Pseudobdellovibrio exovorus JSS, complete sequence.
Bacteria; Bdellovibrionota; Bdellovibrionia; Bdellovibrionales; Pseudobdellovibrionaceae; Pseudobdellovibrio.
By their genes ye shall know them: genomic signatures of predatory bacteria
Submitted (10-MAY-2012) Molecular Genetics, Weizmann Institute of Science, 234 Herzl St., Rehovot 76100, Israel
REFSEQ INFORMATION: The reference sequence is identical to\nCP003537.1.\nSource DNA and bacteria are available from Edouard Jurkevitch's\nlab's culture collection, at the Department of Plant Pathology and\nMicrobiology, Faculty of Agriculture, Food and Environment, The\nHebrew University of Jerusalem 76100, Rehovot, Israel.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/11/2023 01:35:52\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,639\nCDSs (total) :: 2,600\nGenes (coding) :: 2,595\nCDSs (with protein) :: 2,595\nGenes (RNA) :: 39\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 33\nncRNAs :: 3\nPseudo Genes (total) :: 5\nCDSs (without protein) :: 5\nPseudo Genes (ambiguous residues) :: 0 of 5\nPseudo Genes (frameshifted) :: 0 of 5\nPseudo Genes (incomplete) :: 5 of 5\nPseudo Genes (internal stop) :: 0 of 5\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_011162626.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_011162627.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00611.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015466756.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_011162630.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF024299.2
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_015089219.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162635.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089223.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162640.1
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: protein motif:HMM:NF025010.2
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162643.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162644.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089229.1
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089230.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011162647.1
succinate dehydrogenase cytochrome b subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011162648.1
fumarate reductase/succinate dehydrogenase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015089233.1
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF024854.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162650.1
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089236.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089238.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: similar to AA sequence:RefSeq:WP_015089240.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: protein motif:HMM:TIGR02147.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015468749.1
COORDINATES: similar to AA sequence:RefSeq:WP_015468748.1
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: similar to AA sequence:RefSeq:WP_015468758.1
thrombospondin type-1 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165948.1
COORDINATES: similar to AA sequence:RefSeq:WP_015468752.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089244.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014950.2
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF024747.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091436.1
COORDINATES: protein motif:HMM:NF016268.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162664.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089248.1
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF012904.2
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF013293.2
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
dihydrodipicolinate reductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011162672.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025120.2
carboxypeptidase-like regulatory domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089257.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_011162676.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091793.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162677.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089260.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089261.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_011162681.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_011162682.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: protein motif:HMM:NF014678.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162686.1
COORDINATES: similar to AA sequence:RefSeq:WP_014101577.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: protein motif:HMM:NF024852.2
COORDINATES: similar to AA sequence:RefSeq:WP_005418951.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089271.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014102175.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162698.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF013540.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF018242.2
COORDINATES: protein motif:HMM:NF022633.2
COORDINATES: protein motif:HMM:NF024122.2
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF016701.2
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: similar to AA sequence:RefSeq:WP_015466687.1
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:NF014336.2
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092745.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166093.1
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:NF014244.2
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092739.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092738.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005328724.1
GO:0033862 - UMP kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166085.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166084.1
COORDINATES: protein motif:HMM:NF012318.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024842.2
COORDINATES: similar to AA sequence:RefSeq:WP_011166081.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166080.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089334.1
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024792.2
COORDINATES: protein motif:HMM:NF015647.2
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162765.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089343.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015089346.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162770.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089348.1
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092704.1
COORDINATES: protein motif:HMM:TIGR00843.1
GO:0042925 - benzoate transmembrane transporter activity [Evidence IEA]
GO:0042919 - benzoate transport [Evidence IEA]
benzoate/H(+) symporter BenE family transporter
COORDINATES: protein motif:HMM:NF013304.2
COORDINATES: protein motif:HMM:NF012273.2
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:NF015970.2
COORDINATES: protein motif:HMM:NF012636.2
COORDINATES: protein motif:HMM:NF014012.2
COORDINATES: protein motif:HMM:NF015993.2
GO:0015075 - monoatomic ion transmembrane transporter activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
monovalent cation/H+ antiporter complex subunit F
COORDINATES: protein motif:HMM:TIGR01300.1
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0098662 - inorganic cation transmembrane transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation/H(+) antiporter subunit G
COORDINATES: protein motif:HMM:NF018840.2
COORDINATES: similar to AA sequence:RefSeq:WP_011166050.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011166054.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015467761.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_010919829.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011166060.1
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092720.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: similar to AA sequence:RefSeq:WP_011166069.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162779.1
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:NF037183.2
permease-like cell division protein FtsX
COORDINATES: similar to AA sequence:RefSeq:WP_011162776.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016241.2
COORDINATES: protein motif:HMM:TIGR00220.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
large conductance mechanosensitive channel protein MscL
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_011166042.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166041.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166040.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166039.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_015092698.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092678.1
GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:NF024811.2
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011805414.1
COORDINATES: protein motif:HMM:NF037510.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF024706.2
COORDINATES: protein motif:HMM:NF014442.2
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF025203.2
GO:0005509 - calcium ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019421.2
type II toxin-antitoxin system HipA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_003056165.1
COORDINATES: protein motif:HMM:NF018431.2
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF018663.2
COORDINATES: protein motif:HMM:NF039714.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090305.1
COORDINATES: protein motif:HMM:NF015047.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165198.1
COORDINATES: protein motif:HMM:NF016817.2
COORDINATES: protein motif:HMM:NF038065.1
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090031.1
COORDINATES: protein motif:HMM:NF020037.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165995.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091307.1
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation:proton antiporter-2 (CPA2) family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089510.1
COORDINATES: protein motif:HMM:NF016221.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092242.1
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF001159.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165221.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165844.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091685.1
zinc ribbon domain-containing protein YjdM
COORDINATES: similar to AA sequence:RefSeq:WP_011165612.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163798.1
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163800.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163801.1
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF014624.2
metal/formaldehyde-sensitive transcriptional repressor
COORDINATES: protein motif:HMM:NF033827.1
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
CDF family Co(II)/Ni(II) efflux transporter DmeF
COORDINATES: protein motif:HMM:NF018893.2
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165969.1
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF017819.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090039.1
fibronectin type III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015090377.1
COORDINATES: protein motif:HMM:NF016855.2
TfoX/Sxy family DNA transformation protein
COORDINATES: protein motif:HMM:NF014600.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF003768.0
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF012696.2
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF024057.2
COORDINATES: protein motif:HMM:NF013868.2
COORDINATES: protein motif:HMM:NF025070.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164828.1
COORDINATES: protein motif:HMM:NF013867.2
protein-glutamate O-methyltransferase CheR
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF001965.0
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
