Dryobates pubescens isolate bDryPub1 chromosome W, bDryPub1.pri, whole genome shotgun sequence.
type: Entry
definition: Dryobates pubescens isolate bDryPub1 chromosome W, bDryPub1.pri, whole genome shotgun sequence.
sequence version: NC_071656.1
sequence date: 2023-03-13
sequence: sequence
division: CON
label: NC_071656.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA940839
dblink: SAMN12629497
keyword: WGS
keyword: RefSeq
source: Dryobates pubescens (Downy woodpecker)
organism: Dryobates pubescens
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM026038.1.\nAssembly name: bDryPub1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/10/02. The original whole-genome shotgun project has the\naccession JACNMV000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-JUL-2020\nAssembly Method :: FALCON v. 1.3.0 2018.31.08-03.06;\n FALCON-Unzip v. 1.2.0 6.0.0.47841;\n purge_dups v. github\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b\n ca23030ccf4254dfd2d3a5ea90d0eed41c24f88b;\n Scaff10x v. 4.1.0; Bionano Solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n SMRTLink7.0.1; Longranger Align v. 2.2.2;\n freebayes v. 1.3.1; gEVAL manual curation\n v. 2020-07-16; VGP assembly pipeline v.\n 1.6\nAssembly Name :: bDryPub1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 62.43x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_014839835.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/06/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 3896135
topology: linear
so has quality: SO_0000987
location: 1..3896135
location: region:1-3896135:1
RO_0002162: 118200

NC_071656
type: RefSeq
SIO_000068: refseq

PRJNA940839
type: BioProject
SIO_000068: bioproject

SAMN12629497
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3896135:1
position: 3896135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-3896135:1:source
so part of: sequence
organism: Dryobates pubescens
mol type: genomic DNA
isolate: bDryPub1
chromosome: W
sex: female
tissue type: blood
dev stage: adult
country: USA: North Carolina
lat lon: 36.13054 N 80.2563 W
collection date: 02-Apr-2019
collected by: Matt Fuxjager, Eric Schuppe

118200
type: Taxonomy
SIO_000068: taxonomy

LOC128899329
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC128899329
note: ras GTPase-activating protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 17579..38544
location: region:17579-38544:1
so has part: feature:17579-38544:1:exon
subclass of: SO_0000010

128899329
type: Gene
SIO_000068: ncbigene

position:17579:1
position: 17579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38544:1
position: 38544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17579-38544:1:exon

LOC128899329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC128899329
product: ras GTPase-activating protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_054177722.1
SIO_010081: LOC128899329
subclass of: SO_0000673
so part of: LOC128899329
location: join(17579..17650,30230..30297,31681..31769,36301..36378,37695..37829,38539..38544)
location: region:17579-38544:1
so has part: feature:17579-17650:1:exon
so has part: feature:30230-30297:1:exon
so has part: feature:31681-31769:1:exon
so has part: feature:36301-36378:1:exon
so has part: feature:37695-37829:1:exon
so has part: feature:38539-38544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17579-17650:1:exon

position:17650:1
position: 17650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30230-30297:1:exon

position:30230:1
position: 30230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30297:1
position: 30297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:31681-31769:1:exon

position:31681:1
position: 31681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31769:1
position: 31769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36301-36378:1:exon

position:36301:1
position: 36301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36378:1
position: 36378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37695-37829:1:exon

position:37695:1
position: 37695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37829:1
position: 37829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:38539-38544:1:exon

position:38539:1
position: 38539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128899329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC128899329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating protein 1-like
translation: MRTRVVSGFVFLRLLCPAILNPRTFNIISDSPSPTAARTLTLVAKSLQNLANLVEFGAKEPYMEGVNPFIKNNKHRMIMFLDELGNVPELPGTTEHSRTDLSRYLAALHEMCVAHSDELRTLSNERGAMQR
SIO_010081: LOC128899329
subclass of: SO_0000673
so part of: LOC128899329
location: join(17631..17650,30230..30297,31681..31769,36301..36378,37695..37829,38539..38544)
location: region:17631-38544:1
so has part: feature:17631-17650:1:exon
so has part: feature:30230-30297:1:exon
so has part: feature:31681-31769:1:exon
so has part: feature:36301-36378:1:exon
so has part: feature:37695-37829:1:exon
so has part: feature:38539-38544:1:exon

XP_054033697.1
type: Protein
SIO_000068: ncbiprotein

position:17631:1
position: 17631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17631-17650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30230-30297:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31681-31769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36301-36378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37695-37829:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:38539-38544:1:exon

LOC104301086
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104301086
note: uncharacterized LOC104301086; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(140914..142465)
location: region:140914-142465:-1
so has part: feature:140914-142465:-1:exon
subclass of: SO_0000011

104301086
type: Gene
SIO_000068: ncbigene

position:140914:-1
position: 140914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142465:-1
position: 142465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140914-142465:-1:exon

LOC104301086
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 118200
nc RNA class: lncRNA
gene: LOC104301086
product: uncharacterized LOC104301086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008463065.1
SIO_010081: LOC104301086
subclass of: SO_0000673
so part of: LOC104301086
location: complement(join(140914..141005,141791..141902,142318..142465))
location: region:140914-142465:-1
so has part: feature:142318-142465:-1:exon
so has part: feature:141791-141902:-1:exon
so has part: feature:140914-141005:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142318-142465:-1:exon

position:142318:-1
position: 142318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141791-141902:-1:exon

position:141791:-1
position: 141791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141902:-1
position: 141902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140914-141005:-1:exon

position:141005:-1
position: 141005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104301319
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104301319
note: nipped-B-like protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(231044..485059)
location: region:231044-485059:-1
so has part: feature:231044-485059:-1:exon
subclass of: SO_0000010

104301319
type: Gene
SIO_000068: ncbigene

position:231044:-1
position: 231044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485059:-1
position: 485059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231044-485059:-1:exon

LOC104301319
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104301319
product: nipped-B-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_054177739.1
SIO_010081: LOC104301319
subclass of: SO_0000673
so part of: LOC104301319
location: complement(join(231044..231986,232584..232769,233366..233540,233849..234144,235393..235539,236605..236805,237788..237895,238665..238855,239391..239564,249203..249293,249840..249994,250103..250196,250521..250661,254154..254290,254862..254970,255815..255868,256883..256981,258411..258545,263731..263877,263992..264090,264961..265063,265158..265372,265618..265704,277175..277318,278735..278867,280131..280213,280418..280556,292049..292149,293658..293738,294116..294267,294575..294806,304322..304408,305701..305801,307532..307621,307708..307779,307934..308122,334345..334527,360018..361520,373234..373866,384368..384461,388800..388960,392966..393117,398809..398908,412541..412671,413827..413992,417844..417987,484866..485059))
location: region:231044-485059:-1
so has part: feature:484866-485059:-1:exon
so has part: feature:417844-417987:-1:exon
so has part: feature:413827-413992:-1:exon
so has part: feature:412541-412671:-1:exon
so has part: feature:398809-398908:-1:exon
so has part: feature:392966-393117:-1:exon
so has part: feature:388800-388960:-1:exon
so has part: feature:384368-384461:-1:exon
so has part: feature:373234-373866:-1:exon
so has part: feature:360018-361520:-1:exon
so has part: feature:334345-334527:-1:exon
so has part: feature:307934-308122:-1:exon
so has part: feature:307708-307779:-1:exon
so has part: feature:307532-307621:-1:exon
so has part: feature:305701-305801:-1:exon
so has part: feature:304322-304408:-1:exon
so has part: feature:294575-294806:-1:exon
so has part: feature:294116-294267:-1:exon
so has part: feature:293658-293738:-1:exon
so has part: feature:292049-292149:-1:exon
so has part: feature:280418-280556:-1:exon
so has part: feature:280131-280213:-1:exon
so has part: feature:278735-278867:-1:exon
so has part: feature:277175-277318:-1:exon
so has part: feature:265618-265704:-1:exon
so has part: feature:265158-265372:-1:exon
so has part: feature:264961-265063:-1:exon
so has part: feature:263992-264090:-1:exon
so has part: feature:263731-263877:-1:exon
so has part: feature:258411-258545:-1:exon
so has part: feature:256883-256981:-1:exon
so has part: feature:255815-255868:-1:exon
so has part: feature:254862-254970:-1:exon
so has part: feature:254154-254290:-1:exon
so has part: feature:250521-250661:-1:exon
so has part: feature:250103-250196:-1:exon
so has part: feature:249840-249994:-1:exon
so has part: feature:249203-249293:-1:exon
so has part: feature:239391-239564:-1:exon
so has part: feature:238665-238855:-1:exon
so has part: feature:237788-237895:-1:exon
so has part: feature:236605-236805:-1:exon
so has part: feature:235393-235539:-1:exon
so has part: feature:233849-234144:-1:exon
so has part: feature:233366-233540:-1:exon
so has part: feature:232584-232769:-1:exon
so has part: feature:231044-231986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:484866-485059:-1:exon

position:484866:-1
position: 484866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:417844-417987:-1:exon

position:417844:-1
position: 417844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417987:-1
position: 417987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413827-413992:-1:exon

position:413827:-1
position: 413827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413992:-1
position: 413992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:412541-412671:-1:exon

position:412541:-1
position: 412541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412671:-1
position: 412671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:398809-398908:-1:exon

position:398809:-1
position: 398809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398908:-1
position: 398908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:392966-393117:-1:exon

position:392966:-1
position: 392966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393117:-1
position: 393117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:388800-388960:-1:exon

position:388800:-1
position: 388800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388960:-1
position: 388960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:384368-384461:-1:exon

position:384368:-1
position: 384368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384461:-1
position: 384461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:373234-373866:-1:exon

position:373234:-1
position: 373234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373866:-1
position: 373866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:360018-361520:-1:exon

position:360018:-1
position: 360018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361520:-1
position: 361520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:334345-334527:-1:exon

position:334345:-1
position: 334345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334527:-1
position: 334527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:307934-308122:-1:exon

position:307934:-1
position: 307934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308122:-1
position: 308122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:307708-307779:-1:exon

position:307708:-1
position: 307708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307779:-1
position: 307779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:307532-307621:-1:exon

position:307532:-1
position: 307532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307621:-1
position: 307621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:305701-305801:-1:exon

position:305701:-1
position: 305701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305801:-1
position: 305801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:304322-304408:-1:exon

position:304322:-1
position: 304322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304408:-1
position: 304408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:294575-294806:-1:exon

position:294575:-1
position: 294575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294806:-1
position: 294806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:294116-294267:-1:exon

position:294116:-1
position: 294116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294267:-1
position: 294267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:293658-293738:-1:exon

position:293658:-1
position: 293658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293738:-1
position: 293738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:292049-292149:-1:exon

position:292049:-1
position: 292049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292149:-1
position: 292149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:280418-280556:-1:exon

position:280418:-1
position: 280418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280556:-1
position: 280556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:280131-280213:-1:exon

position:280131:-1
position: 280131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280213:-1
position: 280213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:278735-278867:-1:exon

position:278735:-1
position: 278735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278867:-1
position: 278867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:277175-277318:-1:exon

position:277175:-1
position: 277175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277318:-1
position: 277318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:265618-265704:-1:exon

position:265618:-1
position: 265618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265704:-1
position: 265704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:265158-265372:-1:exon

position:265158:-1
position: 265158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265372:-1
position: 265372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:264961-265063:-1:exon

position:264961:-1
position: 264961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265063:-1
position: 265063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:263992-264090:-1:exon

position:263992:-1
position: 263992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264090:-1
position: 264090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:263731-263877:-1:exon

position:263731:-1
position: 263731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263877:-1
position: 263877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:258411-258545:-1:exon

position:258411:-1
position: 258411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258545:-1
position: 258545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:256883-256981:-1:exon

position:256883:-1
position: 256883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256981:-1
position: 256981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:255815-255868:-1:exon

position:255815:-1
position: 255815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255868:-1
position: 255868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:254862-254970:-1:exon

position:254862:-1
position: 254862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254970:-1
position: 254970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:254154-254290:-1:exon

position:254154:-1
position: 254154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254290:-1
position: 254290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:250521-250661:-1:exon

position:250521:-1
position: 250521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250661:-1
position: 250661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:250103-250196:-1:exon

position:250103:-1
position: 250103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250196:-1
position: 250196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:249840-249994:-1:exon

position:249840:-1
position: 249840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249994:-1
position: 249994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:249203-249293:-1:exon

position:249203:-1
position: 249203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249293:-1
position: 249293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:239391-239564:-1:exon

