part: feature:999706-999792:1:exon
so has part: feature:1000147-1000325:1:exon
so has part: feature:1000516-1000618:1:exon
so has part: feature:1001455-1001616:1:exon
so has part: feature:1002047-1002152:1:exon
so has part: feature:1002544-1002643:1:exon
so has part: feature:1002883-1003091:1:exon
so has part: feature:1003199-1003341:1:exon

XP_031980340.1
type: Protein
SIO_000068: ncbiprotein

position:997098:1
position: 997098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003341:1
position: 1003341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997098-997207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:997348-997563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998083-998192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998354-998468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998630-998737:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:998990-999104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999212-999302:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:999493-999596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:999706-999792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1000147-1000325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1000516-1000618:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1001455-1001616:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1002047-1002152:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1002544-1002643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1002883-1003091:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1003199-1003341:1:exon

SYTL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 4 isoform X1
translation: MSEAVDLSFLSDVERDLILQVLQRDEELRKAEERRIRRLKNELLEIRRKGAKRGSQRYSERTCARCQQSLGRVSPKANTCRGCNHLVCRDCRSYSPNDSWRCKVCTKEAELKKTTGDWFYDQRVNRFANHLGSDMVRLSLRHKPTANKRETVGQTLLQKAQLSEPKSSSAVRQPSPPAPREGSSLFPDASDPRDGKSDTESMENMSLDGYRPSPADVGGRRNSLERAVPGKQVAAPAGPASSSLTLPLRSKTAFSDGRDVTVGTRSSTLVDEHETIFKKNPRRVVRPADYTKSVIDLRPEDLVGEGGSLGDRSKSVPGLNTELEEEEEDIDNLVEIHRQRVARGSMRSGTSSSTLGSMVSIYSEAGDFGSVAVTGGISFSLSYEQKTQTLFIHVKECRQLAYGDEGRKRSNPYVKTYLLPDKSRQGKRKTTIKRNTINPLYNELLKYEINKSLLLARTLQFSVWHHDRFGRNTFLGEVEVPLDAWNFESHLEEFLPLHGKIGADAAGLHQYKGELVVSMKYIPSAKHPGAGNGRKGKTGDGGELQVWIKEAKNLTAAKSGGTSDSFVKGYLLPHKNKASKRKTPVVKKTLNPHYNHTFVYNGINPEDLQHICLELTVWDREPLSSNDFLGGVRLGVGNGMSNGQAVDWMDSTGEELNLWQKMCQYPGSWAEGTLQLRSTMAKLRP
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(997098..997207,997348..997563,998083..998192,998354..998468,998630..998737,998990..999104,999212..999302,999493..999596,999706..999792,1000147..1000325,1000516..1000618,1001455..1001616,1002047..1002152,1002544..1002643,1002883..1003091,1003199..1003341)
location: region:997098-1003341:1
so has part: feature:997098-997207:1:exon
so has part: feature:997348-997563:1:exon
so has part: feature:998083-998192:1:exon
so has part: feature:998354-998468:1:exon
so has part: feature:998630-998737:1:exon
so has part: feature:998990-999104:1:exon
so has part: feature:999212-999302:1:exon
so has part: feature:999493-999596:1:exon
so has part: feature:999706-999792:1:exon
so has part: feature:1000147-1000325:1:exon
so has part: feature:1000516-1000618:1:exon
so has part: feature:1001455-1001616:1:exon
so has part: feature:1002047-1002152:1:exon
so has part: feature:1002544-1002643:1:exon
so has part: feature:1002883-1003091:1:exon
so has part: feature:1003199-1003341:1:exon

XP_031980341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:997098-997207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:997348-997563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998083-998192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998354-998468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998630-998737:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:998990-999104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999212-999302:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:999493-999596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:999706-999792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1000147-1000325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1000516-1000618:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1001455-1001616:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1002047-1002152:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1002544-1002643:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1002883-1003091:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1003199-1003341:1:exon

SYTL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 4 isoform X2
translation: MSEAVDLSFLSDVERDLILQVLQRDEELRKAEERRIRRLKNELLEIRRKGAKRGSQRYSERTCARCQQSLGRVSPKANTCRGCNHLVCRDCRSYSPNDSWRCKVCTKEAELKKTTGDWFYDQRVNRFANHLGSDMVRLSLRHKPTANKRETVGQTLLQKAQLSEPKSSSAVRQPSPPAPREGSSLFPDASDPRDGKSDTESMENMSLDGYRPSPADVGGRRNSLERAVPGKQVAAPAGPASSSLTLPLRSKTAFSDGRDVTVGTRSSTLVDEHETIFKKNPRRVVRPADYTKSVIDLRPEDLVGEGGSLGDRSKSVPGLNTELEEEEEDIDNLVEIHRQRVARGSMRSGTSSSTLGSMVSIYSEAGDFGSVAVTGGISFSLSYEQKTQTLFIHVKECRQLAYGDEGRKRSNPYVKTYLLPDKSRQGKRKTTIKRNTINPLYNELLKYEINKSLLLARTLQFSVWHHDRFGRNTFLGEVEVPLDAWNFESHLEEFLPLHGKIGADAAGLHQYKGELVVSMKYIPSAKHPGAGNGRKGRASTGEGKRRCQPGLCTCLWDEECSAGPFQKFTVVEIKFD
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(997098..997207,997348..997563,998083..998192,998354..998468,998630..998737,998990..999104,999212..999302,999493..999596,999706..999792,1000147..1000325,1000516..1000618,1001455..1001616,1002047..1002152,1002393..1002517)
location: region:997098-1002517:1
so has part: feature:997098-997207:1:exon
so has part: feature:997348-997563:1:exon
so has part: feature:998083-998192:1:exon
so has part: feature:998354-998468:1:exon
so has part: feature:998630-998737:1:exon
so has part: feature:998990-999104:1:exon
so has part: feature:999212-999302:1:exon
so has part: feature:999493-999596:1:exon
so has part: feature:999706-999792:1:exon
so has part: feature:1000147-1000325:1:exon
so has part: feature:1000516-1000618:1:exon
so has part: feature:1001455-1001616:1:exon
so has part: feature:1002047-1002152:1:exon
so has part: feature:1002393-1002517:1:exon

XP_031980342.1
type: Protein
SIO_000068: ncbiprotein

position:1002517:1
position: 1002517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997098-997207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:997348-997563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998083-998192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998354-998468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998630-998737:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:998990-999104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:999212-999302:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:999493-999596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:999706-999792:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1000147-1000325:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1000516-1000618:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1001455-1001616:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1002047-1002152:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1002393-1002517:1:exon

SRPX2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1003806..1009347)
location: region:1003806-1009347:-1
so has part: feature:1003806-1009347:-1:exon
subclass of: SO_0000010

116451162
type: Gene
SIO_000068: ncbigene

position:1003806:-1
position: 1003806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009347:-1
position: 1009347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003806-1009347:-1:exon

SRPX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SRPX2
product: sushi repeat containing protein X-linked 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032124326.1
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(1003806..1004601,1004923..1005044,1005119..1005252,1005382..1005561,1005675..1005796,1005898..1006024,1006348..1006524,1006651..1006842,1006929..1007012,1008719..1008848,1008964..1009347))
location: region:1003806-1009347:-1
so has part: feature:1008964-1009347:-1:exon
so has part: feature:1008719-1008848:-1:exon
so has part: feature:1006929-1007012:-1:exon
so has part: feature:1006651-1006842:-1:exon
so has part: feature:1006348-1006524:-1:exon
so has part: feature:1005898-1006024:-1:exon
so has part: feature:1005675-1005796:-1:exon
so has part: feature:1005382-1005561:-1:exon
so has part: feature:1005119-1005252:-1:exon
so has part: feature:1004923-1005044:-1:exon
so has part: feature:1003806-1004601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1008964-1009347:-1:exon

position:1008964:-1
position: 1008964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1008719-1008848:-1:exon

position:1008719:-1
position: 1008719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008848:-1
position: 1008848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1006929-1007012:-1:exon

position:1006929:-1
position: 1006929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007012:-1
position: 1007012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1006651-1006842:-1:exon

position:1006651:-1
position: 1006651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006842:-1
position: 1006842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1006348-1006524:-1:exon

position:1006348:-1
position: 1006348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006524:-1
position: 1006524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1005898-1006024:-1:exon

position:1005898:-1
position: 1005898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1006024:-1
position: 1006024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1005675-1005796:-1:exon

position:1005675:-1
position: 1005675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005796:-1
position: 1005796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1005382-1005561:-1:exon

position:1005382:-1
position: 1005382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005561:-1
position: 1005561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1005119-1005252:-1:exon

position:1005119:-1
position: 1005119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005252:-1
position: 1005252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1004923-1005044:-1:exon

position:1004923:-1
position: 1004923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005044:-1
position: 1005044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1003806-1004601:-1:exon

position:1004601:-1
position: 1004601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRPX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SRPX2
product: sushi repeat containing protein X-linked 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_032124325.1
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(1003806..1004601,1004923..1005044,1005119..1005252,1005382..1005561,1005675..1005796,1005898..1006024,1006348..1006524,1006651..1006842,1006929..1007012,1008719..1009347))
location: region:1003806-1009347:-1
so has part: feature:1008719-1009347:-1:exon
so has part: feature:1006929-1007012:-1:exon
so has part: feature:1006651-1006842:-1:exon
so has part: feature:1006348-1006524:-1:exon
so has part: feature:1005898-1006024:-1:exon
so has part: feature:1005675-1005796:-1:exon
so has part: feature:1005382-1005561:-1:exon
so has part: feature:1005119-1005252:-1:exon
so has part: feature:1004923-1005044:-1:exon
so has part: feature:1003806-1004601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1008719-1009347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1006929-1007012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1006651-1006842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1006348-1006524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005898-1006024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005675-1005796:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005382-1005561:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005119-1005252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004923-1005044:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003806-1004601:-1:exon

SRPX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: SRPX2
product: sushi repeat containing protein X-linked 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032124324.1
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(1003806..1004601,1004923..1005044,1005119..1005252,1005382..1005561,1005675..1005796,1005898..1006024,1006348..1006524,1006651..1006842,1006929..1007012,1007381..1007659))
location: region:1003806-1007659:-1
so has part: feature:1007381-1007659:-1:exon
so has part: feature:1006929-1007012:-1:exon
so has part: feature:1006651-1006842:-1:exon
so has part: feature:1006348-1006524:-1:exon
so has part: feature:1005898-1006024:-1:exon
so has part: feature:1005675-1005796:-1:exon
so has part: feature:1005382-1005561:-1:exon
so has part: feature:1005119-1005252:-1:exon
so has part: feature:1004923-1005044:-1:exon
so has part: feature:1003806-1004601:-1:exon

position:1007659:-1
position: 1007659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007381-1007659:-1:exon

position:1007381:-1
position: 1007381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1006929-1007012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1006651-1006842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1006348-1006524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005898-1006024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005675-1005796:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005382-1005561:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005119-1005252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004923-1005044:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003806-1004601:-1:exon

SRPX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi repeat-containing protein SRPX2 isoform X2
translation: MAQEAAPILLVVLARLVSSTWHEGSGYYLESHTNEVYAEEPPPEPALDYRRVPQWCATLNIHRGEATCYSPRGSSYRSSLGTRCELSCTRGYRLVGPSAVQCLPSRHWSGMAYCRQIRCHVLPAVLRGSYVCSAGVQMDSRCDYTCLPGYQLEGDRSRVCMEDGHWSGSEPICVDMEPPKIRCPDSRQRIAEPGKLTATVYWDPPRVRDSADGVIKRVMLRGPEPGSEFPEGEHVIRYTAHDQAYNRASCKFSIRVQVRRCPVLKPPQNGYISCTSDGNNYGATCEYLCDGGYERQGTSLRVCQSTQQWTGSQPLCAPMQINTDVNSAASLLDQFHEKRRLFVISAPDPSNRYYKMQISMLQQAACGLDLRHVTTVELVGQPPHEVGRIREHRLSLGIIEELRRFLHLTRSHFNAVLLDKAGTDRERYISPVSPDELFVFIDTYLLSEREAARRAQSGDPCE
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(1004421..1004601,1004923..1005044,1005119..1005252,1005382..1005561,1005675..1005796,1005898..1006024,1006348..1006524,1006651..1006842,1006929..1007012,1008719..1008788))
location: region:1004421-1008788:-1
so has part: feature:1008719-1008788:-1:exon
so has part: feature:1006929-1007012:-1:exon
so has part: feature:1006651-1006842:-1:exon
so has part: feature:1006348-1006524:-1:exon
so has part: feature:1005898-1006024:-1:exon
so has part: feature:1005675-1005796:-1:exon
so has part: feature:1005382-1005561:-1:exon
so has part: feature:1005119-1005252:-1:exon
so has part: feature:1004923-1005044:-1:exon
so has part: feature:1004421-1004601:-1:exon