chemotaxis-specific protein-glutamate methyltransferase CheB
COORDINATES: protein motif:HMM:NF012245.2
PAS domain-containing methyl-accepting chemotaxis protein
COORDINATES: protein motif:HMM:NF013731.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF022596.2
COORDINATES: protein motif:HMM:NF025892.2
COORDINATES: protein motif:HMM:NF013222.2
COORDINATES: protein motif:HMM:NF019301.2
COORDINATES: similar to AA sequence:RefSeq:WP_014101864.1
COORDINATES: protein motif:HMM:NF017475.2
COORDINATES: protein motif:HMM:NF013782.2
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016818.2
COORDINATES: similar to AA sequence:RefSeq:WP_015089444.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Ada metal-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089443.1
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF013488.2
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163434.1
COORDINATES: protein motif:HMM:TIGR03558.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015092198.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:TIGR00048.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013352894.1
COORDINATES: protein motif:HMM:NF036804.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090303.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090304.1
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF027567.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:NF023390.2
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF021497.2
COORDINATES: protein motif:HMM:NF012436.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092025.1
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163929.1
COORDINATES: protein motif:HMM:NF017353.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091232.1
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: similar to AA sequence:RefSeq:WP_000290139.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF027592.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163775.1
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: protein motif:HMM:NF013440.2
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165059.1
GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
GO:0036297 - interstrand cross-link repair [Evidence IEA]
crosslink repair DNA glycosylase YcaQ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089392.1
COORDINATES: protein motif:HMM:NF015935.2
COORDINATES: similar to AA sequence:RefSeq:WP_015089403.1
penicillin-binding protein activator LpoB
COORDINATES: similar to AA sequence:RefSeq:WP_011162824.1
polyhydroxyalkanoate synthesis regulator DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF025490.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162829.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162830.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089411.1
COORDINATES: protein motif:HMM:NF013422.2
COORDINATES: protein motif:HMM:NF013087.2
COORDINATES: protein motif:HMM:NF008113.2
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162839.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162840.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162841.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF004208.0
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02683.1
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF016330.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019454693.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090581.1
COORDINATES: protein motif:HMM:NF004042.0
bifunctional methionine sulfoxide reductase B/A protein
COORDINATES: protein motif:HMM:NF017897.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090575.1
COORDINATES: protein motif:HMM:NF025054.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021438.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164297.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090949.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162865.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089460.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162869.1
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011162870.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162882.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162884.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089477.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_015089478.1
cytochrome c oxidase subunit 3 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011162887.1
cytochrome C oxidase subunit IV family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089480.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089481.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024957.2
COORDINATES: similar to AA sequence:RefSeq:WP_014101838.1
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165015.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089489.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164586.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162900.1
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015092504.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF012471.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165831.1
COORDINATES: similar to AA sequence:RefSeq:WP_016181840.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092553.1
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF012706.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_018764411.1
GO:0015267 - channel activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166031.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0006102 - isocitrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013887.2
3-dehydroquinate synthase family protein
COORDINATES: protein motif:HMM:NF012497.2
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF020090.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165823.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092241.1
COORDINATES: protein motif:HMM:NF016146.2
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165817.1
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: similar to AA sequence:RefSeq:WP_015092479.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012640.2
COORDINATES: protein motif:HMM:TIGR00173.1
GO:0070204 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011165810.1
GO:0004177 - aminopeptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165806.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165805.1
transketolase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165794.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165792.1
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092435.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092434.1
GO:0008783 - agmatinase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003464967.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_011163010.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163011.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163012.1
GO:0008997 - ribonuclease R activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00914.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089623.1
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_015089627.1
BMP family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163035.1
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: similar to AA sequence:RefSeq:WP_015089635.1
2-oxoglutarate and iron-dependent oxygenase domain-containing protein
COORDINATES: protein motif:HMM:NF003842.0
COORDINATES: similar to AA sequence:RefSeq:WP_015089640.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163044.1
COORDINATES: protein motif:HMM:TIGR00251.3
COORDINATES: similar to AA sequence:RefSeq:WP_011163047.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089647.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163049.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_015089651.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089652.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163054.1
COORDINATES: protein motif:HMM:NF028007.2
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013080.2
GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163060.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163061.1
COORDINATES: protein motif:HMM:NF013921.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089662.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089663.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015089664.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089670.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020063210.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164902.1
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089680.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: similar to AA sequence:RefSeq:WP_015089688.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163091.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163092.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015089696.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089700.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089701.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163108.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163109.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: protein motif:HMM:NF014195.2
GO:0009427 - bacterial-type flagellum basal body, distal rod, L ring [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
flagellar basal body L-ring protein FlgH
COORDINATES: similar to AA sequence:RefSeq:WP_015089706.1
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163114.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: similar to AA sequence:RefSeq:WP_015089708.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163116.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
COORDINATES: protein motif:HMM:NF013702.2
COORDINATES: protein motif:HMM:TIGR00202.1
GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163118.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163120.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089714.1
GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
1,4-dihydroxy-2-naphthoate octaprenyltransferase
COORDINATES: protein motif:HMM:NF012711.2
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF013100.2
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF016271.2
COORDINATES: protein motif:HMM:NF012393.2
COORDINATES: protein motif:HMM:NF024765.2
COORDINATES: protein motif:HMM:NF015298.2
septal ring lytic transglycosylase RlpA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165477.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF015863.2
PepSY-associated TM helix domain-containing protein
COORDINATES: protein motif:HMM:NF016032.2
GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA]
glutamate-cysteine ligase family protein
COORDINATES: protein motif:HMM:NF019850.2
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:NF024628.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092351.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165684.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092343.1
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092342.1
COORDINATES: similar to AA sequence:RefSeq:WP_015470137.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092336.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015092335.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092334.1
COORDINATES: protein motif:HMM:NF016250.2
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165671.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: similar to AA sequence:RefSeq:WP_011165670.1
COORDINATES: protein motif:HMM:TIGR01400.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165668.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092330.1
COORDINATES: protein motif:HMM:TIGR03499.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF012369.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165664.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_015092325.1
COORDINATES: protein motif:HMM:NF021188.2