position:239391:-1
position: 239391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239564:-1
position: 239564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:238665-238855:-1:exon

position:238665:-1
position: 238665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238855:-1
position: 238855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:237788-237895:-1:exon

position:237788:-1
position: 237788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237895:-1
position: 237895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:236605-236805:-1:exon

position:236605:-1
position: 236605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236805:-1
position: 236805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:235393-235539:-1:exon

position:235393:-1
position: 235393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235539:-1
position: 235539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:233849-234144:-1:exon

position:233849:-1
position: 233849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234144:-1
position: 234144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:233366-233540:-1:exon

position:233366:-1
position: 233366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233540:-1
position: 233540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:232584-232769:-1:exon

position:232584:-1
position: 232584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232769:-1
position: 232769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:231044-231986:-1:exon

position:231986:-1
position: 231986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104301319
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104301319
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nipped-B-like protein
translation: MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDENLVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQTRYGVQSGMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYAPQSPAGYMPYSHPPSYTPHPQMQQASVSSPLVTAGMRNLHENKVSSQLSGNSANHHADNSRHGSNDDYLQMVHRLSSDDGDPSIRSAASFSLRSPQSVCSPAGSDGTLKGSRQPLIQQSQPPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTLRLSRVRSSDTDQHDDMLSGFENSSVSEGDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCLPQHEQTAFLQAQQVPVLQQNASVTAKQPQTPVVQTQQQVSQQGTITSYDEVELDALAEIERIERESAIERERFSKEVQDKDKPLKKRKQENKPQEPGGTTGGNRAASQETGSAGNGVRPALMVSIDLQQAGRADSQATVTQDLDTMRKPEEIKQYNDGFVCVPQEDTVGVLKFKPENHPEIFTKTSDFEGQKTDVQQNEKRQMEFQQNVSRGLESKHNESKQIEAKCESKHESRHMEVKHNENRQTESKQNERRQMEMKQNEGKQNNGKQEIRQRPEMPKQKSEGRPETPKHRHDNRRDSSKPLSDKKTEISRHKLDMKSDLSRIKSESRSDLTKQRPDGRSVSDTLRCDYDSLKQRSEDREESERYRGDPSKIRRPEYLRSSNKNEHDSKHGVKSDGSKVEKFERKHRHESAESRERFSSGDQKSRSDSPRIKQEGKGDSSKSKPDKPAFKSPNSKDERRTDGNKSKVDSNKAHADNKAEFPSYLLGARSGTLKHFVIPKIKRDKDGSVTQESRKTEFKGEQKDKIEKIGLVEDLNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSFKPNKNKSSKPNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSEEDNDSEEAFESSRKRHKKDRDEAWEYEEHDRRNSGDHRRSGYFEGRRTGGGRYRNRSPNDSDMDDYSPPSLSDVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGDDEIPQELLLGKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGAKLSTLLNHNNDTEDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNRVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSETDGEPMYIQMVTALVLQLIQCVVHLPSTEKESNSEEESNKKVDQDVLITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQISGNDEIQQLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDPSEGSHHSKDVETTGQIMHRAESRKMFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVI…
SIO_010081: LOC104301319
subclass of: SO_0000673
so part of: LOC104301319
location: complement(join(231618..231986,232584..232769,233366..233540,233849..234144,235393..235539,236605..236805,237788..237895,238665..238855,239391..239564,249203..249293,249840..249994,250103..250196,250521..250661,254154..254290,254862..254970,255815..255868,256883..256981,258411..258545,263731..263877,263992..264090,264961..265063,265158..265372,265618..265704,277175..277318,278735..278867,280131..280213,280418..280556,292049..292149,293658..293738,294116..294267,294575..294806,304322..304408,305701..305801,307532..307621,307708..307779,307934..308122,334345..334527,360018..361520,373234..373866,384368..384461,388800..388960,392966..393117,398809..398908,412541..412671,413827..413992,417844..417907))
location: region:231618-417907:-1
so has part: feature:417844-417907:-1:exon
so has part: feature:413827-413992:-1:exon
so has part: feature:412541-412671:-1:exon
so has part: feature:398809-398908:-1:exon
so has part: feature:392966-393117:-1:exon
so has part: feature:388800-388960:-1:exon
so has part: feature:384368-384461:-1:exon
so has part: feature:373234-373866:-1:exon
so has part: feature:360018-361520:-1:exon
so has part: feature:334345-334527:-1:exon
so has part: feature:307934-308122:-1:exon
so has part: feature:307708-307779:-1:exon
so has part: feature:307532-307621:-1:exon
so has part: feature:305701-305801:-1:exon
so has part: feature:304322-304408:-1:exon
so has part: feature:294575-294806:-1:exon
so has part: feature:294116-294267:-1:exon
so has part: feature:293658-293738:-1:exon
so has part: feature:292049-292149:-1:exon
so has part: feature:280418-280556:-1:exon
so has part: feature:280131-280213:-1:exon
so has part: feature:278735-278867:-1:exon
so has part: feature:277175-277318:-1:exon
so has part: feature:265618-265704:-1:exon
so has part: feature:265158-265372:-1:exon
so has part: feature:264961-265063:-1:exon
so has part: feature:263992-264090:-1:exon
so has part: feature:263731-263877:-1:exon
so has part: feature:258411-258545:-1:exon
so has part: feature:256883-256981:-1:exon
so has part: feature:255815-255868:-1:exon
so has part: feature:254862-254970:-1:exon
so has part: feature:254154-254290:-1:exon
so has part: feature:250521-250661:-1:exon
so has part: feature:250103-250196:-1:exon
so has part: feature:249840-249994:-1:exon
so has part: feature:249203-249293:-1:exon
so has part: feature:239391-239564:-1:exon
so has part: feature:238665-238855:-1:exon
so has part: feature:237788-237895:-1:exon
so has part: feature:236605-236805:-1:exon
so has part: feature:235393-235539:-1:exon
so has part: feature:233849-234144:-1:exon
so has part: feature:233366-233540:-1:exon
so has part: feature:232584-232769:-1:exon
so has part: feature:231618-231986:-1:exon

XP_054033714.1
type: Protein
SIO_000068: ncbiprotein

position:231618:-1
position: 231618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417907:-1
position: 417907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417844-417907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413827-413992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412541-412671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398809-398908:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392966-393117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388800-388960:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:384368-384461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373234-373866:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:360018-361520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:334345-334527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307934-308122:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307708-307779:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:307532-307621:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:305701-305801:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:304322-304408:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:294575-294806:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:294116-294267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:293658-293738:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:292049-292149:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:280418-280556:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:280131-280213:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:278735-278867:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:277175-277318:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:265618-265704:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:265158-265372:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:264961-265063:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:263992-264090:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:263731-263877:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:258411-258545:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:256883-256981:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:255815-255868:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:254862-254970:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:254154-254290:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:250521-250661:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:250103-250196:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:249840-249994:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:249203-249293:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:239391-239564:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:238665-238855:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:237788-237895:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:236605-236805:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:235393-235539:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:233849-234144:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:233366-233540:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:232584-232769:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:231618-231986:-1:exon

LOC104296114
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104296114
note: protein C18orf25 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 579025..596097
location: region:579025-596097:1
so has part: feature:579025-596097:1:exon
subclass of: SO_0000010

104296114
type: Gene
SIO_000068: ncbigene

position:579025:1
position: 579025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596097:1
position: 596097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579025-596097:1:exon

LOC104296114
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104296114
product: protein C18orf25 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_054177724.1
SIO_010081: LOC104296114
subclass of: SO_0000673
so part of: LOC104296114
location: join(579025..579786,595937..596097)
location: region:579025-596097:1
so has part: feature:579025-579786:1:exon
so has part: feature:595937-596097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:579025-579786:1:exon

position:579786:1
position: 579786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595937-596097:1:exon

position:595937:1
position: 595937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104296114
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104296114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C18orf25 homolog
translation: MFHALRPEGPWCSEMKMEPVGKSELLVSEIPTEASEKQETTPDEEPIELERQTQKDNVPITTDSVVLTSMPCLLMELSRDSSESQLASTESNKPTGGQVYESDSSNRFILSPSSSGHLADSDTLFSTEENEPCHDETAVEGDSSAVSGTAVGRKFRRSRSESKVSAMAAKKNRQSNNKHNGRLTKVKGHRNQKHKERIRILRHKREAAARKKYNLLQDSSTSDSNQTCESSTTSSSDDEEVSGSNKTITAEIPAIFRAVLGAPVPSEHSVLARPSVFSRSWYLPGAHWLFRLGRVLPPPYDCRGSR
SIO_010081: LOC104296114
subclass of: SO_0000673
so part of: LOC104296114
location: join(579027..579786,595937..596097)
location: region:579027-596097:1
so has part: feature:579027-579786:1:exon
so has part: feature:595937-596097:1:exon

XP_054033699.1
type: Protein
SIO_000068: ncbiprotein

position:579027:1
position: 579027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579027-579786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595937-596097:1:exon

LOC104305590
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104305590
note: zinc finger protein 131; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 625580..649772
location: region:625580-649772:1
so has part: feature:625580-649772:1:exon
subclass of: SO_0000010

104305590
type: Gene
SIO_000068: ncbigene

position:625580:1
position: 625580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649772:1
position: 649772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625580-649772:1:exon

LOC104305590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104305590
product: zinc finger protein 131
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_009906454.2
SIO_010081: LOC104305590
subclass of: SO_0000673
so part of: LOC104305590
location: join(625580..625660,627659..627760,632569..632713,633814..634171,634274..634496,645928..646058,648573..649772)
location: region:625580-649772:1
so has part: feature:625580-625660:1:exon
so has part: feature:627659-627760:1:exon
so has part: feature:632569-632713:1:exon
so has part: feature:633814-634171:1:exon
so has part: feature:634274-634496:1:exon
so has part: feature:645928-646058:1:exon
so has part: feature:648573-649772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:625580-625660:1:exon

position:625660:1
position: 625660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:627659-627760:1:exon

position:627659:1
position: 627659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627760:1
position: 627760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:632569-632713:1:exon

position:632569:1
position: 632569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632713:1
position: 632713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633814-634171:1:exon

position:633814:1
position: 633814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634171:1
position: 634171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:634274-634496:1:exon

position:634274:1
position: 634274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634496:1
position: 634496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:645928-646058:1:exon

position:645928:1
position: 645928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646058:1
position: 646058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:648573-649772:1:exon

position:648573:1
position: 648573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104305590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104305590
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:649164..649166,aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein 131
translation: MAFRHLIEFTYTAKLMVQGEEEANDVWKAAEYLQMLEAIKALEIRNKENSSPLESNQMQGKNKPKKRKIAETSNVITETLPSADSEPVEIEVEIAEGTIEVEDDSTETLEVSSAEQSIKYLQATGTSDESALALLADITSKYRQGEAKCQIQEGDGATDPSCKQEHMKTHSTESYKCDICNKRYLRESALKQHLTSYHLDEGGASKKQRPGKKIHICQYCNKQFDHFGHFKEHLRKHTGEKPFECPNCHERFARNSTLKCHLTACQSGAGAKKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGSELRRHLKEMHNISEQIVTEQVLPVEAEPVTSMTIIEQVEQVHVLPVIQVQVDPAQVTVEQMHQDLMENSQVKDTQMEELQEQVQISYLEVEHIQTEQGAEVHVEQLHVQHVNQIQMEDVQTELVGGTDLEQVEYESIDQGEAEENKIDQVDNIDKEDHEXAEDLNSTVSGHTE
SIO_010081: LOC104305590
subclass of: SO_0000673
so part of: LOC104305590
location: join(632580..632713,633814..634171,634274..634496,645928..646058,648573..649208)
location: region:632580-649208:1
so has part: feature:632580-632713:1:exon
so has part: feature:633814-634171:1:exon
so has part: feature:634274-634496:1:exon
so has part: feature:645928-646058:1:exon
so has part: feature:648573-649208:1:exon

XP_009904756.2
type: Protein
SIO_000068: ncbiprotein

position:632580:1
position: 632580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649208:1
position: 649208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632580-632713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633814-634171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634274-634496:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645928-646058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648573-649208:1:exon

LOC104300432
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104300432
note: RNA-binding E3 ubiquitin-protein ligase MEX3C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 740348..849274
location: region:740348-849274:1
so has part: feature:740348-849274:1:exon
subclass of: SO_0000010

104300432
type: Gene
SIO_000068: ncbigene

position:740348:1
position: 740348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849274:1
position: 849274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740348-849274:1:exon