XP_031980216.1
type: Protein
SIO_000068: ncbiprotein

position:1004421:-1
position: 1004421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008788:-1
position: 1008788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1008719-1008788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1006929-1007012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1006651-1006842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1006348-1006524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005898-1006024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005675-1005796:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005382-1005561:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005119-1005252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004923-1005044:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1004421-1004601:-1:exon

SRPX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi repeat-containing protein SRPX2 isoform X2
translation: MAQEAAPILLVVLARLVSSTWHEGSGYYLESHTNEVYAEEPPPEPALDYRRVPQWCATLNIHRGEATCYSPRGSSYRSSLGTRCELSCTRGYRLVGPSAVQCLPSRHWSGMAYCRQIRCHVLPAVLRGSYVCSAGVQMDSRCDYTCLPGYQLEGDRSRVCMEDGHWSGSEPICVDMEPPKIRCPDSRQRIAEPGKLTATVYWDPPRVRDSADGVIKRVMLRGPEPGSEFPEGEHVIRYTAHDQAYNRASCKFSIRVQVRRCPVLKPPQNGYISCTSDGNNYGATCEYLCDGGYERQGTSLRVCQSTQQWTGSQPLCAPMQINTDVNSAASLLDQFHEKRRLFVISAPDPSNRYYKMQISMLQQAACGLDLRHVTTVELVGQPPHEVGRIREHRLSLGIIEELRRFLHLTRSHFNAVLLDKAGTDRERYISPVSPDELFVFIDTYLLSEREAARRAQSGDPCE
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(1004421..1004601,1004923..1005044,1005119..1005252,1005382..1005561,1005675..1005796,1005898..1006024,1006348..1006524,1006651..1006842,1006929..1007012,1008719..1008788))
location: region:1004421-1008788:-1
so has part: feature:1008719-1008788:-1:exon
so has part: feature:1006929-1007012:-1:exon
so has part: feature:1006651-1006842:-1:exon
so has part: feature:1006348-1006524:-1:exon
so has part: feature:1005898-1006024:-1:exon
so has part: feature:1005675-1005796:-1:exon
so has part: feature:1005382-1005561:-1:exon
so has part: feature:1005119-1005252:-1:exon
so has part: feature:1004923-1005044:-1:exon
so has part: feature:1004421-1004601:-1:exon

XP_031980217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1008719-1008788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1006929-1007012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1006651-1006842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1006348-1006524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005898-1006024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005675-1005796:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005382-1005561:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005119-1005252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004923-1005044:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1004421-1004601:-1:exon

SRPX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi repeat-containing protein SRPX2 isoform X1
translation: MKARCAPGGGPQGWRRAVLAPSVGPLCAARVAWGQRLRPSPFSSFILPWSTGKRLHPHQPRPGSVLTIPFLGSGYYLESHTNEVYAEEPPPEPALDYRRVPQWCATLNIHRGEATCYSPRGSSYRSSLGTRCELSCTRGYRLVGPSAVQCLPSRHWSGMAYCRQIRCHVLPAVLRGSYVCSAGVQMDSRCDYTCLPGYQLEGDRSRVCMEDGHWSGSEPICVDMEPPKIRCPDSRQRIAEPGKLTATVYWDPPRVRDSADGVIKRVMLRGPEPGSEFPEGEHVIRYTAHDQAYNRASCKFSIRVQVRRCPVLKPPQNGYISCTSDGNNYGATCEYLCDGGYERQGTSLRVCQSTQQWTGSQPLCAPMQINTDVNSAASLLDQFHEKRRLFVISAPDPSNRYYKMQISMLQQAACGLDLRHVTTVELVGQPPHEVGRIREHRLSLGIIEELRRFLHLTRSHFNAVLLDKAGTDRERYISPVSPDELFVFIDTYLLSEREAARRAQSGDPCE
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(1004421..1004601,1004923..1005044,1005119..1005252,1005382..1005561,1005675..1005796,1005898..1006024,1006348..1006524,1006651..1006842,1006929..1007012,1007381..1007594))
location: region:1004421-1007594:-1
so has part: feature:1007381-1007594:-1:exon
so has part: feature:1006929-1007012:-1:exon
so has part: feature:1006651-1006842:-1:exon
so has part: feature:1006348-1006524:-1:exon
so has part: feature:1005898-1006024:-1:exon
so has part: feature:1005675-1005796:-1:exon
so has part: feature:1005382-1005561:-1:exon
so has part: feature:1005119-1005252:-1:exon
so has part: feature:1004923-1005044:-1:exon
so has part: feature:1004421-1004601:-1:exon

XP_031980215.1
type: Protein
SIO_000068: ncbiprotein

position:1007594:-1
position: 1007594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007381-1007594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1006929-1007012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1006651-1006842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1006348-1006524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005898-1006024:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005675-1005796:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005382-1005561:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1005119-1005252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004923-1005044:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1004421-1004601:-1:exon

TSPAN6
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1010647..1015816
location: region:1010647-1015816:1
so has part: feature:1010647-1015816:1:exon
subclass of: SO_0000010

116451080
type: Gene
SIO_000068: ncbigene

position:1010647:1
position: 1010647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015816:1
position: 1015816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010647-1015816:1:exon

TSPAN6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TSPAN6
product: tetraspanin 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_032124217.1
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(1010647..1010789,1010882..1011070,1011894..1011992,1012217..1012372,1013038..1013121,1014821..1014920,1015103..1015816)
location: region:1010647-1015816:1
so has part: feature:1010647-1010789:1:exon
so has part: feature:1010882-1011070:1:exon
so has part: feature:1011894-1011992:1:exon
so has part: feature:1012217-1012372:1:exon
so has part: feature:1013038-1013121:1:exon
so has part: feature:1014821-1014920:1:exon
so has part: feature:1015103-1015816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010647-1010789:1:exon

position:1010789:1
position: 1010789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1010882-1011070:1:exon

position:1010882:1
position: 1010882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011070:1
position: 1011070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1011894-1011992:1:exon

position:1011894:1
position: 1011894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011992:1
position: 1011992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1012217-1012372:1:exon

position:1012217:1
position: 1012217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012372:1
position: 1012372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1013038-1013121:1:exon

position:1013038:1
position: 1013038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013121:1
position: 1013121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1014821-1014920:1:exon

position:1014821:1
position: 1014821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014920:1
position: 1014920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1015103-1015816:1:exon

position:1015103:1
position: 1015103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TSPAN6
product: tetraspanin 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_032124216.1
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(1010648..1010789,1010882..1011070,1011243..1011317,1011894..1011992,1012217..1012372,1013038..1013121,1014821..1014920,1015103..1015816)
location: region:1010648-1015816:1
so has part: feature:1010648-1010789:1:exon
so has part: feature:1010882-1011070:1:exon
so has part: feature:1011243-1011317:1:exon
so has part: feature:1011894-1011992:1:exon
so has part: feature:1012217-1012372:1:exon
so has part: feature:1013038-1013121:1:exon
so has part: feature:1014821-1014920:1:exon
so has part: feature:1015103-1015816:1:exon

position:1010648:1
position: 1010648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010648-1010789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1010882-1011070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011243-1011317:1:exon

position:1011243:1
position: 1011243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011317:1
position: 1011317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1011894-1011992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1012217-1012372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1013038-1013121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1014821-1014920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1015103-1015816:1:exon

TSPAN6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-6 isoform X1
translation: MASPSRRLQTKPVITCLKSVLLTYTFVFWVSGIVLLAVGIWGRVSLAVYFSLLDEKATNVPFVLVGAGTVVVLLGTFGCFATCRGSTWMLKLYAMLLSLIFLIVLVAAIVGFVFRHEIKTNFESNLNLALEDYNVTADRHSEAVDTIQRTLHCCGVQNYSDWERTEYFSQRGIPRSCCKNQNDCSEEDLKDPNKAKLKVFVDGCFFLVTSTMESKMSVVAGISFGIACFQLIGIILSCCLSRYITNNQYEMV
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(1010703..1010789,1010882..1011070,1011243..1011317,1011894..1011992,1012217..1012372,1013038..1013121,1014821..1014889)
location: region:1010703-1014889:1
so has part: feature:1010703-1010789:1:exon
so has part: feature:1010882-1011070:1:exon
so has part: feature:1011243-1011317:1:exon
so has part: feature:1011894-1011992:1:exon
so has part: feature:1012217-1012372:1:exon
so has part: feature:1013038-1013121:1:exon
so has part: feature:1014821-1014889:1:exon

XP_031980107.1
type: Protein
SIO_000068: ncbiprotein

position:1010703:1
position: 1010703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014889:1
position: 1014889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010703-1010789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1010882-1011070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011243-1011317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1011894-1011992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1012217-1012372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1013038-1013121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1014821-1014889:1:exon

TSPAN6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-6 isoform X2
translation: MASPSRRLQTKPVITCLKSVLLTYTFVFWVSGIVLLAVGIWGRVSLAVYFSLLDEKATNVPFVLVGAGTVVVLLGTFGCFATCRGSTWMLKLIKTNFESNLNLALEDYNVTADRHSEAVDTIQRTLHCCGVQNYSDWERTEYFSQRGIPRSCCKNQNDCSEEDLKDPNKAKLKVFVDGCFFLVTSTMESKMSVVAGISFGIACFQLIGIILSCCLSRYITNNQYEMV
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(1010703..1010789,1010882..1011070,1011894..1011992,1012217..1012372,1013038..1013121,1014821..1014889)
location: region:1010703-1014889:1
so has part: feature:1010703-1010789:1:exon
so has part: feature:1010882-1011070:1:exon
so has part: feature:1011894-1011992:1:exon
so has part: feature:1012217-1012372:1:exon
so has part: feature:1013038-1013121:1:exon
so has part: feature:1014821-1014889:1:exon

XP_031980108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1010703-1010789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1010882-1011070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011894-1011992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1012217-1012372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1013038-1013121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014821-1014889:1:exon

TNMD
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: TNMD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1018224..1027202)
location: region:1018224-1027202:-1
so has part: feature:1018224-1027202:-1:exon
subclass of: SO_0000010

116451170
type: Gene
SIO_000068: ncbigene

position:1018224:-1
position: 1018224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027202:-1
position: 1027202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018224-1027202:-1:exon

TNMD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: TNMD
product: tenomodulin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_032124329.1
SIO_010081: TNMD
subclass of: SO_0000673
so part of: TNMD
location: complement(join(1018224..1018679,1018952..1019124,1020358..1020511,1022345..1022446,1023241..1023381,1026617..1026751,1026878..1027202))
location: region:1018224-1027202:-1
so has part: feature:1026878-1027202:-1:exon
so has part: feature:1026617-1026751:-1:exon
so has part: feature:1023241-1023381:-1:exon
so has part: feature:1022345-1022446:-1:exon
so has part: feature:1020358-1020511:-1:exon
so has part: feature:1018952-1019124:-1:exon
so has part: feature:1018224-1018679:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1026878-1027202:-1:exon

position:1026878:-1
position: 1026878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1026617-1026751:-1:exon

position:1026617:-1
position: 1026617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026751:-1
position: 1026751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1023241-1023381:-1:exon

position:1023241:-1
position: 1023241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023381:-1
position: 1023381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1022345-1022446:-1:exon

position:1022345:-1
position: 1022345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022446:-1
position: 1022446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1020358-1020511:-1:exon

position:1020358:-1
position: 1020358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020511:-1
position: 1020511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1018952-1019124:-1:exon

position:1018952:-1
position: 1018952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019124:-1
position: 1019124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1018224-1018679:-1:exon

position:1018679:-1
position: 1018679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNMD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: TNMD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenomodulin
translation: MTREAGPRTRLAATAPWGSACPAAWGWPERCGQERCGSAGPRGLRGELAAPPRGWPWPSLPTACAARASLTPPRSGLASSHTEETMGETARQSPQDCRFLDADAAKPRKKICPRYQLCGLLFSALLLSLILIFFGVKYLWNPAPRKVYDMEHTFFSNGEKKKIVMEIDPLARTETFSSGNGSEEILEIHDFKNGITGIFFVGLQKCFIKTQTKVLPETTEAKIPELEGEEITTTYFEQSVVWVPGEKPIQNKEFLKSSKIFDICKNVTIFWIHPTPIAAPELANLEGAEEEDPELLTDSQSWLDGGSEHELEKDMQAGPKRRARQLTEEDLPVNDYSENGLEFHPLWDERGYCCAQCRRANRYCRRVCEPLLGYYPYPYCYQGGRVICRIIMPCNWWIARMLGRV
SIO_010081: TNMD
subclass of: SO_0000673
so part of: TNMD
location: complement(join(1018470..1018679,1018952..1019124,1020358..1020511,1022345..1022446,1023241..1023381,1026617..1026751,1026878..1027180))
location: region:1018470-1027180:-1
so has part: feature:1026878-1027180:-1:exon
so has part: feature:1026617-1026751:-1:exon
so has part: feature:1023241-1023381:-1:exon
so has part: feature:1022345-1022446:-1:exon
so has part: feature:1020358-1020511:-1:exon
so has part: feature:1018952-1019124:-1:exon
so has part: feature:1018470-1018679:-1:exon