polyhydroxyalkanoic acid system family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015092323.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF012485.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092317.1
hybrid sensor histidine kinase/response regulator
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: protein motif:HMM:NF014881.2
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011165643.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: protein motif:HMM:NF025217.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF012861.2
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02227.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF021082.2
COORDINATES: protein motif:HMM:NF039524.1
COORDINATES: protein motif:HMM:NF012264.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024834.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF019268.2
COORDINATES: protein motif:HMM:TIGR00680.1
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
potassium-transporting ATPase subunit KdpA
COORDINATES: protein motif:HMM:TIGR01497.1
potassium-transporting ATPase subunit KdpB
COORDINATES: protein motif:HMM:NF001454.0
potassium-transporting ATPase subunit KdpC
COORDINATES: protein motif:HMM:NF014728.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163245.1
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089840.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:NF020804.2
GO:0008168 - methyltransferase activity [Evidence IEA]
small ribosomal subunit Rsm22 family protein
COORDINATES: protein motif:HMM:NF013257.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163253.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089855.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163263.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163272.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089863.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163275.1
(deoxy)nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_015089865.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006222 - UMP biosynthetic process [Evidence IEA]
quinone-dependent dihydroorotate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011163277.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089868.1
alpha-ketoglutarate-dependent dioxygenase AlkB
COORDINATES: protein motif:HMM:TIGR02198.1
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
D-glycero-beta-D-manno-heptose-7-phosphate kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011163292.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163293.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163299.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089891.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163302.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF021535.2
COORDINATES: protein motif:HMM:TIGR01352.1
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163318.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163320.1
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: similar to AA sequence:RefSeq:WP_038451513.1
GO:0016979 - lipoate-protein ligase activity [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089923.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163333.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00510.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164477.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163335.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163341.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163343.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163344.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163345.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163346.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089937.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089943.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF015693.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163356.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089947.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_015089948.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015089949.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163360.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_015089970.1
COORDINATES: protein motif:HMM:TIGR04565.1
outer membrane beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163384.1
AgmX/PglI C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163385.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163386.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089980.1
COORDINATES: protein motif:HMM:NF018537.2
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter periplasmic protein LptC
COORDINATES: similar to AA sequence:RefSeq:WP_014101726.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163390.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089985.1
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163395.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_017370549.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_038451587.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163399.1
COORDINATES: protein motif:HMM:NF002032.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011163403.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF009455.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:NF024376.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0043168 - anion binding [Evidence IEA]; GO:0043225 - ATPase-coupled inorganic anion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090001.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163410.1
GO:0009297 - pilus assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: protein motif:HMM:NF016254.2
COORDINATES: protein motif:HMM:TIGR02515.1
GO:0009297 - pilus assembly [Evidence IEA]; GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF013838.2
FliG C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012958.2
GO:0005576 - extracellular region [Evidence IEA]
COORDINATES: protein motif:HMM:NF024779.2
COORDINATES: protein motif:HMM:NF012593.2
dicarboxylate/amino acid:cation symporter
COORDINATES: similar to AA sequence:RefSeq:WP_011163482.1
COORDINATES: protein motif:HMM:NF013026.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090065.1
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015090069.1
electron transfer flavoprotein-ubiquinone oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015090070.1
COORDINATES: protein motif:HMM:TIGR01853.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011163494.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163495.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090085.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163504.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163505.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090088.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163785.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163510.1
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011163511.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090093.1
COORDINATES: protein motif:HMM:TIGR00526.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01496.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01499.1
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163516.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163518.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090101.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090102.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF015546.2
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: similar to AA sequence:RefSeq:WP_011163543.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090125.1
GO:0009358 - polyphosphate kinase complex [Evidence IEA]
GO:0008976 - polyphosphate kinase activity [Evidence IEA]
GO:0006799 - polyphosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090131.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: protein motif:HMM:NF013362.2
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF017482.2
NFACT RNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163557.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163558.1
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163561.1
COORDINATES: protein motif:HMM:NF016163.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163567.1
COORDINATES: protein motif:HMM:NF033768.1
COORDINATES: protein motif:HMM:TIGR00810.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090152.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024575.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163574.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163580.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_015090161.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090162.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163586.1
GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]
GO:0006549 - isoleucine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163591.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163592.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090176.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090177.1
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090179.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163600.1
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF015679.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015469725.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090188.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163619.1
pyruvate, water dikinase regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163622.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_011163623.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163625.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165822.1
GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090202.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_011163519.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163631.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090208.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163634.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163635.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090218.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162835.1
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF004326.0
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF013232.2
MTAP family purine nucleoside phosphorylase
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165187.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: protein motif:HMM:NF021429.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162934.1
YajQ family cyclic di-GMP-binding protein
COORDINATES: protein motif:HMM:NF014997.2
COORDINATES: protein motif:HMM:NF013524.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165185.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091834.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165182.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165180.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091830.1
COORDINATES: protein motif:HMM:NF019339.2
COORDINATES: protein motif:HMM:NF024973.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163648.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011163906.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090290.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163664.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163667.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: protein motif:HMM:NF012437.2
GO:0009190 - cyclic nucleotide biosynthetic process [Evidence IEA]; GO:0035556 - intracellular signal transduction [Evidence IEA]
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163955.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_015090119.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163541.1
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF014216.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014661.2