LOC104300432
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104300432
product: RNA-binding E3 ubiquitin-protein ligase MEX3C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054177725.1
SIO_010081: LOC104300432
subclass of: SO_0000673
so part of: LOC104300432
location: join(740348..740431,744659..745061,745174..745227,847998..849274)
location: region:740348-849274:1
so has part: feature:740348-740431:1:exon
so has part: feature:744659-745061:1:exon
so has part: feature:745174-745227:1:exon
so has part: feature:847998-849274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740348-740431:1:exon

position:740431:1
position: 740431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744659-745061:1:exon

position:744659:1
position: 744659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745061:1
position: 745061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:745174-745227:1:exon

position:745174:1
position: 745174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745227:1
position: 745227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:847998-849274:1:exon

position:847998:1
position: 847998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104300432
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104300432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding E3 ubiquitin-protein ligase MEX3C
translation: MDLREMKMRKAVAGQGAYDPLSGLCAWAEVVAGDKGDLEEEQLAGEDEEDPAALLLFSSSSSSSSPSQLLPLLGSVLLSSSFDGQEAAAGALCGADDLQGMMAAILSQAYGGGGGLGGGCNGAGAAGLNDEQAALLCRKSVNTTECVPVPSSEHVAEIVGRQGLSPHTPEMSPGEGPPYFGYKIKALRAKTNTYIKTPIRGEESIFVITGRKEDVAMAKREILSAAEHFSMIRASRNKNGSALGNLPCTPNLPGQTTVQVRVPYRVVGLVVGPKGATVKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRARKEIEMHIAMRTGNYIEINKENDFHCNGTDVSFEGGILSATWLASNPNPPIHTRMISNYRNGSSSSLGSGSTDSYFGSNRLADFSPTRPFSTGNFWFGEMLPSVGTEDIVVDSPTYDSLPMPSQTIWTPFEPVNPLSGFSSNPVSKANLQHQGSQPSTPCVSPTFPENLDHPLARRVRSDPSSTAHQAGLPIYIPAFSNGTNSYCSSNGGSTSSSPPELTRKHDCIICFERKVTSALVPCGHNLFCMECANKICEKETPACPICQVAVTQAIQIHS
SIO_010081: LOC104300432
subclass of: SO_0000673
so part of: LOC104300432
location: join(740348..740431,744659..745061,745174..745227,847998..849223)
location: region:740348-849223:1
so has part: feature:740348-740431:1:exon
so has part: feature:744659-745061:1:exon
so has part: feature:745174-745227:1:exon
so has part: feature:847998-849223:1:exon

XP_054033700.1
type: Protein
SIO_000068: ncbiprotein

position:849223:1
position: 849223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740348-740431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744659-745061:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745174-745227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847998-849223:1:exon

TRNAI-GAU
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: TRNAI-GAU
note: transfer RNA isoleucine (anticodon GAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 759700..759770
location: region:759700-759770:1
so has part: feature:759700-759770:1:exon
subclass of: SO_0000663

128899334
type: Gene
SIO_000068: ncbigene

position:759700:1
position: 759700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759770:1
position: 759770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759700-759770:1:exon

TRNAI-GAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 118200
gene: TRNAI-GAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon GAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:759732..759734,aa:Ile,seq:gat)
SIO_010081: TRNAI-GAU
subclass of: SO_0000673
so part of: TRNAI-GAU
location: 759700..759770
location: region:759700-759770:1
so has part: feature:759700-759770:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:759700-759770:1:exon

SMAD4
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: SMAD4
note: SMAD family member 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(875403..900547)
location: region:875403-900547:-1
so has part: feature:875403-900547:-1:exon
subclass of: SO_0000010

104301016
type: Gene
SIO_000068: ncbigene

position:875403:-1
position: 875403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900547:-1
position: 900547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875403-900547:-1:exon

SMAD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: SMAD4
product: SMAD family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_009901354.2
SIO_010081: SMAD4
subclass of: SO_0000673
so part of: SMAD4
location: complement(join(875403..876236,878273..878411,879340..879508,879809..879992,890321..890371,891687..891797,891930..892049,893434..893649,896149..896178,896582..896756,900248..900547))
location: region:875403-900547:-1
so has part: feature:900248-900547:-1:exon
so has part: feature:896582-896756:-1:exon
so has part: feature:896149-896178:-1:exon
so has part: feature:893434-893649:-1:exon
so has part: feature:891930-892049:-1:exon
so has part: feature:891687-891797:-1:exon
so has part: feature:890321-890371:-1:exon
so has part: feature:879809-879992:-1:exon
so has part: feature:879340-879508:-1:exon
so has part: feature:878273-878411:-1:exon
so has part: feature:875403-876236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:900248-900547:-1:exon

position:900248:-1
position: 900248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896582-896756:-1:exon

position:896582:-1
position: 896582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896756:-1
position: 896756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:896149-896178:-1:exon

position:896149:-1
position: 896149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896178:-1
position: 896178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:893434-893649:-1:exon

position:893434:-1
position: 893434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893649:-1
position: 893649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:891930-892049:-1:exon

position:891930:-1
position: 891930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892049:-1
position: 892049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:891687-891797:-1:exon

position:891687:-1
position: 891687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891797:-1
position: 891797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890321-890371:-1:exon

position:890321:-1
position: 890321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890371:-1
position: 890371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:879809-879992:-1:exon

position:879809:-1
position: 879809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879992:-1
position: 879992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:879340-879508:-1:exon

position:879340:-1
position: 879340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879508:-1
position: 879508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:878273-878411:-1:exon

position:878273:-1
position: 878273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878411:-1
position: 878411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:875403-876236:-1:exon

position:876236:-1
position: 876236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMAD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: SMAD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 4
translation: MSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSSAPSSMLVKDEYVHDYEGQPSLSSAEGHSVQTIQHPPSNRASTEPYSTPALLAPTEASTTSTTNFPNIPVASTSQPTSILTGSHSDGLLQIASGPQPGTQQNGFTAQPATYHHNSTTTWTGSRTAAYTPTIPHHQNGHLQHHPPMHPGHYWSVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTMPIADPQPLD
SIO_010081: SMAD4
subclass of: SO_0000673
so part of: SMAD4
location: complement(join(876025..876236,878273..878411,879340..879508,879809..879992,890321..890371,891687..891797,891930..892049,893434..893649,896149..896178,896582..896756,900248..900487))
location: region:876025-900487:-1
so has part: feature:900248-900487:-1:exon
so has part: feature:896582-896756:-1:exon
so has part: feature:896149-896178:-1:exon
so has part: feature:893434-893649:-1:exon
so has part: feature:891930-892049:-1:exon
so has part: feature:891687-891797:-1:exon
so has part: feature:890321-890371:-1:exon
so has part: feature:879809-879992:-1:exon
so has part: feature:879340-879508:-1:exon
so has part: feature:878273-878411:-1:exon
so has part: feature:876025-876236:-1:exon

XP_009899656.1
type: Protein
SIO_000068: ncbiprotein

position:876025:-1
position: 876025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900487:-1
position: 900487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900248-900487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896582-896756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:896149-896178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893434-893649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891930-892049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891687-891797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890321-890371:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:879809-879992:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879340-879508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:878273-878411:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:876025-876236:-1:exon

LOC104306805
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104306805
note: zinc finger SWIM domain-containing protein 6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1021877..1390409
location: region:1021877-1390409:1
so has part: feature:1021877-1390409:1:exon
subclass of: SO_0000010

104306805
type: Gene
SIO_000068: ncbigene

position:1021877:1
position: 1021877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390409:1
position: 1390409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021877-1390409:1:exon

LOC104306805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104306805
product: zinc finger SWIM domain-containing protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_054177738.1
SIO_010081: LOC104306805
subclass of: SO_0000673
so part of: LOC104306805
location: join(1021877..1022403,1216277..1216633,1273761..1273909,1275258..1275408,1349728..1349901,1351681..1351857,1352135..1352281,1352512..1352655,1358129..1358389,1360906..1361041,1375238..1375395,1375911..1376074,1380420..1380501,1389455..1390409)
location: region:1021877-1390409:1
so has part: feature:1021877-1022403:1:exon
so has part: feature:1216277-1216633:1:exon
so has part: feature:1273761-1273909:1:exon
so has part: feature:1275258-1275408:1:exon
so has part: feature:1349728-1349901:1:exon
so has part: feature:1351681-1351857:1:exon
so has part: feature:1352135-1352281:1:exon
so has part: feature:1352512-1352655:1:exon
so has part: feature:1358129-1358389:1:exon
so has part: feature:1360906-1361041:1:exon
so has part: feature:1375238-1375395:1:exon
so has part: feature:1375911-1376074:1:exon
so has part: feature:1380420-1380501:1:exon
so has part: feature:1389455-1390409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1021877-1022403:1:exon

position:1022403:1
position: 1022403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1216277-1216633:1:exon

position:1216277:1
position: 1216277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216633:1
position: 1216633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1273761-1273909:1:exon

position:1273761:1
position: 1273761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273909:1
position: 1273909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1275258-1275408:1:exon

position:1275258:1
position: 1275258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275408:1
position: 1275408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1349728-1349901:1:exon

position:1349728:1
position: 1349728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349901:1
position: 1349901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1351681-1351857:1:exon

position:1351681:1
position: 1351681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351857:1
position: 1351857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1352135-1352281:1:exon

position:1352135:1
position: 1352135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352281:1
position: 1352281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1352512-1352655:1:exon

position:1352512:1
position: 1352512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352655:1
position: 1352655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1358129-1358389:1:exon

position:1358129:1
position: 1358129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358389:1
position: 1358389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1360906-1361041:1:exon

position:1360906:1
position: 1360906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361041:1
position: 1361041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1375238-1375395:1:exon

position:1375238:1
position: 1375238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375395:1
position: 1375395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1375911-1376074:1:exon

position:1375911:1
position: 1375911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376074:1
position: 1376074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1380420-1380501:1:exon

position:1380420:1
position: 1380420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380501:1
position: 1380501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1389455-1390409:1:exon

position:1389455:1
position: 1389455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104306805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104306805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger SWIM domain-containing protein 6
translation: MAERGQLPLPAKRLCSRPGYGSGCRPGQLVGGTGLGSGALCAGPAAAAAAAAAAAALGLLPFGKSQSPETLLDIAARKVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGAEDYTAVPGGTTSGTAPSGGADTAATDENLLSFRRGIALLDGGCVDNVLQVGFHLSGTVTEPAIQSEPETVCNVAISFDRCKITSVTCSCGNKDIFYCVHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFAQYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWTCIVLNPHCNLEQKAGWLKQLKKWNSVDVCPWEDGNHGNEIPNLTNALPQGANQDSLNKPHRTVFTRAIEACDLHWQDSHLQHIISSDLYTNYCCHDDTENSLFDYHGWPLWHEHVPTACARVDALRSHGYPQEALRLAIAIVNTLRRQQQKQLEMFRAQKKELLHKGVTSITNLEGWVGHPLDPIGTLFSSLMEACRVDNENFHGFSNTESVEQCKSLEYHHLPAHRFLEEGESYLTLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEIIHRESVPMHTFAKYLFTSLLPHDAELAYKTALRAMWLLVLESMVPSGDVSRPHHIASVVPNRYPRWFTLSHIESQQCELASTMLTAAKGDVRRLETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLRDVTLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATEIGVYALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVHLHLDCHLQEKLASSARTLALQCAVKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTSMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCALTTPGMVGLHGRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYSEFIEFLSKARESFLMAHDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
SIO_010081: LOC104306805
subclass of: SO_0000673
so part of: LOC104306805
location: join(1021878..1022403,1216277..1216633,1273761..1273909,1275258..1275408,1349728..1349901,1351681..1351857,1352135..1352281,1352512..1352655,1358129..1358389,1360906..1361041,1375238..1375395,1375911..1376074,1380420..1380501,1389455..1390317)
location: region:1021878-1390317:1
so has part: feature:1021878-1022403:1:exon
so has part: feature:1216277-1216633:1:exon
so has part: feature:1273761-1273909:1:exon
so has part: feature:1275258-1275408:1:exon
so has part: feature:1349728-1349901:1:exon
so has part: feature:1351681-1351857:1:exon
so has part: feature:1352135-1352281:1:exon
so has part: feature:1352512-1352655:1:exon
so has part: feature:1358129-1358389:1:exon
so has part: feature:1360906-1361041:1:exon
so has part: feature:1375238-1375395:1:exon
so has part: feature:1375911-1376074:1:exon
so has part: feature:1380420-1380501:1:exon
so has part: feature:1389455-1390317:1:exon