XP_031980220.1
type: Protein
SIO_000068: ncbiprotein

position:1018470:-1
position: 1018470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027180:-1
position: 1027180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026878-1027180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1026617-1026751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023241-1023381:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022345-1022446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1020358-1020511:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1018952-1019124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1018470-1018679:-1:exon

PCDH19
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1052471..1110928
location: region:1052471-1110928:1
so has part: feature:1052471-1110928:1:exon
subclass of: SO_0000010

116450894
type: Gene
SIO_000068: ncbigene

position:1052471:1
position: 1052471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110928:1
position: 1110928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052471-1110928:1:exon

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PCDH19
product: protocadherin 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_032123832.1
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(1052471..1054934,1057908..1058235,1074601..1079514)
location: region:1052471-1079514:1
so has part: feature:1052471-1054934:1:exon
so has part: feature:1057908-1058235:1:exon
so has part: feature:1074601-1079514:1:exon

position:1079514:1
position: 1079514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052471-1054934:1:exon

position:1054934:1
position: 1054934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057908-1058235:1:exon

position:1057908:1
position: 1057908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058235:1
position: 1058235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1074601-1079514:1:exon

position:1074601:1
position: 1074601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PCDH19
product: protocadherin 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_032123830.1
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(1052473..1054934,1057908..1058235,1079525..1079583,1082990..1083162,1106320..1110928)
location: region:1052473-1110928:1
so has part: feature:1052473-1054934:1:exon
so has part: feature:1057908-1058235:1:exon
so has part: feature:1079525-1079583:1:exon
so has part: feature:1082990-1083162:1:exon
so has part: feature:1106320-1110928:1:exon

position:1052473:1
position: 1052473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052473-1054934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057908-1058235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1079525-1079583:1:exon

position:1079525:1
position: 1079525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079583:1
position: 1079583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1082990-1083162:1:exon

position:1082990:1
position: 1082990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083162:1
position: 1083162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1106320-1110928:1:exon

position:1106320:1
position: 1106320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PCDH19
product: protocadherin 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 ESTs, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_032123831.1
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(1052474..1054934,1057908..1058235,1079525..1079583,1082993..1083162,1106320..1110928)
location: region:1052474-1110928:1
so has part: feature:1052474-1054934:1:exon
so has part: feature:1057908-1058235:1:exon
so has part: feature:1079525-1079583:1:exon
so has part: feature:1082993-1083162:1:exon
so has part: feature:1106320-1110928:1:exon

position:1052474:1
position: 1052474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052474-1054934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057908-1058235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1079525-1079583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082993-1083162:1:exon

position:1082993:1
position: 1082993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1106320-1110928:1:exon

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19 isoform X1
translation: MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPVINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNNRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQEQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCSTKRTFATFGKEGSEPPAEERLANPKGKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPLHLKSPLSGKPAVPYGAGHCAGSRERESFGNSGPSRPTEAEPRGADSESSGQEGNPLLQERRDKDSPGARRLKDIVL
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(1052794..1054934,1057908..1058235,1079525..1079583,1082990..1083162,1106320..1106909)
location: region:1052794-1106909:1
so has part: feature:1052794-1054934:1:exon
so has part: feature:1057908-1058235:1:exon
so has part: feature:1079525-1079583:1:exon
so has part: feature:1082990-1083162:1:exon
so has part: feature:1106320-1106909:1:exon

XP_031979721.1
type: Protein
SIO_000068: ncbiprotein

position:1052794:1
position: 1052794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106909:1
position: 1106909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052794-1054934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057908-1058235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1079525-1079583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082990-1083162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106320-1106909:1:exon

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19 isoform X2
translation: MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPVINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNNRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQEQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCSTKRTFATFGKEGSEPPAEERLANPKGKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPLHLKSPLSGKPAVPYGAGHCAGSRERESFGNSGPSRPTEAEPRGADSESSGQEGNPLLQERRDKDSPGARRLKDIVL
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(1052794..1054934,1057908..1058235,1079525..1079583,1082993..1083162,1106320..1106909)
location: region:1052794-1106909:1
so has part: feature:1052794-1054934:1:exon
so has part: feature:1057908-1058235:1:exon
so has part: feature:1079525-1079583:1:exon
so has part: feature:1082993-1083162:1:exon
so has part: feature:1106320-1106909:1:exon

XP_031979722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1052794-1054934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057908-1058235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1079525-1079583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1082993-1083162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106320-1106909:1:exon

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19 isoform X3
translation: MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPVINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNNRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPEMLEPVIEWPMENRTEDTEGPGEAVLQALPFPPGRHSGFLGTICHFCGPQWRLQHRGKVRRLVLQVEMCSLMQRMRSRRVFLEDFVTPKRRDAHCSLGERSALFFNNKG
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(1052794..1054934,1057908..1058235,1074601..1074927)
location: region:1052794-1074927:1
so has part: feature:1052794-1054934:1:exon
so has part: feature:1057908-1058235:1:exon
so has part: feature:1074601-1074927:1:exon

XP_031979723.1
type: Protein
SIO_000068: ncbiprotein

position:1074927:1
position: 1074927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052794-1054934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057908-1058235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074601-1074927:1:exon

LOC116451252
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1186227..1193793
location: region:1186227-1193793:1
so has part: feature:1186227-1193793:1:exon
subclass of: SO_0000011

116451252
type: Gene
SIO_000068: ncbigene

position:1186227:1
position: 1186227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193793:1
position: 1193793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1186227-1193793:1:exon

LOC116451252
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451252
product: uncharacterized LOC116451252
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004243150.1
SIO_010081: LOC116451252
subclass of: SO_0000673
so part of: LOC116451252
location: join(1186227..1186515,1190166..1190665,1191173..1193793)
location: region:1186227-1193793:1
so has part: feature:1186227-1186515:1:exon
so has part: feature:1190166-1190665:1:exon
so has part: feature:1191173-1193793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1186227-1186515:1:exon

position:1186515:1
position: 1186515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1190166-1190665:1:exon

position:1190166:1
position: 1190166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190665:1
position: 1190665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1191173-1193793:1:exon

position:1191173:1
position: 1191173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451087
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1220287..1235686)
location: region:1220287-1235686:-1
so has part: feature:1220287-1235686:-1:exon
subclass of: SO_0000011

116451087
type: Gene
SIO_000068: ncbigene

position:1220287:-1
position: 1220287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235686:-1
position: 1235686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1220287-1235686:-1:exon

LOC116451087
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451087
product: uncharacterized LOC116451087
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004243088.1
SIO_010081: LOC116451087
subclass of: SO_0000673
so part of: LOC116451087
location: complement(join(1220287..1220791,1233170..1233296,1235374..1235686))
location: region:1220287-1235686:-1
so has part: feature:1235374-1235686:-1:exon
so has part: feature:1233170-1233296:-1:exon
so has part: feature:1220287-1220791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1235374-1235686:-1:exon

position:1235374:-1
position: 1235374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1233170-1233296:-1:exon

position:1233170:-1
position: 1233170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233296:-1
position: 1233296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1220287-1220791:-1:exon

position:1220791:-1
position: 1220791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451189
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1536210..1616751)
location: region:1536210-1616751:-1
so has part: feature:1536210-1616751:-1:exon
subclass of: SO_0000011

116451189
type: Gene
SIO_000068: ncbigene

position:1536210:-1
position: 1536210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616751:-1
position: 1616751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1536210-1616751:-1:exon

LOC116451189
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451189
product: uncharacterized LOC116451189, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004243118.1
SIO_010081: LOC116451189
subclass of: SO_0000673
so part of: LOC116451189
location: complement(join(1536210..1536329,1537305..1538824,1554510..1554589,1616571..1616751))
location: region:1536210-1616751:-1
so has part: feature:1616571-1616751:-1:exon
so has part: feature:1554510-1554589:-1:exon
so has part: feature:1537305-1538824:-1:exon
so has part: feature:1536210-1536329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1616571-1616751:-1:exon

position:1616571:-1
position: 1616571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1554510-1554589:-1:exon

position:1554510:-1
position: 1554510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1554589:-1
position: 1554589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1537305-1538824:-1:exon

position:1537305:-1
position: 1537305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1538824:-1
position: 1538824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1536210-1536329:-1:exon

position:1536329:-1
position: 1536329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451189
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451189
product: uncharacterized LOC116451189, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004243119.1
SIO_010081: LOC116451189
subclass of: SO_0000673
so part of: LOC116451189
location: complement(join(1536210..1536329,1537305..1538824,1554510..1554589,1560909..1563556))
location: region:1536210-1563556:-1
so has part: feature:1560909-1563556:-1:exon
so has part: feature:1554510-1554589:-1:exon
so has part: feature:1537305-1538824:-1:exon
so has part: feature:1536210-1536329:-1:exon

position:1563556:-1
position: 1563556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560909-1563556:-1:exon

position:1560909:-1
position: 1560909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1554510-1554589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1537305-1538824:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1536210-1536329:-1:exon

DIAPH2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1685493..1871208)
location: region:1685493-1871208:-1
so has part: feature:1685493-1871208:-1:exon
subclass of: SO_0000010

116451237
type: Gene
SIO_000068: ncbigene

position:1685493:-1
position: 1685493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871208:-1
position: 1871208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1685493-1871208:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_032124441.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1685493..1690014,1742308..1742403,1751632..1751767,1761187..1761351,1779364..1779488,1790019..1790148,1796971..1797210,1802611..1802712,1806837..1806931,1808346..1808447,1826591..1826705,1829701..1830348,1831991..1832095,1832889..1832953,1833243..1833361,1833916..1834032,1834979..1835097,1836938..1837048,1839430..1839541,1840344..1840480,1841462..1841531,1841613..1841687,1842067..1842206,1846399..1846419,1850008..1850112,1850978..1851154,1871063..1871208))
location: region:1685493-1871208:-1
so has part: feature:1871063-1871208:-1:exon
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so has part: feature:1850008-1850112:-1:exon
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so has part: feature:1839430-1839541:-1:exon
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so has part: feature:1685493-1690014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1871063-1871208:-1:exon

position:1871063:-1
position: 1871063
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:1850978-1851154:-1:exon

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reference: sequence
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position:1851154:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:1850008-1850112:-1:exon

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reference: sequence
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position:1850112:-1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:1846399-1846419:-1:exon

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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1846419:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:1842067-1842206:-1:exon

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position: 1842067
reference: sequence
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position:1842206:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:1841613-1841687:-1:exon

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reference: sequence
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position:1841687:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:1841462-1841531:-1:exon

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position: 1841462
reference: sequence
type: ReverseStrandPosition
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position:1841531:-1
position: 1841531
reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:1840344-1840480:-1:exon

position:1840344:-1
position: 1840344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1840480:-1
position: 1840480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1839430-1839541:-1:exon

position:1839430:-1
position: 1839430
reference: sequence
type: ReverseStrandPosition
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position:1839541:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:1836938-1837048:-1:exon

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position: 1836938
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:1834979-1835097:-1:exon

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position: 1834979
reference: sequence
type: ReverseStrandPosition
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position:1835097:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:1833916-1834032:-1:exon

position:1833916:-1
position: 1833916
reference: sequence
type: ReverseStrandPosition
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position:1834032:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:1833243-1833361:-1:exon

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position: 1833243
reference: sequence
type: ReverseStrandPosition
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position:1833361:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:1832889-1832953:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:1831991-1832095:-1:exon

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position: 1831991
reference: sequence
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position:1832095:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:1829701-1830348:-1:exon

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position: 1829701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1830348:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:1826591-1826705:-1:exon

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reference: sequence
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position:1826705:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:1808346-1808447:-1:exon

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reference: sequence
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position:1808447:-1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:1806837-1806931:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:1802611-1802712:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:1796971-1797210:-1:exon

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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:1790019-1790148:-1:exon

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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:1779364-1779488:-1:exon

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reference: sequence
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position:1779488:-1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:1761187-1761351:-1:exon