COORDINATES: protein motif:HMM:TIGR01573.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03639.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type II CRISPR-associated endonuclease Cas1
COORDINATES: protein motif:HMM:TIGR01865.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
Cas9, originally named Csn1, is the large, multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II CRISPR RNA-guided endonuclease Cas9
COORDINATES: similar to AA sequence:RefSeq:WP_144313807.1
GO:0003747 - translation release factor activity [Evidence IEA]
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011163974.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163975.1
COORDINATES: protein motif:HMM:TIGR03303.1
GO:0009279 - cell outer membrane [Evidence IEA]
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_015090637.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163978.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090640.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015251.2
lipid A biosynthesis lauroyl acyltransferase
COORDINATES: protein motif:HMM:NF022750.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163987.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090648.1
COORDINATES: protein motif:HMM:NF004160.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: similar to AA sequence:RefSeq:WP_015090652.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090654.1
COORDINATES: similar to AA sequence:RefSeq:WP_015469639.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091620.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164968.1
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011164967.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013624.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091609.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164955.1
COORDINATES: protein motif:HMM:NF013079.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091602.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091601.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091599.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091579.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164924.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014664.2
GO:0051920 - peroxiredoxin activity [Evidence IEA]
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF013694.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164914.1
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
bifunctional 2-methylcitrate synthase/citrate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_015091560.1
GO:0046421 - methylisocitrate lyase activity [Evidence IEA]
GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091559.1
COORDINATES: protein motif:HMM:NF013283.2
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF016260.2
GO:0009306 - protein secretion [Evidence IEA]
translocation/assembly module TamB domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011164897.1
COORDINATES: protein motif:HMM:NF020855.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091549.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: similar to AA sequence:RefSeq:WP_011164894.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_001837006.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_015091544.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: similar to AA sequence:RefSeq:WP_015469676.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF014533.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164880.1
LPS export ABC transporter permease LptF
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164872.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164871.1
COORDINATES: protein motif:HMM:TIGR00219.1
SurA N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011164863.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164860.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164858.1
COORDINATES: protein motif:HMM:NF010620.0
COORDINATES: similar to AA sequence:RefSeq:WP_015091503.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164838.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164837.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164831.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013616632.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091480.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091466.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164807.1
COORDINATES: protein motif:HMM:NF038402.1
COORDINATES: protein motif:HMM:NF016311.2
glycosyltransferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011164787.1
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: protein motif:HMM:NF040322.1
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164778.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091429.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164775.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_011164770.1
GO:0008612 - peptidyl-lysine modification to peptidyl-hypusine [Evidence IEA]
phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015469552.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091415.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164761.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164760.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015039.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091400.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091397.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015406.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091394.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164744.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164743.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164742.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF022525.2
COORDINATES: protein motif:HMM:NF015272.2
GO:0020037 - heme binding [Evidence IEA]; GO:0004833 - tryptophan 2,3-dioxygenase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
tryptophan 2,3-dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165424.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_015091387.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164737.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090385.1
GO:0008714 - AMP nucleosidase activity [Evidence IEA]
GO:0044209 - AMP salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091376.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF013260.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162919.1
COORDINATES: protein motif:HMM:NF020495.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165568.1
COORDINATES: protein motif:HMM:NF014669.2
GO:0015225 - biotin transmembrane transporter activity [Evidence IEA]
GO:0015878 - biotin transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF027219.2
COORDINATES: protein motif:HMM:NF019121.2
COORDINATES: protein motif:HMM:NF036911.2
protein-glutamine glutaminase family protein
COORDINATES: protein motif:HMM:NF017464.2
COORDINATES: similar to AA sequence:RefSeq:WP_015089451.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091246.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091247.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163708.1
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012546.2
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF025059.2
COORDINATES: protein motif:HMM:NF019151.2
COORDINATES: protein motif:HMM:NF037007.2
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090915.1
COORDINATES: protein motif:HMM:NF013517.2
GO:0009055 - electron transfer activity [Evidence IEA]
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090918.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090920.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164272.1
GO:0016829 - lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012703.2
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164286.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164287.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164291.1
COORDINATES: protein motif:HMM:NF013665.2
COORDINATES: similar to AA sequence:RefSeq:WP_002443355.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090946.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164296.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF017076.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164303.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164308.1
GO:0070403 - NAD+ binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090960.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164310.1
GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013618.2
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164315.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164316.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015090968.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090969.1
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164322.1
COORDINATES: protein motif:HMM:NF024831.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011164423.1
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164531.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF027363.2
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090881.1
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090890.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015090891.1
COORDINATES: protein motif:HMM:TIGR01048.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015376.2
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
penicillin-insensitive murein endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_015090893.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164243.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091886.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089803.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091856.1
COORDINATES: protein motif:HMM:TIGR01428.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162660.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015089507.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089871.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163890.1
COORDINATES: protein motif:HMM:TIGR00008.1
COORDINATES: protein motif:HMM:NF013331.2
COORDINATES: protein motif:HMM:NF017727.2
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF028240.2
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: protein motif:HMM:NF018508.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165305.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF018352.2
COORDINATES: protein motif:HMM:NF033550.5
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019344.2
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:NF018877.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:NF020892.2
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165985.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091138.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
YjjG family noncanonical pyrimidine nucleotidase
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF024878.2
COORDINATES: similar to AA sequence:RefSeq:WP_014102025.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_011164250.1
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:NF039309.1
COORDINATES: protein motif:HMM:TIGR01494.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165006.1
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cbb3-type cytochrome oxidase assembly protein CcoS
COORDINATES: similar to AA sequence:RefSeq:WP_011165007.1
cytochrome-c oxidase, cbb3-type subunit I
COORDINATES: similar to AA sequence:RefSeq:WP_015091646.1
cbb3-type cytochrome c oxidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02745.1
cytochrome c oxidase accessory protein CcoG
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF016028.2
COORDINATES: protein motif:HMM:NF012532.2
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_015091284.1
GO:0004416 - hydroxyacylglutathione hydrolase activity [Evidence IEA]
GO:0019243 - methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [Evidence IEA]
COORDINATES: protein motif:HMM:NF022664.2