XP_054033713.1
type: Protein
SIO_000068: ncbiprotein

position:1021878:1
position: 1021878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390317:1
position: 1390317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021878-1022403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1216277-1216633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1273761-1273909:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1275258-1275408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1349728-1349901:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1351681-1351857:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1352135-1352281:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1352512-1352655:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1358129-1358389:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1360906-1361041:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375238-1375395:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1375911-1376074:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1380420-1380501:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1389455-1390317:1:exon

LOC104301738
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104301738
note: tropomyosin beta chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1447437..1464337)
location: region:1447437-1464337:-1
so has part: feature:1447437-1464337:-1:exon
subclass of: SO_0000010

104301738
type: Gene
SIO_000068: ncbigene

position:1447437:-1
position: 1447437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1464337:-1
position: 1464337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447437-1464337:-1:exon

LOC104301738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104301738
product: tropomyosin beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_009902163.2
SIO_010081: LOC104301738
subclass of: SO_0000673
so part of: LOC104301738
location: complement(join(1447437..1447652,1450483..1450552,1451249..1451311,1451437..1451512,1452186..1452256,1452393..1452534,1453574..1453707,1463455..1463580,1464224..1464337))
location: region:1447437-1464337:-1
so has part: feature:1464224-1464337:-1:exon
so has part: feature:1463455-1463580:-1:exon
so has part: feature:1453574-1453707:-1:exon
so has part: feature:1452393-1452534:-1:exon
so has part: feature:1452186-1452256:-1:exon
so has part: feature:1451437-1451512:-1:exon
so has part: feature:1451249-1451311:-1:exon
so has part: feature:1450483-1450552:-1:exon
so has part: feature:1447437-1447652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1464224-1464337:-1:exon

position:1464224:-1
position: 1464224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1463455-1463580:-1:exon

position:1463455:-1
position: 1463455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463580:-1
position: 1463580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1453574-1453707:-1:exon

position:1453574:-1
position: 1453574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453707:-1
position: 1453707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1452393-1452534:-1:exon

position:1452393:-1
position: 1452393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452534:-1
position: 1452534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1452186-1452256:-1:exon

position:1452186:-1
position: 1452186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452256:-1
position: 1452256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1451437-1451512:-1:exon

position:1451437:-1
position: 1451437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451512:-1
position: 1451512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1451249-1451311:-1:exon

position:1451249:-1
position: 1451249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451311:-1
position: 1451311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1450483-1450552:-1:exon

position:1450483:-1
position: 1450483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450552:-1
position: 1450552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1447437-1447652:-1:exon

position:1447652:-1
position: 1447652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104301738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104301738
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1453645..1453647),aa:OTHER)
product: LOW QUALITY PROTEIN: tropomyosin beta chain-like
translation: MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDLCKQLEEEQQSLQKKLKGTEDEVEKYSESVKEAQEKLGQAEKKATDAEAEVASLNRRIQLVEEELDXAQESLATALQKLEEAEKAADESESSNIFWLGLSSEVIENRATKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVVLEGELERSEERAEVAESKCGDLEEELKIVINNLKSLEAQADKYSTKEDKYEEDIKLLGEKLKEAETRAEFAEQSVVNLEKTIDDLEEESGSAKEENMGIHQVLDQTLLELNNL
SIO_010081: LOC104301738
subclass of: SO_0000673
so part of: LOC104301738
location: complement(join(1447570..1447652,1450483..1450552,1451249..1451311,1451437..1451512,1452186..1452256,1452393..1452534,1453574..1453707,1463455..1463580,1464224..1464337))
location: region:1447570-1464337:-1
so has part: feature:1464224-1464337:-1:exon
so has part: feature:1463455-1463580:-1:exon
so has part: feature:1453574-1453707:-1:exon
so has part: feature:1452393-1452534:-1:exon
so has part: feature:1452186-1452256:-1:exon
so has part: feature:1451437-1451512:-1:exon
so has part: feature:1451249-1451311:-1:exon
so has part: feature:1450483-1450552:-1:exon
so has part: feature:1447570-1447652:-1:exon

XP_009900465.2
type: Protein
SIO_000068: ncbiprotein

position:1447570:-1
position: 1447570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1464224-1464337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463455-1463580:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1453574-1453707:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1452393-1452534:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1452186-1452256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1451437-1451512:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1451249-1451311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1450483-1450552:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1447570-1447652:-1:exon

LOC104306030
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104306030
note: Golgi phosphoprotein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1656910..1792793)
location: region:1656910-1792793:-1
so has part: feature:1656910-1792793:-1:exon
subclass of: SO_0000010

104306030
type: Gene
SIO_000068: ncbigene

position:1656910:-1
position: 1656910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1792793:-1
position: 1792793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1656910-1792793:-1:exon

LOC104306030
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104306030
product: Golgi phosphoprotein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_054177731.1
SIO_010081: LOC104306030
subclass of: SO_0000673
so part of: LOC104306030
location: complement(join(1656910..1657583,1670936..1671050,1705674..1705805,1792439..1792793))
location: region:1656910-1792793:-1
so has part: feature:1792439-1792793:-1:exon
so has part: feature:1705674-1705805:-1:exon
so has part: feature:1670936-1671050:-1:exon
so has part: feature:1656910-1657583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1792439-1792793:-1:exon

position:1792439:-1
position: 1792439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1705674-1705805:-1:exon

position:1705674:-1
position: 1705674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1705805:-1
position: 1705805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1670936-1671050:-1:exon

position:1670936:-1
position: 1670936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1671050:-1
position: 1671050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1656910-1657583:-1:exon

position:1657583:-1
position: 1657583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104306030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104306030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi phosphoprotein 3
translation: MTSLTQRSSSLVQRRTEASRSAAADKQRGAESSPEDEGRRDESGDEENGDSKETRLTLMEEVLLLGLKDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEVSGMRRKSLLTRKVICKSDAPTGDVLLDEALKHIKETQPPETIQSWIELLSGETWNPLKLHYQLRNVRERLAKNLVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKVQEAVLEKWVNDPHRMDKRLLALVYLAHASDVLENAFAPLLDEQYDLATKRVRQLLDLDPEVECMKANTNEVLWAVVAAFTK
SIO_010081: LOC104306030
subclass of: SO_0000673
so part of: LOC104306030
location: complement(join(1657159..1657583,1670936..1671050,1705674..1705805,1792439..1792651))
location: region:1657159-1792651:-1
so has part: feature:1792439-1792651:-1:exon
so has part: feature:1705674-1705805:-1:exon
so has part: feature:1670936-1671050:-1:exon
so has part: feature:1657159-1657583:-1:exon

XP_054033706.1
type: Protein
SIO_000068: ncbiprotein

position:1657159:-1
position: 1657159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1792651:-1
position: 1792651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1792439-1792651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1705674-1705805:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670936-1671050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1657159-1657583:-1:exon

LOC128899328
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC128899328
note: mothers against decapentaplegic homolog 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1863584..2031976
location: region:1863584-2031976:1
so has part: feature:1863584-2031976:1:exon
subclass of: SO_0000010

128899328
type: Gene
SIO_000068: ncbigene

position:1863584:1
position: 1863584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2031976:1
position: 2031976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1863584-2031976:1:exon

LOC128899328
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC128899328
product: mothers against decapentaplegic homolog 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
transcript id: XM_054177719.1
SIO_010081: LOC128899328
subclass of: SO_0000673
so part of: LOC128899328
location: join(1863584..1863646,1875845..1876137,1949066..1949155,1950204..1950397,1950886..1951020,2001246..2001320,2002608..2002661,2003705..2003917,2006406..2006414,2006720..2006848,2010929..2011073,2031471..2031976)
location: region:1863584-2031976:1
so has part: feature:1863584-1863646:1:exon
so has part: feature:1875845-1876137:1:exon
so has part: feature:1949066-1949155:1:exon
so has part: feature:1950204-1950397:1:exon
so has part: feature:1950886-1951020:1:exon
so has part: feature:2001246-2001320:1:exon
so has part: feature:2002608-2002661:1:exon
so has part: feature:2003705-2003917:1:exon
so has part: feature:2006406-2006414:1:exon
so has part: feature:2006720-2006848:1:exon
so has part: feature:2010929-2011073:1:exon
so has part: feature:2031471-2031976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1863584-1863646:1:exon

position:1863646:1
position: 1863646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1875845-1876137:1:exon

position:1875845:1
position: 1875845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1876137:1
position: 1876137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1949066-1949155:1:exon

position:1949066:1
position: 1949066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1949155:1
position: 1949155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1950204-1950397:1:exon

position:1950204:1
position: 1950204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1950397:1
position: 1950397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1950886-1951020:1:exon

position:1950886:1
position: 1950886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1951020:1
position: 1951020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2001246-2001320:1:exon

position:2001246:1
position: 2001246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2001320:1
position: 2001320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2002608-2002661:1:exon

position:2002608:1
position: 2002608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2002661:1
position: 2002661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2003705-2003917:1:exon

position:2003705:1
position: 2003705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2003917:1
position: 2003917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2006406-2006414:1:exon

position:2006406:1
position: 2006406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2006414:1
position: 2006414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2006720-2006848:1:exon

position:2006720:1
position: 2006720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2006848:1
position: 2006848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2010929-2011073:1:exon

position:2010929:1
position: 2010929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011073:1
position: 2011073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2031471-2031976:1:exon

position:2031471:1
position: 2031471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128899328
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC128899328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 2-like
translation: MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNVQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNSNTKCVTIPSTCSEILGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCINPYHYQRVETPVLPPVLVPRHTEILMELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLTQSMDTGSPAELSPSTLSPVNHSLDLQPVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGIRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCSSMS
SIO_010081: LOC128899328
subclass of: SO_0000673
so part of: LOC128899328
location: join(1875902..1876137,1949066..1949155,1950204..1950397,1950886..1951020,2001246..2001320,2002608..2002661,2003705..2003917,2006406..2006414,2006720..2006848,2010929..2011073,2031471..2031594)
location: region:1875902-2031594:1
so has part: feature:1875902-1876137:1:exon
so has part: feature:1949066-1949155:1:exon
so has part: feature:1950204-1950397:1:exon
so has part: feature:1950886-1951020:1:exon
so has part: feature:2001246-2001320:1:exon
so has part: feature:2002608-2002661:1:exon
so has part: feature:2003705-2003917:1:exon
so has part: feature:2006406-2006414:1:exon
so has part: feature:2006720-2006848:1:exon
so has part: feature:2010929-2011073:1:exon
so has part: feature:2031471-2031594:1:exon

XP_054033694.1
type: Protein
SIO_000068: ncbiprotein

position:1875902:1
position: 1875902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2031594:1
position: 2031594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875902-1876137:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1949066-1949155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1950204-1950397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1950886-1951020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2001246-2001320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2002608-2002661:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2003705-2003917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2006406-2006414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2006720-2006848:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2010929-2011073:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2031471-2031594:1:exon

LOC128899330
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC128899330
note: centromere protein T-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2062834..2064639)
location: region:2062834-2064639:-1
so has part: feature:2062834-2064639:-1:exon
subclass of: SO_0000010

128899330
type: Gene
SIO_000068: ncbigene

position:2062834:-1
position: 2062834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2064639:-1
position: 2064639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2062834-2064639:-1:exon

LOC128899330
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC128899330
product: centromere protein T-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_054177726.1
SIO_010081: LOC128899330
subclass of: SO_0000673
so part of: LOC128899330
location: complement(2062834..2064639)
location: region:2062834-2064639:-1
so has part: feature:2062834-2064639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2062834-2064639:-1:exon

LOC128899330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC128899330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein T-like
translation: MAENRLAARRGNRCSWRLSAVSGSGKKNNSGRRSLVKPRLTVLPNPDDDTPRIMLRRVIQTQPQVSPLALQISKHEGTEEAEAEVPSKRVSSMGGMQLPDLLPEDTQVTTFHMAKKRKKFSISEFESAADQRLPQNQAWSALDSTALARSLHVSVGSLVPADLAEEQGLQWRPKQRRAIDLEAFEAGVEQNMLNRKAQSHLVDSQLGMHTGDAEILLSTTRLFVQPQLDEHSQNELSPLPPLLLHSKTSPWRSKNSAAAAEELRLGSLVSSVGTSERQLQWHSGDLSLDPEHGDRATPKLPSDQREHQDPSQQSNPMEQLSLSEEVVAASPELEITMGGRAENLGRPSLAPSSAKPGMKPLNEDKLEDQAIMVQLDGLEEESAVDEGEDPESEEVSLRTPSFVCAAACKPQLSAPLPARPAAPKLSSPCPAKPSASRSPLQPLQAKLVVKSSGASQRRPREAGIVSSWVKKVFSHYAKMPVTREAFRIVEKCSKRYFKQLSNDLEAYANHAGRRTVEMADLEVLMRRQGLVTDRVPMQVLIEHHLPLEYRKLLIPVAVNGNKVIPSQ
SIO_010081: LOC128899330
subclass of: SO_0000673
so part of: LOC128899330
location: complement(2062936..2064639)
location: region:2062936-2064639:-1
so has part: feature:2062936-2064639:-1:exon