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reference: sequence
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position:1761351:-1
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:1751632-1751767:-1:exon

position:1751632:-1
position: 1751632
reference: sequence
type: ReverseStrandPosition
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position:1751767:-1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:1742308-1742403:-1:exon

position:1742308:-1
position: 1742308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742403:-1
position: 1742403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1685493-1690014:-1:exon

position:1690014:-1
position: 1690014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_032124440.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1685493..1690014,1742308..1742403,1751632..1751767,1761187..1761351,1779364..1779488,1790019..1790148,1796971..1797210,1802611..1802712,1806837..1806931,1808346..1808447,1826591..1826705,1829701..1830348,1831991..1832095,1832889..1832953,1833243..1833361,1833916..1834032,1834979..1835097,1836938..1837048,1839430..1839541,1840344..1840480,1841462..1841531,1841613..1841687,1842067..1842206,1850008..1850112,1850978..1851154,1853542..1853574,1871063..1871208))
location: region:1685493-1871208:-1
so has part: feature:1871063-1871208:-1:exon
so has part: feature:1853542-1853574:-1:exon
so has part: feature:1850978-1851154:-1:exon
so has part: feature:1850008-1850112:-1:exon
so has part: feature:1842067-1842206:-1:exon
so has part: feature:1841613-1841687:-1:exon
so has part: feature:1841462-1841531:-1:exon
so has part: feature:1840344-1840480:-1:exon
so has part: feature:1839430-1839541:-1:exon
so has part: feature:1836938-1837048:-1:exon
so has part: feature:1834979-1835097:-1:exon
so has part: feature:1833916-1834032:-1:exon
so has part: feature:1833243-1833361:-1:exon
so has part: feature:1832889-1832953:-1:exon
so has part: feature:1831991-1832095:-1:exon
so has part: feature:1829701-1830348:-1:exon
so has part: feature:1826591-1826705:-1:exon
so has part: feature:1808346-1808447:-1:exon
so has part: feature:1806837-1806931:-1:exon
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so has part: feature:1790019-1790148:-1:exon
so has part: feature:1779364-1779488:-1:exon
so has part: feature:1761187-1761351:-1:exon
so has part: feature:1751632-1751767:-1:exon
so has part: feature:1742308-1742403:-1:exon
so has part: feature:1685493-1690014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1871063-1871208:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1853542-1853574:-1:exon

position:1853542:-1
position: 1853542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853574:-1
position: 1853574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1850978-1851154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1850008-1850112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1842067-1842206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1841613-1841687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1841462-1841531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1840344-1840480:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1839430-1839541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1836938-1837048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1834979-1835097:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833916-1834032:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1833243-1833361:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1832889-1832953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1831991-1832095:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1829701-1830348:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1826591-1826705:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1808346-1808447:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1806837-1806931:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1802611-1802712:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1796971-1797210:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1790019-1790148:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1779364-1779488:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1761187-1761351:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751632-1751767:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1742308-1742403:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1685493-1690014:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 127 samples with support for all annotated introns
transcript id: XM_032124439.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1685493..1690014,1742308..1742403,1751632..1751767,1761187..1761351,1779364..1779488,1790019..1790148,1796971..1797210,1802611..1802712,1806837..1806931,1808346..1808447,1826591..1826705,1829701..1830348,1831991..1832095,1832889..1832953,1833243..1833361,1833916..1834032,1834979..1835097,1836938..1837048,1839430..1839541,1840344..1840480,1841462..1841531,1841613..1841687,1842067..1842206,1846399..1846419,1850008..1850112,1850978..1851154,1853542..1853574,1871063..1871208))
location: region:1685493-1871208:-1
so has part: feature:1871063-1871208:-1:exon
so has part: feature:1853542-1853574:-1:exon
so has part: feature:1850978-1851154:-1:exon
so has part: feature:1850008-1850112:-1:exon
so has part: feature:1846399-1846419:-1:exon
so has part: feature:1842067-1842206:-1:exon
so has part: feature:1841613-1841687:-1:exon
so has part: feature:1841462-1841531:-1:exon
so has part: feature:1840344-1840480:-1:exon
so has part: feature:1839430-1839541:-1:exon
so has part: feature:1836938-1837048:-1:exon
so has part: feature:1834979-1835097:-1:exon
so has part: feature:1833916-1834032:-1:exon
so has part: feature:1833243-1833361:-1:exon
so has part: feature:1832889-1832953:-1:exon
so has part: feature:1831991-1832095:-1:exon
so has part: feature:1829701-1830348:-1:exon
so has part: feature:1826591-1826705:-1:exon
so has part: feature:1808346-1808447:-1:exon
so has part: feature:1806837-1806931:-1:exon
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so has part: feature:1790019-1790148:-1:exon
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so has part: feature:1751632-1751767:-1:exon
so has part: feature:1742308-1742403:-1:exon
so has part: feature:1685493-1690014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1871063-1871208:-1:exon

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SIO_000300: 2
SIO_000628: feature:1853542-1853574:-1:exon

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SIO_000300: 3
SIO_000628: feature:1850978-1851154:-1:exon

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SIO_000300: 4
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SIO_000628: feature:1840344-1840480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1839430-1839541:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1836938-1837048:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1834979-1835097:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1833916-1834032:-1:exon

urn:…
SIO_000300: 14
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urn:…
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urn:…
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SIO_000628: feature:1808346-1808447:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1806837-1806931:-1:exon

urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:1796971-1797210:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1790019-1790148:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1779364-1779488:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1761187-1761351:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751632-1751767:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1742308-1742403:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1685493-1690014:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_032124442.1
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1685493..1690014,1742308..1742403,1751632..1751767,1761187..1761351,1779364..1779488,1790019..1790148,1796971..1797210,1802611..1802712,1806837..1806931,1808346..1808447,1826591..1826705,1829701..1830348,1831991..1832095,1832889..1832953,1833243..1833361,1833916..1834032,1834979..1835097,1836938..1837048,1839430..1839541,1840344..1840480,1841462..1841531,1841613..1841687,1842067..1842206,1846399..1846419,1850008..1850112,1850978..1851154,1853510..1853561))
location: region:1685493-1853561:-1
so has part: feature:1853510-1853561:-1:exon
so has part: feature:1850978-1851154:-1:exon
so has part: feature:1850008-1850112:-1:exon
so has part: feature:1846399-1846419:-1:exon
so has part: feature:1842067-1842206:-1:exon
so has part: feature:1841613-1841687:-1:exon
so has part: feature:1841462-1841531:-1:exon
so has part: feature:1840344-1840480:-1:exon
so has part: feature:1839430-1839541:-1:exon
so has part: feature:1836938-1837048:-1:exon
so has part: feature:1834979-1835097:-1:exon
so has part: feature:1833916-1834032:-1:exon
so has part: feature:1833243-1833361:-1:exon
so has part: feature:1832889-1832953:-1:exon
so has part: feature:1831991-1832095:-1:exon
so has part: feature:1829701-1830348:-1:exon
so has part: feature:1826591-1826705:-1:exon
so has part: feature:1808346-1808447:-1:exon
so has part: feature:1806837-1806931:-1:exon
so has part: feature:1802611-1802712:-1:exon
so has part: feature:1796971-1797210:-1:exon
so has part: feature:1790019-1790148:-1:exon
so has part: feature:1779364-1779488:-1:exon
so has part: feature:1761187-1761351:-1:exon
so has part: feature:1751632-1751767:-1:exon
so has part: feature:1742308-1742403:-1:exon
so has part: feature:1685493-1690014:-1:exon

position:1853561:-1
position: 1853561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1853510-1853561:-1:exon

position:1853510:-1
position: 1853510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1850978-1851154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1850008-1850112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1846399-1846419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1842067-1842206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1841613-1841687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1841462-1841531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1840344-1840480:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1839430-1839541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1836938-1837048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1834979-1835097:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833916-1834032:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1833243-1833361:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1832889-1832953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1831991-1832095:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1829701-1830348:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1826591-1826705:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1808346-1808447:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1806837-1806931:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1802611-1802712:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1796971-1797210:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1790019-1790148:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1779364-1779488:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1761187-1761351:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751632-1751767:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1742308-1742403:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1685493-1690014:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X3
translation: MDGQAAPGAGGGGEEPLSSGRMNPKRGGRAAEEESRNKPKLRDRITSFRKSAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLGTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLCAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPGLTGQLTEVPAIPPALSSENAPPSPAPSLPGGAIPPPPPLPGGATIPPPPPLPGGATIPPPPPLPGGTTIPPPPPLPGGAVIPPPPPLPGAASLPPPPPPLPGGAIPPPPPLPGVPPPPPLPGAAGPPPPPPLPGAAGPPPPPPLPGGAGPPPPPPLPGGAVPPPPPFGGPPMPPPLGGAPFAPFMVMPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMMKLYENLGEYFTFDPKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1689950..1690014,1742308..1742403,1751632..1751767,1761187..1761351,1779364..1779488,1790019..1790148,1796971..1797210,1802611..1802712,1806837..1806931,1808346..1808447,1826591..1826705,1829701..1830348,1831991..1832095,1832889..1832953,1833243..1833361,1833916..1834032,1834979..1835097,1836938..1837048,1839430..1839541,1840344..1840480,1841462..1841531,1841613..1841687,1842067..1842206,1846399..1846419,1850008..1850112,1850978..1851154,1871063..1871185))
location: region:1689950-1871185:-1
so has part: feature:1871063-1871185:-1:exon
so has part: feature:1850978-1851154:-1:exon
so has part: feature:1850008-1850112:-1:exon
so has part: feature:1846399-1846419:-1:exon
so has part: feature:1842067-1842206:-1:exon
so has part: feature:1841613-1841687:-1:exon
so has part: feature:1841462-1841531:-1:exon
so has part: feature:1840344-1840480:-1:exon
so has part: feature:1839430-1839541:-1:exon
so has part: feature:1836938-1837048:-1:exon
so has part: feature:1834979-1835097:-1:exon
so has part: feature:1833916-1834032:-1:exon
so has part: feature:1833243-1833361:-1:exon
so has part: feature:1832889-1832953:-1:exon
so has part: feature:1831991-1832095:-1:exon
so has part: feature:1829701-1830348:-1:exon
so has part: feature:1826591-1826705:-1:exon
so has part: feature:1808346-1808447:-1:exon
so has part: feature:1806837-1806931:-1:exon
so has part: feature:1802611-1802712:-1:exon
so has part: feature:1796971-1797210:-1:exon
so has part: feature:1790019-1790148:-1:exon
so has part: feature:1779364-1779488:-1:exon
so has part: feature:1761187-1761351:-1:exon
so has part: feature:1751632-1751767:-1:exon
so has part: feature:1742308-1742403:-1:exon
so has part: feature:1689950-1690014:-1:exon

XP_031980332.1
type: Protein
SIO_000068: ncbiprotein

position:1689950:-1
position: 1689950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871185:-1
position: 1871185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1871063-1871185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1850978-1851154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1850008-1850112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1846399-1846419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1842067-1842206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1841613-1841687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1841462-1841531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1840344-1840480:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1839430-1839541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1836938-1837048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1834979-1835097:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833916-1834032:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1833243-1833361:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1832889-1832953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1831991-1832095:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1829701-1830348:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1826591-1826705:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1808346-1808447:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1806837-1806931:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1802611-1802712:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1796971-1797210:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1790019-1790148:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1779364-1779488:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1761187-1761351:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751632-1751767:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1742308-1742403:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1689950-1690014:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X2
translation: MDGQAAPGAGGGGEEPLSSGRMNPKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKSAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLGTKREMVVQYISATAKSGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLCAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPGLTGQLTEVPAIPPALSSENAPPSPAPSLPGGAIPPPPPLPGGATIPPPPPLPGGATIPPPPPLPGGTTIPPPPPLPGGAVIPPPPPLPGAASLPPPPPPLPGGAIPPPPPLPGVPPPPPLPGAAGPPPPPPLPGAAGPPPPPPLPGGAGPPPPPPLPGGAVPPPPPFGGPPMPPPLGGAPFAPFMVMPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMMKLYENLGEYFTFDPKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1689950..1690014,1742308..1742403,1751632..1751767,1761187..1761351,1779364..1779488,1790019..1790148,1796971..1797210,1802611..1802712,1806837..1806931,1808346..1808447,1826591..1826705,1829701..1830348,1831991..1832095,1832889..1832953,1833243..1833361,1833916..1834032,1834979..1835097,1836938..1837048,1839430..1839541,1840344..1840480,1841462..1841531,1841613..1841687,1842067..1842206,1850008..1850112,1850978..1851154,1853542..1853574,1871063..1871185))
location: region:1689950-1871185:-1
so has part: feature:1871063-1871185:-1:exon
so has part: feature:1853542-1853574:-1:exon
so has part: feature:1850978-1851154:-1:exon
so has part: feature:1850008-1850112:-1:exon
so has part: feature:1842067-1842206:-1:exon
so has part: feature:1841613-1841687:-1:exon
so has part: feature:1841462-1841531:-1:exon
so has part: feature:1840344-1840480:-1:exon
so has part: feature:1839430-1839541:-1:exon
so has part: feature:1836938-1837048:-1:exon
so has part: feature:1834979-1835097:-1:exon
so has part: feature:1833916-1834032:-1:exon
so has part: feature:1833243-1833361:-1:exon
so has part: feature:1832889-1832953:-1:exon
so has part: feature:1831991-1832095:-1:exon
so has part: feature:1829701-1830348:-1:exon
so has part: feature:1826591-1826705:-1:exon
so has part: feature:1808346-1808447:-1:exon
so has part: feature:1806837-1806931:-1:exon
so has part: feature:1802611-1802712:-1:exon
so has part: feature:1796971-1797210:-1:exon
so has part: feature:1790019-1790148:-1:exon
so has part: feature:1779364-1779488:-1:exon
so has part: feature:1761187-1761351:-1:exon
so has part: feature:1751632-1751767:-1:exon
so has part: feature:1742308-1742403:-1:exon
so has part: feature:1689950-1690014:-1:exon