COORDINATES: protein motif:HMM:TIGR00233.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021639.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: similar to AA sequence:RefSeq:WP_015089323.1
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164573.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164572.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164571.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091214.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164566.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005606737.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164564.1
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00088.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_015091206.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164560.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091204.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014119.2
COORDINATES: protein motif:HMM:NF016348.2
GO:0061024 - membrane organization [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
COORDINATES: protein motif:HMM:NF024853.2
vitamin K epoxide reductase family protein
COORDINATES: protein motif:HMM:NF016103.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165719.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164544.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164542.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091186.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164540.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164538.1
COORDINATES: protein motif:HMM:NF016176.2
COORDINATES: protein motif:HMM:NF019040.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164533.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:NF014618.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091174.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091173.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091172.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164525.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00214.1
COORDINATES: protein motif:HMM:NF024778.2
COORDINATES: protein motif:HMM:NF006718.0
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091157.1
GO:0035438 - cyclic-di-GMP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017743.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF015983.2
radical SAM/SPASM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011164481.1
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164478.1
COORDINATES: protein motif:HMM:TIGR02466.1
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091114.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164464.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164463.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164462.1
GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]
3-oxoacyl-[acyl-carrier-protein] reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011164461.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091110.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091109.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164458.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164457.1
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF017266.2
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164437.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011164436.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015091085.1
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011164429.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164428.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164427.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164918.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164425.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164419.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164417.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091066.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011164413.1
COORDINATES: protein motif:HMM:NF021466.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164408.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164406.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00688.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091056.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_015091055.1
COORDINATES: protein motif:HMM:NF014114.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091053.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164397.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091049.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164395.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02191.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091046.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_015091045.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: protein motif:HMM:TIGR00150.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_015091038.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164384.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091036.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164382.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091035.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091030.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091027.1
COORDINATES: similar to AA sequence:RefSeq:WP_020059785.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091025.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164370.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF025017.2
COORDINATES: protein motif:HMM:NF024896.2
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF021616.2
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015091263.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164613.1
COORDINATES: protein motif:HMM:NF002211.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: protein motif:HMM:NF008745.0
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164626.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290536.1
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011164628.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164629.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164630.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164633.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: similar to AA sequence:RefSeq:WP_014103132.1
COORDINATES: protein motif:HMM:TIGR01777.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091287.1
COORDINATES: protein motif:HMM:NF014665.2
GO:0006784 - heme A biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016056.2
DCC1-like thiol-disulfide oxidoreductase family protein
COORDINATES: protein motif:HMM:NF026165.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164654.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091308.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091309.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164665.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_011164666.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164667.1
COORDINATES: protein motif:HMM:TIGR00739.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164669.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091315.1
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
COORDINATES: protein motif:HMM:NF019045.2
COORDINATES: protein motif:HMM:NF017197.2
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015469845.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162904.1
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090857.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164204.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164203.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00104.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164186.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164181.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF024252.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01179.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164172.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:TIGR03570.1
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: protein motif:HMM:NF014908.2
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090976.1
GO:0019180 - dTDP-4-amino-4,6-dideoxygalactose transaminase activity [Evidence IEA]
GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
dTDP-4-amino-4,6-dideoxygalactose transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_002221803.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:TIGR01181.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03026.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: protein motif:HMM:NF015674.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092729.1
UTP--glucose-1-phosphate uridylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011164136.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_011164135.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164134.1
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_011165320.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_015090774.1
COORDINATES: similar to AA sequence:RefSeq:WP_014102554.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164115.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164114.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_015090771.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090707.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164108.1
COORDINATES: protein motif:HMM:NF037336.2
COORDINATES: similar to AA sequence:RefSeq:WP_011164105.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase, degradative
COORDINATES: protein motif:HMM:TIGR02151.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011164103.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164102.1
COORDINATES: protein motif:HMM:NF025077.2
COORDINATES: protein motif:HMM:TIGR00168.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090757.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164091.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090752.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164089.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164088.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090750.1
TAT-variant-translocated molybdopterin oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_011164086.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090748.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164084.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164083.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090745.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF041515.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164077.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164076.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090737.1
COORDINATES: protein motif:HMM:NF019934.2
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164069.1
COORDINATES: protein motif:HMM:NF023044.2
COORDINATES: protein motif:HMM:NF015867.2
COORDINATES: protein motif:HMM:NF022554.2
COORDINATES: protein motif:HMM:TIGR04411.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164062.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090715.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011164049.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_038448884.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090712.1
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_015090710.1
COORDINATES: protein motif:HMM:NF016764.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090700.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164034.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090699.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090697.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164029.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090694.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164027.1
COORDINATES: protein motif:HMM:NF018449.2
COORDINATES: protein motif:HMM:NF015461.2