XP_054033701.1
type: Protein
SIO_000068: ncbiprotein

position:2062936:-1
position: 2062936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2062936-2064639:-1:exon

LOC104298250
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104298250
note: spindlin-Z; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2138777..2363353
location: region:2138777-2363353:1
so has part: feature:2138777-2363353:1:exon
subclass of: SO_0000010

104298250
type: Gene
SIO_000068: ncbigene

position:2138777:1
position: 2138777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2363353:1
position: 2363353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2138777-2363353:1:exon

LOC104298250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104298250
product: spindlin-Z
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
transcript id: XM_054177721.1
SIO_010081: LOC104298250
subclass of: SO_0000673
so part of: LOC104298250
location: join(2138777..2138798,2278074..2278299,2334083..2334131,2357033..2357286,2358133..2358366,2360678..2363353)
location: region:2138777-2363353:1
so has part: feature:2138777-2138798:1:exon
so has part: feature:2278074-2278299:1:exon
so has part: feature:2334083-2334131:1:exon
so has part: feature:2357033-2357286:1:exon
so has part: feature:2358133-2358366:1:exon
so has part: feature:2360678-2363353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2138777-2138798:1:exon

position:2138798:1
position: 2138798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2278074-2278299:1:exon

position:2278074:1
position: 2278074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2278299:1
position: 2278299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2334083-2334131:1:exon

position:2334083:1
position: 2334083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334131:1
position: 2334131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2357033-2357286:1:exon

position:2357033:1
position: 2357033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2357286:1
position: 2357286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2358133-2358366:1:exon

position:2358133:1
position: 2358133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2358366:1
position: 2358366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2360678-2363353:1:exon

position:2360678:1
position: 2360678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104298250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104298250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindlin-Z
translation: MKTPFGKSPGQRSRADAGHAGVSASMMKKRTSHKKHRNNVGPSKPISQPRRNIVGCRIQHGWKEGSGPVTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHKDERVSALEVLPDRVASSRISDAHLADTMIGKAVEHMFETEDGSKDEWRGMVLARAPIMNTWFYITYEKDPVLYMYQLLDDYKEGDLRIMPDSNDSPPAEREPGEVVDSLVGKQVEYAKEDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKTS
SIO_010081: LOC104298250
subclass of: SO_0000673
so part of: LOC104298250
location: join(2278248..2278299,2334083..2334131,2357033..2357286,2358133..2358366,2360678..2360877)
location: region:2278248-2360877:1
so has part: feature:2278248-2278299:1:exon
so has part: feature:2334083-2334131:1:exon
so has part: feature:2357033-2357286:1:exon
so has part: feature:2358133-2358366:1:exon
so has part: feature:2360678-2360877:1:exon

XP_054033696.1
type: Protein
SIO_000068: ncbiprotein

position:2278248:1
position: 2278248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2360877:1
position: 2360877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2278248-2278299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2334083-2334131:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2357033-2357286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2358133-2358366:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2360678-2360877:1:exon

LOC104305256
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104305256
note: transitional endoplasmic reticulum ATPase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2560785..2624079
location: region:2560785-2624079:1
so has part: feature:2560785-2624079:1:exon
subclass of: SO_0000010

104305256
type: Gene
SIO_000068: ncbigene

position:2560785:1
position: 2560785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2624079:1
position: 2624079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2560785-2624079:1:exon

LOC104305256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104305256
product: transitional endoplasmic reticulum ATPase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
transcript id: XM_054177732.1
SIO_010081: LOC104305256
subclass of: SO_0000673
so part of: LOC104305256
location: join(2560785..2560970,2569435..2569546,2574059..2574231,2581427..2581569,2582561..2582691,2589690..2589821,2590180..2590282,2599095..2599228,2599483..2599618,2615121..2615233,2616325..2616489,2616600..2616722,2618862..2619074,2620348..2620656,2622495..2622650,2622955..2623109,2623528..2624079)
location: region:2560785-2624079:1
so has part: feature:2560785-2560970:1:exon
so has part: feature:2569435-2569546:1:exon
so has part: feature:2574059-2574231:1:exon
so has part: feature:2581427-2581569:1:exon
so has part: feature:2582561-2582691:1:exon
so has part: feature:2589690-2589821:1:exon
so has part: feature:2590180-2590282:1:exon
so has part: feature:2599095-2599228:1:exon
so has part: feature:2599483-2599618:1:exon
so has part: feature:2615121-2615233:1:exon
so has part: feature:2616325-2616489:1:exon
so has part: feature:2616600-2616722:1:exon
so has part: feature:2618862-2619074:1:exon
so has part: feature:2620348-2620656:1:exon
so has part: feature:2622495-2622650:1:exon
so has part: feature:2622955-2623109:1:exon
so has part: feature:2623528-2624079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2560785-2560970:1:exon

position:2560970:1
position: 2560970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2569435-2569546:1:exon

position:2569435:1
position: 2569435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2569546:1
position: 2569546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2574059-2574231:1:exon

position:2574059:1
position: 2574059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2574231:1
position: 2574231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2581427-2581569:1:exon

position:2581427:1
position: 2581427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581569:1
position: 2581569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2582561-2582691:1:exon

position:2582561:1
position: 2582561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2582691:1
position: 2582691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2589690-2589821:1:exon

position:2589690:1
position: 2589690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2589821:1
position: 2589821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2590180-2590282:1:exon

position:2590180:1
position: 2590180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2590282:1
position: 2590282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2599095-2599228:1:exon

position:2599095:1
position: 2599095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2599228:1
position: 2599228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2599483-2599618:1:exon

position:2599483:1
position: 2599483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2599618:1
position: 2599618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2615121-2615233:1:exon

position:2615121:1
position: 2615121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2615233:1
position: 2615233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2616325-2616489:1:exon

position:2616325:1
position: 2616325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2616489:1
position: 2616489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2616600-2616722:1:exon

position:2616600:1
position: 2616600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2616722:1
position: 2616722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2618862-2619074:1:exon

position:2618862:1
position: 2618862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2619074:1
position: 2619074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2620348-2620656:1:exon

position:2620348:1
position: 2620348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2620656:1
position: 2620656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2622495-2622650:1:exon

position:2622495:1
position: 2622495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622650:1
position: 2622650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2622955-2623109:1:exon

position:2622955:1
position: 2622955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2623109:1
position: 2623109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2623528-2624079:1:exon

position:2623528:1
position: 2623528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104305256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104305256
product: transitional endoplasmic reticulum ATPase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_054177733.1
SIO_010081: LOC104305256
subclass of: SO_0000673
so part of: LOC104305256
location: join(2560785..2560970,2574059..2574231,2581427..2581569,2582561..2582691,2589690..2589821,2590180..2590282,2599095..2599228,2599483..2599618,2615121..2615233,2616325..2616489,2616600..2616722,2618862..2619074,2620348..2620656,2622495..2622650,2622955..2623109,2623528..2624079)
location: region:2560785-2624079:1
so has part: feature:2560785-2560970:1:exon
so has part: feature:2574059-2574231:1:exon
so has part: feature:2581427-2581569:1:exon
so has part: feature:2582561-2582691:1:exon
so has part: feature:2589690-2589821:1:exon
so has part: feature:2590180-2590282:1:exon
so has part: feature:2599095-2599228:1:exon
so has part: feature:2599483-2599618:1:exon
so has part: feature:2615121-2615233:1:exon
so has part: feature:2616325-2616489:1:exon
so has part: feature:2616600-2616722:1:exon
so has part: feature:2618862-2619074:1:exon
so has part: feature:2620348-2620656:1:exon
so has part: feature:2622495-2622650:1:exon
so has part: feature:2622955-2623109:1:exon
so has part: feature:2623528-2624079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2560785-2560970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2574059-2574231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581427-2581569:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2582561-2582691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2589690-2589821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2590180-2590282:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2599095-2599228:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2599483-2599618:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2615121-2615233:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2616325-2616489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2616600-2616722:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2618862-2619074:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2620348-2620656:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2622495-2622650:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2622955-2623109:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2623528-2624079:1:exon

LOC104305256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104305256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transitional endoplasmic reticulum ATPase isoform X1
translation: MASGSDSKVDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCADEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGTGGGSGGNVYSEDNDDDLYG
SIO_010081: LOC104305256
subclass of: SO_0000673
so part of: LOC104305256
location: join(2560954..2560970,2569435..2569546,2574059..2574231,2581427..2581569,2582561..2582691,2589690..2589821,2590180..2590282,2599095..2599228,2599483..2599618,2615121..2615233,2616325..2616489,2616600..2616722,2618862..2619074,2620348..2620656,2622495..2622650,2622955..2623109,2623528..2623633)
location: region:2560954-2623633:1
so has part: feature:2560954-2560970:1:exon
so has part: feature:2569435-2569546:1:exon
so has part: feature:2574059-2574231:1:exon
so has part: feature:2581427-2581569:1:exon
so has part: feature:2582561-2582691:1:exon
so has part: feature:2589690-2589821:1:exon
so has part: feature:2590180-2590282:1:exon
so has part: feature:2599095-2599228:1:exon
so has part: feature:2599483-2599618:1:exon
so has part: feature:2615121-2615233:1:exon
so has part: feature:2616325-2616489:1:exon
so has part: feature:2616600-2616722:1:exon
so has part: feature:2618862-2619074:1:exon
so has part: feature:2620348-2620656:1:exon
so has part: feature:2622495-2622650:1:exon
so has part: feature:2622955-2623109:1:exon
so has part: feature:2623528-2623633:1:exon

XP_054033707.1
type: Protein
SIO_000068: ncbiprotein

position:2560954:1
position: 2560954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2623633:1
position: 2623633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2560954-2560970:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2569435-2569546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2574059-2574231:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2581427-2581569:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2582561-2582691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2589690-2589821:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2590180-2590282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2599095-2599228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2599483-2599618:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2615121-2615233:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2616325-2616489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2616600-2616722:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2618862-2619074:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2620348-2620656:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2622495-2622650:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2622955-2623109:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2623528-2623633:1:exon

LOC104305256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104305256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transitional endoplasmic reticulum ATPase isoform X2
translation: MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCADEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGTGGGSGGNVYSEDNDDDLYG
SIO_010081: LOC104305256
subclass of: SO_0000673
so part of: LOC104305256
location: join(2574065..2574231,2581427..2581569,2582561..2582691,2589690..2589821,2590180..2590282,2599095..2599228,2599483..2599618,2615121..2615233,2616325..2616489,2616600..2616722,2618862..2619074,2620348..2620656,2622495..2622650,2622955..2623109,2623528..2623633)
location: region:2574065-2623633:1
so has part: feature:2574065-2574231:1:exon
so has part: feature:2581427-2581569:1:exon
so has part: feature:2582561-2582691:1:exon
so has part: feature:2589690-2589821:1:exon
so has part: feature:2590180-2590282:1:exon
so has part: feature:2599095-2599228:1:exon
so has part: feature:2599483-2599618:1:exon
so has part: feature:2615121-2615233:1:exon
so has part: feature:2616325-2616489:1:exon
so has part: feature:2616600-2616722:1:exon
so has part: feature:2618862-2619074:1:exon
so has part: feature:2620348-2620656:1:exon
so has part: feature:2622495-2622650:1:exon
so has part: feature:2622955-2623109:1:exon
so has part: feature:2623528-2623633:1:exon

XP_054033708.1
type: Protein
SIO_000068: ncbiprotein

position:2574065:1
position: 2574065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2574065-2574231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2581427-2581569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2582561-2582691:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2589690-2589821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2590180-2590282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2599095-2599228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2599483-2599618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2615121-2615233:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2616325-2616489:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2616600-2616722:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2618862-2619074:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2620348-2620656:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2622495-2622650:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2622955-2623109:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2623528-2623633:1:exon