XP_031980331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1871063-1871185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1853542-1853574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1850978-1851154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1850008-1850112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1842067-1842206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1841613-1841687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1841462-1841531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1840344-1840480:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1839430-1839541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1836938-1837048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1834979-1835097:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833916-1834032:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1833243-1833361:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1832889-1832953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1831991-1832095:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1829701-1830348:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1826591-1826705:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1808346-1808447:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1806837-1806931:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1802611-1802712:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1796971-1797210:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1790019-1790148:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1779364-1779488:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1761187-1761351:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751632-1751767:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1742308-1742403:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1689950-1690014:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X1
translation: MDGQAAPGAGGGGEEPLSSGRMNPKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKSAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLGTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLCAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPGLTGQLTEVPAIPPALSSENAPPSPAPSLPGGAIPPPPPLPGGATIPPPPPLPGGATIPPPPPLPGGTTIPPPPPLPGGAVIPPPPPLPGAASLPPPPPPLPGGAIPPPPPLPGVPPPPPLPGAAGPPPPPPLPGAAGPPPPPPLPGGAGPPPPPPLPGGAVPPPPPFGGPPMPPPLGGAPFAPFMVMPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMMKLYENLGEYFTFDPKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1689950..1690014,1742308..1742403,1751632..1751767,1761187..1761351,1779364..1779488,1790019..1790148,1796971..1797210,1802611..1802712,1806837..1806931,1808346..1808447,1826591..1826705,1829701..1830348,1831991..1832095,1832889..1832953,1833243..1833361,1833916..1834032,1834979..1835097,1836938..1837048,1839430..1839541,1840344..1840480,1841462..1841531,1841613..1841687,1842067..1842206,1846399..1846419,1850008..1850112,1850978..1851154,1853542..1853574,1871063..1871185))
location: region:1689950-1871185:-1
so has part: feature:1871063-1871185:-1:exon
so has part: feature:1853542-1853574:-1:exon
so has part: feature:1850978-1851154:-1:exon
so has part: feature:1850008-1850112:-1:exon
so has part: feature:1846399-1846419:-1:exon
so has part: feature:1842067-1842206:-1:exon
so has part: feature:1841613-1841687:-1:exon
so has part: feature:1841462-1841531:-1:exon
so has part: feature:1840344-1840480:-1:exon
so has part: feature:1839430-1839541:-1:exon
so has part: feature:1836938-1837048:-1:exon
so has part: feature:1834979-1835097:-1:exon
so has part: feature:1833916-1834032:-1:exon
so has part: feature:1833243-1833361:-1:exon
so has part: feature:1832889-1832953:-1:exon
so has part: feature:1831991-1832095:-1:exon
so has part: feature:1829701-1830348:-1:exon
so has part: feature:1826591-1826705:-1:exon
so has part: feature:1808346-1808447:-1:exon
so has part: feature:1806837-1806931:-1:exon
so has part: feature:1802611-1802712:-1:exon
so has part: feature:1796971-1797210:-1:exon
so has part: feature:1790019-1790148:-1:exon
so has part: feature:1779364-1779488:-1:exon
so has part: feature:1761187-1761351:-1:exon
so has part: feature:1751632-1751767:-1:exon
so has part: feature:1742308-1742403:-1:exon
so has part: feature:1689950-1690014:-1:exon

XP_031980330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1871063-1871185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1853542-1853574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1850978-1851154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1850008-1850112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1846399-1846419:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1842067-1842206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1841613-1841687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1841462-1841531:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1840344-1840480:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1839430-1839541:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1836938-1837048:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1834979-1835097:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1833916-1834032:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1833243-1833361:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1832889-1832953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1831991-1832095:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1829701-1830348:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1826591-1826705:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1808346-1808447:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1806837-1806931:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1802611-1802712:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1796971-1797210:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1790019-1790148:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1779364-1779488:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1761187-1761351:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1751632-1751767:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1742308-1742403:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1689950-1690014:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X4
translation: MRDRITSFRKSAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLGTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLCAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPGLTGQLTEVPAIPPALSSENAPPSPAPSLPGGAIPPPPPLPGGATIPPPPPLPGGATIPPPPPLPGGTTIPPPPPLPGGAVIPPPPPLPGAASLPPPPPPLPGGAIPPPPPLPGVPPPPPLPGAAGPPPPPPLPGAAGPPPPPPLPGGAGPPPPPPLPGGAVPPPPPFGGPPMPPPLGGAPFAPFMVMPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMMKLYENLGEYFTFDPKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1689950..1690014,1742308..1742403,1751632..1751767,1761187..1761351,1779364..1779488,1790019..1790148,1796971..1797210,1802611..1802712,1806837..1806931,1808346..1808447,1826591..1826705,1829701..1830348,1831991..1832095,1832889..1832953,1833243..1833361,1833916..1834032,1834979..1835097,1836938..1837048,1839430..1839541,1840344..1840480,1841462..1841531,1841613..1841687,1842067..1842206,1846399..1846419,1850008..1850112,1850978..1851154,1853510..1853512))
location: region:1689950-1853512:-1
so has part: feature:1853510-1853512:-1:exon
so has part: feature:1850978-1851154:-1:exon
so has part: feature:1850008-1850112:-1:exon
so has part: feature:1846399-1846419:-1:exon
so has part: feature:1842067-1842206:-1:exon
so has part: feature:1841613-1841687:-1:exon
so has part: feature:1841462-1841531:-1:exon
so has part: feature:1840344-1840480:-1:exon
so has part: feature:1839430-1839541:-1:exon
so has part: feature:1836938-1837048:-1:exon
so has part: feature:1834979-1835097:-1:exon
so has part: feature:1833916-1834032:-1:exon
so has part: feature:1833243-1833361:-1:exon
so has part: feature:1832889-1832953:-1:exon
so has part: feature:1831991-1832095:-1:exon
so has part: feature:1829701-1830348:-1:exon
so has part: feature:1826591-1826705:-1:exon
so has part: feature:1808346-1808447:-1:exon
so has part: feature:1806837-1806931:-1:exon
so has part: feature:1802611-1802712:-1:exon
so has part: feature:1796971-1797210:-1:exon
so has part: feature:1790019-1790148:-1:exon
so has part: feature:1779364-1779488:-1:exon
so has part: feature:1761187-1761351:-1:exon
so has part: feature:1751632-1751767:-1:exon
so has part: feature:1742308-1742403:-1:exon
so has part: feature:1689950-1690014:-1:exon

XP_031980333.1
type: Protein
SIO_000068: ncbiprotein

position:1853512:-1
position: 1853512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1853510-1853512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1850978-1851154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1850008-1850112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1846399-1846419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1842067-1842206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1841613-1841687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1841462-1841531:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1840344-1840480:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1839430-1839541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1836938-1837048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1834979-1835097:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1833916-1834032:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1833243-1833361:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1832889-1832953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1831991-1832095:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1829701-1830348:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1826591-1826705:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1808346-1808447:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1806837-1806931:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1802611-1802712:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1796971-1797210:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1790019-1790148:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1779364-1779488:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1761187-1761351:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1751632-1751767:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1742308-1742403:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1689950-1690014:-1:exon

LOC116451223
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1872781..1875898)
location: region:1872781-1875898:-1
so has part: feature:1872781-1875898:-1:exon
subclass of: SO_0000011

116451223
type: Gene
SIO_000068: ncbigene

position:1872781:-1
position: 1872781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875898:-1
position: 1875898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1872781-1875898:-1:exon

LOC116451223
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451223
product: uncharacterized LOC116451223
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004243136.1
SIO_010081: LOC116451223
subclass of: SO_0000673
so part of: LOC116451223
location: complement(join(1872781..1875494,1875676..1875898))
location: region:1872781-1875898:-1
so has part: feature:1875676-1875898:-1:exon
so has part: feature:1872781-1875494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1875676-1875898:-1:exon

position:1875676:-1
position: 1875676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1872781-1875494:-1:exon

position:1875494:-1
position: 1875494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451043
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2136790..2155116
location: region:2136790-2155116:1
so has part: feature:2136790-2155116:1:exon
subclass of: SO_0000011

116451043
type: Gene
SIO_000068: ncbigene

position:2136790:1
position: 2136790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2155116:1
position: 2155116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2136790-2155116:1:exon

LOC116451043
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451043
product: uncharacterized LOC116451043
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004243071.1
SIO_010081: LOC116451043
subclass of: SO_0000673
so part of: LOC116451043
location: join(2136790..2136880,2138145..2138251,2143224..2143373,2143871..2143947,2153482..2153566,2154575..2155116)
location: region:2136790-2155116:1
so has part: feature:2136790-2136880:1:exon
so has part: feature:2138145-2138251:1:exon
so has part: feature:2143224-2143373:1:exon
so has part: feature:2143871-2143947:1:exon
so has part: feature:2153482-2153566:1:exon
so has part: feature:2154575-2155116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2136790-2136880:1:exon

position:2136880:1
position: 2136880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2138145-2138251:1:exon

position:2138145:1
position: 2138145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2138251:1
position: 2138251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2143224-2143373:1:exon

position:2143224:1
position: 2143224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2143373:1
position: 2143373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2143871-2143947:1:exon

position:2143871:1
position: 2143871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2143947:1
position: 2143947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2153482-2153566:1:exon

position:2153482:1
position: 2153482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2153566:1
position: 2153566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2154575-2155116:1:exon

position:2154575:1
position: 2154575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451213
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2226697..2239334
location: region:2226697-2239334:1
so has part: feature:2226697-2239334:1:exon
subclass of: SO_0000011

116451213
type: Gene
SIO_000068: ncbigene

position:2226697:1
position: 2226697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2239334:1
position: 2239334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2226697-2239334:1:exon

LOC116451213
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451213
product: uncharacterized LOC116451213
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004243129.1
SIO_010081: LOC116451213
subclass of: SO_0000673
so part of: LOC116451213
location: join(2226697..2231071,2232486..2232711,2235050..2239334)
location: region:2226697-2239334:1
so has part: feature:2226697-2231071:1:exon
so has part: feature:2232486-2232711:1:exon
so has part: feature:2235050-2239334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2226697-2231071:1:exon

position:2231071:1
position: 2231071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2232486-2232711:1:exon

position:2232486:1
position: 2232486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2232711:1
position: 2232711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2235050-2239334:1:exon

position:2235050:1
position: 2235050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451099
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451099
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2391101..2423556
location: region:2391101-2423556:1
so has part: feature:2391101-2423556:1:exon
subclass of: SO_0000011

116451099
type: Gene
SIO_000068: ncbigene

position:2391101:1
position: 2391101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2423556:1
position: 2423556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2391101-2423556:1:exon

LOC116451099
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451099
product: uncharacterized LOC116451099
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004243089.1
SIO_010081: LOC116451099
subclass of: SO_0000673
so part of: LOC116451099
location: join(2391101..2391388,2393990..2394070,2402116..2405001,2407593..2407748,2407891..2407942,2423350..2423556)
location: region:2391101-2423556:1
so has part: feature:2391101-2391388:1:exon
so has part: feature:2393990-2394070:1:exon
so has part: feature:2402116-2405001:1:exon
so has part: feature:2407593-2407748:1:exon
so has part: feature:2407891-2407942:1:exon
so has part: feature:2423350-2423556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2391101-2391388:1:exon

position:2391388:1
position: 2391388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2393990-2394070:1:exon

position:2393990:1
position: 2393990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394070:1
position: 2394070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2402116-2405001:1:exon

position:2402116:1
position: 2402116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2405001:1
position: 2405001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2407593-2407748:1:exon

position:2407593:1
position: 2407593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2407748:1
position: 2407748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2407891-2407942:1:exon

position:2407891:1
position: 2407891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2407942:1
position: 2407942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2423350-2423556:1:exon

position:2423350:1
position: 2423350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451100
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2407639..2409046)
location: region:2407639-2409046:-1
so has part: feature:2407639-2409046:-1:exon
subclass of: SO_0000011