COORDINATES: protein motif:HMM:NF024758.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163914.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090564.1
COORDINATES: protein motif:HMM:NF014173.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090009.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_014102624.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165959.1
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090518.1
COORDINATES: similar to AA sequence:RefSeq:WP_011164011.1
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: protein motif:HMM:NF012899.2
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00407.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165191.1
COORDINATES: protein motif:HMM:NF023696.2
COORDINATES: protein motif:HMM:NF013607.2
low molecular weight protein-tyrosine-phosphatase
COORDINATES: protein motif:HMM:NF017532.2
phytanoyl-CoA dioxygenase family protein
COORDINATES: protein motif:HMM:NF038237.1
retron Ec67 family RNA-directed DNA polymerase/endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_015090481.1
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018036870.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163833.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163832.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092608.1
B12-binding domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163827.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: similar to AA sequence:RefSeq:WP_015470925.1
COORDINATES: protein motif:HMM:NF013851.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090459.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090458.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163815.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163814.1
GO:0004333 - fumarate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163813.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090453.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090452.1
tRNA-dihydrouridine synthase family protein
COORDINATES: protein motif:HMM:NF012675.2
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163805.1
COORDINATES: protein motif:HMM:NF014298.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163803.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011163796.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163794.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018285392.1
COORDINATES: similar to AA sequence:RefSeq:WP_014103868.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO:0043335 - protein unfolding [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpA
COORDINATES: similar to AA sequence:RefSeq:WP_011163782.1
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163776.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090418.1
PBECR2 nuclease fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011163764.1
GO:0031012 - extracellular matrix [Evidence IEA]
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163763.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015090402.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090400.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163752.1
COORDINATES: protein motif:HMM:NF013827.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163743.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163740.1
COORDINATES: protein motif:HMM:TIGR00109.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092448.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
oxygen-independent coproporphyrinogen III oxidase
COORDINATES: protein motif:HMM:NF013381.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
uroporphyrinogen decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015092446.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165781.1
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:TIGR00212.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017051.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165778.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004396.0
COORDINATES: protein motif:HMM:NF014345.2
COORDINATES: protein motif:HMM:TIGR00068.2
GO:0004462 - lactoylglutathione lyase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0051596 - methylglyoxal catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090349.1
COORDINATES: protein motif:HMM:NF022137.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163712.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090344.1
COORDINATES: protein motif:HMM:NF013183.2
COORDINATES: protein motif:HMM:NF023853.2
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009897.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: protein motif:HMM:NF005122.0
vitamin B12-dependent ribonucleotide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_015090336.1
iron-sulfur cluster assembly accessory protein
COORDINATES: protein motif:HMM:NF015140.2
GO:0007154 - cell communication [Evidence IEA]
COORDINATES: protein motif:HMM:NF012339.2
2Fe-2S iron-sulfur cluster binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009567413.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163700.1
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090329.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163688.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_011163674.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090614.1
COORDINATES: protein motif:HMM:NF016290.2
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163950.1
alanine--glyoxylate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015090611.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090610.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: protein motif:HMM:NF019540.2
type II toxin-antitoxin system HicA family toxin
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091817.1
COORDINATES: similar to AA sequence:RefSeq:WP_014102804.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163864.1
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014102501.1
GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017833.2
COORDINATES: protein motif:HMM:NF012621.2
heavy metal-associated domain-containing protein
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162700.1
COORDINATES: similar to AA sequence:RefSeq:WP_013811228.1
quaternary ammonium compound efflux SMR transporter SugE
COORDINATES: nucleotide motif:Rfam:14.4:RF01763
guanidine-III (ykkC-III) riboswitch; guanidine riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria; this is a third class of guanidine riboswitches based on ykkC-III RNA motif; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:NF010068.0
heme ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF019459.2
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_015092080.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165427.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162948.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165041.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015090677.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164014.1
COORDINATES: similar to AA sequence:RefSeq:WP_015466691.1
GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011164016.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF024899.2
S1-like domain-containing RNA-binding protein
COORDINATES: protein motif:HMM:NF022426.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090793.1
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF023223.2
DUF3322 and DUF2220 domain-containing protein
COORDINATES: protein motif:HMM:NF024947.2
COORDINATES: protein motif:HMM:NF025205.2
COORDINATES: protein motif:HMM:NF023283.2
COORDINATES: protein motif:HMM:NF016178.2
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024911.2
COORDINATES: protein motif:HMM:NF012562.2
COORDINATES: protein motif:HMM:NF013173.2
GO:0033828 - glucosylglycerol-phosphate synthase activity [Evidence IEA]
GO:0006970 - response to osmotic stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089521.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163018.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163531.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165078.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091720.1
COORDINATES: protein motif:HMM:NF006559.0
COORDINATES: protein motif:HMM:NF025871.2
iron-containing redox enzyme family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015091726.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165088.1
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: similar to AA sequence:RefSeq:WP_014103286.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165095.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165099.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091738.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165107.1
COORDINATES: protein motif:HMM:NF000756.0
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165112.1
COORDINATES: protein motif:HMM:TIGR01224.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165120.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF006914.0
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_000179874.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015091761.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165141.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00730.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165142.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01163.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091783.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091784.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165148.1
LPS export ABC transporter permease LptG
COORDINATES: similar to AA sequence:RefSeq:WP_015091787.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_011165151.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165152.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091792.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165170.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091914.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165248.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091927.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091933.1
BolA/IbaG family iron-sulfur metabolism protein
COORDINATES: similar to AA sequence:RefSeq:WP_003807622.1
COORDINATES: protein motif:HMM:NF022577.2
COORDINATES: similar to AA sequence:RefSeq:WP_015091935.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091937.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165274.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091939.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165276.1
COORDINATES: similar to AA sequence:RefSeq:WP_015091940.1
COORDINATES: protein motif:HMM:NF014021.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF017020.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162713.1
LuxR C-terminal-related transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011162712.1
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011162711.1
COORDINATES: protein motif:HMM:NF024242.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165628.1
COORDINATES: protein motif:HMM:TIGR01511.1
COORDINATES: protein motif:HMM:NF008402.0
COORDINATES: similar to AA sequence:RefSeq:WP_015091604.1
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: protein motif:HMM:NF015077.2
COORDINATES: similar to AA sequence:RefSeq:WP_015469758.1
COORDINATES: similar to AA sequence:RefSeq:WP_015090829.1
COORDINATES: protein motif:HMM:NF003543.0
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015090526.1
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_015091989.1
COORDINATES: protein motif:HMM:TIGR03545.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165327.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_038448232.1
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011165329.1
COORDINATES: similar to AA sequence:RefSeq:WP_007603045.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165331.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_500956.1