LOC128899332
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC128899332
note: uncharacterized LOC128899332; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2821174..2836803
location: region:2821174-2836803:1
so has part: feature:2821174-2836803:1:exon
subclass of: SO_0000011

128899332
type: Gene
SIO_000068: ncbigene

position:2821174:1
position: 2821174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2836803:1
position: 2836803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2821174-2836803:1:exon

LOC128899332
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 118200
nc RNA class: lncRNA
gene: LOC128899332
product: uncharacterized LOC128899332, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008463064.1
SIO_010081: LOC128899332
subclass of: SO_0000673
so part of: LOC128899332
location: join(2821174..2821367,2822880..2823081,2836602..2836803)
location: region:2821174-2836803:1
so has part: feature:2821174-2821367:1:exon
so has part: feature:2822880-2823081:1:exon
so has part: feature:2836602-2836803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2821174-2821367:1:exon

position:2821367:1
position: 2821367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2822880-2823081:1:exon

position:2822880:1
position: 2822880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2823081:1
position: 2823081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2836602-2836803:1:exon

position:2836602:1
position: 2836602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128899332
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 118200
nc RNA class: lncRNA
gene: LOC128899332
product: uncharacterized LOC128899332, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008463063.1
SIO_010081: LOC128899332
subclass of: SO_0000673
so part of: LOC128899332
location: join(2821174..2821367,2823021..2823081,2836602..2836803)
location: region:2821174-2836803:1
so has part: feature:2821174-2821367:1:exon
so has part: feature:2823021-2823081:1:exon
so has part: feature:2836602-2836803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2821174-2821367:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2823021-2823081:1:exon

position:2823021:1
position: 2823021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2836602-2836803:1:exon

LOC104296832
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104296832
note: chromodomain-helicase-DNA-binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2841320..2876819
location: region:2841320-2876819:1
so has part: feature:2841320-2876819:1:exon
subclass of: SO_0000010

104296832
type: Gene
SIO_000068: ncbigene

position:2841320:1
position: 2841320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876819:1
position: 2876819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2841320-2876819:1:exon

LOC104296832
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104296832
product: chromodomain-helicase-DNA-binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_054177728.1
SIO_010081: LOC104296832
subclass of: SO_0000673
so part of: LOC104296832
location: join(2841320..2841391,2842667..2842734,2846088..2846225,2846511..2846764,2867948..2868173,2869097..2869197,2869456..2869634,2870124..2870251,2870333..2870549,2871130..2871219,2872014..2872204,2873392..2873580,2873749..2873911,2876589..2876819)
location: region:2841320-2876819:1
so has part: feature:2841320-2841391:1:exon
so has part: feature:2842667-2842734:1:exon
so has part: feature:2846088-2846225:1:exon
so has part: feature:2846511-2846764:1:exon
so has part: feature:2867948-2868173:1:exon
so has part: feature:2869097-2869197:1:exon
so has part: feature:2869456-2869634:1:exon
so has part: feature:2870124-2870251:1:exon
so has part: feature:2870333-2870549:1:exon
so has part: feature:2871130-2871219:1:exon
so has part: feature:2872014-2872204:1:exon
so has part: feature:2873392-2873580:1:exon
so has part: feature:2873749-2873911:1:exon
so has part: feature:2876589-2876819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2841320-2841391:1:exon

position:2841391:1
position: 2841391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2842667-2842734:1:exon

position:2842667:1
position: 2842667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2842734:1
position: 2842734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2846088-2846225:1:exon

position:2846088:1
position: 2846088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846225:1
position: 2846225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2846511-2846764:1:exon

position:2846511:1
position: 2846511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846764:1
position: 2846764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2867948-2868173:1:exon

position:2867948:1
position: 2867948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2868173:1
position: 2868173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2869097-2869197:1:exon

position:2869097:1
position: 2869097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869197:1
position: 2869197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2869456-2869634:1:exon

position:2869456:1
position: 2869456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869634:1
position: 2869634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2870124-2870251:1:exon

position:2870124:1
position: 2870124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2870251:1
position: 2870251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2870333-2870549:1:exon

position:2870333:1
position: 2870333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2870549:1
position: 2870549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2871130-2871219:1:exon

position:2871130:1
position: 2871130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871219:1
position: 2871219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2872014-2872204:1:exon

position:2872014:1
position: 2872014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2872204:1
position: 2872204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2873392-2873580:1:exon

position:2873392:1
position: 2873392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2873580:1
position: 2873580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2873749-2873911:1:exon

position:2873749:1
position: 2873749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2873911:1
position: 2873911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2876589-2876819:1:exon

position:2876589:1
position: 2876589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104296832
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104296832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 1
translation: MQRSAVLKKQEQQKSTSSDSGSEEDSSNSEGSADDSSSETEKKKHRDEDWQMSGSVSGTDSELEEDGEKSSCEDSESDYEPKSKVKSQKPPSRIELKSGKKIAGQKKRQLDSSDDDDYDKRGSRRQATVNVSYKETEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGAATTIYAVEADGDPNIGFEKSKELGEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQVVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQACIDEYFSRNQSKTTPFKDCKILKQRPRFVALKKQPSYIGGNESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQSVGEFFMPCGNTVHSKRCAGSCRLIEGKVNANRQVSCSCNLMVKKQSFKSITNRCHDSGSIEALGNPGCNAPIDCI
SIO_010081: LOC104296832
subclass of: SO_0000673
so part of: LOC104296832
location: join(2841320..2841391,2842667..2842734,2846088..2846225,2846511..2846764,2867948..2868173,2869097..2869197,2869456..2869634,2870124..2870251,2870333..2870549,2871130..2871219,2872014..2872204,2873392..2873580,2873749..2873911,2876589..2876819)
location: region:2841320-2876819:1
so has part: feature:2841320-2841391:1:exon
so has part: feature:2842667-2842734:1:exon
so has part: feature:2846088-2846225:1:exon
so has part: feature:2846511-2846764:1:exon
so has part: feature:2867948-2868173:1:exon
so has part: feature:2869097-2869197:1:exon
so has part: feature:2869456-2869634:1:exon
so has part: feature:2870124-2870251:1:exon
so has part: feature:2870333-2870549:1:exon
so has part: feature:2871130-2871219:1:exon
so has part: feature:2872014-2872204:1:exon
so has part: feature:2873392-2873580:1:exon
so has part: feature:2873749-2873911:1:exon
so has part: feature:2876589-2876819:1:exon

XP_054033703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2841320-2841391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2842667-2842734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2846088-2846225:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2846511-2846764:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2867948-2868173:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2869097-2869197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2869456-2869634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2870124-2870251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2870333-2870549:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2871130-2871219:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2872014-2872204:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2873392-2873580:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2873749-2873911:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2876589-2876819:1:exon

LOC104296831
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104296831
note: chromodomain-helicase-DNA-binding protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2897969..2943054)
location: region:2897969-2943054:-1
so has part: feature:2897969-2943054:-1:exon
subclass of: SO_0000010

104296831
type: Gene
SIO_000068: ncbigene

position:2897969:-1
position: 2897969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2943054:-1
position: 2943054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2897969-2943054:-1:exon

LOC104296831
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104296831
product: chromodomain-helicase-DNA-binding protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_054177729.1
SIO_010081: LOC104296831
subclass of: SO_0000673
so part of: LOC104296831
location: complement(join(2897969..2898932,2899131..2899341,2900297..2900354,2900557..2900653,2901194..2901372,2926524..2926655,2927081..2927332,2931345..2931479,2931842..2931964,2932829..2932979,2934693..2934831,2935247..2935377,2937782..2937823,2939169..2939329,2939534..2939710,2940717..2940812,2940903..2940999,2941276..2941424,2942056..2942205,2942968..2943054))
location: region:2897969-2943054:-1
so has part: feature:2942968-2943054:-1:exon
so has part: feature:2942056-2942205:-1:exon
so has part: feature:2941276-2941424:-1:exon
so has part: feature:2940903-2940999:-1:exon
so has part: feature:2940717-2940812:-1:exon
so has part: feature:2939534-2939710:-1:exon
so has part: feature:2939169-2939329:-1:exon
so has part: feature:2937782-2937823:-1:exon
so has part: feature:2935247-2935377:-1:exon
so has part: feature:2934693-2934831:-1:exon
so has part: feature:2932829-2932979:-1:exon
so has part: feature:2931842-2931964:-1:exon
so has part: feature:2931345-2931479:-1:exon
so has part: feature:2927081-2927332:-1:exon
so has part: feature:2926524-2926655:-1:exon
so has part: feature:2901194-2901372:-1:exon
so has part: feature:2900557-2900653:-1:exon
so has part: feature:2900297-2900354:-1:exon
so has part: feature:2899131-2899341:-1:exon
so has part: feature:2897969-2898932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2942968-2943054:-1:exon

position:2942968:-1
position: 2942968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2942056-2942205:-1:exon

position:2942056:-1
position: 2942056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2942205:-1
position: 2942205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2941276-2941424:-1:exon

position:2941276:-1
position: 2941276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2941424:-1
position: 2941424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2940903-2940999:-1:exon

position:2940903:-1
position: 2940903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940999:-1
position: 2940999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2940717-2940812:-1:exon

position:2940717:-1
position: 2940717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940812:-1
position: 2940812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2939534-2939710:-1:exon

position:2939534:-1
position: 2939534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939710:-1
position: 2939710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2939169-2939329:-1:exon

position:2939169:-1
position: 2939169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939329:-1
position: 2939329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2937782-2937823:-1:exon

position:2937782:-1
position: 2937782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2937823:-1
position: 2937823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2935247-2935377:-1:exon

position:2935247:-1
position: 2935247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2935377:-1
position: 2935377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2934693-2934831:-1:exon

position:2934693:-1
position: 2934693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2934831:-1
position: 2934831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2932829-2932979:-1:exon

position:2932829:-1
position: 2932829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2932979:-1
position: 2932979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2931842-2931964:-1:exon

position:2931842:-1
position: 2931842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2931964:-1
position: 2931964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2931345-2931479:-1:exon

position:2931345:-1
position: 2931345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2931479:-1
position: 2931479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2927081-2927332:-1:exon

position:2927081:-1
position: 2927081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2927332:-1
position: 2927332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2926524-2926655:-1:exon

position:2926524:-1
position: 2926524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2926655:-1
position: 2926655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2901194-2901372:-1:exon

position:2901194:-1
position: 2901194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901372:-1
position: 2901372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2900557-2900653:-1:exon

position:2900557:-1
position: 2900557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2900653:-1
position: 2900653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2900297-2900354:-1:exon

position:2900297:-1
position: 2900297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2900354:-1
position: 2900354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2899131-2899341:-1:exon

position:2899131:-1
position: 2899131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2899341:-1
position: 2899341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2897969-2898932:-1:exon

position:2898932:-1
position: 2898932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104296831
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104296831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 1-like
translation: MRQQYVLAAKRANCILRCIDHSITSRSTEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEEEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPEQNLRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGKRNRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEMDLRRLGELVHNGCIKALKDNSFGQERTGSRLGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDVDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRFTGAGNSKRRKTRTKKNRATKAAKIKEEIKSNSSSPPSEKSDEDDEDNEDEIVSVKQPHKKIKAEENEKKPESDFGIKKQTEEKRETKEKENKRDLKREKKEKEDKKELKNIKENGEKIKESTQKEKEVKEEKVNEIKSENKEKNKKGSLLNIPVHITATSEPVLISEELDQKTFSVCKERMRPVKSALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTSPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHSDQNISSNVNTHVIRHPDVERLKENTNHDDSSMDSYSSDRHLSQYHDHRKDRHQGDVYKKSDSRKRSYSAFSNGKDHRDWDHYKQDSRYYSDSKHRKLDDHRSRGHRSNLEGILKDSRPHSDHCSHSEHRIHSDHRSTSEYSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQWSPYGSRSPLGHRCPFEHSSDHKSTPEHTWSSWKT
SIO_010081: LOC104296831
subclass of: SO_0000673
so part of: LOC104296831
location: complement(join(2898569..2898932,2899131..2899341,2900297..2900354,2900557..2900653,2901194..2901372,2926524..2926655,2927081..2927332,2931345..2931479,2931842..2931964,2932829..2932979,2934693..2934831,2935247..2935377,2937782..2937823,2939169..2939329,2939534..2939710,2940717..2940812,2940903..2940999,2941276..2941424,2942056..2942205,2942968..2943054))
location: region:2898569-2943054:-1
so has part: feature:2942968-2943054:-1:exon
so has part: feature:2942056-2942205:-1:exon
so has part: feature:2941276-2941424:-1:exon
so has part: feature:2940903-2940999:-1:exon
so has part: feature:2940717-2940812:-1:exon
so has part: feature:2939534-2939710:-1:exon
so has part: feature:2939169-2939329:-1:exon
so has part: feature:2937782-2937823:-1:exon
so has part: feature:2935247-2935377:-1:exon
so has part: feature:2934693-2934831:-1:exon
so has part: feature:2932829-2932979:-1:exon
so has part: feature:2931842-2931964:-1:exon
so has part: feature:2931345-2931479:-1:exon
so has part: feature:2927081-2927332:-1:exon
so has part: feature:2926524-2926655:-1:exon
so has part: feature:2901194-2901372:-1:exon
so has part: feature:2900557-2900653:-1:exon
so has part: feature:2900297-2900354:-1:exon
so has part: feature:2899131-2899341:-1:exon
so has part: feature:2898569-2898932:-1:exon