116451100
type: Gene
SIO_000068: ncbigene

position:2407639:-1
position: 2407639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2409046:-1
position: 2409046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2407639-2409046:-1:exon

LOC116451100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451100
product: uncharacterized LOC116451100
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004243090.1
SIO_010081: LOC116451100
subclass of: SO_0000673
so part of: LOC116451100
location: complement(join(2407639..2407725,2408762..2408820,2408958..2409046))
location: region:2407639-2409046:-1
so has part: feature:2408958-2409046:-1:exon
so has part: feature:2408762-2408820:-1:exon
so has part: feature:2407639-2407725:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2408958-2409046:-1:exon

position:2408958:-1
position: 2408958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2408762-2408820:-1:exon

position:2408762:-1
position: 2408762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408820:-1
position: 2408820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2407639-2407725:-1:exon

position:2407725:-1
position: 2407725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2456138..2894459)
location: region:2456138-2894459:-1
so has part: feature:2456138-2894459:-1:exon
subclass of: SO_0000010

116450864
type: Gene
SIO_000068: ncbigene

position:2456138:-1
position: 2456138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2894459:-1
position: 2894459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2456138-2894459:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032123757.1
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2456138..2460861,2578051..2578249,2694136..2694207,2824255..2826741,2850058..2850641,2893957..2894459))
location: region:2456138-2894459:-1
so has part: feature:2893957-2894459:-1:exon
so has part: feature:2850058-2850641:-1:exon
so has part: feature:2824255-2826741:-1:exon
so has part: feature:2694136-2694207:-1:exon
so has part: feature:2578051-2578249:-1:exon
so has part: feature:2456138-2460861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2893957-2894459:-1:exon

position:2893957:-1
position: 2893957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2850058-2850641:-1:exon

position:2850058:-1
position: 2850058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2850641:-1
position: 2850641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2824255-2826741:-1:exon

position:2824255:-1
position: 2824255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2826741:-1
position: 2826741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2694136-2694207:-1:exon

position:2694136:-1
position: 2694136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2694207:-1
position: 2694207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2578051-2578249:-1:exon

position:2578051:-1
position: 2578051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2578249:-1
position: 2578249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2456138-2460861:-1:exon

position:2460861:-1
position: 2460861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_032123756.1
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2456138..2460861,2578051..2578249,2694136..2694207,2824255..2826741,2829809..2829856,2850058..2850641,2893957..2894459))
location: region:2456138-2894459:-1
so has part: feature:2893957-2894459:-1:exon
so has part: feature:2850058-2850641:-1:exon
so has part: feature:2829809-2829856:-1:exon
so has part: feature:2824255-2826741:-1:exon
so has part: feature:2694136-2694207:-1:exon
so has part: feature:2578051-2578249:-1:exon
so has part: feature:2456138-2460861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2893957-2894459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850058-2850641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2829809-2829856:-1:exon

position:2829809:-1
position: 2829809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2829856:-1
position: 2829856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2824255-2826741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2694136-2694207:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2578051-2578249:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2456138-2460861:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X2
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDIPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGASTSHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALTQFQQPNTSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQGGPRPQFYNTCERHCASEDPVKVIPLASFAASHQAPGPGSNTTFIHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2460470..2460861,2578051..2578249,2694136..2694207,2824255..2826741,2850058..2850597))
location: region:2460470-2850597:-1
so has part: feature:2850058-2850597:-1:exon
so has part: feature:2824255-2826741:-1:exon
so has part: feature:2694136-2694207:-1:exon
so has part: feature:2578051-2578249:-1:exon
so has part: feature:2460470-2460861:-1:exon

XP_031979648.1
type: Protein
SIO_000068: ncbiprotein

position:2460470:-1
position: 2460470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2850597:-1
position: 2850597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2850058-2850597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2824255-2826741:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2694136-2694207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2578051-2578249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2460470-2460861:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X1
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDIPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGASTSHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALTQFQQPNTSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQGGPRPQFYNTCERHCASEDPVKVIPLASFAASHQAPGPGSNTTFIHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2460470..2460861,2578051..2578249,2694136..2694207,2824255..2826741,2829809..2829856,2850058..2850597))
location: region:2460470-2850597:-1
so has part: feature:2850058-2850597:-1:exon
so has part: feature:2829809-2829856:-1:exon
so has part: feature:2824255-2826741:-1:exon
so has part: feature:2694136-2694207:-1:exon
so has part: feature:2578051-2578249:-1:exon
so has part: feature:2460470-2460861:-1:exon

XP_031979647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2850058-2850597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2829809-2829856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2824255-2826741:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2694136-2694207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2578051-2578249:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2460470-2460861:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_032123758.1
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2815810..2818071,2824255..2826741,2829809..2829856,2850058..2850641,2893957..2894458))
location: region:2815810-2894458:-1
so has part: feature:2893957-2894458:-1:exon
so has part: feature:2850058-2850641:-1:exon
so has part: feature:2829809-2829856:-1:exon
so has part: feature:2824255-2826741:-1:exon
so has part: feature:2815810-2818071:-1:exon

position:2815810:-1
position: 2815810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2894458:-1
position: 2894458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893957-2894458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2850058-2850641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2829809-2829856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2824255-2826741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2815810-2818071:-1:exon

position:2818071:-1
position: 2818071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X3
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDIPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2818066..2818071,2824255..2826741,2829809..2829856,2850058..2850597))
location: region:2818066-2850597:-1
so has part: feature:2850058-2850597:-1:exon
so has part: feature:2829809-2829856:-1:exon
so has part: feature:2824255-2826741:-1:exon
so has part: feature:2818066-2818071:-1:exon

XP_031979649.1
type: Protein
SIO_000068: ncbiprotein

position:2818066:-1
position: 2818066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2850058-2850597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2829809-2829856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2824255-2826741:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2818066-2818071:-1:exon

LOC116451041
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2908558..2917354
location: region:2908558-2917354:1
so has part: feature:2908558-2917354:1:exon
subclass of: SO_0000011

116451041
type: Gene
SIO_000068: ncbigene

position:2908558:1
position: 2908558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2917354:1
position: 2917354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2908558-2917354:1:exon

LOC116451041
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451041
product: uncharacterized LOC116451041
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004243070.1
SIO_010081: LOC116451041
subclass of: SO_0000673
so part of: LOC116451041
location: join(2908558..2908656,2915680..2917354)
location: region:2908558-2917354:1
so has part: feature:2908558-2908656:1:exon
so has part: feature:2915680-2917354:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2908558-2908656:1:exon

position:2908656:1
position: 2908656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2915680-2917354:1:exon

position:2915680:1
position: 2915680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451130
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3304502..3332265
location: region:3304502-3332265:1
so has part: feature:3304502-3332265:1:exon
subclass of: SO_0000011

116451130
type: Gene
SIO_000068: ncbigene

position:3304502:1
position: 3304502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3332265:1
position: 3332265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3304502-3332265:1:exon

LOC116451130
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451130
product: uncharacterized LOC116451130
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004243105.1
SIO_010081: LOC116451130
subclass of: SO_0000673
so part of: LOC116451130
location: join(3304502..3304613,3314444..3314532,3332128..3332265)
location: region:3304502-3332265:1
so has part: feature:3304502-3304613:1:exon
so has part: feature:3314444-3314532:1:exon
so has part: feature:3332128-3332265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3304502-3304613:1:exon

position:3304613:1
position: 3304613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3314444-3314532:1:exon

position:3314444:1
position: 3314444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3314532:1
position: 3314532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3332128-3332265:1:exon

position:3332128:1
position: 3332128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451209
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451209
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3360554..3379181)
location: region:3360554-3379181:-1
so has part: feature:3360554-3379181:-1:exon
subclass of: SO_0000011

116451209
type: Gene
SIO_000068: ncbigene

position:3360554:-1
position: 3360554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3379181:-1
position: 3379181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3360554-3379181:-1:exon

LOC116451209
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451209
product: uncharacterized LOC116451209
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XR_004243127.1
SIO_010081: LOC116451209
subclass of: SO_0000673
so part of: LOC116451209
location: complement(join(3360554..3360635,3372758..3372767,3379171..3379181))
location: region:3360554-3379181:-1
so has part: feature:3379171-3379181:-1:exon
so has part: feature:3372758-3372767:-1:exon
so has part: feature:3360554-3360635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3379171-3379181:-1:exon

position:3379171:-1
position: 3379171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3372758-3372767:-1:exon

position:3372758:-1
position: 3372758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3372767:-1
position: 3372767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3360554-3360635:-1:exon

position:3360635:-1
position: 3360635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116451211
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3360555..3379714
location: region:3360555-3379714:1
so has part: feature:3360555-3379714:1:exon
subclass of: SO_0000011

116451211
type: Gene
SIO_000068: ncbigene

position:3360555:1
position: 3360555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3379714:1
position: 3379714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3360555-3379714:1:exon

LOC116451211
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451211
product: uncharacterized LOC116451211
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004243128.1
SIO_010081: LOC116451211
subclass of: SO_0000673
so part of: LOC116451211
location: join(3360555..3360639,3363451..3363457,3368884..3368893,3379704..3379714)
location: region:3360555-3379714:1
so has part: feature:3360555-3360639:1:exon
so has part: feature:3363451-3363457:1:exon
so has part: feature:3368884-3368893:1:exon
so has part: feature:3379704-3379714:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3360555-3360639:1:exon

position:3360639:1
position: 3360639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3363451-3363457:1:exon

position:3363451:1
position: 3363451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3363457:1
position: 3363457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3368884-3368893:1:exon

position:3368884:1
position: 3368884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368893:1
position: 3368893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3379704-3379714:1:exon

position:3379704:1
position: 3379704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116451238
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116451238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3506531..3525404
location: region:3506531-3525404:1
so has part: feature:3506531-3525404:1:exon
subclass of: SO_0000011

116451238
type: Gene
SIO_000068: ncbigene

position:3506531:1
position: 3506531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3525404:1
position: 3525404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3506531-3525404:1:exon

LOC116451238
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116451238
product: uncharacterized LOC116451238
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XR_004243146.1
SIO_010081: LOC116451238
subclass of: SO_0000673
so part of: LOC116451238
location: join(3506531..3506816,3511954..3511956,3525394..3525404)
location: region:3506531-3525404:1
so has part: feature:3506531-3506816:1:exon
so has part: feature:3511954-3511956:1:exon
so has part: feature:3525394-3525404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3506531-3506816:1:exon

position:3506816:1
position: 3506816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3511954-3511956:1:exon

position:3511954:1
position: 3511954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3511956:1
position: 3511956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3525394-3525404:1:exon

position:3525394:1
position: 3525394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLHL4
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3850994..3927236)
location: region:3850994-3927236:-1
so has part: feature:3850994-3927236:-1:exon
subclass of: SO_0000010

116450938
type: Gene
SIO_000068: ncbigene

position:3850994:-1
position: 3850994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927236:-1
position: 3927236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3850994-3927236:-1:exon