COORDINATES: protein motif:HMM:TIGR01351.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091997.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165335.1
COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1
COORDINATES: similar to AA sequence:RefSeq:WP_003194373.1
COORDINATES: similar to AA sequence:RefSeq:WP_017794725.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165339.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165340.1
COORDINATES: similar to AA sequence:RefSeq:WP_004197948.1
COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165343.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165344.1
COORDINATES: similar to AA sequence:RefSeq:WP_003516136.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165346.1
COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1
COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165349.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165350.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092006.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092007.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165353.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165354.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_000246374.1
COORDINATES: similar to AA sequence:RefSeq:WP_015468380.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_015488550.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092015.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165363.1
COORDINATES: similar to AA sequence:RefSeq:WP_002484165.1
COORDINATES: similar to AA sequence:RefSeq:WP_005020265.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_015092019.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165367.1
COORDINATES: protein motif:HMM:NF022439.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092021.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_011165369.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00409.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165406.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092063.1
COORDINATES: protein motif:HMM:TIGR00506.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: protein motif:HMM:TIGR03346.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165687.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165423.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165432.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092086.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163662.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092087.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165448.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092106.1
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165450.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_015092108.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_015092109.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165453.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092111.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092296.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092126.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092127.1
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: similar to AA sequence:RefSeq:WP_015092128.1
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
phosphonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165471.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165473.1
ATP-dependent helicase C-terminal domain-containing protein
fimbria/pilus outer membrane usher protein
COORDINATES: protein motif:HMM:NF012565.2
GO:0071555 - cell wall organization [Evidence IEA]
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165480.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092138.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165484.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165485.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092142.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165487.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165490.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165494.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027637.2
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092166.1
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012298.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165531.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165532.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092193.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165445.1
TerC/Alx family metal homeostasis membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165444.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165548.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165549.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: protein motif:HMM:TIGR00179.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165555.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165556.1
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
COORDINATES: similar to AA sequence:RefSeq:WP_015092220.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165559.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165560.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: similar to AA sequence:RefSeq:WP_011162707.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092225.1
COORDINATES: protein motif:HMM:NF001124.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF014305.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165912.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165913.1
COORDINATES: protein motif:HMM:NF017946.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092234.1
penicillin-binding transpeptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015092235.1
COORDINATES: protein motif:HMM:TIGR00006.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_011165575.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165589.1
COORDINATES: protein motif:HMM:NF014200.2
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: similar to AA sequence:RefSeq:WP_015092260.1
COORDINATES: protein motif:HMM:TIGR00573.1
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092269.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092270.1
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092277.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165620.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092283.1
50S ribosomal protein L11 methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011165622.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165624.1
D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011165627.1
COORDINATES: protein motif:HMM:NF013856.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163203.1
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_015089791.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:NF024572.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163199.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089786.1
COORDINATES: protein motif:HMM:NF022428.2
COORDINATES: similar to AA sequence:RefSeq:WP_011163190.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011163189.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015089779.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_015089769.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163178.1
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015470792.1
COORDINATES: similar to AA sequence:RefSeq:WP_015470791.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163172.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163164.1
COORDINATES: protein motif:HMM:TIGR01254.1
GO:0048502 - ABC-type thiamine transporter activity [Evidence IEA]; GO:0030975 - thiamine binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0030974 - thiamine pyrophosphate transmembrane transport [Evidence IEA]; GO:0015888 - thiamine transport [Evidence IEA]
thiamine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089752.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011163159.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163158.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089747.1
D-alanine--D-alanine ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089744.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089733.1
COORDINATES: protein motif:HMM:NF015147.2
COORDINATES: similar to AA sequence:RefSeq:WP_015089727.1
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016340.2
GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089722.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163128.1
COORDINATES: protein motif:HMM:NF024937.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092367.1
COORDINATES: protein motif:HMM:TIGR00392.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092370.1
COORDINATES: protein motif:HMM:NF013915.2
COORDINATES: similar to AA sequence:RefSeq:WP_009241594.1
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: protein motif:HMM:NF002872.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165721.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092389.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011165723.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290830.1
COORDINATES: similar to AA sequence:RefSeq:WP_013801934.1
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01643.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089862.1
COORDINATES: protein motif:HMM:NF027890.2
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011165731.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165732.1
TIGR02530 family flagellar biosynthesis protein
COORDINATES: protein motif:HMM:NF025230.2
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: similar to AA sequence:RefSeq:WP_011165735.1
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165737.1
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165739.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165740.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: similar to AA sequence:RefSeq:WP_011165741.1
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_015092407.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165743.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165747.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165748.1
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165755.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: similar to AA sequence:RefSeq:WP_011165756.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165760.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_011165761.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: protein motif:HMM:NF012722.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
histidine kinase dimerization/phospho-acceptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165767.1
COORDINATES: protein motif:HMM:NF024836.2
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012345.2
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162939.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162937.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089528.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089525.1
COORDINATES: protein motif:HMM:NF025637.2
COORDINATES: protein motif:HMM:NF018770.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162931.1
COORDINATES: protein motif:HMM:NF013345.2
COORDINATES: protein motif:HMM:NF012935.2
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: protein motif:HMM:NF022447.2
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162999.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162997.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089590.1
COORDINATES: protein motif:HMM:NF024743.2
DUF4097 family beta strand repeat-containing protein
COORDINATES: protein motif:HMM:NF019618.2
COORDINATES: similar to AA sequence:RefSeq:WP_015880440.1
COORDINATES: protein motif:HMM:NF040127.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089587.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162987.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089581.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: protein motif:HMM:NF024503.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162983.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162982.1