XP_054033704.1
type: Protein
SIO_000068: ncbiprotein

position:2898569:-1
position: 2898569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2942968-2943054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2942056-2942205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2941276-2941424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2940903-2940999:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2940717-2940812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2939534-2939710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2939169-2939329:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2937782-2937823:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2935247-2935377:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2934693-2934831:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2932829-2932979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2931842-2931964:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2931345-2931479:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2927081-2927332:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2926524-2926655:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2901194-2901372:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2900557-2900653:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2900297-2900354:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2899131-2899341:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2898569-2898932:-1:exon

LOC104306793
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104306793
note: mesoderm induction early response protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2954338..3004247
location: region:2954338-3004247:1
so has part: feature:2954338-3004247:1:exon
subclass of: SO_0000010

104306793
type: Gene
SIO_000068: ncbigene

position:2954338:1
position: 2954338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3004247:1
position: 3004247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2954338-3004247:1:exon

LOC104306793
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104306793
product: mesoderm induction early response protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_054177734.1
SIO_010081: LOC104306793
subclass of: SO_0000673
so part of: LOC104306793
location: join(2954338..2954351,2955097..2955121,2957217..2957362,2964717..2964851,2966822..2966942,2969499..2969584,2969766..2969838,2974499..2974650,2975066..2975147,2997577..2997671,3000765..3000892,3002878..3003023,3003148..3004247)
location: region:2954338-3004247:1
so has part: feature:2954338-2954351:1:exon
so has part: feature:2955097-2955121:1:exon
so has part: feature:2957217-2957362:1:exon
so has part: feature:2964717-2964851:1:exon
so has part: feature:2966822-2966942:1:exon
so has part: feature:2969499-2969584:1:exon
so has part: feature:2969766-2969838:1:exon
so has part: feature:2974499-2974650:1:exon
so has part: feature:2975066-2975147:1:exon
so has part: feature:2997577-2997671:1:exon
so has part: feature:3000765-3000892:1:exon
so has part: feature:3002878-3003023:1:exon
so has part: feature:3003148-3004247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2954338-2954351:1:exon

position:2954351:1
position: 2954351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2955097-2955121:1:exon

position:2955097:1
position: 2955097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2955121:1
position: 2955121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2957217-2957362:1:exon

position:2957217:1
position: 2957217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2957362:1
position: 2957362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2964717-2964851:1:exon

position:2964717:1
position: 2964717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2964851:1
position: 2964851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2966822-2966942:1:exon

position:2966822:1
position: 2966822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2966942:1
position: 2966942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2969499-2969584:1:exon

position:2969499:1
position: 2969499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2969584:1
position: 2969584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2969766-2969838:1:exon

position:2969766:1
position: 2969766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2969838:1
position: 2969838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2974499-2974650:1:exon

position:2974499:1
position: 2974499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2974650:1
position: 2974650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2975066-2975147:1:exon

position:2975066:1
position: 2975066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2975147:1
position: 2975147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2997577-2997671:1:exon

position:2997577:1
position: 2997577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2997671:1
position: 2997671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3000765-3000892:1:exon

position:3000765:1
position: 3000765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3000892:1
position: 3000892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3002878-3003023:1:exon

position:3002878:1
position: 3002878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3003023:1
position: 3003023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3003148-3004247:1:exon

position:3003148:1
position: 3003148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104306793
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104306793
product: mesoderm induction early response protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_054177735.1
SIO_010081: LOC104306793
subclass of: SO_0000673
so part of: LOC104306793
location: join(2954338..2954351,2955097..2955121,2957217..2957362,2964717..2964851,2966822..2966942,2969499..2969584,2969766..2969838,2974499..2974650,2975066..2975147,2997580..2997671,3000765..3000892,3002878..3003023,3003148..3004247)
location: region:2954338-3004247:1
so has part: feature:2954338-2954351:1:exon
so has part: feature:2955097-2955121:1:exon
so has part: feature:2957217-2957362:1:exon
so has part: feature:2964717-2964851:1:exon
so has part: feature:2966822-2966942:1:exon
so has part: feature:2969499-2969584:1:exon
so has part: feature:2969766-2969838:1:exon
so has part: feature:2974499-2974650:1:exon
so has part: feature:2975066-2975147:1:exon
so has part: feature:2997580-2997671:1:exon
so has part: feature:3000765-3000892:1:exon
so has part: feature:3002878-3003023:1:exon
so has part: feature:3003148-3004247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2954338-2954351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2955097-2955121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2957217-2957362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2964717-2964851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2966822-2966942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2969499-2969584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2969766-2969838:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2974499-2974650:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2975066-2975147:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2997580-2997671:1:exon

position:2997580:1
position: 2997580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3000765-3000892:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3002878-3003023:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3003148-3004247:1:exon

LOC104306793
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104306793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 3 isoform X1
translation: MAEASFGSSSPVGSLSSEDHDFDPSAEMLVHDYDDERTLEEEEMMEEKKRFSSEIEDLEKEGNMPLEDLLAFYGYEPAIPVIAGSSVDSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSSADDLTPSVTSHEANDFFPRPLRSNTACDGDKESDSEDVEADNGNSSEDLRKEIMVGSQYQAEIPPYLGRYSDNEKVYENEDHLLWKPDVISESKVKEYLLETSLRTGNKNMIGRIPEGLHTRDNEQALYELLKSSHNIKEAFERYCSNGKSSQEEMTAWTEEECRSFEHALLIYGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDEAEALGGAVRSSALTSNTRTETVPDQQLSILNSITTNELTALTNSVATVCHSSDVNCLDDAFTPMDNLPRAPVNHVPIGTEELLNLPSNGESDCFNLFETGFYHSELNQMNMCSEEMERPAKRLKMGIAVPESFMNDVSVNNLGVDFENHTHHITSAKMAVSVADFSNLSANETNGFINTHALHEHSALHSE
SIO_010081: LOC104306793
subclass of: SO_0000673
so part of: LOC104306793
location: join(2954343..2954351,2955097..2955121,2957217..2957362,2964717..2964851,2966822..2966942,2969499..2969584,2969766..2969838,2974499..2974650,2975066..2975147,2997577..2997671,3000765..3000892,3002878..3003023,3003148..3003605)
location: region:2954343-3003605:1
so has part: feature:2954343-2954351:1:exon
so has part: feature:2955097-2955121:1:exon
so has part: feature:2957217-2957362:1:exon
so has part: feature:2964717-2964851:1:exon
so has part: feature:2966822-2966942:1:exon
so has part: feature:2969499-2969584:1:exon
so has part: feature:2969766-2969838:1:exon
so has part: feature:2974499-2974650:1:exon
so has part: feature:2975066-2975147:1:exon
so has part: feature:2997577-2997671:1:exon
so has part: feature:3000765-3000892:1:exon
so has part: feature:3002878-3003023:1:exon
so has part: feature:3003148-3003605:1:exon

XP_054033709.1
type: Protein
SIO_000068: ncbiprotein

position:2954343:1
position: 2954343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3003605:1
position: 3003605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2954343-2954351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2955097-2955121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2957217-2957362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2964717-2964851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2966822-2966942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2969499-2969584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2969766-2969838:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2974499-2974650:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2975066-2975147:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2997577-2997671:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3000765-3000892:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3002878-3003023:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3003148-3003605:1:exon

LOC104306793
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104306793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 3 isoform X2
translation: MAEASFGSSSPVGSLSSEDHDFDPSAEMLVHDYDDERTLEEEEMMEEKKRFSSEIEDLEKEGNMPLEDLLAFYGYEPAIPVIAGSSVDSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSSADDLTPSVTSHEANDFFPRPLRSNTACDGDKESDSEDVEADNGNSSEDLRKEIMVGSQYQAEIPPYLGRYSDNEKVYENEDHLLWKPDVISESKVKEYLLETSLRTGNKNMIGRIPEGLHTRDNEQALYELLKSSHNIKEAFERYCSNGKSSQEMTAWTEEECRSFEHALLIYGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDEAEALGGAVRSSALTSNTRTETVPDQQLSILNSITTNELTALTNSVATVCHSSDVNCLDDAFTPMDNLPRAPVNHVPIGTEELLNLPSNGESDCFNLFETGFYHSELNQMNMCSEEMERPAKRLKMGIAVPESFMNDVSVNNLGVDFENHTHHITSAKMAVSVADFSNLSANETNGFINTHALHEHSALHSE
SIO_010081: LOC104306793
subclass of: SO_0000673
so part of: LOC104306793
location: join(2954343..2954351,2955097..2955121,2957217..2957362,2964717..2964851,2966822..2966942,2969499..2969584,2969766..2969838,2974499..2974650,2975066..2975147,2997580..2997671,3000765..3000892,3002878..3003023,3003148..3003605)
location: region:2954343-3003605:1
so has part: feature:2954343-2954351:1:exon
so has part: feature:2955097-2955121:1:exon
so has part: feature:2957217-2957362:1:exon
so has part: feature:2964717-2964851:1:exon
so has part: feature:2966822-2966942:1:exon
so has part: feature:2969499-2969584:1:exon
so has part: feature:2969766-2969838:1:exon
so has part: feature:2974499-2974650:1:exon
so has part: feature:2975066-2975147:1:exon
so has part: feature:2997580-2997671:1:exon
so has part: feature:3000765-3000892:1:exon
so has part: feature:3002878-3003023:1:exon
so has part: feature:3003148-3003605:1:exon

XP_054033710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2954343-2954351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2955097-2955121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2957217-2957362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2964717-2964851:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2966822-2966942:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2969499-2969584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2969766-2969838:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2974499-2974650:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2975066-2975147:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2997580-2997671:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3000765-3000892:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3002878-3003023:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3003148-3003605:1:exon

LOC104306793
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104306793
product: mesoderm induction early response protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_054177736.1
SIO_010081: LOC104306793
subclass of: SO_0000673
so part of: LOC104306793
location: join(2960283..2961116,2964717..2964851,2966822..2966942,2969499..2969584,2969766..2969838,2974499..2974650,2975066..2975147,2997577..2997671,3000765..3000892,3002878..3003023,3003148..3004247)
location: region:2960283-3004247:1
so has part: feature:2960283-2961116:1:exon
so has part: feature:2964717-2964851:1:exon
so has part: feature:2966822-2966942:1:exon
so has part: feature:2969499-2969584:1:exon
so has part: feature:2969766-2969838:1:exon
so has part: feature:2974499-2974650:1:exon
so has part: feature:2975066-2975147:1:exon
so has part: feature:2997577-2997671:1:exon
so has part: feature:3000765-3000892:1:exon
so has part: feature:3002878-3003023:1:exon
so has part: feature:3003148-3004247:1:exon

position:2960283:1
position: 2960283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2960283-2961116:1:exon

position:2961116:1
position: 2961116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2964717-2964851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2966822-2966942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2969499-2969584:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2969766-2969838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2974499-2974650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2975066-2975147:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2997577-2997671:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3000765-3000892:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3002878-3003023:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3003148-3004247:1:exon