KLHL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: KLHL4
product: kelch like family member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032123939.1
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3850994..3852643,3853319..3853490,3854512..3854724,3857381..3857543,3859404..3859628,3862605..3862791,3863841..3864053,3866911..3867107,3867599..3867735,3868165..3868335,3927214..3927236))
location: region:3850994-3927236:-1
so has part: feature:3927214-3927236:-1:exon
so has part: feature:3868165-3868335:-1:exon
so has part: feature:3867599-3867735:-1:exon
so has part: feature:3866911-3867107:-1:exon
so has part: feature:3863841-3864053:-1:exon
so has part: feature:3862605-3862791:-1:exon
so has part: feature:3859404-3859628:-1:exon
so has part: feature:3857381-3857543:-1:exon
so has part: feature:3854512-3854724:-1:exon
so has part: feature:3853319-3853490:-1:exon
so has part: feature:3850994-3852643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3927214-3927236:-1:exon

position:3927214:-1
position: 3927214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3868165-3868335:-1:exon

position:3868165:-1
position: 3868165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3868335:-1
position: 3868335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3867599-3867735:-1:exon

position:3867599:-1
position: 3867599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3867735:-1
position: 3867735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3866911-3867107:-1:exon

position:3866911:-1
position: 3866911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3867107:-1
position: 3867107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3863841-3864053:-1:exon

position:3863841:-1
position: 3863841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3864053:-1
position: 3864053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3862605-3862791:-1:exon

position:3862605:-1
position: 3862605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3862791:-1
position: 3862791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3859404-3859628:-1:exon

position:3859404:-1
position: 3859404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3859628:-1
position: 3859628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3857381-3857543:-1:exon

position:3857381:-1
position: 3857381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3857543:-1
position: 3857543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3854512-3854724:-1:exon

position:3854512:-1
position: 3854512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3854724:-1
position: 3854724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3853319-3853490:-1:exon

position:3853319:-1
position: 3853319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3853490:-1
position: 3853490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3850994-3852643:-1:exon

position:3852643:-1
position: 3852643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: KLHL4
product: kelch like family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_032123937.1
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3850994..3852643,3853319..3853490,3854512..3854724,3857381..3857543,3859404..3859628,3862605..3862791,3863841..3864053,3866911..3867107,3867599..3867735,3868165..3868335,3887954..3888368,3889007..3889120))
location: region:3850994-3889120:-1
so has part: feature:3889007-3889120:-1:exon
so has part: feature:3887954-3888368:-1:exon
so has part: feature:3868165-3868335:-1:exon
so has part: feature:3867599-3867735:-1:exon
so has part: feature:3866911-3867107:-1:exon
so has part: feature:3863841-3864053:-1:exon
so has part: feature:3862605-3862791:-1:exon
so has part: feature:3859404-3859628:-1:exon
so has part: feature:3857381-3857543:-1:exon
so has part: feature:3854512-3854724:-1:exon
so has part: feature:3853319-3853490:-1:exon
so has part: feature:3850994-3852643:-1:exon

position:3889120:-1
position: 3889120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3889007-3889120:-1:exon

position:3889007:-1
position: 3889007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3887954-3888368:-1:exon

position:3887954:-1
position: 3887954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3888368:-1
position: 3888368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3868165-3868335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3867599-3867735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3866911-3867107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3863841-3864053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3862605-3862791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3859404-3859628:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3857381-3857543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3854512-3854724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3853319-3853490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3850994-3852643:-1:exon

KLHL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: KLHL4
product: kelch like family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_032123938.1
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3850994..3852643,3853319..3853490,3854512..3854724,3857381..3857543,3859404..3859628,3862605..3862791,3863841..3864053,3866911..3867107,3867599..3867735,3868165..3868335,3874764..3874859))
location: region:3850994-3874859:-1
so has part: feature:3874764-3874859:-1:exon
so has part: feature:3868165-3868335:-1:exon
so has part: feature:3867599-3867735:-1:exon
so has part: feature:3866911-3867107:-1:exon
so has part: feature:3863841-3864053:-1:exon
so has part: feature:3862605-3862791:-1:exon
so has part: feature:3859404-3859628:-1:exon
so has part: feature:3857381-3857543:-1:exon
so has part: feature:3854512-3854724:-1:exon
so has part: feature:3853319-3853490:-1:exon
so has part: feature:3850994-3852643:-1:exon

position:3874859:-1
position: 3874859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3874764-3874859:-1:exon

position:3874764:-1
position: 3874764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3868165-3868335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3867599-3867735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3866911-3867107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3863841-3864053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3862605-3862791:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3859404-3859628:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3857381-3857543:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3854512-3854724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3853319-3853490:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3850994-3852643:-1:exon

KLHL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 4 isoform X1
translation: MHSNASSPLVSGKKEFDVKQILRLRWRWFSHPSQGSAGSGGCHQQEGYEHRGTPVQNRLKSHSRDRNGLKKNSSPVHHNILAPVPGPTPVHHRSIQTWQQQNLIEQLRSNEDIPKTSTEENSVKEDSSKTTQELQMITEENADESAERLSTTSSSLGMSSNGSDEYFQSTNHAEQTFRKMENYLQQKQLCDVLLIAGDQKIPAHRLVLSAVSDYFAAMFTNDVREAKQEEIKMEGVDPEALRALVRYAYTGILELKEDTIESLLAAACLLQLSQVIEVCCNFLMKQLHPSNCLGIRSFGDAQGCTELLKVAHTYTMEHFIEVIKNQEFLLLPANEIAKLLSSDDINVPDEEAIFQALMMWVRHDLQNRQRDLGMLLSYIRLPLLPPQLLADLENSPMFADDLECQKLLMEAMKYHLLPERRSMMQSPRTKPRKSTVGALYAVGGMDATKGTTTIEKYDLRTNSWIQIGTMNGRRLQFGVAVIDNKLYIVGGRDGLKTSNIVECFNPLTKAWTVMPPMSTHRHGLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNSKLYAVGGRDGSSCLKSMECFDPHTNKWSLCASMSKRRGGVGVATYNGFLYAVGGHDAPASNHCSRLSDCVERYDPKTDAWTTVAPLSVPRDAVGICPLGDRLYAVGGYDGHTYLDTVESYDAQNNEWTEEVPVNIGRAGACVVVVKLP
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3852584..3852643,3853319..3853490,3854512..3854724,3857381..3857543,3859404..3859628,3862605..3862791,3863841..3864053,3866911..3867107,3867599..3867735,3868165..3868335,3887954..3888368,3889007..3889034))
location: region:3852584-3889034:-1
so has part: feature:3889007-3889034:-1:exon
so has part: feature:3887954-3888368:-1:exon
so has part: feature:3868165-3868335:-1:exon
so has part: feature:3867599-3867735:-1:exon
so has part: feature:3866911-3867107:-1:exon
so has part: feature:3863841-3864053:-1:exon
so has part: feature:3862605-3862791:-1:exon
so has part: feature:3859404-3859628:-1:exon
so has part: feature:3857381-3857543:-1:exon
so has part: feature:3854512-3854724:-1:exon
so has part: feature:3853319-3853490:-1:exon
so has part: feature:3852584-3852643:-1:exon

XP_031979828.1
type: Protein
SIO_000068: ncbiprotein

position:3852584:-1
position: 3852584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3889034:-1
position: 3889034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3889007-3889034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3887954-3888368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3868165-3868335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3867599-3867735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3866911-3867107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3863841-3864053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3862605-3862791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3859404-3859628:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3857381-3857543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3854512-3854724:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3853319-3853490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3852584-3852643:-1:exon

KLHL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 4 isoform X2
translation: MSHLNGKIWLSTTSSSLGMSSNGSDEYFQSTNHAEQTFRKMENYLQQKQLCDVLLIAGDQKIPAHRLVLSAVSDYFAAMFTNDVREAKQEEIKMEGVDPEALRALVRYAYTGILELKEDTIESLLAAACLLQLSQVIEVCCNFLMKQLHPSNCLGIRSFGDAQGCTELLKVAHTYTMEHFIEVIKNQEFLLLPANEIAKLLSSDDINVPDEEAIFQALMMWVRHDLQNRQRDLGMLLSYIRLPLLPPQLLADLENSPMFADDLECQKLLMEAMKYHLLPERRSMMQSPRTKPRKSTVGALYAVGGMDATKGTTTIEKYDLRTNSWIQIGTMNGRRLQFGVAVIDNKLYIVGGRDGLKTSNIVECFNPLTKAWTVMPPMSTHRHGLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNSKLYAVGGRDGSSCLKSMECFDPHTNKWSLCASMSKRRGGVGVATYNGFLYAVGGHDAPASNHCSRLSDCVERYDPKTDAWTTVAPLSVPRDAVGICPLGDRLYAVGGYDGHTYLDTVESYDAQNNEWTEEVPVNIGRAGACVVVVKLP
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3852584..3852643,3853319..3853490,3854512..3854724,3857381..3857543,3859404..3859628,3862605..3862791,3863841..3864053,3866911..3867107,3867599..3867735,3868165..3868335,3874764..3874789))
location: region:3852584-3874789:-1
so has part: feature:3874764-3874789:-1:exon
so has part: feature:3868165-3868335:-1:exon
so has part: feature:3867599-3867735:-1:exon
so has part: feature:3866911-3867107:-1:exon
so has part: feature:3863841-3864053:-1:exon
so has part: feature:3862605-3862791:-1:exon
so has part: feature:3859404-3859628:-1:exon
so has part: feature:3857381-3857543:-1:exon
so has part: feature:3854512-3854724:-1:exon
so has part: feature:3853319-3853490:-1:exon
so has part: feature:3852584-3852643:-1:exon

XP_031979829.1
type: Protein
SIO_000068: ncbiprotein

position:3874789:-1
position: 3874789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3874764-3874789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3868165-3868335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3867599-3867735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3866911-3867107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3863841-3864053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3862605-3862791:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3859404-3859628:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3857381-3857543:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3854512-3854724:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3853319-3853490:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3852584-3852643:-1:exon

KLHL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 4 isoform X3
translation: MSSNGSDEYFQSTNHAEQTFRKMENYLQQKQLCDVLLIAGDQKIPAHRLVLSAVSDYFAAMFTNDVREAKQEEIKMEGVDPEALRALVRYAYTGILELKEDTIESLLAAACLLQLSQVIEVCCNFLMKQLHPSNCLGIRSFGDAQGCTELLKVAHTYTMEHFIEVIKNQEFLLLPANEIAKLLSSDDINVPDEEAIFQALMMWVRHDLQNRQRDLGMLLSYIRLPLLPPQLLADLENSPMFADDLECQKLLMEAMKYHLLPERRSMMQSPRTKPRKSTVGALYAVGGMDATKGTTTIEKYDLRTNSWIQIGTMNGRRLQFGVAVIDNKLYIVGGRDGLKTSNIVECFNPLTKAWTVMPPMSTHRHGLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNSKLYAVGGRDGSSCLKSMECFDPHTNKWSLCASMSKRRGGVGVATYNGFLYAVGGHDAPASNHCSRLSDCVERYDPKTDAWTTVAPLSVPRDAVGICPLGDRLYAVGGYDGHTYLDTVESYDAQNNEWTEEVPVNIGRAGACVVVVKLP
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3852584..3852643,3853319..3853490,3854512..3854724,3857381..3857543,3859404..3859628,3862605..3862791,3863841..3864053,3866911..3867107,3867599..3867735,3868165..3868307))
location: region:3852584-3868307:-1
so has part: feature:3868165-3868307:-1:exon
so has part: feature:3867599-3867735:-1:exon
so has part: feature:3866911-3867107:-1:exon
so has part: feature:3863841-3864053:-1:exon
so has part: feature:3862605-3862791:-1:exon
so has part: feature:3859404-3859628:-1:exon
so has part: feature:3857381-3857543:-1:exon
so has part: feature:3854512-3854724:-1:exon
so has part: feature:3853319-3853490:-1:exon
so has part: feature:3852584-3852643:-1:exon

XP_031979830.1
type: Protein
SIO_000068: ncbiprotein

position:3868307:-1
position: 3868307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3868165-3868307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3867599-3867735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3866911-3867107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3863841-3864053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3862605-3862791:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3859404-3859628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3857381-3857543:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3854512-3854724:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3853319-3853490:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3852584-3852643:-1:exon

DACH2
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4040013..4290081)
location: region:4040013-4290081:-1
so has part: feature:4040013-4290081:-1:exon
subclass of: SO_0000010