COORDINATES: similar to AA sequence:RefSeq:WP_015470324.1
COORDINATES: protein motif:HMM:NF013742.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162963.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162962.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089553.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089551.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162956.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089548.1
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089545.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162951.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089543.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089541.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166172.1
TraR/DksA family transcriptional regulator
COORDINATES: protein motif:HMM:NF025338.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092516.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092526.1
GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165866.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]
GO:0009072 - aromatic amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165867.1
COORDINATES: protein motif:HMM:NF016125.2
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006570 - tyrosine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165872.1
GO:0003868 - 4-hydroxyphenylpyruvate dioxygenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024991.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165878.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165879.1
COORDINATES: protein motif:HMM:NF022188.2
COORDINATES: protein motif:HMM:NF014593.2
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:NF014611.2
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_011165890.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092552.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165437.1
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011165901.1
COORDINATES: protein motif:HMM:NF012584.2
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011165903.1
biotin carboxylase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011165904.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092566.1
carboxyl transferase domain-containing protein
COORDINATES: protein motif:HMM:NF017534.2
COORDINATES: protein motif:HMM:NF025088.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: similar to AA sequence:RefSeq:WP_011165931.1
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF022666.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092598.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092599.1
COORDINATES: similar to AA sequence:RefSeq:WP_011165937.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162812.1
glycerol-3-phosphate dehydrogenase/oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_015089387.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162807.1
alpha-beta hydrolase superfamily protein
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: similar to AA sequence:RefSeq:WP_011162803.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011162802.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_011162797.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089372.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162794.1
COORDINATES: similar to AA sequence:RefSeq:WP_015467406.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089368.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089366.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162789.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089363.1
COORDINATES: protein motif:HMM:NF012387.2
COORDINATES: protein motif:HMM:NF006740.0
COORDINATES: similar to AA sequence:RefSeq:WP_015089331.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011162753.1
GO:0016020 - membrane [Evidence IEA]; GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
monofunctional biosynthetic peptidoglycan transglycosylase
COORDINATES: similar to AA sequence:RefSeq:WP_015089326.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162748.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015471044.1
COORDINATES: protein motif:HMM:NF033640.1
twitch domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_015471042.1
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF024214.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF024584.2
COORDINATES: similar to AA sequence:RefSeq:WP_015471055.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162747.1
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015089320.1
succinylglutamate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011162742.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089318.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089317.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
This family includes IgM or IgG-cleaving cysteine proteases; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011162738.1
GO:0065003 - protein-containing complex assembly [Evidence IEA]
outer membrane protein assembly factor BamD
COORDINATES: similar to AA sequence:RefSeq:WP_011162737.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089314.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089311.1
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162726.1
COORDINATES: similar to AA sequence:RefSeq:WP_011162725.1
COORDINATES: similar to AA sequence:RefSeq:WP_015089303.1
COORDINATES: similar to AA sequence:RefSeq:WP_004585059.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015338933.1
COORDINATES: similar to AA sequence:RefSeq:WP_011163741.1
COORDINATES: protein motif:HMM:NF012694.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:NF017666.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091318.1
FMN-binding glutamate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015471164.1
COORDINATES: similar to AA sequence:RefSeq:WP_015471166.1
COORDINATES: protein motif:HMM:NF025107.2
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF018697.2
COORDINATES: protein motif:HMM:TIGR01613.1
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: similar to AA sequence:RefSeq:WP_015089438.1
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: protein motif:HMM:NF013964.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: similar to AA sequence:RefSeq:WP_015090507.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092266.1
COORDINATES: protein motif:HMM:NF015159.2
MetQ/NlpA family ABC transporter substrate-binding protein
methionine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015089907.1
COORDINATES: protein motif:HMM:NF012200.0
choice-of-anchor D domain-containing protein
COORDINATES: protein motif:HMM:NF017874.2
COORDINATES: protein motif:HMM:NF025134.2
COORDINATES: protein motif:HMM:NF015893.2
COORDINATES: similar to AA sequence:RefSeq:WP_015471105.1
COORDINATES: similar to AA sequence:RefSeq:WP_015471107.1
COORDINATES: similar to AA sequence:RefSeq:WP_015471109.1
COORDINATES: protein motif:HMM:NF025574.2
GO:0016407 - acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015091329.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: protein motif:HMM:NF012656.2
COORDINATES: protein motif:HMM:NF021462.2
COORDINATES: similar to AA sequence:RefSeq:WP_014102022.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
twin-arginine translocation signal domain-containing protein
COORDINATES: protein motif:HMM:TIGR03562.1
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF022592.2
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF039992.1
COORDINATES: protein motif:HMM:NF014589.2
COORDINATES: protein motif:HMM:NF005871.0
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166099.1
COORDINATES: similar to AA sequence:RefSeq:WP_009459611.1
COORDINATES: similar to AA sequence:RefSeq:WP_014102200.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015471217.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_015092761.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166128.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF024805.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092777.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166137.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021486.2
COORDINATES: similar to AA sequence:RefSeq:WP_015092782.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF015510.2
outer-membrane lipoprotein carrier protein LolA
COORDINATES: similar to AA sequence:RefSeq:WP_011166145.1
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: similar to AA sequence:RefSeq:WP_011166146.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]; GO:0004515 - nicotinate-nucleotide adenylyltransferase activity [Evidence IEA]
nicotinate (nicotinamide) nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011166147.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166148.1
COORDINATES: similar to AA sequence:RefSeq:WP_038450368.1
COORDINATES: protein motif:HMM:NF014691.2
COORDINATES: protein motif:HMM:TIGR04215.1
COORDINATES: protein motif:HMM:NF012699.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290574.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092790.1
GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166152.1
type IV pilus twitching motility protein PilT
COORDINATES: similar to AA sequence:RefSeq:WP_000667286.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004490.0
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166156.1
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166157.1
COORDINATES: protein motif:HMM:NF003037.0
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092798.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092799.1
GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011166160.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166163.1
COORDINATES: protein motif:HMM:NF014470.2
GO:0015031 - protein transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015092803.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092805.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092806.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166169.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166170.1
DnaJ C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: similar to AA sequence:RefSeq:WP_011165848.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092812.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166174.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166179.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166180.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166184.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092822.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166186.1
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166187.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: similar to AA sequence:RefSeq:WP_011166188.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092824.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166190.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092826.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01216.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020045332.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092832.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166197.1
COORDINATES: protein motif:HMM:NF012439.2
COORDINATES: protein motif:HMM:NF012645.2
COORDINATES: similar to AA sequence:RefSeq:WP_011166201.1
COORDINATES: similar to AA sequence:RefSeq:WP_011166202.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_015466429.1
COORDINATES: protein motif:HMM:TIGR00138.1
COORDINATES: similar to AA sequence:RefSeq:WP_015092842.1
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:TIGR00450.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_015092844.1
COORDINATES: protein motif:HMM:TIGR03593.1
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011166211.1