LOC104306793
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104306793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesoderm induction early response protein 3 isoform X3
translation: MPLEDLLAFYGYEPAIPVIAGSSVDSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSSADDLTPSVTSHEANDFFPRPLRSNTACDGDKESDSEDVEADNGNSSEDLRKEIMVGSQYQAEIPPYLGRYSDNEKVYENEDHLLWKPDVISESKVKEYLLETSLRTGNKNMIGRIPEGLHTRDNEQALYELLKSSHNIKEAFERYCSNGKSSQEEMTAWTEEECRSFEHALLIYGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYMDRLVDEAEALGGAVRSSALTSNTRTETVPDQQLSILNSITTNELTALTNSVATVCHSSDVNCLDDAFTPMDNLPRAPVNHVPIGTEELLNLPSNGESDCFNLFETGFYHSELNQMNMCSEEMERPAKRLKMGIAVPESFMNDVSVNNLGVDFENHTHHITSAKMAVSVADFSNLSANETNGFINTHALHEHSALHSE
SIO_010081: LOC104306793
subclass of: SO_0000673
so part of: LOC104306793
location: join(2964726..2964851,2966822..2966942,2969499..2969584,2969766..2969838,2974499..2974650,2975066..2975147,2997577..2997671,3000765..3000892,3002878..3003023,3003148..3003605)
location: region:2964726-3003605:1
so has part: feature:2964726-2964851:1:exon
so has part: feature:2966822-2966942:1:exon
so has part: feature:2969499-2969584:1:exon
so has part: feature:2969766-2969838:1:exon
so has part: feature:2974499-2974650:1:exon
so has part: feature:2975066-2975147:1:exon
so has part: feature:2997577-2997671:1:exon
so has part: feature:3000765-3000892:1:exon
so has part: feature:3002878-3003023:1:exon
so has part: feature:3003148-3003605:1:exon

XP_054033711.1
type: Protein
SIO_000068: ncbiprotein

position:2964726:1
position: 2964726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2964726-2964851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2966822-2966942:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2969499-2969584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2969766-2969838:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2974499-2974650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2975066-2975147:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2997577-2997671:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3000765-3000892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3002878-3003023:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3003148-3003605:1:exon

LOC104299612
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC104299612
note: zinc finger RNA-binding protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3339999..3475816)
location: region:3339999-3475816:-1
so has part: feature:3339999-3475816:-1:exon
subclass of: SO_0000010

104299612
type: Gene
SIO_000068: ncbigene

position:3339999:-1
position: 3339999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3475816:-1
position: 3475816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3339999-3475816:-1:exon

LOC104299612
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC104299612
product: zinc finger RNA-binding protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_054177720.1
SIO_010081: LOC104299612
subclass of: SO_0000673
so part of: LOC104299612
location: complement(join(3339999..3340392,3341060..3341157,3341268..3341379,3346332..3346427,3347216..3347313,3368834..3368975,3371723..3371873,3372103..3372308,3376074..3376236,3377593..3377738,3379202..3379321,3424172..3424362,3425144..3425444,3427894..3428085,3429637..3429884,3458903..3459121,3459928..3460072,3464137..3464419,3475392..3475476,3475738..3475816))
location: region:3339999-3475816:-1
so has part: feature:3475738-3475816:-1:exon
so has part: feature:3475392-3475476:-1:exon
so has part: feature:3464137-3464419:-1:exon
so has part: feature:3459928-3460072:-1:exon
so has part: feature:3458903-3459121:-1:exon
so has part: feature:3429637-3429884:-1:exon
so has part: feature:3427894-3428085:-1:exon
so has part: feature:3425144-3425444:-1:exon
so has part: feature:3424172-3424362:-1:exon
so has part: feature:3379202-3379321:-1:exon
so has part: feature:3377593-3377738:-1:exon
so has part: feature:3376074-3376236:-1:exon
so has part: feature:3372103-3372308:-1:exon
so has part: feature:3371723-3371873:-1:exon
so has part: feature:3368834-3368975:-1:exon
so has part: feature:3347216-3347313:-1:exon
so has part: feature:3346332-3346427:-1:exon
so has part: feature:3341268-3341379:-1:exon
so has part: feature:3341060-3341157:-1:exon
so has part: feature:3339999-3340392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3475738-3475816:-1:exon

position:3475738:-1
position: 3475738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3475392-3475476:-1:exon

position:3475392:-1
position: 3475392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3475476:-1
position: 3475476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3464137-3464419:-1:exon

position:3464137:-1
position: 3464137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3464419:-1
position: 3464419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3459928-3460072:-1:exon

position:3459928:-1
position: 3459928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3460072:-1
position: 3460072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3458903-3459121:-1:exon

position:3458903:-1
position: 3458903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3459121:-1
position: 3459121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3429637-3429884:-1:exon

position:3429637:-1
position: 3429637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3429884:-1
position: 3429884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3427894-3428085:-1:exon

position:3427894:-1
position: 3427894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3428085:-1
position: 3428085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3425144-3425444:-1:exon

position:3425144:-1
position: 3425144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3425444:-1
position: 3425444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3424172-3424362:-1:exon

position:3424172:-1
position: 3424172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3424362:-1
position: 3424362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3379202-3379321:-1:exon

position:3379202:-1
position: 3379202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3379321:-1
position: 3379321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3377593-3377738:-1:exon

position:3377593:-1
position: 3377593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3377738:-1
position: 3377738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3376074-3376236:-1:exon

position:3376074:-1
position: 3376074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3376236:-1
position: 3376236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3372103-3372308:-1:exon

position:3372103:-1
position: 3372103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3372308:-1
position: 3372308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3371723-3371873:-1:exon

position:3371723:-1
position: 3371723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371873:-1
position: 3371873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3368834-3368975:-1:exon

position:3368834:-1
position: 3368834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3368975:-1
position: 3368975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3347216-3347313:-1:exon

position:3347216:-1
position: 3347216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3347313:-1
position: 3347313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3346332-3346427:-1:exon

position:3346332:-1
position: 3346332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3346427:-1
position: 3346427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3341268-3341379:-1:exon

position:3341268:-1
position: 3341268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3341379:-1
position: 3341379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3341060-3341157:-1:exon

position:3341060:-1
position: 3341060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3341157:-1
position: 3341157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3339999-3340392:-1:exon

position:3340392:-1
position: 3340392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104299612
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC104299612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger RNA-binding protein-like
translation: MIPICPVVSFTYVPSRLGENAKMATSNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTTHTATDYGYTQRQQEAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAASAQPQPSVAESYYQTAPKAGYTQGATQYTQAQQTRQVTAIKPATPSPGTTTFSIYPVSSTVQPVAAAATVVPSYTQNATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQKQAVAAAAAAATAAWTGTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEATLKASQNTNNSSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVGIQATSSTSASVSKPTASVSNIATTSSTVNSSVVSSAVKVLTPAAHAPLNMASSNKTSSTTPHIAVKKISTPKINFVGKYRSGNKLQTTGSKLEEMKSAESFKTAAATVQTQEVKLDTAAEPVTPTALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYWRRMEEEQHHWDDRRRIPDGGYPHGLPGPLGLVGVRPGMPPQPQGPTPLRRPDSSDDRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMIEHEKSKSKEEDDKKDGSKDRALKGVLRVGVLAKGLLLRGDRNVSLVLLCTEKPSKMLLSRIAESLPKQLAVISPEKYNIKCAVPEAAIILNSCVEPKMQVTITLTSPVIREENMRDGDITSGMVKDPPDVLDRQKCLDALAALRHAKWFQARANGLQSCVVIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQLALRLFAFRQIYKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
SIO_010081: LOC104299612
subclass of: SO_0000673
so part of: LOC104299612
location: complement(join(3340213..3340392,3341060..3341157,3341268..3341379,3346332..3346427,3347216..3347313,3368834..3368975,3371723..3371873,3372103..3372308,3376074..3376236,3377593..3377738,3379202..3379321,3424172..3424362,3425144..3425444,3427894..3428085,3429637..3429884,3458903..3459121,3459928..3460072,3464137..3464419,3475392..3475476,3475738..3475774))
location: region:3340213-3475774:-1
so has part: feature:3475738-3475774:-1:exon
so has part: feature:3475392-3475476:-1:exon
so has part: feature:3464137-3464419:-1:exon
so has part: feature:3459928-3460072:-1:exon
so has part: feature:3458903-3459121:-1:exon
so has part: feature:3429637-3429884:-1:exon
so has part: feature:3427894-3428085:-1:exon
so has part: feature:3425144-3425444:-1:exon
so has part: feature:3424172-3424362:-1:exon
so has part: feature:3379202-3379321:-1:exon
so has part: feature:3377593-3377738:-1:exon
so has part: feature:3376074-3376236:-1:exon
so has part: feature:3372103-3372308:-1:exon
so has part: feature:3371723-3371873:-1:exon
so has part: feature:3368834-3368975:-1:exon
so has part: feature:3347216-3347313:-1:exon
so has part: feature:3346332-3346427:-1:exon
so has part: feature:3341268-3341379:-1:exon
so has part: feature:3341060-3341157:-1:exon
so has part: feature:3340213-3340392:-1:exon

XP_054033695.1
type: Protein
SIO_000068: ncbiprotein

position:3340213:-1
position: 3340213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3475774:-1
position: 3475774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3475738-3475774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3475392-3475476:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3464137-3464419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3459928-3460072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3458903-3459121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3429637-3429884:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3427894-3428085:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3425144-3425444:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3424172-3424362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3379202-3379321:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3377593-3377738:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3376074-3376236:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3372103-3372308:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3371723-3371873:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3368834-3368975:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3347216-3347313:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3346332-3346427:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3341268-3341379:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3341060-3341157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3340213-3340392:-1:exon

LOC128899333
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC128899333
note: small nucleolar RNA SNORA66; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3467558..3467665)
location: region:3467558-3467665:-1
so has part: feature:3467558-3467665:-1:exon
subclass of: SO_0000578

128899333
type: Gene
SIO_000068: ncbigene

position:3467558:-1
position: 3467558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3467665:-1
position: 3467665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3467558-3467665:-1:exon

LOC128899333
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 118200
nc RNA class: snoRNA
gene: LOC128899333
product: small nucleolar RNA SNORA66
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00155
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_008463066.1
SIO_010081: LOC128899333
subclass of: SO_0000673
so part of: LOC128899333
location: complement(3467558..3467665)
location: region:3467558-3467665:-1
so has part: feature:3467558-3467665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3467558-3467665:-1:exon

LOC128899331
type: Gene
subclass of: SO_0000704
RO_0002162: 118200
gene: LOC128899331
note: activated RNA polymerase II transcriptional coactivator p15-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3715045..3804368
location: region:3715045-3804368:1
so has part: feature:3715045-3804368:1:exon
subclass of: SO_0000010

128899331
type: Gene
SIO_000068: ncbigene

position:3715045:1
position: 3715045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3804368:1
position: 3804368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3715045-3804368:1:exon

LOC128899331
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 118200
gene: LOC128899331
product: activated RNA polymerase II transcriptional coactivator p15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_054177730.1
SIO_010081: LOC128899331
subclass of: SO_0000673
so part of: LOC128899331
location: join(3715045..3715167,3716978..3717050,3718451..3718570,3754116..3754224,3803856..3804368)
location: region:3715045-3804368:1
so has part: feature:3715045-3715167:1:exon
so has part: feature:3716978-3717050:1:exon
so has part: feature:3718451-3718570:1:exon
so has part: feature:3754116-3754224:1:exon
so has part: feature:3803856-3804368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3715045-3715167:1:exon

position:3715167:1
position: 3715167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3716978-3717050:1:exon

position:3716978:1
position: 3716978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3717050:1
position: 3717050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3718451-3718570:1:exon

position:3718451:1
position: 3718451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3718570:1
position: 3718570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3754116-3754224:1:exon

position:3754116:1
position: 3754116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3754224:1
position: 3754224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3803856-3804368:1:exon

position:3803856:1
position: 3803856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128899331
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 118200
gene: LOC128899331
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activated RNA polymerase II transcriptional coactivator p15-like
translation: MPKSKEIVSSSSTASDSDSEVDKKAKRKKQVTPEKPVKKQKTGESSKGAASSKQSSNRDENMFQIGKMRYVSVRDFKGKVLIDIREYWMDHEGEMKPGRKGISLNPEQWNQLKEQISDIDDAVRKL
SIO_010081: LOC128899331
subclass of: SO_0000673
so part of: LOC128899331
location: join(3716979..3717050,3718451..3718570,3754116..3754224,3803856..3803935)
location: region:3716979-3803935:1
so has part: feature:3716979-3717050:1:exon
so has part: feature:3718451-3718570:1:exon
so has part: feature:3754116-3754224:1:exon
so has part: feature:3803856-3803935:1:exon

XP_054033705.1
type: Protein
SIO_000068: ncbiprotein

position:3716979:1
position: 3716979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3803935:1
position: 3803935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3716979-3717050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3718451-3718570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3754116-3754224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3803856-3803935:1:exon