116451015
type: Gene
SIO_000068: ncbigene

position:4040013:-1
position: 4040013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4290081:-1
position: 4290081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4040013-4290081:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_032124108.1
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(4040013..4041024,4049054..4049119,4052175..4052294,4053656..4053803,4054337..4054482,4084315..4084395,4086015..4086150,4097059..4097231,4100617..4100772,4125843..4125974,4165266..4165381,4289526..4290081))
location: region:4040013-4290081:-1
so has part: feature:4289526-4290081:-1:exon
so has part: feature:4165266-4165381:-1:exon
so has part: feature:4125843-4125974:-1:exon
so has part: feature:4100617-4100772:-1:exon
so has part: feature:4097059-4097231:-1:exon
so has part: feature:4086015-4086150:-1:exon
so has part: feature:4084315-4084395:-1:exon
so has part: feature:4054337-4054482:-1:exon
so has part: feature:4053656-4053803:-1:exon
so has part: feature:4052175-4052294:-1:exon
so has part: feature:4049054-4049119:-1:exon
so has part: feature:4040013-4041024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4289526-4290081:-1:exon

position:4289526:-1
position: 4289526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4165266-4165381:-1:exon

position:4165266:-1
position: 4165266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4165381:-1
position: 4165381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4125843-4125974:-1:exon

position:4125843:-1
position: 4125843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4125974:-1
position: 4125974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4100617-4100772:-1:exon

position:4100617:-1
position: 4100617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4100772:-1
position: 4100772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4097059-4097231:-1:exon

position:4097059:-1
position: 4097059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4097231:-1
position: 4097231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4086015-4086150:-1:exon

position:4086015:-1
position: 4086015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4086150:-1
position: 4086150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4084315-4084395:-1:exon

position:4084315:-1
position: 4084315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4084395:-1
position: 4084395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4054337-4054482:-1:exon

position:4054337:-1
position: 4054337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4054482:-1
position: 4054482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4053656-4053803:-1:exon

position:4053656:-1
position: 4053656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4053803:-1
position: 4053803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4052175-4052294:-1:exon

position:4052175:-1
position: 4052175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4052294:-1
position: 4052294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4049054-4049119:-1:exon

position:4049054:-1
position: 4049054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4049119:-1
position: 4049119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4040013-4041024:-1:exon

position:4041024:-1
position: 4041024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_032124106.1
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(4040013..4041024,4049054..4049119,4052151..4052294,4053656..4053803,4054337..4054482,4084315..4084395,4086015..4086150,4097059..4097231,4100617..4100772,4125843..4125974,4165266..4165381,4289526..4290081))
location: region:4040013-4290081:-1
so has part: feature:4289526-4290081:-1:exon
so has part: feature:4165266-4165381:-1:exon
so has part: feature:4125843-4125974:-1:exon
so has part: feature:4100617-4100772:-1:exon
so has part: feature:4097059-4097231:-1:exon
so has part: feature:4086015-4086150:-1:exon
so has part: feature:4084315-4084395:-1:exon
so has part: feature:4054337-4054482:-1:exon
so has part: feature:4053656-4053803:-1:exon
so has part: feature:4052151-4052294:-1:exon
so has part: feature:4049054-4049119:-1:exon
so has part: feature:4040013-4041024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4289526-4290081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4165266-4165381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4125843-4125974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100617-4100772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097059-4097231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4086015-4086150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4084315-4084395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054337-4054482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4053656-4053803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4052151-4052294:-1:exon

position:4052151:-1
position: 4052151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4049054-4049119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4040013-4041024:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032124109.1
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(4040013..4041024,4049054..4049119,4052151..4052294,4053656..4053803,4054337..4054482,4084315..4084395,4086015..4086150,4097059..4097231,4100617..4100772,4125843..4125974,4165266..4165381,4201880..4201947))
location: region:4040013-4201947:-1
so has part: feature:4201880-4201947:-1:exon
so has part: feature:4165266-4165381:-1:exon
so has part: feature:4125843-4125974:-1:exon
so has part: feature:4100617-4100772:-1:exon
so has part: feature:4097059-4097231:-1:exon
so has part: feature:4086015-4086150:-1:exon
so has part: feature:4084315-4084395:-1:exon
so has part: feature:4054337-4054482:-1:exon
so has part: feature:4053656-4053803:-1:exon
so has part: feature:4052151-4052294:-1:exon
so has part: feature:4049054-4049119:-1:exon
so has part: feature:4040013-4041024:-1:exon

position:4201947:-1
position: 4201947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4201880-4201947:-1:exon

position:4201880:-1
position: 4201880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4165266-4165381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4125843-4125974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100617-4100772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097059-4097231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4086015-4086150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4084315-4084395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054337-4054482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4053656-4053803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4052151-4052294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4049054-4049119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4040013-4041024:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_032124110.1
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(4040013..4041024,4049054..4049119,4052151..4052294,4053656..4053803,4054337..4054482,4084315..4084395,4086015..4086150,4097059..4097231,4100617..4100772,4125843..4125974,4165266..4165381,4186215..4186387))
location: region:4040013-4186387:-1
so has part: feature:4186215-4186387:-1:exon
so has part: feature:4165266-4165381:-1:exon
so has part: feature:4125843-4125974:-1:exon
so has part: feature:4100617-4100772:-1:exon
so has part: feature:4097059-4097231:-1:exon
so has part: feature:4086015-4086150:-1:exon
so has part: feature:4084315-4084395:-1:exon
so has part: feature:4054337-4054482:-1:exon
so has part: feature:4053656-4053803:-1:exon
so has part: feature:4052151-4052294:-1:exon
so has part: feature:4049054-4049119:-1:exon
so has part: feature:4040013-4041024:-1:exon

position:4186387:-1
position: 4186387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4186215-4186387:-1:exon

position:4186215:-1
position: 4186215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4165266-4165381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4125843-4125974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100617-4100772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097059-4097231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4086015-4086150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4084315-4084395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054337-4054482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4053656-4053803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4052151-4052294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4049054-4049119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4040013-4041024:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X2
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(4040987..4041024,4049054..4049119,4052175..4052294,4053656..4053803,4054337..4054482,4084315..4084395,4086015..4086150,4097059..4097231,4100617..4100772,4125843..4125974,4165266..4165381,4289526..4290013))
location: region:4040987-4290013:-1
so has part: feature:4289526-4290013:-1:exon
so has part: feature:4165266-4165381:-1:exon
so has part: feature:4125843-4125974:-1:exon
so has part: feature:4100617-4100772:-1:exon
so has part: feature:4097059-4097231:-1:exon
so has part: feature:4086015-4086150:-1:exon
so has part: feature:4084315-4084395:-1:exon
so has part: feature:4054337-4054482:-1:exon
so has part: feature:4053656-4053803:-1:exon
so has part: feature:4052175-4052294:-1:exon
so has part: feature:4049054-4049119:-1:exon
so has part: feature:4040987-4041024:-1:exon

XP_031979999.1
type: Protein
SIO_000068: ncbiprotein

position:4040987:-1
position: 4040987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4290013:-1
position: 4290013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4289526-4290013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4165266-4165381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4125843-4125974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100617-4100772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097059-4097231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4086015-4086150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4084315-4084395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054337-4054482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4053656-4053803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4052175-4052294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4049054-4049119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4040987-4041024:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X1
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(4040987..4041024,4049054..4049119,4052151..4052294,4053656..4053803,4054337..4054482,4084315..4084395,4086015..4086150,4097059..4097231,4100617..4100772,4125843..4125974,4165266..4165381,4289526..4290013))
location: region:4040987-4290013:-1
so has part: feature:4289526-4290013:-1:exon
so has part: feature:4165266-4165381:-1:exon
so has part: feature:4125843-4125974:-1:exon
so has part: feature:4100617-4100772:-1:exon
so has part: feature:4097059-4097231:-1:exon
so has part: feature:4086015-4086150:-1:exon
so has part: feature:4084315-4084395:-1:exon
so has part: feature:4054337-4054482:-1:exon
so has part: feature:4053656-4053803:-1:exon
so has part: feature:4052151-4052294:-1:exon
so has part: feature:4049054-4049119:-1:exon
so has part: feature:4040987-4041024:-1:exon

XP_031979997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4289526-4290013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4165266-4165381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4125843-4125974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100617-4100772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097059-4097231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4086015-4086150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4084315-4084395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054337-4054482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4053656-4053803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4052151-4052294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4049054-4049119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4040987-4041024:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X3
translation: MLAPLEGHQSGRDPCGFSSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(4040987..4041024,4049054..4049119,4052151..4052294,4053656..4053803,4054337..4054482,4084315..4084395,4086015..4086150,4097059..4097231,4100617..4100772,4125843..4125974,4165266..4165381,4201880..4201932))
location: region:4040987-4201932:-1
so has part: feature:4201880-4201932:-1:exon
so has part: feature:4165266-4165381:-1:exon
so has part: feature:4125843-4125974:-1:exon
so has part: feature:4100617-4100772:-1:exon
so has part: feature:4097059-4097231:-1:exon
so has part: feature:4086015-4086150:-1:exon
so has part: feature:4084315-4084395:-1:exon
so has part: feature:4054337-4054482:-1:exon
so has part: feature:4053656-4053803:-1:exon
so has part: feature:4052151-4052294:-1:exon
so has part: feature:4049054-4049119:-1:exon
so has part: feature:4040987-4041024:-1:exon

XP_031980000.1
type: Protein
SIO_000068: ncbiprotein

position:4201932:-1
position: 4201932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4201880-4201932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4165266-4165381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4125843-4125974:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4100617-4100772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4097059-4097231:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4086015-4086150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4084315-4084395:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4054337-4054482:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4053656-4053803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4052151-4052294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4049054-4049119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4040987-4041024:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 1196302
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X4
translation: MAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(4040987..4041024,4049054..4049119,4052151..4052294,4053656..4053803,4054337..4054482,4084315..4084395,4086015..4086150,4097059..4097231,4100617..4100772,4125843..4125957))
location: region:4040987-4125957:-1
so has part: feature:4125843-4125957:-1:exon
so has part: feature:4100617-4100772:-1:exon
so has part: feature:4097059-4097231:-1:exon
so has part: feature:4086015-4086150:-1:exon
so has part: feature:4084315-4084395:-1:exon
so has part: feature:4054337-4054482:-1:exon
so has part: feature:4053656-4053803:-1:exon
so has part: feature:4052151-4052294:-1:exon
so has part: feature:4049054-4049119:-1:exon
so has part: feature:4040987-4041024:-1:exon

XP_031980001.1
type: Protein
SIO_000068: ncbiprotein

position:4125957:-1
position: 4125957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4125843-4125957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4100617-4100772:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4097059-4097231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4086015-4086150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4084315-4084395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4054337-4054482:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4053656-4053803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4052151-4052294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4049054-4049119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4040987-4041024:-1:exon

LOC116450858
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: LOC116450858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4293874..4307591)
location: region:4293874-4307591:-1
so has part: feature:4293874-4307591:-1:exon
subclass of: SO_0000011

116450858
type: Gene
SIO_000068: ncbigene

position:4293874:-1
position: 4293874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4307591:-1
position: 4307591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4293874-4307591:-1:exon

LOC116450858
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 1196302
nc RNA class: lncRNA
gene: LOC116450858
product: uncharacterized LOC116450858
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XR_004242989.1
SIO_010081: LOC116450858
subclass of: SO_0000673
so part of: LOC116450858
location: complement(join(4293874..4294854,4297640..4297755,4307383..4307591))
location: region:4293874-4307591:-1
so has part: feature:4307383-4307591:-1:exon
so has part: feature:4297640-4297755:-1:exon
so has part: feature:4293874-4294854:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4307383-4307591:-1:exon

position:4307383:-1
position: 4307383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4297640-4297755:-1:exon

position:4297640:-1
position: 4297640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4297755:-1
position: 4297755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4293874-4294854:-1:exon

position:4294854:-1
position: 4294854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHM
type: Gene
subclass of: SO_0000704
RO_0002162: 1196302
gene: CHM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4307614..4368346
location: region:4307614-4368346:1
so has part: feature:4307614-4368346:1:exon
subclass of: SO_0000010

116450856
type: Gene
SIO_000068: ncbigene

position:4307614:1
position: 4307614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4368346:1
position: 4368346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4307614-4368346:1:exon

CHM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 1196302
gene: CHM
product: CHM Rab escort protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032123740.1
SIO_010081: CHM
subclass of: SO_0000673
so part of: CHM
location: join(4307614..4307711,4318302..4318368,4324073..4324145,4325297..4325421,4329097..4329514,4330631..4330747,4331396..4331516,4333916..4334141,4345444..4345521,4350381..4350485,4351401..4351464,4352076..4352172,4354462..4354554,4357133..4357299,4361676..4361844,4364511..4368346)
location: region:4307614-4368346:1
so has part: feature:4307614-4307711:1:exon
so has part: feature:4318302-4318368:1:exon
so has part: feature:4324073-4324145:1:exon
so has part: feature:4325297-4325421:1:exon
so has part: feature:4329097-4329514:1:exon
so has part: feature:4330631-4330747:1:exon
so has part: feature:4331396-4331516:1:exon
so has part: feature:4333916-4334141:1:exon
so has part: feature:4345444-4345521:1:exon
so has part: feature:4350381-4350485:1:exon
so has part: feature:4351401-4351464:1:exon
so has part: feature:4352076-4352172:1:exon
so has part: feature:4354462-4354554:1:exon
so has part: feature:4357133-4357299:1:exon
so has part: feature:4361676-4361844:1:exon
so has part: feature:4364511-4368346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4307614-4307711:1:exon

position:4307711:1
position: 4307711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4318302-4318368:1:exon

position:4318302:1
position: 4318302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4318368:1
position: 4318368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4324073-4324145:1:exon

position:4324073:1
position: 4324073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4324145:1
position: 4324145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4325297-4325421:1:exon

position:4325297:1
position: 4325297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4325421:1
position: 4325421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4329097-4329514:1:exon

position:4329097:1
position: 4329097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4329514:1
position: 4329514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4330631-4330747:1:exon

position:4330631:1
position: 4330631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4330747:1
position: 4330747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4331396-4331516:1:exon

position:4331396:1
position: 4331396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4331516:1
position: 4331516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition